Multiple sequence alignment - TraesCS2B01G549300
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G549300 | chr2B | 100.000 | 3383 | 0 | 0 | 1 | 3383 | 745677748 | 745681130 | 0.000000e+00 | 6248.0 |
1 | TraesCS2B01G549300 | chr2B | 95.000 | 240 | 7 | 1 | 2937 | 3171 | 745680565 | 745680804 | 4.120000e-99 | 372.0 |
2 | TraesCS2B01G549300 | chr2B | 95.000 | 240 | 7 | 1 | 2818 | 3057 | 745680684 | 745680918 | 4.120000e-99 | 372.0 |
3 | TraesCS2B01G549300 | chr2B | 90.083 | 121 | 7 | 1 | 3056 | 3171 | 745680565 | 745680685 | 5.850000e-33 | 152.0 |
4 | TraesCS2B01G549300 | chr2B | 90.083 | 121 | 7 | 1 | 2818 | 2938 | 745680803 | 745680918 | 5.850000e-33 | 152.0 |
5 | TraesCS2B01G549300 | chr2B | 87.654 | 81 | 8 | 2 | 2 | 81 | 69982562 | 69982641 | 3.590000e-15 | 93.5 |
6 | TraesCS2B01G549300 | chr2A | 94.925 | 1202 | 61 | 0 | 975 | 2176 | 743072287 | 743073488 | 0.000000e+00 | 1882.0 |
7 | TraesCS2B01G549300 | chr2A | 98.462 | 975 | 14 | 1 | 1 | 975 | 743071247 | 743072220 | 0.000000e+00 | 1716.0 |
8 | TraesCS2B01G549300 | chr2A | 93.060 | 879 | 38 | 8 | 2066 | 2938 | 743073318 | 743074179 | 0.000000e+00 | 1264.0 |
9 | TraesCS2B01G549300 | chr2A | 90.598 | 351 | 10 | 4 | 3056 | 3383 | 743074054 | 743074404 | 8.610000e-121 | 444.0 |
10 | TraesCS2B01G549300 | chr2A | 92.857 | 126 | 4 | 2 | 2937 | 3057 | 743074054 | 743074179 | 9.650000e-41 | 178.0 |
11 | TraesCS2B01G549300 | chr3D | 93.617 | 94 | 4 | 1 | 273 | 364 | 291759505 | 291759412 | 4.550000e-29 | 139.0 |
12 | TraesCS2B01G549300 | chr3B | 93.617 | 94 | 4 | 1 | 273 | 364 | 384887506 | 384887413 | 4.550000e-29 | 139.0 |
13 | TraesCS2B01G549300 | chr3A | 89.362 | 94 | 7 | 2 | 273 | 364 | 384312965 | 384312873 | 7.670000e-22 | 115.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G549300 | chr2B | 745677748 | 745681130 | 3382 | False | 1459.2 | 6248 | 94.0332 | 1 | 3383 | 5 | chr2B.!!$F2 | 3382 |
1 | TraesCS2B01G549300 | chr2A | 743071247 | 743074404 | 3157 | False | 1096.8 | 1882 | 93.9804 | 1 | 3383 | 5 | chr2A.!!$F1 | 3382 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
268 | 269 | 1.323412 | GGTGTTGTTGCATGGGTGTA | 58.677 | 50.0 | 0.0 | 0.0 | 0.00 | 2.90 | F |
1498 | 1566 | 0.036732 | TCCTTTAGGTGCTGCTGTGG | 59.963 | 55.0 | 0.0 | 0.0 | 36.34 | 4.17 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1644 | 1712 | 0.035458 | CACTCCCGCAAACCTTCTCT | 59.965 | 55.0 | 0.0 | 0.0 | 0.0 | 3.10 | R |
2765 | 2833 | 0.178981 | ACCAGGACATGCTTGCTGTT | 60.179 | 50.0 | 0.0 | 0.0 | 0.0 | 3.16 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
204 | 205 | 5.288015 | TGGTGAAAATTAGTTGTGCATGTG | 58.712 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
268 | 269 | 1.323412 | GGTGTTGTTGCATGGGTGTA | 58.677 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
275 | 276 | 2.440247 | GCATGGGTGTAGGGGTGC | 60.440 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
560 | 561 | 6.986817 | ACTAGCCTGCATAATGTTACAGTTAG | 59.013 | 38.462 | 0.00 | 0.00 | 0.00 | 2.34 |
639 | 640 | 2.690326 | CCGTCCTGGGATTTAAGCG | 58.310 | 57.895 | 0.00 | 0.00 | 0.00 | 4.68 |
677 | 678 | 8.178313 | TGAACTCAACTCTGTAGAATGAGTAA | 57.822 | 34.615 | 20.94 | 14.07 | 44.76 | 2.24 |
681 | 682 | 7.040617 | ACTCAACTCTGTAGAATGAGTAACGAA | 60.041 | 37.037 | 19.98 | 0.00 | 44.25 | 3.85 |
941 | 942 | 3.096092 | GAGTCAGGAGTGGAGTGATTCT | 58.904 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
946 | 947 | 1.470632 | GGAGTGGAGTGATTCTGAGCG | 60.471 | 57.143 | 0.00 | 0.00 | 0.00 | 5.03 |
964 | 965 | 2.356278 | GCCACTGAATCTGGGCCA | 59.644 | 61.111 | 5.85 | 5.85 | 40.55 | 5.36 |
997 | 1065 | 2.830370 | CCCCCATTTCAGCCTCGC | 60.830 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
1004 | 1072 | 2.094597 | CCATTTCAGCCTCGCAAATGAA | 60.095 | 45.455 | 9.68 | 0.00 | 39.06 | 2.57 |
1009 | 1077 | 3.872696 | TCAGCCTCGCAAATGAAGATTA | 58.127 | 40.909 | 0.00 | 0.00 | 0.00 | 1.75 |
1059 | 1127 | 5.188434 | TCCCTACTTTCATCTGATGCAAAG | 58.812 | 41.667 | 24.69 | 24.69 | 35.48 | 2.77 |
1060 | 1128 | 4.946157 | CCCTACTTTCATCTGATGCAAAGT | 59.054 | 41.667 | 29.30 | 29.30 | 40.39 | 2.66 |
1062 | 1130 | 5.413833 | CCTACTTTCATCTGATGCAAAGTGT | 59.586 | 40.000 | 31.36 | 19.28 | 39.10 | 3.55 |
1088 | 1156 | 1.129326 | CCGTGTTTGTCTCGTCACTC | 58.871 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1218 | 1286 | 9.926158 | TCATGTAAATTTTTCTTGCATGTATGT | 57.074 | 25.926 | 11.61 | 0.00 | 43.37 | 2.29 |
1248 | 1316 | 4.843728 | TGTTTAGTTGGCATTCTAGGGAG | 58.156 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
1360 | 1428 | 2.290071 | CCTAAAAGCAAGGACGGAAGGA | 60.290 | 50.000 | 0.00 | 0.00 | 36.08 | 3.36 |
1386 | 1454 | 7.296098 | AGATCAATCCTTATCTTGCCAAGATT | 58.704 | 34.615 | 23.95 | 9.45 | 45.75 | 2.40 |
1403 | 1471 | 6.127366 | GCCAAGATTATCAAGATGAACCCAAA | 60.127 | 38.462 | 0.00 | 0.00 | 0.00 | 3.28 |
1472 | 1540 | 2.185004 | ACTGTGGAAAACCATCGGAG | 57.815 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
1498 | 1566 | 0.036732 | TCCTTTAGGTGCTGCTGTGG | 59.963 | 55.000 | 0.00 | 0.00 | 36.34 | 4.17 |
1529 | 1597 | 8.243961 | TCTAACCTGAGGATCTCTTATTCTTG | 57.756 | 38.462 | 4.99 | 0.00 | 34.92 | 3.02 |
1569 | 1637 | 3.266772 | TCAATATCCTGCCAAAGTCACCT | 59.733 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
1581 | 1649 | 1.807814 | AGTCACCTGGCTATAAGGGG | 58.192 | 55.000 | 0.00 | 0.00 | 39.82 | 4.79 |
1636 | 1704 | 8.147058 | GGATAGCAATAAGAGATCTTGTGAAGA | 58.853 | 37.037 | 5.34 | 0.00 | 42.69 | 2.87 |
1644 | 1712 | 6.672266 | AGAGATCTTGTGAAGAAGTTGGTA | 57.328 | 37.500 | 0.00 | 0.00 | 41.63 | 3.25 |
1648 | 1716 | 6.495181 | AGATCTTGTGAAGAAGTTGGTAGAGA | 59.505 | 38.462 | 0.00 | 0.00 | 41.63 | 3.10 |
1713 | 1781 | 1.214175 | TGGCTTGAGAAGTTGGGTGAA | 59.786 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
1732 | 1800 | 2.736670 | ACCTCAGCCACCAATATTCC | 57.263 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
1743 | 1811 | 8.489489 | CAGCCACCAATATTCCTGATACTATAT | 58.511 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
1791 | 1859 | 4.396790 | GCCCGTTTCTATTACCATGTTTCA | 59.603 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
1792 | 1860 | 5.106078 | GCCCGTTTCTATTACCATGTTTCAA | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
1809 | 1877 | 2.995283 | TCAATGGATCAGTTCTGCAGG | 58.005 | 47.619 | 15.13 | 0.00 | 0.00 | 4.85 |
1815 | 1883 | 2.419851 | GGATCAGTTCTGCAGGAAGGAG | 60.420 | 54.545 | 15.13 | 0.00 | 34.23 | 3.69 |
1836 | 1904 | 1.001181 | CCAAGGGGCAAGTTCAACATG | 59.999 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
1859 | 1927 | 9.691362 | CATGATTATGAATGATTCTGATTTGCA | 57.309 | 29.630 | 6.73 | 0.00 | 36.36 | 4.08 |
1864 | 1932 | 7.582667 | ATGAATGATTCTGATTTGCATGAGA | 57.417 | 32.000 | 6.73 | 0.00 | 0.00 | 3.27 |
1893 | 1961 | 6.331572 | TGAGAGAGATAGGTGACCTTAGAGAT | 59.668 | 42.308 | 10.53 | 0.00 | 34.61 | 2.75 |
1926 | 1994 | 4.265904 | TGCCGAACTGAATGAGTTTCTA | 57.734 | 40.909 | 0.00 | 0.00 | 45.48 | 2.10 |
1968 | 2036 | 0.251033 | ATGGAACTCAAGCAGCTGCA | 60.251 | 50.000 | 38.24 | 18.87 | 45.16 | 4.41 |
1969 | 2037 | 0.887836 | TGGAACTCAAGCAGCTGCAG | 60.888 | 55.000 | 38.24 | 28.51 | 45.16 | 4.41 |
2053 | 2121 | 2.674380 | CAGGCCAGCAGGGTCAAC | 60.674 | 66.667 | 5.01 | 0.00 | 46.80 | 3.18 |
2083 | 2151 | 2.674380 | CAGGCCAGCAGGGTCAAC | 60.674 | 66.667 | 5.01 | 0.00 | 46.80 | 3.18 |
2142 | 2210 | 3.177884 | ACAGGCCAGCAGGGTCAA | 61.178 | 61.111 | 5.01 | 0.00 | 46.80 | 3.18 |
2146 | 2214 | 2.985847 | GCCAGCAGGGTCAACCAC | 60.986 | 66.667 | 0.00 | 0.00 | 43.89 | 4.16 |
2176 | 2244 | 2.985847 | GCCAGCAGGGTCAACCAC | 60.986 | 66.667 | 0.00 | 0.00 | 43.89 | 4.16 |
2177 | 2245 | 2.282462 | CCAGCAGGGTCAACCACC | 60.282 | 66.667 | 0.89 | 0.00 | 45.97 | 4.61 |
2184 | 2252 | 2.985847 | GGTCAACCACCAGCAGCC | 60.986 | 66.667 | 0.00 | 0.00 | 45.98 | 4.85 |
2185 | 2253 | 2.203337 | GTCAACCACCAGCAGCCA | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 4.75 |
2186 | 2254 | 2.203337 | TCAACCACCAGCAGCCAC | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 5.01 |
2187 | 2255 | 2.519063 | CAACCACCAGCAGCCACA | 60.519 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
2188 | 2256 | 2.203394 | AACCACCAGCAGCCACAG | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 3.66 |
