Multiple sequence alignment - TraesCS2B01G537700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G537700 chr2B 100.000 3152 0 0 1 3152 733078942 733075791 0.000000e+00 5821.0
1 TraesCS2B01G537700 chr2B 84.466 103 8 5 1399 1497 94099223 94099125 9.310000e-16 95.3
2 TraesCS2B01G537700 chr2A 92.446 2330 117 28 269 2565 735352036 735349733 0.000000e+00 3273.0
3 TraesCS2B01G537700 chr2A 97.388 268 7 0 1 268 70892350 70892083 1.030000e-124 457.0
4 TraesCS2B01G537700 chr2A 89.506 162 16 1 2562 2723 735345145 735344985 1.480000e-48 204.0
5 TraesCS2B01G537700 chr2A 83.168 101 17 0 1398 1498 60068979 60068879 3.350000e-15 93.5
6 TraesCS2B01G537700 chr2A 91.935 62 4 1 1445 1505 60195338 60195277 5.600000e-13 86.1
7 TraesCS2B01G537700 chr2D 92.598 1932 106 21 839 2756 602712775 602710867 0.000000e+00 2741.0
8 TraesCS2B01G537700 chr2D 88.292 1768 124 41 669 2390 601982692 601984422 0.000000e+00 2041.0
9 TraesCS2B01G537700 chr2D 97.026 269 7 1 1 268 413351248 413351516 4.790000e-123 451.0
10 TraesCS2B01G537700 chr2D 88.776 294 27 3 269 557 602713127 602712835 3.870000e-94 355.0
11 TraesCS2B01G537700 chr2D 85.149 101 13 2 1398 1497 60166894 60166795 5.560000e-18 102.0
12 TraesCS2B01G537700 chr2D 83.168 101 17 0 1398 1498 60064982 60064882 3.350000e-15 93.5
13 TraesCS2B01G537700 chr2D 96.296 54 2 0 1445 1498 60078912 60078859 4.330000e-14 89.8
14 TraesCS2B01G537700 chr6D 98.141 269 4 1 1 268 103042817 103042549 4.760000e-128 468.0
15 TraesCS2B01G537700 chr6D 72.917 432 89 24 1578 1998 90923950 90924364 1.190000e-24 124.0
16 TraesCS2B01G537700 chr6D 88.136 59 7 0 1173 1231 392513445 392513503 1.570000e-08 71.3
17 TraesCS2B01G537700 chr6B 88.802 384 40 3 2718 3100 444910602 444910983 4.760000e-128 468.0
18 TraesCS2B01G537700 chr6B 87.817 394 42 5 2718 3107 444921482 444921873 1.030000e-124 457.0
19 TraesCS2B01G537700 chr6B 97.398 269 6 1 1 268 578024813 578025081 1.030000e-124 457.0
20 TraesCS2B01G537700 chr6B 90.385 52 5 0 1173 1224 585902085 585902136 5.640000e-08 69.4
21 TraesCS2B01G537700 chr4D 97.761 268 5 1 1 267 483584491 483584224 7.970000e-126 460.0
22 TraesCS2B01G537700 chr4D 97.015 268 8 0 1 268 450709860 450710127 4.790000e-123 451.0
23 TraesCS2B01G537700 chr3B 97.761 268 5 1 1 267 14319151 14319418 7.970000e-126 460.0
24 TraesCS2B01G537700 chr3B 97.761 268 5 1 1 267 783048247 783047980 7.970000e-126 460.0
25 TraesCS2B01G537700 chr3D 87.990 383 41 5 2724 3105 576709977 576710355 6.200000e-122 448.0
26 TraesCS2B01G537700 chr3D 87.435 382 39 8 2725 3105 464065509 464065136 6.250000e-117 431.0
27 TraesCS2B01G537700 chr1D 96.642 268 9 0 1 268 396201362 396201629 2.230000e-121 446.0
28 TraesCS2B01G537700 chr1A 87.310 394 43 5 2727 3117 532712888 532712499 8.020000e-121 444.0
29 TraesCS2B01G537700 chr7B 87.664 381 41 5 2725 3105 704277779 704277405 3.730000e-119 438.0
30 TraesCS2B01G537700 chr7B 85.854 410 46 10 2707 3108 35314194 35313789 2.910000e-115 425.0
31 TraesCS2B01G537700 chr7B 72.540 437 90 24 1571 1998 503506887 503507302 7.140000e-22 115.0
32 TraesCS2B01G537700 chr7B 82.927 82 14 0 1729 1810 504243858 504243777 1.210000e-09 75.0
33 TraesCS2B01G537700 chr7D 87.113 388 43 6 2724 3108 232816948 232817331 1.740000e-117 433.0
34 TraesCS2B01G537700 chr7D 86.563 387 45 6 2724 3108 579249080 579249461 1.350000e-113 420.0
35 TraesCS2B01G537700 chr7D 90.244 82 8 0 1729 1810 478371011 478371092 1.200000e-19 108.0
36 TraesCS2B01G537700 chr7D 81.707 82 15 0 1729 1810 478571834 478571753 5.640000e-08 69.4
37 TraesCS2B01G537700 chr7D 94.444 36 2 0 1188 1223 151825014 151825049 4.390000e-04 56.5
38 TraesCS2B01G537700 chr7D 94.444 36 2 0 1188 1223 151931195 151931230 4.390000e-04 56.5
39 TraesCS2B01G537700 chr7A 79.412 102 12 9 2059 2156 517413735 517413639 2.620000e-06 63.9
40 TraesCS2B01G537700 chr7A 97.222 36 1 0 1188 1223 152507321 152507356 9.440000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G537700 chr2B 733075791 733078942 3151 True 5821 5821 100.000 1 3152 1 chr2B.!!$R2 3151
1 TraesCS2B01G537700 chr2A 735349733 735352036 2303 True 3273 3273 92.446 269 2565 1 chr2A.!!$R5 2296
2 TraesCS2B01G537700 chr2D 601982692 601984422 1730 False 2041 2041 88.292 669 2390 1 chr2D.!!$F2 1721
3 TraesCS2B01G537700 chr2D 602710867 602713127 2260 True 1548 2741 90.687 269 2756 2 chr2D.!!$R4 2487

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
32 33 0.034896 TTTCGAGCCTTGTCCAGGTC 59.965 55.0 0.0 0.0 46.07 3.85 F
1063 1110 0.095935 CATGGCGTTGCTCTTCTTCG 59.904 55.0 0.0 0.0 0.00 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1296 1343 0.670546 CACAGCCCTGTACAAGTCCG 60.671 60.0 0.00 0.0 42.83 4.79 R
2730 2811 0.039978 TTGTAACGCACGGGCAATTG 60.040 50.0 11.77 0.0 41.24 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.406001 CAAGAGTTTAAGGTTTCGAGCC 57.594 45.455 0.37 0.37 0.00 4.70
22 23 4.065789 CAAGAGTTTAAGGTTTCGAGCCT 58.934 43.478 4.96 4.96 38.11 4.58
23 24 4.353383 AGAGTTTAAGGTTTCGAGCCTT 57.647 40.909 21.63 21.63 46.90 4.35
24 25 4.065789 AGAGTTTAAGGTTTCGAGCCTTG 58.934 43.478 24.69 0.00 45.14 3.61
25 26 3.813724 GAGTTTAAGGTTTCGAGCCTTGT 59.186 43.478 24.69 12.17 45.14 3.16
26 27 3.813724 AGTTTAAGGTTTCGAGCCTTGTC 59.186 43.478 24.69 16.86 45.14 3.18
27 28 2.467566 TAAGGTTTCGAGCCTTGTCC 57.532 50.000 24.69 6.18 45.14 4.02
28 29 0.472471 AAGGTTTCGAGCCTTGTCCA 59.528 50.000 18.65 0.00 44.01 4.02
29 30 0.035458 AGGTTTCGAGCCTTGTCCAG 59.965 55.000 4.96 0.00 31.04 3.86
30 31 4.775163 AAGGTTTCGAGCCTTGTCCAGG 62.775 54.545 18.65 0.00 44.01 4.45
31 32 0.250338 GTTTCGAGCCTTGTCCAGGT 60.250 55.000 0.00 0.00 46.07 4.00
32 33 0.034896 TTTCGAGCCTTGTCCAGGTC 59.965 55.000 0.00 0.00 46.07 3.85
33 34 1.118965 TTCGAGCCTTGTCCAGGTCA 61.119 55.000 0.00 0.00 46.07 4.02
34 35 0.904865 TCGAGCCTTGTCCAGGTCAT 60.905 55.000 0.00 0.00 46.07 3.06
35 36 0.742281 CGAGCCTTGTCCAGGTCATG 60.742 60.000 0.00 0.00 46.07 3.07
36 37 0.326264 GAGCCTTGTCCAGGTCATGT 59.674 55.000 0.00 0.00 46.07 3.21
37 38 0.773644 AGCCTTGTCCAGGTCATGTT 59.226 50.000 0.00 0.00 46.07 2.71
38 39 1.168714 GCCTTGTCCAGGTCATGTTC 58.831 55.000 0.00 0.00 46.07 3.18
39 40 1.826385 CCTTGTCCAGGTCATGTTCC 58.174 55.000 0.00 0.00 37.99 3.62
40 41 1.073763 CCTTGTCCAGGTCATGTTCCA 59.926 52.381 11.03 0.00 37.99 3.53
41 42 2.291153 CCTTGTCCAGGTCATGTTCCAT 60.291 50.000 11.03 0.00 37.99 3.41
42 43 3.054434 CCTTGTCCAGGTCATGTTCCATA 60.054 47.826 11.03 0.00 37.99 2.74
43 44 4.567537 CCTTGTCCAGGTCATGTTCCATAA 60.568 45.833 11.03 0.00 37.99 1.90
44 45 4.649267 TGTCCAGGTCATGTTCCATAAA 57.351 40.909 11.03 0.00 0.00 1.40
45 46 4.588899 TGTCCAGGTCATGTTCCATAAAG 58.411 43.478 11.03 0.00 0.00 1.85
46 47 4.288366 TGTCCAGGTCATGTTCCATAAAGA 59.712 41.667 11.03 0.41 0.00 2.52
47 48 4.878397 GTCCAGGTCATGTTCCATAAAGAG 59.122 45.833 11.03 0.00 0.00 2.85
48 49 4.782691 TCCAGGTCATGTTCCATAAAGAGA 59.217 41.667 11.03 0.00 0.00 3.10
49 50 5.250543 TCCAGGTCATGTTCCATAAAGAGAA 59.749 40.000 11.03 0.00 0.00 2.87
50 51 6.069440 TCCAGGTCATGTTCCATAAAGAGAAT 60.069 38.462 11.03 0.00 0.00 2.40
51 52 6.261826 CCAGGTCATGTTCCATAAAGAGAATC 59.738 42.308 11.03 0.00 0.00 2.52
52 53 6.018425 CAGGTCATGTTCCATAAAGAGAATCG 60.018 42.308 11.03 0.00 42.67 3.34
53 54 5.817816 GGTCATGTTCCATAAAGAGAATCGT 59.182 40.000 0.00 0.00 42.67 3.73
54 55 6.238211 GGTCATGTTCCATAAAGAGAATCGTG 60.238 42.308 0.00 0.00 42.67 4.35
55 56 6.313905 GTCATGTTCCATAAAGAGAATCGTGT 59.686 38.462 0.00 0.00 42.67 4.49
56 57 6.535150 TCATGTTCCATAAAGAGAATCGTGTC 59.465 38.462 0.00 0.00 42.67 3.67
57 58 5.789521 TGTTCCATAAAGAGAATCGTGTCA 58.210 37.500 0.00 0.00 42.67 3.58
58 59 6.406370 TGTTCCATAAAGAGAATCGTGTCAT 58.594 36.000 0.00 0.00 42.67 3.06
59 60 6.535150 TGTTCCATAAAGAGAATCGTGTCATC 59.465 38.462 0.00 0.00 42.67 2.92
60 61 6.471233 TCCATAAAGAGAATCGTGTCATCT 57.529 37.500 0.00 0.00 42.67 2.90
61 62 6.276091 TCCATAAAGAGAATCGTGTCATCTG 58.724 40.000 0.00 0.00 42.67 2.90
62 63 5.050499 CCATAAAGAGAATCGTGTCATCTGC 60.050 44.000 0.00 0.00 42.67 4.26
63 64 3.599730 AAGAGAATCGTGTCATCTGCA 57.400 42.857 0.00 0.00 42.67 4.41
64 65 3.815856 AGAGAATCGTGTCATCTGCAT 57.184 42.857 0.00 0.00 42.67 3.96
65 66 4.926140 AGAGAATCGTGTCATCTGCATA 57.074 40.909 0.00 0.00 42.67 3.14
66 67 5.465532 AGAGAATCGTGTCATCTGCATAT 57.534 39.130 0.00 0.00 42.67 1.78
67 68 5.851720 AGAGAATCGTGTCATCTGCATATT 58.148 37.500 0.00 0.00 42.67 1.28
