Multiple sequence alignment - TraesCS2B01G538700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G538700 chr2B 100.000 4785 0 0 1 4785 733974388 733969604 0.000000e+00 8837.0
1 TraesCS2B01G538700 chr2B 90.241 871 58 13 2739 3607 733859895 733859050 0.000000e+00 1112.0
2 TraesCS2B01G538700 chr2B 88.793 928 74 13 2739 3665 733890934 733890036 0.000000e+00 1110.0
3 TraesCS2B01G538700 chr2B 85.364 1059 113 23 2614 3665 734049573 734048550 0.000000e+00 1059.0
4 TraesCS2B01G538700 chr2B 82.857 1190 94 45 953 2106 733863024 733861909 0.000000e+00 966.0
5 TraesCS2B01G538700 chr2B 83.957 829 66 33 918 1727 733892433 733891653 0.000000e+00 732.0
6 TraesCS2B01G538700 chr2B 93.857 407 25 0 1134 1540 734050917 734050511 8.800000e-172 614.0
7 TraesCS2B01G538700 chr2B 90.385 260 7 1 411 652 733892948 733892689 4.620000e-85 326.0
8 TraesCS2B01G538700 chr2B 81.074 391 45 14 435 801 733863512 733863127 7.840000e-73 285.0
9 TraesCS2B01G538700 chr2B 76.440 382 37 25 2331 2686 733891303 733890949 1.780000e-34 158.0
10 TraesCS2B01G538700 chr2B 77.444 266 40 11 1778 2034 733891649 733891395 1.800000e-29 141.0
11 TraesCS2B01G538700 chr2B 100.000 33 0 0 2654 2686 733859942 733859910 1.440000e-05 62.1
12 TraesCS2B01G538700 chr2D 88.146 1510 109 32 2192 3665 603401906 603400431 0.000000e+00 1733.0
13 TraesCS2B01G538700 chr2D 90.690 870 58 10 2739 3606 603542545 603543393 0.000000e+00 1136.0
14 TraesCS2B01G538700 chr2D 84.987 1159 82 50 954 2080 603381222 603380124 0.000000e+00 1092.0
15 TraesCS2B01G538700 chr2D 90.897 758 57 6 2857 3602 603379524 603378767 0.000000e+00 1007.0
16 TraesCS2B01G538700 chr2D 87.646 858 66 23 879 1719 603403208 603402374 0.000000e+00 961.0
17 TraesCS2B01G538700 chr2D 90.843 688 59 1 2978 3665 603501268 603500585 0.000000e+00 918.0
18 TraesCS2B01G538700 chr2D 87.758 776 65 14 957 1713 603540936 603541700 0.000000e+00 880.0
19 TraesCS2B01G538700 chr2D 81.303 353 27 11 411 730 603540241 603540587 2.860000e-62 250.0
20 TraesCS2B01G538700 chr2D 78.353 425 42 21 326 730 603404122 603403728 3.720000e-56 230.0
21 TraesCS2B01G538700 chr2D 76.850 419 32 40 2350 2721 603379997 603379597 4.920000e-40 176.0
22 TraesCS2B01G538700 chr2D 76.115 314 40 23 1771 2080 603541714 603541996 1.080000e-26 132.0
23 TraesCS2B01G538700 chr2D 84.677 124 4 9 2350 2459 603542123 603542245 5.060000e-20 110.0
24 TraesCS2B01G538700 chr2D 100.000 34 0 0 729 762 603403673 603403640 4.000000e-06 63.9
25 TraesCS2B01G538700 chr2D 85.714 56 6 1 879 934 603381261 603381208 1.860000e-04 58.4
26 TraesCS2B01G538700 chr2A 87.794 1147 84 22 2469 3603 735601464 735600362 0.000000e+00 1291.0
27 TraesCS2B01G538700 chr2A 92.440 873 56 5 2744 3606 735762891 735763763 0.000000e+00 1238.0
28 TraesCS2B01G538700 chr2A 97.984 645 13 0 4141 4785 528440439 528441083 0.000000e+00 1120.0
29 TraesCS2B01G538700 chr2A 84.978 912 79 29 995 1863 735761298 735762194 0.000000e+00 872.0
30 TraesCS2B01G538700 chr2A 84.211 931 87 33 835 1739 735603178 735602282 0.000000e+00 850.0
31 TraesCS2B01G538700 chr2A 93.321 524 30 5 3674 4195 528440038 528440558 0.000000e+00 769.0
32 TraesCS2B01G538700 chr2A 92.740 427 29 2 1131 1556 735703437 735703012 2.450000e-172 616.0
33 TraesCS2B01G538700 chr2A 86.505 289 18 10 2192 2468 735601771 735601492 1.010000e-76 298.0
34 TraesCS2B01G538700 chr2A 78.738 301 37 6 430 707 735603807 735603511 4.920000e-40 176.0
35 TraesCS2B01G538700 chr2A 86.525 141 7 9 2328 2459 735762487 735762624 1.390000e-30 145.0
36 TraesCS2B01G538700 chr2A 75.931 349 39 13 411 728 735760575 735760909 2.320000e-28 137.0
37 TraesCS2B01G538700 chr2A 81.600 125 15 3 1907 2030 735762289 735762406 3.940000e-16 97.1
38 TraesCS2B01G538700 chr6B 91.311 633 51 4 4154 4785 182643915 182644544 0.000000e+00 861.0
39 TraesCS2B01G538700 chr6B 88.766 543 53 4 3671 4207 182643472 182644012 0.000000e+00 658.0
40 TraesCS2B01G538700 chr7B 85.524 601 69 11 4176 4770 242984821 242985409 3.170000e-171 612.0
41 TraesCS2B01G538700 chr7B 85.591 347 45 5 3803 4146 242984513 242984857 4.550000e-95 359.0
42 TraesCS2B01G538700 chr7D 81.818 242 44 0 1 242 461391977 461392218 2.260000e-48 204.0
43 TraesCS2B01G538700 chr5B 78.947 247 47 4 1 244 633746660 633746904 3.830000e-36 163.0
44 TraesCS2B01G538700 chr5B 93.478 46 3 0 3672 3717 664892364 664892319 8.590000e-08 69.4
45 TraesCS2B01G538700 chr3B 78.541 233 42 8 11 240 802691175 802690948 3.860000e-31 147.0
46 TraesCS2B01G538700 chr3B 95.122 41 2 0 3677 3717 760412339 760412299 1.110000e-06 65.8
47 TraesCS2B01G538700 chr4B 78.836 189 37 3 11 197 535347294 535347107 1.810000e-24 124.0
48 TraesCS2B01G538700 chr1B 97.561 41 1 0 3677 3717 67034227 67034187 2.390000e-08 71.3
49 TraesCS2B01G538700 chr1B 95.455 44 2 0 3674 3717 629754432 629754475 2.390000e-08 71.3
50 TraesCS2B01G538700 chr6D 100.000 29 0 0 4088 4116 25779707 25779735 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G538700 chr2B 733969604 733974388 4784 True 8837.000 8837 100.00000 1 4785 1 chr2B.!!$R1 4784
1 TraesCS2B01G538700 chr2B 734048550 734050917 2367 True 836.500 1059 89.61050 1134 3665 2 chr2B.!!$R4 2531
2 TraesCS2B01G538700 chr2B 733859050 733863512 4462 True 606.275 1112 88.54300 435 3607 4 chr2B.!!$R2 3172
3 TraesCS2B01G538700 chr2B 733890036 733892948 2912 True 493.400 1110 83.40380 411 3665 5 chr2B.!!$R3 3254
4 TraesCS2B01G538700 chr2D 603500585 603501268 683 True 918.000 918 90.84300 2978 3665 1 chr2D.!!$R1 687
5 TraesCS2B01G538700 chr2D 603400431 603404122 3691 True 746.975 1733 88.53625 326 3665 4 chr2D.!!$R3 3339
6 TraesCS2B01G538700 chr2D 603378767 603381261 2494 True 583.350 1092 84.61200 879 3602 4 chr2D.!!$R2 2723
7 TraesCS2B01G538700 chr2D 603540241 603543393 3152 False 501.600 1136 84.10860 411 3606 5 chr2D.!!$F1 3195
8 TraesCS2B01G538700 chr2A 528440038 528441083 1045 False 944.500 1120 95.65250 3674 4785 2 chr2A.!!$F1 1111
9 TraesCS2B01G538700 chr2A 735600362 735603807 3445 True 653.750 1291 84.31200 430 3603 4 chr2A.!!$R2 3173
10 TraesCS2B01G538700 chr2A 735760575 735763763 3188 False 497.820 1238 84.29480 411 3606 5 chr2A.!!$F2 3195
11 TraesCS2B01G538700 chr6B 182643472 182644544 1072 False 759.500 861 90.03850 3671 4785 2 chr6B.!!$F1 1114
12 TraesCS2B01G538700 chr7B 242984513 242985409 896 False 485.500 612 85.55750 3803 4770 2 chr7B.!!$F1 967

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
145 146 0.027586 GACAAAAAGCAGACGCGTGT 59.972 50.0 20.7 11.1 45.49 4.49 F
317 318 0.110192 GTTTGTGCGGTCTAGCTTGC 60.110 55.0 0.0 0.0 38.13 4.01 F
1617 2584 0.108396 AATGCACCCCAAAAACTGCC 59.892 50.0 0.0 0.0 0.00 4.85 F
2135 3405 0.168128 GGTTTGGTAGTCATGTGCGC 59.832 55.0 0.0 0.0 0.00 6.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1102 2022 0.323629 GGTGTGTTGCTAGGTGGCTA 59.676 55.000 0.00 0.0 0.00 3.93 R
2119 3389 1.005512 ACGCGCACATGACTACCAA 60.006 52.632 5.73 0.0 0.00 3.67 R
3608 6741 0.106469 ACTCATCTCCGGCTGAGCTA 60.106 55.000 21.36 0.0 42.12 3.32 R
4122 7257 0.670854 GTTGCAACTCCTCCGTCCTC 60.671 60.000 22.36 0.0 0.00 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.271250 AGGATGACCAATGTGCCAC 57.729 52.632 0.00 0.00 38.94 5.01
19 20 0.323725 AGGATGACCAATGTGCCACC 60.324 55.000 0.00 0.00 38.94 4.61
20 21 0.611618 GGATGACCAATGTGCCACCA 60.612 55.000 0.00 0.00 35.97 4.17
21 22 1.255882 GATGACCAATGTGCCACCAA 58.744 50.000 0.00 0.00 0.00 3.67
22 23 0.968405 ATGACCAATGTGCCACCAAC 59.032 50.000 0.00 0.00 0.00 3.77
23 24 0.106268 TGACCAATGTGCCACCAACT 60.106 50.000 0.00 0.00 0.00 3.16
24 25 1.143889 TGACCAATGTGCCACCAACTA 59.856 47.619 0.00 0.00 0.00 2.24
25 26 1.812571 GACCAATGTGCCACCAACTAG 59.187 52.381 0.00 0.00 0.00 2.57
26 27 0.527565 CCAATGTGCCACCAACTAGC 59.472 55.000 0.00 0.00 0.00 3.42
27 28 0.168788 CAATGTGCCACCAACTAGCG 59.831 55.000 0.00 0.00 0.00 4.26
