Multiple sequence alignment - TraesCS2B01G539200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G539200 chr2B 100.000 3689 0 0 1 3689 734396106 734399794 0.000000e+00 6813
1 TraesCS2B01G539200 chr6B 85.458 3060 422 22 13 3062 64689549 64686503 0.000000e+00 3164
2 TraesCS2B01G539200 chr6B 82.630 3080 487 40 5 3064 2716490 2719541 0.000000e+00 2680
3 TraesCS2B01G539200 chr4B 84.874 3061 416 31 13 3061 650656060 650659085 0.000000e+00 3044
4 TraesCS2B01G539200 chr4B 87.037 108 10 3 3573 3676 650659808 650659915 6.470000e-23 119
5 TraesCS2B01G539200 chr4A 84.473 3072 450 24 5 3064 657201107 657204163 0.000000e+00 3005
6 TraesCS2B01G539200 chr3D 84.281 3079 444 34 1 3060 26586926 26583869 0.000000e+00 2968
7 TraesCS2B01G539200 chr3A 84.113 3078 451 30 1 3060 36662455 36659398 0.000000e+00 2940
8 TraesCS2B01G539200 chr7B 83.827 3073 469 21 1 3060 624709769 624706712 0.000000e+00 2896
9 TraesCS2B01G539200 chr3B 83.772 3075 469 26 1 3060 44787377 44784318 0.000000e+00 2887
10 TraesCS2B01G539200 chr3B 82.743 3048 473 41 43 3064 814449831 814446811 0.000000e+00 2665
11 TraesCS2B01G539200 chr7D 83.610 3075 472 26 1 3060 568631702 568628645 0.000000e+00 2857
12 TraesCS2B01G539200 chr7A 83.512 3075 475 23 1 3060 657420283 657417226 0.000000e+00 2841
13 TraesCS2B01G539200 chr7A 82.943 3078 491 29 5 3064 625913017 625909956 0.000000e+00 2745
14 TraesCS2B01G539200 chr1B 78.935 432 86 3 5 435 2916191 2916618 4.660000e-74 289
15 TraesCS2B01G539200 chr5A 84.496 129 14 4 3564 3686 688718164 688718292 5.000000e-24 122


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G539200 chr2B 734396106 734399794 3688 False 6813.0 6813 100.0000 1 3689 1 chr2B.!!$F1 3688
1 TraesCS2B01G539200 chr6B 64686503 64689549 3046 True 3164.0 3164 85.4580 13 3062 1 chr6B.!!$R1 3049
2 TraesCS2B01G539200 chr6B 2716490 2719541 3051 False 2680.0 2680 82.6300 5 3064 1 chr6B.!!$F1 3059
3 TraesCS2B01G539200 chr4B 650656060 650659915 3855 False 1581.5 3044 85.9555 13 3676 2 chr4B.!!$F1 3663
4 TraesCS2B01G539200 chr4A 657201107 657204163 3056 False 3005.0 3005 84.4730 5 3064 1 chr4A.!!$F1 3059
5 TraesCS2B01G539200 chr3D 26583869 26586926 3057 True 2968.0 2968 84.2810 1 3060 1 chr3D.!!$R1 3059
6 TraesCS2B01G539200 chr3A 36659398 36662455 3057 True 2940.0 2940 84.1130 1 3060 1 chr3A.!!$R1 3059
7 TraesCS2B01G539200 chr7B 624706712 624709769 3057 True 2896.0 2896 83.8270 1 3060 1 chr7B.!!$R1 3059
8 TraesCS2B01G539200 chr3B 44784318 44787377 3059 True 2887.0 2887 83.7720 1 3060 1 chr3B.!!$R1 3059
9 TraesCS2B01G539200 chr3B 814446811 814449831 3020 True 2665.0 2665 82.7430 43 3064 1 chr3B.!!$R2 3021
10 TraesCS2B01G539200 chr7D 568628645 568631702 3057 True 2857.0 2857 83.6100 1 3060 1 chr7D.!!$R1 3059
11 TraesCS2B01G539200 chr7A 657417226 657420283 3057 True 2841.0 2841 83.5120 1 3060 1 chr7A.!!$R2 3059
12 TraesCS2B01G539200 chr7A 625909956 625913017 3061 True 2745.0 2745 82.9430 5 3064 1 chr7A.!!$R1 3059

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
304 305 0.389166 GAACCTGAGCTCCTGTGTCG 60.389 60.0 12.15 0.0 0.00 4.35 F
519 520 0.536687 CACCAGGGATAGGCAGCATG 60.537 60.0 0.00 0.0 40.87 4.06 F
626 634 0.588252 CTTTGGATCGGGCGCAATAG 59.412 55.0 10.83 0.0 0.00 1.73 F
810 818 0.902531 CTCCCACTTTCGGAAGGCTA 59.097 55.0 8.66 0.0 37.19 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 1738 0.455633 CTCGCCTTGCAGATTGTTGC 60.456 55.000 0.00 0.0 44.33 4.17 R
2208 2222 0.615331 TCCTTCTCATGGCCTCACAC 59.385 55.000 3.32 0.0 0.00 3.82 R
2535 2549 3.407424 TGAAGGATCCTTGATATGCCG 57.593 47.619 31.79 0.0 36.26 5.69 R
2801 2825 1.066858 TCTCTGAATGTGCCTTCCGTC 60.067 52.381 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.675310 CGCTGGCATCCTGGAACAA 60.675 57.895 0.00 0.00 38.70 2.83
143 144 2.519541 CGGATCGCTCTCCCCAGA 60.520 66.667 0.00 0.00 31.04 3.86
191 192 2.260844 CTCAACCTGAGCTTCAACCA 57.739 50.000 0.00 0.00 37.72 3.67
300 301 2.164865 CTGCGAACCTGAGCTCCTGT 62.165 60.000 12.15 5.25 0.00 4.00
304 305 0.389166 GAACCTGAGCTCCTGTGTCG 60.389 60.000 12.15 0.00 0.00 4.35
312 313 0.955428 GCTCCTGTGTCGGCATGAAA 60.955 55.000 0.00 0.00 0.00 2.69
320 321 4.013050 TGTGTCGGCATGAAAATAATGGA 58.987 39.130 0.00 0.00 0.00 3.41
324 325 5.184864 TGTCGGCATGAAAATAATGGAACTT 59.815 36.000 0.00 0.00 0.00 2.66
327 328 6.096705 TCGGCATGAAAATAATGGAACTTCAT 59.903 34.615 0.00 0.00 0.00 2.57
328 329 6.418819 CGGCATGAAAATAATGGAACTTCATC 59.581 38.462 0.00 0.00 0.00 2.92
340 341 4.402155 TGGAACTTCATCACAACAAGCTTT 59.598 37.500 0.00 0.00 0.00 3.51
342 343 4.311816 ACTTCATCACAACAAGCTTTGG 57.688 40.909 0.00 0.00 34.12 3.28
372 373 2.325082 GCCTGAGCTCGGCGAAAAA 61.325 57.895 26.15 0.38 37.87 1.94
399 400 4.326009 GTCTTCTTGACTGAAATCTCGCTC 59.674 45.833 0.00 0.00 42.21 5.03
403 404 1.205655 TGACTGAAATCTCGCTCAGGG 59.794 52.381 4.27 0.00 42.83 4.45
519 520 0.536687 CACCAGGGATAGGCAGCATG 60.537 60.000 0.00 0.00 40.87 4.06
543 551 4.507021 CAGAGCATGCAGACATTACTACTG 59.493 45.833 21.98 7.35 32.87 2.74
548 556 4.188247 TGCAGACATTACTACTGTCCAC 57.812 45.455 3.53 0.00 43.24 4.02
556 564 6.116806 ACATTACTACTGTCCACAAACAACA 58.883 36.000 0.00 0.00 0.00 3.33
594 602 4.282195 CCACCTTCTCTCTACAACTTGTCT 59.718 45.833 0.00 0.00 0.00 3.41
611 619 5.762218 ACTTGTCTTCACTGGAATCTCTTTG 59.238 40.000 0.00 0.00 31.34 2.77
626 634 0.588252 CTTTGGATCGGGCGCAATAG 59.412 55.000 10.83 0.00 0.00 1.73
627 635 1.444119 TTTGGATCGGGCGCAATAGC 61.444 55.000 10.83 0.00 37.42 2.97
658 666 3.341823 AGCATTCTGAATGATATCGGCC 58.658 45.455 29.34 12.04 41.46 6.13
666 674 1.967319 ATGATATCGGCCGCAAGTTT 58.033 45.000 23.51 0.81 0.00 2.66
717 725 8.109634 AGTTATAATCACTTCACAGGAACCATT 58.890 33.333 0.00 0.00 0.00 3.16
765 773 5.398236 TCCCTCATAGATCTTTTCCTCGAT 58.602 41.667 0.00 0.00 0.00 3.59
771 779 9.405587 CTCATAGATCTTTTCCTCGATAAGAAC 57.594 37.037 0.00 0.00 34.45 3.01
798 806 1.229820 TGGGTATGTGCCTCCCACT 60.230 57.895 0.00 0.00 45.19 4.00
801 809 1.682087 GGGTATGTGCCTCCCACTTTC 60.682 57.143 0.00 0.00 44.92 2.62
804 812 1.488705 ATGTGCCTCCCACTTTCGGA 61.489 55.000 0.00 0.00 44.92 4.55
810 818 0.902531 CTCCCACTTTCGGAAGGCTA 59.097 55.000 8.66 0.00 37.19 3.93
862 870 4.328169 GCAATAAGCTTGAAGCAAATGACC 59.672 41.667 20.45 0.00 45.56 4.02
919 927 2.093973 TGTAGCCAGCTAGAGAAACTGC 60.094 50.000 0.00 0.00 0.00 4.40
927 935 2.352814 GCTAGAGAAACTGCAACTCGGA 60.353 50.000 0.00 0.00 36.03 4.55
930 938 1.000955 GAGAAACTGCAACTCGGAGGA 59.999 52.381 10.23 0.00 37.39 3.71
931 939 1.001406 AGAAACTGCAACTCGGAGGAG 59.999 52.381 10.23 2.33 46.13 3.69
946 954 1.633774 AGGAGACTCTTTCGCAGGAA 58.366 50.000 1.74 0.00 32.90 3.36
975 983 3.099905 TGGATCGATTGTGAACCTCTCT 58.900 45.455 0.00 0.00 32.39 3.10
977 985 4.339530 TGGATCGATTGTGAACCTCTCTAG 59.660 45.833 0.00 0.00 32.39 2.43
978 986 4.339814 GGATCGATTGTGAACCTCTCTAGT 59.660 45.833 0.00 0.00 0.00 2.57
1056 1064 1.698506 TCGGCAATTTGGTTGGTCTT 58.301 45.000 0.00 0.00 38.29 3.01
1113 1121 2.306805 AGTGATTCCAGACAGCATTGGA 59.693 45.455 0.00 0.00 41.59 3.53
1121 1129 2.681848 CAGACAGCATTGGAAAGCTAGG 59.318 50.000 0.00 0.00 39.50 3.02
1123 1131 2.941720 GACAGCATTGGAAAGCTAGGAG 59.058 50.000 0.00 0.00 39.50 3.69
1130 1138 1.279271 TGGAAAGCTAGGAGACTTGGC 59.721 52.381 0.00 0.00 43.67 4.52
1206 1214 5.123979 AGGAAATCTTTCGCAGTTGAATACC 59.876 40.000 0.00 0.00 38.06 2.73
1302 1310 3.119955 TCGATCTGTCAACGAACTACAGG 60.120 47.826 0.00 0.00 40.79 4.00
1338 1346 9.709495 TCAATACCCAGAGAAATTTTGAAATTG 57.291 29.630 2.71 0.00 38.53 2.32
1341 1349 4.389687 CCCAGAGAAATTTTGAAATTGCCG 59.610 41.667 2.71 0.00 38.53 5.69
1429 1437 5.105351 GGTAGCTTGGCAAATCTTAACCAAT 60.105 40.000 0.00 0.00 41.17 3.16
1477 1485 3.692101 TGGCAAAATACCCGACAGTATTG 59.308 43.478 6.32 0.00 41.08 1.90
1496 1504 6.886459 AGTATTGAGAATTGCATAGTGTTGGT 59.114 34.615 0.00 0.00 0.00 3.67
1638 1646 4.792068 CCCTTGGCAGTATTGGAAATCTA 58.208 43.478 0.00 0.00 0.00 1.98
1693 1701 2.158813 GGATCAATCCCCGCAGTTCTAA 60.159 50.000 0.00 0.00 41.20 2.10
1708 1716 6.521133 CGCAGTTCTAAAGAATTTGACATCAC 59.479 38.462 9.88 0.00 39.63 3.06
1953 1967 5.119898 GCTGTCACTGTCAGTTATTCTTCTG 59.880 44.000 1.67 0.00 35.60 3.02
1979 1993 4.592942 TGGATACTTTGCAAGAAGCTCAT 58.407 39.130 0.00 0.00 40.70 2.90
1992 2006 3.201708 AGAAGCTCATACCAAGCCAGAAT 59.798 43.478 0.00 0.00 40.75 2.40
2002 2016 4.599041 ACCAAGCCAGAATACATTAGCAA 58.401 39.130 0.00 0.00 0.00 3.91
2124 2138 6.753107 AGTTATGGTGTGGTTTATAAGTGC 57.247 37.500 0.00 0.00 0.00 4.40
2175 2189 4.798574 CTGTCAAGGTGTTTAATCTTGGC 58.201 43.478 0.00 0.00 41.77 4.52
2178 2192 3.826157 TCAAGGTGTTTAATCTTGGCCAG 59.174 43.478 5.11 0.00 38.59 4.85
