Multiple sequence alignment - TraesCS2B01G537100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G537100 chr2B 100.000 4329 0 0 1 4329 732571360 732567032 0.000000e+00 7995.0
1 TraesCS2B01G537100 chr2B 100.000 284 0 0 4648 4931 732566713 732566430 4.370000e-145 525.0
2 TraesCS2B01G537100 chr2D 93.217 2816 98 35 1441 4183 602453046 602450251 0.000000e+00 4056.0
3 TraesCS2B01G537100 chr2D 88.585 1463 81 24 1 1403 602454488 602453052 0.000000e+00 1698.0
4 TraesCS2B01G537100 chr2D 77.603 1143 242 12 2708 3846 651648800 651649932 0.000000e+00 680.0
5 TraesCS2B01G537100 chr2A 89.146 1898 75 38 1 1810 734926709 734924855 0.000000e+00 2242.0
6 TraesCS2B01G537100 chr1D 84.901 1265 180 11 2701 3960 100661891 100663149 0.000000e+00 1267.0
7 TraesCS2B01G537100 chr1D 78.897 526 77 20 2181 2693 100661310 100661814 4.760000e-85 326.0
8 TraesCS2B01G537100 chr1D 100.000 29 0 0 4218 4246 469391449 469391421 2.000000e-03 54.7
9 TraesCS2B01G537100 chr1A 84.897 1258 182 8 2707 3960 104921314 104920061 0.000000e+00 1264.0
10 TraesCS2B01G537100 chr1A 78.676 544 79 24 2181 2693 104921932 104921395 1.320000e-85 327.0
11 TraesCS2B01G537100 chr1B 84.897 1258 181 9 2707 3960 151070707 151069455 0.000000e+00 1262.0
12 TraesCS2B01G537100 chr1B 77.757 535 89 24 2181 2696 151071315 151070792 8.020000e-78 302.0
13 TraesCS2B01G537100 chr5A 77.283 1391 281 28 2515 3889 400418527 400419898 0.000000e+00 785.0
14 TraesCS2B01G537100 chr5A 77.329 1385 279 28 2521 3889 400495082 400493717 0.000000e+00 785.0
15 TraesCS2B01G537100 chr5D 77.011 1392 283 27 2515 3889 298718966 298720337 0.000000e+00 763.0
16 TraesCS2B01G537100 chrUn 77.372 1149 240 19 2708 3849 23653088 23651953 0.000000e+00 664.0
17 TraesCS2B01G537100 chr3B 78.927 261 50 5 4666 4923 315388082 315387824 6.560000e-39 172.0
18 TraesCS2B01G537100 chr7B 75.949 158 25 11 20 174 22895573 22895720 8.860000e-08 69.4
19 TraesCS2B01G537100 chr7B 76.692 133 20 7 20 148 22676060 22676185 4.120000e-06 63.9
20 TraesCS2B01G537100 chr7B 82.667 75 10 3 20 93 22712572 22712644 4.120000e-06 63.9
21 TraesCS2B01G537100 chr7B 82.667 75 10 3 20 93 22836235 22836307 4.120000e-06 63.9
22 TraesCS2B01G537100 chr7B 74.684 158 27 11 20 174 22774456 22774603 1.920000e-04 58.4
23 TraesCS2B01G537100 chr7B 80.000 80 12 4 20 98 22716264 22716340 6.900000e-04 56.5
24 TraesCS2B01G537100 chr7B 92.500 40 1 2 20 58 22898636 22898674 6.900000e-04 56.5
25 TraesCS2B01G537100 chr7B 80.000 80 12 4 20 98 22969783 22969859 6.900000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G537100 chr2B 732566430 732571360 4930 True 4260.0 7995 100.0000 1 4931 2 chr2B.!!$R1 4930
1 TraesCS2B01G537100 chr2D 602450251 602454488 4237 True 2877.0 4056 90.9010 1 4183 2 chr2D.!!$R1 4182
2 TraesCS2B01G537100 chr2D 651648800 651649932 1132 False 680.0 680 77.6030 2708 3846 1 chr2D.!!$F1 1138
3 TraesCS2B01G537100 chr2A 734924855 734926709 1854 True 2242.0 2242 89.1460 1 1810 1 chr2A.!!$R1 1809
4 TraesCS2B01G537100 chr1D 100661310 100663149 1839 False 796.5 1267 81.8990 2181 3960 2 chr1D.!!$F1 1779
5 TraesCS2B01G537100 chr1A 104920061 104921932 1871 True 795.5 1264 81.7865 2181 3960 2 chr1A.!!$R1 1779
6 TraesCS2B01G537100 chr1B 151069455 151071315 1860 True 782.0 1262 81.3270 2181 3960 2 chr1B.!!$R1 1779
7 TraesCS2B01G537100 chr5A 400418527 400419898 1371 False 785.0 785 77.2830 2515 3889 1 chr5A.!!$F1 1374
8 TraesCS2B01G537100 chr5A 400493717 400495082 1365 True 785.0 785 77.3290 2521 3889 1 chr5A.!!$R1 1368
9 TraesCS2B01G537100 chr5D 298718966 298720337 1371 False 763.0 763 77.0110 2515 3889 1 chr5D.!!$F1 1374
10 TraesCS2B01G537100 chrUn 23651953 23653088 1135 True 664.0 664 77.3720 2708 3849 1 chrUn.!!$R1 1141

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
833 870 0.674895 CCTCCTGCCTTGTCTTTCGG 60.675 60.000 0.0 0.0 0.00 4.30 F
940 981 1.134280 CCTCGCCATCTCCATCAACTT 60.134 52.381 0.0 0.0 0.00 2.66 F
1875 1973 3.189910 TGAGCATGACAAATCTGCTTCAC 59.810 43.478 0.0 0.0 45.79 3.18 F
3351 3604 0.108992 TCATGAACGAGTACGGCACC 60.109 55.000 0.0 0.0 44.46 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1888 1986 0.242017 GCGAGCACAGCAATTTCCTT 59.758 50.0 0.00 0.00 34.19 3.36 R
2124 2225 1.418334 AATCCTAGACATCCAGCGCT 58.582 50.0 2.64 2.64 0.00 5.92 R
3813 4066 0.599060 TGAACGTGTACTCGCCATGA 59.401 50.0 16.66 0.00 0.00 3.07 R
4836 5102 0.035056 AGTTGATCTTCCGGGCAAGG 60.035 55.0 0.00 0.00 0.00 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 109 3.910568 AAAATTACCGACCGGATACCA 57.089 42.857 16.07 0.00 38.96 3.25
108 110 3.910568 AAATTACCGACCGGATACCAA 57.089 42.857 16.07 0.00 38.96 3.67
110 112 5.549742 AAATTACCGACCGGATACCAATA 57.450 39.130 16.07 0.00 38.96 1.90