68 69 5.695363 AGAGAATCGTGTCATCTGCATATTG 59.305 40.000 0.00 0.00 42.67 1.90
69 70 4.212847 AGAATCGTGTCATCTGCATATTGC 59.787 41.667 0.00 0.00 45.29 3.56
84 85 5.683859 GCATATTGCAGAATAGAAAGACCG 58.316 41.667 0.00 0.00 44.26 4.79
85 86 5.683859 CATATTGCAGAATAGAAAGACCGC 58.316 41.667 0.00 0.00 0.00 5.68
86 87 2.024176 TGCAGAATAGAAAGACCGCC 57.976 50.000 0.00 0.00 0.00 6.13
87 88 1.277842 TGCAGAATAGAAAGACCGCCA 59.722 47.619 0.00 0.00 0.00 5.69
88 89 2.092968 TGCAGAATAGAAAGACCGCCAT 60.093 45.455 0.00 0.00 0.00 4.40
89 90 2.545946 GCAGAATAGAAAGACCGCCATC 59.454 50.000 0.00 0.00 0.00 3.51
90 91 3.134458 CAGAATAGAAAGACCGCCATCC 58.866 50.000 0.00 0.00 0.00 3.51
91 92 2.771943 AGAATAGAAAGACCGCCATCCA 59.228 45.455 0.00 0.00 0.00 3.41
92 93 2.622064 ATAGAAAGACCGCCATCCAC 57.378 50.000 0.00 0.00 0.00 4.02
93 94 1.271856 TAGAAAGACCGCCATCCACA 58.728 50.000 0.00 0.00 0.00 4.17
94 95 0.400213 AGAAAGACCGCCATCCACAA 59.600 50.000 0.00 0.00 0.00 3.33
95 96 0.804989 GAAAGACCGCCATCCACAAG 59.195 55.000 0.00 0.00 0.00 3.16
96 97 0.609131 AAAGACCGCCATCCACAAGG 60.609 55.000 0.00 0.00 0.00 3.61
97 98 1.779061 AAGACCGCCATCCACAAGGT 61.779 55.000 0.00 0.00 38.00 3.50
98 99 2.034066 ACCGCCATCCACAAGGTG 59.966 61.111 0.00 0.00 33.37 4.00
99 100 2.034066 CCGCCATCCACAAGGTGT 59.966 61.111 0.00 0.00 35.89 4.16
108 109 3.706055 CACAAGGTGTGGCACTACT 57.294 52.632 19.83 13.56 44.27 2.57
109 110 1.512926 CACAAGGTGTGGCACTACTC 58.487 55.000 19.83 9.20 44.27 2.59
110 111 0.396811 ACAAGGTGTGGCACTACTCC 59.603 55.000 19.83 14.84 34.40 3.85
111 112 0.687354 CAAGGTGTGGCACTACTCCT 59.313 55.000 19.83 16.69 44.15 3.69
112 113 0.687354 AAGGTGTGGCACTACTCCTG 59.313 55.000 19.83 0.00 42.13 3.86
113 114 1.376037 GGTGTGGCACTACTCCTGC 60.376 63.158 19.83 0.00 34.40 4.85
114 115 1.371183 GTGTGGCACTACTCCTGCA 59.629 57.895 19.83 0.00 36.27 4.41
115 116 0.250295 GTGTGGCACTACTCCTGCAA 60.250 55.000 19.83 0.00 36.27 4.08
116 117 0.692476 TGTGGCACTACTCCTGCAAT 59.308 50.000 19.83 0.00 36.27 3.56
117 118 1.339055 TGTGGCACTACTCCTGCAATC 60.339 52.381 19.83 0.00 36.27 2.67
118 119 0.253044 TGGCACTACTCCTGCAATCC 59.747 55.000 0.00 0.00 36.27 3.01
119 120 0.811616 GGCACTACTCCTGCAATCCG 60.812 60.000 0.00 0.00 36.27 4.18
120 121 0.811616 GCACTACTCCTGCAATCCGG 60.812 60.000 0.00 0.00 34.56 5.14
121 122 0.811616 CACTACTCCTGCAATCCGGC 60.812 60.000 0.00 0.00 0.00 6.13
122 123 1.227674 CTACTCCTGCAATCCGGCC 60.228 63.158 0.00 0.00 0.00 6.13
123 124 2.978452 CTACTCCTGCAATCCGGCCG 62.978 65.000 21.04 21.04 0.00 6.13
124 125 4.473520 CTCCTGCAATCCGGCCGT 62.474 66.667 26.12 2.55 0.00 5.68
125 126 4.467084 TCCTGCAATCCGGCCGTC 62.467 66.667 26.12 7.98 0.00 4.79
127 128 4.473520 CTGCAATCCGGCCGTCCT 62.474 66.667 26.12 4.77 0.00 3.85
128 129 4.776322 TGCAATCCGGCCGTCCTG 62.776 66.667 26.12 17.97 0.00 3.86
130 131 4.473520 CAATCCGGCCGTCCTGCT 62.474 66.667 26.12 0.00 0.00 4.24
131 132 3.717294 AATCCGGCCGTCCTGCTT 61.717 61.111 26.12 3.13 0.00 3.91
132 133 3.976701 AATCCGGCCGTCCTGCTTG 62.977 63.158 26.12 5.84 0.00 4.01
143 144 3.807538 CTGCTTGGCGCGCTCAAT 61.808 61.111 32.29 0.00 43.27 2.57
144 145 3.729906 CTGCTTGGCGCGCTCAATC 62.730 63.158 32.29 25.51 43.27 2.67
145 146 3.803082 GCTTGGCGCGCTCAATCA 61.803 61.111 32.29 17.41 0.00 2.57
146 147 2.402388 CTTGGCGCGCTCAATCAG 59.598 61.111 32.29 16.60 0.00 2.90
147 148 2.047370 TTGGCGCGCTCAATCAGA 60.047 55.556 32.29 8.83 0.00 3.27
148 149 1.638388 CTTGGCGCGCTCAATCAGAA 61.638 55.000 32.29 9.81 0.00 3.02
149 150 1.026182 TTGGCGCGCTCAATCAGAAT 61.026 50.000 32.29 0.00 0.00 2.40
150 151 0.179086 TGGCGCGCTCAATCAGAATA 60.179 50.000 32.29 0.00 0.00 1.75
151 152 0.510359 GGCGCGCTCAATCAGAATAG 59.490 55.000 32.29 0.00 0.00 1.73
152 153 0.110912 GCGCGCTCAATCAGAATAGC 60.111 55.000 26.67 0.00 0.00 2.97
153 154 0.510359 CGCGCTCAATCAGAATAGCC 59.490 55.000 5.56 0.00 0.00 3.93
154 155 1.586422 GCGCTCAATCAGAATAGCCA 58.414 50.000 0.00 0.00 0.00 4.75
155 156 1.942657 GCGCTCAATCAGAATAGCCAA 59.057 47.619 0.00 0.00 0.00 4.52
156 157 2.286654 GCGCTCAATCAGAATAGCCAAC 60.287 50.000 0.00 0.00 0.00 3.77
157 158 2.938451 CGCTCAATCAGAATAGCCAACA 59.062 45.455 0.00 0.00 0.00 3.33
158 159 3.562973 CGCTCAATCAGAATAGCCAACAT 59.437 43.478 0.00 0.00 0.00 2.71
159 160 4.554134 CGCTCAATCAGAATAGCCAACATG 60.554 45.833 0.00 0.00 0.00 3.21
160 161 4.337555 GCTCAATCAGAATAGCCAACATGT 59.662 41.667 0.00 0.00 0.00 3.21
161 162 5.505324 GCTCAATCAGAATAGCCAACATGTC 60.505 44.000 0.00 0.00 0.00 3.06
162 163 5.499313 TCAATCAGAATAGCCAACATGTCA 58.501 37.500 0.00 0.00 0.00 3.58
163 164 5.587443 TCAATCAGAATAGCCAACATGTCAG 59.413 40.000 0.00 0.00 0.00 3.51
164 165 3.273434 TCAGAATAGCCAACATGTCAGC 58.727 45.455 11.17 11.17 0.00 4.26
165 166 2.031314 CAGAATAGCCAACATGTCAGCG 59.969 50.000 12.80 0.00 0.00 5.18
166 167 2.093500 AGAATAGCCAACATGTCAGCGA 60.093 45.455 12.80 9.25 0.00 4.93
167 168 1.656652 ATAGCCAACATGTCAGCGAC 58.343 50.000 12.80 2.32 0.00 5.19
168 169 0.320050 TAGCCAACATGTCAGCGACA 59.680 50.000 12.53 12.53 46.90 4.35
169 170 0.534877 AGCCAACATGTCAGCGACAA 60.535 50.000 13.81 0.97 45.96 3.18
170 171 0.523072 GCCAACATGTCAGCGACAAT 59.477 50.000 13.81 4.78 45.96 2.71
171 172 1.730121 GCCAACATGTCAGCGACAATG 60.730 52.381 13.81 13.70 45.96 2.82
172 173 1.536766 CCAACATGTCAGCGACAATGT 59.463 47.619 13.81 14.17 45.96 2.71
173 174 2.030893 CCAACATGTCAGCGACAATGTT 60.031 45.455 19.93 19.93 45.96 2.71
174 175 3.188254 CCAACATGTCAGCGACAATGTTA 59.812 43.478 22.25 4.25 45.96 2.41
175 176 4.320129 CCAACATGTCAGCGACAATGTTAA 60.320 41.667 22.25 3.77 45.96 2.01
176 177 5.211454 CAACATGTCAGCGACAATGTTAAA 58.789 37.500 22.25 3.29 45.96 1.52
177 178 5.627499 ACATGTCAGCGACAATGTTAAAT 57.373 34.783 13.81 0.00 45.96 1.40
178 179 6.735678 ACATGTCAGCGACAATGTTAAATA 57.264 33.333 13.81 0.00 45.96 1.40
179 180 7.139896 ACATGTCAGCGACAATGTTAAATAA 57.860 32.000 13.81 0.00 45.96 1.40
180 181 7.021196 ACATGTCAGCGACAATGTTAAATAAC 58.979 34.615 13.81 0.00 45.96 1.89
181 182 6.546972 TGTCAGCGACAATGTTAAATAACA 57.453 33.333 8.34 8.34 42.54 2.41
195 196 8.279970 TGTTAAATAACATTGGAGACATGGAG 57.720 34.615 1.96 0.00 40.93 3.86
196 197 7.888021 TGTTAAATAACATTGGAGACATGGAGT 59.112 33.333 1.96 0.00 40.93 3.85
197 198 8.398665 GTTAAATAACATTGGAGACATGGAGTC 58.601 37.037 0.00 0.00 40.44 3.36
206 207 1.975327 ACATGGAGTCACCCTGTCG 59.025 57.895 0.00 0.00 42.34 4.35
207 208 0.832135 ACATGGAGTCACCCTGTCGT 60.832 55.000 0.00 0.00 42.34 4.34
208 209 1.182667 CATGGAGTCACCCTGTCGTA 58.817 55.000 0.00 0.00 38.00 3.43
209 210 1.548719 CATGGAGTCACCCTGTCGTAA 59.451 52.381 0.00 0.00 38.00 3.18
210 211 1.933021 TGGAGTCACCCTGTCGTAAT 58.067 50.000 0.00 0.00 38.00 1.89
211 212 1.822990 TGGAGTCACCCTGTCGTAATC 59.177 52.381 0.00 0.00 38.00 1.75
212 213 1.136500 GGAGTCACCCTGTCGTAATCC 59.864 57.143 0.00 0.00 0.00 3.01
213 214 2.100989 GAGTCACCCTGTCGTAATCCT 58.899 52.381 0.00 0.00 0.00 3.24
214 215 2.496470 GAGTCACCCTGTCGTAATCCTT 59.504 50.000 0.00 0.00 0.00 3.36
215 216 2.904434 AGTCACCCTGTCGTAATCCTTT 59.096 45.455 0.00 0.00 0.00 3.11
216 217 3.326880 AGTCACCCTGTCGTAATCCTTTT 59.673 43.478 0.00 0.00 0.00 2.27
217 218 4.070009 GTCACCCTGTCGTAATCCTTTTT 58.930 43.478 0.00 0.00 0.00 1.94
239 240 6.716934 TTTTGTTGAAAGTAATGGCCTACA 57.283 33.333 3.32 0.00 0.00 2.74
240 241 6.909550 TTTGTTGAAAGTAATGGCCTACAT 57.090 33.333 3.32 0.00 43.07 2.29
241 242 6.509418 TTGTTGAAAGTAATGGCCTACATC 57.491 37.500 3.32 2.91 39.40 3.06
242 243 5.565509 TGTTGAAAGTAATGGCCTACATCA 58.434 37.500 3.32 5.52 39.40 3.07
243 244 6.186957 TGTTGAAAGTAATGGCCTACATCAT 58.813 36.000 3.32 0.00 39.40 2.45
244 245 6.318648 TGTTGAAAGTAATGGCCTACATCATC 59.681 38.462 3.32 7.88 39.40 2.92
245 246 6.000246 TGAAAGTAATGGCCTACATCATCA 58.000 37.500 3.32 0.00 39.40 3.07
246 247 6.604171 TGAAAGTAATGGCCTACATCATCAT 58.396 36.000 3.32 0.00 39.40 2.45
247 248 7.062322 TGAAAGTAATGGCCTACATCATCATT 58.938 34.615 3.32 0.00 39.40 2.57
248 249 6.889301 AAGTAATGGCCTACATCATCATTG 57.111 37.500 3.32 0.00 39.40 2.82
249 250 6.191657 AGTAATGGCCTACATCATCATTGA 57.808 37.500 3.32 0.00 39.40 2.57
250 251 6.787170 AGTAATGGCCTACATCATCATTGAT 58.213 36.000 3.32 0.00 43.51 2.57
251 252 7.236529 AGTAATGGCCTACATCATCATTGATT 58.763 34.615 3.32 0.00 40.70 2.57
252 253 6.989155 AATGGCCTACATCATCATTGATTT 57.011 33.333 3.32 0.00 40.70 2.17
253 254 6.989155 ATGGCCTACATCATCATTGATTTT 57.011 33.333 3.32 0.00 40.70 1.82