2189 | 2257 | 3.797507 | AACCACCAGCAGCCACAGG | 62.798 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
2200 | 2268 | 4.729918 | CCACAGGCCAGCAGGGTC | 62.730 | 72.222 | 5.01 | 0.00 | 43.70 | 4.46 |
2201 | 2269 | 3.957586 | CACAGGCCAGCAGGGTCA | 61.958 | 66.667 | 5.01 | 0.00 | 46.80 | 4.02 |
2202 | 2270 | 3.177884 | ACAGGCCAGCAGGGTCAA | 61.178 | 61.111 | 5.01 | 0.00 | 46.80 | 3.18 |
2203 | 2271 | 2.360852 | CAGGCCAGCAGGGTCAAG | 60.361 | 66.667 | 5.01 | 0.00 | 46.80 | 3.02 |
2204 | 2272 | 4.357279 | AGGCCAGCAGGGTCAAGC | 62.357 | 66.667 | 5.01 | 0.00 | 46.80 | 4.01 |
2205 | 2273 | 4.666253 | GGCCAGCAGGGTCAAGCA | 62.666 | 66.667 | 0.00 | 0.00 | 42.53 | 3.91 |
2206 | 2274 | 3.368571 | GCCAGCAGGGTCAAGCAC | 61.369 | 66.667 | 0.00 | 0.00 | 39.65 | 4.40 |
2207 | 2275 | 2.674380 | CCAGCAGGGTCAAGCACC | 60.674 | 66.667 | 0.00 | 0.00 | 45.97 | 5.01 |
2214 | 2282 | 2.985847 | GGTCAAGCACCACCAGCC | 60.986 | 66.667 | 0.00 | 0.00 | 45.98 | 4.85 |
2215 | 2283 | 2.203337 | GTCAAGCACCACCAGCCA | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 4.75 |
2216 | 2284 | 2.203337 | TCAAGCACCACCAGCCAC | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 5.01 |
2217 | 2285 | 2.519063 | CAAGCACCACCAGCCACA | 60.519 | 61.111 | 0.00 | 0.00 | 0.00 | 4.17 |
2218 | 2286 | 2.203394 | AAGCACCACCAGCCACAG | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 3.66 |
2219 | 2287 | 3.797507 | AAGCACCACCAGCCACAGG | 62.798 | 63.158 | 0.00 | 0.00 | 0.00 | 4.00 |
2230 | 2298 | 4.729918 | CCACAGGCCAGCAGGGTC | 62.730 | 72.222 | 5.01 | 0.00 | 43.70 | 4.46 |
2231 | 2299 | 3.957586 | CACAGGCCAGCAGGGTCA | 61.958 | 66.667 | 5.01 | 0.00 | 46.80 | 4.02 |
2232 | 2300 | 3.177884 | ACAGGCCAGCAGGGTCAA | 61.178 | 61.111 | 5.01 | 0.00 | 46.80 | 3.18 |
2233 | 2301 | 2.360852 | CAGGCCAGCAGGGTCAAG | 60.361 | 66.667 | 5.01 | 0.00 | 46.80 | 3.02 |
2234 | 2302 | 4.357279 | AGGCCAGCAGGGTCAAGC | 62.357 | 66.667 | 5.01 | 0.00 | 46.80 | 4.01 |
2235 | 2303 | 4.666253 | GGCCAGCAGGGTCAAGCA | 62.666 | 66.667 | 0.00 | 0.00 | 42.53 | 3.91 |
2236 | 2304 | 3.368571 | GCCAGCAGGGTCAAGCAC | 61.369 | 66.667 | 0.00 | 0.00 | 39.65 | 4.40 |
2237 | 2305 | 2.674380 | CCAGCAGGGTCAAGCACC | 60.674 | 66.667 | 0.00 | 0.00 | 45.97 | 5.01 |
2244 | 2312 | 4.251246 | GGTCAAGCACCACAACCA | 57.749 | 55.556 | 0.00 | 0.00 | 45.98 | 3.67 |
2271 | 2339 | 0.108585 | GAGGTGGCCAGAGTCAAACA | 59.891 | 55.000 | 5.11 | 0.00 | 0.00 | 2.83 |
2276 | 2344 | 2.030805 | GTGGCCAGAGTCAAACATTCAC | 60.031 | 50.000 | 5.11 | 0.00 | 0.00 | 3.18 |
2349 | 2417 | 0.482446 | TCCCACAAGGACAGGCATTT | 59.518 | 50.000 | 0.00 | 0.00 | 40.93 | 2.32 |
2365 | 2433 | 2.489722 | GCATTTCAAACTCAGGACCCTC | 59.510 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2380 | 2448 | 0.322277 | CCCTCATGCACTGCTTCAGT | 60.322 | 55.000 | 1.98 | 0.00 | 46.51 | 3.41 |
2401 | 2469 | 1.456287 | GCCAGACTCAAAGGTGGGT | 59.544 | 57.895 | 0.00 | 0.00 | 42.96 | 4.51 |
2454 | 2522 | 1.079612 | GCATGGCTGCCAGAAAACC | 60.080 | 57.895 | 27.20 | 7.31 | 42.88 | 3.27 |
2497 | 2565 | 3.309682 | TCAAAGATCGATGTTGAATCGCC | 59.690 | 43.478 | 8.76 | 0.00 | 40.95 | 5.54 |
2499 | 2567 | 1.067060 | AGATCGATGTTGAATCGCCGA | 59.933 | 47.619 | 0.54 | 0.00 | 40.95 | 5.54 |
2500 | 2568 | 1.453524 | GATCGATGTTGAATCGCCGAG | 59.546 | 52.381 | 0.54 | 0.00 | 40.95 | 4.63 |
2616 | 2684 | 1.604278 | GAGTGCTTGTTTGGTGAGACC | 59.396 | 52.381 | 0.00 | 0.00 | 39.22 | 3.85 |
2652 | 2720 | 6.698766 | GGAAATTTGCAATAGACCAGCATAAG | 59.301 | 38.462 | 0.00 | 0.00 | 38.19 | 1.73 |
2673 | 2741 | 9.726232 | CATAAGTATGATGTTCAACAAGAATGG | 57.274 | 33.333 | 0.00 | 0.00 | 35.77 | 3.16 |
2680 | 2748 | 6.430925 | TGATGTTCAACAAGAATGGGACTTAG | 59.569 | 38.462 | 0.00 | 0.00 | 38.76 | 2.18 |
2681 | 2749 | 5.935945 | TGTTCAACAAGAATGGGACTTAGA | 58.064 | 37.500 | 0.00 | 0.00 | 38.76 | 2.10 |
2704 | 2772 | 5.941555 | AGAACCAATCAACTAGTCCTAGG | 57.058 | 43.478 | 0.82 | 0.82 | 37.49 | 3.02 |
2706 | 2774 | 6.023603 | AGAACCAATCAACTAGTCCTAGGAA | 58.976 | 40.000 | 14.65 | 0.00 | 37.49 | 3.36 |
2710 | 2778 | 5.529060 | CCAATCAACTAGTCCTAGGAAATGC | 59.471 | 44.000 | 14.65 | 0.20 | 37.49 | 3.56 |
2714 | 2782 | 7.055667 | TCAACTAGTCCTAGGAAATGCTATG | 57.944 | 40.000 | 14.65 | 7.15 | 37.49 | 2.23 |
2761 | 2829 | 3.953766 | CATCAGTTGCTGCAAGATGATC | 58.046 | 45.455 | 27.39 | 12.72 | 38.62 | 2.92 |
2762 | 2830 | 2.362736 | TCAGTTGCTGCAAGATGATCC | 58.637 | 47.619 | 16.53 | 1.88 | 34.07 | 3.36 |
2763 | 2831 | 2.026542 | TCAGTTGCTGCAAGATGATCCT | 60.027 | 45.455 | 16.53 | 4.42 | 34.07 | 3.24 |
2764 | 2832 | 2.753452 | CAGTTGCTGCAAGATGATCCTT | 59.247 | 45.455 | 16.53 | 0.00 | 34.07 | 3.36 |
2765 | 2833 | 3.943381 | CAGTTGCTGCAAGATGATCCTTA | 59.057 | 43.478 | 16.53 | 0.00 | 34.07 | 2.69 |
2766 | 2834 | 4.397103 | CAGTTGCTGCAAGATGATCCTTAA | 59.603 | 41.667 | 16.53 | 0.00 | 34.07 | 1.85 |
2767 | 2835 | 4.397417 | AGTTGCTGCAAGATGATCCTTAAC | 59.603 | 41.667 | 16.53 | 0.00 | 34.07 | 2.01 |
2788 | 2856 | 0.321919 | GCAAGCATGTCCTGGTGAGA | 60.322 | 55.000 | 0.00 | 0.00 | 35.27 | 3.27 |
2789 | 2857 | 1.883638 | GCAAGCATGTCCTGGTGAGAA | 60.884 | 52.381 | 0.00 | 0.00 | 35.27 | 2.87 |
2790 | 2858 | 2.082231 | CAAGCATGTCCTGGTGAGAAG | 58.918 | 52.381 | 0.00 | 0.00 | 35.27 | 2.85 |
2830 | 2898 | 4.158764 | TGAACAATCCTGGTGAAACGTTTT | 59.841 | 37.500 | 15.89 | 0.00 | 38.12 | 2.43 |
2863 | 2931 | 2.898472 | ATCTGGTCCCTTCCCCGGAG | 62.898 | 65.000 | 0.73 | 0.00 | 39.44 | 4.63 |
2880 | 2948 | 3.722147 | CGGAGGAACTAATCTGGTGATG | 58.278 | 50.000 | 0.00 | 0.00 | 41.55 | 3.07 |
2881 | 2949 | 3.133003 | CGGAGGAACTAATCTGGTGATGT | 59.867 | 47.826 | 0.00 | 0.00 | 41.55 | 3.06 |
2882 | 2950 | 4.383118 | CGGAGGAACTAATCTGGTGATGTT | 60.383 | 45.833 | 0.00 | 0.00 | 41.55 | 2.71 |
2883 | 2951 | 5.119694 | GGAGGAACTAATCTGGTGATGTTC | 58.880 | 45.833 | 0.00 | 0.00 | 41.55 | 3.18 |
2884 | 2952 | 5.104735 | GGAGGAACTAATCTGGTGATGTTCT | 60.105 | 44.000 | 0.00 | 0.00 | 41.55 | 3.01 |
2885 | 2953 | 5.983540 | AGGAACTAATCTGGTGATGTTCTC | 58.016 | 41.667 | 0.00 | 0.00 | 36.58 | 2.87 |
2886 | 2954 | 5.723887 | AGGAACTAATCTGGTGATGTTCTCT | 59.276 | 40.000 | 0.00 | 0.00 | 36.58 | 3.10 |
2887 | 2955 | 6.897966 | AGGAACTAATCTGGTGATGTTCTCTA | 59.102 | 38.462 | 0.00 | 0.00 | 36.58 | 2.43 |
2888 | 2956 | 7.566879 | AGGAACTAATCTGGTGATGTTCTCTAT | 59.433 | 37.037 | 0.00 | 0.00 | 36.58 | 1.98 |
2889 | 2957 | 7.870445 | GGAACTAATCTGGTGATGTTCTCTATC | 59.130 | 40.741 | 0.00 | 0.00 | 36.58 | 2.08 |
2890 | 2958 | 7.296628 | ACTAATCTGGTGATGTTCTCTATCC | 57.703 | 40.000 | 0.00 | 0.00 | 32.44 | 2.59 |
2891 | 2959 | 6.841229 | ACTAATCTGGTGATGTTCTCTATCCA | 59.159 | 38.462 | 0.00 | 0.00 | 32.44 | 3.41 |
2892 | 2960 | 5.804944 | ATCTGGTGATGTTCTCTATCCAG | 57.195 | 43.478 | 0.00 | 0.00 | 38.28 | 3.86 |
2893 | 2961 | 4.614475 | TCTGGTGATGTTCTCTATCCAGT | 58.386 | 43.478 | 0.00 | 0.00 | 38.19 | 4.00 |
2894 | 2962 | 4.403752 | TCTGGTGATGTTCTCTATCCAGTG | 59.596 | 45.833 | 0.00 | 0.00 | 38.19 | 3.66 |
2895 | 2963 | 4.352893 | TGGTGATGTTCTCTATCCAGTGA | 58.647 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
2896 | 2964 | 4.964897 | TGGTGATGTTCTCTATCCAGTGAT | 59.035 | 41.667 | 0.00 | 0.00 | 34.87 | 3.06 |
2897 | 2965 | 5.163374 | TGGTGATGTTCTCTATCCAGTGATG | 60.163 | 44.000 | 0.00 | 0.00 | 32.18 | 3.07 |
2898 | 2966 | 5.163364 | GGTGATGTTCTCTATCCAGTGATGT | 60.163 | 44.000 | 0.00 | 0.00 | 32.18 | 3.06 |
2899 | 2967 | 6.040955 | GGTGATGTTCTCTATCCAGTGATGTA | 59.959 | 42.308 | 0.00 | 0.00 | 32.18 | 2.29 |
2900 | 2968 | 7.417911 | GGTGATGTTCTCTATCCAGTGATGTAA | 60.418 | 40.741 | 0.00 | 0.00 | 32.18 | 2.41 |
2901 | 2969 | 8.147058 | GTGATGTTCTCTATCCAGTGATGTAAT | 58.853 | 37.037 | 0.00 | 0.00 | 32.18 | 1.89 |
2902 | 2970 | 8.146412 | TGATGTTCTCTATCCAGTGATGTAATG | 58.854 | 37.037 | 0.00 | 0.00 | 32.18 | 1.90 |
2903 | 2971 | 6.820335 | TGTTCTCTATCCAGTGATGTAATGG | 58.180 | 40.000 | 0.00 | 0.00 | 45.82 | 3.16 |
2904 | 2972 | 6.384015 | TGTTCTCTATCCAGTGATGTAATGGT | 59.616 | 38.462 | 0.00 | 0.00 | 44.75 | 3.55 |
2905 | 2973 | 6.410942 | TCTCTATCCAGTGATGTAATGGTG | 57.589 | 41.667 | 0.00 | 0.00 | 44.75 | 4.17 |
2906 | 2974 | 4.960938 | TCTATCCAGTGATGTAATGGTGC | 58.039 | 43.478 | 0.00 | 0.00 | 44.75 | 5.01 |
2907 | 2975 | 3.939740 | ATCCAGTGATGTAATGGTGCT | 57.060 | 42.857 | 0.00 | 0.00 | 44.75 | 4.40 |