111 113 4.525912 ATTACCGACCGGATACCAATAC 57.474 45.455 16.07 0.00 38.96 1.89
112 114 1.043022 ACCGACCGGATACCAATACC 58.957 55.000 16.07 0.00 38.96 2.73
113 115 1.042229 CCGACCGGATACCAATACCA 58.958 55.000 9.46 0.00 37.50 3.25
114 116 1.621814 CCGACCGGATACCAATACCAT 59.378 52.381 9.46 0.00 37.50 3.55
115 117 2.038033 CCGACCGGATACCAATACCATT 59.962 50.000 9.46 0.00 37.50 3.16
116 118 3.323243 CGACCGGATACCAATACCATTC 58.677 50.000 9.46 0.00 0.00 2.67
352 361 2.346545 GGTTGGTACGTACATTTCTCGC 59.653 50.000 26.02 7.62 0.00 5.03
491 518 9.650714 TGGATTTCTGATTCAATTGGATATTCT 57.349 29.630 5.42 0.00 0.00 2.40
541 568 8.011844 TGAGTTGATTAGCTAGCAATCTTCTA 57.988 34.615 26.14 13.21 34.21 2.10
590 617 9.882996 CAAAGTACGATACCGAGTATTTATACA 57.117 33.333 0.00 0.00 39.50 2.29
592 619 8.034058 AGTACGATACCGAGTATTTATACACC 57.966 38.462 0.00 0.00 39.50 4.16
669 701 6.875753 TCATTTGCATTTGTGTCGATTTTTC 58.124 32.000 0.00 0.00 0.00 2.29
794 831 4.157289 AGCAAGATTTAACTGCATCCACAG 59.843 41.667 0.00 0.00 43.59 3.66
833 870 0.674895 CCTCCTGCCTTGTCTTTCGG 60.675 60.000 0.00 0.00 0.00 4.30
887 928 2.810852 GCCACCTTGTTCTTCTCAAGAG 59.189 50.000 7.16 0.00 43.17 2.85
940 981 1.134280 CCTCGCCATCTCCATCAACTT 60.134 52.381 0.00 0.00 0.00 2.66
966 1009 4.099266 CCATCTCTCCAGTTCAGTAGAAGG 59.901 50.000 0.00 0.00 33.63 3.46
971 1014 4.017037 TCTCCAGTTCAGTAGAAGGAGGAT 60.017 45.833 0.00 0.00 42.35 3.24
980 1023 6.231951 TCAGTAGAAGGAGGATCATACGTAG 58.768 44.000 0.08 0.00 36.25 3.51
981 1024 6.042897 TCAGTAGAAGGAGGATCATACGTAGA 59.957 42.308 0.08 0.00 36.25 2.59
982 1025 6.148150 CAGTAGAAGGAGGATCATACGTAGAC 59.852 46.154 0.08 0.00 36.25 2.59
1085 1144 4.142600 ACTTTATCTTGCGCATTCCAGTTC 60.143 41.667 12.75 0.00 0.00 3.01
1256 1334 5.835113 ATTGGATTGGATTTGTTACTCCG 57.165 39.130 0.00 0.00 34.05 4.63
1267 1345 8.265055 TGGATTTGTTACTCCGAAGAAAGATAT 58.735 33.333 0.00 0.00 34.05 1.63
1268 1346 9.110502 GGATTTGTTACTCCGAAGAAAGATATT 57.889 33.333 0.00 0.00 0.00 1.28
1314 1392 3.507233 AGTCATTTCGTTTGGCATGACAT 59.493 39.130 0.00 0.00 45.40 3.06
1318 1396 5.182950 TCATTTCGTTTGGCATGACATAAGT 59.817 36.000 0.00 0.00 0.00 2.24
1466 1544 6.214399 CCTTACAGAATATACCAACCTCGAC 58.786 44.000 0.00 0.00 0.00 4.20
1531 1625 5.406175 TGACGGTAAACATTTGTAGTAGCAC 59.594 40.000 0.00 0.00 0.00 4.40
1592 1686 6.127168 ACGTTCTGGACCAACATTCATAGATA 60.127 38.462 0.00 0.00 0.00 1.98
1828 1926 6.613233 ACGTTTTTCATGACAAGTTGTGTTA 58.387 32.000 14.57 0.00 41.96 2.41
1868 1966 7.392673 AGTTTAGTTGATGAGCATGACAAATCT 59.607 33.333 0.00 0.00 0.00 2.40
1875 1973 3.189910 TGAGCATGACAAATCTGCTTCAC 59.810 43.478 0.00 0.00 45.79 3.18
1947 2045 5.048782 TCCTCGCATCAATATTAATTGCCAC 60.049 40.000 0.00 0.00 41.96 5.01
1952 2051 7.547019 TCGCATCAATATTAATTGCCACAAAAA 59.453 29.630 0.00 0.00 41.96 1.94
1984 2083 8.752005 ATTTAGCATATGTCTAAAGCCTTTCA 57.248 30.769 23.91 9.98 38.80 2.69
2011 2110 9.237846 GAAACTGAAACTACTGATTTCCAAAAG 57.762 33.333 0.00 0.00 35.57 2.27
2021 2120 9.918630 CTACTGATTTCCAAAAGTGATGAAAAT 57.081 29.630 0.00 0.00 31.20 1.82
2055 2156 9.891828 CAAGTAAATGCTGAATTTAGTGTACAA 57.108 29.630 8.84 0.00 41.54 2.41
2057 2158 9.502091 AGTAAATGCTGAATTTAGTGTACAAGA 57.498 29.630 7.52 0.00 41.08 3.02
2060 2161 8.798859 AATGCTGAATTTAGTGTACAAGATCT 57.201 30.769 0.00 0.00 0.00 2.75
2061 2162 8.798859 ATGCTGAATTTAGTGTACAAGATCTT 57.201 30.769 0.88 0.88 0.00 2.40
2062 2163 9.890629 ATGCTGAATTTAGTGTACAAGATCTTA 57.109 29.630 7.86 0.00 0.00 2.10
2063 2164 9.371136 TGCTGAATTTAGTGTACAAGATCTTAG 57.629 33.333 7.86 5.56 0.00 2.18
2073 2174 6.752815 GTGTACAAGATCTTAGCCTACAAGAC 59.247 42.308 7.86 0.00 34.96 3.01
2124 2225 5.511202 CCCAAAAAGGAAAGAATTGCAGCTA 60.511 40.000 0.00 0.00 41.22 3.32
2125 2226 5.636543 CCAAAAAGGAAAGAATTGCAGCTAG 59.363 40.000 0.00 0.00 41.22 3.42
2126 2227 4.446994 AAAGGAAAGAATTGCAGCTAGC 57.553 40.909 6.62 6.62 45.96 3.42
2137 2238 3.947173 AGCTAGCGCTGGATGTCT 58.053 55.556 26.32 8.97 46.86 3.41
2152 2258 6.593382 GCTGGATGTCTAGGATTAATCACATC 59.407 42.308 24.82 24.82 36.52 3.06
2154 2260 7.674120 TGGATGTCTAGGATTAATCACATCAG 58.326 38.462 29.28 15.92 37.82 2.90
2158 2264 7.674120 TGTCTAGGATTAATCACATCAGGATG 58.326 38.462 17.07 7.70 44.15 3.51
2236 2342 1.398390 CTCTGTACAAAGGCGGCATTC 59.602 52.381 13.08 0.00 0.00 2.67
2429 2541 2.361438 CCCTCTCAGGTACGTACAATCC 59.639 54.545 26.02 9.83 31.93 3.01
2431 2543 3.700038 CCTCTCAGGTACGTACAATCCTT 59.300 47.826 26.02 2.64 0.00 3.36
2925 3178 0.877649 CGGCGGAGATCCTGAACATG 60.878 60.000 0.00 0.00 0.00 3.21
3351 3604 0.108992 TCATGAACGAGTACGGCACC 60.109 55.000 0.00 0.00 44.46 5.01
3564 3817 2.328639 GAGATCGACGTCTCGCCC 59.671 66.667 14.70 0.00 39.96 6.13