254 255 6.151663 TGGCCTACATCATCATTGATTTTG 57.848 37.500 3.32 0.67 40.70 2.44
255 256 5.892686 TGGCCTACATCATCATTGATTTTGA 59.107 36.000 3.32 2.59 40.70 2.69
256 257 6.551975 TGGCCTACATCATCATTGATTTTGAT 59.448 34.615 3.32 4.55 40.70 2.57
258 259 6.866770 GCCTACATCATCATTGATTTTGATGG 59.133 38.462 23.07 17.13 46.75 3.51
259 260 6.866770 CCTACATCATCATTGATTTTGATGGC 59.133 38.462 23.07 0.00 46.75 4.40
260 261 5.607477 ACATCATCATTGATTTTGATGGCC 58.393 37.500 23.07 0.00 46.75 5.36
261 262 5.129650 ACATCATCATTGATTTTGATGGCCA 59.870 36.000 23.07 8.56 46.75 5.36
262 263 5.013568 TCATCATTGATTTTGATGGCCAC 57.986 39.130 8.16 2.36 46.75 5.01
263 264 4.466726 TCATCATTGATTTTGATGGCCACA 59.533 37.500 8.16 5.62 46.75 4.17
264 265 4.191033 TCATTGATTTTGATGGCCACAC 57.809 40.909 8.16 6.14 0.00 3.82
265 266 3.833650 TCATTGATTTTGATGGCCACACT 59.166 39.130 8.16 0.00 0.00 3.55
266 267 5.015515 TCATTGATTTTGATGGCCACACTA 58.984 37.500 8.16 0.00 0.00 2.74
267 268 4.782019 TTGATTTTGATGGCCACACTAC 57.218 40.909 8.16 0.00 0.00 2.73
333 334 1.151668 GCACATGATATCCAGCGTCC 58.848 55.000 0.00 0.00 0.00 4.79
398 404 7.606456 ACAATGGTTGTCTCGTGTATAAAATCT 59.394 33.333 0.00 0.00 40.56 2.40
465 476 1.904287 GGTACCAGCAAATCCACACA 58.096 50.000 7.15 0.00 0.00 3.72
481 492 3.689161 CCACACAGAAACAAGTTCACTCA 59.311 43.478 0.00 0.00 38.86 3.41
494 505 7.103641 ACAAGTTCACTCATATTCGTTGGTAT 58.896 34.615 0.00 0.00 0.00 2.73
495 506 7.606456 ACAAGTTCACTCATATTCGTTGGTATT 59.394 33.333 0.00 0.00 0.00 1.89
499 510 8.612619 GTTCACTCATATTCGTTGGTATTCAAT 58.387 33.333 0.00 0.00 37.73 2.57
537 552 6.257630 TGCATTTTAAAGCAAGAAAAGGTCAC 59.742 34.615 0.00 0.00 37.90 3.67
539 554 7.651704 GCATTTTAAAGCAAGAAAAGGTCACTA 59.348 33.333 0.00 0.00 30.93 2.74
564 579 6.657836 AAAAATAACGCGCTATAGTGTTCT 57.342 33.333 14.57 2.46 42.95 3.01
571 586 2.282820 GCGCTATAGTGTTCTGAGCAAC 59.717 50.000 14.57 0.00 35.24 4.17
572 587 2.531912 CGCTATAGTGTTCTGAGCAACG 59.468 50.000 5.07 0.00 35.24 4.10
589 604 6.128391 TGAGCAACGTCTCGCTAAATAAAATT 60.128 34.615 7.03 0.00 38.99 1.82
592 607 6.627671 GCAACGTCTCGCTAAATAAAATTAGG 59.372 38.462 0.00 0.00 34.20 2.69
647 662 7.755373 GCTTCGCTAAATTGAATTTTAAGGACT 59.245 33.333 8.60 0.00 33.82 3.85
650 665 6.021468 CGCTAAATTGAATTTTAAGGACTGCG 60.021 38.462 8.60 8.39 33.82 5.18
653 668 4.846779 TTGAATTTTAAGGACTGCGCTT 57.153 36.364 9.73 0.00 0.00 4.68
654 669 4.159377 TGAATTTTAAGGACTGCGCTTG 57.841 40.909 9.73 3.92 0.00 4.01
656 671 3.559238 ATTTTAAGGACTGCGCTTGTG 57.441 42.857 9.73 0.00 0.00 3.33
744 762 7.489894 AACAAACAAACATTGCAAAATTTCG 57.510 28.000 1.71 5.23 0.00 3.46
818 836 3.245229 TGGTAGAACATCATTTGGCTGGT 60.245 43.478 0.00 0.00 0.00 4.00
855 893 1.468506 TTGGGTACAGCGAGTCAGCA 61.469 55.000 9.14 0.00 40.15 4.41
885 923 7.817910 ACCGGAAATATCCCCTATAAATACA 57.182 36.000 9.46 0.00 43.37 2.29
934 975 1.959226 CCGGCACACACTACACACC 60.959 63.158 0.00 0.00 0.00 4.16
958 1001 6.366332 CCACACTACATACTCAAGTCAGAAAC 59.634 42.308 0.00 0.00 0.00 2.78
966 1009 7.655328 ACATACTCAAGTCAGAAACTTCTCTTG 59.345 37.037 11.81 11.81 45.28 3.02
967 1010 5.983540 ACTCAAGTCAGAAACTTCTCTTGT 58.016 37.500 15.26 1.93 45.28 3.16
968 1011 5.814705 ACTCAAGTCAGAAACTTCTCTTGTG 59.185 40.000 15.26 15.06 45.28 3.33
969 1012 5.734720 TCAAGTCAGAAACTTCTCTTGTGT 58.265 37.500 15.26 0.00 45.28 3.72
970 1013 6.873997 TCAAGTCAGAAACTTCTCTTGTGTA 58.126 36.000 15.26 1.44 45.28 2.90
971 1014 6.980978 TCAAGTCAGAAACTTCTCTTGTGTAG 59.019 38.462 15.26 0.00 45.28 2.74
975 1018 7.068348 AGTCAGAAACTTCTCTTGTGTAGTGTA 59.932 37.037 0.00 0.00 33.03 2.90
995 1042 2.156098 ACGTAGCTAGCTCTAGGCATC 58.844 52.381 23.26 2.24 44.79 3.91
1000 1047 3.237746 AGCTAGCTCTAGGCATCATCAA 58.762 45.455 12.68 0.00 44.79 2.57
1001 1048 3.839490 AGCTAGCTCTAGGCATCATCAAT 59.161 43.478 12.68 0.00 44.79 2.57
1002 1049 3.933955 GCTAGCTCTAGGCATCATCAATG 59.066 47.826 7.70 0.00 44.79 2.82
1003 1050 4.563168 GCTAGCTCTAGGCATCATCAATGT 60.563 45.833 7.70 0.00 44.79 2.71
1004 1051 4.005487 AGCTCTAGGCATCATCAATGTC 57.995 45.455 6.07 0.00 44.79 3.06
1005 1052 2.735663 GCTCTAGGCATCATCAATGTCG 59.264 50.000 0.00 0.00 45.06 4.35
1063 1110 0.095935 CATGGCGTTGCTCTTCTTCG 59.904 55.000 0.00 0.00 0.00 3.79
1078 1125 3.576932 TTCGCCGCGGCTCTTGTTA 62.577 57.895 43.60 19.88 39.32 2.41
1296 1343 0.252197 AGGACTAACCATTGACCGGC 59.748 55.000 0.00 0.00 42.04 6.13
1320 1367 2.107041 TTGTACAGGGCTGTGACGGG 62.107 60.000 0.00 0.00 44.63 5.28
1452 1499 3.872603 AAGGTGGTGTCCTGCGCA 61.873 61.111 10.98 10.98 37.93 6.09
1516 1563 1.135575 GCAGCACCATACAAGCTTCAC 60.136 52.381 0.00 0.00 36.26 3.18
1530 1577 6.444633 ACAAGCTTCACAATTCAGATCAAAG 58.555 36.000 0.00 0.00 0.00 2.77
1707 1762 0.329261 CCCTGACCAAGGCATTCTCA 59.671 55.000 0.00 0.00 45.89 3.27
1709 1764 1.815003 CCTGACCAAGGCATTCTCAAC 59.185 52.381 0.00 0.00 39.93 3.18
1861 1916 3.965539 CTGAAGCCGAGGTGCCCAG 62.966 68.421 0.00 0.00 0.00 4.45
1953 2008 0.037232 ACTACAAGAACCTCCTGCGC 60.037 55.000 0.00 0.00 0.00 6.09
2196 2259 5.664457 TCTCAGTATGGTGATCATGTCAAC 58.336 41.667 0.00 6.43 45.15 3.18
2313 2389 1.400846 CTGCTTGAGTGTGGATGCATC 59.599 52.381 18.81 18.81 0.00 3.91
2373 2452 9.846248 ATCTGATTTTTAATTTTCTTCCAGACG 57.154 29.630 0.00 0.00 31.00 4.18
2391 2470 5.874810 CCAGACGAACCAGATCTTTCAATTA 59.125 40.000 7.70 0.00 0.00 1.40
2418 2497 3.670523 GCTGAAAGTTCGAAGAATTTGCC 59.329 43.478 0.00 0.00 45.90 4.52
2540 2620 1.128200 AGCACATAGGATACGGCCAA 58.872 50.000 2.24 0.00 46.39 4.52
2599 2679 3.521531 TGATTAGTACCACATTGCCTGGA 59.478 43.478 0.00 0.00 32.55 3.86
2602 2682 5.904984 TTAGTACCACATTGCCTGGATAT 57.095 39.130 0.00 0.00 32.55 1.63
2635 2715 2.026636 CGGTGGGGAAGGATACAAAAGA 60.027 50.000 0.00 0.00 41.41 2.52
2652 2732 4.386413 AAGGAGCAAGCCTTCACG 57.614 55.556 0.00 0.00 44.89 4.35
2653 2733 1.754745 AAGGAGCAAGCCTTCACGA 59.245 52.632 0.00 0.00 44.89 4.35
2663 2743 2.960819 AGCCTTCACGACAAGTCATAC 58.039 47.619 0.72 0.00 0.00 2.39
2665 2745 2.353803 GCCTTCACGACAAGTCATACCT 60.354 50.000 0.72 0.00 0.00 3.08
2671 2751 3.608506 CACGACAAGTCATACCTTTCTCG 59.391 47.826 0.72 0.00 32.27 4.04
2673 2753 3.367087 CGACAAGTCATACCTTTCTCGGT 60.367 47.826 0.72 0.00 41.10 4.69
2678 2758 5.485209 AGTCATACCTTTCTCGGTCTTTT 57.515 39.130 0.00 0.00 38.49 2.27
2680 2760 4.392138 GTCATACCTTTCTCGGTCTTTTGG 59.608 45.833 0.00 0.00 38.49 3.28
2683 2763 2.370849 ACCTTTCTCGGTCTTTTGGCTA 59.629 45.455 0.00 0.00 29.14 3.93
2684 2764 3.009143 ACCTTTCTCGGTCTTTTGGCTAT 59.991 43.478 0.00 0.00 29.14 2.97
2685 2765 3.375299 CCTTTCTCGGTCTTTTGGCTATG 59.625 47.826 0.00 0.00 0.00 2.23
2691 2771 4.584874 TCGGTCTTTTGGCTATGATCAAA 58.415 39.130 0.00 0.00 0.00 2.69
2699 2779 9.109393 TCTTTTGGCTATGATCAAATGTAGTAC 57.891 33.333 0.00 0.00 33.58 2.73
2702 2782 6.524734 TGGCTATGATCAAATGTAGTACCTG 58.475 40.000 0.00 0.00 0.00 4.00
2746 2827 0.604243 AGACAATTGCCCGTGCGTTA 60.604 50.000 5.05 0.00 41.78 3.18
2747 2828 0.453782 GACAATTGCCCGTGCGTTAC 60.454 55.000 5.05 0.00 41.78 2.50
2781 2862 9.570488 GTATAAACATTCTAGTAGATTAGCCCG 57.430 37.037 0.00 0.00 0.00 6.13
2782 2863 6.481434 AAACATTCTAGTAGATTAGCCCGT 57.519 37.500 0.00 0.00 0.00 5.28
2783 2864 5.455056 ACATTCTAGTAGATTAGCCCGTG 57.545 43.478 0.00 0.00 0.00 4.94
2784 2865 5.138276 ACATTCTAGTAGATTAGCCCGTGA 58.862 41.667 0.00 0.00 0.00 4.35
2785 2866 5.009811 ACATTCTAGTAGATTAGCCCGTGAC 59.990 44.000 0.00 0.00 0.00 3.67
2786 2867 3.136763 TCTAGTAGATTAGCCCGTGACG 58.863 50.000 0.00 0.00 0.00 4.35
2802 2883 3.599412 ACGGCGCGTCCATTATTAT 57.401 47.368 17.57 0.00 33.69 1.28
2803 2884 2.728690 ACGGCGCGTCCATTATTATA 57.271 45.000 17.57 0.00 33.69 0.98
2804 2885 3.241067 ACGGCGCGTCCATTATTATAT 57.759 42.857 17.57 0.00 33.69 0.86
2805 2886 3.592059 ACGGCGCGTCCATTATTATATT 58.408 40.909 17.57 0.00 33.69 1.28
2806 2887 3.369756 ACGGCGCGTCCATTATTATATTG 59.630 43.478 17.57 0.00 33.69 1.90
2807 2888 3.615056 CGGCGCGTCCATTATTATATTGA 59.385 43.478 17.57 0.00 34.01 2.57
2808 2889 4.491924 CGGCGCGTCCATTATTATATTGAC 60.492 45.833 17.57 0.00 34.01 3.18
2809 2890 4.491924 GGCGCGTCCATTATTATATTGACG 60.492 45.833 8.43 5.57 37.78 4.35
2812 2893 4.565229 CGTCCATTATTATATTGACGCGC 58.435 43.478 5.73 0.00 0.00 6.86
2813 2894 4.326278 CGTCCATTATTATATTGACGCGCT 59.674 41.667 5.73 0.00 0.00 5.92
2814 2895 5.513849 CGTCCATTATTATATTGACGCGCTA 59.486 40.000 5.73 0.00 0.00 4.26
