Multiple sequence alignment - TraesCS2B01G549900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G549900 chr2B 100.000 3268 0 0 1 3268 746034425 746031158 0.000000e+00 6035.0
1 TraesCS2B01G549900 chr2B 91.747 727 47 5 648 1373 382580611 382579897 0.000000e+00 998.0
2 TraesCS2B01G549900 chr2B 86.344 454 39 12 1 447 382581249 382580812 1.060000e-129 473.0
3 TraesCS2B01G549900 chr2B 92.949 312 20 2 1638 1947 382579461 382579150 1.380000e-123 453.0
4 TraesCS2B01G549900 chr2B 92.715 302 22 0 1342 1643 382579853 382579552 1.390000e-118 436.0
5 TraesCS2B01G549900 chr2B 94.286 70 3 1 574 642 382580815 382580746 4.460000e-19 106.0
6 TraesCS2B01G549900 chr2B 97.778 45 1 0 2937 2981 382581400 382581444 9.720000e-11 78.7
7 TraesCS2B01G549900 chr2B 100.000 42 0 0 2937 2978 746034578 746034619 9.720000e-11 78.7
8 TraesCS2B01G549900 chr6B 93.756 993 61 1 648 1640 558743042 558744033 0.000000e+00 1489.0
9 TraesCS2B01G549900 chr6B 93.656 993 62 1 648 1640 558825625 558826616 0.000000e+00 1483.0
10 TraesCS2B01G549900 chr6B 94.317 827 46 1 791 1617 558904089 558904914 0.000000e+00 1266.0
11 TraesCS2B01G549900 chr6B 92.710 631 41 4 1638 2265 558744125 558744753 0.000000e+00 905.0
12 TraesCS2B01G549900 chr6B 92.710 631 41 4 1638 2265 558826708 558827336 0.000000e+00 905.0
13 TraesCS2B01G549900 chr6B 88.615 650 51 12 1 642 558824856 558825490 0.000000e+00 769.0
14 TraesCS2B01G549900 chr6B 88.462 650 52 12 1 642 558903212 558903846 0.000000e+00 763.0
15 TraesCS2B01G549900 chr6B 88.000 650 55 12 1 642 558742273 558742907 0.000000e+00 747.0
16 TraesCS2B01G549900 chr6B 91.005 378 26 3 2613 2982 558905512 558905889 1.350000e-138 503.0
17 TraesCS2B01G549900 chr6B 90.741 378 26 4 2613 2982 558833255 558833631 2.260000e-136 496.0
18 TraesCS2B01G549900 chr6B 90.476 378 28 3 2613 2982 558750505 558750882 2.930000e-135 492.0
19 TraesCS2B01G549900 chr6B 91.743 109 9 0 648 756 558903981 558904089 5.650000e-33 152.0
20 TraesCS2B01G549900 chr6B 93.671 79 5 0 2540 2618 558744750 558744828 5.730000e-23 119.0
21 TraesCS2B01G549900 chrUn 92.563 632 41 5 1638 2265 433958003 433958632 0.000000e+00 902.0
22 TraesCS2B01G549900 chrUn 92.033 364 25 1 2623 2982 326519177 326519540 2.910000e-140 508.0
23 TraesCS2B01G549900 chrUn 95.420 262 12 0 1379 1640 433957650 433957911 5.040000e-113 418.0
24 TraesCS2B01G549900 chrUn 93.269 208 10 1 2779 2982 436084717 436084924 1.470000e-78 303.0
25 TraesCS2B01G549900 chrUn 94.521 146 8 0 2837 2982 318966832 318966977 3.280000e-55 226.0
26 TraesCS2B01G549900 chrUn 93.671 79 5 0 2540 2618 433958629 433958707 5.730000e-23 119.0
27 TraesCS2B01G549900 chrUn 78.889 180 33 5 465 643 296012911 296013086 2.060000e-22 117.0
28 TraesCS2B01G549900 chr1B 85.294 714 69 15 648 1330 392739570 392740278 0.000000e+00 704.0
29 TraesCS2B01G549900 chr1B 88.629 299 28 6 1661 1956 392740641 392740936 3.100000e-95 359.0
30 TraesCS2B01G549900 chr1B 81.377 494 38 26 2526 2980 392741151 392741629 1.440000e-93 353.0
31 TraesCS2B01G549900 chr1B 78.889 180 33 5 465 643 395257968 395258143 2.060000e-22 117.0
32 TraesCS2B01G549900 chr1B 78.333 180 34 5 465 643 395248462 395248637 9.590000e-21 111.0
33 TraesCS2B01G549900 chr2A 85.162 647 62 14 648 1263 742296227 742296870 1.650000e-177 632.0
34 TraesCS2B01G549900 chr2A 88.411 302 29 6 1658 1956 742298362 742298660 3.100000e-95 359.0
35 TraesCS2B01G549900 chr2A 81.881 436 34 21 2589 2982 742298923 742299355 3.140000e-85 326.0
36 TraesCS2B01G549900 chr2A 85.490 255 27 5 1395 1640 742298010 742298263 1.160000e-64 257.0
37 TraesCS2B01G549900 chr2A 94.231 52 3 0 1342 1393 3793065 3793116 2.700000e-11 80.5
38 TraesCS2B01G549900 chr1D 83.380 710 73 17 648 1330 416983252 416983943 1.670000e-172 616.0
39 TraesCS2B01G549900 chr1D 86.184 304 35 6 1658 1956 416984306 416984607 4.070000e-84 322.0
40 TraesCS2B01G549900 chr1D 78.889 180 31 5 465 643 293908922 293909095 7.410000e-22 115.0
41 TraesCS2B01G549900 chr1D 88.312 77 8 1 648 723 457149230 457149306 1.250000e-14 91.6
42 TraesCS2B01G549900 chr3B 87.736 212 23 3 3058 3268 107636923 107636714 9.060000e-61 244.0
43 TraesCS2B01G549900 chr3D 87.560 209 21 1 3056 3264 339836088 339835885 1.520000e-58 237.0
44 TraesCS2B01G549900 chr2D 83.045 289 20 13 2980 3268 611157694 611157435 5.450000e-58 235.0
45 TraesCS2B01G549900 chr1A 82.258 124 22 0 465 588 366270443 366270566 1.240000e-19 108.0
46 TraesCS2B01G549900 chr1A 89.610 77 7 1 648 723 549843572 549843648 2.680000e-16 97.1
47 TraesCS2B01G549900 chr5A 95.918 49 2 0 1342 1390 3294970 3295018 2.700000e-11 80.5
48 TraesCS2B01G549900 chr3A 92.727 55 4 0 1335 1389 594519644 594519698 2.700000e-11 80.5
49 TraesCS2B01G549900 chr4A 88.710 62 5 2 1344 1404 472397922 472397982 1.260000e-09 75.0
50 TraesCS2B01G549900 chr4B 85.714 63 5 3 3056 3114 606840573 606840511 2.720000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G549900 chr2B 746031158 746034425 3267 True 6035.000000 6035 100.000000 1 3268 1 chr2B.!!$R1 3267
1 TraesCS2B01G549900 chr2B 382579150 382581249 2099 True 493.200000 998 91.608200 1 1947 5 chr2B.!!$R2 1946
2 TraesCS2B01G549900 chr6B 558824856 558827336 2480 False 1052.333333 1483 91.660333 1 2265 3 chr6B.!!$F4 2264
3 TraesCS2B01G549900 chr6B 558742273 558744828 2555 False 815.000000 1489 92.034250 1 2618 4 chr6B.!!$F3 2617
4 TraesCS2B01G549900 chr6B 558903212 558905889 2677 False 671.000000 1266 91.381750 1 2982 4 chr6B.!!$F5 2981
5 TraesCS2B01G549900 chrUn 433957650 433958707 1057 False 479.666667 902 93.884667 1379 2618 3 chrUn.!!$F5 1239
6 TraesCS2B01G549900 chr1B 392739570 392741629 2059 False 472.000000 704 85.100000 648 2980 3 chr1B.!!$F3 2332
7 TraesCS2B01G549900 chr2A 742296227 742299355 3128 False 393.500000 632 85.236000 648 2982 4 chr2A.!!$F2 2334
8 TraesCS2B01G549900 chr1D 416983252 416984607 1355 False 469.000000 616 84.782000 648 1956 2 chr1D.!!$F3 1308

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
407 415 0.035317 TTGCGTCAGGAGACAAGCAT 59.965 50.0 0.0 0.0 45.23 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2319 3996 1.545841 TGATAGTGCTCTGTCACCGT 58.454 50.0 10.71 0.0 37.0 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.817396 GCTCAGGTGCGCTCCTTC 60.817 66.667 27.69 15.76 35.37 3.46
28 29 2.747855 GTGCGCTCCTTCCCCTTG 60.748 66.667 9.73 0.00 0.00 3.61
38 39 1.460689 TTCCCCTTGTCCCAGTCGT 60.461 57.895 0.00 0.00 0.00 4.34
43 44 2.027625 CTTGTCCCAGTCGTTCGCC 61.028 63.158 0.00 0.00 0.00 5.54
44 45 3.851845 TTGTCCCAGTCGTTCGCCG 62.852 63.158 0.00 0.00 38.13 6.46
119 126 0.605319 TTCCGCAGTCGCCATTTTCT 60.605 50.000 0.00 0.00 33.11 2.52
122 129 0.729116 CGCAGTCGCCATTTTCTCAT 59.271 50.000 0.00 0.00 33.11 2.90
124 131 1.739466 GCAGTCGCCATTTTCTCATCA 59.261 47.619 0.00 0.00 0.00 3.07
125 132 2.476854 GCAGTCGCCATTTTCTCATCAC 60.477 50.000 0.00 0.00 0.00 3.06
126 133 2.096496 CAGTCGCCATTTTCTCATCACC 59.904 50.000 0.00 0.00 0.00 4.02
127 134 1.401905 GTCGCCATTTTCTCATCACCC 59.598 52.381 0.00 0.00 0.00 4.61
128 135 0.740737 CGCCATTTTCTCATCACCCC 59.259 55.000 0.00 0.00 0.00 4.95
129 136 1.114627 GCCATTTTCTCATCACCCCC 58.885 55.000 0.00 0.00 0.00 5.40
167 175 1.144936 CGATCACCTCTTCTGCCCC 59.855 63.158 0.00 0.00 0.00 5.80
194 202 2.035442 GTCTGCAACGGGGAAGAGC 61.035 63.158 0.00 0.00 0.00 4.09
200 208 2.207924 AACGGGGAAGAGCGACAGT 61.208 57.895 0.00 0.00 0.00 3.55
227 235 2.738139 CCACACGACGCTGATGCA 60.738 61.111 0.00 0.00 39.64 3.96
285 293 7.601508 ACTGATTCTTTTTGAGATTCATTTGGC 59.398 33.333 2.30 0.00 41.45 4.52
289 297 2.925578 TTGAGATTCATTTGGCTGCG 57.074 45.000 0.00 0.00 0.00 5.18
316 324 0.256752 TGATCTGTCCATTGCTGGGG 59.743 55.000 0.00 0.00 43.34 4.96
339 347 8.318412 GGGGTTGGTTTATTGATTTGTATTTCT 58.682 33.333 0.00 0.00 0.00 2.52
350 358 9.696917 ATTGATTTGTATTTCTGTTCAACTTCC 57.303 29.630 0.00 0.00 0.00 3.46
359 367 6.377327 TTCTGTTCAACTTCCATTGTTCTC 57.623 37.500 0.00 0.00 0.00 2.87
407 415 0.035317 TTGCGTCAGGAGACAAGCAT 59.965 50.000 0.00 0.00 45.23 3.79
422 430 3.113745 CATTGCCCTGATGCGGTC 58.886 61.111 0.00 0.00 0.00 4.79
431 439 1.135527 CCTGATGCGGTCGTAGGTAAA 59.864 52.381 0.00 0.00 0.00 2.01
441 449 5.350633 CGGTCGTAGGTAAACATTGGATAA 58.649 41.667 0.00 0.00 0.00 1.75
442 450 5.987347 CGGTCGTAGGTAAACATTGGATAAT 59.013 40.000 0.00 0.00 0.00 1.28
490 498 9.466497 AATGAACATATACATGTGAGGAAGTTT 57.534 29.630 9.11 0.00 44.83 2.66
521 529 5.815581 TCCAATACTAAGCAACCAATCAGT 58.184 37.500 0.00 0.00 0.00 3.41