3717 3970 0.834612 ACAACTTCACGAACCTCCCA 59.165 50.000 0.00 0.00 0.00 4.37
3718 3971 1.210967 ACAACTTCACGAACCTCCCAA 59.789 47.619 0.00 0.00 0.00 4.12
3813 4066 1.004440 GGCTGAGCTGAACCTCGTT 60.004 57.895 3.72 0.00 34.56 3.85
3827 4080 3.411808 TCGTTCATGGCGAGTACAC 57.588 52.632 8.75 0.00 34.11 2.90
3999 4254 9.273137 TCTTTAGAAGAATTGTTAGAGGGAGAT 57.727 33.333 0.00 0.00 33.83 2.75
4037 4292 2.224161 GCAGCCCGTCTCTGATAAGATT 60.224 50.000 0.00 0.00 33.54 2.40
4040 4295 4.272018 CAGCCCGTCTCTGATAAGATTTTG 59.728 45.833 0.00 0.00 33.54 2.44
4041 4296 4.080863 AGCCCGTCTCTGATAAGATTTTGT 60.081 41.667 0.00 0.00 0.00 2.83
4042 4297 4.034510 GCCCGTCTCTGATAAGATTTTGTG 59.965 45.833 0.00 0.00 0.00 3.33
4043 4298 5.178797 CCCGTCTCTGATAAGATTTTGTGT 58.821 41.667 0.00 0.00 0.00 3.72
4045 4300 6.183360 CCCGTCTCTGATAAGATTTTGTGTTC 60.183 42.308 0.00 0.00 0.00 3.18
4047 4302 7.118390 CCGTCTCTGATAAGATTTTGTGTTCTT 59.882 37.037 0.00 0.00 36.26 2.52
4048 4303 9.140286 CGTCTCTGATAAGATTTTGTGTTCTTA 57.860 33.333 0.00 0.00 38.45 2.10
4055 4310 5.904362 AGATTTTGTGTTCTTATCCTGCC 57.096 39.130 0.00 0.00 0.00 4.85
4068 4323 0.905357 TCCTGCCTCTTCTTGCTACC 59.095 55.000 0.00 0.00 0.00 3.18
4085 4347 2.031516 CCCTCAGCACGTCAAGCAG 61.032 63.158 0.00 0.00 0.00 4.24
4092 4354 0.848305 GCACGTCAAGCAGCAAAAAG 59.152 50.000 0.00 0.00 0.00 2.27
4106 4368 3.742369 AGCAAAAAGGCAATGAATTGTCG 59.258 39.130 5.02 0.00 46.44 4.35
4107 4369 3.494251 GCAAAAAGGCAATGAATTGTCGT 59.506 39.130 5.02 0.00 46.44 4.34
4108 4370 4.376311 GCAAAAAGGCAATGAATTGTCGTC 60.376 41.667 5.02 0.00 46.44 4.20
4109 4371 2.900122 AAGGCAATGAATTGTCGTCG 57.100 45.000 5.02 0.00 46.44 5.12
4110 4372 2.093306 AGGCAATGAATTGTCGTCGA 57.907 45.000 5.02 0.00 46.44 4.20
4128 4390 4.432503 CGTCGAACCGAGTTTTAGACAATG 60.433 45.833 0.00 0.00 36.23 2.82
4129 4391 4.446719 GTCGAACCGAGTTTTAGACAATGT 59.553 41.667 0.00 0.00 36.23 2.71
4130 4392 4.682860 TCGAACCGAGTTTTAGACAATGTC 59.317 41.667 5.02 5.02 0.00 3.06
4131 4393 4.432503 CGAACCGAGTTTTAGACAATGTCG 60.433 45.833 7.83 0.00 37.67 4.35
4132 4394 3.986277 ACCGAGTTTTAGACAATGTCGT 58.014 40.909 7.83 0.00 37.67 4.34
4133 4395 5.125100 ACCGAGTTTTAGACAATGTCGTA 57.875 39.130 7.83 0.00 37.67 3.43
4134 4396 5.717119 ACCGAGTTTTAGACAATGTCGTAT 58.283 37.500 7.83 0.00 37.67 3.06
4135 4397 5.803967 ACCGAGTTTTAGACAATGTCGTATC 59.196 40.000 7.83 1.66 37.67 2.24
4137 4399 6.034591 CGAGTTTTAGACAATGTCGTATCCT 58.965 40.000 7.83 2.96 37.67 3.24
4138 4400 6.020599 CGAGTTTTAGACAATGTCGTATCCTG 60.021 42.308 7.83 0.00 37.67 3.86
4139 4401 6.698380 AGTTTTAGACAATGTCGTATCCTGT 58.302 36.000 7.83 0.00 37.67 4.00
4140 4402 6.590292 AGTTTTAGACAATGTCGTATCCTGTG 59.410 38.462 7.83 0.00 37.67 3.66
4141 4403 3.526931 AGACAATGTCGTATCCTGTGG 57.473 47.619 7.83 0.00 37.67 4.17
4142 4404 1.933853 GACAATGTCGTATCCTGTGGC 59.066 52.381 0.00 0.00 0.00 5.01
4147 4413 0.464036 GTCGTATCCTGTGGCCATGA 59.536 55.000 9.72 6.91 0.00 3.07
4159 4425 2.358898 GTGGCCATGAATATTGAAGCGT 59.641 45.455 9.72 0.00 0.00 5.07
4165 4431 5.761003 CCATGAATATTGAAGCGTTGCATA 58.239 37.500 0.00 0.00 0.00 3.14
4179 4445 9.113876 GAAGCGTTGCATATATACATAAAAACC 57.886 33.333 0.00 0.00 0.00 3.27
4180 4446 8.391075 AGCGTTGCATATATACATAAAAACCT 57.609 30.769 0.00 0.00 0.00 3.50
4181 4447 9.496873 AGCGTTGCATATATACATAAAAACCTA 57.503 29.630 0.00 0.00 0.00 3.08
4182 4448 9.537848 GCGTTGCATATATACATAAAAACCTAC 57.462 33.333 0.00 0.00 0.00 3.18
4226 4492 6.679327 AAAATCGTTTACTTAGGGCATCTC 57.321 37.500 0.00 0.00 0.00 2.75
4227 4493 3.814005 TCGTTTACTTAGGGCATCTCC 57.186 47.619 0.00 0.00 0.00 3.71
4228 4494 3.101437 TCGTTTACTTAGGGCATCTCCA 58.899 45.455 0.00 0.00 36.21 3.86
4229 4495 3.516300 TCGTTTACTTAGGGCATCTCCAA 59.484 43.478 0.00 0.00 36.21 3.53
4230 4496 3.621715 CGTTTACTTAGGGCATCTCCAAC 59.378 47.826 0.00 0.00 36.21 3.77
4231 4497 3.536956 TTACTTAGGGCATCTCCAACG 57.463 47.619 0.00 0.00 36.21 4.10
4232 4498 0.107654 ACTTAGGGCATCTCCAACGC 60.108 55.000 0.00 0.00 36.21 4.84
4233 4499 0.815615 CTTAGGGCATCTCCAACGCC 60.816 60.000 0.00 0.00 45.47 5.68
4236 4502 2.203070 GGCATCTCCAACGCCGAT 60.203 61.111 0.00 0.00 35.79 4.18
4237 4503 2.247437 GGCATCTCCAACGCCGATC 61.247 63.158 0.00 0.00 35.79 3.69
4238 4504 1.227380 GCATCTCCAACGCCGATCT 60.227 57.895 0.00 0.00 0.00 2.75
4239 4505 0.811616 GCATCTCCAACGCCGATCTT 60.812 55.000 0.00 0.00 0.00 2.40
4240 4506 1.212616 CATCTCCAACGCCGATCTTC 58.787 55.000 0.00 0.00 0.00 2.87
4241 4507 0.824109 ATCTCCAACGCCGATCTTCA 59.176 50.000 0.00 0.00 0.00 3.02
4242 4508 0.606096 TCTCCAACGCCGATCTTCAA 59.394 50.000 0.00 0.00 0.00 2.69
4243 4509 1.001520 TCTCCAACGCCGATCTTCAAA 59.998 47.619 0.00 0.00 0.00 2.69
4244 4510 1.128692 CTCCAACGCCGATCTTCAAAC 59.871 52.381 0.00 0.00 0.00 2.93