2208 2222 3.131709 TCCAAGAGTTTTGAGGCTGAG 57.868 47.619 0.00 0.00 0.00 3.35
2321 2335 3.808726 GCATTGGTTTTTGAGTTCATGCA 59.191 39.130 0.00 0.00 0.00 3.96
2366 2380 4.157289 GCTTCATCCAAAATCTCAAGAGCA 59.843 41.667 0.00 0.00 0.00 4.26
2367 2381 5.163540 GCTTCATCCAAAATCTCAAGAGCAT 60.164 40.000 0.00 0.00 0.00 3.79
2386 2400 4.503007 AGCATACTATAAACAACACGCTCG 59.497 41.667 0.00 0.00 0.00 5.03
2388 2402 3.308438 ACTATAAACAACACGCTCGGT 57.692 42.857 0.00 0.00 0.00 4.69
2462 2476 2.877786 TGCACAACTACTGTCAACCATG 59.122 45.455 0.00 0.00 35.47 3.66
2463 2477 2.878406 GCACAACTACTGTCAACCATGT 59.122 45.455 0.00 0.00 35.47 3.21
2535 2549 1.618640 GCGCACGAGTTGGAGACTTC 61.619 60.000 0.30 0.00 39.19 3.01
2638 2652 1.339055 GCTATGTTGCTCCAGGTGACA 60.339 52.381 0.00 0.00 0.00 3.58
2801 2825 0.323629 TGTTTACAGGAAGGAGCCCG 59.676 55.000 0.00 0.00 0.00 6.13
2804 2828 1.601419 TTACAGGAAGGAGCCCGACG 61.601 60.000 0.00 0.00 0.00 5.12
2891 2915 0.824109 TGGAGATAGCTGACCCAACG 59.176 55.000 0.00 0.00 0.00 4.10
2907 2931 1.230635 AACGATGTGGCTGCACAGAC 61.231 55.000 0.50 0.00 38.59 3.51
2924 2948 5.451908 CACAGACAACAACATGATAACACC 58.548 41.667 0.00 0.00 0.00 4.16
2960 2984 2.301346 CAGGAGTGCTTGGTTTCAGTT 58.699 47.619 0.00 0.00 0.00 3.16
3064 3088 4.397481 TCAGAGATGCATACCTCAAGTG 57.603 45.455 15.59 7.26 32.07 3.16
3066 3090 3.869832 CAGAGATGCATACCTCAAGTGTG 59.130 47.826 15.59 3.58 40.39 3.82
3067 3091 3.118482 AGAGATGCATACCTCAAGTGTGG 60.118 47.826 15.59 0.00 38.01 4.17
3068 3092 2.092753 AGATGCATACCTCAAGTGTGGG 60.093 50.000 0.00 0.00 38.01 4.61
3074 3098 2.452116 CCTCAAGTGTGGGGTCTCA 58.548 57.895 0.00 0.00 41.04 3.27
3075 3099 0.035458 CCTCAAGTGTGGGGTCTCAC 59.965 60.000 0.00 0.00 41.04 3.51
3076 3100 1.051812 CTCAAGTGTGGGGTCTCACT 58.948 55.000 2.48 0.00 46.05 3.41
3080 3104 1.349067 AGTGTGGGGTCTCACTTACC 58.651 55.000 2.48 0.00 42.87 2.85
3081 3105 1.053424 GTGTGGGGTCTCACTTACCA 58.947 55.000 2.48 0.00 38.87 3.25
3082 3106 1.002087 GTGTGGGGTCTCACTTACCAG 59.998 57.143 2.48 0.00 38.87 4.00
3083 3107 0.036294 GTGGGGTCTCACTTACCAGC 60.036 60.000 0.00 0.00 38.87 4.85
3084 3108 0.472925 TGGGGTCTCACTTACCAGCA 60.473 55.000 0.00 0.00 38.87 4.41
3085 3109 0.036294 GGGGTCTCACTTACCAGCAC 60.036 60.000 0.00 0.00 38.87 4.40
3086 3110 0.685097 GGGTCTCACTTACCAGCACA 59.315 55.000 0.00 0.00 38.87 4.57
3087 3111 1.338200 GGGTCTCACTTACCAGCACAG 60.338 57.143 0.00 0.00 38.87 3.66
3088 3112 1.338200 GGTCTCACTTACCAGCACAGG 60.338 57.143 0.00 0.00 36.96 4.00
3089 3113 1.618837 GTCTCACTTACCAGCACAGGA 59.381 52.381 0.00 0.00 0.00 3.86
3090 3114 1.895798 TCTCACTTACCAGCACAGGAG 59.104 52.381 0.00 0.00 0.00 3.69
3091 3115 0.976641 TCACTTACCAGCACAGGAGG 59.023 55.000 0.00 0.00 0.00 4.30
3092 3116 0.976641 CACTTACCAGCACAGGAGGA 59.023 55.000 0.00 0.00 0.00 3.71
3093 3117 1.066573 CACTTACCAGCACAGGAGGAG 60.067 57.143 0.00 0.00 0.00 3.69
3094 3118 1.203187 ACTTACCAGCACAGGAGGAGA 60.203 52.381 0.00 0.00 0.00 3.71
3095 3119 1.205893 CTTACCAGCACAGGAGGAGAC 59.794 57.143 0.00 0.00 0.00 3.36
3096 3120 0.614979 TACCAGCACAGGAGGAGACC 60.615 60.000 0.00 0.00 0.00 3.85
3097 3121 2.664081 CCAGCACAGGAGGAGACCC 61.664 68.421 0.00 0.00 0.00 4.46
3098 3122 1.915266 CAGCACAGGAGGAGACCCA 60.915 63.158 0.00 0.00 33.88 4.51
3099 3123 1.152030 AGCACAGGAGGAGACCCAA 60.152 57.895 0.00 0.00 33.88 4.12
3100 3124 1.197430 AGCACAGGAGGAGACCCAAG 61.197 60.000 0.00 0.00 33.88 3.61
3101 3125 1.986413 CACAGGAGGAGACCCAAGG 59.014 63.158 0.00 0.00 33.88 3.61
3102 3126 1.920835 ACAGGAGGAGACCCAAGGC 60.921 63.158 0.00 0.00 33.88 4.35
3103 3127 1.920325 CAGGAGGAGACCCAAGGCA 60.920 63.158 0.00 0.00 33.88 4.75
3104 3128 1.614824 AGGAGGAGACCCAAGGCAG 60.615 63.158 0.00 0.00 33.88 4.85
3105 3129 2.270527 GAGGAGACCCAAGGCAGC 59.729 66.667 0.00 0.00 33.88 5.25
3106 3130 2.204059 AGGAGACCCAAGGCAGCT 60.204 61.111 0.00 0.00 33.88 4.24
3107 3131 2.045536 GGAGACCCAAGGCAGCTG 60.046 66.667 10.11 10.11 0.00 4.24
3108 3132 2.749441 GAGACCCAAGGCAGCTGC 60.749 66.667 30.88 30.88 41.14 5.25
3109 3133 3.557903 GAGACCCAAGGCAGCTGCA 62.558 63.158 37.63 0.00 44.36 4.41
3110 3134 3.060615 GACCCAAGGCAGCTGCAG 61.061 66.667 37.63 25.83 44.36 4.41
3113 3137 3.749064 CCAAGGCAGCTGCAGCAG 61.749 66.667 38.24 31.89 45.16 4.24
3114 3138 3.749064 CAAGGCAGCTGCAGCAGG 61.749 66.667 38.24 29.50 45.16 4.85
3115 3139 3.962694 AAGGCAGCTGCAGCAGGA 61.963 61.111 38.24 0.00 45.16 3.86
3116 3140 3.921936 AAGGCAGCTGCAGCAGGAG 62.922 63.158 38.24 24.95 45.16 3.69
3117 3141 4.405671 GGCAGCTGCAGCAGGAGA 62.406 66.667 38.24 0.00 45.16 3.71
3118 3142 2.820479 GCAGCTGCAGCAGGAGAG 60.820 66.667 38.24 20.95 45.16 3.20
3119 3143 2.663796 CAGCTGCAGCAGGAGAGT 59.336 61.111 38.24 15.14 45.16 3.24
3120 3144 1.742140 CAGCTGCAGCAGGAGAGTG 60.742 63.158 38.24 22.65 45.16 3.51
3121 3145 2.215625 AGCTGCAGCAGGAGAGTGT 61.216 57.895 38.24 13.55 45.16 3.55
3122 3146 2.033755 GCTGCAGCAGGAGAGTGTG 61.034 63.158 33.36 0.00 41.59 3.82
3123 3147 2.031616 TGCAGCAGGAGAGTGTGC 59.968 61.111 0.00 0.00 40.17 4.57
3124 3148 2.031616 GCAGCAGGAGAGTGTGCA 59.968 61.111 0.00 0.00 42.47 4.57
3125 3149 1.598962 GCAGCAGGAGAGTGTGCAA 60.599 57.895 0.00 0.00 42.47 4.08
3126 3150 0.959372 GCAGCAGGAGAGTGTGCAAT 60.959 55.000 0.00 0.00 42.47 3.56
3127 3151 1.676916 GCAGCAGGAGAGTGTGCAATA 60.677 52.381 0.00 0.00 42.47 1.90
3128 3152 2.915349 CAGCAGGAGAGTGTGCAATAT 58.085 47.619 0.00 0.00 42.47 1.28
3129 3153 3.276857 CAGCAGGAGAGTGTGCAATATT 58.723 45.455 0.00 0.00 42.47 1.28
3130 3154 4.445453 CAGCAGGAGAGTGTGCAATATTA 58.555 43.478 0.00 0.00 42.47 0.98
3131 3155 4.510711 CAGCAGGAGAGTGTGCAATATTAG 59.489 45.833 0.00 0.00 42.47 1.73
3132 3156 3.812053 GCAGGAGAGTGTGCAATATTAGG 59.188 47.826 0.00 0.00 39.62 2.69
3133 3157 4.443457 GCAGGAGAGTGTGCAATATTAGGA 60.443 45.833 0.00 0.00 39.62 2.94
3134 3158 5.295950 CAGGAGAGTGTGCAATATTAGGAG 58.704 45.833 0.00 0.00 0.00 3.69
3135 3159 4.965532 AGGAGAGTGTGCAATATTAGGAGT 59.034 41.667 0.00 0.00 0.00 3.85
3136 3160 5.069781 AGGAGAGTGTGCAATATTAGGAGTC 59.930 44.000 0.00 0.00 0.00 3.36
3137 3161 5.283457 AGAGTGTGCAATATTAGGAGTCC 57.717 43.478 0.00 0.00 0.00 3.85
3138 3162 4.716784 AGAGTGTGCAATATTAGGAGTCCA 59.283 41.667 12.86 0.00 0.00 4.02
3139 3163 4.770795 AGTGTGCAATATTAGGAGTCCAC 58.229 43.478 12.86 0.00 0.00 4.02
3140 3164 4.471386 AGTGTGCAATATTAGGAGTCCACT 59.529 41.667 12.86 0.00 0.00 4.00
3141 3165 5.661312 AGTGTGCAATATTAGGAGTCCACTA 59.339 40.000 12.86 0.00 0.00 2.74
3142 3166 6.327626 AGTGTGCAATATTAGGAGTCCACTAT 59.672 38.462 12.86 4.01 0.00 2.12
3143 3167 6.647067 GTGTGCAATATTAGGAGTCCACTATC 59.353 42.308 12.86 0.00 0.00 2.08
3144 3168 6.554982 TGTGCAATATTAGGAGTCCACTATCT 59.445 38.462 12.86 0.00 0.00 1.98
3145 3169 7.728532 TGTGCAATATTAGGAGTCCACTATCTA 59.271 37.037 12.86 0.00 0.00 1.98
3146 3170 8.247562 GTGCAATATTAGGAGTCCACTATCTAG 58.752 40.741 12.86 0.00 0.00 2.43
3147 3171 7.950684 TGCAATATTAGGAGTCCACTATCTAGT 59.049 37.037 12.86 0.00 36.90 2.57
3148 3172 8.808092 GCAATATTAGGAGTCCACTATCTAGTT 58.192 37.037 12.86 0.00 33.46 2.24
3155 3179 8.290463 AGGAGTCCACTATCTAGTTATTAGGA 57.710 38.462 12.86 0.00 33.46 2.94
3156 3180 8.734763 AGGAGTCCACTATCTAGTTATTAGGAA 58.265 37.037 12.86 0.00 33.46 3.36
3157 3181 9.364653 GGAGTCCACTATCTAGTTATTAGGAAA 57.635 37.037 3.60 0.00 33.46 3.13
3159 3183 9.710818 AGTCCACTATCTAGTTATTAGGAAACA 57.289 33.333 0.00 0.00 33.46 2.83
3160 3184 9.968870 GTCCACTATCTAGTTATTAGGAAACAG 57.031 37.037 0.00 0.00 33.46 3.16
3161 3185 9.144298 TCCACTATCTAGTTATTAGGAAACAGG 57.856 37.037 0.00 0.00 33.46 4.00
3162 3186 9.144298 CCACTATCTAGTTATTAGGAAACAGGA 57.856 37.037 0.00 0.00 33.46 3.86
3167 3191 9.853177 ATCTAGTTATTAGGAAACAGGAATTGG 57.147 33.333 0.00 0.00 0.00 3.16
3168 3192 9.053472 TCTAGTTATTAGGAAACAGGAATTGGA 57.947 33.333 0.00 0.00 0.00 3.53
3169 3193 9.853177 CTAGTTATTAGGAAACAGGAATTGGAT 57.147 33.333 0.00 0.00 0.00 3.41
3173 3197 7.986085 ATTAGGAAACAGGAATTGGATATCG 57.014 36.000 0.00 0.00 0.00 2.92
3174 3198 5.630415 AGGAAACAGGAATTGGATATCGA 57.370 39.130 0.00 0.00 0.00 3.59
3175 3199 6.001449 AGGAAACAGGAATTGGATATCGAA 57.999 37.500 2.40 2.40 0.00 3.71
3176 3200 6.605119 AGGAAACAGGAATTGGATATCGAAT 58.395 36.000 7.11 7.11 0.00 3.34
3177 3201 6.488006 AGGAAACAGGAATTGGATATCGAATG 59.512 38.462 13.02 5.66 0.00 2.67
3178 3202 6.294176 GGAAACAGGAATTGGATATCGAATGG 60.294 42.308 13.02 6.85 0.00 3.16
3179 3203 5.310409 ACAGGAATTGGATATCGAATGGT 57.690 39.130 13.02 7.37 0.00 3.55
3180 3204 5.694995 ACAGGAATTGGATATCGAATGGTT 58.305 37.500 13.02 0.00 0.00 3.67
3181 3205 6.129179 ACAGGAATTGGATATCGAATGGTTT 58.871 36.000 13.02 0.00 0.00 3.27