28 29 0.960364 AATGTGCCACCAACTAGCGG 60.960 55.000 0.00 0.00 0.00 5.52
29 30 2.746277 GTGCCACCAACTAGCGGG 60.746 66.667 3.96 1.49 0.00 6.13
30 31 4.028490 TGCCACCAACTAGCGGGG 62.028 66.667 5.37 0.00 0.00 5.73
35 36 4.530857 CCAACTAGCGGGGCGGAG 62.531 72.222 0.00 0.00 0.00 4.63
36 37 4.530857 CAACTAGCGGGGCGGAGG 62.531 72.222 0.00 0.00 0.00 4.30
68 69 4.696172 CGTGCGCGTGTCCGTTTC 62.696 66.667 12.43 0.00 36.15 2.78
69 70 3.632107 GTGCGCGTGTCCGTTTCA 61.632 61.111 8.43 0.00 36.15 2.69
70 71 2.663520 TGCGCGTGTCCGTTTCAT 60.664 55.556 8.43 0.00 36.15 2.57
71 72 2.202171 GCGCGTGTCCGTTTCATG 60.202 61.111 8.43 0.00 36.15 3.07
72 73 2.950172 GCGCGTGTCCGTTTCATGT 61.950 57.895 8.43 0.00 36.15 3.21
73 74 1.129809 CGCGTGTCCGTTTCATGTC 59.870 57.895 0.00 0.00 36.15 3.06
74 75 1.495951 GCGTGTCCGTTTCATGTCC 59.504 57.895 0.00 0.00 36.15 4.02
75 76 1.779061 CGTGTCCGTTTCATGTCCG 59.221 57.895 0.00 0.00 0.00 4.79
76 77 0.942410 CGTGTCCGTTTCATGTCCGT 60.942 55.000 0.00 0.00 0.00 4.69
77 78 0.511221 GTGTCCGTTTCATGTCCGTG 59.489 55.000 0.00 0.00 0.00 4.94
78 79 1.225376 TGTCCGTTTCATGTCCGTGC 61.225 55.000 0.00 0.00 0.00 5.34
79 80 1.669760 TCCGTTTCATGTCCGTGCC 60.670 57.895 0.00 0.00 0.00 5.01
80 81 2.474266 CGTTTCATGTCCGTGCCG 59.526 61.111 0.00 0.00 0.00 5.69
81 82 2.024868 CGTTTCATGTCCGTGCCGA 61.025 57.895 0.00 0.00 0.00 5.54
82 83 1.495951 GTTTCATGTCCGTGCCGAC 59.504 57.895 0.00 0.00 0.00 4.79
83 84 2.024868 TTTCATGTCCGTGCCGACG 61.025 57.895 0.00 0.00 45.67 5.12
93 94 2.740826 TGCCGACGCAAACTAGCC 60.741 61.111 0.00 0.00 43.74 3.93
94 95 2.434359 GCCGACGCAAACTAGCCT 60.434 61.111 0.00 0.00 34.03 4.58
95 96 2.033194 GCCGACGCAAACTAGCCTT 61.033 57.895 0.00 0.00 34.03 4.35
96 97 0.738412 GCCGACGCAAACTAGCCTTA 60.738 55.000 0.00 0.00 34.03 2.69
97 98 1.717194 CCGACGCAAACTAGCCTTAA 58.283 50.000 0.00 0.00 0.00 1.85
98 99 2.070783 CCGACGCAAACTAGCCTTAAA 58.929 47.619 0.00 0.00 0.00 1.52
99 100 2.481185 CCGACGCAAACTAGCCTTAAAA 59.519 45.455 0.00 0.00 0.00 1.52
100 101 3.126343 CCGACGCAAACTAGCCTTAAAAT 59.874 43.478 0.00 0.00 0.00 1.82
101 102 4.379082 CCGACGCAAACTAGCCTTAAAATT 60.379 41.667 0.00 0.00 0.00 1.82
102 103 5.163834 CCGACGCAAACTAGCCTTAAAATTA 60.164 40.000 0.00 0.00 0.00 1.40
103 104 5.957796 CGACGCAAACTAGCCTTAAAATTAG 59.042 40.000 0.00 0.00 0.00 1.73
104 105 6.190954 ACGCAAACTAGCCTTAAAATTAGG 57.809 37.500 0.00 0.00 35.80 2.69
113 114 4.584327 CCTTAAAATTAGGCCGGGAATG 57.416 45.455 2.18 0.00 0.00 2.67
114 115 3.320826 CCTTAAAATTAGGCCGGGAATGG 59.679 47.826 2.18 0.00 0.00 3.16
115 116 1.788229 AAAATTAGGCCGGGAATGGG 58.212 50.000 2.18 0.00 0.00 4.00
116 117 0.634465 AAATTAGGCCGGGAATGGGT 59.366 50.000 2.18 0.00 0.00 4.51
117 118 0.185175 AATTAGGCCGGGAATGGGTC 59.815 55.000 2.18 0.00 0.00 4.46
118 119 2.052047 ATTAGGCCGGGAATGGGTCG 62.052 60.000 2.18 0.00 33.31 4.79
119 120 3.682644 TAGGCCGGGAATGGGTCGA 62.683 63.158 2.18 0.00 33.31 4.20
120 121 4.851179 GGCCGGGAATGGGTCGAC 62.851 72.222 7.13 7.13 0.00 4.20
121 122 4.090588 GCCGGGAATGGGTCGACA 62.091 66.667 18.91 0.00 0.00 4.35
122 123 2.186903 CCGGGAATGGGTCGACAG 59.813 66.667 18.91 0.00 0.00 3.51
123 124 2.355986 CCGGGAATGGGTCGACAGA 61.356 63.158 18.91 2.69 0.00 3.41
124 125 1.153628 CGGGAATGGGTCGACAGAC 60.154 63.158 18.91 7.53 46.34 3.51
134 135 2.924432 GTCGACAGACGGACAAAAAG 57.076 50.000 11.55 0.00 42.82 2.27
135 136 1.070776 GTCGACAGACGGACAAAAAGC 60.071 52.381 11.55 0.00 42.82 3.51
136 137 0.934496 CGACAGACGGACAAAAAGCA 59.066 50.000 0.00 0.00 38.46 3.91
137 138 1.070577 CGACAGACGGACAAAAAGCAG 60.071 52.381 0.00 0.00 38.46 4.24
138 139 2.210116 GACAGACGGACAAAAAGCAGA 58.790 47.619 0.00 0.00 0.00 4.26
139 140 1.940613 ACAGACGGACAAAAAGCAGAC 59.059 47.619 0.00 0.00 0.00 3.51
140 141 1.070577 CAGACGGACAAAAAGCAGACG 60.071 52.381 0.00 0.00 0.00 4.18
141 142 0.384353 GACGGACAAAAAGCAGACGC 60.384 55.000 0.00 0.00 38.99 5.19
142 143 1.438710 CGGACAAAAAGCAGACGCG 60.439 57.895 3.53 3.53 45.49 6.01
143 144 1.647084 GGACAAAAAGCAGACGCGT 59.353 52.632 13.85 13.85 45.49 6.01
144 145 0.657368 GGACAAAAAGCAGACGCGTG 60.657 55.000 20.70 3.81 45.49 5.34
145 146 0.027586 GACAAAAAGCAGACGCGTGT 59.972 50.000 20.70 11.10 45.49 4.49
146 147 0.027586 ACAAAAAGCAGACGCGTGTC 59.972 50.000 20.70 21.32 45.49 3.67
147 148 0.657368 CAAAAAGCAGACGCGTGTCC 60.657 55.000 24.75 1.03 46.74 4.02
148 149 2.101209 AAAAAGCAGACGCGTGTCCG 62.101 55.000 24.75 16.57 46.74 4.79
149 150 3.785189 AAAGCAGACGCGTGTCCGT 62.785 57.895 24.75 0.00 46.74 4.69
150 151 3.785189 AAGCAGACGCGTGTCCGTT 62.785 57.895 24.75 10.77 46.74 4.44
151 152 3.335534 GCAGACGCGTGTCCGTTT 61.336 61.111 24.75 4.02 46.74 3.60
152 153 2.544359 CAGACGCGTGTCCGTTTG 59.456 61.111 24.75 13.05 46.74 2.93
153 154 2.660552 AGACGCGTGTCCGTTTGG 60.661 61.111 24.75 0.00 46.74 3.28
154 155 2.659244 GACGCGTGTCCGTTTGGA 60.659 61.111 20.70 0.00 42.24 3.53
162 163 2.505337 TCCGTTTGGATCGACGCG 60.505 61.111 3.53 3.53 40.17 6.01
163 164 2.807895 CCGTTTGGATCGACGCGT 60.808 61.111 13.85 13.85 37.91 6.01
164 165 2.377310 CCGTTTGGATCGACGCGTT 61.377 57.895 15.53 0.00 37.91 4.84
165 166 1.225368 CGTTTGGATCGACGCGTTG 60.225 57.895 20.76 20.76 32.11 4.10
166 167 1.131826 GTTTGGATCGACGCGTTGG 59.868 57.895 25.66 15.24 0.00 3.77
167 168 1.005984 TTTGGATCGACGCGTTGGA 60.006 52.632 25.66 19.98 0.00 3.53
168 169 1.286354 TTTGGATCGACGCGTTGGAC 61.286 55.000 25.66 18.38 0.00 4.02
169 170 2.884207 GGATCGACGCGTTGGACC 60.884 66.667 25.66 22.69 0.00 4.46
170 171 3.245315 GATCGACGCGTTGGACCG 61.245 66.667 25.66 18.04 0.00 4.79
171 172 3.672255 GATCGACGCGTTGGACCGA 62.672 63.158 25.66 22.62 0.00 4.69
172 173 2.931713 GATCGACGCGTTGGACCGAT 62.932 60.000 26.27 26.27 41.85 4.18
173 174 2.552585 ATCGACGCGTTGGACCGATT 62.553 55.000 25.66 10.60 36.71 3.34
174 175 2.377310 CGACGCGTTGGACCGATTT 61.377 57.895 19.10 0.00 0.00 2.17
175 176 1.864176 GACGCGTTGGACCGATTTT 59.136 52.632 15.53 0.00 0.00 1.82
176 177 0.236449 GACGCGTTGGACCGATTTTT 59.764 50.000 15.53 0.00 0.00 1.94
177 178 0.236449 ACGCGTTGGACCGATTTTTC 59.764 50.000 5.58 0.00 0.00 2.29
178 179 0.515564 CGCGTTGGACCGATTTTTCT 59.484 50.000 0.00 0.00 0.00 2.52
179 180 1.724654 CGCGTTGGACCGATTTTTCTG 60.725 52.381 0.00 0.00 0.00 3.02
180 181 1.265905 GCGTTGGACCGATTTTTCTGT 59.734 47.619 0.00 0.00 0.00 3.41
181 182 2.481185 GCGTTGGACCGATTTTTCTGTA 59.519 45.455 0.00 0.00 0.00 2.74
182 183 3.666111 GCGTTGGACCGATTTTTCTGTAC 60.666 47.826 0.00 0.00 0.00 2.90
183 184 3.495377 CGTTGGACCGATTTTTCTGTACA 59.505 43.478 0.00 0.00 0.00 2.90
184 185 4.153475 CGTTGGACCGATTTTTCTGTACAT 59.847 41.667 0.00 0.00 0.00 2.29
185 186 5.390613 GTTGGACCGATTTTTCTGTACATG 58.609 41.667 0.00 0.00 0.00 3.21
186 187 3.438781 TGGACCGATTTTTCTGTACATGC 59.561 43.478 0.00 0.00 0.00 4.06
187 188 3.181500 GGACCGATTTTTCTGTACATGCC 60.181 47.826 0.00 0.00 0.00 4.40
188 189 2.418628 ACCGATTTTTCTGTACATGCCG 59.581 45.455 0.00 0.00 0.00 5.69
189 190 2.675844 CCGATTTTTCTGTACATGCCGA 59.324 45.455 0.00 0.00 0.00 5.54
190 191 3.485216 CCGATTTTTCTGTACATGCCGAC 60.485 47.826 0.00 0.00 0.00 4.79
191 192 3.485216 CGATTTTTCTGTACATGCCGACC 60.485 47.826 0.00 0.00 0.00 4.79
192 193 2.851263 TTTTCTGTACATGCCGACCT 57.149 45.000 0.00 0.00 0.00 3.85
193 194 3.965379 TTTTCTGTACATGCCGACCTA 57.035 42.857 0.00 0.00 0.00 3.08
194 195 3.965379 TTTCTGTACATGCCGACCTAA 57.035 42.857 0.00 0.00 0.00 2.69
195 196 3.965379 TTCTGTACATGCCGACCTAAA 57.035 42.857 0.00 0.00 0.00 1.85
196 197 3.241067 TCTGTACATGCCGACCTAAAC 57.759 47.619 0.00 0.00 0.00 2.01
197 198 2.563620 TCTGTACATGCCGACCTAAACA 59.436 45.455 0.00 0.00 0.00 2.83
198 199 3.007074 TCTGTACATGCCGACCTAAACAA 59.993 43.478 0.00 0.00 0.00 2.83
199 200 3.741249 TGTACATGCCGACCTAAACAAA 58.259 40.909 0.00 0.00 0.00 2.83
200 201 3.499157 TGTACATGCCGACCTAAACAAAC 59.501 43.478 0.00 0.00 0.00 2.93