4245 4511 0.168128 CCAACGCCGATCTTCAAACC 59.832 55.000 0.00 0.00 0.00 3.27
4246 4512 0.871722 CAACGCCGATCTTCAAACCA 59.128 50.000 0.00 0.00 0.00 3.67
4247 4513 0.872388 AACGCCGATCTTCAAACCAC 59.128 50.000 0.00 0.00 0.00 4.16
4248 4514 0.250124 ACGCCGATCTTCAAACCACA 60.250 50.000 0.00 0.00 0.00 4.17
4249 4515 0.165944 CGCCGATCTTCAAACCACAC 59.834 55.000 0.00 0.00 0.00 3.82
4250 4516 0.165944 GCCGATCTTCAAACCACACG 59.834 55.000 0.00 0.00 0.00 4.49
4251 4517 0.165944 CCGATCTTCAAACCACACGC 59.834 55.000 0.00 0.00 0.00 5.34
4252 4518 0.865111 CGATCTTCAAACCACACGCA 59.135 50.000 0.00 0.00 0.00 5.24
4253 4519 1.464608 CGATCTTCAAACCACACGCAT 59.535 47.619 0.00 0.00 0.00 4.73
4254 4520 2.670905 CGATCTTCAAACCACACGCATA 59.329 45.455 0.00 0.00 0.00 3.14
4255 4521 3.483574 CGATCTTCAAACCACACGCATAC 60.484 47.826 0.00 0.00 0.00 2.39
4256 4522 2.839975 TCTTCAAACCACACGCATACA 58.160 42.857 0.00 0.00 0.00 2.29
4257 4523 3.407698 TCTTCAAACCACACGCATACAT 58.592 40.909 0.00 0.00 0.00 2.29
4258 4524 3.435327 TCTTCAAACCACACGCATACATC 59.565 43.478 0.00 0.00 0.00 3.06
4259 4525 2.080693 TCAAACCACACGCATACATCC 58.919 47.619 0.00 0.00 0.00 3.51
4260 4526 1.083489 AAACCACACGCATACATCCG 58.917 50.000 0.00 0.00 0.00 4.18
4261 4527 0.742990 AACCACACGCATACATCCGG 60.743 55.000 0.00 0.00 0.00 5.14
4262 4528 1.142965 CCACACGCATACATCCGGA 59.857 57.895 6.61 6.61 0.00 5.14
4263 4529 1.151777 CCACACGCATACATCCGGAC 61.152 60.000 6.12 0.00 0.00 4.79
4264 4530 1.143183 ACACGCATACATCCGGACC 59.857 57.895 6.12 0.00 0.00 4.46
4265 4531 1.327690 ACACGCATACATCCGGACCT 61.328 55.000 6.12 0.00 0.00 3.85
4266 4532 0.597637 CACGCATACATCCGGACCTC 60.598 60.000 6.12 0.00 0.00 3.85
4267 4533 1.371758 CGCATACATCCGGACCTCG 60.372 63.158 6.12 0.69 38.88 4.63
4268 4534 1.664965 GCATACATCCGGACCTCGC 60.665 63.158 6.12 2.04 37.59 5.03
4269 4535 1.371758 CATACATCCGGACCTCGCG 60.372 63.158 6.12 0.00 37.59 5.87
4270 4536 2.561956 ATACATCCGGACCTCGCGG 61.562 63.158 6.12 0.00 37.59 6.46
4272 4538 4.143333 CATCCGGACCTCGCGGTT 62.143 66.667 6.12 0.00 45.73 4.44
4273 4539 3.387947 ATCCGGACCTCGCGGTTT 61.388 61.111 6.12 0.00 45.73 3.27
4274 4540 3.659089 ATCCGGACCTCGCGGTTTG 62.659 63.158 6.12 0.00 45.73 2.93
4275 4541 4.367023 CCGGACCTCGCGGTTTGA 62.367 66.667 6.13 0.00 45.73 2.69
4276 4542 2.356553 CGGACCTCGCGGTTTGAA 60.357 61.111 6.13 0.00 45.73 2.69
4277 4543 1.740296 CGGACCTCGCGGTTTGAAT 60.740 57.895 6.13 0.00 45.73 2.57
4278 4544 1.693083 CGGACCTCGCGGTTTGAATC 61.693 60.000 6.13 0.00 45.73 2.52
4279 4545 1.366854 GGACCTCGCGGTTTGAATCC 61.367 60.000 6.13 0.28 45.73 3.01
4280 4546 1.366854 GACCTCGCGGTTTGAATCCC 61.367 60.000 6.13 0.00 45.73 3.85
4281 4547 2.461110 CCTCGCGGTTTGAATCCCG 61.461 63.158 6.13 0.00 46.90 5.14
4282 4548 2.435234 TCGCGGTTTGAATCCCGG 60.435 61.111 6.13 0.00 44.36 5.73
4283 4549 2.435234 CGCGGTTTGAATCCCGGA 60.435 61.111 0.73 0.00 44.36 5.14
4284 4550 1.817941 CGCGGTTTGAATCCCGGAT 60.818 57.895 0.73 0.00 44.36 4.18
4285 4551 1.727467 GCGGTTTGAATCCCGGATG 59.273 57.895 0.73 0.00 44.36 3.51
4286 4552 1.029947 GCGGTTTGAATCCCGGATGT 61.030 55.000 0.73 0.00 44.36 3.06
4287 4553 1.014352 CGGTTTGAATCCCGGATGTC 58.986 55.000 0.73 2.08 40.54 3.06
4288 4554 1.677518 CGGTTTGAATCCCGGATGTCA 60.678 52.381 0.73 4.64 40.54 3.58
4289 4555 2.654863 GGTTTGAATCCCGGATGTCAT 58.345 47.619 0.73 0.00 0.00 3.06
4290 4556 2.618709 GGTTTGAATCCCGGATGTCATC 59.381 50.000 0.73 4.06 0.00 2.92
4291 4557 2.618709 GTTTGAATCCCGGATGTCATCC 59.381 50.000 20.45 20.45 46.22 3.51
4299 4565 3.409856 GATGTCATCCAACGCGGG 58.590 61.111 12.47 2.26 34.36 6.13
4300 4566 2.823829 GATGTCATCCAACGCGGGC 61.824 63.158 12.47 0.00 34.36 6.13
4302 4568 4.778143 GTCATCCAACGCGGGCCT 62.778 66.667 12.47 0.00 34.36 5.19
4303 4569 4.776322 TCATCCAACGCGGGCCTG 62.776 66.667 12.47 7.41 34.36 4.85
4305 4571 3.395702 ATCCAACGCGGGCCTGTA 61.396 61.111 14.55 0.00 34.36 2.74
4306 4572 3.675619 ATCCAACGCGGGCCTGTAC 62.676 63.158 14.55 0.00 34.36 2.90
4307 4573 4.690719 CCAACGCGGGCCTGTACA 62.691 66.667 14.55 0.00 0.00 2.90
4308 4574 2.666862 CAACGCGGGCCTGTACAA 60.667 61.111 14.55 0.00 0.00 2.41
4309 4575 2.667199 AACGCGGGCCTGTACAAC 60.667 61.111 14.55 0.00 0.00 3.32
4310 4576 4.692475 ACGCGGGCCTGTACAACC 62.692 66.667 14.55 6.10 0.00 3.77
4315 4581 4.382320 GGCCTGTACAACCGCCGA 62.382 66.667 11.35 0.00 0.00 5.54
4316 4582 3.116531 GCCTGTACAACCGCCGAC 61.117 66.667 0.00 0.00 0.00 4.79
4317 4583 2.433664 CCTGTACAACCGCCGACC 60.434 66.667 0.00 0.00 0.00 4.79
4318 4584 2.340809 CTGTACAACCGCCGACCA 59.659 61.111 0.00 0.00 0.00 4.02
4319 4585 1.736645 CTGTACAACCGCCGACCAG 60.737 63.158 0.00 0.00 0.00 4.00
4320 4586 2.341176 GTACAACCGCCGACCAGT 59.659 61.111 0.00 0.00 0.00 4.00