539 547 5.654603 TCAGTATACAGGTAGTTGGTGTG 57.345 43.478 5.50 0.00 0.00 3.82
541 549 2.781681 ATACAGGTAGTTGGTGTGGC 57.218 50.000 0.00 0.00 0.00 5.01
542 550 0.319083 TACAGGTAGTTGGTGTGGCG 59.681 55.000 0.00 0.00 0.00 5.69
572 580 4.644685 GGCCTTCAGGAAATACTGCATTTA 59.355 41.667 0.00 0.00 36.96 1.40
576 584 8.579863 GCCTTCAGGAAATACTGCATTTATAAT 58.420 33.333 0.00 0.00 36.96 1.28
634 643 7.013559 TGCATTTTCAGATACCCATGAAGTATG 59.986 37.037 11.68 2.84 36.81 2.39
711 852 8.567948 CAACAACTAAAACTGACAATATGGACT 58.432 33.333 0.00 0.00 0.00 3.85
724 865 5.222337 ACAATATGGACTCCCTGGTTTCTTT 60.222 40.000 0.00 0.00 0.00 2.52
805 947 7.615365 TGCCCTGTATAAAGTCAATTTGAGAAT 59.385 33.333 0.00 0.00 32.01 2.40
826 968 9.243637 GAGAATAATCATGACTAGAGTGACAAC 57.756 37.037 0.00 0.00 0.00 3.32
848 990 3.306472 TGTTTAAGCCTGGTTGGAAGT 57.694 42.857 0.00 0.00 38.35 3.01
872 1014 9.160496 AGTACATCTTCTGAATGAATCAAAGTC 57.840 33.333 0.00 0.00 37.67 3.01
890 1032 1.137086 GTCAGCTCGAGGCCAAGATAA 59.863 52.381 15.58 0.00 43.05 1.75
891 1033 1.831106 TCAGCTCGAGGCCAAGATAAA 59.169 47.619 15.58 0.00 43.05 1.40
971 1118 1.523095 GCTATCTTTGACATCGACGGC 59.477 52.381 0.00 0.00 0.00 5.68
1019 1166 2.716424 TGATGGAAGAACAAAGGGGAGT 59.284 45.455 0.00 0.00 0.00 3.85
1033 1180 4.200283 GAGTCCTCCTCGCTGCGG 62.200 72.222 23.03 12.57 0.00 5.69
1095 1242 1.260561 CAAGTACACAACTGTCGTGGC 59.739 52.381 3.67 0.00 38.88 5.01
1219 1387 9.922477 TGTAGGAATCTAGAGTTGATTTCTCTA 57.078 33.333 0.00 0.00 39.62 2.43
1284 1453 6.726490 ATGGATGATTTGAAATCCTCAAGG 57.274 37.500 19.82 0.00 44.84 3.61
1326 1857 8.668353 TGATTGTTTCTTTGATCTGCTATACAC 58.332 33.333 0.00 0.00 0.00 2.90
1459 2718 9.736023 CTTCACAAAAGAAGCTACAACTTTATT 57.264 29.630 0.00 0.00 38.64 1.40
1527 2791 7.973388 TCAAGTAAAAGAACACAATCTGTTTGG 59.027 33.333 3.74 0.00 43.60 3.28
1537 2801 7.111247 ACACAATCTGTTTGGAAATTCAGAA 57.889 32.000 0.00 0.00 39.34 3.02
1601 2865 9.762933 AGCACAAAAATCATACAATTTTACTGT 57.237 25.926 0.00 0.00 37.75 3.55
1667 3027 3.788227 ACCAGCAGTCCACAAATCTTA 57.212 42.857 0.00 0.00 0.00 2.10
1823 3445 0.463295 ACATCAGCAGGCTTGATCCG 60.463 55.000 0.00 0.00 0.00 4.18
1834 3456 1.745141 GCTTGATCCGCAATGTCTCCT 60.745 52.381 0.00 0.00 35.59 3.69
1860 3483 5.616270 TGTAGGTGAAGTTGCAAATAGTCA 58.384 37.500 0.00 0.00 0.00 3.41
1903 3528 2.271800 GACACAAGATACCTTCCGCAG 58.728 52.381 0.00 0.00 0.00 5.18
1907 3532 0.460311 AAGATACCTTCCGCAGACCG 59.540 55.000 0.00 0.00 0.00 4.79
1970 3595 2.308866 ACCTTGACCTTGAACCCATAGG 59.691 50.000 0.00 0.00 40.04 2.57
2000 3625 2.618241 TCGCTTCATTGCAGTGAAAAGT 59.382 40.909 22.90 0.00 37.63 2.66
2004 3629 4.026310 GCTTCATTGCAGTGAAAAGTTGTG 60.026 41.667 22.90 12.06 37.63 3.33
2033 3659 2.092968 AGGAAGTTTGAGTGTGCAGTGA 60.093 45.455 0.00 0.00 0.00 3.41
2071 3745 8.867112 ATGCATTATCAAAATTCAGTGATGAC 57.133 30.769 0.00 0.00 36.00 3.06
2084 3758 9.793252 AATTCAGTGATGACATAATAAAAGTGC 57.207 29.630 0.00 0.00 0.00 4.40
2141 3818 4.938226 AGTAGCTGATTAACTTGTGCTTCC 59.062 41.667 0.00 0.00 32.72 3.46
2157 3834 4.516698 GTGCTTCCAATTGTCTCTTTCTGA 59.483 41.667 4.43 0.00 0.00 3.27
2169 3846 6.816136 TGTCTCTTTCTGACATTAAGTGTGA 58.184 36.000 0.00 0.00 42.36 3.58
2177 3854 7.246674 TCTGACATTAAGTGTGACAACTTTC 57.753 36.000 5.91 0.41 42.36 2.62
2184 3861 7.915293 TTAAGTGTGACAACTTTCTCTTTCA 57.085 32.000 5.91 0.00 40.77 2.69
2203 3880 8.412608 TCTTTCAGTTCACGAATTATGAGATC 57.587 34.615 0.00 0.00 0.00 2.75
2261 3938 6.992063 ATTATGTTCAGAGTTGTGTCCATC 57.008 37.500 0.00 0.00 0.00 3.51
2265 3942 4.040829 TGTTCAGAGTTGTGTCCATCATCT 59.959 41.667 0.00 0.00 0.00 2.90
2266 3943 5.245977 TGTTCAGAGTTGTGTCCATCATCTA 59.754 40.000 0.00 0.00 0.00 1.98
2267 3944 6.166279 GTTCAGAGTTGTGTCCATCATCTAA 58.834 40.000 0.00 0.00 0.00 2.10
2268 3945 5.970592 TCAGAGTTGTGTCCATCATCTAAG 58.029 41.667 0.00 0.00 0.00 2.18
2269 3946 5.716703 TCAGAGTTGTGTCCATCATCTAAGA 59.283 40.000 0.00 0.00 0.00 2.10
2270 3947 6.382282 TCAGAGTTGTGTCCATCATCTAAGAT 59.618 38.462 0.00 0.00 0.00 2.40
2271 3948 6.479331 CAGAGTTGTGTCCATCATCTAAGATG 59.521 42.308 0.00 0.00 43.90 2.90
2280 3957 4.563061 CATCATCTAAGATGGTCGATGCA 58.437 43.478 0.00 0.00 41.29 3.96
2281 3958 3.982475 TCATCTAAGATGGTCGATGCAC 58.018 45.455 0.00 0.00 34.68 4.57
2282 3959 3.384467 TCATCTAAGATGGTCGATGCACA 59.616 43.478 0.00 0.00 34.68 4.57
2283 3960 3.885724 TCTAAGATGGTCGATGCACAA 57.114 42.857 0.00 0.00 0.00 3.33
2284 3961 4.200838 TCTAAGATGGTCGATGCACAAA 57.799 40.909 0.00 0.00 0.00 2.83
2285 3962 4.769688 TCTAAGATGGTCGATGCACAAAT 58.230 39.130 0.00 0.00 0.00 2.32
2286 3963 5.912892 TCTAAGATGGTCGATGCACAAATA 58.087 37.500 0.00 0.00 0.00 1.40
2287 3964 4.882671 AAGATGGTCGATGCACAAATAC 57.117 40.909 0.00 0.00 0.00 1.89
2288 3965 3.872696 AGATGGTCGATGCACAAATACA 58.127 40.909 0.00 0.00 0.00 2.29
2289 3966 4.454678 AGATGGTCGATGCACAAATACAT 58.545 39.130 0.00 0.00 0.00 2.29
2290 3967 5.610398 AGATGGTCGATGCACAAATACATA 58.390 37.500 0.00 0.00 0.00 2.29
2291 3968 6.054941 AGATGGTCGATGCACAAATACATAA 58.945 36.000 0.00 0.00 0.00 1.90
2292 3969 6.712095 AGATGGTCGATGCACAAATACATAAT 59.288 34.615 0.00 0.00 0.00 1.28
2293 3970 7.877612 AGATGGTCGATGCACAAATACATAATA 59.122 33.333 0.00 0.00 0.00 0.98
2294 3971 7.420184 TGGTCGATGCACAAATACATAATAG 57.580 36.000 0.00 0.00 0.00 1.73
2295 3972 7.213678 TGGTCGATGCACAAATACATAATAGA 58.786 34.615 0.00 0.00 0.00 1.98
2296 3973 7.877612 TGGTCGATGCACAAATACATAATAGAT 59.122 33.333 0.00 0.00 0.00 1.98
2297 3974 8.721478 GGTCGATGCACAAATACATAATAGATT 58.279 33.333 0.00 0.00 0.00 2.40
2322 3999 6.677781 ACATCTTCCAAACATTGTATACGG 57.322 37.500 0.00 0.00 0.00 4.02
2323 4000 6.177610 ACATCTTCCAAACATTGTATACGGT 58.822 36.000 0.00 0.00 0.00 4.83
2324 4001 6.093495 ACATCTTCCAAACATTGTATACGGTG 59.907 38.462 0.00 2.30 0.00 4.94
2325 4002 5.795972 TCTTCCAAACATTGTATACGGTGA 58.204 37.500 12.61 1.62 0.00 4.02
2326 4003 5.640357 TCTTCCAAACATTGTATACGGTGAC 59.360 40.000 12.61 0.00 0.00 3.67
2327 4004 4.895961 TCCAAACATTGTATACGGTGACA 58.104 39.130 12.61 0.00 0.00 3.58
2328 4005 4.932799 TCCAAACATTGTATACGGTGACAG 59.067 41.667 12.61 0.00 0.00 3.51
2329 4006 4.932799 CCAAACATTGTATACGGTGACAGA 59.067 41.667 12.61 0.00 0.00 3.41
2330 4007 5.063438 CCAAACATTGTATACGGTGACAGAG 59.937 44.000 12.61 0.00 0.00 3.35
2331 4008 3.782046 ACATTGTATACGGTGACAGAGC 58.218 45.455 12.61 0.00 0.00 4.09
2332 4009 3.194755 ACATTGTATACGGTGACAGAGCA 59.805 43.478 12.61 0.00 0.00 4.26
2333 4010 2.933495 TGTATACGGTGACAGAGCAC 57.067 50.000 0.00 0.00 38.05 4.40
2334 4011 2.443416 TGTATACGGTGACAGAGCACT 58.557 47.619 0.00 0.00 38.78 4.40
2335 4012 3.613030 TGTATACGGTGACAGAGCACTA 58.387 45.455 0.00 0.00 38.78 2.74
2336 4013 4.204799 TGTATACGGTGACAGAGCACTAT 58.795 43.478 0.00 0.00 38.78 2.12
2337 4014 3.992260 ATACGGTGACAGAGCACTATC 57.008 47.619 0.00 0.00 38.78 2.08
2338 4015 1.545841 ACGGTGACAGAGCACTATCA 58.454 50.000 0.00 0.00 38.78 2.15
2339 4016 1.893137 ACGGTGACAGAGCACTATCAA 59.107 47.619 0.00 0.00 38.78 2.57
2340 4017 2.497675 ACGGTGACAGAGCACTATCAAT 59.502 45.455 0.00 0.00 38.78 2.57
2341 4018 3.119291 CGGTGACAGAGCACTATCAATC 58.881 50.000 0.00 0.00 38.78 2.67
2342 4019 3.429410 CGGTGACAGAGCACTATCAATCA 60.429 47.826 0.00 0.00 38.78 2.57
2343 4020 4.118410 GGTGACAGAGCACTATCAATCAG 58.882 47.826 0.00 0.00 38.78 2.90
2344 4021 4.382470 GGTGACAGAGCACTATCAATCAGT 60.382 45.833 0.00 0.00 38.78 3.41
2345 4022 5.163509 GGTGACAGAGCACTATCAATCAGTA 60.164 44.000 0.00 0.00 38.78 2.74
2346 4023 5.976534 GTGACAGAGCACTATCAATCAGTAG 59.023 44.000 0.00 0.00 31.09 2.57
2347 4024 4.942852 ACAGAGCACTATCAATCAGTAGC 58.057 43.478 0.00 0.00 0.00 3.58
2348 4025 4.403752 ACAGAGCACTATCAATCAGTAGCA 59.596 41.667 0.00 0.00 0.00 3.49
2349 4026 5.070180 ACAGAGCACTATCAATCAGTAGCAT 59.930 40.000 0.00 0.00 0.00 3.79
2350 4027 5.990386 CAGAGCACTATCAATCAGTAGCATT 59.010 40.000 0.00 0.00 0.00 3.56
2351 4028 5.990386 AGAGCACTATCAATCAGTAGCATTG 59.010 40.000 0.00 0.00 33.22 2.82
2352 4029 5.922053 AGCACTATCAATCAGTAGCATTGA 58.078 37.500 0.00 0.00 42.93 2.57
2353 4030 6.351711 AGCACTATCAATCAGTAGCATTGAA 58.648 36.000 1.05 0.00 42.23 2.69
2354 4031 6.825213 AGCACTATCAATCAGTAGCATTGAAA 59.175 34.615 1.05 0.00 42.23 2.69
2355 4032 7.501559 AGCACTATCAATCAGTAGCATTGAAAT 59.498 33.333 1.05 0.00 42.23 2.17
2356 4033 7.802251 GCACTATCAATCAGTAGCATTGAAATC 59.198 37.037 1.05 0.00 42.23 2.17
2357 4034 8.288208 CACTATCAATCAGTAGCATTGAAATCC 58.712 37.037 1.05 0.00 42.23 3.01
2358 4035 7.994911 ACTATCAATCAGTAGCATTGAAATCCA 59.005 33.333 1.05 0.00 42.23 3.41