2815 2896 6.034150 CGTCCATTATTATATTGACGCGCTAA 59.966 38.462 5.73 1.05 0.00 3.09
2816 2897 7.411049 CGTCCATTATTATATTGACGCGCTAAA 60.411 37.037 5.73 0.00 0.00 1.85
2817 2898 8.225107 GTCCATTATTATATTGACGCGCTAAAA 58.775 33.333 5.73 0.00 0.00 1.52
2818 2899 8.941977 TCCATTATTATATTGACGCGCTAAAAT 58.058 29.630 5.73 3.58 0.00 1.82
2843 2924 7.919313 ATTAGCAAATTCTTGTATGCAATCG 57.081 32.000 0.00 0.00 41.18 3.34
2844 2925 4.107622 AGCAAATTCTTGTATGCAATCGC 58.892 39.130 0.00 0.00 41.18 4.58
2845 2926 3.243643 GCAAATTCTTGTATGCAATCGCC 59.756 43.478 0.00 0.00 38.63 5.54
2846 2927 4.422840 CAAATTCTTGTATGCAATCGCCA 58.577 39.130 0.00 0.00 37.32 5.69
2847 2928 4.924305 AATTCTTGTATGCAATCGCCAT 57.076 36.364 0.00 0.00 37.32 4.40
2848 2929 3.696281 TTCTTGTATGCAATCGCCATG 57.304 42.857 0.00 0.00 37.32 3.66
2849 2930 2.916640 TCTTGTATGCAATCGCCATGA 58.083 42.857 0.00 0.00 37.32 3.07
2850 2931 3.479489 TCTTGTATGCAATCGCCATGAT 58.521 40.909 0.00 0.00 39.67 2.45
2852 2933 4.338964 TCTTGTATGCAATCGCCATGATTT 59.661 37.500 0.00 0.00 45.06 2.17
2853 2934 5.530543 TCTTGTATGCAATCGCCATGATTTA 59.469 36.000 0.00 0.00 45.06 1.40
2854 2935 5.963176 TGTATGCAATCGCCATGATTTAT 57.037 34.783 0.00 0.00 45.06 1.40
2855 2936 6.330004 TGTATGCAATCGCCATGATTTATT 57.670 33.333 0.00 0.00 45.06 1.40
2856 2937 6.747125 TGTATGCAATCGCCATGATTTATTT 58.253 32.000 0.00 0.00 45.06 1.40
2857 2938 6.641723 TGTATGCAATCGCCATGATTTATTTG 59.358 34.615 0.00 0.00 45.06 2.32
2858 2939 5.008619 TGCAATCGCCATGATTTATTTGT 57.991 34.783 0.00 0.00 45.06 2.83
2859 2940 5.042593 TGCAATCGCCATGATTTATTTGTC 58.957 37.500 0.00 0.00 45.06 3.18
2860 2941 5.042593 GCAATCGCCATGATTTATTTGTCA 58.957 37.500 0.00 0.00 45.06 3.58
2861 2942 5.693104 GCAATCGCCATGATTTATTTGTCAT 59.307 36.000 0.00 0.00 45.06 3.06
2862 2943 6.201425 GCAATCGCCATGATTTATTTGTCATT 59.799 34.615 0.00 0.00 45.06 2.57
2863 2944 7.254522 GCAATCGCCATGATTTATTTGTCATTT 60.255 33.333 0.00 0.00 45.06 2.32
2864 2945 8.605746 CAATCGCCATGATTTATTTGTCATTTT 58.394 29.630 0.00 0.00 45.06 1.82
2865 2946 9.814899 AATCGCCATGATTTATTTGTCATTTTA 57.185 25.926 0.00 0.00 45.06 1.52
2866 2947 9.985730 ATCGCCATGATTTATTTGTCATTTTAT 57.014 25.926 0.00 0.00 32.98 1.40
2867 2948 9.814899 TCGCCATGATTTATTTGTCATTTTATT 57.185 25.926 0.00 0.00 32.98 1.40
2868 2949 9.852481 CGCCATGATTTATTTGTCATTTTATTG 57.148 29.630 0.00 0.00 32.98 1.90
2970 3051 9.627123 TGATACAATTGGTTCTATTTTAGGGAG 57.373 33.333 10.83 0.00 0.00 4.30
2971 3052 8.996651 ATACAATTGGTTCTATTTTAGGGAGG 57.003 34.615 10.83 0.00 0.00 4.30
2972 3053 7.039722 ACAATTGGTTCTATTTTAGGGAGGA 57.960 36.000 10.83 0.00 0.00 3.71
2973 3054 7.652554 ACAATTGGTTCTATTTTAGGGAGGAT 58.347 34.615 10.83 0.00 0.00 3.24
2974 3055 7.561356 ACAATTGGTTCTATTTTAGGGAGGATG 59.439 37.037 10.83 0.00 0.00 3.51
2975 3056 5.646692 TGGTTCTATTTTAGGGAGGATGG 57.353 43.478 0.00 0.00 0.00 3.51
2976 3057 5.293643 TGGTTCTATTTTAGGGAGGATGGA 58.706 41.667 0.00 0.00 0.00 3.41
2977 3058 5.917087 TGGTTCTATTTTAGGGAGGATGGAT 59.083 40.000 0.00 0.00 0.00 3.41
2978 3059 6.183361 TGGTTCTATTTTAGGGAGGATGGATG 60.183 42.308 0.00 0.00 0.00 3.51
2979 3060 6.241645 GTTCTATTTTAGGGAGGATGGATGG 58.758 44.000 0.00 0.00 0.00 3.51
2980 3061 4.852118 TCTATTTTAGGGAGGATGGATGGG 59.148 45.833 0.00 0.00 0.00 4.00
2981 3062 2.908263 TTTAGGGAGGATGGATGGGA 57.092 50.000 0.00 0.00 0.00 4.37
2982 3063 2.422939 TTAGGGAGGATGGATGGGAG 57.577 55.000 0.00 0.00 0.00 4.30
2983 3064 1.557681 TAGGGAGGATGGATGGGAGA 58.442 55.000 0.00 0.00 0.00 3.71
2984 3065 0.649992 AGGGAGGATGGATGGGAGAA 59.350 55.000 0.00 0.00 0.00 2.87
2985 3066 1.011293 AGGGAGGATGGATGGGAGAAA 59.989 52.381 0.00 0.00 0.00 2.52
2986 3067 1.852965 GGGAGGATGGATGGGAGAAAA 59.147 52.381 0.00 0.00 0.00 2.29
2987 3068 2.244769 GGGAGGATGGATGGGAGAAAAA 59.755 50.000 0.00 0.00 0.00 1.94
2988 3069 3.116977 GGGAGGATGGATGGGAGAAAAAT 60.117 47.826 0.00 0.00 0.00 1.82
2989 3070 4.148079 GGAGGATGGATGGGAGAAAAATC 58.852 47.826 0.00 0.00 0.00 2.17
2990 3071 4.386761 GGAGGATGGATGGGAGAAAAATCA 60.387 45.833 0.00 0.00 0.00 2.57
2991 3072 4.801164 AGGATGGATGGGAGAAAAATCAG 58.199 43.478 0.00 0.00 0.00 2.90
2992 3073 4.479796 AGGATGGATGGGAGAAAAATCAGA 59.520 41.667 0.00 0.00 0.00 3.27
2993 3074 4.826183 GGATGGATGGGAGAAAAATCAGAG 59.174 45.833 0.00 0.00 0.00 3.35
2994 3075 5.398353 GGATGGATGGGAGAAAAATCAGAGA 60.398 44.000 0.00 0.00 0.00 3.10
2995 3076 5.722172 TGGATGGGAGAAAAATCAGAGAT 57.278 39.130 0.00 0.00 0.00 2.75
2996 3077 5.443283 TGGATGGGAGAAAAATCAGAGATG 58.557 41.667 0.00 0.00 0.00 2.90
2997 3078 5.192321 TGGATGGGAGAAAAATCAGAGATGA 59.808 40.000 0.00 0.00 0.00 2.92
2998 3079 5.764192 GGATGGGAGAAAAATCAGAGATGAG 59.236 44.000 0.00 0.00 0.00 2.90
2999 3080 6.409005 GGATGGGAGAAAAATCAGAGATGAGA 60.409 42.308 0.00 0.00 0.00 3.27
3000 3081 5.987098 TGGGAGAAAAATCAGAGATGAGAG 58.013 41.667 0.00 0.00 0.00 3.20
3001 3082 5.723405 TGGGAGAAAAATCAGAGATGAGAGA 59.277 40.000 0.00 0.00 0.00 3.10
3002 3083 6.214208 TGGGAGAAAAATCAGAGATGAGAGAA 59.786 38.462 0.00 0.00 0.00 2.87
3003 3084 7.108847 GGGAGAAAAATCAGAGATGAGAGAAA 58.891 38.462 0.00 0.00 0.00 2.52
3004 3085 7.609532 GGGAGAAAAATCAGAGATGAGAGAAAA 59.390 37.037 0.00 0.00 0.00 2.29
3005 3086 9.007901 GGAGAAAAATCAGAGATGAGAGAAAAA 57.992 33.333 0.00 0.00 0.00 1.94
3030 3111 7.637631 AATTAAAAGAGGAGATGGAAAGAGC 57.362 36.000 0.00 0.00 0.00 4.09
3031 3112 2.977772 AAGAGGAGATGGAAAGAGCG 57.022 50.000 0.00 0.00 0.00 5.03
3032 3113 1.118838 AGAGGAGATGGAAAGAGCGG 58.881 55.000 0.00 0.00 0.00 5.52
3033 3114 1.115467 GAGGAGATGGAAAGAGCGGA 58.885 55.000 0.00 0.00 0.00 5.54
3034 3115 1.482593 GAGGAGATGGAAAGAGCGGAA 59.517 52.381 0.00 0.00 0.00 4.30
3035 3116 1.208293 AGGAGATGGAAAGAGCGGAAC 59.792 52.381 0.00 0.00 0.00 3.62
3036 3117 1.066143 GGAGATGGAAAGAGCGGAACA 60.066 52.381 0.00 0.00 0.00 3.18
3037 3118 2.420687 GGAGATGGAAAGAGCGGAACAT 60.421 50.000 0.00 0.00 0.00 2.71
3038 3119 3.181465 GGAGATGGAAAGAGCGGAACATA 60.181 47.826 0.00 0.00 0.00 2.29
3039 3120 4.503991 GGAGATGGAAAGAGCGGAACATAT 60.504 45.833 0.00 0.00 0.00 1.78
3040 3121 5.279506 GGAGATGGAAAGAGCGGAACATATA 60.280 44.000 0.00 0.00 0.00 0.86
3041 3122 5.542779 AGATGGAAAGAGCGGAACATATAC 58.457 41.667 0.00 0.00 0.00 1.47
3042 3123 4.746535 TGGAAAGAGCGGAACATATACA 57.253 40.909 0.00 0.00 0.00 2.29
3043 3124 5.092554 TGGAAAGAGCGGAACATATACAA 57.907 39.130 0.00 0.00 0.00 2.41
3044 3125 5.116180 TGGAAAGAGCGGAACATATACAAG 58.884 41.667 0.00 0.00 0.00 3.16
3045 3126 4.511826 GGAAAGAGCGGAACATATACAAGG 59.488 45.833 0.00 0.00 0.00 3.61
3046 3127 5.353394 AAAGAGCGGAACATATACAAGGA 57.647 39.130 0.00 0.00 0.00 3.36
3047 3128 5.353394 AAGAGCGGAACATATACAAGGAA 57.647 39.130 0.00 0.00 0.00 3.36
3048 3129 4.950050 AGAGCGGAACATATACAAGGAAG 58.050 43.478 0.00 0.00 0.00 3.46
3049 3130 4.058817 GAGCGGAACATATACAAGGAAGG 58.941 47.826 0.00 0.00 0.00 3.46
3050 3131 3.454812 AGCGGAACATATACAAGGAAGGT 59.545 43.478 0.00 0.00 0.00 3.50
3051 3132 4.080526 AGCGGAACATATACAAGGAAGGTT 60.081 41.667 0.00 0.00 0.00 3.50
3052 3133 4.035208 GCGGAACATATACAAGGAAGGTTG 59.965 45.833 0.00 0.00 0.00 3.77
3053 3134 4.574828 CGGAACATATACAAGGAAGGTTGG 59.425 45.833 0.00 0.00 0.00 3.77
3054 3135 5.628200 CGGAACATATACAAGGAAGGTTGGA 60.628 44.000 0.00 0.00 0.00 3.53
3055 3136 5.589050 GGAACATATACAAGGAAGGTTGGAC 59.411 44.000 0.00 0.00 0.00 4.02
3056 3137 4.766375 ACATATACAAGGAAGGTTGGACG 58.234 43.478 0.00 0.00 0.00 4.79
3057 3138 4.468510 ACATATACAAGGAAGGTTGGACGA 59.531 41.667 0.00 0.00 0.00 4.20
3058 3139 5.046159 ACATATACAAGGAAGGTTGGACGAA 60.046 40.000 0.00 0.00 0.00 3.85
3059 3140 2.721425 ACAAGGAAGGTTGGACGAAA 57.279 45.000 0.00 0.00 0.00 3.46
3060 3141 3.007473 ACAAGGAAGGTTGGACGAAAA 57.993 42.857 0.00 0.00 0.00 2.29
3061 3142 3.358118 ACAAGGAAGGTTGGACGAAAAA 58.642 40.909 0.00 0.00 0.00 1.94
3062 3143 3.380320 ACAAGGAAGGTTGGACGAAAAAG 59.620 43.478 0.00 0.00 0.00 2.27
3063 3144 3.570912 AGGAAGGTTGGACGAAAAAGA 57.429 42.857 0.00 0.00 0.00 2.52
3064 3145 3.477530 AGGAAGGTTGGACGAAAAAGAG 58.522 45.455 0.00 0.00 0.00 2.85
3065 3146 2.552743 GGAAGGTTGGACGAAAAAGAGG 59.447 50.000 0.00 0.00 0.00 3.69
3066 3147 3.211865 GAAGGTTGGACGAAAAAGAGGT 58.788 45.455 0.00 0.00 0.00 3.85
3067 3148 2.572290 AGGTTGGACGAAAAAGAGGTG 58.428 47.619 0.00 0.00 0.00 4.00
3068 3149 2.171870 AGGTTGGACGAAAAAGAGGTGA 59.828 45.455 0.00 0.00 0.00 4.02