4321 4587 1.735559 GTACAACCGCCGACCAGTC 60.736 63.158 0.00 0.00 0.00 3.51
4322 4588 2.934570 TACAACCGCCGACCAGTCC 61.935 63.158 0.00 0.00 0.00 3.85
4327 4593 4.351938 CGCCGACCAGTCCGAACA 62.352 66.667 0.00 0.00 0.00 3.18
4328 4594 2.029964 GCCGACCAGTCCGAACAA 59.970 61.111 0.00 0.00 0.00 2.83
4665 4931 3.472263 GCACTTTTGTAGTTGCCCG 57.528 52.632 0.00 0.00 33.85 6.13
4666 4932 0.663269 GCACTTTTGTAGTTGCCCGC 60.663 55.000 0.00 0.00 33.85 6.13
4667 4933 0.665835 CACTTTTGTAGTTGCCCGCA 59.334 50.000 0.00 0.00 33.85 5.69
4668 4934 0.666374 ACTTTTGTAGTTGCCCGCAC 59.334 50.000 0.00 0.00 31.29 5.34
4669 4935 0.951558 CTTTTGTAGTTGCCCGCACT 59.048 50.000 0.00 0.00 0.00 4.40
4670 4936 0.665835 TTTTGTAGTTGCCCGCACTG 59.334 50.000 0.00 0.00 0.00 3.66
4671 4937 0.464735 TTTGTAGTTGCCCGCACTGT 60.465 50.000 0.00 0.00 0.00 3.55
4672 4938 0.464735 TTGTAGTTGCCCGCACTGTT 60.465 50.000 0.00 0.00 0.00 3.16
4673 4939 0.464735 TGTAGTTGCCCGCACTGTTT 60.465 50.000 0.00 0.00 0.00 2.83
4674 4940 0.237498 GTAGTTGCCCGCACTGTTTC 59.763 55.000 0.00 0.00 0.00 2.78
4675 4941 0.887387 TAGTTGCCCGCACTGTTTCC 60.887 55.000 0.00 0.00 0.00 3.13
4676 4942 3.283684 TTGCCCGCACTGTTTCCG 61.284 61.111 0.00 0.00 0.00 4.30
4679 4945 3.726517 CCCGCACTGTTTCCGCAG 61.727 66.667 0.00 0.00 41.92 5.18
4680 4946 4.389576 CCGCACTGTTTCCGCAGC 62.390 66.667 0.00 0.00 39.96 5.25
4681 4947 3.648982 CGCACTGTTTCCGCAGCA 61.649 61.111 0.00 0.00 39.96 4.41
4682 4948 2.721231 GCACTGTTTCCGCAGCAA 59.279 55.556 0.00 0.00 39.96 3.91
4683 4949 1.065600 GCACTGTTTCCGCAGCAAA 59.934 52.632 0.00 0.00 39.96 3.68
4684 4950 0.527385 GCACTGTTTCCGCAGCAAAA 60.527 50.000 0.00 0.00 39.96 2.44
4685 4951 1.869342 GCACTGTTTCCGCAGCAAAAT 60.869 47.619 0.00 0.00 39.96 1.82
4686 4952 2.053627 CACTGTTTCCGCAGCAAAATC 58.946 47.619 0.00 0.00 39.96 2.17
4687 4953 1.000274 ACTGTTTCCGCAGCAAAATCC 60.000 47.619 0.00 0.00 39.96 3.01
4688 4954 0.316841 TGTTTCCGCAGCAAAATCCC 59.683 50.000 0.00 0.00 0.00 3.85
4689 4955 0.389817 GTTTCCGCAGCAAAATCCCC 60.390 55.000 0.00 0.00 0.00 4.81
4690 4956 1.872197 TTTCCGCAGCAAAATCCCCG 61.872 55.000 0.00 0.00 0.00 5.73
4691 4957 4.496927 CCGCAGCAAAATCCCCGC 62.497 66.667 0.00 0.00 0.00 6.13
4692 4958 3.443045 CGCAGCAAAATCCCCGCT 61.443 61.111 0.00 0.00 36.10 5.52
4693 4959 2.491621 GCAGCAAAATCCCCGCTC 59.508 61.111 0.00 0.00 32.48 5.03
4694 4960 2.048603 GCAGCAAAATCCCCGCTCT 61.049 57.895 0.00 0.00 32.48 4.09
4695 4961 0.748005 GCAGCAAAATCCCCGCTCTA 60.748 55.000 0.00 0.00 32.48 2.43
4696 4962 1.972872 CAGCAAAATCCCCGCTCTAT 58.027 50.000 0.00 0.00 32.48 1.98
4697 4963 2.301346 CAGCAAAATCCCCGCTCTATT 58.699 47.619 0.00 0.00 32.48 1.73
4698 4964 2.291741 CAGCAAAATCCCCGCTCTATTC 59.708 50.000 0.00 0.00 32.48 1.75
4699 4965 2.173569 AGCAAAATCCCCGCTCTATTCT 59.826 45.455 0.00 0.00 0.00 2.40
4700 4966 2.952310 GCAAAATCCCCGCTCTATTCTT 59.048 45.455 0.00 0.00 0.00 2.52
4701 4967 3.003793 GCAAAATCCCCGCTCTATTCTTC 59.996 47.826 0.00 0.00 0.00 2.87
4702 4968 3.493767 AAATCCCCGCTCTATTCTTCC 57.506 47.619 0.00 0.00 0.00 3.46
4703 4969 2.103153 ATCCCCGCTCTATTCTTCCA 57.897 50.000 0.00 0.00 0.00 3.53
4704 4970 2.103153 TCCCCGCTCTATTCTTCCAT 57.897 50.000 0.00 0.00 0.00 3.41
4705 4971 1.971357 TCCCCGCTCTATTCTTCCATC 59.029 52.381 0.00 0.00 0.00 3.51
4706 4972 1.337260 CCCCGCTCTATTCTTCCATCG 60.337 57.143 0.00 0.00 0.00 3.84
4707 4973 1.423395 CCGCTCTATTCTTCCATCGC 58.577 55.000 0.00 0.00 0.00 4.58
4708 4974 1.056103 CGCTCTATTCTTCCATCGCG 58.944 55.000 0.00 0.00 0.00 5.87
4709 4975 0.787183 GCTCTATTCTTCCATCGCGC 59.213 55.000 0.00 0.00 0.00 6.86
4710 4976 1.423395 CTCTATTCTTCCATCGCGCC 58.577 55.000 0.00 0.00 0.00 6.53
4711 4977 0.318699 TCTATTCTTCCATCGCGCCG 60.319 55.000 0.00 0.00 0.00 6.46
4712 4978 1.891060 CTATTCTTCCATCGCGCCGC 61.891 60.000 0.00 0.00 0.00 6.53
4713 4979 2.363711 TATTCTTCCATCGCGCCGCT 62.364 55.000 7.78 0.00 0.00 5.52
4714 4980 4.873129 TCTTCCATCGCGCCGCTC 62.873 66.667 7.78 0.00 0.00 5.03
4715 4981 4.880537 CTTCCATCGCGCCGCTCT 62.881 66.667 7.78 0.00 0.00 4.09
4716 4982 4.873129 TTCCATCGCGCCGCTCTC 62.873 66.667 7.78 0.00 0.00 3.20
4719 4985 4.957684 CATCGCGCCGCTCTCCAT 62.958 66.667 7.78 0.00 0.00 3.41
4720 4986 4.654412 ATCGCGCCGCTCTCCATC 62.654 66.667 7.78 0.00 0.00 3.51
4723 4989 4.838152 GCGCCGCTCTCCATCCAA 62.838 66.667 0.00 0.00 0.00 3.53
4724 4990 2.109799 CGCCGCTCTCCATCCAAT 59.890 61.111 0.00 0.00 0.00 3.16
4725 4991 1.524621 CGCCGCTCTCCATCCAATT 60.525 57.895 0.00 0.00 0.00 2.32
4726 4992 1.502163 CGCCGCTCTCCATCCAATTC 61.502 60.000 0.00 0.00 0.00 2.17
4727 4993 1.169034 GCCGCTCTCCATCCAATTCC 61.169 60.000 0.00 0.00 0.00 3.01
4728 4994 0.536006 CCGCTCTCCATCCAATTCCC 60.536 60.000 0.00 0.00 0.00 3.97