2359 4036 7.649533 ATCAATCAGTAGCATTGAAATCCAA 57.350 32.000 1.05 0.00 42.23 3.53
2360 4037 7.465353 TCAATCAGTAGCATTGAAATCCAAA 57.535 32.000 0.00 0.00 37.33 3.28
2361 4038 7.894708 TCAATCAGTAGCATTGAAATCCAAAA 58.105 30.769 0.00 0.00 37.33 2.44
2362 4039 7.814107 TCAATCAGTAGCATTGAAATCCAAAAC 59.186 33.333 0.00 0.00 37.33 2.43
2363 4040 6.647334 TCAGTAGCATTGAAATCCAAAACA 57.353 33.333 0.00 0.00 38.43 2.83
2364 4041 7.230849 TCAGTAGCATTGAAATCCAAAACAT 57.769 32.000 0.00 0.00 38.43 2.71
2365 4042 7.092079 TCAGTAGCATTGAAATCCAAAACATG 58.908 34.615 0.00 0.00 38.43 3.21
2366 4043 7.039853 TCAGTAGCATTGAAATCCAAAACATGA 60.040 33.333 0.00 0.00 38.43 3.07
2367 4044 7.062605 CAGTAGCATTGAAATCCAAAACATGAC 59.937 37.037 0.00 0.00 38.43 3.06
2368 4045 5.856156 AGCATTGAAATCCAAAACATGACA 58.144 33.333 0.00 0.00 38.43 3.58
2369 4046 6.289834 AGCATTGAAATCCAAAACATGACAA 58.710 32.000 0.00 0.00 38.43 3.18
2370 4047 6.425721 AGCATTGAAATCCAAAACATGACAAG 59.574 34.615 0.00 0.00 38.43 3.16
2371 4048 6.424509 GCATTGAAATCCAAAACATGACAAGA 59.575 34.615 0.00 0.00 38.43 3.02
2372 4049 7.118680 GCATTGAAATCCAAAACATGACAAGAT 59.881 33.333 0.00 0.00 38.43 2.40
2373 4050 8.653338 CATTGAAATCCAAAACATGACAAGATC 58.347 33.333 0.00 0.00 38.43 2.75
2374 4051 6.690530 TGAAATCCAAAACATGACAAGATCC 58.309 36.000 0.00 0.00 0.00 3.36
2375 4052 6.494491 TGAAATCCAAAACATGACAAGATCCT 59.506 34.615 0.00 0.00 0.00 3.24
2376 4053 5.909621 ATCCAAAACATGACAAGATCCTG 57.090 39.130 0.00 0.00 0.00 3.86
2377 4054 3.507233 TCCAAAACATGACAAGATCCTGC 59.493 43.478 0.00 0.00 0.00 4.85
2378 4055 3.256383 CCAAAACATGACAAGATCCTGCA 59.744 43.478 0.00 0.00 0.00 4.41
2379 4056 4.081862 CCAAAACATGACAAGATCCTGCAT 60.082 41.667 0.00 0.00 0.00 3.96
2380 4057 5.125900 CCAAAACATGACAAGATCCTGCATA 59.874 40.000 0.00 0.00 0.00 3.14
2381 4058 6.350361 CCAAAACATGACAAGATCCTGCATAA 60.350 38.462 0.00 0.00 0.00 1.90
2382 4059 7.262772 CAAAACATGACAAGATCCTGCATAAT 58.737 34.615 0.00 0.00 0.00 1.28
2383 4060 6.387041 AACATGACAAGATCCTGCATAATG 57.613 37.500 0.00 0.00 0.00 1.90
2384 4061 4.825634 ACATGACAAGATCCTGCATAATGG 59.174 41.667 0.00 0.00 0.00 3.16
2385 4062 4.776435 TGACAAGATCCTGCATAATGGA 57.224 40.909 0.00 0.00 36.72 3.41
2386 4063 5.314718 TGACAAGATCCTGCATAATGGAT 57.685 39.130 4.95 4.95 44.91 3.41
2387 4064 6.438186 TGACAAGATCCTGCATAATGGATA 57.562 37.500 5.25 0.00 42.56 2.59
2388 4065 7.024345 TGACAAGATCCTGCATAATGGATAT 57.976 36.000 5.25 0.00 42.56 1.63
2389 4066 8.149631 TGACAAGATCCTGCATAATGGATATA 57.850 34.615 5.25 0.00 42.56 0.86
2390 4067 8.775151 TGACAAGATCCTGCATAATGGATATAT 58.225 33.333 5.25 0.00 42.56 0.86
2391 4068 9.624373 GACAAGATCCTGCATAATGGATATATT 57.376 33.333 5.25 0.00 42.56 1.28
2392 4069 9.624373 ACAAGATCCTGCATAATGGATATATTC 57.376 33.333 5.25 0.00 42.56 1.75
2393 4070 9.623000 CAAGATCCTGCATAATGGATATATTCA 57.377 33.333 5.25 0.00 42.56 2.57
2421 4098 7.959689 ATACATGATCTTCCAAAATCTCGAG 57.040 36.000 5.93 5.93 0.00 4.04
2422 4099 5.738909 ACATGATCTTCCAAAATCTCGAGT 58.261 37.500 13.13 0.00 0.00 4.18
2423 4100 6.878317 ACATGATCTTCCAAAATCTCGAGTA 58.122 36.000 13.13 0.00 0.00 2.59
2424 4101 6.983307 ACATGATCTTCCAAAATCTCGAGTAG 59.017 38.462 13.13 0.00 0.00 2.57
2425 4102 5.352284 TGATCTTCCAAAATCTCGAGTAGC 58.648 41.667 13.13 0.00 0.00 3.58
2426 4103 4.801330 TCTTCCAAAATCTCGAGTAGCA 57.199 40.909 13.13 0.00 0.00 3.49
2427 4104 5.344743 TCTTCCAAAATCTCGAGTAGCAT 57.655 39.130 13.13 0.00 0.00 3.79
2428 4105 5.734720 TCTTCCAAAATCTCGAGTAGCATT 58.265 37.500 13.13 1.53 0.00 3.56
2429 4106 5.582269 TCTTCCAAAATCTCGAGTAGCATTG 59.418 40.000 13.13 11.24 0.00 2.82
2430 4107 4.191544 TCCAAAATCTCGAGTAGCATTGG 58.808 43.478 21.22 21.22 35.18 3.16
2431 4108 4.081142 TCCAAAATCTCGAGTAGCATTGGA 60.081 41.667 23.66 23.66 37.98 3.53
2432 4109 4.635765 CCAAAATCTCGAGTAGCATTGGAA 59.364 41.667 22.04 0.30 35.55 3.53
2433 4110 5.297776 CCAAAATCTCGAGTAGCATTGGAAT 59.702 40.000 22.04 2.37 35.55 3.01
2434 4111 6.183360 CCAAAATCTCGAGTAGCATTGGAATT 60.183 38.462 22.04 7.35 35.55 2.17
2435 4112 7.012327 CCAAAATCTCGAGTAGCATTGGAATTA 59.988 37.037 22.04 0.00 35.55 1.40
2436 4113 8.397906 CAAAATCTCGAGTAGCATTGGAATTAA 58.602 33.333 13.13 0.00 0.00 1.40
2437 4114 8.682936 AAATCTCGAGTAGCATTGGAATTAAT 57.317 30.769 13.13 0.00 0.00 1.40
2438 4115 7.664082 ATCTCGAGTAGCATTGGAATTAATG 57.336 36.000 13.13 0.00 40.25 1.90
2439 4116 5.991606 TCTCGAGTAGCATTGGAATTAATGG 59.008 40.000 13.13 0.00 38.25 3.16
2440 4117 5.924356 TCGAGTAGCATTGGAATTAATGGA 58.076 37.500 3.69 0.00 38.25 3.41
2441 4118 5.991606 TCGAGTAGCATTGGAATTAATGGAG 59.008 40.000 3.69 0.00 38.25 3.86
2442 4119 5.180117 CGAGTAGCATTGGAATTAATGGAGG 59.820 44.000 3.69 0.00 38.25 4.30
2443 4120 5.388654 AGTAGCATTGGAATTAATGGAGGG 58.611 41.667 3.69 0.00 38.25 4.30
2444 4121 4.541250 AGCATTGGAATTAATGGAGGGA 57.459 40.909 3.69 0.00 38.25 4.20
2445 4122 4.477249 AGCATTGGAATTAATGGAGGGAG 58.523 43.478 3.69 0.00 38.25 4.30
2446 4123 4.078980 AGCATTGGAATTAATGGAGGGAGT 60.079 41.667 3.69 0.00 38.25 3.85
2447 4124 5.134339 AGCATTGGAATTAATGGAGGGAGTA 59.866 40.000 3.69 0.00 38.25 2.59
2448 4125 6.012745 GCATTGGAATTAATGGAGGGAGTAT 58.987 40.000 3.69 0.00 38.25 2.12
2449 4126 6.071728 GCATTGGAATTAATGGAGGGAGTATG 60.072 42.308 3.69 0.00 38.25 2.39
2450 4127 6.590656 TTGGAATTAATGGAGGGAGTATGT 57.409 37.500 0.00 0.00 0.00 2.29
2451 4128 7.699709 TTGGAATTAATGGAGGGAGTATGTA 57.300 36.000 0.00 0.00 0.00 2.29
2452 4129 7.074653 TGGAATTAATGGAGGGAGTATGTAC 57.925 40.000 0.00 0.00 0.00 2.90
2453 4130 6.849697 TGGAATTAATGGAGGGAGTATGTACT 59.150 38.462 0.00 0.00 39.71 2.73
2454 4131 8.014263 TGGAATTAATGGAGGGAGTATGTACTA 58.986 37.037 0.00 0.00 36.50 1.82
2455 4132 8.877195 GGAATTAATGGAGGGAGTATGTACTAA 58.123 37.037 0.00 0.00 36.50 2.24
2462 4139 8.930846 TGGAGGGAGTATGTACTAAATACTAC 57.069 38.462 5.77 5.77 40.20 2.73
2463 4140 8.505246 TGGAGGGAGTATGTACTAAATACTACA 58.495 37.037 13.38 1.21 41.48 2.74
2464 4141 9.359653 GGAGGGAGTATGTACTAAATACTACAA 57.640 37.037 13.38 0.00 41.48 2.41
2524 4201 4.756084 AAAGTGCATAGAGTTCAACTGC 57.244 40.909 0.00 0.00 0.00 4.40
2525 4202 3.407424 AGTGCATAGAGTTCAACTGCA 57.593 42.857 0.00 0.00 40.29 4.41
2526 4203 3.743521 AGTGCATAGAGTTCAACTGCAA 58.256 40.909 3.89 0.00 43.73 4.08
2527 4204 4.330250 AGTGCATAGAGTTCAACTGCAAT 58.670 39.130 3.89 0.52 43.73 3.56
2528 4205 4.155462 AGTGCATAGAGTTCAACTGCAATG 59.845 41.667 3.89 2.17 43.73 2.82
2529 4206 3.441222 TGCATAGAGTTCAACTGCAATGG 59.559 43.478 0.00 0.00 39.68 3.16
2530 4207 3.181493 GCATAGAGTTCAACTGCAATGGG 60.181 47.826 0.00 0.00 33.13 4.00
2531 4208 2.664402 AGAGTTCAACTGCAATGGGT 57.336 45.000 0.00 0.00 0.00 4.51
2532 4209 2.233271 AGAGTTCAACTGCAATGGGTG 58.767 47.619 0.00 0.00 0.00 4.61
2542 4219 4.824289 ACTGCAATGGGTGAAAATGAATC 58.176 39.130 0.00 0.00 0.00 2.52
2562 4239 7.406553 TGAATCGAAATAAAGGTATTTGCTCG 58.593 34.615 0.00 0.00 39.53 5.03
2596 4273 7.849322 TGTATGGATATACTAGACAAGCCAA 57.151 36.000 0.00 0.00 39.90 4.52
2618 4335 1.311859 CCAGCAAGAGCAACAACAGA 58.688 50.000 0.00 0.00 45.49 3.41
2658 4390 0.034283 GAGTACGGGAGGTGGAGAGT 60.034 60.000 0.00 0.00 0.00 3.24
2719 4451 2.045926 ACAGCGTTGATGGAGGCC 60.046 61.111 6.16 0.00 0.00 5.19
2840 4607 2.352032 AACGCTAAGGAGCCGAGCT 61.352 57.895 12.56 0.00 46.86 4.09
2880 4647 0.250234 CTTGGGAACTGATGCGGAGA 59.750 55.000 0.00 0.00 0.00 3.71
2906 4673 2.515926 TCCATACGATGCTGAGCTTC 57.484 50.000 5.83 8.24 0.00 3.86
2990 4757 3.758172 TTTTTCCGTGGCAGGCTC 58.242 55.556 0.70 0.00 0.00 4.70
2991 4758 2.258013 TTTTTCCGTGGCAGGCTCG 61.258 57.895 11.26 11.26 0.00 5.03
2992 4759 2.951475 TTTTTCCGTGGCAGGCTCGT 62.951 55.000 16.21 0.00 0.00 4.18
2993 4760 4.680237 TTCCGTGGCAGGCTCGTG 62.680 66.667 16.21 8.66 0.00 4.35
2995 4762 4.063967 CCGTGGCAGGCTCGTGTA 62.064 66.667 16.21 0.00 0.00 2.90
2996 4763 2.809601 CGTGGCAGGCTCGTGTAC 60.810 66.667 10.11 0.00 0.00 2.90
2997 4764 2.809601 GTGGCAGGCTCGTGTACG 60.810 66.667 0.00 0.00 41.45 3.67
3014 4781 2.048690 GATGAGATCGGGCGCCTC 60.049 66.667 28.56 16.77 0.00 4.70
3015 4782 3.581687 GATGAGATCGGGCGCCTCC 62.582 68.421 28.56 9.89 0.00 4.30
3016 4783 4.841617 TGAGATCGGGCGCCTCCT 62.842 66.667 28.56 17.50 34.39 3.69
3017 4784 3.984749 GAGATCGGGCGCCTCCTC 61.985 72.222 28.56 21.47 34.39 3.71
3018 4785 4.531426 AGATCGGGCGCCTCCTCT 62.531 66.667 28.56 21.14 34.39 3.69
3019 4786 3.984749 GATCGGGCGCCTCCTCTC 61.985 72.222 28.56 12.42 34.39 3.20
3045 4812 4.683334 GCACGCAGCGGACCAAAC 62.683 66.667 21.15 0.00 0.00 2.93