201 202 1.533731 ACATGCCGACCTAAACAAACG 59.466 47.619 0.00 0.00 0.00 3.60
202 203 0.519961 ATGCCGACCTAAACAAACGC 59.480 50.000 0.00 0.00 0.00 4.84
203 204 1.154543 GCCGACCTAAACAAACGCG 60.155 57.895 3.53 3.53 0.00 6.01
204 205 1.154543 CCGACCTAAACAAACGCGC 60.155 57.895 5.73 0.00 0.00 6.86
205 206 1.506277 CGACCTAAACAAACGCGCG 60.506 57.895 30.96 30.96 0.00 6.86
206 207 1.566077 GACCTAAACAAACGCGCGT 59.434 52.632 32.73 32.73 0.00 6.01
207 208 0.720173 GACCTAAACAAACGCGCGTG 60.720 55.000 38.44 27.09 0.00 5.34
208 209 1.277440 CCTAAACAAACGCGCGTGT 59.723 52.632 38.44 30.74 0.00 4.49
209 210 0.507785 CCTAAACAAACGCGCGTGTA 59.492 50.000 38.44 20.80 0.00 2.90
210 211 1.572950 CTAAACAAACGCGCGTGTAC 58.427 50.000 38.44 0.00 0.00 2.90
211 212 0.111791 TAAACAAACGCGCGTGTACG 60.112 50.000 38.44 25.50 43.27 3.67
212 213 1.750572 AAACAAACGCGCGTGTACGA 61.751 50.000 38.44 0.00 43.02 3.43
213 214 1.750572 AACAAACGCGCGTGTACGAA 61.751 50.000 38.44 0.00 43.02 3.85
214 215 1.084164 CAAACGCGCGTGTACGAAA 60.084 52.632 38.44 0.00 43.02 3.46
215 216 0.449831 CAAACGCGCGTGTACGAAAT 60.450 50.000 38.44 15.84 43.02 2.17
216 217 1.059173 AAACGCGCGTGTACGAAATA 58.941 45.000 38.44 0.00 43.02 1.40
217 218 0.636733 AACGCGCGTGTACGAAATAG 59.363 50.000 38.44 1.66 43.02 1.73
218 219 0.179192 ACGCGCGTGTACGAAATAGA 60.179 50.000 37.37 0.00 43.02 1.98
219 220 1.118033 CGCGCGTGTACGAAATAGAT 58.882 50.000 24.19 0.00 43.02 1.98
220 221 1.120199 CGCGCGTGTACGAAATAGATC 59.880 52.381 24.19 0.00 43.02 2.75
222 223 1.120199 CGCGTGTACGAAATAGATCGC 59.880 52.381 8.82 0.00 46.51 4.58
223 224 1.450905 GCGTGTACGAAATAGATCGCC 59.549 52.381 8.82 0.00 46.51 5.54
224 225 1.707117 CGTGTACGAAATAGATCGCCG 59.293 52.381 0.00 0.00 46.51 6.46
225 226 1.450905 GTGTACGAAATAGATCGCCGC 59.549 52.381 0.00 0.00 46.51 6.53
226 227 0.701303 GTACGAAATAGATCGCCGCG 59.299 55.000 6.39 6.39 46.51 6.46
227 228 0.308684 TACGAAATAGATCGCCGCGT 59.691 50.000 13.39 0.00 46.51 6.01
228 229 0.526954 ACGAAATAGATCGCCGCGTT 60.527 50.000 13.39 3.97 46.51 4.84
229 230 0.111704 CGAAATAGATCGCCGCGTTG 60.112 55.000 13.39 0.00 35.85 4.10
230 231 0.232303 GAAATAGATCGCCGCGTTGG 59.768 55.000 13.39 0.00 42.50 3.77
231 232 0.179094 AAATAGATCGCCGCGTTGGA 60.179 50.000 13.39 0.00 42.00 3.53
232 233 0.597637 AATAGATCGCCGCGTTGGAG 60.598 55.000 13.39 0.00 42.00 3.86
233 234 1.735376 ATAGATCGCCGCGTTGGAGT 61.735 55.000 13.39 0.00 42.00 3.85
234 235 1.940883 TAGATCGCCGCGTTGGAGTT 61.941 55.000 13.39 0.00 42.00 3.01
235 236 3.083600 GATCGCCGCGTTGGAGTTG 62.084 63.158 13.39 0.00 42.00 3.16
238 239 4.090057 GCCGCGTTGGAGTTGCTC 62.090 66.667 4.92 0.00 42.00 4.26
239 240 2.357517 CCGCGTTGGAGTTGCTCT 60.358 61.111 4.92 0.00 42.00 4.09
240 241 1.961277 CCGCGTTGGAGTTGCTCTT 60.961 57.895 4.92 0.00 42.00 2.85
241 242 0.669318 CCGCGTTGGAGTTGCTCTTA 60.669 55.000 4.92 0.00 42.00 2.10
242 243 0.716108 CGCGTTGGAGTTGCTCTTAG 59.284 55.000 0.00 0.00 0.00 2.18
243 244 1.079503 GCGTTGGAGTTGCTCTTAGG 58.920 55.000 0.00 0.00 0.00 2.69
244 245 1.726853 CGTTGGAGTTGCTCTTAGGG 58.273 55.000 0.00 0.00 0.00 3.53
245 246 1.454201 GTTGGAGTTGCTCTTAGGGC 58.546 55.000 0.00 0.00 0.00 5.19
246 247 1.064003 TTGGAGTTGCTCTTAGGGCA 58.936 50.000 1.11 1.11 37.97 5.36
247 248 1.289160 TGGAGTTGCTCTTAGGGCAT 58.711 50.000 7.91 0.00 39.54 4.40
248 249 2.477245 TGGAGTTGCTCTTAGGGCATA 58.523 47.619 7.91 0.00 39.54 3.14
249 250 2.843730 TGGAGTTGCTCTTAGGGCATAA 59.156 45.455 7.91 0.00 39.54 1.90
250 251 3.459598 TGGAGTTGCTCTTAGGGCATAAT 59.540 43.478 7.91 0.00 39.54 1.28
251 252 4.079787 TGGAGTTGCTCTTAGGGCATAATT 60.080 41.667 7.91 0.00 39.54 1.40
252 253 4.889995 GGAGTTGCTCTTAGGGCATAATTT 59.110 41.667 7.91 0.00 39.54 1.82
253 254 6.062095 GGAGTTGCTCTTAGGGCATAATTTA 58.938 40.000 7.91 0.00 39.54 1.40
254 255 6.546034 GGAGTTGCTCTTAGGGCATAATTTAA 59.454 38.462 7.91 0.00 39.54 1.52
255 256 7.231519 GGAGTTGCTCTTAGGGCATAATTTAAT 59.768 37.037 7.91 0.00 39.54 1.40
256 257 8.539117 AGTTGCTCTTAGGGCATAATTTAATT 57.461 30.769 7.91 0.00 39.54 1.40
257 258 8.633561 AGTTGCTCTTAGGGCATAATTTAATTC 58.366 33.333 7.91 0.00 39.54 2.17
258 259 7.524717 TGCTCTTAGGGCATAATTTAATTCC 57.475 36.000 1.11 0.00 34.56 3.01
259 260 7.066142 TGCTCTTAGGGCATAATTTAATTCCA 58.934 34.615 1.11 0.00 34.56 3.53
260 261 7.729881 TGCTCTTAGGGCATAATTTAATTCCAT 59.270 33.333 1.11 0.00 34.56 3.41
261 262 9.243105 GCTCTTAGGGCATAATTTAATTCCATA 57.757 33.333 0.00 0.00 0.00 2.74
266 267 7.657336 AGGGCATAATTTAATTCCATACAACG 58.343 34.615 0.00 0.00 0.00 4.10
267 268 7.504238 AGGGCATAATTTAATTCCATACAACGA 59.496 33.333 0.00 0.00 0.00 3.85
268 269 7.807907 GGGCATAATTTAATTCCATACAACGAG 59.192 37.037 0.00 0.00 0.00 4.18
269 270 7.807907 GGCATAATTTAATTCCATACAACGAGG 59.192 37.037 0.00 0.00 0.00 4.63
270 271 7.807907 GCATAATTTAATTCCATACAACGAGGG 59.192 37.037 0.00 0.00 0.00 4.30
271 272 5.767816 ATTTAATTCCATACAACGAGGGC 57.232 39.130 0.00 0.00 0.00 5.19
272 273 2.799126 AATTCCATACAACGAGGGCA 57.201 45.000 0.00 0.00 0.00 5.36
273 274 2.038387 ATTCCATACAACGAGGGCAC 57.962 50.000 0.00 0.00 0.00 5.01
286 287 3.747976 GGCACCGGCGCAAAGATT 61.748 61.111 17.66 0.00 42.47 2.40
287 288 2.202479 GCACCGGCGCAAAGATTC 60.202 61.111 10.19 0.00 0.00 2.52
288 289 2.485122 CACCGGCGCAAAGATTCC 59.515 61.111 10.83 0.00 0.00 3.01
289 290 2.033448 ACCGGCGCAAAGATTCCA 59.967 55.556 10.83 0.00 0.00 3.53
290 291 1.378514 ACCGGCGCAAAGATTCCAT 60.379 52.632 10.83 0.00 0.00 3.41
291 292 1.356624 CCGGCGCAAAGATTCCATC 59.643 57.895 10.83 0.00 0.00 3.51
292 293 1.097547 CCGGCGCAAAGATTCCATCT 61.098 55.000 10.83 0.00 42.61 2.90
293 294 0.305922 CGGCGCAAAGATTCCATCTC 59.694 55.000 10.83 0.00 39.08 2.75
294 295 0.305922 GGCGCAAAGATTCCATCTCG 59.694 55.000 10.83 0.00 39.08 4.04
295 296 0.305922 GCGCAAAGATTCCATCTCGG 59.694 55.000 0.30 0.00 39.08 4.63
296 297 0.305922 CGCAAAGATTCCATCTCGGC 59.694 55.000 0.00 0.00 39.08 5.54
297 298 1.382522 GCAAAGATTCCATCTCGGCA 58.617 50.000 5.26 0.00 39.08 5.69
298 299 1.332997 GCAAAGATTCCATCTCGGCAG 59.667 52.381 5.26 0.00 39.08 4.85
299 300 2.636830 CAAAGATTCCATCTCGGCAGT 58.363 47.619 0.00 0.00 39.08 4.40
300 301 3.012518 CAAAGATTCCATCTCGGCAGTT 58.987 45.455 0.00 0.00 39.08 3.16
301 302 3.356529 AAGATTCCATCTCGGCAGTTT 57.643 42.857 0.00 0.00 39.08 2.66
302 303 2.636830 AGATTCCATCTCGGCAGTTTG 58.363 47.619 0.00 0.00 33.42 2.93
303 304 2.026822 AGATTCCATCTCGGCAGTTTGT 60.027 45.455 0.00 0.00 33.42 2.83
304 305 1.522668 TTCCATCTCGGCAGTTTGTG 58.477 50.000 0.00 0.00 33.14 3.33
313 314 1.497722 GCAGTTTGTGCGGTCTAGC 59.502 57.895 0.00 0.00 43.99 3.42
314 315 0.951040 GCAGTTTGTGCGGTCTAGCT 60.951 55.000 0.00 0.00 43.99 3.32
315 316 1.512926 CAGTTTGTGCGGTCTAGCTT 58.487 50.000 0.00 0.00 38.13 3.74
316 317 1.195448 CAGTTTGTGCGGTCTAGCTTG 59.805 52.381 0.00 0.00 38.13 4.01
317 318 0.110192 GTTTGTGCGGTCTAGCTTGC 60.110 55.000 0.00 0.00 38.13 4.01
318 319 1.234615 TTTGTGCGGTCTAGCTTGCC 61.235 55.000 0.00 0.00 38.13 4.52
319 320 2.111999 TTGTGCGGTCTAGCTTGCCT 62.112 55.000 0.00 0.00 38.13 4.75
320 321 2.103042 GTGCGGTCTAGCTTGCCTG 61.103 63.158 0.00 0.00 38.13 4.85
321 322 2.512515 GCGGTCTAGCTTGCCTGG 60.513 66.667 0.00 0.00 0.00 4.45
322 323 3.019003 GCGGTCTAGCTTGCCTGGA 62.019 63.158 0.00 0.00 0.00 3.86
323 324 1.826024 CGGTCTAGCTTGCCTGGAT 59.174 57.895 0.00 0.00 33.32 3.41
324 325 0.179000 CGGTCTAGCTTGCCTGGATT 59.821 55.000 0.00 0.00 33.32 3.01
357 358 3.821055 GCGCCGGCAGCCAATTTA 61.821 61.111 28.98 0.00 38.78 1.40
361 362 0.735978 GCCGGCAGCCAATTTAACAC 60.736 55.000 24.80 0.00 34.35 3.32
378 379 1.227853 ACTTGCTCGGTGGTTGGTC 60.228 57.895 0.00 0.00 0.00 4.02
399 400 3.804193 GCCGGCTGCTGCACTAAC 61.804 66.667 22.15 0.00 41.91 2.34
400 401 2.358615 CCGGCTGCTGCACTAACA 60.359 61.111 17.89 0.00 41.91 2.41
401 402 1.965930 CCGGCTGCTGCACTAACAA 60.966 57.895 17.89 0.00 41.91 2.83
402 403 1.308069 CCGGCTGCTGCACTAACAAT 61.308 55.000 17.89 0.00 41.91 2.71