4729 4995 0.882042 CGCTCTCCATCCAATTCCCG 60.882 60.000 0.00 0.00 0.00 5.14
4730 4996 0.181350 GCTCTCCATCCAATTCCCGT 59.819 55.000 0.00 0.00 0.00 5.28
4731 4997 1.811941 GCTCTCCATCCAATTCCCGTC 60.812 57.143 0.00 0.00 0.00 4.79
4732 4998 0.837272 TCTCCATCCAATTCCCGTCC 59.163 55.000 0.00 0.00 0.00 4.79
4733 4999 0.839946 CTCCATCCAATTCCCGTCCT 59.160 55.000 0.00 0.00 0.00 3.85
4734 5000 1.212935 CTCCATCCAATTCCCGTCCTT 59.787 52.381 0.00 0.00 0.00 3.36
4735 5001 1.211949 TCCATCCAATTCCCGTCCTTC 59.788 52.381 0.00 0.00 0.00 3.46
4736 5002 1.212935 CCATCCAATTCCCGTCCTTCT 59.787 52.381 0.00 0.00 0.00 2.85
4737 5003 2.565841 CATCCAATTCCCGTCCTTCTC 58.434 52.381 0.00 0.00 0.00 2.87
4738 5004 1.952621 TCCAATTCCCGTCCTTCTCT 58.047 50.000 0.00 0.00 0.00 3.10
4739 5005 1.831736 TCCAATTCCCGTCCTTCTCTC 59.168 52.381 0.00 0.00 0.00 3.20
4740 5006 1.134371 CCAATTCCCGTCCTTCTCTCC 60.134 57.143 0.00 0.00 0.00 3.71
4741 5007 1.134371 CAATTCCCGTCCTTCTCTCCC 60.134 57.143 0.00 0.00 0.00 4.30
4742 5008 0.042731 ATTCCCGTCCTTCTCTCCCA 59.957 55.000 0.00 0.00 0.00 4.37
4743 5009 0.903454 TTCCCGTCCTTCTCTCCCAC 60.903 60.000 0.00 0.00 0.00 4.61
4744 5010 1.305381 CCCGTCCTTCTCTCCCACT 60.305 63.158 0.00 0.00 0.00 4.00
4745 5011 1.324005 CCCGTCCTTCTCTCCCACTC 61.324 65.000 0.00 0.00 0.00 3.51
4746 5012 0.323908 CCGTCCTTCTCTCCCACTCT 60.324 60.000 0.00 0.00 0.00 3.24
4747 5013 1.099689 CGTCCTTCTCTCCCACTCTC 58.900 60.000 0.00 0.00 0.00 3.20
4748 5014 1.340600 CGTCCTTCTCTCCCACTCTCT 60.341 57.143 0.00 0.00 0.00 3.10
4749 5015 2.815158 GTCCTTCTCTCCCACTCTCTT 58.185 52.381 0.00 0.00 0.00 2.85
4750 5016 2.758423 GTCCTTCTCTCCCACTCTCTTC 59.242 54.545 0.00 0.00 0.00 2.87
4751 5017 2.652348 TCCTTCTCTCCCACTCTCTTCT 59.348 50.000 0.00 0.00 0.00 2.85
4752 5018 3.076785 TCCTTCTCTCCCACTCTCTTCTT 59.923 47.826 0.00 0.00 0.00 2.52
4753 5019 3.447229 CCTTCTCTCCCACTCTCTTCTTC 59.553 52.174 0.00 0.00 0.00 2.87
4754 5020 3.094484 TCTCTCCCACTCTCTTCTTCC 57.906 52.381 0.00 0.00 0.00 3.46
4755 5021 2.107366 CTCTCCCACTCTCTTCTTCCC 58.893 57.143 0.00 0.00 0.00 3.97
4756 5022 1.719378 TCTCCCACTCTCTTCTTCCCT 59.281 52.381 0.00 0.00 0.00 4.20
4757 5023 2.107366 CTCCCACTCTCTTCTTCCCTC 58.893 57.143 0.00 0.00 0.00 4.30
4758 5024 1.199615 CCCACTCTCTTCTTCCCTCC 58.800 60.000 0.00 0.00 0.00 4.30
4759 5025 1.199615 CCACTCTCTTCTTCCCTCCC 58.800 60.000 0.00 0.00 0.00 4.30
4760 5026 0.820871 CACTCTCTTCTTCCCTCCCG 59.179 60.000 0.00 0.00 0.00 5.14
4761 5027 0.973496 ACTCTCTTCTTCCCTCCCGC 60.973 60.000 0.00 0.00 0.00 6.13
4762 5028 0.686112 CTCTCTTCTTCCCTCCCGCT 60.686 60.000 0.00 0.00 0.00 5.52
4763 5029 0.972983 TCTCTTCTTCCCTCCCGCTG 60.973 60.000 0.00 0.00 0.00 5.18
4764 5030 2.124942 CTTCTTCCCTCCCGCTGC 60.125 66.667 0.00 0.00 0.00 5.25
4765 5031 3.689002 CTTCTTCCCTCCCGCTGCC 62.689 68.421 0.00 0.00 0.00 4.85
4781 5047 4.351938 CCGACGCGTGGAACCAGA 62.352 66.667 23.51 0.00 0.00 3.86
4782 5048 3.103911 CGACGCGTGGAACCAGAC 61.104 66.667 20.70 0.00 0.00 3.51
4783 5049 3.103911 GACGCGTGGAACCAGACG 61.104 66.667 20.70 11.98 38.63 4.18
4784 5050 3.547249 GACGCGTGGAACCAGACGA 62.547 63.158 20.70 0.00 37.81 4.20
4785 5051 2.126071 CGCGTGGAACCAGACGAT 60.126 61.111 0.00 0.00 37.81 3.73
4786 5052 1.138036 CGCGTGGAACCAGACGATA 59.862 57.895 0.00 0.00 37.81 2.92
4787 5053 0.866061 CGCGTGGAACCAGACGATAG 60.866 60.000 0.00 0.00 37.81 2.08
4788 5054 1.146358 GCGTGGAACCAGACGATAGC 61.146 60.000 7.80 0.00 37.81 2.97
4789 5055 0.172578 CGTGGAACCAGACGATAGCA 59.827 55.000 0.00 0.00 37.81 3.49
4790 5056 1.202417 CGTGGAACCAGACGATAGCAT 60.202 52.381 0.00 0.00 37.81 3.79
4791 5057 2.205074 GTGGAACCAGACGATAGCATG 58.795 52.381 0.00 0.00 42.67 4.06
4792 5058 1.221414 GGAACCAGACGATAGCATGC 58.779 55.000 10.51 10.51 42.67 4.06
4793 5059 1.221414 GAACCAGACGATAGCATGCC 58.779 55.000 15.66 0.00 42.67 4.40
4794 5060 0.541392 AACCAGACGATAGCATGCCA 59.459 50.000 15.66 0.00 42.67 4.92
4795 5061 0.105593 ACCAGACGATAGCATGCCAG 59.894 55.000 15.66 5.90 42.67 4.85
4796 5062 0.390492 CCAGACGATAGCATGCCAGA 59.610 55.000 15.66 0.00 42.67 3.86
4797 5063 1.604947 CCAGACGATAGCATGCCAGAG 60.605 57.143 15.66 6.68 42.67 3.35
4798 5064 1.068281 CAGACGATAGCATGCCAGAGT 59.932 52.381 15.66 10.18 42.67 3.24
4799 5065 1.759445 AGACGATAGCATGCCAGAGTT 59.241 47.619 15.66 0.00 42.67 3.01
4800 5066 1.863454 GACGATAGCATGCCAGAGTTG 59.137 52.381 15.66 2.74 42.67 3.16
4801 5067 1.473965 ACGATAGCATGCCAGAGTTGG 60.474 52.381 15.66 0.00 44.41 3.77
4802 5068 3.801694 ACGATAGCATGCCAGAGTTGGA 61.802 50.000 15.66 0.00 44.37 3.53
4803 5069 5.607745 ACGATAGCATGCCAGAGTTGGAG 62.608 52.174 15.66 0.00 44.37 3.86
4810 5076 4.996976 CAGAGTTGGAGGTCGTGG 57.003 61.111 0.00 0.00 0.00 4.94
4811 5077 2.351777 CAGAGTTGGAGGTCGTGGA 58.648 57.895 0.00 0.00 0.00 4.02