2908 | 2976 | 5.838521 | TCTATCCAGTGATGTAATGGTGCTA | 59.161 | 40.000 | 0.00 | 0.00 | 44.75 | 3.49 |
2909 | 2977 | 4.406648 | TCCAGTGATGTAATGGTGCTAG | 57.593 | 45.455 | 0.00 | 0.00 | 44.75 | 3.42 |
2910 | 2978 | 4.030216 | TCCAGTGATGTAATGGTGCTAGA | 58.970 | 43.478 | 0.00 | 0.00 | 44.75 | 2.43 |
2911 | 2979 | 4.469586 | TCCAGTGATGTAATGGTGCTAGAA | 59.530 | 41.667 | 0.00 | 0.00 | 44.75 | 2.10 |
2912 | 2980 | 4.572389 | CCAGTGATGTAATGGTGCTAGAAC | 59.428 | 45.833 | 0.00 | 0.00 | 39.66 | 3.01 |
2913 | 2981 | 5.423015 | CAGTGATGTAATGGTGCTAGAACT | 58.577 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
2914 | 2982 | 6.406961 | CCAGTGATGTAATGGTGCTAGAACTA | 60.407 | 42.308 | 0.00 | 0.00 | 39.66 | 2.24 |
2915 | 2983 | 7.212976 | CAGTGATGTAATGGTGCTAGAACTAT | 58.787 | 38.462 | 0.00 | 0.00 | 0.00 | 2.12 |
2916 | 2984 | 7.383572 | CAGTGATGTAATGGTGCTAGAACTATC | 59.616 | 40.741 | 0.00 | 0.00 | 0.00 | 2.08 |
2917 | 2985 | 7.069950 | AGTGATGTAATGGTGCTAGAACTATCA | 59.930 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
2918 | 2986 | 7.875041 | GTGATGTAATGGTGCTAGAACTATCAT | 59.125 | 37.037 | 0.00 | 0.90 | 0.00 | 2.45 |
2919 | 2987 | 8.432013 | TGATGTAATGGTGCTAGAACTATCATT | 58.568 | 33.333 | 0.00 | 4.83 | 0.00 | 2.57 |
2920 | 2988 | 9.277783 | GATGTAATGGTGCTAGAACTATCATTT | 57.722 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
2921 | 2989 | 8.437360 | TGTAATGGTGCTAGAACTATCATTTG | 57.563 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
2922 | 2990 | 6.382869 | AATGGTGCTAGAACTATCATTTGC | 57.617 | 37.500 | 0.00 | 0.00 | 0.00 | 3.68 |
2923 | 2991 | 4.842574 | TGGTGCTAGAACTATCATTTGCA | 58.157 | 39.130 | 0.00 | 0.00 | 0.00 | 4.08 |
2924 | 2992 | 4.635765 | TGGTGCTAGAACTATCATTTGCAC | 59.364 | 41.667 | 0.00 | 0.00 | 45.78 | 4.57 |
2925 | 2993 | 4.878397 | GGTGCTAGAACTATCATTTGCACT | 59.122 | 41.667 | 13.17 | 0.00 | 45.78 | 4.40 |
2926 | 2994 | 5.355350 | GGTGCTAGAACTATCATTTGCACTT | 59.645 | 40.000 | 13.17 | 0.00 | 45.78 | 3.16 |
2927 | 2995 | 6.127897 | GGTGCTAGAACTATCATTTGCACTTT | 60.128 | 38.462 | 13.17 | 0.00 | 45.78 | 2.66 |
2928 | 2996 | 6.744537 | GTGCTAGAACTATCATTTGCACTTTG | 59.255 | 38.462 | 0.00 | 0.00 | 43.95 | 2.77 |
2929 | 2997 | 6.430925 | TGCTAGAACTATCATTTGCACTTTGT | 59.569 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
2930 | 2998 | 7.040478 | TGCTAGAACTATCATTTGCACTTTGTT | 60.040 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
2931 | 2999 | 7.272084 | GCTAGAACTATCATTTGCACTTTGTTG | 59.728 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
2932 | 3000 | 7.275888 | AGAACTATCATTTGCACTTTGTTGA | 57.724 | 32.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2933 | 3001 | 7.365741 | AGAACTATCATTTGCACTTTGTTGAG | 58.634 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
2934 | 3002 | 5.464168 | ACTATCATTTGCACTTTGTTGAGC | 58.536 | 37.500 | 0.00 | 0.00 | 0.00 | 4.26 |
2935 | 3003 | 3.797451 | TCATTTGCACTTTGTTGAGCA | 57.203 | 38.095 | 0.00 | 0.00 | 34.79 | 4.26 |
2936 | 3004 | 4.325028 | TCATTTGCACTTTGTTGAGCAT | 57.675 | 36.364 | 0.00 | 0.00 | 36.80 | 3.79 |
2937 | 3005 | 4.052608 | TCATTTGCACTTTGTTGAGCATG | 58.947 | 39.130 | 0.00 | 0.00 | 36.80 | 4.06 |
2938 | 3006 | 2.512485 | TTGCACTTTGTTGAGCATGG | 57.488 | 45.000 | 0.00 | 0.00 | 36.80 | 3.66 |
2939 | 3007 | 1.401761 | TGCACTTTGTTGAGCATGGT | 58.598 | 45.000 | 0.00 | 0.00 | 31.05 | 3.55 |
2940 | 3008 | 1.067364 | TGCACTTTGTTGAGCATGGTG | 59.933 | 47.619 | 0.00 | 0.00 | 34.99 | 4.17 |
2941 | 3009 | 1.337703 | GCACTTTGTTGAGCATGGTGA | 59.662 | 47.619 | 0.00 | 0.00 | 34.31 | 4.02 |
2942 | 3010 | 2.223782 | GCACTTTGTTGAGCATGGTGAA | 60.224 | 45.455 | 0.00 | 0.00 | 34.31 | 3.18 |
2943 | 3011 | 3.737663 | GCACTTTGTTGAGCATGGTGAAA | 60.738 | 43.478 | 0.00 | 0.00 | 34.31 | 2.69 |
2944 | 3012 | 3.798337 | CACTTTGTTGAGCATGGTGAAAC | 59.202 | 43.478 | 0.00 | 7.61 | 34.31 | 2.78 |
2945 | 3013 | 3.446873 | ACTTTGTTGAGCATGGTGAAACA | 59.553 | 39.130 | 15.30 | 15.30 | 39.98 | 2.83 |
2946 | 3014 | 4.099881 | ACTTTGTTGAGCATGGTGAAACAT | 59.900 | 37.500 | 18.38 | 6.32 | 39.98 | 2.71 |
2947 | 3015 | 4.669206 | TTGTTGAGCATGGTGAAACATT | 57.331 | 36.364 | 18.38 | 0.00 | 39.98 | 2.71 |
2948 | 3016 | 4.669206 | TGTTGAGCATGGTGAAACATTT | 57.331 | 36.364 | 15.30 | 0.00 | 39.98 | 2.32 |
2949 | 3017 | 5.021033 | TGTTGAGCATGGTGAAACATTTT | 57.979 | 34.783 | 15.30 | 0.00 | 39.98 | 1.82 |
2950 | 3018 | 5.049167 | TGTTGAGCATGGTGAAACATTTTC | 58.951 | 37.500 | 15.30 | 0.00 | 39.98 | 2.29 |
2951 | 3019 | 4.255833 | TGAGCATGGTGAAACATTTTCC | 57.744 | 40.909 | 0.00 | 0.00 | 39.98 | 3.13 |
2952 | 3020 | 3.896888 | TGAGCATGGTGAAACATTTTCCT | 59.103 | 39.130 | 0.00 | 0.00 | 39.98 | 3.36 |
2953 | 3021 | 4.344679 | TGAGCATGGTGAAACATTTTCCTT | 59.655 | 37.500 | 0.00 | 0.00 | 39.98 | 3.36 |
2954 | 3022 | 5.163322 | TGAGCATGGTGAAACATTTTCCTTT | 60.163 | 36.000 | 0.00 | 0.00 | 39.98 | 3.11 |
2955 | 3023 | 5.683681 | AGCATGGTGAAACATTTTCCTTTT | 58.316 | 33.333 | 0.00 | 0.00 | 39.98 | 2.27 |
2956 | 3024 | 5.759763 | AGCATGGTGAAACATTTTCCTTTTC | 59.240 | 36.000 | 0.00 | 0.00 | 39.98 | 2.29 |
2957 | 3025 | 5.049474 | GCATGGTGAAACATTTTCCTTTTCC | 60.049 | 40.000 | 0.00 | 0.00 | 39.98 | 3.13 |
2958 | 3026 | 5.948742 | TGGTGAAACATTTTCCTTTTCCT | 57.051 | 34.783 | 0.00 | 0.00 | 39.98 | 3.36 |
2959 | 3027 | 5.912892 | TGGTGAAACATTTTCCTTTTCCTC | 58.087 | 37.500 | 0.00 | 0.00 | 39.98 | 3.71 |
2960 | 3028 | 5.660864 | TGGTGAAACATTTTCCTTTTCCTCT | 59.339 | 36.000 | 0.00 | 0.00 | 39.98 | 3.69 |
2961 | 3029 | 6.156083 | TGGTGAAACATTTTCCTTTTCCTCTT | 59.844 | 34.615 | 0.00 | 0.00 | 39.98 | 2.85 |
2962 | 3030 | 6.479990 | GGTGAAACATTTTCCTTTTCCTCTTG | 59.520 | 38.462 | 0.00 | 0.00 | 39.98 | 3.02 |
2963 | 3031 | 7.264947 | GTGAAACATTTTCCTTTTCCTCTTGA | 58.735 | 34.615 | 0.00 | 0.00 | 36.32 | 3.02 |
2964 | 3032 | 7.928167 | GTGAAACATTTTCCTTTTCCTCTTGAT | 59.072 | 33.333 | 0.00 | 0.00 | 36.32 | 2.57 |
2965 | 3033 | 8.143835 | TGAAACATTTTCCTTTTCCTCTTGATC | 58.856 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
2966 | 3034 | 7.846101 | AACATTTTCCTTTTCCTCTTGATCT | 57.154 | 32.000 | 0.00 | 0.00 | 0.00 | 2.75 |
2967 | 3035 | 7.224522 | ACATTTTCCTTTTCCTCTTGATCTG | 57.775 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2968 | 3036 | 6.210185 | ACATTTTCCTTTTCCTCTTGATCTGG | 59.790 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
2969 | 3037 | 5.324832 | TTTCCTTTTCCTCTTGATCTGGT | 57.675 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
2970 | 3038 | 4.559862 | TCCTTTTCCTCTTGATCTGGTC | 57.440 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
2971 | 3039 | 3.264450 | TCCTTTTCCTCTTGATCTGGTCC | 59.736 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
2972 | 3040 | 3.615155 | CTTTTCCTCTTGATCTGGTCCC | 58.385 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2973 | 3041 | 2.649742 | TTCCTCTTGATCTGGTCCCT | 57.350 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2974 | 3042 | 2.649742 | TCCTCTTGATCTGGTCCCTT | 57.350 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2975 | 3043 | 2.472029 | TCCTCTTGATCTGGTCCCTTC | 58.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
2976 | 3044 | 1.488393 | CCTCTTGATCTGGTCCCTTCC | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 3.46 |
2977 | 3045 | 1.488393 | CTCTTGATCTGGTCCCTTCCC | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 3.97 |
2978 | 3046 | 0.548510 | CTTGATCTGGTCCCTTCCCC | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
3057 | 3125 | 2.512485 | TTGCACTTTGTTGAGCATGG | 57.488 | 45.000 | 0.00 | 0.00 | 36.80 | 3.66 |
3058 | 3126 | 1.401761 | TGCACTTTGTTGAGCATGGT | 58.598 | 45.000 | 0.00 | 0.00 | 31.05 | 3.55 |
3059 | 3127 | 1.067364 | TGCACTTTGTTGAGCATGGTG | 59.933 | 47.619 | 0.00 | 0.00 | 34.99 | 4.17 |
3060 | 3128 | 1.337703 | GCACTTTGTTGAGCATGGTGA | 59.662 | 47.619 | 0.00 | 0.00 | 34.31 | 4.02 |
3061 | 3129 | 2.223782 | GCACTTTGTTGAGCATGGTGAA | 60.224 | 45.455 | 0.00 | 0.00 | 34.31 | 3.18 |
3062 | 3130 | 3.737663 | GCACTTTGTTGAGCATGGTGAAA | 60.738 | 43.478 | 0.00 | 0.00 | 34.31 | 2.69 |
3063 | 3131 | 3.798337 | CACTTTGTTGAGCATGGTGAAAC | 59.202 | 43.478 | 0.00 | 7.61 | 34.31 | 2.78 |
3064 | 3132 | 3.446873 | ACTTTGTTGAGCATGGTGAAACA | 59.553 | 39.130 | 15.30 | 15.30 | 39.98 | 2.83 |
3065 | 3133 | 4.099881 | ACTTTGTTGAGCATGGTGAAACAT | 59.900 | 37.500 | 18.38 | 6.32 | 39.98 | 2.71 |