3046 4813 4.368808 CACGCAGCGGACCAAACG 62.369 66.667 21.15 0.00 0.00 3.60
3054 4821 3.740384 CGGACCAAACGCTGTTTAC 57.260 52.632 6.39 3.04 0.00 2.01
3055 4822 1.223187 CGGACCAAACGCTGTTTACT 58.777 50.000 6.39 0.00 0.00 2.24
3056 4823 1.600485 CGGACCAAACGCTGTTTACTT 59.400 47.619 6.39 0.00 0.00 2.24
3057 4824 2.032426 CGGACCAAACGCTGTTTACTTT 59.968 45.455 6.39 0.00 0.00 2.66
3058 4825 3.487879 CGGACCAAACGCTGTTTACTTTT 60.488 43.478 6.39 0.00 0.00 2.27
3059 4826 4.426416 GGACCAAACGCTGTTTACTTTTT 58.574 39.130 6.39 0.00 0.00 1.94
3060 4827 4.501559 GGACCAAACGCTGTTTACTTTTTC 59.498 41.667 6.39 0.00 0.00 2.29
3061 4828 4.099824 ACCAAACGCTGTTTACTTTTTCG 58.900 39.130 6.39 0.00 0.00 3.46
3062 4829 3.061469 CCAAACGCTGTTTACTTTTTCGC 60.061 43.478 6.39 0.00 0.00 4.70
3063 4830 2.013286 ACGCTGTTTACTTTTTCGCG 57.987 45.000 0.00 0.00 44.06 5.87
3064 4831 1.593933 ACGCTGTTTACTTTTTCGCGA 59.406 42.857 3.71 3.71 41.39 5.87
3065 4832 2.030701 ACGCTGTTTACTTTTTCGCGAA 59.969 40.909 19.38 19.38 41.39 4.70
3066 4833 3.223157 CGCTGTTTACTTTTTCGCGAAT 58.777 40.909 24.05 10.34 41.39 3.34
3067 4834 4.084433 ACGCTGTTTACTTTTTCGCGAATA 60.084 37.500 24.05 15.77 41.39 1.75
3068 4835 4.256766 CGCTGTTTACTTTTTCGCGAATAC 59.743 41.667 24.05 11.99 41.39 1.89
3069 4836 4.256766 GCTGTTTACTTTTTCGCGAATACG 59.743 41.667 24.05 17.64 42.93 3.06
3081 4848 2.503943 CGAATACGCAAAGCTTTCGT 57.496 45.000 27.38 27.38 39.88 3.85
3082 4849 3.628053 CGAATACGCAAAGCTTTCGTA 57.372 42.857 28.92 28.92 41.92 3.43
3083 4850 3.331178 CGAATACGCAAAGCTTTCGTAC 58.669 45.455 29.16 21.55 40.77 3.67
3084 4851 3.667050 GAATACGCAAAGCTTTCGTACC 58.333 45.455 29.16 23.17 40.77 3.34
3085 4852 2.151881 TACGCAAAGCTTTCGTACCA 57.848 45.000 25.94 15.18 37.61 3.25
3086 4853 1.519408 ACGCAAAGCTTTCGTACCAT 58.481 45.000 25.01 9.00 34.41 3.55
3087 4854 1.877443 ACGCAAAGCTTTCGTACCATT 59.123 42.857 25.01 8.47 34.41 3.16
3088 4855 2.095919 ACGCAAAGCTTTCGTACCATTC 60.096 45.455 25.01 3.78 34.41 2.67
3089 4856 2.095969 CGCAAAGCTTTCGTACCATTCA 60.096 45.455 9.23 0.00 0.00 2.57
3090 4857 3.426159 CGCAAAGCTTTCGTACCATTCAT 60.426 43.478 9.23 0.00 0.00 2.57
3091 4858 4.485163 GCAAAGCTTTCGTACCATTCATT 58.515 39.130 9.23 0.00 0.00 2.57
3092 4859 4.923281 GCAAAGCTTTCGTACCATTCATTT 59.077 37.500 9.23 0.00 0.00 2.32
3093 4860 6.090129 GCAAAGCTTTCGTACCATTCATTTA 58.910 36.000 9.23 0.00 0.00 1.40
3094 4861 6.751888 GCAAAGCTTTCGTACCATTCATTTAT 59.248 34.615 9.23 0.00 0.00 1.40
3095 4862 7.913297 GCAAAGCTTTCGTACCATTCATTTATA 59.087 33.333 9.23 0.00 0.00 0.98
3096 4863 9.438291 CAAAGCTTTCGTACCATTCATTTATAG 57.562 33.333 9.23 0.00 0.00 1.31
3097 4864 8.958119 AAGCTTTCGTACCATTCATTTATAGA 57.042 30.769 0.00 0.00 0.00 1.98
3098 4865 9.561069 AAGCTTTCGTACCATTCATTTATAGAT 57.439 29.630 0.00 0.00 0.00 1.98
3104 4871 9.749340 TCGTACCATTCATTTATAGATAGAGGA 57.251 33.333 0.00 0.00 0.00 3.71
3117 4884 9.521841 TTATAGATAGAGGATGAGTACAAGGTG 57.478 37.037 0.00 0.00 0.00 4.00
3118 4885 6.019656 AGATAGAGGATGAGTACAAGGTGA 57.980 41.667 0.00 0.00 0.00 4.02
3119 4886 6.619464 AGATAGAGGATGAGTACAAGGTGAT 58.381 40.000 0.00 0.00 0.00 3.06
3120 4887 6.493115 AGATAGAGGATGAGTACAAGGTGATG 59.507 42.308 0.00 0.00 0.00 3.07
3121 4888 3.708631 AGAGGATGAGTACAAGGTGATGG 59.291 47.826 0.00 0.00 0.00 3.51
3122 4889 3.452627 GAGGATGAGTACAAGGTGATGGT 59.547 47.826 0.00 0.00 0.00 3.55
3123 4890 3.198635 AGGATGAGTACAAGGTGATGGTG 59.801 47.826 0.00 0.00 0.00 4.17
3124 4891 3.055094 GGATGAGTACAAGGTGATGGTGT 60.055 47.826 0.00 0.00 0.00 4.16
3125 4892 4.565652 GGATGAGTACAAGGTGATGGTGTT 60.566 45.833 0.00 0.00 0.00 3.32
3126 4893 5.338056 GGATGAGTACAAGGTGATGGTGTTA 60.338 44.000 0.00 0.00 0.00 2.41
3127 4894 4.890088 TGAGTACAAGGTGATGGTGTTAC 58.110 43.478 0.00 0.00 0.00 2.50
3128 4895 4.345547 TGAGTACAAGGTGATGGTGTTACA 59.654 41.667 0.00 0.00 0.00 2.41
3129 4896 4.638304 AGTACAAGGTGATGGTGTTACAC 58.362 43.478 6.99 6.99 0.00 2.90
3130 4897 3.857157 ACAAGGTGATGGTGTTACACT 57.143 42.857 15.44 0.00 34.40 3.55
3131 4898 3.476552 ACAAGGTGATGGTGTTACACTG 58.523 45.455 15.44 5.60 34.40 3.66
3132 4899 3.135712 ACAAGGTGATGGTGTTACACTGA 59.864 43.478 15.44 2.96 34.40 3.41
3133 4900 3.685139 AGGTGATGGTGTTACACTGAG 57.315 47.619 15.44 0.00 34.40 3.35
3134 4901 3.239449 AGGTGATGGTGTTACACTGAGA 58.761 45.455 15.44 0.00 34.40 3.27
3135 4902 3.259374 AGGTGATGGTGTTACACTGAGAG 59.741 47.826 15.44 0.00 34.40 3.20
3136 4903 3.258372 GGTGATGGTGTTACACTGAGAGA 59.742 47.826 15.44 0.00 34.40 3.10
3137 4904 4.238514 GTGATGGTGTTACACTGAGAGAC 58.761 47.826 15.44 2.03 34.40 3.36
3138 4905 3.057526 TGATGGTGTTACACTGAGAGACG 60.058 47.826 15.44 0.00 34.40 4.18
3139 4906 2.304092 TGGTGTTACACTGAGAGACGT 58.696 47.619 15.44 0.00 34.40 4.34
3140 4907 3.479489 TGGTGTTACACTGAGAGACGTA 58.521 45.455 15.44 0.00 34.40 3.57
3141 4908 3.251729 TGGTGTTACACTGAGAGACGTAC 59.748 47.826 15.44 0.00 34.40 3.67
3142 4909 3.251729 GGTGTTACACTGAGAGACGTACA 59.748 47.826 15.44 0.00 34.40 2.90
3143 4910 4.217497 GTGTTACACTGAGAGACGTACAC 58.783 47.826 8.41 0.00 0.00 2.90
3144 4911 3.059393 TGTTACACTGAGAGACGTACACG 60.059 47.826 0.00 0.00 46.33 4.49
3145 4912 0.237761 ACACTGAGAGACGTACACGC 59.762 55.000 0.85 0.00 44.43 5.34
3146 4913 0.237498 CACTGAGAGACGTACACGCA 59.763 55.000 0.85 0.00 44.43 5.24
3147 4914 0.949397 ACTGAGAGACGTACACGCAA 59.051 50.000 0.85 0.00 44.43 4.85
3148 4915 1.069159 ACTGAGAGACGTACACGCAAG 60.069 52.381 0.85 0.00 44.43 4.01
3149 4916 1.197036 CTGAGAGACGTACACGCAAGA 59.803 52.381 0.85 0.00 44.43 3.02
3150 4917 1.069432 TGAGAGACGTACACGCAAGAC 60.069 52.381 0.85 0.00 44.43 3.01
3161 4928 2.878429 GCAAGACGGCGAGAGAGA 59.122 61.111 16.62 0.00 0.00 3.10
3162 4929 1.226547 GCAAGACGGCGAGAGAGAG 60.227 63.158 16.62 0.00 0.00 3.20
3163 4930 1.649390 GCAAGACGGCGAGAGAGAGA 61.649 60.000 16.62 0.00 0.00 3.10
3164 4931 0.805614 CAAGACGGCGAGAGAGAGAA 59.194 55.000 16.62 0.00 0.00 2.87
3165 4932 0.806241 AAGACGGCGAGAGAGAGAAC 59.194 55.000 16.62 0.00 0.00 3.01
3166 4933 0.321741 AGACGGCGAGAGAGAGAACA 60.322 55.000 16.62 0.00 0.00 3.18
3167 4934 0.179184 GACGGCGAGAGAGAGAACAC 60.179 60.000 16.62 0.00 0.00 3.32
3168 4935 1.137825 CGGCGAGAGAGAGAACACC 59.862 63.158 0.00 0.00 0.00 4.16
3169 4936 1.309499 CGGCGAGAGAGAGAACACCT 61.309 60.000 0.00 0.00 0.00 4.00
3170 4937 1.752683 GGCGAGAGAGAGAACACCTA 58.247 55.000 0.00 0.00 0.00 3.08
3171 4938 2.093106 GGCGAGAGAGAGAACACCTAA 58.907 52.381 0.00 0.00 0.00 2.69
3172 4939 2.098443 GGCGAGAGAGAGAACACCTAAG 59.902 54.545 0.00 0.00 0.00 2.18
3173 4940 2.478879 GCGAGAGAGAGAACACCTAAGC 60.479 54.545 0.00 0.00 0.00 3.09
3174 4941 2.750166 CGAGAGAGAGAACACCTAAGCA 59.250 50.000 0.00 0.00 0.00 3.91
3175 4942 3.181501 CGAGAGAGAGAACACCTAAGCAG 60.182 52.174 0.00 0.00 0.00 4.24
3176 4943 2.495669 AGAGAGAGAACACCTAAGCAGC 59.504 50.000 0.00 0.00 0.00 5.25
3177 4944 2.232452 GAGAGAGAACACCTAAGCAGCA 59.768 50.000 0.00 0.00 0.00 4.41
3178 4945 2.634940 AGAGAGAACACCTAAGCAGCAA 59.365 45.455 0.00 0.00 0.00 3.91
3179 4946 3.071602 AGAGAGAACACCTAAGCAGCAAA 59.928 43.478 0.00 0.00 0.00 3.68
3180 4947 3.406764 AGAGAACACCTAAGCAGCAAAG 58.593 45.455 0.00 0.00 0.00 2.77
3181 4948 3.071602 AGAGAACACCTAAGCAGCAAAGA 59.928 43.478 0.00 0.00 0.00 2.52
3182 4949 3.406764 AGAACACCTAAGCAGCAAAGAG 58.593 45.455 0.00 0.00 0.00 2.85
3183 4950 3.071602 AGAACACCTAAGCAGCAAAGAGA 59.928 43.478 0.00 0.00 0.00 3.10
3184 4951 3.492102 ACACCTAAGCAGCAAAGAGAA 57.508 42.857 0.00 0.00 0.00 2.87
3185 4952 3.406764 ACACCTAAGCAGCAAAGAGAAG 58.593 45.455 0.00 0.00 0.00 2.85
3186 4953 2.746362 CACCTAAGCAGCAAAGAGAAGG 59.254 50.000 0.00 0.00 0.00 3.46
3187 4954 2.290577 ACCTAAGCAGCAAAGAGAAGGG 60.291 50.000 0.00 0.00 0.00 3.95
3188 4955 2.363683 CTAAGCAGCAAAGAGAAGGGG 58.636 52.381 0.00 0.00 0.00 4.79
3189 4956 0.897401 AAGCAGCAAAGAGAAGGGGC 60.897 55.000 0.00 0.00 0.00 5.80
3190 4957 1.303970 GCAGCAAAGAGAAGGGGCT 60.304 57.895 0.00 0.00 34.64 5.19
3191 4958 2.564471 CAGCAAAGAGAAGGGGCTG 58.436 57.895 0.00 0.00 44.91 4.85
3192 4959 1.303970 AGCAAAGAGAAGGGGCTGC 60.304 57.895 0.00 0.00 32.76 5.25
3193 4960 1.303970 GCAAAGAGAAGGGGCTGCT 60.304 57.895 0.00 0.00 0.00 4.24
3194 4961 0.897401 GCAAAGAGAAGGGGCTGCTT 60.897 55.000 0.00 0.00 0.00 3.91
3195 4962 1.614317 GCAAAGAGAAGGGGCTGCTTA 60.614 52.381 0.00 0.00 0.00 3.09
3196 4963 2.795329 CAAAGAGAAGGGGCTGCTTAA 58.205 47.619 0.00 0.00 0.00 1.85
3197 4964 3.157087 CAAAGAGAAGGGGCTGCTTAAA 58.843 45.455 0.00 0.00 0.00 1.52
3198 4965 2.498644 AGAGAAGGGGCTGCTTAAAC 57.501 50.000 0.00 0.00 0.00 2.01