3182 3206 6.607198 ACAGGAATTGGATATCGAATGGTTTT 59.393 34.615 13.02 0.00 0.00 2.43
3183 3207 6.919662 CAGGAATTGGATATCGAATGGTTTTG 59.080 38.462 13.02 5.43 0.00 2.44
3184 3208 6.607198 AGGAATTGGATATCGAATGGTTTTGT 59.393 34.615 13.02 0.00 0.00 2.83
3185 3209 6.918022 GGAATTGGATATCGAATGGTTTTGTC 59.082 38.462 13.02 5.82 0.00 3.18
3186 3210 5.828299 TTGGATATCGAATGGTTTTGTCC 57.172 39.130 0.00 0.00 0.00 4.02
3187 3211 4.204012 TGGATATCGAATGGTTTTGTCCC 58.796 43.478 0.00 0.00 0.00 4.46
3188 3212 4.204012 GGATATCGAATGGTTTTGTCCCA 58.796 43.478 0.00 0.00 36.16 4.37
3189 3213 4.827284 GGATATCGAATGGTTTTGTCCCAT 59.173 41.667 0.00 0.00 44.62 4.00
3190 3214 5.278463 GGATATCGAATGGTTTTGTCCCATG 60.278 44.000 0.00 0.00 41.87 3.66
3191 3215 2.166829 TCGAATGGTTTTGTCCCATGG 58.833 47.619 4.14 4.14 41.87 3.66
3192 3216 2.166829 CGAATGGTTTTGTCCCATGGA 58.833 47.619 15.22 0.00 41.87 3.41
3193 3217 2.560542 CGAATGGTTTTGTCCCATGGAA 59.439 45.455 15.22 0.00 41.87 3.53
3194 3218 3.367292 CGAATGGTTTTGTCCCATGGAAG 60.367 47.826 15.22 0.00 41.87 3.46
3195 3219 2.008242 TGGTTTTGTCCCATGGAAGG 57.992 50.000 15.22 0.00 31.38 3.46
3196 3220 1.219213 TGGTTTTGTCCCATGGAAGGT 59.781 47.619 15.22 0.00 31.38 3.50
3197 3221 2.325484 GGTTTTGTCCCATGGAAGGTT 58.675 47.619 15.22 0.00 31.38 3.50
3198 3222 2.703536 GGTTTTGTCCCATGGAAGGTTT 59.296 45.455 15.22 0.00 31.38 3.27
3199 3223 3.244078 GGTTTTGTCCCATGGAAGGTTTC 60.244 47.826 15.22 0.00 31.38 2.78
3211 3235 3.024547 GGAAGGTTTCCCTGCTATTTCC 58.975 50.000 0.00 0.00 44.30 3.13
3212 3236 3.563479 GGAAGGTTTCCCTGCTATTTCCA 60.563 47.826 0.00 0.00 44.30 3.53
3213 3237 3.825908 AGGTTTCCCTGCTATTTCCAA 57.174 42.857 0.00 0.00 40.58 3.53
3214 3238 4.126520 AGGTTTCCCTGCTATTTCCAAA 57.873 40.909 0.00 0.00 40.58 3.28
3215 3239 4.687976 AGGTTTCCCTGCTATTTCCAAAT 58.312 39.130 0.00 0.00 40.58 2.32
3216 3240 4.711846 AGGTTTCCCTGCTATTTCCAAATC 59.288 41.667 0.00 0.00 40.58 2.17
3217 3241 4.141937 GGTTTCCCTGCTATTTCCAAATCC 60.142 45.833 0.00 0.00 0.00 3.01
3218 3242 2.930950 TCCCTGCTATTTCCAAATCCG 58.069 47.619 0.00 0.00 0.00 4.18
3219 3243 2.241176 TCCCTGCTATTTCCAAATCCGT 59.759 45.455 0.00 0.00 0.00 4.69
3220 3244 3.023832 CCCTGCTATTTCCAAATCCGTT 58.976 45.455 0.00 0.00 0.00 4.44
3221 3245 4.080243 TCCCTGCTATTTCCAAATCCGTTA 60.080 41.667 0.00 0.00 0.00 3.18
3222 3246 4.036380 CCCTGCTATTTCCAAATCCGTTAC 59.964 45.833 0.00 0.00 0.00 2.50
3223 3247 4.260620 CCTGCTATTTCCAAATCCGTTACG 60.261 45.833 0.00 0.00 0.00 3.18
3224 3248 4.505808 TGCTATTTCCAAATCCGTTACGA 58.494 39.130 6.24 0.00 0.00 3.43
3225 3249 4.569162 TGCTATTTCCAAATCCGTTACGAG 59.431 41.667 6.24 0.00 0.00 4.18
3226 3250 4.569564 GCTATTTCCAAATCCGTTACGAGT 59.430 41.667 6.24 0.00 0.00 4.18
3227 3251 5.064325 GCTATTTCCAAATCCGTTACGAGTT 59.936 40.000 6.24 0.00 0.00 3.01
3228 3252 5.952526 ATTTCCAAATCCGTTACGAGTTT 57.047 34.783 6.24 3.94 0.00 2.66
3229 3253 4.735662 TTCCAAATCCGTTACGAGTTTG 57.264 40.909 19.74 19.74 33.96 2.93
3230 3254 3.731089 TCCAAATCCGTTACGAGTTTGT 58.269 40.909 22.50 0.00 33.10 2.83
3231 3255 4.128643 TCCAAATCCGTTACGAGTTTGTT 58.871 39.130 22.50 3.44 33.10 2.83
3232 3256 4.575645 TCCAAATCCGTTACGAGTTTGTTT 59.424 37.500 22.50 7.93 33.10 2.83
3233 3257 5.066246 TCCAAATCCGTTACGAGTTTGTTTT 59.934 36.000 22.50 7.30 33.10 2.43
3234 3258 5.172411 CCAAATCCGTTACGAGTTTGTTTTG 59.828 40.000 22.50 15.18 33.10 2.44
3235 3259 5.488645 AATCCGTTACGAGTTTGTTTTGT 57.511 34.783 6.24 0.00 0.00 2.83
3236 3260 4.943142 TCCGTTACGAGTTTGTTTTGTT 57.057 36.364 6.24 0.00 0.00 2.83
3237 3261 6.601741 ATCCGTTACGAGTTTGTTTTGTTA 57.398 33.333 6.24 0.00 0.00 2.41
3238 3262 6.601741 TCCGTTACGAGTTTGTTTTGTTAT 57.398 33.333 6.24 0.00 0.00 1.89
3239 3263 6.648502 TCCGTTACGAGTTTGTTTTGTTATC 58.351 36.000 6.24 0.00 0.00 1.75
3240 3264 5.847515 CCGTTACGAGTTTGTTTTGTTATCC 59.152 40.000 6.24 0.00 0.00 2.59
3241 3265 6.293027 CCGTTACGAGTTTGTTTTGTTATCCT 60.293 38.462 6.24 0.00 0.00 3.24
3242 3266 7.127686 CGTTACGAGTTTGTTTTGTTATCCTT 58.872 34.615 0.00 0.00 0.00 3.36
3243 3267 7.641020 CGTTACGAGTTTGTTTTGTTATCCTTT 59.359 33.333 0.00 0.00 0.00 3.11
3244 3268 8.950961 GTTACGAGTTTGTTTTGTTATCCTTTC 58.049 33.333 0.00 0.00 0.00 2.62
3245 3269 7.329588 ACGAGTTTGTTTTGTTATCCTTTCT 57.670 32.000 0.00 0.00 0.00 2.52
3246 3270 7.768240 ACGAGTTTGTTTTGTTATCCTTTCTT 58.232 30.769 0.00 0.00 0.00 2.52
3247 3271 8.895737 ACGAGTTTGTTTTGTTATCCTTTCTTA 58.104 29.630 0.00 0.00 0.00 2.10
3248 3272 9.382244 CGAGTTTGTTTTGTTATCCTTTCTTAG 57.618 33.333 0.00 0.00 0.00 2.18
3253 3277 9.629878 TTGTTTTGTTATCCTTTCTTAGTACCA 57.370 29.630 0.00 0.00 0.00 3.25
3254 3278 9.629878 TGTTTTGTTATCCTTTCTTAGTACCAA 57.370 29.630 0.00 0.00 0.00 3.67
3256 3280 9.856162 TTTTGTTATCCTTTCTTAGTACCAAGT 57.144 29.630 0.88 0.00 0.00 3.16
3257 3281 9.856162 TTTGTTATCCTTTCTTAGTACCAAGTT 57.144 29.630 0.88 0.00 0.00 2.66
3258 3282 8.842358 TGTTATCCTTTCTTAGTACCAAGTTG 57.158 34.615 0.88 0.00 0.00 3.16
3259 3283 8.434392 TGTTATCCTTTCTTAGTACCAAGTTGT 58.566 33.333 1.45 0.00 0.00 3.32
3260 3284 9.933723 GTTATCCTTTCTTAGTACCAAGTTGTA 57.066 33.333 1.45 0.00 0.00 2.41
3262 3286 8.843885 ATCCTTTCTTAGTACCAAGTTGTAAC 57.156 34.615 1.45 0.00 0.00 2.50
3263 3287 8.026396 TCCTTTCTTAGTACCAAGTTGTAACT 57.974 34.615 10.98 10.98 42.04 2.24
3264 3288 7.929785 TCCTTTCTTAGTACCAAGTTGTAACTG 59.070 37.037 14.48 3.08 39.66 3.16
3265 3289 7.172703 CCTTTCTTAGTACCAAGTTGTAACTGG 59.827 40.741 14.48 5.15 39.66 4.00
3274 3298 5.437060 CCAAGTTGTAACTGGGCTATATGT 58.563 41.667 5.29 0.00 42.91 2.29
3275 3299 6.588204 CCAAGTTGTAACTGGGCTATATGTA 58.412 40.000 5.29 0.00 42.91 2.29
3276 3300 6.706270 CCAAGTTGTAACTGGGCTATATGTAG 59.294 42.308 5.29 0.00 42.91 2.74
3277 3301 7.272978 CAAGTTGTAACTGGGCTATATGTAGT 58.727 38.462 0.00 0.00 39.66 2.73
3278 3302 7.052142 AGTTGTAACTGGGCTATATGTAGTC 57.948 40.000 0.00 0.00 37.98 2.59
3279 3303 6.839657 AGTTGTAACTGGGCTATATGTAGTCT 59.160 38.462 0.87 0.00 37.98 3.24
3280 3304 6.896021 TGTAACTGGGCTATATGTAGTCTC 57.104 41.667 0.87 0.00 33.01 3.36
3281 3305 6.611785 TGTAACTGGGCTATATGTAGTCTCT 58.388 40.000 0.87 0.00 33.01 3.10
3282 3306 7.752638 TGTAACTGGGCTATATGTAGTCTCTA 58.247 38.462 0.87 0.00 33.01 2.43
3283 3307 7.664731 TGTAACTGGGCTATATGTAGTCTCTAC 59.335 40.741 0.87 0.59 33.01 2.59
3284 3308 6.457159 ACTGGGCTATATGTAGTCTCTACT 57.543 41.667 0.87 0.00 39.91 2.57
3285 3309 7.571071 ACTGGGCTATATGTAGTCTCTACTA 57.429 40.000 0.87 0.00 37.15 1.82
3286 3310 7.626390 ACTGGGCTATATGTAGTCTCTACTAG 58.374 42.308 0.87 0.00 38.89 2.57
3287 3311 7.238096 ACTGGGCTATATGTAGTCTCTACTAGT 59.762 40.741 0.00 0.00 38.89 2.57
3288 3312 8.676397 TGGGCTATATGTAGTCTCTACTAGTA 57.324 38.462 1.89 1.89 38.89 1.82
3289 3313 8.760735 TGGGCTATATGTAGTCTCTACTAGTAG 58.239 40.741 21.87 21.87 38.89 2.57
3290 3314 8.980596 GGGCTATATGTAGTCTCTACTAGTAGA 58.019 40.741 27.03 27.03 38.89 2.59
3305 3329 9.574516 TCTACTAGTAGATCAATAAGACATGCA 57.425 33.333 25.58 0.00 37.28 3.96
3308 3332 8.918116 ACTAGTAGATCAATAAGACATGCAAGA 58.082 33.333 3.59 0.00 0.00 3.02
3309 3333 9.755804 CTAGTAGATCAATAAGACATGCAAGAA 57.244 33.333 0.00 0.00 0.00 2.52
3317 3341 9.187996 TCAATAAGACATGCAAGAATAATTCCA 57.812 29.630 0.00 0.00 0.00 3.53
3318 3342 9.806203 CAATAAGACATGCAAGAATAATTCCAA 57.194 29.630 0.00 0.00 0.00 3.53
3323 3347 9.584008 AGACATGCAAGAATAATTCCAATATCT 57.416 29.630 0.00 0.00 0.00 1.98
3324 3348 9.837525 GACATGCAAGAATAATTCCAATATCTC 57.162 33.333 0.00 0.00 0.00 2.75
3325 3349 8.800332 ACATGCAAGAATAATTCCAATATCTCC 58.200 33.333 0.00 0.00 0.00 3.71
3326 3350 9.021807 CATGCAAGAATAATTCCAATATCTCCT 57.978 33.333 0.00 0.00 0.00 3.69
3327 3351 8.627208 TGCAAGAATAATTCCAATATCTCCTC 57.373 34.615 0.00 0.00 0.00 3.71
3328 3352 7.667219 TGCAAGAATAATTCCAATATCTCCTCC 59.333 37.037 0.00 0.00 0.00 4.30
3329 3353 7.121907 GCAAGAATAATTCCAATATCTCCTCCC 59.878 40.741 0.00 0.00 0.00 4.30
3330 3354 7.277405 AGAATAATTCCAATATCTCCTCCCC 57.723 40.000 0.00 0.00 0.00 4.81
3331 3355 7.034454 AGAATAATTCCAATATCTCCTCCCCT 58.966 38.462 0.00 0.00 0.00 4.79
3332 3356 6.649041 ATAATTCCAATATCTCCTCCCCTG 57.351 41.667 0.00 0.00 0.00 4.45
3333 3357 1.734655 TCCAATATCTCCTCCCCTGC 58.265 55.000 0.00 0.00 0.00 4.85
3334 3358 1.224120 TCCAATATCTCCTCCCCTGCT 59.776 52.381 0.00 0.00 0.00 4.24
3335 3359 2.454772 TCCAATATCTCCTCCCCTGCTA 59.545 50.000 0.00 0.00 0.00 3.49
3336 3360 3.079689 TCCAATATCTCCTCCCCTGCTAT 59.920 47.826 0.00 0.00 0.00 2.97
3337 3361 3.454082 CCAATATCTCCTCCCCTGCTATC 59.546 52.174 0.00 0.00 0.00 2.08
3338 3362 4.360889 CAATATCTCCTCCCCTGCTATCT 58.639 47.826 0.00 0.00 0.00 1.98
3339 3363 2.323999 ATCTCCTCCCCTGCTATCTG 57.676 55.000 0.00 0.00 0.00 2.90
3340 3364 0.470833 TCTCCTCCCCTGCTATCTGC 60.471 60.000 0.00 0.00 43.25 4.26