404 405 1.068333 CGGCTGCTGCACTAACAATTT 60.068 47.619 17.89 0.00 41.91 1.82
405 406 2.599659 GGCTGCTGCACTAACAATTTC 58.400 47.619 17.89 0.00 41.91 2.17
406 407 2.229784 GGCTGCTGCACTAACAATTTCT 59.770 45.455 17.89 0.00 41.91 2.52
407 408 3.305608 GGCTGCTGCACTAACAATTTCTT 60.306 43.478 17.89 0.00 41.91 2.52
408 409 4.301628 GCTGCTGCACTAACAATTTCTTT 58.698 39.130 11.11 0.00 39.41 2.52
409 410 4.746611 GCTGCTGCACTAACAATTTCTTTT 59.253 37.500 11.11 0.00 39.41 2.27
445 446 1.472480 CAACCTTAAGCATTGACCCGG 59.528 52.381 10.66 0.00 0.00 5.73
540 556 6.073331 CGTTTTGTTGCATGGAATTATTTGGT 60.073 34.615 1.94 0.00 0.00 3.67
642 691 1.079127 CGACCCGAGGCACTGAATT 60.079 57.895 0.00 0.00 41.55 2.17
656 705 5.632347 GGCACTGAATTTTCTTCATGACTTG 59.368 40.000 0.00 0.00 0.00 3.16
657 706 6.211515 GCACTGAATTTTCTTCATGACTTGT 58.788 36.000 0.00 0.00 0.00 3.16
658 707 7.362662 GCACTGAATTTTCTTCATGACTTGTA 58.637 34.615 0.00 0.00 0.00 2.41
698 747 3.675467 AGTTGTCTTGCTCGTTTTGTC 57.325 42.857 0.00 0.00 0.00 3.18
806 1245 5.215160 GCCGAATCCATTTATTTACTGCTG 58.785 41.667 0.00 0.00 0.00 4.41
831 1270 2.858158 GCACCTCGTTTACGTGCC 59.142 61.111 0.00 0.00 45.64 5.01
832 1271 1.957186 GCACCTCGTTTACGTGCCA 60.957 57.895 0.00 0.00 45.64 4.92
1008 1919 1.814634 GCAGCTCCCATCCTTCATCTG 60.815 57.143 0.00 0.00 0.00 2.90
1024 1935 1.093972 TCTGCAACACACACCAACAG 58.906 50.000 0.00 0.00 0.00 3.16
1032 1943 0.179045 ACACACCAACAGACAGAGCC 60.179 55.000 0.00 0.00 0.00 4.70
1033 1944 1.069765 ACACCAACAGACAGAGCCG 59.930 57.895 0.00 0.00 0.00 5.52
1061 1981 1.142748 GCAGAGCATCACGTAGCCT 59.857 57.895 0.00 0.00 37.82 4.58
1066 1986 0.824109 AGCATCACGTAGCCTTAGCA 59.176 50.000 0.00 0.00 43.56 3.49
1067 1987 1.202463 AGCATCACGTAGCCTTAGCAG 60.202 52.381 0.00 0.00 43.56 4.24
1098 2018 4.000988 GAGAGAGAGAGAGAACGAAGTGT 58.999 47.826 0.00 0.00 45.00 3.55
1102 2022 4.825085 AGAGAGAGAGAACGAAGTGTCTTT 59.175 41.667 0.00 0.00 45.00 2.52
1577 2539 3.899360 CCCAATACTGATTACCCTCCGTA 59.101 47.826 0.00 0.00 0.00 4.02
1585 2547 5.424252 ACTGATTACCCTCCGTAAATTCTGA 59.576 40.000 0.00 0.00 40.32 3.27
1591 2553 4.227527 ACCCTCCGTAAATTCTGATTCCTT 59.772 41.667 0.00 0.00 0.00 3.36
1616 2583 1.965935 AAATGCACCCCAAAAACTGC 58.034 45.000 0.00 0.00 0.00 4.40
1617 2584 0.108396 AATGCACCCCAAAAACTGCC 59.892 50.000 0.00 0.00 0.00 4.85
1619 2586 1.069596 GCACCCCAAAAACTGCCTG 59.930 57.895 0.00 0.00 0.00 4.85
1620 2587 1.069596 CACCCCAAAAACTGCCTGC 59.930 57.895 0.00 0.00 0.00 4.85
1667 2659 8.208224 TCAACACATATGAGGACGGTAATTAAT 58.792 33.333 10.38 0.00 0.00 1.40
1668 2660 8.836413 CAACACATATGAGGACGGTAATTAATT 58.164 33.333 10.38 5.89 0.00 1.40
1764 2787 4.081642 GGAAAGGGTCCTTGGAAATTAAGC 60.082 45.833 2.65 0.00 43.98 3.09
1767 2790 3.076032 AGGGTCCTTGGAAATTAAGCTGT 59.924 43.478 0.00 0.00 0.00 4.40
1768 2791 4.291249 AGGGTCCTTGGAAATTAAGCTGTA 59.709 41.667 0.00 0.00 0.00 2.74
1781 2834 2.349297 AGCTGTACTACTTGACACGC 57.651 50.000 0.00 0.00 0.00 5.34
1872 2972 3.093814 GGGAAATACCGTTCATTTGGGT 58.906 45.455 0.00 0.00 40.11 4.51
1873 2973 4.271661 GGGAAATACCGTTCATTTGGGTA 58.728 43.478 0.00 0.00 40.36 3.69
1876 2976 5.183522 GGAAATACCGTTCATTTGGGTAACA 59.816 40.000 0.00 0.00 39.57 2.41
1917 3175 6.398918 TCTTATCTGAGCTAAGCTTTTCGTT 58.601 36.000 3.20 0.00 39.88 3.85
1924 3182 4.241681 AGCTAAGCTTTTCGTTCTCTCTG 58.758 43.478 3.20 0.00 33.89 3.35
1937 3195 9.496873 TTTCGTTCTCTCTGGAAAAATACATTA 57.503 29.630 0.00 0.00 0.00 1.90
1940 3200 9.151471 CGTTCTCTCTGGAAAAATACATTAAGA 57.849 33.333 0.00 0.00 0.00 2.10
1974 3236 3.802722 CTTACTCAGCACAGCAAGTTC 57.197 47.619 3.07 0.00 31.32 3.01
1976 3238 2.267174 ACTCAGCACAGCAAGTTCAT 57.733 45.000 0.00 0.00 0.00 2.57
2037 3300 2.158740 TGGAGAAATGTGTGGACCGAAA 60.159 45.455 0.00 0.00 0.00 3.46
2038 3301 3.081804 GGAGAAATGTGTGGACCGAAAT 58.918 45.455 0.00 0.00 0.00 2.17
2039 3302 3.119849 GGAGAAATGTGTGGACCGAAATG 60.120 47.826 0.00 0.00 0.00 2.32
2040 3303 3.486383 AGAAATGTGTGGACCGAAATGT 58.514 40.909 0.00 0.00 0.00 2.71
2041 3304 4.647611 AGAAATGTGTGGACCGAAATGTA 58.352 39.130 0.00 0.00 0.00 2.29
2042 3305 4.695455 AGAAATGTGTGGACCGAAATGTAG 59.305 41.667 0.00 0.00 0.00 2.74
2043 3306 3.973206 ATGTGTGGACCGAAATGTAGA 57.027 42.857 0.00 0.00 0.00 2.59
2044 3307 3.034721 TGTGTGGACCGAAATGTAGAC 57.965 47.619 0.00 0.00 0.00 2.59
2045 3308 2.365941 TGTGTGGACCGAAATGTAGACA 59.634 45.455 0.00 0.00 0.00 3.41
2046 3309 2.993899 GTGTGGACCGAAATGTAGACAG 59.006 50.000 0.00 0.00 0.00 3.51
2047 3310 2.631062 TGTGGACCGAAATGTAGACAGT 59.369 45.455 0.00 0.00 0.00 3.55
2053 3316 5.356470 GGACCGAAATGTAGACAGTAGTAGT 59.644 44.000 0.00 0.00 0.00 2.73
2057 3323 6.036517 CCGAAATGTAGACAGTAGTAGTACGT 59.963 42.308 2.04 0.00 33.97 3.57
2105 3375 1.718396 GGCAACGTAACCTGTCTACC 58.282 55.000 0.00 0.00 0.00 3.18
2107 3377 1.336240 GCAACGTAACCTGTCTACCGT 60.336 52.381 0.00 0.00 0.00 4.83
2119 3389 4.000988 CTGTCTACCGTTTGCTATTGGTT 58.999 43.478 0.00 0.00 35.93 3.67
2120 3390 4.391155 TGTCTACCGTTTGCTATTGGTTT 58.609 39.130 0.00 0.00 35.93 3.27
2121 3391 4.214545 TGTCTACCGTTTGCTATTGGTTTG 59.785 41.667 0.00 0.00 35.93 2.93
2122 3392 3.754323 TCTACCGTTTGCTATTGGTTTGG 59.246 43.478 0.00 0.00 35.93 3.28
2123 3393 2.312390 ACCGTTTGCTATTGGTTTGGT 58.688 42.857 0.00 0.00 0.00 3.67
2135 3405 0.168128 GGTTTGGTAGTCATGTGCGC 59.832 55.000 0.00 0.00 0.00 6.09
2138 3408 1.011968 TTGGTAGTCATGTGCGCGTC 61.012 55.000 8.43 0.00 0.00 5.19
2142 3412 4.178255 GTCATGTGCGCGTCGTCG 62.178 66.667 8.43 0.00 40.37 5.12
2143 3413 4.392576 TCATGTGCGCGTCGTCGA 62.393 61.111 8.43 0.00 39.71 4.20
2164 3434 1.686355 TTACAAACCACCACAGCAGG 58.314 50.000 0.00 0.00 0.00 4.85
2176 3446 1.026718 ACAGCAGGCGATTAGTTGGC 61.027 55.000 0.00 0.00 34.56 4.52
2187 3457 1.825090 TTAGTTGGCACTCCTGCATG 58.175 50.000 0.00 0.00 46.28 4.06
2190 3573 1.561076 AGTTGGCACTCCTGCATGATA 59.439 47.619 0.00 0.00 46.28 2.15
2195 3578 4.989277 TGGCACTCCTGCATGATAATATT 58.011 39.130 0.00 0.00 46.28 1.28
2234 3617 8.976986 ATGAGATTTGCATTTTGAGTAAGAAC 57.023 30.769 0.00 0.00 0.00 3.01
2239 3622 8.729805 ATTTGCATTTTGAGTAAGAACCAAAA 57.270 26.923 0.00 0.00 38.71 2.44
2269 3652 8.693542 AAGAAAACATGTGAAAAGTGAAGAAG 57.306 30.769 0.00 0.00 0.00 2.85
2321 3707 1.231958 CGCCTCGCACCTACCAAAAA 61.232 55.000 0.00 0.00 0.00 1.94
2348 3782 3.251729 CCTTCACGATATTTCCATGCCTG 59.748 47.826 0.00 0.00 0.00 4.85
2359 3793 3.737559 TCCATGCCTGTCCAACTTAAT 57.262 42.857 0.00 0.00 0.00 1.40
2372 3816 4.522789 TCCAACTTAATTTTGTCCTCTGCC 59.477 41.667 0.00 0.00 0.00 4.85
2464 3945 3.490249 CCATCTTGTCGCATGCATGAAAT 60.490 43.478 30.64 8.62 0.00 2.17
2483 3964 1.913451 TAAATTTGTCGTGGCCGGCG 61.913 55.000 22.54 6.96 43.03 6.46
2491 3972 2.102161 GTGGCCGGCGCTATTTTG 59.898 61.111 22.54 0.00 34.44 2.44
2600 4159 4.259933 TGAACCTAGGATGGCTACTGTA 57.740 45.455 17.98 0.00 0.00 2.74
2601 4160 4.616553 TGAACCTAGGATGGCTACTGTAA 58.383 43.478 17.98 0.00 0.00 2.41
2637 4218 1.270550 CTCTGTTTCTGCCGCCAAAAT 59.729 47.619 0.00 0.00 0.00 1.82
2686 5759 3.036084 CACTCGTGCCGTGTGGTC 61.036 66.667 16.78 0.00 44.17 4.02
2830 5916 2.171840 ACGAGTACAGCAACTGGATCT 58.828 47.619 0.00 0.00 35.51 2.75
2832 5918 2.164422 CGAGTACAGCAACTGGATCTGA 59.836 50.000 0.00 0.00 35.51 3.27
2834 5920 4.679106 CGAGTACAGCAACTGGATCTGATT 60.679 45.833 0.00 0.00 35.51 2.57
2846 5940 3.181462 TGGATCTGATTCCGTGATTCCTG 60.181 47.826 0.00 0.00 38.74 3.86
2892 5988 4.935495 CGTGGCCCTGCACTGTGT 62.935 66.667 9.86 0.00 0.00 3.72
2903 6006 2.811431 CTGCACTGTGTCCCGATTTTAA 59.189 45.455 9.86 0.00 0.00 1.52
2913 6016 4.142116 TGTCCCGATTTTAACTGCGATCTA 60.142 41.667 0.00 0.00 0.00 1.98
2997 6130 0.895100 TGATGTGTTTGCAGGGCCTC 60.895 55.000 0.95 0.00 0.00 4.70
3033 6166 2.166459 CAGCTACTTCATCACGGAGGAA 59.834 50.000 0.00 2.00 31.56 3.36
3039 6172 5.160607 ACTTCATCACGGAGGAAAACATA 57.839 39.130 3.32 0.00 32.04 2.29