3066 | 3134 | 4.669206 | TTGTTGAGCATGGTGAAACATT | 57.331 | 36.364 | 18.38 | 0.00 | 39.98 | 2.71 |
3067 | 3135 | 4.669206 | TGTTGAGCATGGTGAAACATTT | 57.331 | 36.364 | 15.30 | 0.00 | 39.98 | 2.32 |
3068 | 3136 | 5.021033 | TGTTGAGCATGGTGAAACATTTT | 57.979 | 34.783 | 15.30 | 0.00 | 39.98 | 1.82 |
3069 | 3137 | 5.049167 | TGTTGAGCATGGTGAAACATTTTC | 58.951 | 37.500 | 15.30 | 0.00 | 39.98 | 2.29 |
3070 | 3138 | 4.255833 | TGAGCATGGTGAAACATTTTCC | 57.744 | 40.909 | 0.00 | 0.00 | 39.98 | 3.13 |
3071 | 3139 | 3.896888 | TGAGCATGGTGAAACATTTTCCT | 59.103 | 39.130 | 0.00 | 0.00 | 39.98 | 3.36 |
3072 | 3140 | 4.344679 | TGAGCATGGTGAAACATTTTCCTT | 59.655 | 37.500 | 0.00 | 0.00 | 39.98 | 3.36 |
3073 | 3141 | 5.163322 | TGAGCATGGTGAAACATTTTCCTTT | 60.163 | 36.000 | 0.00 | 0.00 | 39.98 | 3.11 |
3074 | 3142 | 5.683681 | AGCATGGTGAAACATTTTCCTTTT | 58.316 | 33.333 | 0.00 | 0.00 | 39.98 | 2.27 |
3075 | 3143 | 5.759763 | AGCATGGTGAAACATTTTCCTTTTC | 59.240 | 36.000 | 0.00 | 0.00 | 39.98 | 2.29 |
3076 | 3144 | 5.049474 | GCATGGTGAAACATTTTCCTTTTCC | 60.049 | 40.000 | 0.00 | 0.00 | 39.98 | 3.13 |
3077 | 3145 | 5.948742 | TGGTGAAACATTTTCCTTTTCCT | 57.051 | 34.783 | 0.00 | 0.00 | 39.98 | 3.36 |
3078 | 3146 | 5.912892 | TGGTGAAACATTTTCCTTTTCCTC | 58.087 | 37.500 | 0.00 | 0.00 | 39.98 | 3.71 |
3079 | 3147 | 5.660864 | TGGTGAAACATTTTCCTTTTCCTCT | 59.339 | 36.000 | 0.00 | 0.00 | 39.98 | 3.69 |
3080 | 3148 | 6.156083 | TGGTGAAACATTTTCCTTTTCCTCTT | 59.844 | 34.615 | 0.00 | 0.00 | 39.98 | 2.85 |
3081 | 3149 | 6.479990 | GGTGAAACATTTTCCTTTTCCTCTTG | 59.520 | 38.462 | 0.00 | 0.00 | 39.98 | 3.02 |
3082 | 3150 | 7.264947 | GTGAAACATTTTCCTTTTCCTCTTGA | 58.735 | 34.615 | 0.00 | 0.00 | 36.32 | 3.02 |
3083 | 3151 | 7.928167 | GTGAAACATTTTCCTTTTCCTCTTGAT | 59.072 | 33.333 | 0.00 | 0.00 | 36.32 | 2.57 |
3084 | 3152 | 8.143835 | TGAAACATTTTCCTTTTCCTCTTGATC | 58.856 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
3085 | 3153 | 7.846101 | AACATTTTCCTTTTCCTCTTGATCT | 57.154 | 32.000 | 0.00 | 0.00 | 0.00 | 2.75 |
3086 | 3154 | 7.224522 | ACATTTTCCTTTTCCTCTTGATCTG | 57.775 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3087 | 3155 | 6.210185 | ACATTTTCCTTTTCCTCTTGATCTGG | 59.790 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
3088 | 3156 | 5.324832 | TTTCCTTTTCCTCTTGATCTGGT | 57.675 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
3089 | 3157 | 4.559862 | TCCTTTTCCTCTTGATCTGGTC | 57.440 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
3090 | 3158 | 3.264450 | TCCTTTTCCTCTTGATCTGGTCC | 59.736 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
3091 | 3159 | 3.615155 | CTTTTCCTCTTGATCTGGTCCC | 58.385 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3092 | 3160 | 2.649742 | TTCCTCTTGATCTGGTCCCT | 57.350 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3093 | 3161 | 2.649742 | TCCTCTTGATCTGGTCCCTT | 57.350 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
3094 | 3162 | 2.472029 | TCCTCTTGATCTGGTCCCTTC | 58.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
3095 | 3163 | 1.488393 | CCTCTTGATCTGGTCCCTTCC | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 3.46 |
3096 | 3164 | 1.488393 | CTCTTGATCTGGTCCCTTCCC | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 3.97 |
3097 | 3165 | 0.548510 | CTTGATCTGGTCCCTTCCCC | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
3098 | 3166 | 1.271840 | TTGATCTGGTCCCTTCCCCG | 61.272 | 60.000 | 0.00 | 0.00 | 0.00 | 5.73 |
3099 | 3167 | 2.366972 | ATCTGGTCCCTTCCCCGG | 60.367 | 66.667 | 0.00 | 0.00 | 0.00 | 5.73 |
3100 | 3168 | 2.891307 | GATCTGGTCCCTTCCCCGGA | 62.891 | 65.000 | 0.73 | 0.00 | 40.33 | 5.14 |
3101 | 3169 | 2.898472 | ATCTGGTCCCTTCCCCGGAG | 62.898 | 65.000 | 0.73 | 0.00 | 39.44 | 4.63 |
3118 | 3186 | 4.882671 | CGGAGGAACTAATTTGGTCATG | 57.117 | 45.455 | 7.25 | 0.00 | 41.55 | 3.07 |
3119 | 3187 | 4.261801 | CGGAGGAACTAATTTGGTCATGT | 58.738 | 43.478 | 7.25 | 0.00 | 41.55 | 3.21 |
3120 | 3188 | 4.700213 | CGGAGGAACTAATTTGGTCATGTT | 59.300 | 41.667 | 7.25 | 0.00 | 41.55 | 2.71 |
3121 | 3189 | 5.163754 | CGGAGGAACTAATTTGGTCATGTTC | 60.164 | 44.000 | 7.25 | 0.00 | 41.55 | 3.18 |
3122 | 3190 | 5.946377 | GGAGGAACTAATTTGGTCATGTTCT | 59.054 | 40.000 | 7.25 | 0.00 | 41.55 | 3.01 |
3123 | 3191 | 6.094186 | GGAGGAACTAATTTGGTCATGTTCTC | 59.906 | 42.308 | 7.25 | 3.97 | 41.55 | 2.87 |
3124 | 3192 | 6.784031 | AGGAACTAATTTGGTCATGTTCTCT | 58.216 | 36.000 | 7.25 | 0.00 | 36.02 | 3.10 |
3125 | 3193 | 7.918076 | AGGAACTAATTTGGTCATGTTCTCTA | 58.082 | 34.615 | 7.25 | 0.00 | 36.02 | 2.43 |
3126 | 3194 | 8.552296 | AGGAACTAATTTGGTCATGTTCTCTAT | 58.448 | 33.333 | 7.25 | 0.00 | 36.02 | 1.98 |
3127 | 3195 | 8.831550 | GGAACTAATTTGGTCATGTTCTCTATC | 58.168 | 37.037 | 7.25 | 0.00 | 35.52 | 2.08 |
3128 | 3196 | 8.738645 | AACTAATTTGGTCATGTTCTCTATCC | 57.261 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
3129 | 3197 | 7.861629 | ACTAATTTGGTCATGTTCTCTATCCA | 58.138 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
3130 | 3198 | 7.989741 | ACTAATTTGGTCATGTTCTCTATCCAG | 59.010 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
3131 | 3199 | 5.762179 | TTTGGTCATGTTCTCTATCCAGT | 57.238 | 39.130 | 0.00 | 0.00 | 0.00 | 4.00 |
3132 | 3200 | 4.743057 | TGGTCATGTTCTCTATCCAGTG | 57.257 | 45.455 | 0.00 | 0.00 | 0.00 | 3.66 |
3133 | 3201 | 4.352893 | TGGTCATGTTCTCTATCCAGTGA | 58.647 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
3134 | 3202 | 4.964897 | TGGTCATGTTCTCTATCCAGTGAT | 59.035 | 41.667 | 0.00 | 0.00 | 34.87 | 3.06 |
3135 | 3203 | 5.163374 | TGGTCATGTTCTCTATCCAGTGATG | 60.163 | 44.000 | 0.00 | 0.00 | 32.18 | 3.07 |
3136 | 3204 | 5.163364 | GGTCATGTTCTCTATCCAGTGATGT | 60.163 | 44.000 | 0.00 | 0.00 | 32.18 | 3.06 |
3137 | 3205 | 6.040955 | GGTCATGTTCTCTATCCAGTGATGTA | 59.959 | 42.308 | 0.00 | 0.00 | 32.18 | 2.29 |
3138 | 3206 | 7.417911 | GGTCATGTTCTCTATCCAGTGATGTAA | 60.418 | 40.741 | 0.00 | 0.00 | 32.18 | 2.41 |
3139 | 3207 | 8.147058 | GTCATGTTCTCTATCCAGTGATGTAAT | 58.853 | 37.037 | 0.00 | 0.00 | 32.18 | 1.89 |
3140 | 3208 | 8.146412 | TCATGTTCTCTATCCAGTGATGTAATG | 58.854 | 37.037 | 0.00 | 0.00 | 32.18 | 1.90 |
3141 | 3209 | 6.820335 | TGTTCTCTATCCAGTGATGTAATGG | 58.180 | 40.000 | 0.00 | 0.00 | 45.82 | 3.16 |
3142 | 3210 | 6.384015 | TGTTCTCTATCCAGTGATGTAATGGT | 59.616 | 38.462 | 0.00 | 0.00 | 44.75 | 3.55 |
3143 | 3211 | 6.410942 | TCTCTATCCAGTGATGTAATGGTG | 57.589 | 41.667 | 0.00 | 0.00 | 44.75 | 4.17 |
3144 | 3212 | 4.960938 | TCTATCCAGTGATGTAATGGTGC | 58.039 | 43.478 | 0.00 | 0.00 | 44.75 | 5.01 |
3145 | 3213 | 3.939740 | ATCCAGTGATGTAATGGTGCT | 57.060 | 42.857 | 0.00 | 0.00 | 44.75 | 4.40 |
3146 | 3214 | 5.838521 | TCTATCCAGTGATGTAATGGTGCTA | 59.161 | 40.000 | 0.00 | 0.00 | 44.75 | 3.49 |
3147 | 3215 | 4.406648 | TCCAGTGATGTAATGGTGCTAG | 57.593 | 45.455 | 0.00 | 0.00 | 44.75 | 3.42 |
3148 | 3216 | 4.030216 | TCCAGTGATGTAATGGTGCTAGA | 58.970 | 43.478 | 0.00 | 0.00 | 44.75 | 2.43 |
3149 | 3217 | 4.122776 | CCAGTGATGTAATGGTGCTAGAC | 58.877 | 47.826 | 0.00 | 0.00 | 39.66 | 2.59 |
3150 | 3218 | 4.383010 | CCAGTGATGTAATGGTGCTAGACA | 60.383 | 45.833 | 0.00 | 0.00 | 39.66 | 3.41 |
3151 | 3219 | 5.363101 | CAGTGATGTAATGGTGCTAGACAT | 58.637 | 41.667 | 0.00 | 0.00 | 33.52 | 3.06 |
3152 | 3220 | 5.819379 | CAGTGATGTAATGGTGCTAGACATT | 59.181 | 40.000 | 11.01 | 11.01 | 40.21 | 2.71 |
3153 | 3221 | 6.317140 | CAGTGATGTAATGGTGCTAGACATTT | 59.683 | 38.462 | 11.36 | 0.00 | 38.24 | 2.32 |
3154 | 3222 | 6.317140 | AGTGATGTAATGGTGCTAGACATTTG | 59.683 | 38.462 | 11.36 | 0.00 | 38.24 | 2.32 |
3155 | 3223 | 4.963276 | TGTAATGGTGCTAGACATTTGC | 57.037 | 40.909 | 11.36 | 7.37 | 38.24 | 3.68 |
3156 | 3224 | 4.331108 | TGTAATGGTGCTAGACATTTGCA | 58.669 | 39.130 | 11.36 | 9.13 | 38.24 | 4.08 |
3162 | 3230 | 3.287312 | TGCTAGACATTTGCACTTTGC | 57.713 | 42.857 | 0.00 | 0.00 | 45.29 | 3.68 |
3163 | 3231 | 2.030007 | TGCTAGACATTTGCACTTTGCC | 60.030 | 45.455 | 0.00 | 0.00 | 44.23 | 4.52 |
3164 | 3232 | 2.855180 | CTAGACATTTGCACTTTGCCG | 58.145 | 47.619 | 0.00 | 0.00 | 44.23 | 5.69 |
3165 | 3233 | 1.317613 | AGACATTTGCACTTTGCCGA | 58.682 | 45.000 | 0.00 | 0.00 | 44.23 | 5.54 |
3166 | 3234 | 1.267806 | AGACATTTGCACTTTGCCGAG | 59.732 | 47.619 | 0.00 | 0.00 | 44.23 | 4.63 |