3341 3365 1.814772 CTCCTCCCCTGCTATCTGCG 61.815 65.000 0.00 0.00 46.63 5.18
3342 3366 2.030262 CTCCCCTGCTATCTGCGC 59.970 66.667 0.00 0.00 46.63 6.09
3343 3367 3.527775 CTCCCCTGCTATCTGCGCC 62.528 68.421 4.18 0.00 46.63 6.53
3344 3368 3.554342 CCCCTGCTATCTGCGCCT 61.554 66.667 4.18 0.00 46.63 5.52
3345 3369 2.507944 CCCTGCTATCTGCGCCTT 59.492 61.111 4.18 0.00 46.63 4.35
3346 3370 1.890979 CCCTGCTATCTGCGCCTTG 60.891 63.158 4.18 0.00 46.63 3.61
3347 3371 2.541120 CCTGCTATCTGCGCCTTGC 61.541 63.158 4.18 2.92 46.63 4.01
3357 3381 4.785453 CGCCTTGCACCCCCTCTC 62.785 72.222 0.00 0.00 0.00 3.20
3358 3382 3.334054 GCCTTGCACCCCCTCTCT 61.334 66.667 0.00 0.00 0.00 3.10
3359 3383 2.993853 CCTTGCACCCCCTCTCTC 59.006 66.667 0.00 0.00 0.00 3.20
3360 3384 2.674220 CCTTGCACCCCCTCTCTCC 61.674 68.421 0.00 0.00 0.00 3.71
3361 3385 2.610859 TTGCACCCCCTCTCTCCC 60.611 66.667 0.00 0.00 0.00 4.30
3362 3386 4.741239 TGCACCCCCTCTCTCCCC 62.741 72.222 0.00 0.00 0.00 4.81
3363 3387 4.423209 GCACCCCCTCTCTCCCCT 62.423 72.222 0.00 0.00 0.00 4.79
3364 3388 2.041405 CACCCCCTCTCTCCCCTC 60.041 72.222 0.00 0.00 0.00 4.30
3365 3389 2.204705 ACCCCCTCTCTCCCCTCT 60.205 66.667 0.00 0.00 0.00 3.69
3366 3390 1.088896 ACCCCCTCTCTCCCCTCTA 59.911 63.158 0.00 0.00 0.00 2.43
3367 3391 1.002242 ACCCCCTCTCTCCCCTCTAG 61.002 65.000 0.00 0.00 0.00 2.43
3368 3392 0.703056 CCCCCTCTCTCCCCTCTAGA 60.703 65.000 0.00 0.00 0.00 2.43
3369 3393 0.481128 CCCCTCTCTCCCCTCTAGAC 59.519 65.000 0.00 0.00 0.00 2.59
3370 3394 1.227249 CCCTCTCTCCCCTCTAGACA 58.773 60.000 0.00 0.00 0.00 3.41
3371 3395 1.144913 CCCTCTCTCCCCTCTAGACAG 59.855 61.905 0.00 0.00 0.00 3.51
3372 3396 1.478654 CCTCTCTCCCCTCTAGACAGC 60.479 61.905 0.00 0.00 0.00 4.40
3373 3397 0.553819 TCTCTCCCCTCTAGACAGCC 59.446 60.000 0.00 0.00 0.00 4.85
3374 3398 0.260230 CTCTCCCCTCTAGACAGCCA 59.740 60.000 0.00 0.00 0.00 4.75
3375 3399 0.937441 TCTCCCCTCTAGACAGCCAT 59.063 55.000 0.00 0.00 0.00 4.40
3376 3400 1.047002 CTCCCCTCTAGACAGCCATG 58.953 60.000 0.00 0.00 0.00 3.66
3377 3401 0.399091 TCCCCTCTAGACAGCCATGG 60.399 60.000 7.63 7.63 0.00 3.66
3378 3402 1.414061 CCCCTCTAGACAGCCATGGG 61.414 65.000 15.13 0.00 0.00 4.00
3379 3403 0.692419 CCCTCTAGACAGCCATGGGT 60.692 60.000 11.62 11.62 0.00 4.51
3380 3404 1.413082 CCCTCTAGACAGCCATGGGTA 60.413 57.143 17.80 0.00 0.00 3.69
3381 3405 2.398588 CCTCTAGACAGCCATGGGTAA 58.601 52.381 17.80 1.72 0.00 2.85
3382 3406 2.771943 CCTCTAGACAGCCATGGGTAAA 59.228 50.000 17.80 1.34 0.00 2.01
3383 3407 3.432326 CCTCTAGACAGCCATGGGTAAAC 60.432 52.174 17.80 10.78 0.00 2.01
3384 3408 2.167693 TCTAGACAGCCATGGGTAAACG 59.832 50.000 17.80 6.80 0.00 3.60
3385 3409 0.981183 AGACAGCCATGGGTAAACGA 59.019 50.000 17.80 0.00 0.00 3.85
3386 3410 1.066143 AGACAGCCATGGGTAAACGAG 60.066 52.381 17.80 5.59 0.00 4.18
3387 3411 0.035439 ACAGCCATGGGTAAACGAGG 60.035 55.000 17.80 4.79 0.00 4.63
3388 3412 0.251916 CAGCCATGGGTAAACGAGGA 59.748 55.000 17.80 0.00 0.00 3.71
3389 3413 0.541863 AGCCATGGGTAAACGAGGAG 59.458 55.000 16.58 0.00 0.00 3.69
3390 3414 0.463833 GCCATGGGTAAACGAGGAGG 60.464 60.000 15.13 0.00 0.00 4.30
3391 3415 0.463833 CCATGGGTAAACGAGGAGGC 60.464 60.000 2.85 0.00 0.00 4.70
3392 3416 0.463833 CATGGGTAAACGAGGAGGCC 60.464 60.000 0.00 0.00 0.00 5.19
3393 3417 0.912487 ATGGGTAAACGAGGAGGCCA 60.912 55.000 5.01 0.00 0.00 5.36
3394 3418 1.221021 GGGTAAACGAGGAGGCCAG 59.779 63.158 5.01 0.00 0.00 4.85
3395 3419 1.449778 GGTAAACGAGGAGGCCAGC 60.450 63.158 5.01 0.00 0.00 4.85
3396 3420 1.449778 GTAAACGAGGAGGCCAGCC 60.450 63.158 5.01 5.93 0.00 4.85
3407 3431 3.798511 GCCAGCCTCACCCCCTAC 61.799 72.222 0.00 0.00 0.00 3.18
3408 3432 3.090532 CCAGCCTCACCCCCTACC 61.091 72.222 0.00 0.00 0.00 3.18
3409 3433 2.285368 CAGCCTCACCCCCTACCA 60.285 66.667 0.00 0.00 0.00 3.25
3410 3434 2.041265 AGCCTCACCCCCTACCAG 59.959 66.667 0.00 0.00 0.00 4.00
3411 3435 3.798511 GCCTCACCCCCTACCAGC 61.799 72.222 0.00 0.00 0.00 4.85
3412 3436 3.090532 CCTCACCCCCTACCAGCC 61.091 72.222 0.00 0.00 0.00 4.85
3413 3437 2.285368 CTCACCCCCTACCAGCCA 60.285 66.667 0.00 0.00 0.00 4.75
3414 3438 1.694169 CTCACCCCCTACCAGCCAT 60.694 63.158 0.00 0.00 0.00 4.40
3415 3439 1.987807 CTCACCCCCTACCAGCCATG 61.988 65.000 0.00 0.00 0.00 3.66
3416 3440 2.000701 CACCCCCTACCAGCCATGA 61.001 63.158 0.00 0.00 0.00 3.07
3417 3441 1.006092 ACCCCCTACCAGCCATGAT 59.994 57.895 0.00 0.00 0.00 2.45
3418 3442 1.062488 ACCCCCTACCAGCCATGATC 61.062 60.000 0.00 0.00 0.00 2.92
3419 3443 1.061905 CCCCCTACCAGCCATGATCA 61.062 60.000 0.00 0.00 0.00 2.92
3420 3444 1.070604 CCCCTACCAGCCATGATCAT 58.929 55.000 1.18 1.18 0.00 2.45
3421 3445 2.269023 CCCCTACCAGCCATGATCATA 58.731 52.381 8.15 0.00 0.00 2.15
3422 3446 2.644299 CCCCTACCAGCCATGATCATAA 59.356 50.000 8.15 0.00 0.00 1.90
3423 3447 3.560025 CCCCTACCAGCCATGATCATAAC 60.560 52.174 8.15 3.40 0.00 1.89
3424 3448 3.560025 CCCTACCAGCCATGATCATAACC 60.560 52.174 8.15 0.00 0.00 2.85
3425 3449 3.328931 CCTACCAGCCATGATCATAACCT 59.671 47.826 8.15 2.12 0.00 3.50
3426 3450 3.219176 ACCAGCCATGATCATAACCTG 57.781 47.619 8.15 13.69 0.00 4.00
3427 3451 1.884579 CCAGCCATGATCATAACCTGC 59.115 52.381 8.15 6.56 0.00 4.85
3428 3452 1.534163 CAGCCATGATCATAACCTGCG 59.466 52.381 8.15 0.00 0.00 5.18
3429 3453 0.239347 GCCATGATCATAACCTGCGC 59.761 55.000 8.15 0.00 0.00 6.09
3430 3454 1.888215 CCATGATCATAACCTGCGCT 58.112 50.000 8.15 0.00 0.00 5.92
3431 3455 1.534163 CCATGATCATAACCTGCGCTG 59.466 52.381 8.15 8.47 0.00 5.18
3432 3456 1.069432 CATGATCATAACCTGCGCTGC 60.069 52.381 8.15 0.00 0.00 5.25
3433 3457 0.178767 TGATCATAACCTGCGCTGCT 59.821 50.000 9.73 0.24 0.00 4.24
3434 3458 1.412343 TGATCATAACCTGCGCTGCTA 59.588 47.619 9.73 2.78 0.00 3.49
3435 3459 1.795286 GATCATAACCTGCGCTGCTAC 59.205 52.381 9.73 0.00 0.00 3.58
3436 3460 0.179084 TCATAACCTGCGCTGCTACC 60.179 55.000 9.73 0.00 0.00 3.18
3437 3461 1.146263 ATAACCTGCGCTGCTACCC 59.854 57.895 9.73 0.00 0.00 3.69
3438 3462 1.338136 ATAACCTGCGCTGCTACCCT 61.338 55.000 9.73 0.00 0.00 4.34
3439 3463 0.685131 TAACCTGCGCTGCTACCCTA 60.685 55.000 9.73 0.00 0.00 3.53
3440 3464 1.550130 AACCTGCGCTGCTACCCTAA 61.550 55.000 9.73 0.00 0.00 2.69
3441 3465 1.220749 CCTGCGCTGCTACCCTAAA 59.779 57.895 9.73 0.00 0.00 1.85
3442 3466 1.090052 CCTGCGCTGCTACCCTAAAC 61.090 60.000 9.73 0.00 0.00 2.01
3443 3467 1.078708 TGCGCTGCTACCCTAAACC 60.079 57.895 9.73 0.00 0.00 3.27
3444 3468 2.171725 GCGCTGCTACCCTAAACCG 61.172 63.158 0.00 0.00 0.00 4.44
3445 3469 1.217244 CGCTGCTACCCTAAACCGT 59.783 57.895 0.00 0.00 0.00 4.83
3446 3470 0.390735 CGCTGCTACCCTAAACCGTT 60.391 55.000 0.00 0.00 0.00 4.44
3447 3471 1.366679 GCTGCTACCCTAAACCGTTC 58.633 55.000 0.00 0.00 0.00 3.95
3448 3472 2.010544 GCTGCTACCCTAAACCGTTCC 61.011 57.143 0.00 0.00 0.00 3.62
3449 3473 0.614812 TGCTACCCTAAACCGTTCCC 59.385 55.000 0.00 0.00 0.00 3.97
3450 3474 0.107508 GCTACCCTAAACCGTTCCCC 60.108 60.000 0.00 0.00 0.00 4.81
3451 3475 0.543277 CTACCCTAAACCGTTCCCCC 59.457 60.000 0.00 0.00 0.00 5.40
3465 3489 4.435970 CCCCCACCTTTACGCCCC 62.436 72.222 0.00 0.00 0.00 5.80
3466 3490 3.653078 CCCCACCTTTACGCCCCA 61.653 66.667 0.00 0.00 0.00 4.96
3467 3491 2.360726 CCCACCTTTACGCCCCAC 60.361 66.667 0.00 0.00 0.00 4.61
3468 3492 2.432563 CCACCTTTACGCCCCACA 59.567 61.111 0.00 0.00 0.00 4.17
3469 3493 1.674322 CCACCTTTACGCCCCACAG 60.674 63.158 0.00 0.00 0.00 3.66
3470 3494 2.033602 ACCTTTACGCCCCACAGC 59.966 61.111 0.00 0.00 0.00 4.40
3471 3495 2.750237 CCTTTACGCCCCACAGCC 60.750 66.667 0.00 0.00 0.00 4.85
3472 3496 2.750237 CTTTACGCCCCACAGCCC 60.750 66.667 0.00 0.00 0.00 5.19
3473 3497 3.561120 CTTTACGCCCCACAGCCCA 62.561 63.158 0.00 0.00 0.00 5.36
3474 3498 2.837031 CTTTACGCCCCACAGCCCAT 62.837 60.000 0.00 0.00 0.00 4.00
3475 3499 3.636929 TTACGCCCCACAGCCCATG 62.637 63.158 0.00 0.00 0.00 3.66
3478 3502 4.365111 GCCCCACAGCCCATGACA 62.365 66.667 0.00 0.00 0.00 3.58
3481 3505 0.258484 CCCCACAGCCCATGACAATA 59.742 55.000 0.00 0.00 0.00 1.90
3487 3511 1.143813 AGCCCATGACAATAGGGGAG 58.856 55.000 11.61 0.00 44.41 4.30
3508 3532 0.545646 ATGGAGCAGAAAGAGAGGCC 59.454 55.000 0.00 0.00 0.00 5.19
3509 3533 0.546267 TGGAGCAGAAAGAGAGGCCT 60.546 55.000 3.86 3.86 0.00 5.19
3511 3535 0.901124 GAGCAGAAAGAGAGGCCTCA 59.099 55.000 33.90 0.00 41.87 3.86
3515 3539 2.234908 GCAGAAAGAGAGGCCTCAACTA 59.765 50.000 33.90 0.00 41.87 2.24
3516 3540 3.678529 GCAGAAAGAGAGGCCTCAACTAG 60.679 52.174 33.90 20.44 41.87 2.57
3534 3558 8.142994 TCAACTAGAGAAATTCAGAACAACAC 57.857 34.615 0.00 0.00 0.00 3.32
3548 3572 6.094742 TCAGAACAACACTGAATAAACAAGCA 59.905 34.615 0.00 0.00 40.70 3.91