3114 6247 4.007644 CTGGCCGGAGCTGACACA 62.008 66.667 5.28 0.00 39.73 3.72
3161 6294 2.292292 AGAACCACAATAACAACGGCAC 59.708 45.455 0.00 0.00 0.00 5.01
3282 6415 4.564406 GGTGGTCTGATGAACAAGATGACT 60.564 45.833 0.00 0.00 42.15 3.41
3339 6472 4.386951 TACGCATGCGGGCACTGT 62.387 61.111 39.95 21.97 44.69 3.55
3456 6589 3.414700 GCCGTGGACTTCTGCGTG 61.415 66.667 0.00 0.00 0.00 5.34
3661 6794 3.006940 AGTGCGTGTACATACATTTGGG 58.993 45.455 0.00 0.00 38.63 4.12
3665 6798 3.181491 GCGTGTACATACATTTGGGCATT 60.181 43.478 0.00 0.00 38.63 3.56
3666 6799 4.676723 GCGTGTACATACATTTGGGCATTT 60.677 41.667 0.00 0.00 38.63 2.32
3667 6800 4.797868 CGTGTACATACATTTGGGCATTTG 59.202 41.667 0.00 0.00 38.63 2.32
3668 6801 5.108517 GTGTACATACATTTGGGCATTTGG 58.891 41.667 0.00 0.00 38.63 3.28
3669 6802 3.264998 ACATACATTTGGGCATTTGGC 57.735 42.857 0.00 0.00 43.74 4.52
4137 7272 2.885861 CGGAGGACGGAGGAGTTG 59.114 66.667 0.00 0.00 39.42 3.16
4138 7273 2.579738 GGAGGACGGAGGAGTTGC 59.420 66.667 0.00 0.00 0.00 4.17
4139 7274 2.283529 GGAGGACGGAGGAGTTGCA 61.284 63.158 0.00 0.00 0.00 4.08
4140 7275 1.671742 GAGGACGGAGGAGTTGCAA 59.328 57.895 0.00 0.00 0.00 4.08
4141 7276 0.670854 GAGGACGGAGGAGTTGCAAC 60.671 60.000 22.17 22.17 0.00 4.17
4142 7277 1.671379 GGACGGAGGAGTTGCAACC 60.671 63.158 25.62 16.44 0.00 3.77
4144 7279 2.742372 CGGAGGAGTTGCAACCGG 60.742 66.667 25.62 10.83 39.92 5.28
4145 7280 3.056328 GGAGGAGTTGCAACCGGC 61.056 66.667 25.62 15.02 45.13 6.13
4146 7281 3.056328 GAGGAGTTGCAACCGGCC 61.056 66.667 25.62 22.51 43.89 6.13
4147 7282 3.842925 GAGGAGTTGCAACCGGCCA 62.843 63.158 25.62 0.00 43.89 5.36
4148 7283 3.670377 GGAGTTGCAACCGGCCAC 61.670 66.667 25.62 10.24 43.89 5.01
4149 7284 4.025401 GAGTTGCAACCGGCCACG 62.025 66.667 25.62 0.00 42.69 4.94
4150 7285 4.868116 AGTTGCAACCGGCCACGT 62.868 61.111 25.62 1.63 42.69 4.49
4151 7286 4.322385 GTTGCAACCGGCCACGTC 62.322 66.667 19.15 0.00 43.89 4.34
4152 7287 4.858680 TTGCAACCGGCCACGTCA 62.859 61.111 0.00 0.00 43.89 4.35
4520 7683 2.159310 CGTTCTGTTTTGCTGGAACCAA 60.159 45.455 0.00 0.00 35.90 3.67
4549 7712 4.911514 TTTTGCTACCACCAGAGTTTTC 57.088 40.909 0.00 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.323725 GGTGGCACATTGGTCATCCT 60.324 55.000 20.82 0.00 44.52 3.24
1 2 0.611618 TGGTGGCACATTGGTCATCC 60.612 55.000 20.82 0.00 44.52 3.51
2 3 1.067635 GTTGGTGGCACATTGGTCATC 60.068 52.381 20.82 2.53 44.52 2.92
3 4 0.968405 GTTGGTGGCACATTGGTCAT 59.032 50.000 20.82 0.00 44.52 3.06
4 5 0.106268 AGTTGGTGGCACATTGGTCA 60.106 50.000 20.82 3.78 44.52 4.02
5 6 1.812571 CTAGTTGGTGGCACATTGGTC 59.187 52.381 20.82 0.77 44.52 4.02
6 7 1.909700 CTAGTTGGTGGCACATTGGT 58.090 50.000 20.82 1.98 44.52 3.67
7 8 0.527565 GCTAGTTGGTGGCACATTGG 59.472 55.000 20.82 4.59 44.52 3.16
8 9 0.168788 CGCTAGTTGGTGGCACATTG 59.831 55.000 20.82 4.42 44.52 2.82
9 10 0.960364 CCGCTAGTTGGTGGCACATT 60.960 55.000 20.82 3.88 44.52 2.71
10 11 1.377202 CCGCTAGTTGGTGGCACAT 60.377 57.895 20.82 4.57 44.52 3.21
11 12 2.031919 CCGCTAGTTGGTGGCACA 59.968 61.111 20.82 2.61 31.47 4.57
12 13 2.746277 CCCGCTAGTTGGTGGCAC 60.746 66.667 9.70 9.70 35.70 5.01
13 14 4.028490 CCCCGCTAGTTGGTGGCA 62.028 66.667 0.00 0.00 35.70 4.92
18 19 4.530857 CTCCGCCCCGCTAGTTGG 62.531 72.222 0.00 0.00 0.00 3.77
19 20 4.530857 CCTCCGCCCCGCTAGTTG 62.531 72.222 0.00 0.00 0.00 3.16
51 52 4.696172 GAAACGGACACGCGCACG 62.696 66.667 5.73 8.53 46.04 5.34
52 53 2.950172 ATGAAACGGACACGCGCAC 61.950 57.895 5.73 0.00 46.04 5.34
53 54 2.663520 ATGAAACGGACACGCGCA 60.664 55.556 5.73 0.00 46.04 6.09
54 55 2.202171 CATGAAACGGACACGCGC 60.202 61.111 5.73 0.00 46.04 6.86
55 56 1.129809 GACATGAAACGGACACGCG 59.870 57.895 3.53 3.53 46.04 6.01
56 57 1.495951 GGACATGAAACGGACACGC 59.504 57.895 0.00 0.00 46.04 5.34
58 59 0.511221 CACGGACATGAAACGGACAC 59.489 55.000 0.00 0.00 0.00 3.67
59 60 1.225376 GCACGGACATGAAACGGACA 61.225 55.000 0.00 0.00 0.00 4.02
60 61 1.495951 GCACGGACATGAAACGGAC 59.504 57.895 0.00 0.00 0.00 4.79
61 62 1.669760 GGCACGGACATGAAACGGA 60.670 57.895 0.00 0.00 0.00 4.69
62 63 2.867472 GGCACGGACATGAAACGG 59.133 61.111 0.00 0.00 0.00 4.44
77 78 0.738412 TAAGGCTAGTTTGCGTCGGC 60.738 55.000 0.00 0.00 40.52 5.54
78 79 1.717194 TTAAGGCTAGTTTGCGTCGG 58.283 50.000 0.00 0.00 0.00 4.79
79 80 3.799137 TTTTAAGGCTAGTTTGCGTCG 57.201 42.857 0.00 0.00 0.00 5.12
80 81 6.255950 CCTAATTTTAAGGCTAGTTTGCGTC 58.744 40.000 0.00 0.00 0.00 5.19
81 82 6.190954 CCTAATTTTAAGGCTAGTTTGCGT 57.809 37.500 0.00 0.00 0.00 5.24
92 93 3.320826 CCATTCCCGGCCTAATTTTAAGG 59.679 47.826 0.00 0.00 37.17 2.69
93 94 3.320826 CCCATTCCCGGCCTAATTTTAAG 59.679 47.826 0.00 0.00 0.00 1.85
94 95 3.301274 CCCATTCCCGGCCTAATTTTAA 58.699 45.455 0.00 0.00 0.00 1.52
95 96 2.245287 ACCCATTCCCGGCCTAATTTTA 59.755 45.455 0.00 0.00 0.00 1.52
96 97 1.007842 ACCCATTCCCGGCCTAATTTT 59.992 47.619 0.00 0.00 0.00 1.82
97 98 0.634465 ACCCATTCCCGGCCTAATTT 59.366 50.000 0.00 0.00 0.00 1.82
98 99 0.185175 GACCCATTCCCGGCCTAATT 59.815 55.000 0.00 0.00 0.00 1.40
99 100 1.844130 GACCCATTCCCGGCCTAAT 59.156 57.895 0.00 0.00 0.00 1.73
100 101 2.737881 CGACCCATTCCCGGCCTAA 61.738 63.158 0.00 0.00 0.00 2.69
101 102 3.158648 CGACCCATTCCCGGCCTA 61.159 66.667 0.00 0.00 0.00 3.93
103 104 4.851179 GTCGACCCATTCCCGGCC 62.851 72.222 3.51 0.00 0.00 6.13
104 105 4.090588 TGTCGACCCATTCCCGGC 62.091 66.667 14.12 0.00 0.00 6.13
105 106 2.186903 CTGTCGACCCATTCCCGG 59.813 66.667 14.12 0.00 0.00 5.73
106 107 1.153628 GTCTGTCGACCCATTCCCG 60.154 63.158 14.12 0.00 33.98 5.14
107 108 1.153628 CGTCTGTCGACCCATTCCC 60.154 63.158 14.12 0.00 42.86 3.97
108 109 1.153628 CCGTCTGTCGACCCATTCC 60.154 63.158 14.12 0.00 42.86 3.01
109 110 0.458025 GTCCGTCTGTCGACCCATTC 60.458 60.000 14.12 0.00 42.86 2.67
110 111 1.183030 TGTCCGTCTGTCGACCCATT 61.183 55.000 14.12 0.00 42.86 3.16
111 112 1.183030 TTGTCCGTCTGTCGACCCAT 61.183 55.000 14.12 0.00 42.86 4.00
112 113 1.393487 TTTGTCCGTCTGTCGACCCA 61.393 55.000 14.12 0.00 42.86 4.51
113 114 0.249573 TTTTGTCCGTCTGTCGACCC 60.250 55.000 14.12 0.00 42.86 4.46
114 115 1.525619 CTTTTTGTCCGTCTGTCGACC 59.474 52.381 14.12 0.00 42.86 4.79
115 116 1.070776 GCTTTTTGTCCGTCTGTCGAC 60.071 52.381 9.11 9.11 42.86 4.20
116 117 1.214367 GCTTTTTGTCCGTCTGTCGA 58.786 50.000 0.00 0.00 42.86 4.20
117 118 0.934496 TGCTTTTTGTCCGTCTGTCG 59.066 50.000 0.00 0.00 39.52 4.35
118 119 2.032808 GTCTGCTTTTTGTCCGTCTGTC 60.033 50.000 0.00 0.00 0.00 3.51
119 120 1.940613 GTCTGCTTTTTGTCCGTCTGT 59.059 47.619 0.00 0.00 0.00 3.41
120 121 1.070577 CGTCTGCTTTTTGTCCGTCTG 60.071 52.381 0.00 0.00 0.00 3.51
121 122 1.217882 CGTCTGCTTTTTGTCCGTCT 58.782 50.000 0.00 0.00 0.00 4.18
122 123 0.384353 GCGTCTGCTTTTTGTCCGTC 60.384 55.000 0.00 0.00 38.39 4.79
123 124 1.647084 GCGTCTGCTTTTTGTCCGT 59.353 52.632 0.00 0.00 38.39 4.69
124 125 1.438710 CGCGTCTGCTTTTTGTCCG 60.439 57.895 0.00 0.00 39.65 4.79
125 126 0.657368 CACGCGTCTGCTTTTTGTCC 60.657 55.000 9.86 0.00 39.65 4.02
126 127 0.027586 ACACGCGTCTGCTTTTTGTC 59.972 50.000 9.86 0.00 39.65 3.18
127 128 0.027586 GACACGCGTCTGCTTTTTGT 59.972 50.000 9.86 0.00 39.22 2.83
128 129 0.657368 GGACACGCGTCTGCTTTTTG 60.657 55.000 9.86 0.00 42.21 2.44
129 130 1.647084 GGACACGCGTCTGCTTTTT 59.353 52.632 9.86 0.00 42.21 1.94
130 131 2.594962 CGGACACGCGTCTGCTTTT 61.595 57.895 9.86 0.00 41.53 2.27
131 132 3.036084 CGGACACGCGTCTGCTTT 61.036 61.111 9.86 0.00 41.53 3.51
136 137 2.430382 ATCCAAACGGACACGCGTCT 62.430 55.000 9.86 0.00 46.04 4.18
137 138 1.952266 GATCCAAACGGACACGCGTC 61.952 60.000 9.86 0.00 46.04 5.19
138 139 2.025418 GATCCAAACGGACACGCGT 61.025 57.895 5.58 5.58 46.04 6.01
139 140 2.776072 GATCCAAACGGACACGCG 59.224 61.111 3.53 3.53 46.04 6.01
140 141 1.735198 TCGATCCAAACGGACACGC 60.735 57.895 0.00 0.00 46.04 5.34
142 143 1.952266 GCGTCGATCCAAACGGACAC 61.952 60.000 0.00 0.00 39.24 3.67