4812 5078 0.244994 CAGAGTTGGAGGTCGTGGAG 59.755 60.000 0.00 0.00 0.00 3.86
4813 5079 0.900647 AGAGTTGGAGGTCGTGGAGG 60.901 60.000 0.00 0.00 0.00 4.30
4814 5080 1.152312 AGTTGGAGGTCGTGGAGGT 60.152 57.895 0.00 0.00 0.00 3.85
4815 5081 1.004918 GTTGGAGGTCGTGGAGGTG 60.005 63.158 0.00 0.00 0.00 4.00
4816 5082 2.879233 TTGGAGGTCGTGGAGGTGC 61.879 63.158 0.00 0.00 0.00 5.01
4817 5083 3.311110 GGAGGTCGTGGAGGTGCA 61.311 66.667 0.00 0.00 0.00 4.57
4818 5084 2.262915 GAGGTCGTGGAGGTGCAG 59.737 66.667 0.00 0.00 0.00 4.41
4819 5085 3.302347 GAGGTCGTGGAGGTGCAGG 62.302 68.421 0.00 0.00 0.00 4.85
4820 5086 3.311110 GGTCGTGGAGGTGCAGGA 61.311 66.667 0.00 0.00 0.00 3.86
4821 5087 2.262915 GTCGTGGAGGTGCAGGAG 59.737 66.667 0.00 0.00 0.00 3.69
4822 5088 2.997315 TCGTGGAGGTGCAGGAGG 60.997 66.667 0.00 0.00 0.00 4.30
4823 5089 2.997315 CGTGGAGGTGCAGGAGGA 60.997 66.667 0.00 0.00 0.00 3.71
4824 5090 2.583441 CGTGGAGGTGCAGGAGGAA 61.583 63.158 0.00 0.00 0.00 3.36
4825 5091 1.003233 GTGGAGGTGCAGGAGGAAC 60.003 63.158 0.00 0.00 0.00 3.62
4826 5092 2.224159 TGGAGGTGCAGGAGGAACC 61.224 63.158 0.00 0.00 39.35 3.62
4827 5093 2.671682 GAGGTGCAGGAGGAACCC 59.328 66.667 0.00 0.00 40.05 4.11
4828 5094 2.121963 AGGTGCAGGAGGAACCCA 60.122 61.111 0.00 0.00 40.05 4.51
4829 5095 1.774217 AGGTGCAGGAGGAACCCAA 60.774 57.895 0.00 0.00 40.05 4.12
4830 5096 1.603739 GGTGCAGGAGGAACCCAAC 60.604 63.158 0.00 0.00 40.05 3.77
4831 5097 1.150536 GTGCAGGAGGAACCCAACA 59.849 57.895 0.00 0.00 40.05 3.33
4832 5098 0.251341 GTGCAGGAGGAACCCAACAT 60.251 55.000 0.00 0.00 40.05 2.71
4833 5099 0.038166 TGCAGGAGGAACCCAACATC 59.962 55.000 0.00 0.00 40.05 3.06
4834 5100 0.038166 GCAGGAGGAACCCAACATCA 59.962 55.000 0.00 0.00 40.05 3.07
4835 5101 1.826385 CAGGAGGAACCCAACATCAC 58.174 55.000 0.00 0.00 40.05 3.06
4836 5102 0.698818 AGGAGGAACCCAACATCACC 59.301 55.000 0.00 0.00 40.05 4.02
4837 5103 0.323451 GGAGGAACCCAACATCACCC 60.323 60.000 0.00 0.00 0.00 4.61
4838 5104 0.698818 GAGGAACCCAACATCACCCT 59.301 55.000 0.00 0.00 0.00 4.34
4839 5105 1.075536 GAGGAACCCAACATCACCCTT 59.924 52.381 0.00 0.00 0.00 3.95
4840 5106 1.203050 AGGAACCCAACATCACCCTTG 60.203 52.381 0.00 0.00 0.00 3.61
4841 5107 0.603065 GAACCCAACATCACCCTTGC 59.397 55.000 0.00 0.00 0.00 4.01
4842 5108 0.831711 AACCCAACATCACCCTTGCC 60.832 55.000 0.00 0.00 0.00 4.52
4843 5109 1.984026 CCCAACATCACCCTTGCCC 60.984 63.158 0.00 0.00 0.00 5.36
4844 5110 2.342650 CCAACATCACCCTTGCCCG 61.343 63.158 0.00 0.00 0.00 6.13
4845 5111 2.035626 AACATCACCCTTGCCCGG 59.964 61.111 0.00 0.00 0.00 5.73
4846 5112 2.534396 AACATCACCCTTGCCCGGA 61.534 57.895 0.73 0.00 0.00 5.14
4847 5113 2.075355 AACATCACCCTTGCCCGGAA 62.075 55.000 0.73 0.00 0.00 4.30
4848 5114 1.750399 CATCACCCTTGCCCGGAAG 60.750 63.158 0.73 0.00 0.00 3.46
4849 5115 1.923395 ATCACCCTTGCCCGGAAGA 60.923 57.895 0.73 0.00 0.00 2.87
4850 5116 1.281925 ATCACCCTTGCCCGGAAGAT 61.282 55.000 0.73 0.00 0.00 2.40
4851 5117 1.452108 CACCCTTGCCCGGAAGATC 60.452 63.158 0.73 0.00 0.00 2.75
4852 5118 1.923395 ACCCTTGCCCGGAAGATCA 60.923 57.895 0.73 0.00 0.00 2.92
4853 5119 1.302949 CCCTTGCCCGGAAGATCAA 59.697 57.895 0.73 0.00 0.00 2.57
4854 5120 1.032114 CCCTTGCCCGGAAGATCAAC 61.032 60.000 0.73 0.00 0.00 3.18
4855 5121 0.035056 CCTTGCCCGGAAGATCAACT 60.035 55.000 0.73 0.00 0.00 3.16
4856 5122 1.614317 CCTTGCCCGGAAGATCAACTT 60.614 52.381 0.73 0.00 42.03 2.66
4857 5123 1.470098 CTTGCCCGGAAGATCAACTTG 59.530 52.381 0.73 0.00 39.13 3.16
4858 5124 0.322456 TGCCCGGAAGATCAACTTGG 60.322 55.000 0.73 0.00 39.13 3.61
4859 5125 1.657751 GCCCGGAAGATCAACTTGGC 61.658 60.000 0.73 0.00 39.13 4.52
4860 5126 1.369091 CCCGGAAGATCAACTTGGCG 61.369 60.000 0.73 0.00 39.13 5.69
4861 5127 0.391130 CCGGAAGATCAACTTGGCGA 60.391 55.000 0.00 0.00 39.13 5.54
4862 5128 1.656652 CGGAAGATCAACTTGGCGAT 58.343 50.000 0.00 0.00 39.13 4.58
4863 5129 1.328680 CGGAAGATCAACTTGGCGATG 59.671 52.381 0.00 0.00 39.13 3.84
4864 5130 1.064654 GGAAGATCAACTTGGCGATGC 59.935 52.381 0.00 0.00 39.13 3.91
4865 5131 1.739466 GAAGATCAACTTGGCGATGCA 59.261 47.619 0.00 0.00 39.13 3.96
4866 5132 1.376543 AGATCAACTTGGCGATGCAG 58.623 50.000 0.00 0.00 0.00 4.41
4867 5133 1.065926 AGATCAACTTGGCGATGCAGA 60.066 47.619 0.00 0.00 0.00 4.26
4868 5134 1.739466 GATCAACTTGGCGATGCAGAA 59.261 47.619 0.00 0.00 0.00 3.02
4869 5135 1.603456 TCAACTTGGCGATGCAGAAA 58.397 45.000 0.00 0.00 0.00 2.52
4870 5136 1.952990 TCAACTTGGCGATGCAGAAAA 59.047 42.857 0.00 0.00 0.00 2.29
4871 5137 2.360483 TCAACTTGGCGATGCAGAAAAA 59.640 40.909 0.00 0.00 0.00 1.94
4872 5138 3.005684 TCAACTTGGCGATGCAGAAAAAT 59.994 39.130 0.00 0.00 0.00 1.82
4873 5139 3.221964 ACTTGGCGATGCAGAAAAATC 57.778 42.857 0.00 0.00 0.00 2.17