3549 3573 6.415867 CAGAACAACACTGAATAAACAAGCAG 59.584 38.462 0.00 0.00 37.54 4.24
3553 3577 5.941948 ACACTGAATAAACAAGCAGGTAC 57.058 39.130 0.00 0.00 32.82 3.34
3554 3578 5.373222 ACACTGAATAAACAAGCAGGTACA 58.627 37.500 0.00 0.00 32.82 2.90
3562 3586 8.630054 AATAAACAAGCAGGTACAAAGACATA 57.370 30.769 0.00 0.00 0.00 2.29
3578 3607 9.023962 ACAAAGACATAATCCTGCATAAAAAGA 57.976 29.630 0.00 0.00 0.00 2.52
3673 4325 4.338964 CCATGGTGTTCTGCAATAATAGCA 59.661 41.667 2.57 10.92 40.19 3.49
3674 4326 4.963276 TGGTGTTCTGCAATAATAGCAC 57.037 40.909 6.14 0.00 37.02 4.40
3675 4327 4.588899 TGGTGTTCTGCAATAATAGCACT 58.411 39.130 6.14 0.00 37.02 4.40
3676 4328 5.739959 TGGTGTTCTGCAATAATAGCACTA 58.260 37.500 6.14 0.00 37.02 2.74
3677 4329 5.584649 TGGTGTTCTGCAATAATAGCACTAC 59.415 40.000 6.14 0.00 37.02 2.73
3678 4330 5.584649 GGTGTTCTGCAATAATAGCACTACA 59.415 40.000 0.00 0.00 37.02 2.74
3679 4331 6.093495 GGTGTTCTGCAATAATAGCACTACAA 59.907 38.462 0.00 0.00 37.02 2.41
3680 4332 6.961554 GTGTTCTGCAATAATAGCACTACAAC 59.038 38.462 0.00 0.00 37.02 3.32
3681 4333 6.652900 TGTTCTGCAATAATAGCACTACAACA 59.347 34.615 0.00 0.00 37.02 3.33
3682 4334 7.174080 TGTTCTGCAATAATAGCACTACAACAA 59.826 33.333 0.00 0.00 37.02 2.83
3683 4335 7.307493 TCTGCAATAATAGCACTACAACAAG 57.693 36.000 0.00 0.00 37.02 3.16
3684 4336 6.878923 TCTGCAATAATAGCACTACAACAAGT 59.121 34.615 0.00 0.00 37.02 3.16
3685 4337 7.390440 TCTGCAATAATAGCACTACAACAAGTT 59.610 33.333 0.00 0.00 37.02 2.66
3686 4338 7.304735 TGCAATAATAGCACTACAACAAGTTG 58.695 34.615 11.16 11.16 40.62 3.16
3687 4339 7.040755 TGCAATAATAGCACTACAACAAGTTGT 60.041 33.333 20.79 20.79 45.28 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.153086 GTTCCAGGATGCCAGCGAT 60.153 57.895 0.00 0.00 31.97 4.58
18 19 3.117888 AGACAACACTGTTGTTCCAGGAT 60.118 43.478 24.93 3.42 44.57 3.24
38 39 1.486211 GCCTTCCCAGCTACAGTAGA 58.514 55.000 12.15 0.00 0.00 2.59
41 42 1.913762 ACGCCTTCCCAGCTACAGT 60.914 57.895 0.00 0.00 0.00 3.55
102 103 3.039202 GCCGGTGCCGTTCAATCTG 62.039 63.158 1.90 0.00 37.81 2.90
130 131 1.984570 CAAGGTCTGGGGAGAGCGA 60.985 63.158 0.00 0.00 40.82 4.93
143 144 2.227737 AACGTGAGGTTCCCAAGGT 58.772 52.632 0.00 0.00 31.79 3.50
190 191 3.796764 GGATCTCCCCTTTCAGCTG 57.203 57.895 7.63 7.63 0.00 4.24
300 301 4.704540 AGTTCCATTATTTTCATGCCGACA 59.295 37.500 0.00 0.00 0.00 4.35
304 305 7.223387 GTGATGAAGTTCCATTATTTTCATGCC 59.777 37.037 0.00 0.00 38.28 4.40
312 313 7.039504 AGCTTGTTGTGATGAAGTTCCATTATT 60.040 33.333 0.00 0.00 0.00 1.40
320 321 4.441913 CCCAAAGCTTGTTGTGATGAAGTT 60.442 41.667 0.00 0.00 0.00 2.66
324 325 1.962807 CCCCAAAGCTTGTTGTGATGA 59.037 47.619 0.00 0.00 0.00 2.92
327 328 1.398958 GCCCCCAAAGCTTGTTGTGA 61.399 55.000 0.00 0.00 0.00 3.58
328 329 1.069596 GCCCCCAAAGCTTGTTGTG 59.930 57.895 0.00 0.00 0.00 3.33
355 356 0.951040 AGTTTTTCGCCGAGCTCAGG 60.951 55.000 15.40 16.40 0.00 3.86
378 379 4.240888 TGAGCGAGATTTCAGTCAAGAAG 58.759 43.478 0.00 0.00 0.00 2.85
399 400 1.233019 CTGTGAAGCTGTTGTCCCTG 58.767 55.000 0.00 0.00 0.00 4.45
403 404 1.518903 GGCCCTGTGAAGCTGTTGTC 61.519 60.000 0.00 0.00 0.00 3.18
508 509 1.530283 TGCTCTGCATGCTGCCTAT 59.470 52.632 20.33 0.00 44.23 2.57
532 540 6.116806 TGTTGTTTGTGGACAGTAGTAATGT 58.883 36.000 2.26 2.26 0.00 2.71
533 541 6.612247 TGTTGTTTGTGGACAGTAGTAATG 57.388 37.500 0.00 0.00 0.00 1.90
534 542 7.224297 AGATGTTGTTTGTGGACAGTAGTAAT 58.776 34.615 0.00 0.00 0.00 1.89
537 545 5.036117 AGATGTTGTTTGTGGACAGTAGT 57.964 39.130 0.00 0.00 0.00 2.73
538 546 5.178252 CAGAGATGTTGTTTGTGGACAGTAG 59.822 44.000 0.00 0.00 0.00 2.57
539 547 5.056480 CAGAGATGTTGTTTGTGGACAGTA 58.944 41.667 0.00 0.00 0.00 2.74
540 548 3.879295 CAGAGATGTTGTTTGTGGACAGT 59.121 43.478 0.00 0.00 0.00 3.55
543 551 3.214328 ACCAGAGATGTTGTTTGTGGAC 58.786 45.455 0.00 0.00 0.00 4.02
548 556 5.392380 GGAAGCATACCAGAGATGTTGTTTG 60.392 44.000 0.00 0.00 0.00 2.93
556 564 2.769209 AGGTGGAAGCATACCAGAGAT 58.231 47.619 0.00 0.00 39.46 2.75
594 602 4.507710 CGATCCAAAGAGATTCCAGTGAA 58.492 43.478 0.00 0.00 34.33 3.18
611 619 3.050275 GGCTATTGCGCCCGATCC 61.050 66.667 4.18 0.00 44.41 3.36
626 634 5.942236 TCATTCAGAATGCTTCCATATAGGC 59.058 40.000 17.26 0.00 38.77 3.93
627 635 9.848710 ATATCATTCAGAATGCTTCCATATAGG 57.151 33.333 17.26 0.00 38.77 2.57
658 666 3.568538 CTTTCATCTTGGGAAACTTGCG 58.431 45.455 0.00 0.00 31.44 4.85
717 725 6.820205 AGATAGATTGGATATTGAGGAGGGA 58.180 40.000 0.00 0.00 0.00 4.20
765 773 6.821665 GCACATACCCACTAAATCTGTTCTTA 59.178 38.462 0.00 0.00 0.00 2.10
771 779 4.130118 GAGGCACATACCCACTAAATCTG 58.870 47.826 0.00 0.00 0.00 2.90
798 806 0.824759 GAGCTCCTAGCCTTCCGAAA 59.175 55.000 0.87 0.00 43.77 3.46
801 809 1.460273 GGAGAGCTCCTAGCCTTCCG 61.460 65.000 10.93 0.00 43.77 4.30
826 834 2.167075 GCTTATTGCCAGCCAAGTTCAT 59.833 45.455 0.00 0.00 36.76 2.57
862 870 2.102578 GATGAATTCCCACCCCTTGTG 58.897 52.381 2.27 0.00 45.01 3.33
919 927 2.414824 CGAAAGAGTCTCCTCCGAGTTG 60.415 54.545 0.00 0.00 38.58 3.16
927 935 1.633774 TTCCTGCGAAAGAGTCTCCT 58.366 50.000 0.00 0.00 0.00 3.69
930 938 3.477210 AGTTTTCCTGCGAAAGAGTCT 57.523 42.857 0.00 0.00 39.14 3.24
931 939 3.432592 GGTAGTTTTCCTGCGAAAGAGTC 59.567 47.826 0.00 0.00 39.14 3.36
946 954 4.819105 TCACAATCGATCCAGGTAGTTT 57.181 40.909 0.00 0.00 0.00 2.66
957 965 6.123651 AGTACTAGAGAGGTTCACAATCGAT 58.876 40.000 0.00 0.00 0.00 3.59
975 983 5.926580 AGTATAAGGCCTGGAGAGTACTA 57.073 43.478 5.69 0.00 0.00 1.82
977 985 6.973460 TTAAGTATAAGGCCTGGAGAGTAC 57.027 41.667 5.69 3.74 0.00 2.73
978 986 6.497259 CCATTAAGTATAAGGCCTGGAGAGTA 59.503 42.308 5.69 0.00 0.00 2.59
1104 1112 2.941720 GTCTCCTAGCTTTCCAATGCTG 59.058 50.000 9.39 1.53 39.42 4.41
1113 1121 3.416156 CAAAGCCAAGTCTCCTAGCTTT 58.584 45.455 0.00 2.62 44.75 3.51
1130 1138 4.829064 TTGTTGTACAAGGCTAGCAAAG 57.171 40.909 18.24 7.52 32.34 2.77
1132 1140 4.394920 GCTATTGTTGTACAAGGCTAGCAA 59.605 41.667 24.48 17.89 41.94 3.91
1133 1141 3.938963 GCTATTGTTGTACAAGGCTAGCA 59.061 43.478 24.48 12.07 41.94 3.49
1206 1214 6.441274 CAAGTTGCCATAGTATGCATAAAGG 58.559 40.000 8.28 9.02 37.33 3.11
1269 1277 5.175126 CGTTGACAGATCGAGTACAAAAAGT 59.825 40.000 0.00 0.00 0.00 2.66
1338 1346 2.044555 GTACCAAGAAAGGCCCGGC 61.045 63.158 0.00 0.00 0.00 6.13
1341 1349 1.074889 TCCAAGTACCAAGAAAGGCCC 59.925 52.381 0.00 0.00 0.00 5.80
1429 1437 6.542821 ACAACTGGTTTCCTGATAGAATCAA 58.457 36.000 0.00 0.00 39.11 2.57
1461 1469 5.527582 GCAATTCTCAATACTGTCGGGTATT 59.472 40.000 0.00 0.00 41.38 1.89
1477 1485 5.590259 ACCATACCAACACTATGCAATTCTC 59.410 40.000 0.00 0.00 0.00 2.87
1518 1526 2.159226 AGGTATGCTTCCTTCGAACGAG 60.159 50.000 0.00 0.00 30.18 4.18
1659 1667 5.714806 GGGGATTGATCCTGAAAAGTTGTTA 59.285 40.000 9.73 0.00 46.35 2.41
1683 1691 6.521133 GTGATGTCAAATTCTTTAGAACTGCG 59.479 38.462 0.00 0.00 36.80 5.18
1693 1701 9.467258 CAATTTGTACAGTGATGTCAAATTCTT 57.533 29.630 18.15 6.65 42.67 2.52
1730 1738 0.455633 CTCGCCTTGCAGATTGTTGC 60.456 55.000 0.00 0.00 44.33 4.17
1938 1952 7.824779 AGTATCCAAACCAGAAGAATAACTGAC 59.175 37.037 0.00 0.00 36.38 3.51
1953 1967 4.021981 AGCTTCTTGCAAAGTATCCAAACC 60.022 41.667 0.00 0.00 46.34 3.27
1979 1993 5.366482 TGCTAATGTATTCTGGCTTGGTA 57.634 39.130 0.00 0.00 0.00 3.25
2002 2016 7.989416 AATGGTCATCAGCAATTGAATTTTT 57.011 28.000 10.34 0.00 39.77 1.94
2124 2138 6.090129 TGTTCTTTCTTCAGTTTCCAAAACG 58.910 36.000 0.00 0.00 0.00 3.60
2175 2189 2.840651 ACTCTTGGAATACCTGGACTGG 59.159 50.000 0.00 0.00 37.04 4.00
2178 2192 5.313712 TCAAAACTCTTGGAATACCTGGAC 58.686 41.667 0.00 0.00 37.04 4.02
2208 2222 0.615331 TCCTTCTCATGGCCTCACAC 59.385 55.000 3.32 0.00 0.00 3.82
2253 2267 4.304110 TGACGCTCGAACAAGAAGTAATT 58.696 39.130 0.00 0.00 0.00 1.40
2321 2335 3.831911 CCAACCATCCAAGTTACCATTGT 59.168 43.478 0.00 0.00 0.00 2.71
2366 2380 5.002464 ACCGAGCGTGTTGTTTATAGTAT 57.998 39.130 0.00 0.00 0.00 2.12
2367 2381 4.156556 AGACCGAGCGTGTTGTTTATAGTA 59.843 41.667 0.00 0.00 0.00 1.82
2462 2476 5.444122 GCTTAAGATCGCAATGGATTACAC 58.556 41.667 6.67 0.00 0.00 2.90
2463 2477 4.515191 GGCTTAAGATCGCAATGGATTACA 59.485 41.667 6.67 0.00 0.00 2.41
2535 2549 3.407424 TGAAGGATCCTTGATATGCCG 57.593 47.619 31.79 0.00 36.26 5.69
2670 2692 4.102524 TCTGGTTAGCATTCCATATTCGGT 59.897 41.667 0.00 0.00 33.01 4.69
2671 2693 4.641396 TCTGGTTAGCATTCCATATTCGG 58.359 43.478 0.00 0.00 33.01 4.30
2801 2825 1.066858 TCTCTGAATGTGCCTTCCGTC 60.067 52.381 0.00 0.00 0.00 4.79
2804 2828 3.614092 TGAATCTCTGAATGTGCCTTCC 58.386 45.455 0.00 0.00 0.00 3.46
2907 2931 5.830912 ACTTGTGGTGTTATCATGTTGTTG 58.169 37.500 0.00 0.00 0.00 3.33
2924 2948 5.525378 GCACTCCTGGATTCTAATACTTGTG 59.475 44.000 0.00 0.00 0.00 3.33