3167 | 3235 | 0.318955 | ACATTTGCACTTTGCCGAGC | 60.319 | 50.000 | 0.00 | 0.00 | 44.23 | 5.03 |
3168 | 3236 | 0.318869 | CATTTGCACTTTGCCGAGCA | 60.319 | 50.000 | 0.00 | 0.00 | 44.23 | 4.26 |
3169 | 3237 | 0.604578 | ATTTGCACTTTGCCGAGCAT | 59.395 | 45.000 | 0.00 | 0.00 | 44.23 | 3.79 |
3170 | 3238 | 0.318869 | TTTGCACTTTGCCGAGCATG | 60.319 | 50.000 | 0.00 | 0.00 | 44.23 | 4.06 |
3343 | 3424 | 2.973694 | AAATGATCCCATGCACTTGC | 57.026 | 45.000 | 0.00 | 0.00 | 42.50 | 4.01 |
3365 | 3446 | 6.457355 | TGCTGAGCAATACAAATGTTTTGAT | 58.543 | 32.000 | 17.27 | 12.52 | 38.63 | 2.57 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
204 | 205 | 1.181098 | ATCACACTGGCAGGGCAAAC | 61.181 | 55.000 | 18.59 | 0.00 | 0.00 | 2.93 |
268 | 269 | 2.042639 | GCAATGGATGGCACCCCT | 60.043 | 61.111 | 0.00 | 0.00 | 0.00 | 4.79 |
275 | 276 | 4.524316 | TGAACTTTGAAGCAATGGATGG | 57.476 | 40.909 | 0.00 | 0.00 | 0.00 | 3.51 |
314 | 315 | 8.132362 | AGCTCGAATATTAGAGTGACTAAGTTG | 58.868 | 37.037 | 21.92 | 0.00 | 43.16 | 3.16 |
581 | 582 | 5.843673 | TTGCCAAGAAAGTTCATTACACA | 57.156 | 34.783 | 0.00 | 0.00 | 0.00 | 3.72 |
639 | 640 | 6.881602 | AGAGTTGAGTTCATTTCTACCCAATC | 59.118 | 38.462 | 0.00 | 0.00 | 0.00 | 2.67 |
677 | 678 | 2.930826 | AGAACCAGTGTGGATTTCGT | 57.069 | 45.000 | 0.00 | 0.00 | 40.96 | 3.85 |
681 | 682 | 2.597455 | CCCAAAGAACCAGTGTGGATT | 58.403 | 47.619 | 0.00 | 0.00 | 40.96 | 3.01 |
895 | 896 | 2.328099 | GCTCCTGGACGCAACAAGG | 61.328 | 63.158 | 11.62 | 0.00 | 0.00 | 3.61 |
941 | 942 | 1.078918 | CAGATTCAGTGGCCGCTCA | 60.079 | 57.895 | 18.11 | 0.00 | 0.00 | 4.26 |
964 | 965 | 3.656869 | GGGGGAGGACCTCACTATT | 57.343 | 57.895 | 23.17 | 0.00 | 40.60 | 1.73 |
995 | 1063 | 5.499652 | GCAAACTGCATAATCTTCATTTGCG | 60.500 | 40.000 | 0.00 | 0.00 | 44.26 | 4.85 |
1009 | 1077 | 6.687333 | TATCCTCCGGAAAGCAAACTGCAT | 62.687 | 45.833 | 5.23 | 0.00 | 39.90 | 3.96 |
1033 | 1101 | 3.557595 | GCATCAGATGAAAGTAGGGAACG | 59.442 | 47.826 | 15.12 | 0.00 | 0.00 | 3.95 |
1041 | 1109 | 5.068636 | AGACACTTTGCATCAGATGAAAGT | 58.931 | 37.500 | 22.49 | 22.49 | 39.20 | 2.66 |
1042 | 1110 | 5.624344 | AGACACTTTGCATCAGATGAAAG | 57.376 | 39.130 | 15.12 | 19.43 | 35.48 | 2.62 |
1059 | 1127 | 2.870411 | AGACAAACACGGCTTAAGACAC | 59.130 | 45.455 | 9.49 | 0.00 | 0.00 | 3.67 |
1060 | 1128 | 3.128349 | GAGACAAACACGGCTTAAGACA | 58.872 | 45.455 | 9.49 | 0.00 | 0.00 | 3.41 |
1062 | 1130 | 2.223876 | ACGAGACAAACACGGCTTAAGA | 60.224 | 45.455 | 6.67 | 0.00 | 36.94 | 2.10 |
1111 | 1179 | 6.418101 | ACATTGCATTACTCACTGGATAAGT | 58.582 | 36.000 | 0.00 | 0.00 | 40.93 | 2.24 |
1113 | 1181 | 8.046708 | ACTTACATTGCATTACTCACTGGATAA | 58.953 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
1122 | 1190 | 8.915654 | CCAAGAAAAACTTACATTGCATTACTC | 58.084 | 33.333 | 0.00 | 0.00 | 37.03 | 2.59 |
1248 | 1316 | 2.168521 | TCCAAGATCCTTCATGTCGACC | 59.831 | 50.000 | 14.12 | 0.00 | 0.00 | 4.79 |
1360 | 1428 | 6.666678 | TCTTGGCAAGATAAGGATTGATCTT | 58.333 | 36.000 | 25.38 | 0.00 | 41.96 | 2.40 |
1386 | 1454 | 7.552050 | AACCATTTTTGGGTTCATCTTGATA | 57.448 | 32.000 | 0.00 | 0.00 | 45.26 | 2.15 |
1440 | 1508 | 3.637911 | TCCACAGTAATAACCGCCAAT | 57.362 | 42.857 | 0.00 | 0.00 | 0.00 | 3.16 |
1498 | 1566 | 5.570320 | AGAGATCCTCAGGTTAGATAGCTC | 58.430 | 45.833 | 0.00 | 0.00 | 32.06 | 4.09 |
1528 | 1596 | 3.879998 | TGAGCAAGACAAACTTACCACA | 58.120 | 40.909 | 0.00 | 0.00 | 37.03 | 4.17 |
1529 | 1597 | 4.893424 | TTGAGCAAGACAAACTTACCAC | 57.107 | 40.909 | 0.00 | 0.00 | 37.03 | 4.16 |
1569 | 1637 | 2.771943 | CAGAGTCAACCCCTTATAGCCA | 59.228 | 50.000 | 0.00 | 0.00 | 0.00 | 4.75 |
1575 | 1643 | 1.771854 | TGTTGCAGAGTCAACCCCTTA | 59.228 | 47.619 | 4.46 | 0.00 | 44.15 | 2.69 |
1636 | 1704 | 3.139077 | CGCAAACCTTCTCTACCAACTT | 58.861 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
1644 | 1712 | 0.035458 | CACTCCCGCAAACCTTCTCT | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 3.10 |
1648 | 1716 | 1.528309 | CACCACTCCCGCAAACCTT | 60.528 | 57.895 | 0.00 | 0.00 | 0.00 | 3.50 |
1713 | 1781 | 2.092212 | CAGGAATATTGGTGGCTGAGGT | 60.092 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1732 | 1800 | 8.282455 | AGGAACACGGTATGATATAGTATCAG | 57.718 | 38.462 | 5.94 | 0.00 | 0.00 | 2.90 |
1743 | 1811 | 4.201657 | TCGATCTTAGGAACACGGTATGA | 58.798 | 43.478 | 0.00 | 0.00 | 0.00 | 2.15 |
1791 | 1859 | 3.618351 | CTTCCTGCAGAACTGATCCATT | 58.382 | 45.455 | 17.39 | 0.00 | 0.00 | 3.16 |
1792 | 1860 | 2.092538 | CCTTCCTGCAGAACTGATCCAT | 60.093 | 50.000 | 17.39 | 0.00 | 0.00 | 3.41 |
1836 | 1904 | 9.908152 | TCATGCAAATCAGAATCATTCATAATC | 57.092 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
1859 | 1927 | 4.768448 | CACCTATCTCTCTCAGCATCTCAT | 59.232 | 45.833 | 0.00 | 0.00 | 0.00 | 2.90 |
1864 | 1932 | 3.117169 | AGGTCACCTATCTCTCTCAGCAT | 60.117 | 47.826 | 0.00 | 0.00 | 28.47 | 3.79 |
1872 | 1940 | 6.102615 | ACAGATCTCTAAGGTCACCTATCTCT | 59.897 | 42.308 | 0.00 | 0.00 | 31.13 | 3.10 |
1893 | 1961 | 2.875933 | CAGTTCGGCAAGGTTTAACAGA | 59.124 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1968 | 2036 | 2.489073 | CCCGCCCTTTGGATATTTAGCT | 60.489 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
1969 | 2037 | 1.886542 | CCCGCCCTTTGGATATTTAGC | 59.113 | 52.381 | 0.00 | 0.00 | 0.00 | 3.09 |
2136 | 2204 | 2.985847 | GCTGCTGGTGGTTGACCC | 60.986 | 66.667 | 0.00 | 0.00 | 45.45 | 4.46 |
2137 | 2205 | 2.985847 | GGCTGCTGGTGGTTGACC | 60.986 | 66.667 | 0.00 | 0.00 | 46.37 | 4.02 |
2142 | 2210 | 4.275508 | CCTGTGGCTGCTGGTGGT | 62.276 | 66.667 | 0.00 | 0.00 | 0.00 | 4.16 |
2183 | 2251 | 4.729918 | GACCCTGCTGGCCTGTGG | 62.730 | 72.222 | 11.69 | 13.03 | 37.83 | 4.17 |
2184 | 2252 | 3.496309 | TTGACCCTGCTGGCCTGTG | 62.496 | 63.158 | 11.69 | 4.81 | 37.83 | 3.66 |
2185 | 2253 | 3.177884 | TTGACCCTGCTGGCCTGT | 61.178 | 61.111 | 11.69 | 0.00 | 37.83 | 4.00 |
2186 | 2254 | 2.360852 | CTTGACCCTGCTGGCCTG | 60.361 | 66.667 | 3.32 | 4.26 | 37.83 | 4.85 |
2187 | 2255 | 4.357279 | GCTTGACCCTGCTGGCCT | 62.357 | 66.667 | 3.32 | 0.00 | 37.83 | 5.19 |
2188 | 2256 | 4.666253 | TGCTTGACCCTGCTGGCC | 62.666 | 66.667 | 3.63 | 0.00 | 37.83 | 5.36 |
2189 | 2257 | 3.368571 | GTGCTTGACCCTGCTGGC | 61.369 | 66.667 | 3.63 | 0.00 | 37.83 | 4.85 |
2190 | 2258 | 2.674380 | GGTGCTTGACCCTGCTGG | 60.674 | 66.667 | 1.89 | 1.89 | 39.10 | 4.85 |
2191 | 2259 | 2.113774 | TGGTGCTTGACCCTGCTG | 59.886 | 61.111 | 0.00 | 0.00 | 45.45 | 4.41 |
2192 | 2260 | 2.113986 | GTGGTGCTTGACCCTGCT | 59.886 | 61.111 | 0.00 | 0.00 | 45.45 | 4.24 |
2193 | 2261 | 2.985847 | GGTGGTGCTTGACCCTGC | 60.986 | 66.667 | 0.00 | 0.00 | 45.45 | 4.85 |
2194 | 2262 | 1.601759 | CTGGTGGTGCTTGACCCTG | 60.602 | 63.158 | 0.00 | 0.00 | 45.45 | 4.45 |
2195 | 2263 | 2.839098 | CTGGTGGTGCTTGACCCT | 59.161 | 61.111 | 0.00 | 0.00 | 45.45 | 4.34 |
2196 | 2264 | 2.985847 | GCTGGTGGTGCTTGACCC | 60.986 | 66.667 | 0.00 | 0.00 | 45.45 | 4.46 |
2197 | 2265 | 2.985847 | GGCTGGTGGTGCTTGACC | 60.986 | 66.667 | 0.00 | 0.00 | 46.37 | 4.02 |
2198 | 2266 | 2.203337 | TGGCTGGTGGTGCTTGAC | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 3.18 |
2199 | 2267 | 2.203337 | GTGGCTGGTGGTGCTTGA | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 3.02 |
2200 | 2268 | 2.519063 | TGTGGCTGGTGGTGCTTG | 60.519 | 61.111 | 0.00 | 0.00 | 0.00 | 4.01 |
2201 | 2269 | 2.203394 | CTGTGGCTGGTGGTGCTT | 60.203 | 61.111 | 0.00 | 0.00 | 0.00 | 3.91 |
2202 | 2270 | 4.275508 | CCTGTGGCTGGTGGTGCT | 62.276 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
2213 | 2281 | 4.729918 | GACCCTGCTGGCCTGTGG | 62.730 | 72.222 | 11.69 | 13.03 | 37.83 | 4.17 |
2214 | 2282 | 3.496309 | TTGACCCTGCTGGCCTGTG | 62.496 | 63.158 | 11.69 | 4.81 | 37.83 | 3.66 |
2215 | 2283 | 3.177884 | TTGACCCTGCTGGCCTGT | 61.178 | 61.111 | 11.69 | 0.00 | 37.83 | 4.00 |
2216 | 2284 | 2.360852 | CTTGACCCTGCTGGCCTG | 60.361 | 66.667 | 3.32 | 4.26 | 37.83 | 4.85 |
2217 | 2285 | 4.357279 | GCTTGACCCTGCTGGCCT | 62.357 | 66.667 | 3.32 | 0.00 | 37.83 | 5.19 |
2218 | 2286 | 4.666253 | TGCTTGACCCTGCTGGCC | 62.666 | 66.667 | 3.63 | 0.00 | 37.83 | 5.36 |
2219 | 2287 | 3.368571 | GTGCTTGACCCTGCTGGC | 61.369 | 66.667 | 3.63 | 0.00 | 37.83 | 4.85 |
2220 | 2288 | 2.674380 | GGTGCTTGACCCTGCTGG | 60.674 | 66.667 | 1.89 | 1.89 | 39.10 | 4.85 |