3199 4966 1.004862 AGAGAAGGGGCTGCTTAAACC 59.995 52.381 0.00 0.00 0.00 3.27
3200 4967 0.039764 AGAAGGGGCTGCTTAAACCC 59.960 55.000 0.00 0.61 43.69 4.11
3203 4970 3.496675 GGGGCTGCTTAAACCCTAG 57.503 57.895 0.00 0.00 43.68 3.02
3204 4971 0.752009 GGGGCTGCTTAAACCCTAGC 60.752 60.000 0.00 0.00 43.68 3.42
3205 4972 2.795165 GGCTGCTTAAACCCTAGCC 58.205 57.895 0.00 0.00 46.04 3.93
3206 4973 0.752009 GGCTGCTTAAACCCTAGCCC 60.752 60.000 0.00 0.00 46.29 5.19
3207 4974 1.095807 GCTGCTTAAACCCTAGCCCG 61.096 60.000 0.00 0.00 36.56 6.13
3208 4975 0.252197 CTGCTTAAACCCTAGCCCGT 59.748 55.000 0.00 0.00 36.56 5.28
3209 4976 0.251073 TGCTTAAACCCTAGCCCGTC 59.749 55.000 0.00 0.00 36.56 4.79
3210 4977 0.540454 GCTTAAACCCTAGCCCGTCT 59.460 55.000 0.00 0.00 0.00 4.18
3211 4978 1.758862 GCTTAAACCCTAGCCCGTCTA 59.241 52.381 0.00 0.00 0.00 2.59
3212 4979 2.169144 GCTTAAACCCTAGCCCGTCTAA 59.831 50.000 0.00 0.00 0.00 2.10
3213 4980 3.181457 GCTTAAACCCTAGCCCGTCTAAT 60.181 47.826 0.00 0.00 0.00 1.73
3214 4981 4.685302 GCTTAAACCCTAGCCCGTCTAATT 60.685 45.833 0.00 0.00 0.00 1.40
3215 4982 5.453762 GCTTAAACCCTAGCCCGTCTAATTA 60.454 44.000 0.00 0.00 0.00 1.40
3216 4983 6.558488 TTAAACCCTAGCCCGTCTAATTAA 57.442 37.500 0.00 0.00 0.00 1.40
3217 4984 4.412796 AACCCTAGCCCGTCTAATTAAC 57.587 45.455 0.00 0.00 0.00 2.01
3218 4985 2.702478 ACCCTAGCCCGTCTAATTAACC 59.298 50.000 0.00 0.00 0.00 2.85
3219 4986 2.288640 CCCTAGCCCGTCTAATTAACCG 60.289 54.545 0.00 0.00 0.00 4.44
3220 4987 2.288640 CCTAGCCCGTCTAATTAACCGG 60.289 54.545 0.00 0.00 40.12 5.28
3221 4988 1.197812 AGCCCGTCTAATTAACCGGT 58.802 50.000 0.00 0.00 38.79 5.28
3222 4989 1.134610 AGCCCGTCTAATTAACCGGTG 60.135 52.381 8.52 0.00 38.79 4.94
3223 4990 1.405933 GCCCGTCTAATTAACCGGTGT 60.406 52.381 8.52 0.36 38.79 4.16
3224 4991 2.543641 CCCGTCTAATTAACCGGTGTC 58.456 52.381 8.52 0.00 38.79 3.67
3225 4992 2.187707 CCGTCTAATTAACCGGTGTCG 58.812 52.381 8.52 3.73 35.78 4.35
3226 4993 2.159393 CCGTCTAATTAACCGGTGTCGA 60.159 50.000 8.52 0.00 39.00 4.20
3227 4994 3.489738 CCGTCTAATTAACCGGTGTCGAT 60.490 47.826 8.52 0.00 39.00 3.59
3228 4995 3.484649 CGTCTAATTAACCGGTGTCGATG 59.515 47.826 8.52 1.11 39.00 3.84
3229 4996 4.675510 GTCTAATTAACCGGTGTCGATGA 58.324 43.478 8.52 0.00 39.00 2.92
3230 4997 5.287226 GTCTAATTAACCGGTGTCGATGAT 58.713 41.667 8.52 0.00 39.00 2.45
3231 4998 5.175126 GTCTAATTAACCGGTGTCGATGATG 59.825 44.000 8.52 0.00 39.00 3.07
3232 4999 3.536956 ATTAACCGGTGTCGATGATGT 57.463 42.857 8.52 0.00 39.00 3.06
3233 5000 3.322211 TTAACCGGTGTCGATGATGTT 57.678 42.857 8.52 0.00 39.00 2.71
3234 5001 1.438651 AACCGGTGTCGATGATGTTG 58.561 50.000 8.52 0.00 39.00 3.33
3235 5002 0.391130 ACCGGTGTCGATGATGTTGG 60.391 55.000 6.12 0.00 39.00 3.77
3236 5003 1.705337 CCGGTGTCGATGATGTTGGC 61.705 60.000 0.00 0.00 39.00 4.52
3237 5004 1.018752 CGGTGTCGATGATGTTGGCA 61.019 55.000 0.00 0.00 39.00 4.92
3238 5005 1.164411 GGTGTCGATGATGTTGGCAA 58.836 50.000 0.00 0.00 0.00 4.52
3239 5006 1.135689 GGTGTCGATGATGTTGGCAAC 60.136 52.381 23.12 23.12 0.00 4.17
3240 5007 1.806542 GTGTCGATGATGTTGGCAACT 59.193 47.619 28.71 15.65 37.61 3.16
3241 5008 2.076100 TGTCGATGATGTTGGCAACTC 58.924 47.619 28.71 22.30 37.61 3.01
3242 5009 1.398390 GTCGATGATGTTGGCAACTCC 59.602 52.381 28.71 20.19 37.61 3.85
3243 5010 0.374758 CGATGATGTTGGCAACTCCG 59.625 55.000 28.71 19.49 37.80 4.63
3244 5011 0.734889 GATGATGTTGGCAACTCCGG 59.265 55.000 28.71 0.00 37.80 5.14
3245 5012 0.038166 ATGATGTTGGCAACTCCGGT 59.962 50.000 28.71 11.31 37.80 5.28
3246 5013 0.179004 TGATGTTGGCAACTCCGGTT 60.179 50.000 28.71 8.68 37.80 4.44
3253 5020 2.672996 CAACTCCGGTTGCCCCTG 60.673 66.667 0.00 0.00 44.83 4.45
3254 5021 4.660938 AACTCCGGTTGCCCCTGC 62.661 66.667 0.00 0.00 33.96 4.85
3267 5034 4.828296 CCTGCCCTGGCCCACATC 62.828 72.222 5.57 0.00 41.09 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 3.249189 ACAAGGGGAAGGAGCGCA 61.249 61.111 11.47 0.00 0.00 6.09
22 23 1.003718 GAACGACTGGGACAAGGGG 60.004 63.158 0.00 0.00 38.70 4.79
104 111 1.739466 TGATGAGAAAATGGCGACTGC 59.261 47.619 0.00 0.00 41.71 4.40
129 136 2.819284 GGTAGCGAATGGGAGGGGG 61.819 68.421 0.00 0.00 0.00 5.40
130 137 2.829592 GGTAGCGAATGGGAGGGG 59.170 66.667 0.00 0.00 0.00 4.79
131 138 2.421739 CGGTAGCGAATGGGAGGG 59.578 66.667 9.07 0.00 0.00 4.30
132 139 2.280186 GCGGTAGCGAATGGGAGG 60.280 66.667 20.16 0.00 0.00 4.30
151 158 3.036429 GCGGGGCAGAAGAGGTGAT 62.036 63.158 0.00 0.00 0.00 3.06
182 190 2.207924 ACTGTCGCTCTTCCCCGTT 61.208 57.895 0.00 0.00 0.00 4.44
221 229 2.574006 AGGAACTGAAAGCTGCATCA 57.426 45.000 1.02 5.18 37.18 3.07
227 235 2.343625 AGGGAGAAGGAACTGAAAGCT 58.656 47.619 0.00 0.00 40.86 3.74
230 238 3.402628 CGAAGGGAGAAGGAACTGAAA 57.597 47.619 0.00 0.00 40.86 2.69
339 347 3.003275 GCGAGAACAATGGAAGTTGAACA 59.997 43.478 0.00 0.00 33.37 3.18
350 358 3.727079 GCAGTTCATCAGCGAGAACAATG 60.727 47.826 13.33 7.16 44.94 2.82
359 367 0.870393 ACAACAGCAGTTCATCAGCG 59.130 50.000 0.00 0.00 35.28 5.18
407 415 2.572095 CTACGACCGCATCAGGGCAA 62.572 60.000 0.00 0.00 40.05 4.52
416 424 2.339418 CAATGTTTACCTACGACCGCA 58.661 47.619 0.00 0.00 0.00 5.69
417 425 1.662122 CCAATGTTTACCTACGACCGC 59.338 52.381 0.00 0.00 0.00 5.68
422 430 9.925268 GTGTTAATTATCCAATGTTTACCTACG 57.075 33.333 0.00 0.00 0.00 3.51
487 495 5.631992 GCTTAGTATTGGAAGCACAGAAAC 58.368 41.667 1.86 0.00 45.99 2.78
514 522 6.535150 CACACCAACTACCTGTATACTGATTG 59.465 42.308 11.06 9.19 0.00 2.67
521 529 2.166870 CGCCACACCAACTACCTGTATA 59.833 50.000 0.00 0.00 0.00 1.47
539 547 2.362375 TGAAGGCCCAATTCCGCC 60.362 61.111 0.00 4.40 46.09 6.13
541 549 0.323360 TTCCTGAAGGCCCAATTCCG 60.323 55.000 0.00 0.00 34.44 4.30
542 550 1.937191 TTTCCTGAAGGCCCAATTCC 58.063 50.000 0.00 0.00 34.44 3.01
593 601 7.826252 TCTGAAAATGCATCTATAATAGCTCCC 59.174 37.037 0.00 0.00 0.00 4.30
634 643 5.784578 TCTTCTTTGCTCCCTTTTTAACC 57.215 39.130 0.00 0.00 0.00 2.85
642 651 0.700564 TGCCATCTTCTTTGCTCCCT 59.299 50.000 0.00 0.00 0.00 4.20
643 652 1.549203 TTGCCATCTTCTTTGCTCCC 58.451 50.000 0.00 0.00 0.00 4.30
644 653 3.006217 ACTTTTGCCATCTTCTTTGCTCC 59.994 43.478 0.00 0.00 0.00 4.70
645 654 4.248691 ACTTTTGCCATCTTCTTTGCTC 57.751 40.909 0.00 0.00 0.00 4.26
646 655 5.990120 ATACTTTTGCCATCTTCTTTGCT 57.010 34.783 0.00 0.00 0.00 3.91
711 852 2.380064 ACATGCAAAGAAACCAGGGA 57.620 45.000 0.00 0.00 0.00 4.20
724 865 4.154015 CGATCCTCAAAACTGTAACATGCA 59.846 41.667 0.00 0.00 0.00 3.96
778 920 6.599244 TCTCAAATTGACTTTATACAGGGCAG 59.401 38.462 0.00 0.00 0.00 4.85
805 947 7.840931 ACATGTTGTCACTCTAGTCATGATTA 58.159 34.615 12.90 0.00 36.23 1.75
808 950 5.728637 ACATGTTGTCACTCTAGTCATGA 57.271 39.130 12.90 0.00 36.23 3.07
810 952 7.118390 GCTTAAACATGTTGTCACTCTAGTCAT 59.882 37.037 12.82 0.00 0.00 3.06
826 968 3.573967 ACTTCCAACCAGGCTTAAACATG 59.426 43.478 0.00 0.00 37.29 3.21
848 990 9.159364 CTGACTTTGATTCATTCAGAAGATGTA 57.841 33.333 12.08 0.00 40.15 2.29
872 1014 2.315925 TTTATCTTGGCCTCGAGCTG 57.684 50.000 6.99 0.00 43.05 4.24
891 1033 8.916628 AGAGTAGAATCTTGAGAAAGCTTTTT 57.083 30.769 14.05 7.69 0.00 1.94
1019 1166 3.760035 GTTCCGCAGCGAGGAGGA 61.760 66.667 18.75 0.58 39.22 3.71
1033 1180 1.002792 GACGGTGGAGCTTTGTTGTTC 60.003 52.381 0.00 0.00 0.00 3.18
1095 1242 5.927281 AATTCCATCTTCTCCAATGGTTG 57.073 39.130 0.00 0.00 42.57 3.77
1219 1387 5.116084 AGATACATTGTACATTGCCAGGT 57.884 39.130 15.85 2.72 0.00 4.00
1278 1447 5.530915 TCACACTTTTTACCATCACCTTGAG 59.469 40.000 0.00 0.00 0.00 3.02
1283 1452 6.084326 ACAATCACACTTTTTACCATCACC 57.916 37.500 0.00 0.00 0.00 4.02
1284 1453 7.920682 AGAAACAATCACACTTTTTACCATCAC 59.079 33.333 0.00 0.00 0.00 3.06
1537 2801 9.394767 AGCTACAAAAACAATGAAGGAAAATTT 57.605 25.926 0.00 0.00 0.00 1.82
1640 2904 3.126001 TGTGGACTGCTGGTTTAGAAG 57.874 47.619 0.00 0.00 38.14 2.85
1651 3011 6.417930 GTCAAGTTTTAAGATTTGTGGACTGC 59.582 38.462 1.93 0.00 0.00 4.40
1667 3027 5.892348 AGATTGGTCATAGGGTCAAGTTTT 58.108 37.500 0.00 0.00 0.00 2.43
1834 3456 6.296026 ACTATTTGCAACTTCACCTACAGAA 58.704 36.000 0.00 0.00 0.00 3.02
1903 3528 5.449304 CAGAAAATGGTCAAACTTACGGTC 58.551 41.667 0.00 0.00 0.00 4.79
1970 3595 4.142730 ACTGCAATGAAGCGAAGAAATCTC 60.143 41.667 0.00 0.00 37.31 2.75
2000 3625 4.787551 TCAAACTTCCTTCTAAGGCACAA 58.212 39.130 3.73 0.00 46.06 3.33
2004 3629 4.214332 CACACTCAAACTTCCTTCTAAGGC 59.786 45.833 3.73 0.00 46.06 4.35
2123 3800 6.449698 ACAATTGGAAGCACAAGTTAATCAG 58.550 36.000 10.83 0.00 33.23 2.90
2157 3834 7.865706 AAGAGAAAGTTGTCACACTTAATGT 57.134 32.000 2.23 0.00 44.81 2.71