3069 3150 2.946990 GGTTGGACGAAAAAGAGGTGAA 59.053 45.455 0.00 0.00 0.00 3.18
3070 3151 3.003378 GGTTGGACGAAAAAGAGGTGAAG 59.997 47.826 0.00 0.00 0.00 3.02
3071 3152 3.553828 TGGACGAAAAAGAGGTGAAGT 57.446 42.857 0.00 0.00 0.00 3.01
3072 3153 3.202906 TGGACGAAAAAGAGGTGAAGTG 58.797 45.455 0.00 0.00 0.00 3.16
3073 3154 2.548480 GGACGAAAAAGAGGTGAAGTGG 59.452 50.000 0.00 0.00 0.00 4.00
3074 3155 2.548480 GACGAAAAAGAGGTGAAGTGGG 59.452 50.000 0.00 0.00 0.00 4.61
3075 3156 2.171870 ACGAAAAAGAGGTGAAGTGGGA 59.828 45.455 0.00 0.00 0.00 4.37
3076 3157 3.211045 CGAAAAAGAGGTGAAGTGGGAA 58.789 45.455 0.00 0.00 0.00 3.97
3077 3158 3.630312 CGAAAAAGAGGTGAAGTGGGAAA 59.370 43.478 0.00 0.00 0.00 3.13
3078 3159 4.497507 CGAAAAAGAGGTGAAGTGGGAAAC 60.498 45.833 0.00 0.00 0.00 2.78
3079 3160 3.953542 AAAGAGGTGAAGTGGGAAACT 57.046 42.857 0.00 0.00 42.60 2.66
3095 3176 9.197306 AGTGGGAAACTTATGTTCTTTTTAAGT 57.803 29.630 0.00 0.00 34.57 2.24
3116 3197 7.889873 AAGTAGTAGTAGAGATTGATGTGCT 57.110 36.000 0.00 0.00 0.00 4.40
3117 3198 8.982091 AAGTAGTAGTAGAGATTGATGTGCTA 57.018 34.615 0.00 0.00 0.00 3.49
3118 3199 8.982091 AGTAGTAGTAGAGATTGATGTGCTAA 57.018 34.615 0.00 0.00 0.00 3.09
3119 3200 9.409918 AGTAGTAGTAGAGATTGATGTGCTAAA 57.590 33.333 0.00 0.00 0.00 1.85
3122 3203 9.757227 AGTAGTAGAGATTGATGTGCTAAAATC 57.243 33.333 0.00 0.00 0.00 2.17
3123 3204 9.757227 GTAGTAGAGATTGATGTGCTAAAATCT 57.243 33.333 0.00 0.00 41.03 2.40
3143 3224 9.762933 AAAATCTTAGCAAGTTTTCTTTATGCA 57.237 25.926 0.00 0.00 38.17 3.96
3144 3225 9.762933 AAATCTTAGCAAGTTTTCTTTATGCAA 57.237 25.926 0.00 0.00 38.17 4.08
3145 3226 9.933723 AATCTTAGCAAGTTTTCTTTATGCAAT 57.066 25.926 0.00 0.00 38.17 3.56
3146 3227 8.970691 TCTTAGCAAGTTTTCTTTATGCAATC 57.029 30.769 0.00 0.00 38.17 2.67
3147 3228 7.750458 TCTTAGCAAGTTTTCTTTATGCAATCG 59.250 33.333 0.00 0.00 38.17 3.34
3148 3229 4.622740 AGCAAGTTTTCTTTATGCAATCGC 59.377 37.500 0.00 0.00 38.17 4.58
3149 3230 4.201618 GCAAGTTTTCTTTATGCAATCGCC 60.202 41.667 0.00 0.00 38.17 5.54
3150 3231 4.782019 AGTTTTCTTTATGCAATCGCCA 57.218 36.364 0.00 0.00 37.32 5.69
3151 3232 5.329035 AGTTTTCTTTATGCAATCGCCAT 57.671 34.783 0.00 0.00 37.32 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.353383 AGGCTCGAAACCTTAAACTCTT 57.647 40.909 0.74 0.00 31.87 2.85
3 4 3.813724 ACAAGGCTCGAAACCTTAAACTC 59.186 43.478 16.77 0.00 45.90 3.01
4 5 3.813724 GACAAGGCTCGAAACCTTAAACT 59.186 43.478 16.77 3.21 45.90 2.66
5 6 3.058432 GGACAAGGCTCGAAACCTTAAAC 60.058 47.826 16.77 11.56 45.90 2.01
6 7 3.143728 GGACAAGGCTCGAAACCTTAAA 58.856 45.455 16.77 0.00 45.90 1.52
7 8 2.105134 TGGACAAGGCTCGAAACCTTAA 59.895 45.455 16.77 3.78 45.90 1.85
8 9 1.695242 TGGACAAGGCTCGAAACCTTA 59.305 47.619 16.77 1.92 45.90 2.69
10 11 0.035458 CTGGACAAGGCTCGAAACCT 59.965 55.000 0.74 0.74 40.02 3.50
11 12 0.955919 CCTGGACAAGGCTCGAAACC 60.956 60.000 0.00 0.00 39.93 3.27
12 13 2.544726 CCTGGACAAGGCTCGAAAC 58.455 57.895 0.00 0.00 39.93 2.78
21 22 2.566833 TGGAACATGACCTGGACAAG 57.433 50.000 0.00 0.00 0.00 3.16
35 36 6.758886 AGATGACACGATTCTCTTTATGGAAC 59.241 38.462 0.00 0.00 0.00 3.62
36 37 6.758416 CAGATGACACGATTCTCTTTATGGAA 59.242 38.462 0.00 0.00 0.00 3.53
37 38 6.276091 CAGATGACACGATTCTCTTTATGGA 58.724 40.000 0.00 0.00 0.00 3.41
38 39 5.050499 GCAGATGACACGATTCTCTTTATGG 60.050 44.000 0.00 0.00 0.00 2.74
39 40 5.521372 TGCAGATGACACGATTCTCTTTATG 59.479 40.000 0.00 0.00 0.00 1.90
40 41 5.664457 TGCAGATGACACGATTCTCTTTAT 58.336 37.500 0.00 0.00 0.00 1.40
41 42 5.072040 TGCAGATGACACGATTCTCTTTA 57.928 39.130 0.00 0.00 0.00 1.85
42 43 3.930336 TGCAGATGACACGATTCTCTTT 58.070 40.909 0.00 0.00 0.00 2.52
43 44 3.599730 TGCAGATGACACGATTCTCTT 57.400 42.857 0.00 0.00 0.00 2.85
44 45 3.815856 ATGCAGATGACACGATTCTCT 57.184 42.857 0.00 0.00 0.00 3.10
45 46 5.614231 GCAATATGCAGATGACACGATTCTC 60.614 44.000 0.00 0.00 44.26 2.87
46 47 4.212847 GCAATATGCAGATGACACGATTCT 59.787 41.667 0.00 0.00 44.26 2.40
47 48 4.461405 GCAATATGCAGATGACACGATTC 58.539 43.478 0.00 0.00 44.26 2.52
48 49 4.478843 GCAATATGCAGATGACACGATT 57.521 40.909 0.00 0.00 44.26 3.34
61 62 5.683859 CGGTCTTTCTATTCTGCAATATGC 58.316 41.667 0.00 0.00 45.29 3.14
62 63 5.334414 GGCGGTCTTTCTATTCTGCAATATG 60.334 44.000 0.00 0.00 34.34 1.78
63 64 4.757149 GGCGGTCTTTCTATTCTGCAATAT 59.243 41.667 0.00 0.00 34.34 1.28
64 65 4.127171 GGCGGTCTTTCTATTCTGCAATA 58.873 43.478 0.00 0.00 34.34 1.90
65 66 2.945668 GGCGGTCTTTCTATTCTGCAAT 59.054 45.455 0.00 0.00 34.34 3.56
66 67 2.290008 TGGCGGTCTTTCTATTCTGCAA 60.290 45.455 0.00 0.00 34.34 4.08
67 68 1.277842 TGGCGGTCTTTCTATTCTGCA 59.722 47.619 0.00 0.00 34.34 4.41
68 69 2.024176 TGGCGGTCTTTCTATTCTGC 57.976 50.000 0.00 0.00 0.00 4.26
69 70 3.134458 GGATGGCGGTCTTTCTATTCTG 58.866 50.000 0.00 0.00 0.00 3.02
70 71 2.771943 TGGATGGCGGTCTTTCTATTCT 59.228 45.455 0.00 0.00 0.00 2.40
71 72 2.872858 GTGGATGGCGGTCTTTCTATTC 59.127 50.000 0.00 0.00 0.00 1.75
72 73 2.238646 TGTGGATGGCGGTCTTTCTATT 59.761 45.455 0.00 0.00 0.00 1.73
73 74 1.837439 TGTGGATGGCGGTCTTTCTAT 59.163 47.619 0.00 0.00 0.00 1.98
74 75 1.271856 TGTGGATGGCGGTCTTTCTA 58.728 50.000 0.00 0.00 0.00 2.10
75 76 0.400213 TTGTGGATGGCGGTCTTTCT 59.600 50.000 0.00 0.00 0.00 2.52
76 77 0.804989 CTTGTGGATGGCGGTCTTTC 59.195 55.000 0.00 0.00 0.00 2.62
77 78 0.609131 CCTTGTGGATGGCGGTCTTT 60.609 55.000 0.00 0.00 34.57 2.52
78 79 1.002134 CCTTGTGGATGGCGGTCTT 60.002 57.895 0.00 0.00 34.57 3.01
79 80 2.224159 ACCTTGTGGATGGCGGTCT 61.224 57.895 0.00 0.00 37.04 3.85
80 81 2.040544 CACCTTGTGGATGGCGGTC 61.041 63.158 0.00 0.00 37.04 4.79
81 82 2.034066 CACCTTGTGGATGGCGGT 59.966 61.111 0.00 0.00 37.04 5.68
82 83 2.034066 ACACCTTGTGGATGGCGG 59.966 61.111 0.00 0.00 37.94 6.13
83 84 3.266964 CACACCTTGTGGATGGCG 58.733 61.111 0.00 0.00 44.27 5.69
91 92 0.396811 GGAGTAGTGCCACACCTTGT 59.603 55.000 0.00 0.00 34.49 3.16
92 93 0.687354 AGGAGTAGTGCCACACCTTG 59.313 55.000 0.00 0.00 36.23 3.61
93 94 0.687354 CAGGAGTAGTGCCACACCTT 59.313 55.000 0.00 0.00 37.40 3.50
94 95 1.831652 GCAGGAGTAGTGCCACACCT 61.832 60.000 0.00 0.00 39.75 4.00
95 96 1.376037 GCAGGAGTAGTGCCACACC 60.376 63.158 0.00 0.00 34.49 4.16
96 97 0.250295 TTGCAGGAGTAGTGCCACAC 60.250 55.000 0.00 0.00 40.43 3.82
97 98 0.692476 ATTGCAGGAGTAGTGCCACA 59.308 50.000 0.00 0.00 40.43 4.17
98 99 1.373570 GATTGCAGGAGTAGTGCCAC 58.626 55.000 0.00 0.00 40.43 5.01
99 100 0.253044 GGATTGCAGGAGTAGTGCCA 59.747 55.000 0.00 0.00 40.43 4.92
100 101 0.811616 CGGATTGCAGGAGTAGTGCC 60.812 60.000 0.00 0.00 40.43 5.01
101 102 0.811616 CCGGATTGCAGGAGTAGTGC 60.812 60.000 0.00 0.00 41.59 4.40
102 103 0.811616 GCCGGATTGCAGGAGTAGTG 60.812 60.000 5.05 0.00 0.00 2.74
103 104 1.522569 GCCGGATTGCAGGAGTAGT 59.477 57.895 5.05 0.00 0.00 2.73
104 105 1.227674 GGCCGGATTGCAGGAGTAG 60.228 63.158 5.05 0.00 0.00 2.57
105 106 2.908015 GGCCGGATTGCAGGAGTA 59.092 61.111 5.05 0.00 0.00 2.59
106 107 4.473520 CGGCCGGATTGCAGGAGT 62.474 66.667 20.10 0.00 0.00 3.85
107 108 4.473520 ACGGCCGGATTGCAGGAG 62.474 66.667 31.76 0.00 0.00 3.69
108 109 4.467084 GACGGCCGGATTGCAGGA 62.467 66.667 31.76 0.00 0.00 3.86
110 111 4.473520 AGGACGGCCGGATTGCAG 62.474 66.667 31.76 0.00 39.96 4.41
111 112 4.776322 CAGGACGGCCGGATTGCA 62.776 66.667 31.76 0.00 39.96 4.08
113 114 3.976701 AAGCAGGACGGCCGGATTG 62.977 63.158 31.76 23.37 36.62 2.67
114 115 3.717294 AAGCAGGACGGCCGGATT 61.717 61.111 31.76 8.95 39.96 3.01
115 116 4.473520 CAAGCAGGACGGCCGGAT 62.474 66.667 31.76 9.62 39.96 4.18
128 129 3.729906 CTGATTGAGCGCGCCAAGC 62.730 63.158 30.36 30.36 43.95 4.01
129 130 1.638388 TTCTGATTGAGCGCGCCAAG 61.638 55.000 30.33 18.42 0.00 3.61
130 131 1.026182 ATTCTGATTGAGCGCGCCAA 61.026 50.000 30.33 29.17 0.00 4.52
131 132 0.179086 TATTCTGATTGAGCGCGCCA 60.179 50.000 30.33 22.55 0.00 5.69
132 133 0.510359 CTATTCTGATTGAGCGCGCC 59.490 55.000 30.33 19.97 0.00 6.53
133 134 0.110912 GCTATTCTGATTGAGCGCGC 60.111 55.000 26.66 26.66 0.00 6.86
134 135 0.510359 GGCTATTCTGATTGAGCGCG 59.490 55.000 0.00 0.00 35.71 6.86
135 136 1.586422 TGGCTATTCTGATTGAGCGC 58.414 50.000 0.00 0.00 35.71 5.92
136 137 2.938451 TGTTGGCTATTCTGATTGAGCG 59.062 45.455 0.00 0.00 35.71 5.03
137 138 4.337555 ACATGTTGGCTATTCTGATTGAGC 59.662 41.667 0.00 0.00 0.00 4.26
138 139 5.587443 TGACATGTTGGCTATTCTGATTGAG 59.413 40.000 0.00 0.00 0.00 3.02
139 140 5.499313 TGACATGTTGGCTATTCTGATTGA 58.501 37.500 0.00 0.00 0.00 2.57