2984 3008 1.149148 GGTCTCGAGGCTGTTGTTTC 58.851 55.000 17.97 0.00 0.00 2.78
2987 3011 1.901948 TCGGTCTCGAGGCTGTTGT 60.902 57.895 24.49 0.00 40.88 3.32
3064 3088 0.036294 GCTGGTAAGTGAGACCCCAC 60.036 60.000 0.00 0.00 35.99 4.61
3066 3090 0.036294 GTGCTGGTAAGTGAGACCCC 60.036 60.000 0.00 0.00 35.99 4.95
3067 3091 0.685097 TGTGCTGGTAAGTGAGACCC 59.315 55.000 0.00 0.00 35.99 4.46
3068 3092 1.338200 CCTGTGCTGGTAAGTGAGACC 60.338 57.143 0.00 0.00 37.49 3.85
3069 3093 1.618837 TCCTGTGCTGGTAAGTGAGAC 59.381 52.381 0.00 0.00 0.00 3.36
3070 3094 1.895798 CTCCTGTGCTGGTAAGTGAGA 59.104 52.381 0.00 0.00 0.00 3.27
3071 3095 1.066573 CCTCCTGTGCTGGTAAGTGAG 60.067 57.143 0.00 0.00 0.00 3.51
3072 3096 0.976641 CCTCCTGTGCTGGTAAGTGA 59.023 55.000 0.00 0.00 0.00 3.41
3073 3097 0.976641 TCCTCCTGTGCTGGTAAGTG 59.023 55.000 0.00 0.00 0.00 3.16
3074 3098 1.203187 TCTCCTCCTGTGCTGGTAAGT 60.203 52.381 0.00 0.00 0.00 2.24
3075 3099 1.205893 GTCTCCTCCTGTGCTGGTAAG 59.794 57.143 0.00 0.00 0.00 2.34
3076 3100 1.267121 GTCTCCTCCTGTGCTGGTAA 58.733 55.000 0.00 0.00 0.00 2.85
3077 3101 0.614979 GGTCTCCTCCTGTGCTGGTA 60.615 60.000 0.00 0.00 0.00 3.25
3078 3102 1.915769 GGTCTCCTCCTGTGCTGGT 60.916 63.158 0.00 0.00 0.00 4.00
3079 3103 2.664081 GGGTCTCCTCCTGTGCTGG 61.664 68.421 0.00 0.00 0.00 4.85
3080 3104 1.483595 TTGGGTCTCCTCCTGTGCTG 61.484 60.000 0.00 0.00 0.00 4.41
3081 3105 1.152030 TTGGGTCTCCTCCTGTGCT 60.152 57.895 0.00 0.00 0.00 4.40
3082 3106 1.298014 CTTGGGTCTCCTCCTGTGC 59.702 63.158 0.00 0.00 0.00 4.57
3083 3107 1.986413 CCTTGGGTCTCCTCCTGTG 59.014 63.158 0.00 0.00 0.00 3.66
3084 3108 1.920835 GCCTTGGGTCTCCTCCTGT 60.921 63.158 0.00 0.00 0.00 4.00
3085 3109 1.908340 CTGCCTTGGGTCTCCTCCTG 61.908 65.000 0.00 0.00 0.00 3.86
3086 3110 1.614824 CTGCCTTGGGTCTCCTCCT 60.615 63.158 0.00 0.00 0.00 3.69
3087 3111 2.993853 CTGCCTTGGGTCTCCTCC 59.006 66.667 0.00 0.00 0.00 4.30
3088 3112 2.270527 GCTGCCTTGGGTCTCCTC 59.729 66.667 0.00 0.00 0.00 3.71
3089 3113 2.204059 AGCTGCCTTGGGTCTCCT 60.204 61.111 0.00 0.00 0.00 3.69
3090 3114 2.045536 CAGCTGCCTTGGGTCTCC 60.046 66.667 0.00 0.00 0.00 3.71
3091 3115 2.749441 GCAGCTGCCTTGGGTCTC 60.749 66.667 28.76 0.00 34.31 3.36
3092 3116 3.564345 CTGCAGCTGCCTTGGGTCT 62.564 63.158 34.64 0.00 41.18 3.85
3093 3117 3.060615 CTGCAGCTGCCTTGGGTC 61.061 66.667 34.64 6.50 41.18 4.46
3096 3120 3.749064 CTGCTGCAGCTGCCTTGG 61.749 66.667 36.61 21.79 42.66 3.61
3097 3121 3.749064 CCTGCTGCAGCTGCCTTG 61.749 66.667 36.61 24.27 42.66 3.61
3098 3122 3.921936 CTCCTGCTGCAGCTGCCTT 62.922 63.158 36.61 0.00 42.66 4.35
3099 3123 4.411981 CTCCTGCTGCAGCTGCCT 62.412 66.667 36.61 0.00 42.66 4.75
3100 3124 4.405671 TCTCCTGCTGCAGCTGCC 62.406 66.667 36.61 21.13 42.66 4.85
3101 3125 2.820479 CTCTCCTGCTGCAGCTGC 60.820 66.667 36.61 31.89 42.66 5.25
3102 3126 1.742140 CACTCTCCTGCTGCAGCTG 60.742 63.158 36.61 34.20 42.66 4.24
3103 3127 2.215625 ACACTCTCCTGCTGCAGCT 61.216 57.895 36.61 14.44 42.66 4.24
3104 3128 2.033755 CACACTCTCCTGCTGCAGC 61.034 63.158 31.89 31.89 42.50 5.25
3105 3129 2.033755 GCACACTCTCCTGCTGCAG 61.034 63.158 22.44 22.44 0.00 4.41
3106 3130 2.031616 GCACACTCTCCTGCTGCA 59.968 61.111 0.88 0.88 0.00 4.41
3107 3131 0.959372 ATTGCACACTCTCCTGCTGC 60.959 55.000 0.00 0.00 34.29 5.25
3108 3132 2.391616 TATTGCACACTCTCCTGCTG 57.608 50.000 0.00 0.00 34.29 4.41
3109 3133 3.641434 AATATTGCACACTCTCCTGCT 57.359 42.857 0.00 0.00 34.29 4.24
3110 3134 3.812053 CCTAATATTGCACACTCTCCTGC 59.188 47.826 0.00 0.00 0.00 4.85
3111 3135 5.163364 ACTCCTAATATTGCACACTCTCCTG 60.163 44.000 0.00 0.00 0.00 3.86
3112 3136 4.965532 ACTCCTAATATTGCACACTCTCCT 59.034 41.667 0.00 0.00 0.00 3.69
3113 3137 5.283457 ACTCCTAATATTGCACACTCTCC 57.717 43.478 0.00 0.00 0.00 3.71
3114 3138 5.163405 TGGACTCCTAATATTGCACACTCTC 60.163 44.000 0.00 0.00 0.00 3.20
3115 3139 4.716784 TGGACTCCTAATATTGCACACTCT 59.283 41.667 0.00 0.00 0.00 3.24
3116 3140 4.811557 GTGGACTCCTAATATTGCACACTC 59.188 45.833 0.00 0.00 31.20 3.51
3117 3141 4.471386 AGTGGACTCCTAATATTGCACACT 59.529 41.667 0.00 0.00 33.11 3.55
3118 3142 4.770795 AGTGGACTCCTAATATTGCACAC 58.229 43.478 0.00 0.00 33.11 3.82
3119 3143 6.554982 AGATAGTGGACTCCTAATATTGCACA 59.445 38.462 0.00 0.00 33.11 4.57
3120 3144 6.998802 AGATAGTGGACTCCTAATATTGCAC 58.001 40.000 0.00 0.00 0.00 4.57
3121 3145 7.950684 ACTAGATAGTGGACTCCTAATATTGCA 59.049 37.037 0.00 0.00 34.72 4.08
3122 3146 8.356000 ACTAGATAGTGGACTCCTAATATTGC 57.644 38.462 0.00 0.00 34.72 3.56
3129 3153 9.402786 TCCTAATAACTAGATAGTGGACTCCTA 57.597 37.037 0.00 0.00 36.50 2.94
3130 3154 8.290463 TCCTAATAACTAGATAGTGGACTCCT 57.710 38.462 0.00 0.00 36.50 3.69
3131 3155 8.937207 TTCCTAATAACTAGATAGTGGACTCC 57.063 38.462 0.00 0.00 36.50 3.85
3133 3157 9.710818 TGTTTCCTAATAACTAGATAGTGGACT 57.289 33.333 0.00 0.00 36.50 3.85
3134 3158 9.968870 CTGTTTCCTAATAACTAGATAGTGGAC 57.031 37.037 0.00 0.00 36.50 4.02
3135 3159 9.144298 CCTGTTTCCTAATAACTAGATAGTGGA 57.856 37.037 0.00 0.00 36.50 4.02
3136 3160 9.144298 TCCTGTTTCCTAATAACTAGATAGTGG 57.856 37.037 0.00 0.00 36.50 4.00
3141 3165 9.853177 CCAATTCCTGTTTCCTAATAACTAGAT 57.147 33.333 0.00 0.00 0.00 1.98
3142 3166 9.053472 TCCAATTCCTGTTTCCTAATAACTAGA 57.947 33.333 0.00 0.00 0.00 2.43
3143 3167 9.853177 ATCCAATTCCTGTTTCCTAATAACTAG 57.147 33.333 0.00 0.00 0.00 2.57
3147 3171 9.502091 CGATATCCAATTCCTGTTTCCTAATAA 57.498 33.333 0.00 0.00 0.00 1.40
3148 3172 8.876181 TCGATATCCAATTCCTGTTTCCTAATA 58.124 33.333 0.00 0.00 0.00 0.98
3149 3173 7.745717 TCGATATCCAATTCCTGTTTCCTAAT 58.254 34.615 0.00 0.00 0.00 1.73
3150 3174 7.131907 TCGATATCCAATTCCTGTTTCCTAA 57.868 36.000 0.00 0.00 0.00 2.69
3151 3175 6.740944 TCGATATCCAATTCCTGTTTCCTA 57.259 37.500 0.00 0.00 0.00 2.94
3152 3176 5.630415 TCGATATCCAATTCCTGTTTCCT 57.370 39.130 0.00 0.00 0.00 3.36
3153 3177 6.294176 CCATTCGATATCCAATTCCTGTTTCC 60.294 42.308 0.00 0.00 0.00 3.13
3154 3178 6.263168 ACCATTCGATATCCAATTCCTGTTTC 59.737 38.462 0.00 0.00 0.00 2.78
3155 3179 6.129179 ACCATTCGATATCCAATTCCTGTTT 58.871 36.000 0.00 0.00 0.00 2.83
3156 3180 5.694995 ACCATTCGATATCCAATTCCTGTT 58.305 37.500 0.00 0.00 0.00 3.16
3157 3181 5.310409 ACCATTCGATATCCAATTCCTGT 57.690 39.130 0.00 0.00 0.00 4.00
3158 3182 6.639632 AAACCATTCGATATCCAATTCCTG 57.360 37.500 0.00 0.00 0.00 3.86
3159 3183 6.607198 ACAAAACCATTCGATATCCAATTCCT 59.393 34.615 0.00 0.00 0.00 3.36
3160 3184 6.805713 ACAAAACCATTCGATATCCAATTCC 58.194 36.000 0.00 0.00 0.00 3.01
3161 3185 6.918022 GGACAAAACCATTCGATATCCAATTC 59.082 38.462 0.00 0.00 0.00 2.17
3162 3186 6.183360 GGGACAAAACCATTCGATATCCAATT 60.183 38.462 0.00 0.00 0.00 2.32
3163 3187 5.301805 GGGACAAAACCATTCGATATCCAAT 59.698 40.000 0.00 0.00 0.00 3.16
3164 3188 4.642885 GGGACAAAACCATTCGATATCCAA 59.357 41.667 0.00 0.00 0.00 3.53
3165 3189 4.204012 GGGACAAAACCATTCGATATCCA 58.796 43.478 0.00 0.00 0.00 3.41
3166 3190 4.204012 TGGGACAAAACCATTCGATATCC 58.796 43.478 0.00 0.00 31.92 2.59
3167 3191 5.278463 CCATGGGACAAAACCATTCGATATC 60.278 44.000 2.85 0.00 46.25 1.63
3168 3192 4.584325 CCATGGGACAAAACCATTCGATAT 59.416 41.667 2.85 0.00 46.25 1.63
3169 3193 3.951037 CCATGGGACAAAACCATTCGATA 59.049 43.478 2.85 0.00 46.25 2.92
3170 3194 2.760092 CCATGGGACAAAACCATTCGAT 59.240 45.455 2.85 0.00 46.25 3.59
3171 3195 2.166829 CCATGGGACAAAACCATTCGA 58.833 47.619 2.85 0.00 46.25 3.71
3172 3196 2.166829 TCCATGGGACAAAACCATTCG 58.833 47.619 13.02 0.00 46.25 3.34
3173 3197 3.055891 CCTTCCATGGGACAAAACCATTC 60.056 47.826 13.02 0.00 46.25 2.67
3174 3198 2.905736 CCTTCCATGGGACAAAACCATT 59.094 45.455 13.02 0.00 46.25 3.16
3195 3219 4.440112 CGGATTTGGAAATAGCAGGGAAAC 60.440 45.833 0.00 0.00 0.00 2.78
3196 3220 3.699038 CGGATTTGGAAATAGCAGGGAAA 59.301 43.478 0.00 0.00 0.00 3.13
3197 3221 3.287222 CGGATTTGGAAATAGCAGGGAA 58.713 45.455 0.00 0.00 0.00 3.97
3198 3222 2.241176 ACGGATTTGGAAATAGCAGGGA 59.759 45.455 0.00 0.00 0.00 4.20
3199 3223 2.654863 ACGGATTTGGAAATAGCAGGG 58.345 47.619 0.00 0.00 0.00 4.45
3200 3224 4.260620 CGTAACGGATTTGGAAATAGCAGG 60.261 45.833 0.00 0.00 0.00 4.85
3201 3225 4.569162 TCGTAACGGATTTGGAAATAGCAG 59.431 41.667 0.00 0.00 0.00 4.24
3202 3226 4.505808 TCGTAACGGATTTGGAAATAGCA 58.494 39.130 0.00 0.00 0.00 3.49
3203 3227 4.569564 ACTCGTAACGGATTTGGAAATAGC 59.430 41.667 0.00 0.00 0.00 2.97
3204 3228 6.657836 AACTCGTAACGGATTTGGAAATAG 57.342 37.500 0.00 0.00 0.00 1.73
3205 3229 6.427547 ACAAACTCGTAACGGATTTGGAAATA 59.572 34.615 13.82 0.00 36.86 1.40
3206 3230 5.239963 ACAAACTCGTAACGGATTTGGAAAT 59.760 36.000 13.82 0.00 36.86 2.17
3207 3231 4.575645 ACAAACTCGTAACGGATTTGGAAA 59.424 37.500 13.82 0.00 36.86 3.13