2169 3846 5.175859 TCGTGAACTGAAAGAGAAAGTTGT 58.824 37.500 0.00 0.00 37.43 3.32
2177 3854 7.818493 TCTCATAATTCGTGAACTGAAAGAG 57.182 36.000 0.00 0.00 37.43 2.85
2184 3861 7.323420 TGTCAAGATCTCATAATTCGTGAACT 58.677 34.615 0.00 0.00 31.39 3.01
2235 3912 7.202016 TGGACACAACTCTGAACATAATTTC 57.798 36.000 0.00 0.00 0.00 2.17
2239 3916 5.863965 TGATGGACACAACTCTGAACATAA 58.136 37.500 0.00 0.00 0.00 1.90
2248 3925 6.841443 CATCTTAGATGATGGACACAACTC 57.159 41.667 16.58 0.00 39.91 3.01
2261 3938 3.721035 TGTGCATCGACCATCTTAGATG 58.279 45.455 14.80 14.80 42.28 2.90
2265 3942 5.423886 TGTATTTGTGCATCGACCATCTTA 58.576 37.500 0.00 0.00 0.00 2.10
2266 3943 4.260985 TGTATTTGTGCATCGACCATCTT 58.739 39.130 0.00 0.00 0.00 2.40
2267 3944 3.872696 TGTATTTGTGCATCGACCATCT 58.127 40.909 0.00 0.00 0.00 2.90
2268 3945 4.818534 ATGTATTTGTGCATCGACCATC 57.181 40.909 0.00 0.00 0.00 3.51
2269 3946 6.882610 ATTATGTATTTGTGCATCGACCAT 57.117 33.333 0.00 0.00 0.00 3.55
2270 3947 7.213678 TCTATTATGTATTTGTGCATCGACCA 58.786 34.615 0.00 0.00 0.00 4.02
2271 3948 7.652300 TCTATTATGTATTTGTGCATCGACC 57.348 36.000 0.00 0.00 0.00 4.79
2296 3973 8.670135 CCGTATACAATGTTTGGAAGATGTTAA 58.330 33.333 3.32 0.00 34.12 2.01
2297 3974 7.825270 ACCGTATACAATGTTTGGAAGATGTTA 59.175 33.333 3.32 0.00 34.12 2.41
2298 3975 6.657541 ACCGTATACAATGTTTGGAAGATGTT 59.342 34.615 3.32 0.00 34.12 2.71
2299 3976 6.093495 CACCGTATACAATGTTTGGAAGATGT 59.907 38.462 3.32 0.00 34.12 3.06
2300 3977 6.315144 TCACCGTATACAATGTTTGGAAGATG 59.685 38.462 3.32 0.00 34.12 2.90
2301 3978 6.315393 GTCACCGTATACAATGTTTGGAAGAT 59.685 38.462 3.32 0.00 34.12 2.40
2302 3979 5.640357 GTCACCGTATACAATGTTTGGAAGA 59.360 40.000 3.32 0.00 34.12 2.87
2303 3980 5.410132 TGTCACCGTATACAATGTTTGGAAG 59.590 40.000 3.32 0.00 34.12 3.46
2304 3981 5.306394 TGTCACCGTATACAATGTTTGGAA 58.694 37.500 3.32 0.00 34.12 3.53
2305 3982 4.895961 TGTCACCGTATACAATGTTTGGA 58.104 39.130 3.32 0.00 34.12 3.53
2306 3983 4.932799 TCTGTCACCGTATACAATGTTTGG 59.067 41.667 3.32 0.00 34.12 3.28
2307 3984 5.445939 GCTCTGTCACCGTATACAATGTTTG 60.446 44.000 3.32 0.00 0.00 2.93
2308 3985 4.630069 GCTCTGTCACCGTATACAATGTTT 59.370 41.667 3.32 0.00 0.00 2.83
2309 3986 4.181578 GCTCTGTCACCGTATACAATGTT 58.818 43.478 3.32 0.00 0.00 2.71
2310 3987 3.194755 TGCTCTGTCACCGTATACAATGT 59.805 43.478 3.32 0.00 0.00 2.71
2311 3988 3.551890 GTGCTCTGTCACCGTATACAATG 59.448 47.826 3.32 0.39 0.00 2.82
2312 3989 3.447586 AGTGCTCTGTCACCGTATACAAT 59.552 43.478 3.32 0.00 37.68 2.71
2313 3990 2.823747 AGTGCTCTGTCACCGTATACAA 59.176 45.455 3.32 0.00 37.68 2.41
2314 3991 2.443416 AGTGCTCTGTCACCGTATACA 58.557 47.619 3.32 0.00 37.68 2.29
2315 3992 4.275196 TGATAGTGCTCTGTCACCGTATAC 59.725 45.833 10.71 0.00 37.00 1.47
2316 3993 4.457466 TGATAGTGCTCTGTCACCGTATA 58.543 43.478 10.71 0.00 37.00 1.47
2317 3994 3.288092 TGATAGTGCTCTGTCACCGTAT 58.712 45.455 10.71 0.00 37.00 3.06
2318 3995 2.718563 TGATAGTGCTCTGTCACCGTA 58.281 47.619 10.71 0.00 37.00 4.02
2319 3996 1.545841 TGATAGTGCTCTGTCACCGT 58.454 50.000 10.71 0.00 37.00 4.83
2320 3997 2.654749 TTGATAGTGCTCTGTCACCG 57.345 50.000 13.88 0.00 40.52 4.94
2321 3998 4.118410 CTGATTGATAGTGCTCTGTCACC 58.882 47.826 13.88 9.91 40.52 4.02
2322 3999 4.753233 ACTGATTGATAGTGCTCTGTCAC 58.247 43.478 13.88 5.66 40.52 3.67
2323 4000 5.451103 GCTACTGATTGATAGTGCTCTGTCA 60.451 44.000 10.71 10.71 39.42 3.58
2324 4001 4.981674 GCTACTGATTGATAGTGCTCTGTC 59.018 45.833 5.66 5.66 33.36 3.51
2325 4002 4.403752 TGCTACTGATTGATAGTGCTCTGT 59.596 41.667 0.00 0.00 0.00 3.41
2326 4003 4.941657 TGCTACTGATTGATAGTGCTCTG 58.058 43.478 0.00 0.00 0.00 3.35
2327 4004 5.804944 ATGCTACTGATTGATAGTGCTCT 57.195 39.130 0.00 0.00 0.00 4.09
2328 4005 5.987953 TCAATGCTACTGATTGATAGTGCTC 59.012 40.000 0.00 0.00 35.38 4.26
2329 4006 5.922053 TCAATGCTACTGATTGATAGTGCT 58.078 37.500 0.00 0.00 35.38 4.40
2330 4007 6.609237 TTCAATGCTACTGATTGATAGTGC 57.391 37.500 0.00 0.00 39.11 4.40
2331 4008 8.288208 GGATTTCAATGCTACTGATTGATAGTG 58.712 37.037 0.00 0.00 39.11 2.74
2332 4009 7.994911 TGGATTTCAATGCTACTGATTGATAGT 59.005 33.333 0.00 0.00 39.11 2.12
2333 4010 8.387190 TGGATTTCAATGCTACTGATTGATAG 57.613 34.615 0.00 0.00 39.11 2.08
2334 4011 8.750515 TTGGATTTCAATGCTACTGATTGATA 57.249 30.769 0.00 0.00 39.11 2.15
2335 4012 7.649533 TTGGATTTCAATGCTACTGATTGAT 57.350 32.000 0.00 0.00 39.11 2.57
2336 4013 7.465353 TTTGGATTTCAATGCTACTGATTGA 57.535 32.000 0.00 0.00 37.91 2.57
2337 4014 7.599621 TGTTTTGGATTTCAATGCTACTGATTG 59.400 33.333 0.00 0.00 34.98 2.67
2338 4015 7.669427 TGTTTTGGATTTCAATGCTACTGATT 58.331 30.769 0.00 0.00 34.98 2.57
2339 4016 7.230849 TGTTTTGGATTTCAATGCTACTGAT 57.769 32.000 0.00 0.00 34.98 2.90
2340 4017 6.647334 TGTTTTGGATTTCAATGCTACTGA 57.353 33.333 0.00 0.00 34.98 3.41
2341 4018 7.062605 GTCATGTTTTGGATTTCAATGCTACTG 59.937 37.037 0.00 0.00 34.98 2.74
2342 4019 7.092716 GTCATGTTTTGGATTTCAATGCTACT 58.907 34.615 0.00 0.00 34.98 2.57
2343 4020 6.867816 TGTCATGTTTTGGATTTCAATGCTAC 59.132 34.615 0.00 0.00 34.98 3.58
2344 4021 6.990798 TGTCATGTTTTGGATTTCAATGCTA 58.009 32.000 0.00 0.00 34.98 3.49
2345 4022 5.856156 TGTCATGTTTTGGATTTCAATGCT 58.144 33.333 0.00 0.00 34.98 3.79
2346 4023 6.424509 TCTTGTCATGTTTTGGATTTCAATGC 59.575 34.615 0.00 0.00 34.98 3.56
2347 4024 7.949903 TCTTGTCATGTTTTGGATTTCAATG 57.050 32.000 0.00 0.00 34.98 2.82
2348 4025 7.820872 GGATCTTGTCATGTTTTGGATTTCAAT 59.179 33.333 0.00 0.00 34.98 2.57
2349 4026 7.015487 AGGATCTTGTCATGTTTTGGATTTCAA 59.985 33.333 0.00 0.00 0.00 2.69
2350 4027 6.494491 AGGATCTTGTCATGTTTTGGATTTCA 59.506 34.615 0.00 0.00 0.00 2.69
2351 4028 6.810182 CAGGATCTTGTCATGTTTTGGATTTC 59.190 38.462 0.00 0.00 34.04 2.17
2352 4029 6.694447 CAGGATCTTGTCATGTTTTGGATTT 58.306 36.000 0.00 0.00 34.04 2.17
2353 4030 5.337009 GCAGGATCTTGTCATGTTTTGGATT 60.337 40.000 6.70 0.00 40.64 3.01
2354 4031 4.159135 GCAGGATCTTGTCATGTTTTGGAT 59.841 41.667 6.70 0.00 40.64 3.41
2355 4032 3.507233 GCAGGATCTTGTCATGTTTTGGA 59.493 43.478 6.70 0.00 40.64 3.53
2356 4033 3.256383 TGCAGGATCTTGTCATGTTTTGG 59.744 43.478 6.70 0.00 40.64 3.28
2357 4034 4.508461 TGCAGGATCTTGTCATGTTTTG 57.492 40.909 6.70 0.00 40.64 2.44
2358 4035 6.839124 TTATGCAGGATCTTGTCATGTTTT 57.161 33.333 18.37 2.93 40.64 2.43
2359 4036 6.183360 CCATTATGCAGGATCTTGTCATGTTT 60.183 38.462 18.37 6.41 40.64 2.83
2360 4037 5.301045 CCATTATGCAGGATCTTGTCATGTT 59.699 40.000 18.37 8.10 40.64 2.71
2361 4038 4.825634 CCATTATGCAGGATCTTGTCATGT 59.174 41.667 18.37 9.09 40.64 3.21
2362 4039 5.067954 TCCATTATGCAGGATCTTGTCATG 58.932 41.667 18.37 10.69 41.44 3.07
2363 4040 5.314718 TCCATTATGCAGGATCTTGTCAT 57.685 39.130 15.33 15.33 0.00 3.06
2364 4041 4.776435 TCCATTATGCAGGATCTTGTCA 57.224 40.909 6.70 5.65 0.00 3.58
2365 4042 9.624373 AATATATCCATTATGCAGGATCTTGTC 57.376 33.333 8.40 0.00 43.39 3.18
2366 4043 9.624373 GAATATATCCATTATGCAGGATCTTGT 57.376 33.333 8.40 0.00 43.39 3.16
2367 4044 9.623000 TGAATATATCCATTATGCAGGATCTTG 57.377 33.333 8.40 0.00 43.39 3.02
2395 4072 9.650539 CTCGAGATTTTGGAAGATCATGTATAT 57.349 33.333 6.58 0.00 0.00 0.86
2396 4073 8.642432 ACTCGAGATTTTGGAAGATCATGTATA 58.358 33.333 21.68 0.00 0.00 1.47
2397 4074 7.504403 ACTCGAGATTTTGGAAGATCATGTAT 58.496 34.615 21.68 0.00 0.00 2.29
2398 4075 6.878317 ACTCGAGATTTTGGAAGATCATGTA 58.122 36.000 21.68 0.00 0.00 2.29
2399 4076 5.738909 ACTCGAGATTTTGGAAGATCATGT 58.261 37.500 21.68 0.00 0.00 3.21
2400 4077 6.073873 GCTACTCGAGATTTTGGAAGATCATG 60.074 42.308 21.68 0.00 0.00 3.07
2401 4078 5.988561 GCTACTCGAGATTTTGGAAGATCAT 59.011 40.000 21.68 0.00 0.00 2.45
2402 4079 5.105351 TGCTACTCGAGATTTTGGAAGATCA 60.105 40.000 21.68 0.00 0.00 2.92
2403 4080 5.352284 TGCTACTCGAGATTTTGGAAGATC 58.648 41.667 21.68 0.00 0.00 2.75
2404 4081 5.344743 TGCTACTCGAGATTTTGGAAGAT 57.655 39.130 21.68 0.00 0.00 2.40
2405 4082 4.801330 TGCTACTCGAGATTTTGGAAGA 57.199 40.909 21.68 0.00 0.00 2.87
2406 4083 5.220739 CCAATGCTACTCGAGATTTTGGAAG 60.221 44.000 21.68 4.25 34.38 3.46
2407 4084 4.635765 CCAATGCTACTCGAGATTTTGGAA 59.364 41.667 21.68 0.00 34.38 3.53
2408 4085 4.081142 TCCAATGCTACTCGAGATTTTGGA 60.081 41.667 21.68 22.69 36.98 3.53
2409 4086 4.191544 TCCAATGCTACTCGAGATTTTGG 58.808 43.478 21.68 21.05 34.05 3.28
2410 4087 5.801350 TTCCAATGCTACTCGAGATTTTG 57.199 39.130 21.68 13.87 0.00 2.44
2411 4088 8.506168 TTAATTCCAATGCTACTCGAGATTTT 57.494 30.769 21.68 0.00 0.00 1.82
2412 4089 8.562892 CATTAATTCCAATGCTACTCGAGATTT 58.437 33.333 21.68 0.00 0.00 2.17