140 141 5.732528 GCTGACATGTTGGCTATTCTGATTG 60.733 44.000 14.14 0.00 0.00 2.67
141 142 4.337555 GCTGACATGTTGGCTATTCTGATT 59.662 41.667 14.14 0.00 0.00 2.57
142 143 3.881688 GCTGACATGTTGGCTATTCTGAT 59.118 43.478 14.14 0.00 0.00 2.90
143 144 3.273434 GCTGACATGTTGGCTATTCTGA 58.727 45.455 14.14 0.00 0.00 3.27
144 145 2.031314 CGCTGACATGTTGGCTATTCTG 59.969 50.000 17.54 2.15 0.00 3.02
145 146 2.093500 TCGCTGACATGTTGGCTATTCT 60.093 45.455 17.54 0.00 0.00 2.40
146 147 2.030946 GTCGCTGACATGTTGGCTATTC 59.969 50.000 17.54 0.00 32.09 1.75
147 148 2.009774 GTCGCTGACATGTTGGCTATT 58.990 47.619 17.54 0.00 32.09 1.73
148 149 1.066215 TGTCGCTGACATGTTGGCTAT 60.066 47.619 17.54 0.00 37.67 2.97
149 150 0.320050 TGTCGCTGACATGTTGGCTA 59.680 50.000 17.54 7.85 37.67 3.93
150 151 0.534877 TTGTCGCTGACATGTTGGCT 60.535 50.000 17.54 0.00 42.40 4.75
151 152 0.523072 ATTGTCGCTGACATGTTGGC 59.477 50.000 0.00 6.86 42.40 4.52
152 153 1.536766 ACATTGTCGCTGACATGTTGG 59.463 47.619 0.00 0.00 42.40 3.77
153 154 2.975410 ACATTGTCGCTGACATGTTG 57.025 45.000 0.00 11.36 42.40 3.33
154 155 5.431420 TTTAACATTGTCGCTGACATGTT 57.569 34.783 23.92 23.92 42.40 2.71
155 156 5.627499 ATTTAACATTGTCGCTGACATGT 57.373 34.783 0.00 0.00 42.40 3.21
156 157 7.020602 TGTTATTTAACATTGTCGCTGACATG 58.979 34.615 11.23 12.68 40.39 3.21
157 158 7.139896 TGTTATTTAACATTGTCGCTGACAT 57.860 32.000 11.23 1.35 40.39 3.06
158 159 6.546972 TGTTATTTAACATTGTCGCTGACA 57.453 33.333 7.20 7.20 40.93 3.58
171 172 8.281212 ACTCCATGTCTCCAATGTTATTTAAC 57.719 34.615 0.00 0.00 36.74 2.01
172 173 8.106462 TGACTCCATGTCTCCAATGTTATTTAA 58.894 33.333 0.00 0.00 45.54 1.52
173 174 7.552687 GTGACTCCATGTCTCCAATGTTATTTA 59.447 37.037 0.00 0.00 45.54 1.40
174 175 6.375455 GTGACTCCATGTCTCCAATGTTATTT 59.625 38.462 0.00 0.00 45.54 1.40
175 176 5.882557 GTGACTCCATGTCTCCAATGTTATT 59.117 40.000 0.00 0.00 45.54 1.40
176 177 5.431765 GTGACTCCATGTCTCCAATGTTAT 58.568 41.667 0.00 0.00 45.54 1.89
177 178 4.832248 GTGACTCCATGTCTCCAATGTTA 58.168 43.478 0.00 0.00 45.54 2.41
178 179 3.679389 GTGACTCCATGTCTCCAATGTT 58.321 45.455 0.00 0.00 45.54 2.71
179 180 3.340814 GTGACTCCATGTCTCCAATGT 57.659 47.619 0.00 0.00 45.54 2.71
190 191 1.933021 TTACGACAGGGTGACTCCAT 58.067 50.000 0.00 0.00 38.11 3.41
191 192 1.822990 GATTACGACAGGGTGACTCCA 59.177 52.381 0.00 0.00 38.11 3.86
192 193 1.136500 GGATTACGACAGGGTGACTCC 59.864 57.143 0.00 0.00 0.00 3.85
193 194 2.100989 AGGATTACGACAGGGTGACTC 58.899 52.381 0.00 0.00 0.00 3.36
194 195 2.233305 AGGATTACGACAGGGTGACT 57.767 50.000 0.00 0.00 0.00 3.41
195 196 3.329929 AAAGGATTACGACAGGGTGAC 57.670 47.619 0.00 0.00 0.00 3.67
196 197 4.360951 AAAAAGGATTACGACAGGGTGA 57.639 40.909 0.00 0.00 0.00 4.02
215 216 7.113658 TGTAGGCCATTACTTTCAACAAAAA 57.886 32.000 5.01 0.00 0.00 1.94
216 217 6.716934 TGTAGGCCATTACTTTCAACAAAA 57.283 33.333 5.01 0.00 0.00 2.44
217 218 6.491745 TGATGTAGGCCATTACTTTCAACAAA 59.508 34.615 5.01 0.00 32.56 2.83
218 219 6.007076 TGATGTAGGCCATTACTTTCAACAA 58.993 36.000 5.01 0.00 32.56 2.83
219 220 5.565509 TGATGTAGGCCATTACTTTCAACA 58.434 37.500 5.01 0.00 32.56 3.33
220 221 6.318648 TGATGATGTAGGCCATTACTTTCAAC 59.681 38.462 5.01 7.14 32.56 3.18
221 222 6.422333 TGATGATGTAGGCCATTACTTTCAA 58.578 36.000 5.01 0.00 32.56 2.69
222 223 6.000246 TGATGATGTAGGCCATTACTTTCA 58.000 37.500 5.01 8.00 32.56 2.69
223 224 7.229306 TCAATGATGATGTAGGCCATTACTTTC 59.771 37.037 5.01 2.45 32.56 2.62
224 225 7.062322 TCAATGATGATGTAGGCCATTACTTT 58.938 34.615 5.01 0.00 32.56 2.66
225 226 6.604171 TCAATGATGATGTAGGCCATTACTT 58.396 36.000 5.01 0.00 32.56 2.24
226 227 6.191657 TCAATGATGATGTAGGCCATTACT 57.808 37.500 5.01 0.00 32.56 2.24
227 228 7.458409 AATCAATGATGATGTAGGCCATTAC 57.542 36.000 5.01 0.00 45.60 1.89
228 229 8.361889 CAAAATCAATGATGATGTAGGCCATTA 58.638 33.333 5.01 0.00 45.60 1.90
229 230 6.989155 AAATCAATGATGATGTAGGCCATT 57.011 33.333 5.01 0.00 45.60 3.16
230 231 6.551975 TCAAAATCAATGATGATGTAGGCCAT 59.448 34.615 5.01 0.00 45.60 4.40
231 232 5.892686 TCAAAATCAATGATGATGTAGGCCA 59.107 36.000 5.01 0.00 45.60 5.36
232 233 6.395426 TCAAAATCAATGATGATGTAGGCC 57.605 37.500 0.00 0.00 45.60 5.19
242 243 4.468510 AGTGTGGCCATCAAAATCAATGAT 59.531 37.500 9.72 0.00 38.02 2.45
243 244 3.833650 AGTGTGGCCATCAAAATCAATGA 59.166 39.130 9.72 0.00 0.00 2.57
244 245 4.196626 AGTGTGGCCATCAAAATCAATG 57.803 40.909 9.72 0.00 0.00 2.82
245 246 4.771577 TGTAGTGTGGCCATCAAAATCAAT 59.228 37.500 9.72 1.39 0.00 2.57
246 247 4.022416 GTGTAGTGTGGCCATCAAAATCAA 60.022 41.667 9.72 0.00 0.00 2.57
247 248 3.505680 GTGTAGTGTGGCCATCAAAATCA 59.494 43.478 9.72 0.00 0.00 2.57
248 249 3.119495 GGTGTAGTGTGGCCATCAAAATC 60.119 47.826 9.72 0.00 0.00 2.17
249 250 2.825532 GGTGTAGTGTGGCCATCAAAAT 59.174 45.455 9.72 0.00 0.00 1.82
250 251 2.235016 GGTGTAGTGTGGCCATCAAAA 58.765 47.619 9.72 0.00 0.00 2.44
251 252 1.143889 TGGTGTAGTGTGGCCATCAAA 59.856 47.619 9.72 0.00 0.00 2.69
252 253 0.767998 TGGTGTAGTGTGGCCATCAA 59.232 50.000 9.72 0.00 0.00 2.57
253 254 0.767998 TTGGTGTAGTGTGGCCATCA 59.232 50.000 9.72 6.28 0.00 3.07
254 255 1.453155 CTTGGTGTAGTGTGGCCATC 58.547 55.000 9.72 5.64 0.00 3.51
255 256 0.038166 CCTTGGTGTAGTGTGGCCAT 59.962 55.000 9.72 0.00 0.00 4.40
256 257 1.057275 TCCTTGGTGTAGTGTGGCCA 61.057 55.000 0.00 0.00 0.00 5.36
257 258 0.109723 TTCCTTGGTGTAGTGTGGCC 59.890 55.000 0.00 0.00 0.00 5.36
258 259 1.975660 TTTCCTTGGTGTAGTGTGGC 58.024 50.000 0.00 0.00 0.00 5.01
259 260 4.019681 TCCTATTTCCTTGGTGTAGTGTGG 60.020 45.833 0.00 0.00 0.00 4.17
260 261 5.160607 TCCTATTTCCTTGGTGTAGTGTG 57.839 43.478 0.00 0.00 0.00 3.82
261 262 5.836024 TTCCTATTTCCTTGGTGTAGTGT 57.164 39.130 0.00 0.00 0.00 3.55
262 263 5.590259 CCATTCCTATTTCCTTGGTGTAGTG 59.410 44.000 0.00 0.00 0.00 2.74
263 264 5.253096 ACCATTCCTATTTCCTTGGTGTAGT 59.747 40.000 0.00 0.00 36.18 2.73
264 265 5.590259 CACCATTCCTATTTCCTTGGTGTAG 59.410 44.000 10.89 0.00 45.69 2.74
265 266 5.505780 CACCATTCCTATTTCCTTGGTGTA 58.494 41.667 10.89 0.00 45.69 2.90
266 267 4.344104 CACCATTCCTATTTCCTTGGTGT 58.656 43.478 10.89 0.00 45.69 4.16
267 268 4.989279 CACCATTCCTATTTCCTTGGTG 57.011 45.455 5.59 5.59 45.59 4.17
327 328 2.073816 CCTTAAACAACATCGGACGCT 58.926 47.619 0.00 0.00 0.00 5.07
328 329 1.802365 ACCTTAAACAACATCGGACGC 59.198 47.619 0.00 0.00 0.00 5.19
333 334 8.385111 ACGTAATATGAACCTTAAACAACATCG 58.615 33.333 0.00 0.00 0.00 3.84
465 476 7.307989 CCAACGAATATGAGTGAACTTGTTTCT 60.308 37.037 0.00 0.00 34.97 2.52
481 492 8.519799 AGGTTTCATTGAATACCAACGAATAT 57.480 30.769 21.95 6.41 36.91 1.28
499 510 8.093307 TGCTTTAAAATGCATCATAAGGTTTCA 58.907 29.630 0.00 0.00 34.62 2.69
546 561 3.791122 GCTCAGAACACTATAGCGCGTTA 60.791 47.826 8.43 6.54 0.00 3.18
547 562 2.798680 CTCAGAACACTATAGCGCGTT 58.201 47.619 8.43 3.54 0.00 4.84
549 564 1.124462 GCTCAGAACACTATAGCGCG 58.876 55.000 0.00 0.00 0.00 6.86
564 579 2.363788 ATTTAGCGAGACGTTGCTCA 57.636 45.000 13.17 1.78 43.01 4.26
571 586 6.839820 ACCCTAATTTTATTTAGCGAGACG 57.160 37.500 0.00 0.00 0.00 4.18
589 604 9.214957 CACGCTATAATGAATGATTTTACCCTA 57.785 33.333 0.00 0.00 0.00 3.53
601 616 8.567369 CGAAGCTATATCACGCTATAATGAAT 57.433 34.615 0.00 0.00 34.96 2.57
647 662 2.549926 CATGGTAGTATCACAAGCGCA 58.450 47.619 11.47 0.00 0.00 6.09
650 665 6.867662 AAATAGCATGGTAGTATCACAAGC 57.132 37.500 10.82 0.00 0.00 4.01
711 729 7.954447 TGCAATGTTTGTTTGTTTTACAGTAC 58.046 30.769 0.00 0.00 0.00 2.73
742 760 6.241882 TGGGATTCATACTATGTTTTCCGA 57.758 37.500 0.00 0.00 0.00 4.55
744 762 7.147915 TGCTTTGGGATTCATACTATGTTTTCC 60.148 37.037 0.00 2.29 0.00 3.13
818 836 2.513753 CAATTAACAGAGGTGGCACCA 58.486 47.619 36.28 16.05 41.95 4.17
855 893 6.713731 ATAGGGGATATTTCCGGTTATGTT 57.286 37.500 0.00 0.00 43.63 2.71
885 923 0.756903 AATTAGCTACGTGCCCCGAT 59.243 50.000 0.00 0.00 44.23 4.18
934 975 7.148641 AGTTTCTGACTTGAGTATGTAGTGTG 58.851 38.462 0.00 0.00 33.92 3.82
958 1001 5.087397 GCTACGTACACTACACAAGAGAAG 58.913 45.833 0.00 0.00 0.00 2.85
966 1009 3.870419 AGAGCTAGCTACGTACACTACAC 59.130 47.826 19.38 0.00 0.00 2.90
967 1010 4.134379 AGAGCTAGCTACGTACACTACA 57.866 45.455 19.38 0.00 0.00 2.74
968 1011 4.685628 CCTAGAGCTAGCTACGTACACTAC 59.314 50.000 19.38 0.40 31.95 2.73
969 1012 4.798924 GCCTAGAGCTAGCTACGTACACTA 60.799 50.000 19.38 11.68 38.99 2.74
970 1013 3.731089 CCTAGAGCTAGCTACGTACACT 58.269 50.000 19.38 11.10 31.95 3.55