2221 | 2289 | 2.113774 | TGGTGCTTGACCCTGCTG | 59.886 | 61.111 | 0.00 | 0.00 | 45.45 | 4.41 |
2222 | 2290 | 2.113986 | GTGGTGCTTGACCCTGCT | 59.886 | 61.111 | 0.00 | 0.00 | 45.45 | 4.24 |
2223 | 2291 | 1.827789 | TTGTGGTGCTTGACCCTGC | 60.828 | 57.895 | 0.00 | 0.00 | 45.45 | 4.85 |
2224 | 2292 | 1.455383 | GGTTGTGGTGCTTGACCCTG | 61.455 | 60.000 | 0.00 | 0.00 | 45.45 | 4.45 |
2225 | 2293 | 1.152756 | GGTTGTGGTGCTTGACCCT | 60.153 | 57.895 | 0.00 | 0.00 | 45.45 | 4.34 |
2226 | 2294 | 1.454847 | TGGTTGTGGTGCTTGACCC | 60.455 | 57.895 | 0.00 | 0.00 | 45.45 | 4.46 |
2227 | 2295 | 2.032981 | CTGGTTGTGGTGCTTGACC | 58.967 | 57.895 | 0.00 | 0.00 | 46.37 | 4.02 |
2228 | 2296 | 1.103398 | AGCTGGTTGTGGTGCTTGAC | 61.103 | 55.000 | 0.00 | 0.00 | 30.96 | 3.18 |
2229 | 2297 | 1.102809 | CAGCTGGTTGTGGTGCTTGA | 61.103 | 55.000 | 5.57 | 0.00 | 33.03 | 3.02 |
2230 | 2298 | 1.361271 | CAGCTGGTTGTGGTGCTTG | 59.639 | 57.895 | 5.57 | 0.00 | 33.03 | 4.01 |
2231 | 2299 | 3.846180 | CAGCTGGTTGTGGTGCTT | 58.154 | 55.556 | 5.57 | 0.00 | 33.03 | 3.91 |
2234 | 2302 | 2.610694 | CGAGCAGCTGGTTGTGGTG | 61.611 | 63.158 | 21.18 | 2.60 | 36.18 | 4.17 |
2235 | 2303 | 2.281070 | CGAGCAGCTGGTTGTGGT | 60.281 | 61.111 | 21.18 | 0.00 | 0.00 | 4.16 |
2236 | 2304 | 2.031012 | TCGAGCAGCTGGTTGTGG | 59.969 | 61.111 | 27.96 | 14.83 | 0.00 | 4.17 |
2237 | 2305 | 2.031516 | CCTCGAGCAGCTGGTTGTG | 61.032 | 63.158 | 27.96 | 25.16 | 0.00 | 3.33 |
2238 | 2306 | 2.345244 | CCTCGAGCAGCTGGTTGT | 59.655 | 61.111 | 27.96 | 0.00 | 0.00 | 3.32 |
2239 | 2307 | 2.031516 | CACCTCGAGCAGCTGGTTG | 61.032 | 63.158 | 24.53 | 24.53 | 0.00 | 3.77 |
2240 | 2308 | 2.345244 | CACCTCGAGCAGCTGGTT | 59.655 | 61.111 | 21.18 | 0.00 | 0.00 | 3.67 |
2241 | 2309 | 3.699894 | CCACCTCGAGCAGCTGGT | 61.700 | 66.667 | 20.31 | 20.31 | 0.00 | 4.00 |
2271 | 2339 | 4.702131 | GGTGGAGCATTACTTGAAGTGAAT | 59.298 | 41.667 | 8.33 | 1.64 | 0.00 | 2.57 |
2276 | 2344 | 3.411446 | TGTGGTGGAGCATTACTTGAAG | 58.589 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
2349 | 2417 | 1.003580 | GCATGAGGGTCCTGAGTTTGA | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
2365 | 2433 | 0.731417 | GCCTACTGAAGCAGTGCATG | 59.269 | 55.000 | 19.20 | 6.51 | 45.01 | 4.06 |
2380 | 2448 | 0.984230 | CCACCTTTGAGTCTGGCCTA | 59.016 | 55.000 | 3.32 | 0.00 | 0.00 | 3.93 |
2448 | 2516 | 4.009370 | AGAGAAGCCTACACAGGTTTTC | 57.991 | 45.455 | 0.00 | 0.00 | 44.68 | 2.29 |
2454 | 2522 | 5.240891 | TGAATGAAAGAGAAGCCTACACAG | 58.759 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
2497 | 2565 | 7.573916 | AATAGACGATCTGAATAATTGCTCG | 57.426 | 36.000 | 0.00 | 0.00 | 0.00 | 5.03 |
2499 | 2567 | 8.768955 | GTGAAATAGACGATCTGAATAATTGCT | 58.231 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
2500 | 2568 | 7.737744 | CGTGAAATAGACGATCTGAATAATTGC | 59.262 | 37.037 | 0.00 | 0.00 | 39.21 | 3.56 |
2616 | 2684 | 2.299582 | TGCAAATTTCCATGTGTCCCTG | 59.700 | 45.455 | 0.00 | 0.00 | 0.00 | 4.45 |
2652 | 2720 | 6.375455 | AGTCCCATTCTTGTTGAACATCATAC | 59.625 | 38.462 | 0.00 | 0.00 | 37.52 | 2.39 |
2673 | 2741 | 7.387643 | ACTAGTTGATTGGTTCTTCTAAGTCC | 58.612 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
2680 | 2748 | 6.154706 | TCCTAGGACTAGTTGATTGGTTCTTC | 59.845 | 42.308 | 7.62 | 0.00 | 0.00 | 2.87 |
2681 | 2749 | 6.023603 | TCCTAGGACTAGTTGATTGGTTCTT | 58.976 | 40.000 | 7.62 | 0.00 | 0.00 | 2.52 |
2710 | 2778 | 1.134007 | TGTCATCAGGGGCTTGCATAG | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 2.23 |
2714 | 2782 | 0.322816 | TCTTGTCATCAGGGGCTTGC | 60.323 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2758 | 2826 | 3.065925 | GGACATGCTTGCTGTTAAGGATC | 59.934 | 47.826 | 0.00 | 0.00 | 36.72 | 3.36 |
2759 | 2827 | 3.019564 | GGACATGCTTGCTGTTAAGGAT | 58.980 | 45.455 | 0.00 | 0.00 | 38.98 | 3.24 |
2761 | 2829 | 2.163010 | CAGGACATGCTTGCTGTTAAGG | 59.837 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2762 | 2830 | 2.163010 | CCAGGACATGCTTGCTGTTAAG | 59.837 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2763 | 2831 | 2.161855 | CCAGGACATGCTTGCTGTTAA | 58.838 | 47.619 | 0.00 | 0.00 | 0.00 | 2.01 |
2764 | 2832 | 1.073763 | ACCAGGACATGCTTGCTGTTA | 59.926 | 47.619 | 0.00 | 0.00 | 0.00 | 2.41 |
2765 | 2833 | 0.178981 | ACCAGGACATGCTTGCTGTT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2766 | 2834 | 0.892358 | CACCAGGACATGCTTGCTGT | 60.892 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2767 | 2835 | 0.607217 | TCACCAGGACATGCTTGCTG | 60.607 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2837 | 2905 | 2.472029 | GGAAGGGACCAGATCAAGAGA | 58.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
2840 | 2908 | 0.548510 | GGGGAAGGGACCAGATCAAG | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2863 | 2931 | 5.983540 | AGAGAACATCACCAGATTAGTTCC | 58.016 | 41.667 | 0.00 | 0.00 | 37.65 | 3.62 |
2864 | 2932 | 7.870445 | GGATAGAGAACATCACCAGATTAGTTC | 59.130 | 40.741 | 0.00 | 0.00 | 37.40 | 3.01 |
2865 | 2933 | 7.345653 | TGGATAGAGAACATCACCAGATTAGTT | 59.654 | 37.037 | 0.00 | 0.00 | 30.20 | 2.24 |
2866 | 2934 | 6.841229 | TGGATAGAGAACATCACCAGATTAGT | 59.159 | 38.462 | 0.00 | 0.00 | 30.20 | 2.24 |
2867 | 2935 | 7.015098 | ACTGGATAGAGAACATCACCAGATTAG | 59.985 | 40.741 | 15.59 | 0.00 | 42.90 | 1.73 |
2868 | 2936 | 6.841229 | ACTGGATAGAGAACATCACCAGATTA | 59.159 | 38.462 | 15.59 | 0.00 | 42.90 | 1.75 |
2869 | 2937 | 5.664908 | ACTGGATAGAGAACATCACCAGATT | 59.335 | 40.000 | 15.59 | 0.00 | 42.90 | 2.40 |
2870 | 2938 | 5.070180 | CACTGGATAGAGAACATCACCAGAT | 59.930 | 44.000 | 15.59 | 0.00 | 42.90 | 2.90 |
2871 | 2939 | 4.403752 | CACTGGATAGAGAACATCACCAGA | 59.596 | 45.833 | 15.59 | 0.00 | 42.90 | 3.86 |
2872 | 2940 | 4.403752 | TCACTGGATAGAGAACATCACCAG | 59.596 | 45.833 | 0.00 | 0.00 | 44.32 | 4.00 |
2873 | 2941 | 4.352893 | TCACTGGATAGAGAACATCACCA | 58.647 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
2874 | 2942 | 5.163364 | ACATCACTGGATAGAGAACATCACC | 60.163 | 44.000 | 0.00 | 0.00 | 30.87 | 4.02 |
2875 | 2943 | 5.911752 | ACATCACTGGATAGAGAACATCAC | 58.088 | 41.667 | 0.00 | 0.00 | 30.87 | 3.06 |
2876 | 2944 | 7.660030 | TTACATCACTGGATAGAGAACATCA | 57.340 | 36.000 | 0.00 | 0.00 | 30.87 | 3.07 |
2877 | 2945 | 7.601886 | CCATTACATCACTGGATAGAGAACATC | 59.398 | 40.741 | 0.00 | 0.00 | 31.38 | 3.06 |
2878 | 2946 | 7.071698 | ACCATTACATCACTGGATAGAGAACAT | 59.928 | 37.037 | 0.00 | 0.00 | 34.08 | 2.71 |
2879 | 2947 | 6.384015 | ACCATTACATCACTGGATAGAGAACA | 59.616 | 38.462 | 0.00 | 0.00 | 34.08 | 3.18 |
2880 | 2948 | 6.703607 | CACCATTACATCACTGGATAGAGAAC | 59.296 | 42.308 | 0.00 | 0.00 | 34.08 | 3.01 |
2881 | 2949 | 6.686378 | GCACCATTACATCACTGGATAGAGAA | 60.686 | 42.308 | 0.00 | 0.00 | 34.08 | 2.87 |
2882 | 2950 | 5.221521 | GCACCATTACATCACTGGATAGAGA | 60.222 | 44.000 | 0.00 | 0.00 | 34.08 | 3.10 |
2883 | 2951 | 4.993584 | GCACCATTACATCACTGGATAGAG | 59.006 | 45.833 | 0.00 | 0.00 | 34.08 | 2.43 |
2884 | 2952 | 4.655649 | AGCACCATTACATCACTGGATAGA | 59.344 | 41.667 | 0.00 | 0.00 | 34.08 | 1.98 |
2885 | 2953 | 4.965814 | AGCACCATTACATCACTGGATAG | 58.034 | 43.478 | 0.00 | 0.00 | 34.08 | 2.08 |
2886 | 2954 | 5.838521 | TCTAGCACCATTACATCACTGGATA | 59.161 | 40.000 | 0.00 | 0.00 | 34.08 | 2.59 |
2887 | 2955 | 3.939740 | AGCACCATTACATCACTGGAT | 57.060 | 42.857 | 0.00 | 0.00 | 34.08 | 3.41 |
2888 | 2956 | 4.030216 | TCTAGCACCATTACATCACTGGA | 58.970 | 43.478 | 0.00 | 0.00 | 34.08 | 3.86 |
2889 | 2957 | 4.406648 | TCTAGCACCATTACATCACTGG | 57.593 | 45.455 | 0.00 | 0.00 | 36.09 | 4.00 |
2890 | 2958 | 5.423015 | AGTTCTAGCACCATTACATCACTG | 58.577 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
2891 | 2959 | 5.683876 | AGTTCTAGCACCATTACATCACT | 57.316 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
2892 | 2960 | 7.210174 | TGATAGTTCTAGCACCATTACATCAC | 58.790 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
2893 | 2961 | 7.360113 | TGATAGTTCTAGCACCATTACATCA | 57.640 | 36.000 | 0.00 | 0.00 | 0.00 | 3.07 |
2894 | 2962 | 8.839310 | AATGATAGTTCTAGCACCATTACATC | 57.161 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
2895 | 2963 | 9.060347 | CAAATGATAGTTCTAGCACCATTACAT | 57.940 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
2896 | 2964 | 7.012327 | GCAAATGATAGTTCTAGCACCATTACA | 59.988 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