2413 4090 7.173907 CCATTAATTCCAATGCTACTCGAGATT 59.826 37.037 21.68 5.26 35.06 2.40
2414 4091 6.652481 CCATTAATTCCAATGCTACTCGAGAT 59.348 38.462 21.68 6.08 35.06 2.75
2415 4092 5.991606 CCATTAATTCCAATGCTACTCGAGA 59.008 40.000 21.68 1.61 35.06 4.04
2416 4093 5.991606 TCCATTAATTCCAATGCTACTCGAG 59.008 40.000 11.84 11.84 35.06 4.04
2417 4094 5.924356 TCCATTAATTCCAATGCTACTCGA 58.076 37.500 0.00 0.00 35.06 4.04
2418 4095 5.180117 CCTCCATTAATTCCAATGCTACTCG 59.820 44.000 0.00 0.00 35.06 4.18
2419 4096 5.474876 CCCTCCATTAATTCCAATGCTACTC 59.525 44.000 0.00 0.00 35.06 2.59
2420 4097 5.134339 TCCCTCCATTAATTCCAATGCTACT 59.866 40.000 0.00 0.00 35.06 2.57
2421 4098 5.385198 TCCCTCCATTAATTCCAATGCTAC 58.615 41.667 0.00 0.00 35.06 3.58
2422 4099 5.134339 ACTCCCTCCATTAATTCCAATGCTA 59.866 40.000 0.00 0.00 35.06 3.49
2423 4100 4.078980 ACTCCCTCCATTAATTCCAATGCT 60.079 41.667 0.00 0.00 35.06 3.79
2424 4101 4.218312 ACTCCCTCCATTAATTCCAATGC 58.782 43.478 0.00 0.00 35.06 3.56
2425 4102 7.006509 ACATACTCCCTCCATTAATTCCAATG 58.993 38.462 0.00 0.00 35.97 2.82
2426 4103 7.166758 ACATACTCCCTCCATTAATTCCAAT 57.833 36.000 0.00 0.00 0.00 3.16
2427 4104 6.590656 ACATACTCCCTCCATTAATTCCAA 57.409 37.500 0.00 0.00 0.00 3.53
2428 4105 6.849697 AGTACATACTCCCTCCATTAATTCCA 59.150 38.462 0.00 0.00 0.00 3.53
2429 4106 7.317722 AGTACATACTCCCTCCATTAATTCC 57.682 40.000 0.00 0.00 0.00 3.01
2436 4113 9.531158 GTAGTATTTAGTACATACTCCCTCCAT 57.469 37.037 11.41 0.00 38.26 3.41
2437 4114 8.505246 TGTAGTATTTAGTACATACTCCCTCCA 58.495 37.037 11.41 2.16 38.26 3.86
2438 4115 8.930846 TGTAGTATTTAGTACATACTCCCTCC 57.069 38.462 11.41 0.11 38.26 4.30
2501 4178 5.067674 TGCAGTTGAACTCTATGCACTTTTT 59.932 36.000 5.95 0.00 41.65 1.94
2502 4179 4.580167 TGCAGTTGAACTCTATGCACTTTT 59.420 37.500 5.95 0.00 41.65 2.27
2503 4180 4.136796 TGCAGTTGAACTCTATGCACTTT 58.863 39.130 5.95 0.00 41.65 2.66
2504 4181 3.743521 TGCAGTTGAACTCTATGCACTT 58.256 40.909 5.95 0.00 41.65 3.16
2505 4182 3.407424 TGCAGTTGAACTCTATGCACT 57.593 42.857 5.95 0.00 41.65 4.40
2506 4183 4.409570 CATTGCAGTTGAACTCTATGCAC 58.590 43.478 9.12 0.00 45.80 4.57
2507 4184 3.441222 CCATTGCAGTTGAACTCTATGCA 59.559 43.478 5.95 5.95 44.58 3.96
2508 4185 3.181493 CCCATTGCAGTTGAACTCTATGC 60.181 47.826 0.00 0.00 37.40 3.14
2509 4186 4.012374 ACCCATTGCAGTTGAACTCTATG 58.988 43.478 0.00 3.99 0.00 2.23
2510 4187 4.012374 CACCCATTGCAGTTGAACTCTAT 58.988 43.478 0.00 0.00 0.00 1.98
2511 4188 3.072330 TCACCCATTGCAGTTGAACTCTA 59.928 43.478 0.00 0.00 0.00 2.43
2512 4189 2.158623 TCACCCATTGCAGTTGAACTCT 60.159 45.455 0.00 0.00 0.00 3.24
2513 4190 2.229792 TCACCCATTGCAGTTGAACTC 58.770 47.619 0.00 0.00 0.00 3.01
2514 4191 2.363306 TCACCCATTGCAGTTGAACT 57.637 45.000 0.00 0.00 0.00 3.01
2515 4192 3.451141 TTTCACCCATTGCAGTTGAAC 57.549 42.857 0.59 0.00 0.00 3.18
2516 4193 4.100653 TCATTTTCACCCATTGCAGTTGAA 59.899 37.500 0.59 0.00 0.00 2.69
2517 4194 3.640498 TCATTTTCACCCATTGCAGTTGA 59.360 39.130 0.59 0.00 0.00 3.18
2518 4195 3.992643 TCATTTTCACCCATTGCAGTTG 58.007 40.909 0.00 0.00 0.00 3.16
2519 4196 4.686191 TTCATTTTCACCCATTGCAGTT 57.314 36.364 0.00 0.00 0.00 3.16
2520 4197 4.618927 CGATTCATTTTCACCCATTGCAGT 60.619 41.667 0.00 0.00 0.00 4.40
2521 4198 3.861113 CGATTCATTTTCACCCATTGCAG 59.139 43.478 0.00 0.00 0.00 4.41
2522 4199 3.509184 TCGATTCATTTTCACCCATTGCA 59.491 39.130 0.00 0.00 0.00 4.08
2523 4200 4.108699 TCGATTCATTTTCACCCATTGC 57.891 40.909 0.00 0.00 0.00 3.56
2524 4201 8.700722 TTATTTCGATTCATTTTCACCCATTG 57.299 30.769 0.00 0.00 0.00 2.82
2525 4202 9.369904 CTTTATTTCGATTCATTTTCACCCATT 57.630 29.630 0.00 0.00 0.00 3.16
2526 4203 7.981225 CCTTTATTTCGATTCATTTTCACCCAT 59.019 33.333 0.00 0.00 0.00 4.00
2527 4204 7.039363 ACCTTTATTTCGATTCATTTTCACCCA 60.039 33.333 0.00 0.00 0.00 4.51
2528 4205 7.320399 ACCTTTATTTCGATTCATTTTCACCC 58.680 34.615 0.00 0.00 0.00 4.61
2542 4219 5.064198 TGTCCGAGCAAATACCTTTATTTCG 59.936 40.000 0.00 0.00 36.00 3.46
2562 4239 8.803235 TCTAGTATATCCATACAACACATGTCC 58.197 37.037 0.00 0.00 42.70 4.02
2596 4273 1.823470 TTGTTGCTCTTGCTGGCGT 60.823 52.632 0.00 0.00 40.48 5.68
2618 4335 5.221803 ACTCAAGTGCTTGCTATATATGCCT 60.222 40.000 7.03 0.00 40.24 4.75
2658 4390 2.042433 CAAGGATAGTTTCCCCACCCAA 59.958 50.000 0.00 0.00 46.81 4.12
2880 4647 2.623416 TCAGCATCGTATGGATCGTCTT 59.377 45.455 0.00 0.00 31.28 3.01
2997 4764 2.048690 GAGGCGCCCGATCTCATC 60.049 66.667 26.15 7.69 0.00 2.92
2998 4765 3.620785 GGAGGCGCCCGATCTCAT 61.621 66.667 26.15 0.00 0.00 2.90
2999 4766 4.841617 AGGAGGCGCCCGATCTCA 62.842 66.667 26.15 0.00 37.37 3.27
3000 4767 3.984749 GAGGAGGCGCCCGATCTC 61.985 72.222 26.15 20.04 37.37 2.75
3001 4768 4.531426 AGAGGAGGCGCCCGATCT 62.531 66.667 26.15 20.55 37.37 2.75
3002 4769 3.984749 GAGAGGAGGCGCCCGATC 61.985 72.222 26.15 18.44 37.37 3.69
3028 4795 4.683334 GTTTGGTCCGCTGCGTGC 62.683 66.667 21.59 12.50 38.57 5.34
3029 4796 4.368808 CGTTTGGTCCGCTGCGTG 62.369 66.667 21.59 12.40 0.00 5.34
3036 4803 1.223187 AGTAAACAGCGTTTGGTCCG 58.777 50.000 14.23 0.00 0.00 4.79
3037 4804 3.703286 AAAGTAAACAGCGTTTGGTCC 57.297 42.857 14.23 0.00 0.00 4.46
3038 4805 4.203563 CGAAAAAGTAAACAGCGTTTGGTC 59.796 41.667 14.23 7.08 0.00 4.02
3039 4806 4.099824 CGAAAAAGTAAACAGCGTTTGGT 58.900 39.130 14.23 2.19 0.00 3.67
3040 4807 3.061469 GCGAAAAAGTAAACAGCGTTTGG 60.061 43.478 14.23 0.00 0.00 3.28
3041 4808 3.359345 CGCGAAAAAGTAAACAGCGTTTG 60.359 43.478 0.00 0.00 41.04 2.93
3042 4809 2.779471 CGCGAAAAAGTAAACAGCGTTT 59.221 40.909 0.00 10.61 41.04 3.60
3043 4810 2.030701 TCGCGAAAAAGTAAACAGCGTT 59.969 40.909 6.20 0.00 45.32 4.84
3044 4811 1.593933 TCGCGAAAAAGTAAACAGCGT 59.406 42.857 6.20 0.00 45.32 5.07
3045 4812 2.288365 TCGCGAAAAAGTAAACAGCG 57.712 45.000 6.20 0.20 46.29 5.18
3046 4813 4.256766 CGTATTCGCGAAAAAGTAAACAGC 59.743 41.667 27.23 0.55 0.00 4.40
3047 4814 5.869949 CGTATTCGCGAAAAAGTAAACAG 57.130 39.130 27.23 4.70 0.00 3.16
3062 4829 2.503943 ACGAAAGCTTTGCGTATTCG 57.496 45.000 25.01 19.13 43.55 3.34
3063 4830 3.123959 TGGTACGAAAGCTTTGCGTATTC 59.876 43.478 29.19 25.22 41.71 1.75
3064 4831 3.068560 TGGTACGAAAGCTTTGCGTATT 58.931 40.909 29.19 16.16 41.71 1.89
3065 4832 2.690786 TGGTACGAAAGCTTTGCGTAT 58.309 42.857 29.19 16.63 41.71 3.06
3066 4833 2.151881 TGGTACGAAAGCTTTGCGTA 57.848 45.000 25.94 25.94 39.24 4.42
3067 4834 1.519408 ATGGTACGAAAGCTTTGCGT 58.481 45.000 27.38 27.38 41.58 5.24
3068 4835 2.095969 TGAATGGTACGAAAGCTTTGCG 60.096 45.455 18.30 20.36 0.00 4.85
3069 4836 3.552604 TGAATGGTACGAAAGCTTTGC 57.447 42.857 18.30 7.46 0.00 3.68
3070 4837 9.438291 CTATAAATGAATGGTACGAAAGCTTTG 57.562 33.333 18.30 11.41 0.00 2.77
3071 4838 9.391006 TCTATAAATGAATGGTACGAAAGCTTT 57.609 29.630 12.53 12.53 0.00 3.51
3072 4839 8.958119 TCTATAAATGAATGGTACGAAAGCTT 57.042 30.769 0.00 0.00 0.00 3.74
3078 4845 9.749340 TCCTCTATCTATAAATGAATGGTACGA 57.251 33.333 0.00 0.00 0.00 3.43
3091 4858 9.521841 CACCTTGTACTCATCCTCTATCTATAA 57.478 37.037 0.00 0.00 0.00 0.98
3092 4859 8.891501 TCACCTTGTACTCATCCTCTATCTATA 58.108 37.037 0.00 0.00 0.00 1.31
3093 4860 7.760607 TCACCTTGTACTCATCCTCTATCTAT 58.239 38.462 0.00 0.00 0.00 1.98
3094 4861 7.150447 TCACCTTGTACTCATCCTCTATCTA 57.850 40.000 0.00 0.00 0.00 1.98
3095 4862 6.019656 TCACCTTGTACTCATCCTCTATCT 57.980 41.667 0.00 0.00 0.00 1.98
3096 4863 6.295011 CCATCACCTTGTACTCATCCTCTATC 60.295 46.154 0.00 0.00 0.00 2.08
3097 4864 5.541868 CCATCACCTTGTACTCATCCTCTAT 59.458 44.000 0.00 0.00 0.00 1.98
3098 4865 4.895889 CCATCACCTTGTACTCATCCTCTA 59.104 45.833 0.00 0.00 0.00 2.43
3099 4866 3.708631 CCATCACCTTGTACTCATCCTCT 59.291 47.826 0.00 0.00 0.00 3.69
3100 4867 3.452627 ACCATCACCTTGTACTCATCCTC 59.547 47.826 0.00 0.00 0.00 3.71
3101 4868 3.198635 CACCATCACCTTGTACTCATCCT 59.801 47.826 0.00 0.00 0.00 3.24
3102 4869 3.055094 ACACCATCACCTTGTACTCATCC 60.055 47.826 0.00 0.00 0.00 3.51
3103 4870 4.207891 ACACCATCACCTTGTACTCATC 57.792 45.455 0.00 0.00 0.00 2.92
3104 4871 4.640771 AACACCATCACCTTGTACTCAT 57.359 40.909 0.00 0.00 0.00 2.90
3105 4872 4.345547 TGTAACACCATCACCTTGTACTCA 59.654 41.667 0.00 0.00 0.00 3.41
3106 4873 4.689345 GTGTAACACCATCACCTTGTACTC 59.311 45.833 0.00 0.00 36.32 2.59
3107 4874 4.347000 AGTGTAACACCATCACCTTGTACT 59.653 41.667 0.00 0.00 41.43 2.73
3108 4875 4.451096 CAGTGTAACACCATCACCTTGTAC 59.549 45.833 0.00 0.00 41.43 2.90
3109 4876 4.345547 TCAGTGTAACACCATCACCTTGTA 59.654 41.667 0.00 0.00 41.43 2.41
3110 4877 3.135712 TCAGTGTAACACCATCACCTTGT 59.864 43.478 0.00 0.00 41.43 3.16