143 144 1.735198 GCGTCGATCCAAACGGACA 60.735 57.895 0.00 0.00 39.24 4.02
144 145 2.785105 CGCGTCGATCCAAACGGAC 61.785 63.158 0.00 0.29 39.24 4.79
145 146 2.505337 CGCGTCGATCCAAACGGA 60.505 61.111 0.00 0.00 39.24 4.69
146 147 2.377310 AACGCGTCGATCCAAACGG 61.377 57.895 14.44 5.12 39.24 4.44
147 148 1.225368 CAACGCGTCGATCCAAACG 60.225 57.895 14.44 5.77 41.68 3.60
148 149 1.131826 CCAACGCGTCGATCCAAAC 59.868 57.895 14.44 0.00 0.00 2.93
149 150 1.005984 TCCAACGCGTCGATCCAAA 60.006 52.632 14.44 0.00 0.00 3.28
150 151 1.735198 GTCCAACGCGTCGATCCAA 60.735 57.895 14.44 0.00 0.00 3.53
151 152 2.126228 GTCCAACGCGTCGATCCA 60.126 61.111 14.44 0.00 0.00 3.41
152 153 2.884207 GGTCCAACGCGTCGATCC 60.884 66.667 14.44 10.01 0.00 3.36
153 154 2.931713 ATCGGTCCAACGCGTCGATC 62.932 60.000 22.23 15.88 36.01 3.69
154 155 2.552585 AATCGGTCCAACGCGTCGAT 62.553 55.000 22.23 22.23 41.49 3.59
155 156 2.752322 AAATCGGTCCAACGCGTCGA 62.752 55.000 19.94 19.94 0.00 4.20
156 157 1.893168 AAAATCGGTCCAACGCGTCG 61.893 55.000 14.44 12.14 0.00 5.12
157 158 0.236449 AAAAATCGGTCCAACGCGTC 59.764 50.000 14.44 0.00 0.00 5.19
158 159 0.236449 GAAAAATCGGTCCAACGCGT 59.764 50.000 5.58 5.58 0.00 6.01
159 160 0.515564 AGAAAAATCGGTCCAACGCG 59.484 50.000 3.53 3.53 0.00 6.01
160 161 1.265905 ACAGAAAAATCGGTCCAACGC 59.734 47.619 0.00 0.00 0.00 4.84
161 162 3.495377 TGTACAGAAAAATCGGTCCAACG 59.505 43.478 0.00 0.00 0.00 4.10
162 163 5.390613 CATGTACAGAAAAATCGGTCCAAC 58.609 41.667 0.33 0.00 0.00 3.77
163 164 4.083003 GCATGTACAGAAAAATCGGTCCAA 60.083 41.667 0.33 0.00 0.00 3.53
164 165 3.438781 GCATGTACAGAAAAATCGGTCCA 59.561 43.478 0.33 0.00 0.00 4.02
165 166 3.181500 GGCATGTACAGAAAAATCGGTCC 60.181 47.826 0.33 0.00 0.00 4.46
166 167 3.485216 CGGCATGTACAGAAAAATCGGTC 60.485 47.826 0.33 0.00 0.00 4.79
167 168 2.418628 CGGCATGTACAGAAAAATCGGT 59.581 45.455 0.33 0.00 0.00 4.69
168 169 2.675844 TCGGCATGTACAGAAAAATCGG 59.324 45.455 0.33 0.00 0.00 4.18
169 170 3.485216 GGTCGGCATGTACAGAAAAATCG 60.485 47.826 0.33 0.00 0.00 3.34
170 171 3.689649 AGGTCGGCATGTACAGAAAAATC 59.310 43.478 0.33 0.00 0.00 2.17
171 172 3.686016 AGGTCGGCATGTACAGAAAAAT 58.314 40.909 0.33 0.00 0.00 1.82
172 173 3.134574 AGGTCGGCATGTACAGAAAAA 57.865 42.857 0.33 0.00 0.00 1.94
173 174 2.851263 AGGTCGGCATGTACAGAAAA 57.149 45.000 0.33 0.00 0.00 2.29
174 175 3.965379 TTAGGTCGGCATGTACAGAAA 57.035 42.857 0.33 0.00 0.00 2.52
175 176 3.007074 TGTTTAGGTCGGCATGTACAGAA 59.993 43.478 0.33 0.00 0.00 3.02
176 177 2.563620 TGTTTAGGTCGGCATGTACAGA 59.436 45.455 0.33 0.00 0.00 3.41
177 178 2.967362 TGTTTAGGTCGGCATGTACAG 58.033 47.619 0.33 0.00 0.00 2.74
178 179 3.404224 TTGTTTAGGTCGGCATGTACA 57.596 42.857 0.00 0.00 0.00 2.90
179 180 3.423907 CGTTTGTTTAGGTCGGCATGTAC 60.424 47.826 0.00 0.00 0.00 2.90
180 181 2.737783 CGTTTGTTTAGGTCGGCATGTA 59.262 45.455 0.00 0.00 0.00 2.29
181 182 1.533731 CGTTTGTTTAGGTCGGCATGT 59.466 47.619 0.00 0.00 0.00 3.21
182 183 1.727857 GCGTTTGTTTAGGTCGGCATG 60.728 52.381 0.00 0.00 0.00 4.06
183 184 0.519961 GCGTTTGTTTAGGTCGGCAT 59.480 50.000 0.00 0.00 0.00 4.40
184 185 1.833434 CGCGTTTGTTTAGGTCGGCA 61.833 55.000 0.00 0.00 0.00 5.69
185 186 1.154543 CGCGTTTGTTTAGGTCGGC 60.155 57.895 0.00 0.00 0.00 5.54
186 187 1.154543 GCGCGTTTGTTTAGGTCGG 60.155 57.895 8.43 0.00 0.00 4.79
187 188 1.506277 CGCGCGTTTGTTTAGGTCG 60.506 57.895 24.19 0.00 0.00 4.79
188 189 0.720173 CACGCGCGTTTGTTTAGGTC 60.720 55.000 35.90 0.00 0.00 3.85
189 190 1.277440 CACGCGCGTTTGTTTAGGT 59.723 52.632 35.90 4.11 0.00 3.08
190 191 0.507785 TACACGCGCGTTTGTTTAGG 59.492 50.000 35.90 21.68 0.00 2.69
191 192 1.572950 GTACACGCGCGTTTGTTTAG 58.427 50.000 35.90 22.49 0.00 1.85
192 193 0.111791 CGTACACGCGCGTTTGTTTA 60.112 50.000 35.90 16.12 0.00 2.01
193 194 1.366727 CGTACACGCGCGTTTGTTT 60.367 52.632 35.90 17.19 0.00 2.83
194 195 1.750572 TTCGTACACGCGCGTTTGTT 61.751 50.000 35.90 19.83 39.60 2.83
195 196 1.750572 TTTCGTACACGCGCGTTTGT 61.751 50.000 35.90 30.05 39.60 2.83
196 197 0.449831 ATTTCGTACACGCGCGTTTG 60.450 50.000 35.90 25.75 39.60 2.93
197 198 1.058129 CTATTTCGTACACGCGCGTTT 59.942 47.619 35.90 30.49 39.60 3.60
198 199 0.636733 CTATTTCGTACACGCGCGTT 59.363 50.000 35.90 25.48 39.60 4.84
199 200 0.179192 TCTATTTCGTACACGCGCGT 60.179 50.000 32.73 32.73 39.60 6.01
200 201 1.118033 ATCTATTTCGTACACGCGCG 58.882 50.000 30.96 30.96 39.60 6.86
201 202 1.120199 CGATCTATTTCGTACACGCGC 59.880 52.381 5.73 0.00 39.60 6.86
202 203 1.120199 GCGATCTATTTCGTACACGCG 59.880 52.381 3.53 3.53 41.16 6.01
203 204 1.450905 GGCGATCTATTTCGTACACGC 59.549 52.381 0.00 0.00 41.16 5.34
204 205 1.707117 CGGCGATCTATTTCGTACACG 59.293 52.381 0.00 0.00 41.16 4.49
205 206 1.450905 GCGGCGATCTATTTCGTACAC 59.549 52.381 12.98 0.00 41.16 2.90
206 207 1.762419 GCGGCGATCTATTTCGTACA 58.238 50.000 12.98 0.00 41.16 2.90
207 208 0.701303 CGCGGCGATCTATTTCGTAC 59.299 55.000 19.16 0.00 41.16 3.67
208 209 0.308684 ACGCGGCGATCTATTTCGTA 59.691 50.000 30.94 0.00 41.16 3.43
209 210 0.526954 AACGCGGCGATCTATTTCGT 60.527 50.000 30.94 4.86 41.16 3.85
210 211 0.111704 CAACGCGGCGATCTATTTCG 60.112 55.000 30.94 4.09 41.99 3.46
211 212 0.232303 CCAACGCGGCGATCTATTTC 59.768 55.000 30.94 0.00 0.00 2.17
212 213 0.179094 TCCAACGCGGCGATCTATTT 60.179 50.000 30.94 8.75 33.14 1.40
213 214 0.597637 CTCCAACGCGGCGATCTATT 60.598 55.000 30.94 9.57 33.14 1.73
214 215 1.007271 CTCCAACGCGGCGATCTAT 60.007 57.895 30.94 2.30 33.14 1.98
215 216 1.940883 AACTCCAACGCGGCGATCTA 61.941 55.000 30.94 10.49 33.14 1.98
216 217 3.296709 AACTCCAACGCGGCGATCT 62.297 57.895 30.94 10.01 33.14 2.75
217 218 2.813908 AACTCCAACGCGGCGATC 60.814 61.111 30.94 0.00 33.14 3.69
218 219 3.118454 CAACTCCAACGCGGCGAT 61.118 61.111 30.94 15.67 33.14 4.58
221 222 4.090057 GAGCAACTCCAACGCGGC 62.090 66.667 12.47 0.36 33.14 6.53
222 223 0.669318 TAAGAGCAACTCCAACGCGG 60.669 55.000 12.47 0.00 0.00 6.46
223 224 0.716108 CTAAGAGCAACTCCAACGCG 59.284 55.000 3.53 3.53 0.00 6.01
224 225 1.079503 CCTAAGAGCAACTCCAACGC 58.920 55.000 0.00 0.00 0.00 4.84
225 226 1.726853 CCCTAAGAGCAACTCCAACG 58.273 55.000 0.00 0.00 0.00 4.10
226 227 1.271379 TGCCCTAAGAGCAACTCCAAC 60.271 52.381 0.00 0.00 37.28 3.77
227 228 1.064003 TGCCCTAAGAGCAACTCCAA 58.936 50.000 0.00 0.00 37.28 3.53
228 229 1.289160 ATGCCCTAAGAGCAACTCCA 58.711 50.000 0.00 0.00 44.83 3.86
229 230 3.560636 TTATGCCCTAAGAGCAACTCC 57.439 47.619 0.00 0.00 44.83 3.85
230 231 7.568199 TTAAATTATGCCCTAAGAGCAACTC 57.432 36.000 0.00 0.00 44.83 3.01
231 232 8.539117 AATTAAATTATGCCCTAAGAGCAACT 57.461 30.769 0.00 0.00 44.83 3.16
232 233 7.867909 GGAATTAAATTATGCCCTAAGAGCAAC 59.132 37.037 0.00 0.00 44.83 4.17
233 234 7.563188 TGGAATTAAATTATGCCCTAAGAGCAA 59.437 33.333 0.00 0.00 44.83 3.91
234 235 7.066142 TGGAATTAAATTATGCCCTAAGAGCA 58.934 34.615 0.00 0.00 45.94 4.26
235 236 7.524717 TGGAATTAAATTATGCCCTAAGAGC 57.475 36.000 0.00 0.00 0.00 4.09
240 241 8.788806 CGTTGTATGGAATTAAATTATGCCCTA 58.211 33.333 0.00 0.00 0.00 3.53
241 242 7.504238 TCGTTGTATGGAATTAAATTATGCCCT 59.496 33.333 0.00 0.00 0.00 5.19
242 243 7.653647 TCGTTGTATGGAATTAAATTATGCCC 58.346 34.615 0.00 0.00 0.00 5.36
243 244 7.807907 CCTCGTTGTATGGAATTAAATTATGCC 59.192 37.037 0.00 0.00 0.00 4.40
244 245 7.807907 CCCTCGTTGTATGGAATTAAATTATGC 59.192 37.037 0.00 0.00 0.00 3.14
245 246 7.807907 GCCCTCGTTGTATGGAATTAAATTATG 59.192 37.037 0.00 0.00 0.00 1.90
246 247 7.504238 TGCCCTCGTTGTATGGAATTAAATTAT 59.496 33.333 0.00 0.00 0.00 1.28
247 248 6.829298 TGCCCTCGTTGTATGGAATTAAATTA 59.171 34.615 0.00 0.00 0.00 1.40
248 249 5.654650 TGCCCTCGTTGTATGGAATTAAATT 59.345 36.000 0.00 0.00 0.00 1.82
249 250 5.067283 GTGCCCTCGTTGTATGGAATTAAAT 59.933 40.000 0.00 0.00 0.00 1.40
250 251 4.396790 GTGCCCTCGTTGTATGGAATTAAA 59.603 41.667 0.00 0.00 0.00 1.52
251 252 3.942748 GTGCCCTCGTTGTATGGAATTAA 59.057 43.478 0.00 0.00 0.00 1.40