2897 | 2965 | 7.012327 | TGCAAATGATAGTTCTAGCACCATTAC | 59.988 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
2898 | 2966 | 7.012327 | GTGCAAATGATAGTTCTAGCACCATTA | 59.988 | 37.037 | 0.00 | 0.00 | 43.72 | 1.90 |
2899 | 2967 | 5.887598 | TGCAAATGATAGTTCTAGCACCATT | 59.112 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2900 | 2968 | 5.297776 | GTGCAAATGATAGTTCTAGCACCAT | 59.702 | 40.000 | 0.00 | 0.00 | 43.72 | 3.55 |
2901 | 2969 | 4.635765 | GTGCAAATGATAGTTCTAGCACCA | 59.364 | 41.667 | 0.00 | 0.00 | 43.72 | 4.17 |
2902 | 2970 | 5.162000 | GTGCAAATGATAGTTCTAGCACC | 57.838 | 43.478 | 0.00 | 0.00 | 43.72 | 5.01 |
2904 | 2972 | 6.430925 | ACAAAGTGCAAATGATAGTTCTAGCA | 59.569 | 34.615 | 0.35 | 0.35 | 0.00 | 3.49 |
2905 | 2973 | 6.846350 | ACAAAGTGCAAATGATAGTTCTAGC | 58.154 | 36.000 | 0.00 | 0.00 | 0.00 | 3.42 |
2906 | 2974 | 8.506437 | TCAACAAAGTGCAAATGATAGTTCTAG | 58.494 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
2907 | 2975 | 8.389779 | TCAACAAAGTGCAAATGATAGTTCTA | 57.610 | 30.769 | 0.00 | 0.00 | 0.00 | 2.10 |
2908 | 2976 | 7.275888 | TCAACAAAGTGCAAATGATAGTTCT | 57.724 | 32.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2909 | 2977 | 6.088616 | GCTCAACAAAGTGCAAATGATAGTTC | 59.911 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
2910 | 2978 | 5.922544 | GCTCAACAAAGTGCAAATGATAGTT | 59.077 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2911 | 2979 | 5.009911 | TGCTCAACAAAGTGCAAATGATAGT | 59.990 | 36.000 | 0.00 | 0.00 | 35.35 | 2.12 |
2912 | 2980 | 5.463286 | TGCTCAACAAAGTGCAAATGATAG | 58.537 | 37.500 | 0.00 | 0.00 | 35.35 | 2.08 |
2913 | 2981 | 5.450592 | TGCTCAACAAAGTGCAAATGATA | 57.549 | 34.783 | 0.00 | 0.00 | 35.35 | 2.15 |
2914 | 2982 | 4.325028 | TGCTCAACAAAGTGCAAATGAT | 57.675 | 36.364 | 0.00 | 0.00 | 35.35 | 2.45 |
2915 | 2983 | 3.797451 | TGCTCAACAAAGTGCAAATGA | 57.203 | 38.095 | 0.00 | 0.00 | 35.35 | 2.57 |
2916 | 2984 | 3.185594 | CCATGCTCAACAAAGTGCAAATG | 59.814 | 43.478 | 0.00 | 0.00 | 40.80 | 2.32 |
2917 | 2985 | 3.181463 | ACCATGCTCAACAAAGTGCAAAT | 60.181 | 39.130 | 0.00 | 0.00 | 40.80 | 2.32 |
2918 | 2986 | 2.168106 | ACCATGCTCAACAAAGTGCAAA | 59.832 | 40.909 | 0.00 | 0.00 | 40.80 | 3.68 |
2919 | 2987 | 1.755959 | ACCATGCTCAACAAAGTGCAA | 59.244 | 42.857 | 0.00 | 0.00 | 40.80 | 4.08 |
2920 | 2988 | 1.067364 | CACCATGCTCAACAAAGTGCA | 59.933 | 47.619 | 0.00 | 0.00 | 41.54 | 4.57 |
2921 | 2989 | 1.337703 | TCACCATGCTCAACAAAGTGC | 59.662 | 47.619 | 0.00 | 0.00 | 36.05 | 4.40 |
2922 | 2990 | 3.713858 | TTCACCATGCTCAACAAAGTG | 57.286 | 42.857 | 0.00 | 0.00 | 36.94 | 3.16 |
2923 | 2991 | 3.446873 | TGTTTCACCATGCTCAACAAAGT | 59.553 | 39.130 | 0.00 | 0.00 | 0.00 | 2.66 |
2924 | 2992 | 4.044336 | TGTTTCACCATGCTCAACAAAG | 57.956 | 40.909 | 0.00 | 0.00 | 0.00 | 2.77 |
2925 | 2993 | 4.669206 | ATGTTTCACCATGCTCAACAAA | 57.331 | 36.364 | 0.00 | 0.00 | 31.39 | 2.83 |
2926 | 2994 | 4.669206 | AATGTTTCACCATGCTCAACAA | 57.331 | 36.364 | 0.00 | 0.00 | 31.39 | 2.83 |
2927 | 2995 | 4.669206 | AAATGTTTCACCATGCTCAACA | 57.331 | 36.364 | 0.00 | 0.00 | 0.00 | 3.33 |
2928 | 2996 | 4.448732 | GGAAAATGTTTCACCATGCTCAAC | 59.551 | 41.667 | 3.35 | 0.00 | 0.00 | 3.18 |
2929 | 2997 | 4.344679 | AGGAAAATGTTTCACCATGCTCAA | 59.655 | 37.500 | 3.35 | 0.00 | 0.00 | 3.02 |
2930 | 2998 | 3.896888 | AGGAAAATGTTTCACCATGCTCA | 59.103 | 39.130 | 3.35 | 0.00 | 0.00 | 4.26 |
2931 | 2999 | 4.525912 | AGGAAAATGTTTCACCATGCTC | 57.474 | 40.909 | 3.35 | 0.00 | 0.00 | 4.26 |
2932 | 3000 | 4.961438 | AAGGAAAATGTTTCACCATGCT | 57.039 | 36.364 | 3.35 | 0.00 | 0.00 | 3.79 |
2933 | 3001 | 5.049474 | GGAAAAGGAAAATGTTTCACCATGC | 60.049 | 40.000 | 3.35 | 0.00 | 33.76 | 4.06 |
2934 | 3002 | 6.290605 | AGGAAAAGGAAAATGTTTCACCATG | 58.709 | 36.000 | 3.35 | 0.00 | 33.76 | 3.66 |
2935 | 3003 | 6.327365 | AGAGGAAAAGGAAAATGTTTCACCAT | 59.673 | 34.615 | 3.35 | 0.00 | 33.76 | 3.55 |
2936 | 3004 | 5.660864 | AGAGGAAAAGGAAAATGTTTCACCA | 59.339 | 36.000 | 3.35 | 0.00 | 33.76 | 4.17 |
2937 | 3005 | 6.161855 | AGAGGAAAAGGAAAATGTTTCACC | 57.838 | 37.500 | 3.35 | 0.00 | 33.76 | 4.02 |
2938 | 3006 | 7.264947 | TCAAGAGGAAAAGGAAAATGTTTCAC | 58.735 | 34.615 | 3.35 | 0.00 | 33.76 | 3.18 |
2939 | 3007 | 7.416964 | TCAAGAGGAAAAGGAAAATGTTTCA | 57.583 | 32.000 | 3.35 | 0.00 | 33.76 | 2.69 |
2940 | 3008 | 8.363390 | AGATCAAGAGGAAAAGGAAAATGTTTC | 58.637 | 33.333 | 0.00 | 0.00 | 0.00 | 2.78 |
2941 | 3009 | 8.146412 | CAGATCAAGAGGAAAAGGAAAATGTTT | 58.854 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
2942 | 3010 | 7.256083 | CCAGATCAAGAGGAAAAGGAAAATGTT | 60.256 | 37.037 | 0.00 | 0.00 | 0.00 | 2.71 |
2943 | 3011 | 6.210185 | CCAGATCAAGAGGAAAAGGAAAATGT | 59.790 | 38.462 | 0.00 | 0.00 | 0.00 | 2.71 |
2944 | 3012 | 6.210185 | ACCAGATCAAGAGGAAAAGGAAAATG | 59.790 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
2945 | 3013 | 6.318112 | ACCAGATCAAGAGGAAAAGGAAAAT | 58.682 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2946 | 3014 | 5.705400 | ACCAGATCAAGAGGAAAAGGAAAA | 58.295 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
2947 | 3015 | 5.316987 | GACCAGATCAAGAGGAAAAGGAAA | 58.683 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
2948 | 3016 | 4.263506 | GGACCAGATCAAGAGGAAAAGGAA | 60.264 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
2949 | 3017 | 3.264450 | GGACCAGATCAAGAGGAAAAGGA | 59.736 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
2950 | 3018 | 3.615155 | GGACCAGATCAAGAGGAAAAGG | 58.385 | 50.000 | 0.00 | 0.00 | 0.00 | 3.11 |
2951 | 3019 | 3.265479 | AGGGACCAGATCAAGAGGAAAAG | 59.735 | 47.826 | 0.00 | 0.00 | 0.00 | 2.27 |
2952 | 3020 | 3.260205 | AGGGACCAGATCAAGAGGAAAA | 58.740 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
2953 | 3021 | 2.921221 | AGGGACCAGATCAAGAGGAAA | 58.079 | 47.619 | 0.00 | 0.00 | 0.00 | 3.13 |
2954 | 3022 | 2.649742 | AGGGACCAGATCAAGAGGAA | 57.350 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2955 | 3023 | 2.472029 | GAAGGGACCAGATCAAGAGGA | 58.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
2956 | 3024 | 1.488393 | GGAAGGGACCAGATCAAGAGG | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 3.69 |
2957 | 3025 | 1.488393 | GGGAAGGGACCAGATCAAGAG | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 2.85 |
2958 | 3026 | 1.584724 | GGGAAGGGACCAGATCAAGA | 58.415 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2959 | 3027 | 0.548510 | GGGGAAGGGACCAGATCAAG | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2960 | 3028 | 1.271840 | CGGGGAAGGGACCAGATCAA | 61.272 | 60.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2961 | 3029 | 1.689233 | CGGGGAAGGGACCAGATCA | 60.689 | 63.158 | 0.00 | 0.00 | 0.00 | 2.92 |
2962 | 3030 | 2.444256 | CCGGGGAAGGGACCAGATC | 61.444 | 68.421 | 0.00 | 0.00 | 0.00 | 2.75 |
2963 | 3031 | 2.366972 | CCGGGGAAGGGACCAGAT | 60.367 | 66.667 | 0.00 | 0.00 | 0.00 | 2.90 |
2964 | 3032 | 3.607299 | TCCGGGGAAGGGACCAGA | 61.607 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
2965 | 3033 | 3.083997 | CTCCGGGGAAGGGACCAG | 61.084 | 72.222 | 0.00 | 0.00 | 0.00 | 4.00 |
2966 | 3034 | 4.733725 | CCTCCGGGGAAGGGACCA | 62.734 | 72.222 | 0.37 | 0.00 | 37.23 | 4.02 |
2967 | 3035 | 4.410033 | TCCTCCGGGGAAGGGACC | 62.410 | 72.222 | 0.37 | 0.00 | 41.91 | 4.46 |
2974 | 3042 | 1.562475 | CCAAATTAGTTCCTCCGGGGA | 59.438 | 52.381 | 0.37 | 4.95 | 43.41 | 4.81 |
2975 | 3043 | 1.283905 | ACCAAATTAGTTCCTCCGGGG | 59.716 | 52.381 | 0.00 | 0.00 | 0.00 | 5.73 |
2976 | 3044 | 2.026636 | TCACCAAATTAGTTCCTCCGGG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 5.73 |
2977 | 3045 | 3.343941 | TCACCAAATTAGTTCCTCCGG | 57.656 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
2978 | 3046 | 4.261801 | ACATCACCAAATTAGTTCCTCCG | 58.738 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
2984 | 3052 | 8.328758 | TGGATAGAGAACATCACCAAATTAGTT | 58.671 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
3057 | 3125 | 7.264947 | TCAAGAGGAAAAGGAAAATGTTTCAC | 58.735 | 34.615 | 3.35 | 0.00 | 33.76 | 3.18 |
3058 | 3126 | 7.416964 | TCAAGAGGAAAAGGAAAATGTTTCA | 57.583 | 32.000 | 3.35 | 0.00 | 33.76 | 2.69 |
3059 | 3127 | 8.363390 | AGATCAAGAGGAAAAGGAAAATGTTTC | 58.637 | 33.333 | 0.00 | 0.00 | 0.00 | 2.78 |