3111 4878 3.738982 TCAGTGTAACACCATCACCTTG 58.261 45.455 0.00 0.00 41.43 3.61
3112 4879 3.646162 TCTCAGTGTAACACCATCACCTT 59.354 43.478 0.00 0.00 41.43 3.50
3113 4880 3.239449 TCTCAGTGTAACACCATCACCT 58.761 45.455 0.00 0.00 41.43 4.00
3114 4881 3.258372 TCTCTCAGTGTAACACCATCACC 59.742 47.826 0.00 0.00 41.43 4.02
3115 4882 4.238514 GTCTCTCAGTGTAACACCATCAC 58.761 47.826 0.00 0.00 41.43 3.06
3116 4883 3.057526 CGTCTCTCAGTGTAACACCATCA 60.058 47.826 0.00 0.00 41.43 3.07
3117 4884 3.057456 ACGTCTCTCAGTGTAACACCATC 60.057 47.826 0.00 0.00 41.43 3.51
3118 4885 2.891580 ACGTCTCTCAGTGTAACACCAT 59.108 45.455 0.00 0.00 41.43 3.55
3119 4886 2.304092 ACGTCTCTCAGTGTAACACCA 58.696 47.619 0.00 0.00 41.43 4.17
3120 4887 3.251729 TGTACGTCTCTCAGTGTAACACC 59.748 47.826 0.00 0.00 41.43 4.16
3121 4888 4.217497 GTGTACGTCTCTCAGTGTAACAC 58.783 47.826 0.00 0.00 41.43 3.32
3122 4889 3.059393 CGTGTACGTCTCTCAGTGTAACA 60.059 47.826 0.00 0.00 34.81 2.41
3123 4890 3.477122 CGTGTACGTCTCTCAGTGTAAC 58.523 50.000 0.00 0.00 34.11 2.50
3124 4891 2.096069 GCGTGTACGTCTCTCAGTGTAA 60.096 50.000 6.27 0.00 42.22 2.41
3125 4892 1.462283 GCGTGTACGTCTCTCAGTGTA 59.538 52.381 6.27 0.00 42.22 2.90
3126 4893 0.237761 GCGTGTACGTCTCTCAGTGT 59.762 55.000 6.27 0.00 42.22 3.55
3127 4894 0.237498 TGCGTGTACGTCTCTCAGTG 59.763 55.000 6.27 0.00 42.22 3.66
3128 4895 0.949397 TTGCGTGTACGTCTCTCAGT 59.051 50.000 6.27 0.00 42.22 3.41
3129 4896 1.197036 TCTTGCGTGTACGTCTCTCAG 59.803 52.381 6.27 0.00 42.22 3.35
3130 4897 1.069432 GTCTTGCGTGTACGTCTCTCA 60.069 52.381 6.27 0.00 42.22 3.27
3131 4898 1.604396 GTCTTGCGTGTACGTCTCTC 58.396 55.000 6.27 0.00 42.22 3.20
3132 4899 0.110328 CGTCTTGCGTGTACGTCTCT 60.110 55.000 6.27 0.00 42.22 3.10
3133 4900 1.063951 CCGTCTTGCGTGTACGTCTC 61.064 60.000 6.27 0.00 42.22 3.36
3134 4901 1.081641 CCGTCTTGCGTGTACGTCT 60.082 57.895 6.27 0.00 42.22 4.18
3135 4902 2.713894 GCCGTCTTGCGTGTACGTC 61.714 63.158 6.27 0.00 42.22 4.34
3136 4903 2.732094 GCCGTCTTGCGTGTACGT 60.732 61.111 6.27 0.00 42.22 3.57
3144 4911 1.226547 CTCTCTCTCGCCGTCTTGC 60.227 63.158 0.00 0.00 0.00 4.01
3145 4912 0.805614 TTCTCTCTCTCGCCGTCTTG 59.194 55.000 0.00 0.00 0.00 3.02
3146 4913 0.806241 GTTCTCTCTCTCGCCGTCTT 59.194 55.000 0.00 0.00 0.00 3.01
3147 4914 0.321741 TGTTCTCTCTCTCGCCGTCT 60.322 55.000 0.00 0.00 0.00 4.18
3148 4915 0.179184 GTGTTCTCTCTCTCGCCGTC 60.179 60.000 0.00 0.00 0.00 4.79
3149 4916 1.587933 GGTGTTCTCTCTCTCGCCGT 61.588 60.000 0.00 0.00 0.00 5.68
3150 4917 1.137825 GGTGTTCTCTCTCTCGCCG 59.862 63.158 0.00 0.00 0.00 6.46
3151 4918 1.752683 TAGGTGTTCTCTCTCTCGCC 58.247 55.000 0.00 0.00 0.00 5.54
3152 4919 2.478879 GCTTAGGTGTTCTCTCTCTCGC 60.479 54.545 0.00 0.00 0.00 5.03
3153 4920 2.750166 TGCTTAGGTGTTCTCTCTCTCG 59.250 50.000 0.00 0.00 0.00 4.04
3154 4921 3.428862 GCTGCTTAGGTGTTCTCTCTCTC 60.429 52.174 0.00 0.00 0.00 3.20
3155 4922 2.495669 GCTGCTTAGGTGTTCTCTCTCT 59.504 50.000 0.00 0.00 0.00 3.10
3156 4923 2.232452 TGCTGCTTAGGTGTTCTCTCTC 59.768 50.000 0.00 0.00 0.00 3.20
3157 4924 2.251818 TGCTGCTTAGGTGTTCTCTCT 58.748 47.619 0.00 0.00 0.00 3.10
3158 4925 2.751166 TGCTGCTTAGGTGTTCTCTC 57.249 50.000 0.00 0.00 0.00 3.20
3159 4926 3.071602 TCTTTGCTGCTTAGGTGTTCTCT 59.928 43.478 0.00 0.00 0.00 3.10
3160 4927 3.403038 TCTTTGCTGCTTAGGTGTTCTC 58.597 45.455 0.00 0.00 0.00 2.87
3161 4928 3.071602 TCTCTTTGCTGCTTAGGTGTTCT 59.928 43.478 0.00 0.00 0.00 3.01
3162 4929 3.403038 TCTCTTTGCTGCTTAGGTGTTC 58.597 45.455 0.00 0.00 0.00 3.18
3163 4930 3.492102 TCTCTTTGCTGCTTAGGTGTT 57.508 42.857 0.00 0.00 0.00 3.32
3164 4931 3.406764 CTTCTCTTTGCTGCTTAGGTGT 58.593 45.455 0.00 0.00 0.00 4.16
3165 4932 2.746362 CCTTCTCTTTGCTGCTTAGGTG 59.254 50.000 0.00 0.00 0.00 4.00
3166 4933 2.290577 CCCTTCTCTTTGCTGCTTAGGT 60.291 50.000 0.00 0.00 0.00 3.08
3167 4934 2.363683 CCCTTCTCTTTGCTGCTTAGG 58.636 52.381 0.00 0.00 0.00 2.69
3168 4935 2.363683 CCCCTTCTCTTTGCTGCTTAG 58.636 52.381 0.00 0.00 0.00 2.18
3169 4936 1.614317 GCCCCTTCTCTTTGCTGCTTA 60.614 52.381 0.00 0.00 0.00 3.09
3170 4937 0.897401 GCCCCTTCTCTTTGCTGCTT 60.897 55.000 0.00 0.00 0.00 3.91
3171 4938 1.303970 GCCCCTTCTCTTTGCTGCT 60.304 57.895 0.00 0.00 0.00 4.24
3172 4939 1.303970 AGCCCCTTCTCTTTGCTGC 60.304 57.895 0.00 0.00 0.00 5.25
3173 4940 2.564471 CAGCCCCTTCTCTTTGCTG 58.436 57.895 0.00 0.00 42.85 4.41
3174 4941 1.303970 GCAGCCCCTTCTCTTTGCT 60.304 57.895 0.00 0.00 0.00 3.91
3175 4942 0.897401 AAGCAGCCCCTTCTCTTTGC 60.897 55.000 0.00 0.00 0.00 3.68
3176 4943 2.496899 TAAGCAGCCCCTTCTCTTTG 57.503 50.000 0.00 0.00 0.00 2.77
3177 4944 3.157881 GTTTAAGCAGCCCCTTCTCTTT 58.842 45.455 0.00 0.00 0.00 2.52
3178 4945 2.555448 GGTTTAAGCAGCCCCTTCTCTT 60.555 50.000 0.00 0.00 0.00 2.85
3179 4946 1.004862 GGTTTAAGCAGCCCCTTCTCT 59.995 52.381 0.00 0.00 0.00 3.10
3180 4947 1.464734 GGTTTAAGCAGCCCCTTCTC 58.535 55.000 0.00 0.00 0.00 2.87
3181 4948 0.039764 GGGTTTAAGCAGCCCCTTCT 59.960 55.000 0.00 0.00 36.46 2.85
3182 4949 0.039764 AGGGTTTAAGCAGCCCCTTC 59.960 55.000 0.35 0.00 45.37 3.46
3183 4950 1.285078 CTAGGGTTTAAGCAGCCCCTT 59.715 52.381 11.15 0.00 45.37 3.95
3184 4951 3.937980 AGGGTTTAAGCAGCCCCT 58.062 55.556 0.35 0.35 43.32 4.79
3185 4952 0.752009 GCTAGGGTTTAAGCAGCCCC 60.752 60.000 0.00 0.00 43.32 5.80
3186 4953 0.752009 GGCTAGGGTTTAAGCAGCCC 60.752 60.000 12.64 3.81 44.93 5.19
3187 4954 2.795165 GGCTAGGGTTTAAGCAGCC 58.205 57.895 9.23 9.23 44.54 4.85
3188 4955 1.095807 CGGGCTAGGGTTTAAGCAGC 61.096 60.000 0.00 0.00 40.61 5.25
3189 4956 0.252197 ACGGGCTAGGGTTTAAGCAG 59.748 55.000 0.00 0.00 40.61 4.24
3190 4957 0.251073 GACGGGCTAGGGTTTAAGCA 59.749 55.000 0.00 0.00 40.61 3.91
3191 4958 0.540454 AGACGGGCTAGGGTTTAAGC 59.460 55.000 0.00 0.00 38.03 3.09
3192 4959 4.684484 ATTAGACGGGCTAGGGTTTAAG 57.316 45.455 0.00 0.00 0.00 1.85
3193 4960 6.348498 GTTAATTAGACGGGCTAGGGTTTAA 58.652 40.000 0.00 0.00 0.00 1.52
3194 4961 5.163311 GGTTAATTAGACGGGCTAGGGTTTA 60.163 44.000 0.00 0.00 0.00 2.01
3195 4962 4.384537 GGTTAATTAGACGGGCTAGGGTTT 60.385 45.833 0.00 0.00 0.00 3.27
3196 4963 3.135348 GGTTAATTAGACGGGCTAGGGTT 59.865 47.826 0.00 0.00 0.00 4.11
3197 4964 2.702478 GGTTAATTAGACGGGCTAGGGT 59.298 50.000 0.00 0.00 0.00 4.34
3198 4965 2.288640 CGGTTAATTAGACGGGCTAGGG 60.289 54.545 0.00 0.00 0.00 3.53
3199 4966 2.288640 CCGGTTAATTAGACGGGCTAGG 60.289 54.545 17.42 0.00 42.48 3.02
3200 4967 3.022607 CCGGTTAATTAGACGGGCTAG 57.977 52.381 17.42 0.00 42.48 3.42
3206 4973 3.135414 TCGACACCGGTTAATTAGACG 57.865 47.619 2.97 4.98 36.24 4.18
3207 4974 4.675510 TCATCGACACCGGTTAATTAGAC 58.324 43.478 2.97 0.00 36.24 2.59
3208 4975 4.987408 TCATCGACACCGGTTAATTAGA 57.013 40.909 2.97 0.00 36.24 2.10
3209 4976 5.047847 ACATCATCGACACCGGTTAATTAG 58.952 41.667 2.97 0.00 36.24 1.73
3210 4977 5.013568 ACATCATCGACACCGGTTAATTA 57.986 39.130 2.97 0.00 36.24 1.40
3211 4978 3.869065 ACATCATCGACACCGGTTAATT 58.131 40.909 2.97 0.00 36.24 1.40
3212 4979 3.536956 ACATCATCGACACCGGTTAAT 57.463 42.857 2.97 0.00 36.24 1.40
3213 4980 2.997303 CAACATCATCGACACCGGTTAA 59.003 45.455 2.97 0.00 36.24 2.01
3214 4981 2.612604 CAACATCATCGACACCGGTTA 58.387 47.619 2.97 0.00 36.24 2.85
3215 4982 1.438651 CAACATCATCGACACCGGTT 58.561 50.000 2.97 0.00 36.24 4.44
3216 4983 0.391130 CCAACATCATCGACACCGGT 60.391 55.000 0.00 0.00 36.24 5.28
3217 4984 1.705337 GCCAACATCATCGACACCGG 61.705 60.000 0.00 0.00 36.24 5.28
3218 4985 1.018752 TGCCAACATCATCGACACCG 61.019 55.000 0.00 0.00 37.07 4.94
3219 4986 1.135689 GTTGCCAACATCATCGACACC 60.136 52.381 1.91 0.00 0.00 4.16
3220 4987 1.806542 AGTTGCCAACATCATCGACAC 59.193 47.619 10.69 0.00 0.00 3.67
3221 4988 2.076100 GAGTTGCCAACATCATCGACA 58.924 47.619 10.69 0.00 0.00 4.35
3222 4989 1.398390 GGAGTTGCCAACATCATCGAC 59.602 52.381 10.69 0.00 36.34 4.20
3223 4990 1.737838 GGAGTTGCCAACATCATCGA 58.262 50.000 10.69 0.00 36.34 3.59
3224 4991 0.374758 CGGAGTTGCCAACATCATCG 59.625 55.000 10.69 2.47 35.94 3.84
3225 4992 0.734889 CCGGAGTTGCCAACATCATC 59.265 55.000 10.69 0.00 35.94 2.92
3226 4993 0.038166 ACCGGAGTTGCCAACATCAT 59.962 50.000 9.46 0.00 35.94 2.45
3227 4994 0.179004 AACCGGAGTTGCCAACATCA 60.179 50.000 9.46 0.00 33.97 3.07
3228 4995 0.240945 CAACCGGAGTTGCCAACATC 59.759 55.000 9.46 4.60 46.43 3.06
3229 4996 2.340427 CAACCGGAGTTGCCAACAT 58.660 52.632 9.46 0.00 46.43 2.71
3230 4997 3.834726 CAACCGGAGTTGCCAACA 58.165 55.556 9.46 0.00 46.43 3.33
3250 5017 4.828296 GATGTGGGCCAGGGCAGG 62.828 72.222 16.36 0.00 44.11 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.