3208 3232 4.128643 ACAAACTCGTAACGGATTTGGAA 58.871 39.130 13.82 0.00 36.86 3.53
3209 3233 3.731089 ACAAACTCGTAACGGATTTGGA 58.269 40.909 13.82 0.00 36.86 3.53
3210 3234 4.477302 AACAAACTCGTAACGGATTTGG 57.523 40.909 13.82 1.36 36.86 3.28
3211 3235 5.740099 ACAAAACAAACTCGTAACGGATTTG 59.260 36.000 0.00 0.00 37.75 2.32
3212 3236 5.882553 ACAAAACAAACTCGTAACGGATTT 58.117 33.333 0.00 0.00 0.00 2.17
3213 3237 5.488645 ACAAAACAAACTCGTAACGGATT 57.511 34.783 0.00 0.00 0.00 3.01
3214 3238 5.488645 AACAAAACAAACTCGTAACGGAT 57.511 34.783 0.00 0.00 0.00 4.18
3215 3239 4.943142 AACAAAACAAACTCGTAACGGA 57.057 36.364 0.00 0.00 0.00 4.69
3216 3240 5.847515 GGATAACAAAACAAACTCGTAACGG 59.152 40.000 0.00 0.00 0.00 4.44
3217 3241 6.652245 AGGATAACAAAACAAACTCGTAACG 58.348 36.000 0.00 0.00 0.00 3.18
3218 3242 8.845942 AAAGGATAACAAAACAAACTCGTAAC 57.154 30.769 0.00 0.00 0.00 2.50
3219 3243 8.895737 AGAAAGGATAACAAAACAAACTCGTAA 58.104 29.630 0.00 0.00 0.00 3.18
3220 3244 8.441312 AGAAAGGATAACAAAACAAACTCGTA 57.559 30.769 0.00 0.00 0.00 3.43
3221 3245 7.329588 AGAAAGGATAACAAAACAAACTCGT 57.670 32.000 0.00 0.00 0.00 4.18
3222 3246 9.382244 CTAAGAAAGGATAACAAAACAAACTCG 57.618 33.333 0.00 0.00 0.00 4.18
3227 3251 9.629878 TGGTACTAAGAAAGGATAACAAAACAA 57.370 29.630 0.00 0.00 0.00 2.83
3228 3252 9.629878 TTGGTACTAAGAAAGGATAACAAAACA 57.370 29.630 0.00 0.00 0.00 2.83
3230 3254 9.856162 ACTTGGTACTAAGAAAGGATAACAAAA 57.144 29.630 24.08 0.00 0.00 2.44
3231 3255 9.856162 AACTTGGTACTAAGAAAGGATAACAAA 57.144 29.630 24.08 0.00 0.00 2.83
3232 3256 9.280174 CAACTTGGTACTAAGAAAGGATAACAA 57.720 33.333 24.08 0.00 0.00 2.83
3233 3257 8.434392 ACAACTTGGTACTAAGAAAGGATAACA 58.566 33.333 24.08 0.00 0.00 2.41
3234 3258 8.843885 ACAACTTGGTACTAAGAAAGGATAAC 57.156 34.615 24.08 0.00 0.00 1.89
3236 3260 9.933723 GTTACAACTTGGTACTAAGAAAGGATA 57.066 33.333 24.08 6.14 0.00 2.59
3237 3261 8.657712 AGTTACAACTTGGTACTAAGAAAGGAT 58.342 33.333 24.08 6.97 35.21 3.24
3238 3262 7.929785 CAGTTACAACTTGGTACTAAGAAAGGA 59.070 37.037 24.08 8.16 37.08 3.36
3239 3263 7.172703 CCAGTTACAACTTGGTACTAAGAAAGG 59.827 40.741 24.08 12.44 37.08 3.11
3240 3264 7.172703 CCCAGTTACAACTTGGTACTAAGAAAG 59.827 40.741 24.08 14.83 37.14 2.62
3241 3265 6.993902 CCCAGTTACAACTTGGTACTAAGAAA 59.006 38.462 24.08 10.32 37.14 2.52
3242 3266 6.527423 CCCAGTTACAACTTGGTACTAAGAA 58.473 40.000 24.08 6.38 37.14 2.52
3243 3267 5.511888 GCCCAGTTACAACTTGGTACTAAGA 60.512 44.000 24.08 0.04 42.28 2.10
3244 3268 4.694037 GCCCAGTTACAACTTGGTACTAAG 59.306 45.833 16.67 16.67 42.28 2.18
3245 3269 4.348754 AGCCCAGTTACAACTTGGTACTAA 59.651 41.667 12.39 0.00 42.28 2.24
3246 3270 3.905591 AGCCCAGTTACAACTTGGTACTA 59.094 43.478 12.39 0.00 42.28 1.82
3247 3271 2.709397 AGCCCAGTTACAACTTGGTACT 59.291 45.455 12.39 1.71 42.28 2.73
3248 3272 3.136009 AGCCCAGTTACAACTTGGTAC 57.864 47.619 12.39 0.00 42.28 3.34
3249 3273 6.157297 ACATATAGCCCAGTTACAACTTGGTA 59.843 38.462 12.39 7.94 42.28 3.25
3250 3274 5.045140 ACATATAGCCCAGTTACAACTTGGT 60.045 40.000 12.39 6.31 42.28 3.67
3251 3275 5.437060 ACATATAGCCCAGTTACAACTTGG 58.563 41.667 7.67 7.67 42.95 3.61
3252 3276 7.272978 ACTACATATAGCCCAGTTACAACTTG 58.727 38.462 0.00 0.00 32.12 3.16
3253 3277 7.344871 AGACTACATATAGCCCAGTTACAACTT 59.655 37.037 0.00 0.00 32.12 2.66
3254 3278 6.839657 AGACTACATATAGCCCAGTTACAACT 59.160 38.462 0.00 0.00 33.75 3.16
3255 3279 7.014422 AGAGACTACATATAGCCCAGTTACAAC 59.986 40.741 0.00 0.00 30.75 3.32
3256 3280 7.067421 AGAGACTACATATAGCCCAGTTACAA 58.933 38.462 0.00 0.00 30.75 2.41
3257 3281 6.611785 AGAGACTACATATAGCCCAGTTACA 58.388 40.000 0.00 0.00 30.75 2.41
3258 3282 7.884354 AGTAGAGACTACATATAGCCCAGTTAC 59.116 40.741 10.78 0.00 32.65 2.50
3259 3283 7.986704 AGTAGAGACTACATATAGCCCAGTTA 58.013 38.462 10.78 0.00 32.65 2.24
3260 3284 6.854578 AGTAGAGACTACATATAGCCCAGTT 58.145 40.000 10.78 0.00 32.65 3.16
3261 3285 6.457159 AGTAGAGACTACATATAGCCCAGT 57.543 41.667 10.78 0.00 32.65 4.00
3262 3286 7.626390 ACTAGTAGAGACTACATATAGCCCAG 58.374 42.308 3.59 0.00 37.10 4.45
3263 3287 7.571071 ACTAGTAGAGACTACATATAGCCCA 57.429 40.000 3.59 0.00 37.10 5.36
3264 3288 8.980596 TCTACTAGTAGAGACTACATATAGCCC 58.019 40.741 25.58 0.00 37.28 5.19
3279 3303 9.574516 TGCATGTCTTATTGATCTACTAGTAGA 57.425 33.333 29.96 29.96 45.24 2.59
3282 3306 8.918116 TCTTGCATGTCTTATTGATCTACTAGT 58.082 33.333 0.00 0.00 0.00 2.57
3283 3307 9.755804 TTCTTGCATGTCTTATTGATCTACTAG 57.244 33.333 0.00 0.00 0.00 2.57
3291 3315 9.187996 TGGAATTATTCTTGCATGTCTTATTGA 57.812 29.630 4.87 0.00 0.00 2.57
3292 3316 9.806203 TTGGAATTATTCTTGCATGTCTTATTG 57.194 29.630 4.87 0.00 0.00 1.90
3297 3321 9.584008 AGATATTGGAATTATTCTTGCATGTCT 57.416 29.630 4.87 3.32 0.00 3.41
3298 3322 9.837525 GAGATATTGGAATTATTCTTGCATGTC 57.162 33.333 4.87 1.42 0.00 3.06
3299 3323 8.800332 GGAGATATTGGAATTATTCTTGCATGT 58.200 33.333 4.87 0.00 0.00 3.21
3300 3324 9.021807 AGGAGATATTGGAATTATTCTTGCATG 57.978 33.333 4.87 0.00 0.00 4.06
3301 3325 9.240734 GAGGAGATATTGGAATTATTCTTGCAT 57.759 33.333 4.87 0.00 0.00 3.96
3302 3326 7.667219 GGAGGAGATATTGGAATTATTCTTGCA 59.333 37.037 4.87 0.00 0.00 4.08
3303 3327 7.121907 GGGAGGAGATATTGGAATTATTCTTGC 59.878 40.741 4.87 0.00 0.00 4.01
3304 3328 7.613411 GGGGAGGAGATATTGGAATTATTCTTG 59.387 40.741 4.87 0.00 0.00 3.02
3305 3329 7.522529 AGGGGAGGAGATATTGGAATTATTCTT 59.477 37.037 4.87 0.00 0.00 2.52
3306 3330 7.034454 AGGGGAGGAGATATTGGAATTATTCT 58.966 38.462 4.87 0.00 0.00 2.40
3307 3331 7.115414 CAGGGGAGGAGATATTGGAATTATTC 58.885 42.308 0.00 0.00 0.00 1.75
3308 3332 6.524891 GCAGGGGAGGAGATATTGGAATTATT 60.525 42.308 0.00 0.00 0.00 1.40
3309 3333 5.044550 GCAGGGGAGGAGATATTGGAATTAT 60.045 44.000 0.00 0.00 0.00 1.28
3310 3334 4.289672 GCAGGGGAGGAGATATTGGAATTA 59.710 45.833 0.00 0.00 0.00 1.40
3311 3335 3.075134 GCAGGGGAGGAGATATTGGAATT 59.925 47.826 0.00 0.00 0.00 2.17
3312 3336 2.646798 GCAGGGGAGGAGATATTGGAAT 59.353 50.000 0.00 0.00 0.00 3.01
3313 3337 2.057922 GCAGGGGAGGAGATATTGGAA 58.942 52.381 0.00 0.00 0.00 3.53
3314 3338 1.224120 AGCAGGGGAGGAGATATTGGA 59.776 52.381 0.00 0.00 0.00 3.53
3315 3339 1.739750 AGCAGGGGAGGAGATATTGG 58.260 55.000 0.00 0.00 0.00 3.16
3316 3340 4.161942 CAGATAGCAGGGGAGGAGATATTG 59.838 50.000 0.00 0.00 0.00 1.90
3317 3341 4.360889 CAGATAGCAGGGGAGGAGATATT 58.639 47.826 0.00 0.00 0.00 1.28
3318 3342 3.885333 GCAGATAGCAGGGGAGGAGATAT 60.885 52.174 0.00 0.00 44.79 1.63
3319 3343 2.558575 GCAGATAGCAGGGGAGGAGATA 60.559 54.545 0.00 0.00 44.79 1.98
3320 3344 1.830883 GCAGATAGCAGGGGAGGAGAT 60.831 57.143 0.00 0.00 44.79 2.75
3321 3345 0.470833 GCAGATAGCAGGGGAGGAGA 60.471 60.000 0.00 0.00 44.79 3.71
3322 3346 1.814772 CGCAGATAGCAGGGGAGGAG 61.815 65.000 0.00 0.00 46.13 3.69
3323 3347 1.834378 CGCAGATAGCAGGGGAGGA 60.834 63.158 0.00 0.00 46.13 3.71
3324 3348 2.739784 CGCAGATAGCAGGGGAGG 59.260 66.667 0.00 0.00 46.13 4.30
3325 3349 2.030262 GCGCAGATAGCAGGGGAG 59.970 66.667 0.30 0.00 46.13 4.30
3326 3350 3.550431 GGCGCAGATAGCAGGGGA 61.550 66.667 10.83 0.00 46.13 4.81
3327 3351 3.112205 AAGGCGCAGATAGCAGGGG 62.112 63.158 10.83 0.00 46.13 4.79
3328 3352 1.890979 CAAGGCGCAGATAGCAGGG 60.891 63.158 10.83 0.00 46.13 4.45
3329 3353 2.541120 GCAAGGCGCAGATAGCAGG 61.541 63.158 10.83 0.00 46.13 4.85
3330 3354 3.020627 GCAAGGCGCAGATAGCAG 58.979 61.111 10.83 0.00 46.13 4.24
3340 3364 4.785453 GAGAGGGGGTGCAAGGCG 62.785 72.222 0.00 0.00 0.00 5.52
3341 3365 3.334054 AGAGAGGGGGTGCAAGGC 61.334 66.667 0.00 0.00 0.00 4.35
3342 3366 2.674220 GGAGAGAGGGGGTGCAAGG 61.674 68.421 0.00 0.00 0.00 3.61
3343 3367 2.674220 GGGAGAGAGGGGGTGCAAG 61.674 68.421 0.00 0.00 0.00 4.01
3344 3368 2.610859 GGGAGAGAGGGGGTGCAA 60.611 66.667 0.00 0.00 0.00 4.08
3345 3369 4.741239 GGGGAGAGAGGGGGTGCA 62.741 72.222 0.00 0.00 0.00 4.57
3346 3370 4.423209 AGGGGAGAGAGGGGGTGC 62.423 72.222 0.00 0.00 0.00 5.01
3347 3371 1.297409 TAGAGGGGAGAGAGGGGGTG 61.297 65.000 0.00 0.00 0.00 4.61
3348 3372 1.002242 CTAGAGGGGAGAGAGGGGGT 61.002 65.000 0.00 0.00 0.00 4.95
3349 3373 0.703056 TCTAGAGGGGAGAGAGGGGG 60.703 65.000 0.00 0.00 0.00 5.40
3350 3374 0.481128 GTCTAGAGGGGAGAGAGGGG 59.519 65.000 0.00 0.00 0.00 4.79
3351 3375 1.144913 CTGTCTAGAGGGGAGAGAGGG 59.855 61.905 0.00 0.00 32.13 4.30
3352 3376 1.478654 GCTGTCTAGAGGGGAGAGAGG 60.479 61.905 0.00 0.00 35.41 3.69
3353 3377 1.478654 GGCTGTCTAGAGGGGAGAGAG 60.479 61.905 0.00 0.00 37.38 3.20
3354 3378 0.553819 GGCTGTCTAGAGGGGAGAGA 59.446 60.000 0.00 0.00 0.00 3.10
3355 3379 0.260230 TGGCTGTCTAGAGGGGAGAG 59.740 60.000 0.00 0.00 0.00 3.20
3356 3380 0.937441 ATGGCTGTCTAGAGGGGAGA 59.063 55.000 0.00 0.00 0.00 3.71
3357 3381 1.047002 CATGGCTGTCTAGAGGGGAG 58.953 60.000 0.00 0.00 0.00 4.30