971 1014 2.223845 GCCTAGAGCTAGCTACGTACAC 59.776 54.545 19.38 2.88 38.99 2.90
975 1018 2.156098 GATGCCTAGAGCTAGCTACGT 58.844 52.381 19.38 8.11 44.23 3.57
1004 1051 8.416110 GAAGACATGCTTGGATGATGTCATCG 62.416 46.154 14.83 4.92 45.63 3.84
1005 1052 5.277876 GAAGACATGCTTGGATGATGTCATC 60.278 44.000 13.34 13.34 45.63 2.92
1050 1097 2.476499 GCGGCGAAGAAGAGCAAC 59.524 61.111 12.98 0.00 34.54 4.17
1063 1110 2.740714 CTGTAACAAGAGCCGCGGC 61.741 63.158 42.34 42.34 42.33 6.53
1152 1199 3.894547 TTCTTTGGAGACGGCGGCC 62.895 63.158 10.28 9.54 0.00 6.13
1296 1343 0.670546 CACAGCCCTGTACAAGTCCG 60.671 60.000 0.00 0.00 42.83 4.79
1320 1367 2.887568 CCATCGAGCAGCACCGAC 60.888 66.667 11.39 0.00 37.64 4.79
1423 1470 4.389576 CACCTTGGCGCACGCTTC 62.390 66.667 15.36 0.00 41.60 3.86
1428 1475 3.660111 GACACCACCTTGGCGCAC 61.660 66.667 10.83 0.00 42.67 5.34
1452 1499 4.194720 GCGACGGCGAGGATGTCT 62.195 66.667 18.90 0.00 40.82 3.41
1516 1563 7.269937 CGTAGTTTTGAGCTTTGATCTGAATTG 59.730 37.037 0.00 0.00 0.00 2.32
1530 1577 4.727235 AAGCAAGTACGTAGTTTTGAGC 57.273 40.909 12.99 12.88 37.78 4.26
1953 2008 2.913578 TGCAGCAGGCCCTTGTTG 60.914 61.111 0.00 0.97 43.89 3.33
2043 2098 3.676605 TCGTCGAAGAAGCCGGCA 61.677 61.111 31.54 1.71 39.69 5.69
2109 2164 4.803426 CTGACCTGCCCGCTCGAC 62.803 72.222 0.00 0.00 0.00 4.20
2196 2259 3.560896 TCATCACACACACAACATGACAG 59.439 43.478 0.00 0.00 0.00 3.51
2368 2447 5.869753 AATTGAAAGATCTGGTTCGTCTG 57.130 39.130 0.00 0.00 0.00 3.51
2373 2452 6.150140 AGCACACTAATTGAAAGATCTGGTTC 59.850 38.462 0.00 0.00 0.00 3.62
2391 2470 3.179443 TCTTCGAACTTTCAGCACACT 57.821 42.857 0.00 0.00 0.00 3.55
2418 2497 1.133025 CAAATTAGGCCCAGCTCGTTG 59.867 52.381 0.00 0.00 0.00 4.10
2568 2648 8.391106 GCAATGTGGTACTAATCAGAACTTAAG 58.609 37.037 0.00 0.00 0.00 1.85
2599 2679 3.134804 CCCCACCGACTCTTCTTTCATAT 59.865 47.826 0.00 0.00 0.00 1.78
2602 2682 0.685097 CCCCACCGACTCTTCTTTCA 59.315 55.000 0.00 0.00 0.00 2.69
2649 2729 3.608506 CGAGAAAGGTATGACTTGTCGTG 59.391 47.826 5.80 0.00 35.06 4.35
2650 2730 3.367087 CCGAGAAAGGTATGACTTGTCGT 60.367 47.826 0.99 0.99 36.64 4.34
2651 2731 3.179830 CCGAGAAAGGTATGACTTGTCG 58.820 50.000 0.00 0.00 37.43 4.35
2652 2732 4.082136 AGACCGAGAAAGGTATGACTTGTC 60.082 45.833 0.00 0.00 46.09 3.18
2653 2733 3.833070 AGACCGAGAAAGGTATGACTTGT 59.167 43.478 0.00 0.00 46.09 3.16
2663 2743 1.897560 AGCCAAAAGACCGAGAAAGG 58.102 50.000 0.00 0.00 37.30 3.11
2665 2745 4.280436 TCATAGCCAAAAGACCGAGAAA 57.720 40.909 0.00 0.00 0.00 2.52
2671 2751 6.212888 ACATTTGATCATAGCCAAAAGACC 57.787 37.500 0.00 0.00 36.10 3.85
2673 2753 9.109393 GTACTACATTTGATCATAGCCAAAAGA 57.891 33.333 0.00 0.00 36.10 2.52
2678 2758 6.099701 ACAGGTACTACATTTGATCATAGCCA 59.900 38.462 0.00 0.00 36.02 4.75
2680 2760 7.928706 AGAACAGGTACTACATTTGATCATAGC 59.071 37.037 0.00 0.00 36.02 2.97
2684 2764 9.817809 GATAAGAACAGGTACTACATTTGATCA 57.182 33.333 0.00 0.00 36.02 2.92
2685 2765 9.817809 TGATAAGAACAGGTACTACATTTGATC 57.182 33.333 0.00 0.00 36.02 2.92
2721 2801 2.351726 GCACGGGCAATTGTCTAGTTAG 59.648 50.000 3.77 1.83 40.72 2.34
2723 2803 1.165270 GCACGGGCAATTGTCTAGTT 58.835 50.000 3.77 0.00 40.72 2.24
2728 2808 0.453782 GTAACGCACGGGCAATTGTC 60.454 55.000 11.77 3.95 41.24 3.18
2730 2811 0.039978 TTGTAACGCACGGGCAATTG 60.040 50.000 11.77 0.00 41.24 2.32
2733 2814 2.883468 CGTTGTAACGCACGGGCAA 61.883 57.895 11.77 0.00 46.06 4.52
2734 2815 3.339464 CGTTGTAACGCACGGGCA 61.339 61.111 11.77 0.00 46.06 5.36
2756 2837 9.305555 ACGGGCTAATCTACTAGAATGTTTATA 57.694 33.333 0.00 0.00 0.00 0.98
2757 2838 8.088981 CACGGGCTAATCTACTAGAATGTTTAT 58.911 37.037 0.00 0.00 0.00 1.40
2758 2839 7.286087 TCACGGGCTAATCTACTAGAATGTTTA 59.714 37.037 0.00 0.00 0.00 2.01
2759 2840 6.097839 TCACGGGCTAATCTACTAGAATGTTT 59.902 38.462 0.00 0.00 0.00 2.83
2760 2841 5.597182 TCACGGGCTAATCTACTAGAATGTT 59.403 40.000 0.00 0.00 0.00 2.71
2761 2842 5.009811 GTCACGGGCTAATCTACTAGAATGT 59.990 44.000 0.00 0.00 0.00 2.71
2762 2843 5.462405 GTCACGGGCTAATCTACTAGAATG 58.538 45.833 0.00 0.00 0.00 2.67
2763 2844 4.215827 CGTCACGGGCTAATCTACTAGAAT 59.784 45.833 0.00 0.00 0.00 2.40
2764 2845 3.562973 CGTCACGGGCTAATCTACTAGAA 59.437 47.826 0.00 0.00 0.00 2.10
2765 2846 3.136763 CGTCACGGGCTAATCTACTAGA 58.863 50.000 0.00 0.00 0.00 2.43
2766 2847 2.225963 CCGTCACGGGCTAATCTACTAG 59.774 54.545 8.94 0.00 44.15 2.57
2767 2848 2.224606 CCGTCACGGGCTAATCTACTA 58.775 52.381 8.94 0.00 44.15 1.82
2768 2849 1.030457 CCGTCACGGGCTAATCTACT 58.970 55.000 8.94 0.00 44.15 2.57
2769 2850 3.564455 CCGTCACGGGCTAATCTAC 57.436 57.895 8.94 0.00 44.15 2.59
2784 2865 2.728690 TATAATAATGGACGCGCCGT 57.271 45.000 5.73 7.32 45.10 5.68
2785 2866 3.615056 TCAATATAATAATGGACGCGCCG 59.385 43.478 5.73 0.00 40.66 6.46
2786 2867 4.491924 CGTCAATATAATAATGGACGCGCC 60.492 45.833 5.73 9.63 41.05 6.53
2787 2868 4.565229 CGTCAATATAATAATGGACGCGC 58.435 43.478 5.73 0.00 41.05 6.86
2791 2872 5.779806 AGCGCGTCAATATAATAATGGAC 57.220 39.130 8.43 0.00 0.00 4.02
2792 2873 7.892778 TTTAGCGCGTCAATATAATAATGGA 57.107 32.000 8.43 0.00 0.00 3.41
2817 2898 9.616634 CGATTGCATACAAGAATTTGCTAATAT 57.383 29.630 0.00 0.00 39.69 1.28
2818 2899 7.591057 GCGATTGCATACAAGAATTTGCTAATA 59.409 33.333 0.00 0.00 39.69 0.98
2819 2900 6.418819 GCGATTGCATACAAGAATTTGCTAAT 59.581 34.615 0.00 0.00 39.69 1.73
2820 2901 5.743398 GCGATTGCATACAAGAATTTGCTAA 59.257 36.000 0.00 0.00 39.69 3.09
2821 2902 5.273170 GCGATTGCATACAAGAATTTGCTA 58.727 37.500 0.00 0.00 39.69 3.49
2822 2903 4.107622 GCGATTGCATACAAGAATTTGCT 58.892 39.130 0.00 0.00 39.69 3.91
2823 2904 3.243643 GGCGATTGCATACAAGAATTTGC 59.756 43.478 7.38 0.00 45.35 3.68
2824 2905 4.422840 TGGCGATTGCATACAAGAATTTG 58.577 39.130 7.38 0.00 45.35 2.32
2825 2906 4.717233 TGGCGATTGCATACAAGAATTT 57.283 36.364 7.38 0.00 45.35 1.82
2826 2907 4.338964 TCATGGCGATTGCATACAAGAATT 59.661 37.500 7.38 0.00 45.35 2.17
2827 2908 3.884693 TCATGGCGATTGCATACAAGAAT 59.115 39.130 7.38 0.00 45.35 2.40
2828 2909 3.277715 TCATGGCGATTGCATACAAGAA 58.722 40.909 7.38 0.00 45.35 2.52
2829 2910 2.916640 TCATGGCGATTGCATACAAGA 58.083 42.857 7.38 0.00 45.35 3.02
2830 2911 3.909776 ATCATGGCGATTGCATACAAG 57.090 42.857 7.38 0.00 45.35 3.16
2831 2912 4.652421 AAATCATGGCGATTGCATACAA 57.348 36.364 7.38 0.00 43.83 2.41
2832 2913 5.963176 ATAAATCATGGCGATTGCATACA 57.037 34.783 7.38 0.00 43.83 2.29
2833 2914 6.642131 ACAAATAAATCATGGCGATTGCATAC 59.358 34.615 7.38 0.00 43.83 2.39
2834 2915 6.747125 ACAAATAAATCATGGCGATTGCATA 58.253 32.000 7.38 0.00 43.83 3.14
2835 2916 5.603596 ACAAATAAATCATGGCGATTGCAT 58.396 33.333 7.38 0.00 43.83 3.96
2836 2917 5.008619 ACAAATAAATCATGGCGATTGCA 57.991 34.783 7.38 0.00 43.83 4.08
2837 2918 5.042593 TGACAAATAAATCATGGCGATTGC 58.957 37.500 0.00 0.00 43.83 3.56
2838 2919 7.703298 AATGACAAATAAATCATGGCGATTG 57.297 32.000 0.00 0.00 43.83 2.67
2839 2920 8.721019 AAAATGACAAATAAATCATGGCGATT 57.279 26.923 0.00 0.00 46.70 3.34
2840 2921 9.985730 ATAAAATGACAAATAAATCATGGCGAT 57.014 25.926 0.00 0.00 35.71 4.58
2841 2922 9.814899 AATAAAATGACAAATAAATCATGGCGA 57.185 25.926 0.00 0.00 35.71 5.54
2842 2923 9.852481 CAATAAAATGACAAATAAATCATGGCG 57.148 29.630 0.00 0.00 35.71 5.69
2944 3025 9.627123 CTCCCTAAAATAGAACCAATTGTATCA 57.373 33.333 4.43 0.00 0.00 2.15
2945 3026 9.067986 CCTCCCTAAAATAGAACCAATTGTATC 57.932 37.037 4.43 2.26 0.00 2.24
2946 3027 8.787818 TCCTCCCTAAAATAGAACCAATTGTAT 58.212 33.333 4.43 0.00 0.00 2.29
2947 3028 8.165267 TCCTCCCTAAAATAGAACCAATTGTA 57.835 34.615 4.43 0.00 0.00 2.41
2948 3029 7.039722 TCCTCCCTAAAATAGAACCAATTGT 57.960 36.000 4.43 0.00 0.00 2.71
2949 3030 7.014615 CCATCCTCCCTAAAATAGAACCAATTG 59.985 40.741 0.00 0.00 0.00 2.32
2950 3031 7.069344 CCATCCTCCCTAAAATAGAACCAATT 58.931 38.462 0.00 0.00 0.00 2.32
2951 3032 6.392842 TCCATCCTCCCTAAAATAGAACCAAT 59.607 38.462 0.00 0.00 0.00 3.16
2952 3033 5.734140 TCCATCCTCCCTAAAATAGAACCAA 59.266 40.000 0.00 0.00 0.00 3.67
2953 3034 5.293643 TCCATCCTCCCTAAAATAGAACCA 58.706 41.667 0.00 0.00 0.00 3.67
2954 3035 5.906772 TCCATCCTCCCTAAAATAGAACC 57.093 43.478 0.00 0.00 0.00 3.62
2955 3036 6.241645 CCATCCATCCTCCCTAAAATAGAAC 58.758 44.000 0.00 0.00 0.00 3.01
2956 3037 5.313240 CCCATCCATCCTCCCTAAAATAGAA 59.687 44.000 0.00 0.00 0.00 2.10
2957 3038 4.852118 CCCATCCATCCTCCCTAAAATAGA 59.148 45.833 0.00 0.00 0.00 1.98
2958 3039 4.852118 TCCCATCCATCCTCCCTAAAATAG 59.148 45.833 0.00 0.00 0.00 1.73