252 253 3.537580 GTGCCCTCGTTGTATGGAATTA 58.462 45.455 0.00 0.00 0.00 1.40
253 254 2.365582 GTGCCCTCGTTGTATGGAATT 58.634 47.619 0.00 0.00 0.00 2.17
254 255 1.408266 GGTGCCCTCGTTGTATGGAAT 60.408 52.381 0.00 0.00 0.00 3.01
255 256 0.035820 GGTGCCCTCGTTGTATGGAA 60.036 55.000 0.00 0.00 0.00 3.53
256 257 1.600107 GGTGCCCTCGTTGTATGGA 59.400 57.895 0.00 0.00 0.00 3.41
257 258 1.813753 CGGTGCCCTCGTTGTATGG 60.814 63.158 0.00 0.00 0.00 2.74
258 259 1.813753 CCGGTGCCCTCGTTGTATG 60.814 63.158 0.00 0.00 0.00 2.39
259 260 2.582436 CCGGTGCCCTCGTTGTAT 59.418 61.111 0.00 0.00 0.00 2.29
260 261 4.382320 GCCGGTGCCCTCGTTGTA 62.382 66.667 1.90 0.00 0.00 2.41
269 270 3.683587 GAATCTTTGCGCCGGTGCC 62.684 63.158 35.49 18.86 0.00 5.01
270 271 2.202479 GAATCTTTGCGCCGGTGC 60.202 61.111 32.83 32.83 0.00 5.01
271 272 1.656818 ATGGAATCTTTGCGCCGGTG 61.657 55.000 11.67 11.67 0.00 4.94
272 273 1.376609 GATGGAATCTTTGCGCCGGT 61.377 55.000 4.18 0.00 41.17 5.28
273 274 1.356624 GATGGAATCTTTGCGCCGG 59.643 57.895 4.18 0.00 41.17 6.13
283 284 2.096496 CACAAACTGCCGAGATGGAATC 59.904 50.000 0.00 0.00 46.04 2.52
284 285 2.086869 CACAAACTGCCGAGATGGAAT 58.913 47.619 0.00 0.00 42.00 3.01
285 286 1.522668 CACAAACTGCCGAGATGGAA 58.477 50.000 0.00 0.00 42.00 3.53
286 287 0.955428 GCACAAACTGCCGAGATGGA 60.955 55.000 0.00 0.00 42.00 3.41
287 288 1.503542 GCACAAACTGCCGAGATGG 59.496 57.895 0.00 0.00 40.42 3.51
288 289 1.133253 CGCACAAACTGCCGAGATG 59.867 57.895 0.00 0.00 43.84 2.90
289 290 2.034879 CCGCACAAACTGCCGAGAT 61.035 57.895 0.00 0.00 43.84 2.75
290 291 2.664851 CCGCACAAACTGCCGAGA 60.665 61.111 0.00 0.00 43.84 4.04
291 292 2.954753 GACCGCACAAACTGCCGAG 61.955 63.158 0.00 0.00 43.84 4.63
292 293 2.089887 TAGACCGCACAAACTGCCGA 62.090 55.000 0.00 0.00 43.84 5.54
293 294 1.626654 CTAGACCGCACAAACTGCCG 61.627 60.000 0.00 0.00 43.84 5.69
294 295 1.912371 GCTAGACCGCACAAACTGCC 61.912 60.000 0.00 0.00 43.84 4.85
295 296 0.951040 AGCTAGACCGCACAAACTGC 60.951 55.000 0.00 0.00 43.21 4.40
296 297 1.195448 CAAGCTAGACCGCACAAACTG 59.805 52.381 0.00 0.00 0.00 3.16
297 298 1.512926 CAAGCTAGACCGCACAAACT 58.487 50.000 0.00 0.00 0.00 2.66
298 299 0.110192 GCAAGCTAGACCGCACAAAC 60.110 55.000 0.00 0.00 0.00 2.93
299 300 1.234615 GGCAAGCTAGACCGCACAAA 61.235 55.000 0.00 0.00 0.00 2.83
300 301 1.671054 GGCAAGCTAGACCGCACAA 60.671 57.895 0.00 0.00 0.00 3.33
301 302 2.047274 GGCAAGCTAGACCGCACA 60.047 61.111 0.00 0.00 0.00 4.57
302 303 2.103042 CAGGCAAGCTAGACCGCAC 61.103 63.158 0.00 0.00 0.00 5.34
303 304 2.265739 CAGGCAAGCTAGACCGCA 59.734 61.111 0.00 0.00 0.00 5.69
304 305 2.317149 ATCCAGGCAAGCTAGACCGC 62.317 60.000 0.00 0.00 0.00 5.68
305 306 0.179000 AATCCAGGCAAGCTAGACCG 59.821 55.000 0.00 0.00 0.00 4.79
306 307 1.475930 GGAATCCAGGCAAGCTAGACC 60.476 57.143 0.00 0.00 0.00 3.85
307 308 1.210478 TGGAATCCAGGCAAGCTAGAC 59.790 52.381 0.00 0.00 0.00 2.59
308 309 1.210478 GTGGAATCCAGGCAAGCTAGA 59.790 52.381 0.27 0.00 32.34 2.43
309 310 1.673168 GTGGAATCCAGGCAAGCTAG 58.327 55.000 0.27 0.00 32.34 3.42
310 311 0.255890 GGTGGAATCCAGGCAAGCTA 59.744 55.000 0.27 0.00 32.34 3.32
311 312 1.000396 GGTGGAATCCAGGCAAGCT 60.000 57.895 0.27 0.00 32.34 3.74
312 313 2.409870 CGGTGGAATCCAGGCAAGC 61.410 63.158 0.27 0.00 32.34 4.01
313 314 1.750399 CCGGTGGAATCCAGGCAAG 60.750 63.158 0.27 0.00 32.34 4.01
314 315 2.354729 CCGGTGGAATCCAGGCAA 59.645 61.111 0.27 0.00 32.34 4.52
315 316 3.727258 CCCGGTGGAATCCAGGCA 61.727 66.667 0.27 0.00 32.34 4.75
316 317 2.682582 GATCCCGGTGGAATCCAGGC 62.683 65.000 0.27 0.00 45.98 4.85
317 318 1.056700 AGATCCCGGTGGAATCCAGG 61.057 60.000 0.27 0.60 45.98 4.45
318 319 0.839946 AAGATCCCGGTGGAATCCAG 59.160 55.000 0.27 0.00 45.98 3.86
319 320 0.837272 GAAGATCCCGGTGGAATCCA 59.163 55.000 0.00 0.00 45.98 3.41
320 321 1.132500 AGAAGATCCCGGTGGAATCC 58.868 55.000 0.00 0.00 45.98 3.01
321 322 1.811941 GCAGAAGATCCCGGTGGAATC 60.812 57.143 0.00 0.00 45.98 2.52
322 323 0.181350 GCAGAAGATCCCGGTGGAAT 59.819 55.000 0.00 0.00 45.98 3.01
323 324 1.602237 GCAGAAGATCCCGGTGGAA 59.398 57.895 0.00 0.00 45.98 3.53
357 358 1.101049 CCAACCACCGAGCAAGTGTT 61.101 55.000 0.00 0.00 33.20 3.32
361 362 2.317609 CGACCAACCACCGAGCAAG 61.318 63.158 0.00 0.00 0.00 4.01
388 389 5.006552 GCAAAAAGAAATTGTTAGTGCAGCA 59.993 36.000 0.00 0.00 0.00 4.41
397 398 6.593382 TGTTAGTGCAGCAAAAAGAAATTGTT 59.407 30.769 0.00 0.00 0.00 2.83
398 399 6.105333 TGTTAGTGCAGCAAAAAGAAATTGT 58.895 32.000 0.00 0.00 0.00 2.71
399 400 6.586868 TGTTAGTGCAGCAAAAAGAAATTG 57.413 33.333 0.00 0.00 0.00 2.32
400 401 7.495279 TGAATGTTAGTGCAGCAAAAAGAAATT 59.505 29.630 0.00 0.00 0.00 1.82
401 402 6.985645 TGAATGTTAGTGCAGCAAAAAGAAAT 59.014 30.769 0.00 0.00 0.00 2.17
402 403 6.336566 TGAATGTTAGTGCAGCAAAAAGAAA 58.663 32.000 0.00 0.00 0.00 2.52
404 405 5.512753 TGAATGTTAGTGCAGCAAAAAGA 57.487 34.783 0.00 0.00 0.00 2.52
405 406 5.050837 GGTTGAATGTTAGTGCAGCAAAAAG 60.051 40.000 0.00 0.00 0.00 2.27
406 407 4.808364 GGTTGAATGTTAGTGCAGCAAAAA 59.192 37.500 0.00 0.00 0.00 1.94
407 408 4.099266 AGGTTGAATGTTAGTGCAGCAAAA 59.901 37.500 0.00 0.00 0.00 2.44
408 409 3.636300 AGGTTGAATGTTAGTGCAGCAAA 59.364 39.130 0.00 0.00 0.00 3.68
409 410 3.221771 AGGTTGAATGTTAGTGCAGCAA 58.778 40.909 0.00 0.00 0.00 3.91
445 446 5.862860 GCACTACTAGTCCTAGAACAAACAC 59.137 44.000 0.00 0.00 36.97 3.32
540 556 2.224185 TGTTGACGGCTTTCTTCTAGCA 60.224 45.455 0.00 0.00 40.42 3.49
642 691 9.778741 AACTGAATACTACAAGTCATGAAGAAA 57.221 29.630 0.00 0.00 0.00 2.52
657 706 9.787435 ACAACTTCATGGTAAAACTGAATACTA 57.213 29.630 0.00 0.00 0.00 1.82
658 707 8.691661 ACAACTTCATGGTAAAACTGAATACT 57.308 30.769 0.00 0.00 0.00 2.12
666 715 5.831997 AGCAAGACAACTTCATGGTAAAAC 58.168 37.500 0.00 0.00 31.99 2.43
698 747 1.622811 GGCATGATGTCTCTCCTAGGG 59.377 57.143 9.46 0.00 0.00 3.53
806 1245 0.609662 TAAACGAGGTGCCCCTGTAC 59.390 55.000 0.00 0.00 42.86 2.90
821 1260 3.889196 TTTGATGAGTGGCACGTAAAC 57.111 42.857 12.71 5.09 0.00 2.01
823 1262 3.006940 GGATTTGATGAGTGGCACGTAA 58.993 45.455 12.71 1.96 0.00 3.18
824 1263 2.627945 GGATTTGATGAGTGGCACGTA 58.372 47.619 12.71 5.61 0.00 3.57
827 1266 0.734889 CGGGATTTGATGAGTGGCAC 59.265 55.000 10.29 10.29 0.00 5.01
828 1267 1.031571 GCGGGATTTGATGAGTGGCA 61.032 55.000 0.00 0.00 0.00 4.92
831 1270 1.019673 CAGGCGGGATTTGATGAGTG 58.980 55.000 0.00 0.00 0.00 3.51
832 1271 0.749454 GCAGGCGGGATTTGATGAGT 60.749 55.000 0.00 0.00 0.00 3.41
1008 1919 0.808125 TGTCTGTTGGTGTGTGTTGC 59.192 50.000 0.00 0.00 0.00 4.17
1024 1935 1.074752 CTCTTTCTTGCGGCTCTGTC 58.925 55.000 0.00 0.00 0.00 3.51
1032 1943 1.062294 GATGCTCTGCTCTTTCTTGCG 59.938 52.381 0.00 0.00 0.00 4.85
1033 1944 2.082231 TGATGCTCTGCTCTTTCTTGC 58.918 47.619 0.00 0.00 0.00 4.01
1061 1981 1.098869 CTCTCTCTGTCGCCTGCTAA 58.901 55.000 0.00 0.00 0.00 3.09
1066 1986 0.908910 TCTCTCTCTCTCTGTCGCCT 59.091 55.000 0.00 0.00 0.00 5.52
1067 1987 1.134521 TCTCTCTCTCTCTCTGTCGCC 60.135 57.143 0.00 0.00 0.00 5.54
1098 2018 2.370519 TGTGTTGCTAGGTGGCTAAAGA 59.629 45.455 0.00 0.00 0.00 2.52
1102 2022 0.323629 GGTGTGTTGCTAGGTGGCTA 59.676 55.000 0.00 0.00 0.00 3.93
1306 2242 2.363147 GGGTCCGTCTCCAGCTCT 60.363 66.667 0.00 0.00 0.00 4.09
1513 2449 4.524318 TCGCGGGCGAAATCCTCC 62.524 66.667 14.01 0.00 46.01 4.30
1561 2523 5.424252 TCAGAATTTACGGAGGGTAATCAGT 59.576 40.000 0.00 0.00 40.64 3.41
1761 2784 2.673833 GCGTGTCAAGTAGTACAGCTT 58.326 47.619 2.52 0.00 0.00 3.74
1764 2787 2.327081 ACGCGTGTCAAGTAGTACAG 57.673 50.000 12.93 0.00 0.00 2.74
1767 2790 3.934579 TCATCTACGCGTGTCAAGTAGTA 59.065 43.478 24.59 0.00 38.99 1.82
1768 2791 2.745821 TCATCTACGCGTGTCAAGTAGT 59.254 45.455 24.59 0.00 38.99 2.73
1893 3107 5.967088 ACGAAAAGCTTAGCTCAGATAAGA 58.033 37.500 14.08 0.00 38.25 2.10
1904 3118 4.810790 TCCAGAGAGAACGAAAAGCTTAG 58.189 43.478 0.00 0.00 0.00 2.18