3358 3382 0.399091 CCATGGCTGTCTAGAGGGGA 60.399 60.000 0.00 0.00 0.00 4.81
3359 3383 1.414061 CCCATGGCTGTCTAGAGGGG 61.414 65.000 6.09 0.00 0.00 4.79
3360 3384 0.692419 ACCCATGGCTGTCTAGAGGG 60.692 60.000 6.09 8.98 40.66 4.30
3361 3385 2.088104 TACCCATGGCTGTCTAGAGG 57.912 55.000 6.09 0.00 0.00 3.69
3362 3386 3.738281 CGTTTACCCATGGCTGTCTAGAG 60.738 52.174 6.09 0.00 0.00 2.43
3363 3387 2.167693 CGTTTACCCATGGCTGTCTAGA 59.832 50.000 6.09 0.00 0.00 2.43
3364 3388 2.167693 TCGTTTACCCATGGCTGTCTAG 59.832 50.000 6.09 0.00 0.00 2.43
3365 3389 2.167693 CTCGTTTACCCATGGCTGTCTA 59.832 50.000 6.09 0.00 0.00 2.59
3366 3390 0.981183 TCGTTTACCCATGGCTGTCT 59.019 50.000 6.09 0.00 0.00 3.41
3367 3391 1.369625 CTCGTTTACCCATGGCTGTC 58.630 55.000 6.09 0.00 0.00 3.51
3368 3392 0.035439 CCTCGTTTACCCATGGCTGT 60.035 55.000 6.09 2.04 0.00 4.40
3369 3393 0.251916 TCCTCGTTTACCCATGGCTG 59.748 55.000 6.09 0.00 0.00 4.85
3370 3394 0.541863 CTCCTCGTTTACCCATGGCT 59.458 55.000 6.09 0.00 0.00 4.75
3371 3395 0.463833 CCTCCTCGTTTACCCATGGC 60.464 60.000 6.09 0.00 0.00 4.40
3372 3396 0.463833 GCCTCCTCGTTTACCCATGG 60.464 60.000 4.14 4.14 0.00 3.66
3373 3397 0.463833 GGCCTCCTCGTTTACCCATG 60.464 60.000 0.00 0.00 0.00 3.66
3374 3398 0.912487 TGGCCTCCTCGTTTACCCAT 60.912 55.000 3.32 0.00 0.00 4.00
3375 3399 1.536907 TGGCCTCCTCGTTTACCCA 60.537 57.895 3.32 0.00 0.00 4.51
3376 3400 1.221021 CTGGCCTCCTCGTTTACCC 59.779 63.158 3.32 0.00 0.00 3.69
3377 3401 1.449778 GCTGGCCTCCTCGTTTACC 60.450 63.158 3.32 0.00 0.00 2.85
3378 3402 1.449778 GGCTGGCCTCCTCGTTTAC 60.450 63.158 3.32 0.00 0.00 2.01
3379 3403 1.612442 AGGCTGGCCTCCTCGTTTA 60.612 57.895 8.50 0.00 44.43 2.01
3380 3404 2.930562 AGGCTGGCCTCCTCGTTT 60.931 61.111 8.50 0.00 44.43 3.60
3390 3414 3.798511 GTAGGGGGTGAGGCTGGC 61.799 72.222 0.00 0.00 0.00 4.85
3391 3415 3.090532 GGTAGGGGGTGAGGCTGG 61.091 72.222 0.00 0.00 0.00 4.85
3392 3416 2.285368 TGGTAGGGGGTGAGGCTG 60.285 66.667 0.00 0.00 0.00 4.85
3393 3417 2.041265 CTGGTAGGGGGTGAGGCT 59.959 66.667 0.00 0.00 0.00 4.58
3394 3418 3.798511 GCTGGTAGGGGGTGAGGC 61.799 72.222 0.00 0.00 0.00 4.70
3395 3419 3.090532 GGCTGGTAGGGGGTGAGG 61.091 72.222 0.00 0.00 0.00 3.86
3396 3420 1.694169 ATGGCTGGTAGGGGGTGAG 60.694 63.158 0.00 0.00 0.00 3.51
3397 3421 2.000701 CATGGCTGGTAGGGGGTGA 61.001 63.158 0.00 0.00 0.00 4.02
3398 3422 1.355718 ATCATGGCTGGTAGGGGGTG 61.356 60.000 0.00 0.00 0.00 4.61
3399 3423 1.006092 ATCATGGCTGGTAGGGGGT 59.994 57.895 0.00 0.00 0.00 4.95
3400 3424 1.061905 TGATCATGGCTGGTAGGGGG 61.062 60.000 0.00 0.00 0.00 5.40
3401 3425 1.070604 ATGATCATGGCTGGTAGGGG 58.929 55.000 7.59 0.00 0.00 4.79
3402 3426 3.560025 GGTTATGATCATGGCTGGTAGGG 60.560 52.174 18.72 0.00 0.00 3.53
3403 3427 3.328931 AGGTTATGATCATGGCTGGTAGG 59.671 47.826 18.72 0.00 0.00 3.18
3404 3428 4.321718 CAGGTTATGATCATGGCTGGTAG 58.678 47.826 18.72 0.00 0.00 3.18
3405 3429 3.496692 GCAGGTTATGATCATGGCTGGTA 60.497 47.826 18.72 0.00 0.00 3.25
3406 3430 2.750807 GCAGGTTATGATCATGGCTGGT 60.751 50.000 18.72 0.00 0.00 4.00
3407 3431 1.884579 GCAGGTTATGATCATGGCTGG 59.115 52.381 18.72 6.33 0.00 4.85
3408 3432 1.534163 CGCAGGTTATGATCATGGCTG 59.466 52.381 18.72 10.84 0.00 4.85
3409 3433 1.888215 CGCAGGTTATGATCATGGCT 58.112 50.000 18.72 0.00 0.00 4.75
3410 3434 0.239347 GCGCAGGTTATGATCATGGC 59.761 55.000 18.72 12.02 0.00 4.40
3411 3435 1.534163 CAGCGCAGGTTATGATCATGG 59.466 52.381 18.72 3.97 33.74 3.66
3412 3436 1.069432 GCAGCGCAGGTTATGATCATG 60.069 52.381 18.72 3.57 33.74 3.07
3413 3437 1.202734 AGCAGCGCAGGTTATGATCAT 60.203 47.619 13.81 13.81 33.74 2.45
3414 3438 0.178767 AGCAGCGCAGGTTATGATCA 59.821 50.000 11.47 0.00 33.74 2.92
3415 3439 1.795286 GTAGCAGCGCAGGTTATGATC 59.205 52.381 10.48 0.00 33.74 2.92
3416 3440 1.541233 GGTAGCAGCGCAGGTTATGAT 60.541 52.381 10.48 0.00 33.74 2.45
3417 3441 0.179084 GGTAGCAGCGCAGGTTATGA 60.179 55.000 10.48 0.00 33.74 2.15
3418 3442 1.160329 GGGTAGCAGCGCAGGTTATG 61.160 60.000 10.48 0.00 33.74 1.90
3419 3443 1.146263 GGGTAGCAGCGCAGGTTAT 59.854 57.895 10.48 0.00 33.74 1.89
3420 3444 0.685131 TAGGGTAGCAGCGCAGGTTA 60.685 55.000 10.48 0.17 33.74 2.85
3421 3445 1.550130 TTAGGGTAGCAGCGCAGGTT 61.550 55.000 10.48 1.27 33.74 3.50
3422 3446 1.550130 TTTAGGGTAGCAGCGCAGGT 61.550 55.000 11.47 10.67 41.48 4.00
3423 3447 1.090052 GTTTAGGGTAGCAGCGCAGG 61.090 60.000 11.47 1.51 0.00 4.85
3424 3448 1.090052 GGTTTAGGGTAGCAGCGCAG 61.090 60.000 11.47 1.31 0.00 5.18
3425 3449 1.078708 GGTTTAGGGTAGCAGCGCA 60.079 57.895 11.47 0.00 0.00 6.09
3426 3450 2.171725 CGGTTTAGGGTAGCAGCGC 61.172 63.158 0.00 0.00 0.00 5.92
3427 3451 0.390735 AACGGTTTAGGGTAGCAGCG 60.391 55.000 0.00 0.00 36.25 5.18
3428 3452 1.366679 GAACGGTTTAGGGTAGCAGC 58.633 55.000 0.00 0.00 0.00 5.25
3429 3453 1.406477 GGGAACGGTTTAGGGTAGCAG 60.406 57.143 0.00 0.00 0.00 4.24
3430 3454 0.614812 GGGAACGGTTTAGGGTAGCA 59.385 55.000 0.00 0.00 0.00 3.49
3431 3455 0.107508 GGGGAACGGTTTAGGGTAGC 60.108 60.000 0.00 0.00 0.00 3.58
3432 3456 0.543277 GGGGGAACGGTTTAGGGTAG 59.457 60.000 0.00 0.00 0.00 3.18
3433 3457 2.695561 GGGGGAACGGTTTAGGGTA 58.304 57.895 0.00 0.00 0.00 3.69
3434 3458 3.499406 GGGGGAACGGTTTAGGGT 58.501 61.111 0.00 0.00 0.00 4.34
3448 3472 4.435970 GGGGCGTAAAGGTGGGGG 62.436 72.222 0.00 0.00 0.00 5.40
3449 3473 3.653078 TGGGGCGTAAAGGTGGGG 61.653 66.667 0.00 0.00 0.00 4.96
3450 3474 2.360726 GTGGGGCGTAAAGGTGGG 60.361 66.667 0.00 0.00 0.00 4.61
3451 3475 1.674322 CTGTGGGGCGTAAAGGTGG 60.674 63.158 0.00 0.00 0.00 4.61
3452 3476 2.332654 GCTGTGGGGCGTAAAGGTG 61.333 63.158 0.00 0.00 0.00 4.00
3453 3477 2.033602 GCTGTGGGGCGTAAAGGT 59.966 61.111 0.00 0.00 0.00 3.50
3454 3478 2.750237 GGCTGTGGGGCGTAAAGG 60.750 66.667 0.00 0.00 0.00 3.11
3455 3479 2.750237 GGGCTGTGGGGCGTAAAG 60.750 66.667 0.00 0.00 41.87 1.85
3456 3480 2.913117 ATGGGCTGTGGGGCGTAAA 61.913 57.895 0.00 0.00 41.87 2.01
3457 3481 3.334891 ATGGGCTGTGGGGCGTAA 61.335 61.111 0.00 0.00 41.87 3.18
3458 3482 4.108299 CATGGGCTGTGGGGCGTA 62.108 66.667 0.00 0.00 41.87 4.42
3461 3485 3.760261 TATTGTCATGGGCTGTGGGGC 62.760 57.143 0.00 0.00 40.05 5.80
3462 3486 0.258484 TATTGTCATGGGCTGTGGGG 59.742 55.000 0.00 0.00 0.00 4.96
3463 3487 1.683943 CTATTGTCATGGGCTGTGGG 58.316 55.000 0.00 0.00 0.00 4.61
3464 3488 1.683943 CCTATTGTCATGGGCTGTGG 58.316 55.000 0.00 0.00 0.00 4.17
3465 3489 1.683943 CCCTATTGTCATGGGCTGTG 58.316 55.000 0.00 0.00 33.88 3.66
3466 3490 0.552848 CCCCTATTGTCATGGGCTGT 59.447 55.000 0.00 0.00 39.61 4.40
3467 3491 0.846015 TCCCCTATTGTCATGGGCTG 59.154 55.000 0.00 0.00 39.61 4.85
3468 3492 1.143813 CTCCCCTATTGTCATGGGCT 58.856 55.000 0.00 0.00 39.61 5.19
3469 3493 0.538287 GCTCCCCTATTGTCATGGGC 60.538 60.000 0.00 0.00 39.61 5.36
3470 3494 0.846015 TGCTCCCCTATTGTCATGGG 59.154 55.000 0.00 0.00 40.59 4.00
3471 3495 2.511659 CATGCTCCCCTATTGTCATGG 58.488 52.381 0.00 0.00 0.00 3.66
3472 3496 2.107031 TCCATGCTCCCCTATTGTCATG 59.893 50.000 0.00 0.00 0.00 3.07
3473 3497 2.374504 CTCCATGCTCCCCTATTGTCAT 59.625 50.000 0.00 0.00 0.00 3.06
3474 3498 1.770658 CTCCATGCTCCCCTATTGTCA 59.229 52.381 0.00 0.00 0.00 3.58
3475 3499 1.544314 GCTCCATGCTCCCCTATTGTC 60.544 57.143 0.00 0.00 38.95 3.18
3476 3500 0.475906 GCTCCATGCTCCCCTATTGT 59.524 55.000 0.00 0.00 38.95 2.71
3477 3501 0.475475 TGCTCCATGCTCCCCTATTG 59.525 55.000 0.00 0.00 43.37 1.90
3478 3502 0.769873 CTGCTCCATGCTCCCCTATT 59.230 55.000 0.00 0.00 43.37 1.73
3481 3505 1.210204 TTTCTGCTCCATGCTCCCCT 61.210 55.000 0.00 0.00 43.37 4.79
3487 3511 1.666054 CCTCTCTTTCTGCTCCATGC 58.334 55.000 0.00 0.00 43.25 4.06
3505 3529 5.091261 TCTGAATTTCTCTAGTTGAGGCC 57.909 43.478 0.00 0.00 42.86 5.19
3508 3532 8.279103 GTGTTGTTCTGAATTTCTCTAGTTGAG 58.721 37.037 0.00 0.00 43.96 3.02
3509 3533 7.987458 AGTGTTGTTCTGAATTTCTCTAGTTGA 59.013 33.333 0.00 0.00 0.00 3.18
3511 3535 7.987458 TCAGTGTTGTTCTGAATTTCTCTAGTT 59.013 33.333 0.00 0.00 38.71 2.24
3530 3554 5.825679 TGTACCTGCTTGTTTATTCAGTGTT 59.174 36.000 0.00 0.00 0.00 3.32
3531 3555 5.373222 TGTACCTGCTTGTTTATTCAGTGT 58.627 37.500 0.00 0.00 0.00 3.55
3533 3557 6.770785 TCTTTGTACCTGCTTGTTTATTCAGT 59.229 34.615 0.00 0.00 0.00 3.41
3534 3558 7.078228 GTCTTTGTACCTGCTTGTTTATTCAG 58.922 38.462 0.00 0.00 0.00 3.02
3548 3572 5.435686 TGCAGGATTATGTCTTTGTACCT 57.564 39.130 0.00 0.00 0.00 3.08
3549 3573 7.801716 TTATGCAGGATTATGTCTTTGTACC 57.198 36.000 0.00 0.00 0.00 3.34
3631 4283 6.835488 ACCATGGTTCTGCATTTACTTGATAT 59.165 34.615 13.00 0.00 0.00 1.63
3638 4290 4.485163 GAACACCATGGTTCTGCATTTAC 58.515 43.478 16.84 0.00 42.98 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.