2959 3040 4.850328 TCCCATCCATCCTCCCTAAAATA 58.150 43.478 0.00 0.00 0.00 1.40
2960 3041 3.659686 CTCCCATCCATCCTCCCTAAAAT 59.340 47.826 0.00 0.00 0.00 1.82
2961 3042 3.056080 CTCCCATCCATCCTCCCTAAAA 58.944 50.000 0.00 0.00 0.00 1.52
2962 3043 2.252676 TCTCCCATCCATCCTCCCTAAA 59.747 50.000 0.00 0.00 0.00 1.85
2963 3044 1.873049 TCTCCCATCCATCCTCCCTAA 59.127 52.381 0.00 0.00 0.00 2.69
2964 3045 1.557681 TCTCCCATCCATCCTCCCTA 58.442 55.000 0.00 0.00 0.00 3.53
2965 3046 0.649992 TTCTCCCATCCATCCTCCCT 59.350 55.000 0.00 0.00 0.00 4.20
2966 3047 1.522900 TTTCTCCCATCCATCCTCCC 58.477 55.000 0.00 0.00 0.00 4.30
2967 3048 3.669939 TTTTTCTCCCATCCATCCTCC 57.330 47.619 0.00 0.00 0.00 4.30
2968 3049 4.796606 TGATTTTTCTCCCATCCATCCTC 58.203 43.478 0.00 0.00 0.00 3.71
2969 3050 4.479796 TCTGATTTTTCTCCCATCCATCCT 59.520 41.667 0.00 0.00 0.00 3.24
2970 3051 4.796606 TCTGATTTTTCTCCCATCCATCC 58.203 43.478 0.00 0.00 0.00 3.51
2971 3052 5.688807 TCTCTGATTTTTCTCCCATCCATC 58.311 41.667 0.00 0.00 0.00 3.51
2972 3053 5.722172 TCTCTGATTTTTCTCCCATCCAT 57.278 39.130 0.00 0.00 0.00 3.41
2973 3054 5.192321 TCATCTCTGATTTTTCTCCCATCCA 59.808 40.000 0.00 0.00 0.00 3.41
2974 3055 5.688807 TCATCTCTGATTTTTCTCCCATCC 58.311 41.667 0.00 0.00 0.00 3.51
2975 3056 6.590068 TCTCATCTCTGATTTTTCTCCCATC 58.410 40.000 0.00 0.00 0.00 3.51
2976 3057 6.386342 TCTCTCATCTCTGATTTTTCTCCCAT 59.614 38.462 0.00 0.00 0.00 4.00
2977 3058 5.723405 TCTCTCATCTCTGATTTTTCTCCCA 59.277 40.000 0.00 0.00 0.00 4.37
2978 3059 6.232581 TCTCTCATCTCTGATTTTTCTCCC 57.767 41.667 0.00 0.00 0.00 4.30
2979 3060 8.558973 TTTTCTCTCATCTCTGATTTTTCTCC 57.441 34.615 0.00 0.00 0.00 3.71
3004 3085 8.526978 GCTCTTTCCATCTCCTCTTTTAATTTT 58.473 33.333 0.00 0.00 0.00 1.82
3005 3086 7.148171 CGCTCTTTCCATCTCCTCTTTTAATTT 60.148 37.037 0.00 0.00 0.00 1.82
3006 3087 6.317391 CGCTCTTTCCATCTCCTCTTTTAATT 59.683 38.462 0.00 0.00 0.00 1.40
3007 3088 5.819901 CGCTCTTTCCATCTCCTCTTTTAAT 59.180 40.000 0.00 0.00 0.00 1.40
3008 3089 5.178797 CGCTCTTTCCATCTCCTCTTTTAA 58.821 41.667 0.00 0.00 0.00 1.52
3009 3090 4.383118 CCGCTCTTTCCATCTCCTCTTTTA 60.383 45.833 0.00 0.00 0.00 1.52
3010 3091 3.604582 CGCTCTTTCCATCTCCTCTTTT 58.395 45.455 0.00 0.00 0.00 2.27
3011 3092 2.093235 CCGCTCTTTCCATCTCCTCTTT 60.093 50.000 0.00 0.00 0.00 2.52
3012 3093 1.484240 CCGCTCTTTCCATCTCCTCTT 59.516 52.381 0.00 0.00 0.00 2.85
3013 3094 1.118838 CCGCTCTTTCCATCTCCTCT 58.881 55.000 0.00 0.00 0.00 3.69
3014 3095 1.115467 TCCGCTCTTTCCATCTCCTC 58.885 55.000 0.00 0.00 0.00 3.71
3015 3096 1.208293 GTTCCGCTCTTTCCATCTCCT 59.792 52.381 0.00 0.00 0.00 3.69
3016 3097 1.066143 TGTTCCGCTCTTTCCATCTCC 60.066 52.381 0.00 0.00 0.00 3.71
3017 3098 2.386661 TGTTCCGCTCTTTCCATCTC 57.613 50.000 0.00 0.00 0.00 2.75
3018 3099 4.696479 ATATGTTCCGCTCTTTCCATCT 57.304 40.909 0.00 0.00 0.00 2.90
3019 3100 5.297547 TGTATATGTTCCGCTCTTTCCATC 58.702 41.667 0.00 0.00 0.00 3.51
3020 3101 5.290493 TGTATATGTTCCGCTCTTTCCAT 57.710 39.130 0.00 0.00 0.00 3.41
3021 3102 4.746535 TGTATATGTTCCGCTCTTTCCA 57.253 40.909 0.00 0.00 0.00 3.53
3022 3103 4.511826 CCTTGTATATGTTCCGCTCTTTCC 59.488 45.833 0.00 0.00 0.00 3.13
3023 3104 5.357257 TCCTTGTATATGTTCCGCTCTTTC 58.643 41.667 0.00 0.00 0.00 2.62
3024 3105 5.353394 TCCTTGTATATGTTCCGCTCTTT 57.647 39.130 0.00 0.00 0.00 2.52
3025 3106 5.353394 TTCCTTGTATATGTTCCGCTCTT 57.647 39.130 0.00 0.00 0.00 2.85
3026 3107 4.202264 CCTTCCTTGTATATGTTCCGCTCT 60.202 45.833 0.00 0.00 0.00 4.09
3027 3108 4.058817 CCTTCCTTGTATATGTTCCGCTC 58.941 47.826 0.00 0.00 0.00 5.03
3028 3109 3.454812 ACCTTCCTTGTATATGTTCCGCT 59.545 43.478 0.00 0.00 0.00 5.52
3029 3110 3.805207 ACCTTCCTTGTATATGTTCCGC 58.195 45.455 0.00 0.00 0.00 5.54
3030 3111 4.574828 CCAACCTTCCTTGTATATGTTCCG 59.425 45.833 0.00 0.00 0.00 4.30
3031 3112 5.589050 GTCCAACCTTCCTTGTATATGTTCC 59.411 44.000 0.00 0.00 0.00 3.62
3032 3113 5.293569 CGTCCAACCTTCCTTGTATATGTTC 59.706 44.000 0.00 0.00 0.00 3.18
3033 3114 5.046159 TCGTCCAACCTTCCTTGTATATGTT 60.046 40.000 0.00 0.00 0.00 2.71
3034 3115 4.468510 TCGTCCAACCTTCCTTGTATATGT 59.531 41.667 0.00 0.00 0.00 2.29
3035 3116 5.018539 TCGTCCAACCTTCCTTGTATATG 57.981 43.478 0.00 0.00 0.00 1.78
3036 3117 5.687166 TTCGTCCAACCTTCCTTGTATAT 57.313 39.130 0.00 0.00 0.00 0.86
3037 3118 5.486735 TTTCGTCCAACCTTCCTTGTATA 57.513 39.130 0.00 0.00 0.00 1.47
3038 3119 4.360951 TTTCGTCCAACCTTCCTTGTAT 57.639 40.909 0.00 0.00 0.00 2.29
3039 3120 3.842007 TTTCGTCCAACCTTCCTTGTA 57.158 42.857 0.00 0.00 0.00 2.41
3040 3121 2.721425 TTTCGTCCAACCTTCCTTGT 57.279 45.000 0.00 0.00 0.00 3.16
3041 3122 3.630312 TCTTTTTCGTCCAACCTTCCTTG 59.370 43.478 0.00 0.00 0.00 3.61
3042 3123 3.883489 CTCTTTTTCGTCCAACCTTCCTT 59.117 43.478 0.00 0.00 0.00 3.36
3043 3124 3.477530 CTCTTTTTCGTCCAACCTTCCT 58.522 45.455 0.00 0.00 0.00 3.36
3044 3125 2.552743 CCTCTTTTTCGTCCAACCTTCC 59.447 50.000 0.00 0.00 0.00 3.46
3045 3126 3.003378 CACCTCTTTTTCGTCCAACCTTC 59.997 47.826 0.00 0.00 0.00 3.46
3046 3127 2.949644 CACCTCTTTTTCGTCCAACCTT 59.050 45.455 0.00 0.00 0.00 3.50
3047 3128 2.171870 TCACCTCTTTTTCGTCCAACCT 59.828 45.455 0.00 0.00 0.00 3.50
3048 3129 2.567985 TCACCTCTTTTTCGTCCAACC 58.432 47.619 0.00 0.00 0.00 3.77
3049 3130 3.626217 ACTTCACCTCTTTTTCGTCCAAC 59.374 43.478 0.00 0.00 0.00 3.77
3050 3131 3.625764 CACTTCACCTCTTTTTCGTCCAA 59.374 43.478 0.00 0.00 0.00 3.53
3051 3132 3.202906 CACTTCACCTCTTTTTCGTCCA 58.797 45.455 0.00 0.00 0.00 4.02
3052 3133 2.548480 CCACTTCACCTCTTTTTCGTCC 59.452 50.000 0.00 0.00 0.00 4.79
3053 3134 2.548480 CCCACTTCACCTCTTTTTCGTC 59.452 50.000 0.00 0.00 0.00 4.20
3054 3135 2.171870 TCCCACTTCACCTCTTTTTCGT 59.828 45.455 0.00 0.00 0.00 3.85
3055 3136 2.846193 TCCCACTTCACCTCTTTTTCG 58.154 47.619 0.00 0.00 0.00 3.46
3056 3137 4.645136 AGTTTCCCACTTCACCTCTTTTTC 59.355 41.667 0.00 0.00 27.32 2.29
3057 3138 4.610333 AGTTTCCCACTTCACCTCTTTTT 58.390 39.130 0.00 0.00 27.32 1.94
3058 3139 4.251103 AGTTTCCCACTTCACCTCTTTT 57.749 40.909 0.00 0.00 27.32 2.27
3059 3140 3.953542 AGTTTCCCACTTCACCTCTTT 57.046 42.857 0.00 0.00 27.32 2.52
3060 3141 3.953542 AAGTTTCCCACTTCACCTCTT 57.046 42.857 0.00 0.00 42.62 2.85
3061 3142 4.351111 ACATAAGTTTCCCACTTCACCTCT 59.649 41.667 0.00 0.00 42.62 3.69
3062 3143 4.652822 ACATAAGTTTCCCACTTCACCTC 58.347 43.478 0.00 0.00 42.62 3.85
3063 3144 4.724279 ACATAAGTTTCCCACTTCACCT 57.276 40.909 0.00 0.00 42.62 4.00
3064 3145 5.070685 AGAACATAAGTTTCCCACTTCACC 58.929 41.667 0.00 0.00 42.62 4.02
3065 3146 6.635030 AAGAACATAAGTTTCCCACTTCAC 57.365 37.500 0.00 0.00 42.62 3.18
3066 3147 7.654022 AAAAGAACATAAGTTTCCCACTTCA 57.346 32.000 0.00 0.00 42.62 3.02
3069 3150 9.197306 ACTTAAAAAGAACATAAGTTTCCCACT 57.803 29.630 0.00 0.00 36.70 4.00
3090 3171 9.409918 AGCACATCAATCTCTACTACTACTTAA 57.590 33.333 0.00 0.00 0.00 1.85
3091 3172 8.982091 AGCACATCAATCTCTACTACTACTTA 57.018 34.615 0.00 0.00 0.00 2.24
3092 3173 7.889873 AGCACATCAATCTCTACTACTACTT 57.110 36.000 0.00 0.00 0.00 2.24
3093 3174 8.982091 TTAGCACATCAATCTCTACTACTACT 57.018 34.615 0.00 0.00 0.00 2.57
3096 3177 9.757227 GATTTTAGCACATCAATCTCTACTACT 57.243 33.333 0.00 0.00 0.00 2.57
3097 3178 9.757227 AGATTTTAGCACATCAATCTCTACTAC 57.243 33.333 0.00 0.00 31.59 2.73
3117 3198 9.762933 TGCATAAAGAAAACTTGCTAAGATTTT 57.237 25.926 3.37 6.13 34.21 1.82
3118 3199 9.762933 TTGCATAAAGAAAACTTGCTAAGATTT 57.237 25.926 0.00 4.05 36.38 2.17
3119 3200 9.933723 ATTGCATAAAGAAAACTTGCTAAGATT 57.066 25.926 0.00 0.00 34.47 2.40
3120 3201 9.578439 GATTGCATAAAGAAAACTTGCTAAGAT 57.422 29.630 0.00 0.00 34.47 2.40
3121 3202 7.750458 CGATTGCATAAAGAAAACTTGCTAAGA 59.250 33.333 0.00 0.00 34.47 2.10
3122 3203 7.461938 GCGATTGCATAAAGAAAACTTGCTAAG 60.462 37.037 0.00 0.00 42.15 2.18
3123 3204 6.307800 GCGATTGCATAAAGAAAACTTGCTAA 59.692 34.615 0.00 0.00 42.15 3.09
3124 3205 5.799936 GCGATTGCATAAAGAAAACTTGCTA 59.200 36.000 0.00 0.00 42.15 3.49
3125 3206 4.622740 GCGATTGCATAAAGAAAACTTGCT 59.377 37.500 0.00 0.00 42.15 3.91
3126 3207 4.201618 GGCGATTGCATAAAGAAAACTTGC 60.202 41.667 7.38 0.00 45.35 4.01
3127 3208 4.922692 TGGCGATTGCATAAAGAAAACTTG 59.077 37.500 7.38 0.00 45.35 3.16
3128 3209 5.132897 TGGCGATTGCATAAAGAAAACTT 57.867 34.783 7.38 0.00 45.35 2.66
3129 3210 4.782019 TGGCGATTGCATAAAGAAAACT 57.218 36.364 7.38 0.00 45.35 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.