1905 3119 4.866508 TCCAGAGAGAACGAAAAGCTTA 57.133 40.909 0.00 0.00 0.00 3.09
1917 3175 9.658799 CACTCTTAATGTATTTTTCCAGAGAGA 57.341 33.333 0.00 0.00 33.14 3.10
1957 3219 2.267174 ATGAACTTGCTGTGCTGAGT 57.733 45.000 0.00 0.00 0.00 3.41
1989 3252 1.295746 GGGACGAAAGGGAGACACC 59.704 63.158 0.00 0.00 38.08 4.16
2037 3300 6.875726 TCAACACGTACTACTACTGTCTACAT 59.124 38.462 0.00 0.00 0.00 2.29
2038 3301 6.223120 TCAACACGTACTACTACTGTCTACA 58.777 40.000 0.00 0.00 0.00 2.74
2039 3302 6.712241 TCAACACGTACTACTACTGTCTAC 57.288 41.667 0.00 0.00 0.00 2.59
2040 3303 7.912056 AATCAACACGTACTACTACTGTCTA 57.088 36.000 0.00 0.00 0.00 2.59
2041 3304 6.814506 AATCAACACGTACTACTACTGTCT 57.185 37.500 0.00 0.00 0.00 3.41
2042 3305 7.060403 GTGAAATCAACACGTACTACTACTGTC 59.940 40.741 0.00 0.00 0.00 3.51
2043 3306 6.860023 GTGAAATCAACACGTACTACTACTGT 59.140 38.462 0.00 0.00 0.00 3.55
2044 3307 6.859508 TGTGAAATCAACACGTACTACTACTG 59.140 38.462 0.00 0.00 40.61 2.74
2045 3308 6.973843 TGTGAAATCAACACGTACTACTACT 58.026 36.000 0.00 0.00 40.61 2.57
2046 3309 7.008992 GGATGTGAAATCAACACGTACTACTAC 59.991 40.741 0.00 0.00 40.61 2.73
2047 3310 7.031372 GGATGTGAAATCAACACGTACTACTA 58.969 38.462 0.00 0.00 40.61 1.82
2053 3316 3.435327 GCTGGATGTGAAATCAACACGTA 59.565 43.478 0.00 0.00 40.61 3.57
2057 3323 3.753815 TCAGCTGGATGTGAAATCAACA 58.246 40.909 15.13 0.00 0.00 3.33
2086 3352 1.718396 GGTAGACAGGTTACGTTGCC 58.282 55.000 0.00 0.00 0.00 4.52
2105 3375 4.214545 TGACTACCAAACCAATAGCAAACG 59.785 41.667 0.00 0.00 0.00 3.60
2107 3377 5.772672 ACATGACTACCAAACCAATAGCAAA 59.227 36.000 0.00 0.00 0.00 3.68
2119 3389 1.005512 ACGCGCACATGACTACCAA 60.006 52.632 5.73 0.00 0.00 3.67
2120 3390 1.445410 GACGCGCACATGACTACCA 60.445 57.895 5.73 0.00 0.00 3.25
2121 3391 2.505498 CGACGCGCACATGACTACC 61.505 63.158 5.73 0.00 0.00 3.18
2122 3392 1.730593 GACGACGCGCACATGACTAC 61.731 60.000 5.73 0.00 0.00 2.73
2123 3393 1.513373 GACGACGCGCACATGACTA 60.513 57.895 5.73 0.00 0.00 2.59
2135 3405 2.159934 GGTGGTTTGTAAATCGACGACG 60.160 50.000 0.00 0.00 41.26 5.12
2138 3408 2.544686 TGTGGTGGTTTGTAAATCGACG 59.455 45.455 0.00 0.00 0.00 5.12
2142 3412 3.305335 CCTGCTGTGGTGGTTTGTAAATC 60.305 47.826 0.00 0.00 0.00 2.17
2143 3413 2.627699 CCTGCTGTGGTGGTTTGTAAAT 59.372 45.455 0.00 0.00 0.00 1.40
2164 3434 1.009829 CAGGAGTGCCAACTAATCGC 58.990 55.000 0.00 0.00 36.52 4.58
2176 3446 8.343366 GCATCATAATATTATCATGCAGGAGTG 58.657 37.037 29.04 12.94 44.09 3.51
2213 3596 7.945033 TTGGTTCTTACTCAAAATGCAAATC 57.055 32.000 0.00 0.00 0.00 2.17
2218 3601 5.177511 GCCTTTTGGTTCTTACTCAAAATGC 59.822 40.000 10.43 10.43 41.15 3.56
2234 3617 5.841810 TCACATGTTTTCTTAGCCTTTTGG 58.158 37.500 0.00 0.00 44.18 3.28
2239 3622 6.321181 TCACTTTTCACATGTTTTCTTAGCCT 59.679 34.615 0.00 0.00 0.00 4.58
2269 3652 1.156736 CACCACGAGACCCATGTTTC 58.843 55.000 0.00 0.00 0.00 2.78
2321 3707 2.574369 TGGAAATATCGTGAAGGTGGGT 59.426 45.455 0.00 0.00 0.00 4.51
2348 3782 5.461526 GCAGAGGACAAAATTAAGTTGGAC 58.538 41.667 0.00 0.00 0.00 4.02
2359 3793 5.300792 AGAATTTTAACGGCAGAGGACAAAA 59.699 36.000 0.00 0.00 0.00 2.44
2464 3945 1.877367 GCCGGCCACGACAAATTTA 59.123 52.632 18.11 0.00 44.60 1.40
2637 4218 4.036804 GGCGATGCCGTGCACAAA 62.037 61.111 18.64 1.12 43.04 2.83
2690 5763 1.228367 GGCGAGGATTCCATGCCAT 60.228 57.895 25.21 0.00 42.87 4.40
2830 5916 1.554617 TCTGCAGGAATCACGGAATCA 59.445 47.619 15.13 0.00 0.00 2.57
2832 5918 2.787473 TTCTGCAGGAATCACGGAAT 57.213 45.000 15.13 0.00 0.00 3.01
2846 5940 2.405191 GAAAGCGCGGGATTCTGC 59.595 61.111 8.83 0.00 41.71 4.26
2892 5988 3.536956 AGATCGCAGTTAAAATCGGGA 57.463 42.857 0.00 0.00 0.00 5.14
2903 6006 5.185828 TCTGGTTGCATATATAGATCGCAGT 59.814 40.000 0.00 0.00 33.48 4.40
2913 6016 7.526041 TCCCAATTAACTCTGGTTGCATATAT 58.474 34.615 0.00 0.00 36.92 0.86
2922 6025 8.485578 TGTTTTTAATCCCAATTAACTCTGGT 57.514 30.769 0.00 0.00 37.13 4.00
2997 6130 1.961277 GCTGTTGTCCACCACCTCG 60.961 63.158 0.00 0.00 0.00 4.63
3033 6166 2.686915 GAGCTTGAGCATGCCTATGTTT 59.313 45.455 15.66 0.00 45.16 2.83
3039 6172 2.823147 GCGAGCTTGAGCATGCCT 60.823 61.111 15.66 3.13 45.16 4.75
3161 6294 3.499737 GCAGCCCGTTCATCACCG 61.500 66.667 0.00 0.00 0.00 4.94
3396 6529 3.610619 CTCCATGACGGCTGCCACA 62.611 63.158 20.29 17.71 33.14 4.17
3402 6535 0.537188 CCTTGTACTCCATGACGGCT 59.463 55.000 0.00 0.00 33.14 5.52
3456 6589 3.743091 CTCGTCGAGCCGCTCCTTC 62.743 68.421 14.85 4.69 0.00 3.46
3519 6652 1.610624 CCAGTGCAGTTGAACCCGTAT 60.611 52.381 0.00 0.00 0.00 3.06
3608 6741 0.106469 ACTCATCTCCGGCTGAGCTA 60.106 55.000 21.36 0.00 42.12 3.32
3625 6758 2.295253 GCACTACATACTTGCGGACT 57.705 50.000 0.00 0.00 0.00 3.85
3633 6766 5.823209 TGTATGTACACGCACTACATACT 57.177 39.130 24.20 3.55 36.45 2.12
3634 6767 7.334749 CAAATGTATGTACACGCACTACATAC 58.665 38.462 20.59 20.59 39.30 2.39
3635 6768 6.477360 CCAAATGTATGTACACGCACTACATA 59.523 38.462 15.84 4.22 39.30 2.29
3636 6769 5.293324 CCAAATGTATGTACACGCACTACAT 59.707 40.000 11.55 11.55 39.30 2.29
3661 6794 1.065272 ACATTTCCCATGGCCAAATGC 60.065 47.619 29.85 0.00 39.95 3.56
3665 6798 1.350351 CCAAACATTTCCCATGGCCAA 59.650 47.619 10.96 0.63 0.00 4.52
3666 6799 0.982704 CCAAACATTTCCCATGGCCA 59.017 50.000 8.56 8.56 0.00 5.36
3667 6800 1.207811 CTCCAAACATTTCCCATGGCC 59.792 52.381 6.09 0.00 0.00 5.36
3668 6801 1.405933 GCTCCAAACATTTCCCATGGC 60.406 52.381 6.09 0.00 0.00 4.40
3669 6802 1.207811 GGCTCCAAACATTTCCCATGG 59.792 52.381 4.14 4.14 0.00 3.66
3672 6805 0.897863 CCGGCTCCAAACATTTCCCA 60.898 55.000 0.00 0.00 0.00 4.37
3913 7048 0.739813 GGGGATTCGTCGGAGTGTTG 60.740 60.000 0.00 0.00 0.00 3.33
3914 7049 1.595357 GGGGATTCGTCGGAGTGTT 59.405 57.895 0.00 0.00 0.00 3.32
3915 7050 2.356780 GGGGGATTCGTCGGAGTGT 61.357 63.158 0.00 0.00 0.00 3.55
3916 7051 1.614241 AAGGGGGATTCGTCGGAGTG 61.614 60.000 0.00 0.00 0.00 3.51
3917 7052 1.305887 AAGGGGGATTCGTCGGAGT 60.306 57.895 0.00 0.00 0.00 3.85
4110 7245 4.828925 GTCCTCCGGCTGCAGCTC 62.829 72.222 35.82 24.65 41.70 4.09
4120 7255 2.885861 CAACTCCTCCGTCCTCCG 59.114 66.667 0.00 0.00 0.00 4.63
4121 7256 1.827399 TTGCAACTCCTCCGTCCTCC 61.827 60.000 0.00 0.00 0.00 4.30
4122 7257 0.670854 GTTGCAACTCCTCCGTCCTC 60.671 60.000 22.36 0.00 0.00 3.71
4123 7258 1.371558 GTTGCAACTCCTCCGTCCT 59.628 57.895 22.36 0.00 0.00 3.85
4124 7259 1.671379 GGTTGCAACTCCTCCGTCC 60.671 63.158 27.64 5.36 0.00 4.79
4125 7260 2.027625 CGGTTGCAACTCCTCCGTC 61.028 63.158 27.64 8.66 36.99 4.79
4126 7261 2.030562 CGGTTGCAACTCCTCCGT 59.969 61.111 27.64 0.00 36.99 4.69
4127 7262 2.742372 CCGGTTGCAACTCCTCCG 60.742 66.667 27.64 21.60 40.72 4.63
4128 7263 3.056328 GCCGGTTGCAACTCCTCC 61.056 66.667 27.64 11.08 40.77 4.30
4129 7264 3.056328 GGCCGGTTGCAACTCCTC 61.056 66.667 27.64 14.49 43.89 3.71
4130 7265 3.884774 TGGCCGGTTGCAACTCCT 61.885 61.111 27.64 0.00 43.89 3.69
4131 7266 3.670377 GTGGCCGGTTGCAACTCC 61.670 66.667 27.64 23.79 41.06 3.85
4132 7267 4.025401 CGTGGCCGGTTGCAACTC 62.025 66.667 27.64 16.97 42.19 3.01
4133 7268 4.868116 ACGTGGCCGGTTGCAACT 62.868 61.111 27.64 3.64 42.19 3.16
4134 7269 4.322385 GACGTGGCCGGTTGCAAC 62.322 66.667 21.59 21.59 43.89 4.17
4135 7270 4.858680 TGACGTGGCCGGTTGCAA 62.859 61.111 1.90 0.00 43.89 4.08
4138 7273 4.308458 TCCTGACGTGGCCGGTTG 62.308 66.667 1.90 0.00 38.78 3.77
4139 7274 4.003788 CTCCTGACGTGGCCGGTT 62.004 66.667 1.90 0.00 38.78 4.44
4144 7279 4.687215 TGCAGCTCCTGACGTGGC 62.687 66.667 0.00 0.00 32.44 5.01
4145 7280 2.433838 CTGCAGCTCCTGACGTGG 60.434 66.667 0.00 0.00 32.44 4.94
4146 7281 3.117171 GCTGCAGCTCCTGACGTG 61.117 66.667 31.33 0.00 38.21 4.49
4147 7282 4.385405 GGCTGCAGCTCCTGACGT 62.385 66.667 35.82 0.00 41.70 4.34
4151 7286 4.834453 CTCCGGCTGCAGCTCCTG 62.834 72.222 35.82 22.59 41.70 3.86
4549 7712 4.481930 TGTGTTCTATTTCAGCAAACCG 57.518 40.909 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.