3060 | 3128 | 8.146412 | CAGATCAAGAGGAAAAGGAAAATGTTT | 58.854 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
3061 | 3129 | 7.256083 | CCAGATCAAGAGGAAAAGGAAAATGTT | 60.256 | 37.037 | 0.00 | 0.00 | 0.00 | 2.71 |
3062 | 3130 | 6.210185 | CCAGATCAAGAGGAAAAGGAAAATGT | 59.790 | 38.462 | 0.00 | 0.00 | 0.00 | 2.71 |
3063 | 3131 | 6.210185 | ACCAGATCAAGAGGAAAAGGAAAATG | 59.790 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
3064 | 3132 | 6.318112 | ACCAGATCAAGAGGAAAAGGAAAAT | 58.682 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3065 | 3133 | 5.705400 | ACCAGATCAAGAGGAAAAGGAAAA | 58.295 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
3066 | 3134 | 5.316987 | GACCAGATCAAGAGGAAAAGGAAA | 58.683 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
3067 | 3135 | 4.263506 | GGACCAGATCAAGAGGAAAAGGAA | 60.264 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
3068 | 3136 | 3.264450 | GGACCAGATCAAGAGGAAAAGGA | 59.736 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
3069 | 3137 | 3.615155 | GGACCAGATCAAGAGGAAAAGG | 58.385 | 50.000 | 0.00 | 0.00 | 0.00 | 3.11 |
3070 | 3138 | 3.265479 | AGGGACCAGATCAAGAGGAAAAG | 59.735 | 47.826 | 0.00 | 0.00 | 0.00 | 2.27 |
3071 | 3139 | 3.260205 | AGGGACCAGATCAAGAGGAAAA | 58.740 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
3072 | 3140 | 2.921221 | AGGGACCAGATCAAGAGGAAA | 58.079 | 47.619 | 0.00 | 0.00 | 0.00 | 3.13 |
3073 | 3141 | 2.649742 | AGGGACCAGATCAAGAGGAA | 57.350 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
3074 | 3142 | 2.472029 | GAAGGGACCAGATCAAGAGGA | 58.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
3075 | 3143 | 1.488393 | GGAAGGGACCAGATCAAGAGG | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 3.69 |
3076 | 3144 | 1.488393 | GGGAAGGGACCAGATCAAGAG | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 2.85 |
3077 | 3145 | 1.584724 | GGGAAGGGACCAGATCAAGA | 58.415 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3078 | 3146 | 0.548510 | GGGGAAGGGACCAGATCAAG | 59.451 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3079 | 3147 | 1.271840 | CGGGGAAGGGACCAGATCAA | 61.272 | 60.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3080 | 3148 | 1.689233 | CGGGGAAGGGACCAGATCA | 60.689 | 63.158 | 0.00 | 0.00 | 0.00 | 2.92 |
3081 | 3149 | 2.444256 | CCGGGGAAGGGACCAGATC | 61.444 | 68.421 | 0.00 | 0.00 | 0.00 | 2.75 |
3082 | 3150 | 2.366972 | CCGGGGAAGGGACCAGAT | 60.367 | 66.667 | 0.00 | 0.00 | 0.00 | 2.90 |
3083 | 3151 | 3.607299 | TCCGGGGAAGGGACCAGA | 61.607 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
3084 | 3152 | 3.083997 | CTCCGGGGAAGGGACCAG | 61.084 | 72.222 | 0.00 | 0.00 | 0.00 | 4.00 |
3085 | 3153 | 4.733725 | CCTCCGGGGAAGGGACCA | 62.734 | 72.222 | 0.37 | 0.00 | 37.23 | 4.02 |
3086 | 3154 | 4.410033 | TCCTCCGGGGAAGGGACC | 62.410 | 72.222 | 0.37 | 0.00 | 41.91 | 4.46 |
3093 | 3161 | 1.562475 | CCAAATTAGTTCCTCCGGGGA | 59.438 | 52.381 | 0.37 | 4.95 | 43.41 | 4.81 |
3094 | 3162 | 1.283905 | ACCAAATTAGTTCCTCCGGGG | 59.716 | 52.381 | 0.00 | 0.00 | 0.00 | 5.73 |
3095 | 3163 | 2.026636 | TGACCAAATTAGTTCCTCCGGG | 60.027 | 50.000 | 0.00 | 0.00 | 0.00 | 5.73 |
3096 | 3164 | 3.343941 | TGACCAAATTAGTTCCTCCGG | 57.656 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
3097 | 3165 | 4.261801 | ACATGACCAAATTAGTTCCTCCG | 58.738 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
3098 | 3166 | 5.946377 | AGAACATGACCAAATTAGTTCCTCC | 59.054 | 40.000 | 0.00 | 0.00 | 36.84 | 4.30 |
3099 | 3167 | 6.881602 | AGAGAACATGACCAAATTAGTTCCTC | 59.118 | 38.462 | 0.00 | 0.00 | 36.84 | 3.71 |
3100 | 3168 | 6.784031 | AGAGAACATGACCAAATTAGTTCCT | 58.216 | 36.000 | 0.00 | 0.00 | 36.84 | 3.36 |
3101 | 3169 | 8.738645 | ATAGAGAACATGACCAAATTAGTTCC | 57.261 | 34.615 | 0.00 | 0.00 | 36.84 | 3.62 |
3102 | 3170 | 8.831550 | GGATAGAGAACATGACCAAATTAGTTC | 58.168 | 37.037 | 0.00 | 0.00 | 36.52 | 3.01 |
3103 | 3171 | 8.328758 | TGGATAGAGAACATGACCAAATTAGTT | 58.671 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
3104 | 3172 | 7.861629 | TGGATAGAGAACATGACCAAATTAGT | 58.138 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
3105 | 3173 | 7.989741 | ACTGGATAGAGAACATGACCAAATTAG | 59.010 | 37.037 | 0.00 | 0.00 | 0.00 | 1.73 |
3106 | 3174 | 7.770433 | CACTGGATAGAGAACATGACCAAATTA | 59.230 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
3107 | 3175 | 6.600822 | CACTGGATAGAGAACATGACCAAATT | 59.399 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
3108 | 3176 | 6.070021 | TCACTGGATAGAGAACATGACCAAAT | 60.070 | 38.462 | 0.00 | 0.00 | 0.00 | 2.32 |
3109 | 3177 | 5.248248 | TCACTGGATAGAGAACATGACCAAA | 59.752 | 40.000 | 0.00 | 0.00 | 0.00 | 3.28 |
3110 | 3178 | 4.777366 | TCACTGGATAGAGAACATGACCAA | 59.223 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
3111 | 3179 | 4.352893 | TCACTGGATAGAGAACATGACCA | 58.647 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
3112 | 3180 | 5.163364 | ACATCACTGGATAGAGAACATGACC | 60.163 | 44.000 | 0.00 | 0.00 | 30.87 | 4.02 |
3113 | 3181 | 5.911752 | ACATCACTGGATAGAGAACATGAC | 58.088 | 41.667 | 0.00 | 0.00 | 30.87 | 3.06 |
3114 | 3182 | 7.660030 | TTACATCACTGGATAGAGAACATGA | 57.340 | 36.000 | 0.00 | 0.00 | 30.87 | 3.07 |
3115 | 3183 | 7.387122 | CCATTACATCACTGGATAGAGAACATG | 59.613 | 40.741 | 0.00 | 0.00 | 31.38 | 3.21 |
3116 | 3184 | 7.071698 | ACCATTACATCACTGGATAGAGAACAT | 59.928 | 37.037 | 0.00 | 0.00 | 34.08 | 2.71 |
3117 | 3185 | 6.384015 | ACCATTACATCACTGGATAGAGAACA | 59.616 | 38.462 | 0.00 | 0.00 | 34.08 | 3.18 |
3118 | 3186 | 6.703607 | CACCATTACATCACTGGATAGAGAAC | 59.296 | 42.308 | 0.00 | 0.00 | 34.08 | 3.01 |
3119 | 3187 | 6.686378 | GCACCATTACATCACTGGATAGAGAA | 60.686 | 42.308 | 0.00 | 0.00 | 34.08 | 2.87 |
3120 | 3188 | 5.221521 | GCACCATTACATCACTGGATAGAGA | 60.222 | 44.000 | 0.00 | 0.00 | 34.08 | 3.10 |
3121 | 3189 | 4.993584 | GCACCATTACATCACTGGATAGAG | 59.006 | 45.833 | 0.00 | 0.00 | 34.08 | 2.43 |
3122 | 3190 | 4.655649 | AGCACCATTACATCACTGGATAGA | 59.344 | 41.667 | 0.00 | 0.00 | 34.08 | 1.98 |
3123 | 3191 | 4.965814 | AGCACCATTACATCACTGGATAG | 58.034 | 43.478 | 0.00 | 0.00 | 34.08 | 2.08 |
3124 | 3192 | 5.838521 | TCTAGCACCATTACATCACTGGATA | 59.161 | 40.000 | 0.00 | 0.00 | 34.08 | 2.59 |
3125 | 3193 | 3.939740 | AGCACCATTACATCACTGGAT | 57.060 | 42.857 | 0.00 | 0.00 | 34.08 | 3.41 |
3126 | 3194 | 4.030216 | TCTAGCACCATTACATCACTGGA | 58.970 | 43.478 | 0.00 | 0.00 | 34.08 | 3.86 |
3127 | 3195 | 4.122776 | GTCTAGCACCATTACATCACTGG | 58.877 | 47.826 | 0.00 | 0.00 | 36.09 | 4.00 |
3128 | 3196 | 4.758688 | TGTCTAGCACCATTACATCACTG | 58.241 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
3129 | 3197 | 5.620738 | ATGTCTAGCACCATTACATCACT | 57.379 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3130 | 3198 | 6.489675 | CAAATGTCTAGCACCATTACATCAC | 58.510 | 40.000 | 0.00 | 0.00 | 31.30 | 3.06 |
3131 | 3199 | 5.066375 | GCAAATGTCTAGCACCATTACATCA | 59.934 | 40.000 | 0.00 | 0.00 | 31.30 | 3.07 |
3132 | 3200 | 5.066375 | TGCAAATGTCTAGCACCATTACATC | 59.934 | 40.000 | 0.00 | 0.00 | 32.55 | 3.06 |
3133 | 3201 | 4.949238 | TGCAAATGTCTAGCACCATTACAT | 59.051 | 37.500 | 0.00 | 0.00 | 32.55 | 2.29 |
3134 | 3202 | 4.331108 | TGCAAATGTCTAGCACCATTACA | 58.669 | 39.130 | 0.00 | 0.00 | 32.55 | 2.41 |
3135 | 3203 | 4.963276 | TGCAAATGTCTAGCACCATTAC | 57.037 | 40.909 | 0.00 | 1.55 | 32.55 | 1.89 |
3142 | 3210 | 3.287312 | GCAAAGTGCAAATGTCTAGCA | 57.713 | 42.857 | 0.00 | 0.00 | 44.26 | 3.49 |
3154 | 3222 | 1.016627 | TATCATGCTCGGCAAAGTGC | 58.983 | 50.000 | 2.68 | 0.00 | 43.62 | 4.40 |
3155 | 3223 | 3.763097 | TTTATCATGCTCGGCAAAGTG | 57.237 | 42.857 | 2.68 | 0.00 | 43.62 | 3.16 |
3156 | 3224 | 3.696051 | ACATTTATCATGCTCGGCAAAGT | 59.304 | 39.130 | 2.68 | 0.00 | 43.62 | 2.66 |
3157 | 3225 | 4.297299 | ACATTTATCATGCTCGGCAAAG | 57.703 | 40.909 | 2.68 | 0.12 | 43.62 | 2.77 |
3158 | 3226 | 4.717233 | AACATTTATCATGCTCGGCAAA | 57.283 | 36.364 | 2.68 | 0.00 | 43.62 | 3.68 |
3159 | 3227 | 4.717233 | AAACATTTATCATGCTCGGCAA | 57.283 | 36.364 | 2.68 | 0.00 | 43.62 | 4.52 |
3160 | 3228 | 4.717233 | AAAACATTTATCATGCTCGGCA | 57.283 | 36.364 | 1.01 | 1.01 | 44.86 | 5.69 |
3343 | 3424 | 7.878477 | ACATCAAAACATTTGTATTGCTCAG | 57.122 | 32.000 | 3.06 | 0.00 | 0.00 | 3.35 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.