4874 5140 2.179589 CTTGGCGATGCAGAAAAATCG 58.820 47.619 0.85 0.85 46.53 3.34
4877 5143 3.994729 CGATGCAGAAAAATCGCCA 57.005 47.368 0.00 0.00 39.22 5.69
4878 5144 2.261037 CGATGCAGAAAAATCGCCAA 57.739 45.000 0.00 0.00 39.22 4.52
4879 5145 2.179589 CGATGCAGAAAAATCGCCAAG 58.820 47.619 0.00 0.00 39.22 3.61
4880 5146 2.414559 CGATGCAGAAAAATCGCCAAGT 60.415 45.455 0.00 0.00 39.22 3.16
4881 5147 2.704725 TGCAGAAAAATCGCCAAGTC 57.295 45.000 0.00 0.00 0.00 3.01
4882 5148 1.952990 TGCAGAAAAATCGCCAAGTCA 59.047 42.857 0.00 0.00 0.00 3.41
4883 5149 2.360483 TGCAGAAAAATCGCCAAGTCAA 59.640 40.909 0.00 0.00 0.00 3.18
4884 5150 3.181482 TGCAGAAAAATCGCCAAGTCAAA 60.181 39.130 0.00 0.00 0.00 2.69
4885 5151 3.426525 GCAGAAAAATCGCCAAGTCAAAG 59.573 43.478 0.00 0.00 0.00 2.77
4886 5152 3.426525 CAGAAAAATCGCCAAGTCAAAGC 59.573 43.478 0.00 0.00 0.00 3.51
4892 5158 1.081175 GCCAAGTCAAAGCGAAGGC 60.081 57.895 0.00 0.00 40.37 4.35
4893 5159 1.581447 CCAAGTCAAAGCGAAGGCC 59.419 57.895 0.00 0.00 41.24 5.19
4894 5160 1.207593 CAAGTCAAAGCGAAGGCCG 59.792 57.895 0.00 0.00 41.24 6.13
4895 5161 1.966451 AAGTCAAAGCGAAGGCCGG 60.966 57.895 0.00 0.00 41.24 6.13
4896 5162 2.358247 GTCAAAGCGAAGGCCGGA 60.358 61.111 5.05 0.00 41.24 5.14
4897 5163 1.964373 GTCAAAGCGAAGGCCGGAA 60.964 57.895 5.05 0.00 41.24 4.30
4898 5164 1.228003 TCAAAGCGAAGGCCGGAAA 60.228 52.632 5.05 0.00 41.24 3.13
4899 5165 1.210155 CAAAGCGAAGGCCGGAAAG 59.790 57.895 5.05 0.00 41.24 2.62
4900 5166 1.971695 AAAGCGAAGGCCGGAAAGG 60.972 57.895 5.05 0.00 41.24 3.11
4901 5167 2.406002 AAAGCGAAGGCCGGAAAGGA 62.406 55.000 5.05 0.00 45.00 3.36
4902 5168 2.804828 AAGCGAAGGCCGGAAAGGAG 62.805 60.000 5.05 0.00 45.00 3.69
4903 5169 2.125106 CGAAGGCCGGAAAGGAGG 60.125 66.667 5.05 0.00 45.00 4.30
4904 5170 2.272471 GAAGGCCGGAAAGGAGGG 59.728 66.667 5.05 0.00 45.00 4.30
4905 5171 2.204090 AAGGCCGGAAAGGAGGGA 60.204 61.111 5.05 0.00 45.00 4.20
4906 5172 1.848886 GAAGGCCGGAAAGGAGGGAA 61.849 60.000 5.05 0.00 45.00 3.97
4907 5173 1.432023 AAGGCCGGAAAGGAGGGAAA 61.432 55.000 5.05 0.00 45.00 3.13
4908 5174 1.378646 GGCCGGAAAGGAGGGAAAG 60.379 63.158 5.05 0.00 45.00 2.62
4909 5175 2.046864 GCCGGAAAGGAGGGAAAGC 61.047 63.158 5.05 0.00 45.00 3.51
4910 5176 1.685820 CCGGAAAGGAGGGAAAGCT 59.314 57.895 0.00 0.00 45.00 3.74
4911 5177 0.393132 CCGGAAAGGAGGGAAAGCTC 60.393 60.000 0.00 0.00 45.00 4.09
4912 5178 0.324943 CGGAAAGGAGGGAAAGCTCA 59.675 55.000 0.00 0.00 0.00 4.26
4913 5179 1.677217 CGGAAAGGAGGGAAAGCTCAG 60.677 57.143 0.00 0.00 0.00 3.35
4914 5180 1.340502 GGAAAGGAGGGAAAGCTCAGG 60.341 57.143 0.00 0.00 0.00 3.86
4915 5181 1.630878 GAAAGGAGGGAAAGCTCAGGA 59.369 52.381 0.00 0.00 0.00 3.86
4916 5182 1.747444 AAGGAGGGAAAGCTCAGGAA 58.253 50.000 0.00 0.00 0.00 3.36
4917 5183 1.284313 AGGAGGGAAAGCTCAGGAAG 58.716 55.000 0.00 0.00 0.00 3.46
4925 5191 3.896479 GCTCAGGAAGCGGAAAGG 58.104 61.111 0.00 0.00 42.21 3.11
4926 5192 2.402572 GCTCAGGAAGCGGAAAGGC 61.403 63.158 0.00 0.00 42.21 4.35
4927 5193 1.746991 CTCAGGAAGCGGAAAGGCC 60.747 63.158 0.00 0.00 0.00 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 3.478857 TTCGGTAGCCAAAACTCTGAA 57.521 42.857 0.00 0.00 0.00 3.02
330 339 3.577667 CGAGAAATGTACGTACCAACCA 58.422 45.455 22.43 4.24 0.00 3.67
334 343 1.467883 CCGCGAGAAATGTACGTACCA 60.468 52.381 22.43 11.24 0.00 3.25
352 361 1.636340 CGCGTTTCTTGCTATCCCG 59.364 57.895 0.00 0.00 0.00 5.14
590 617 8.577164 AGGTAGTAGTATTGGGAATATTTGGT 57.423 34.615 0.00 0.00 0.00 3.67
794 831 2.223433 GGAGCAACAGCAGTGCATTATC 60.223 50.000 19.20 11.72 0.00 1.75
833 870 3.932089 GCTTCTCAGATCCTTGACTCAAC 59.068 47.826 0.00 0.00 0.00 3.18
940 981 5.827756 TCTACTGAACTGGAGAGATGGTTA 58.172 41.667 0.00 0.00 0.00 2.85
980 1023 1.731969 GCGACCACCAGTGTACGTC 60.732 63.158 0.00 5.92 32.80 4.34
981 1024 2.337532 GCGACCACCAGTGTACGT 59.662 61.111 12.68 0.00 32.80 3.57
982 1025 2.431942 GGCGACCACCAGTGTACG 60.432 66.667 8.68 8.68 0.00 3.67
1085 1144 3.617263 CCAAGAACCTTCTCGGAATTACG 59.383 47.826 2.83 2.83 33.05 3.18
1179 1244 1.201647 CGCCGTATGATCGTAGGGAAT 59.798 52.381 29.54 1.67 32.62 3.01
1268 1346 9.952030 ACTTAAAAGAAGGAAAACAAATCCAAA 57.048 25.926 0.00 0.00 39.55 3.28
1314 1392 6.071051 GGCAACCCCTGATTTATTTTGACTTA 60.071 38.462 0.00 0.00 0.00 2.24
1318 1396 4.424842 AGGCAACCCCTGATTTATTTTGA 58.575 39.130 0.00 0.00 44.28 2.69
1416 1494 8.547069 GCATGCTTTACATTTCTGTTGTAAAAA 58.453 29.630 11.37 3.42 44.52 1.94
1417 1495 7.170658 GGCATGCTTTACATTTCTGTTGTAAAA 59.829 33.333 18.92 0.00 44.52 1.52
1418 1496 6.644592 GGCATGCTTTACATTTCTGTTGTAAA 59.355 34.615 18.92 8.28 43.59 2.01
1419 1497 6.015519 AGGCATGCTTTACATTTCTGTTGTAA 60.016 34.615 18.92 0.00 36.64 2.41
1420 1498 5.476599 AGGCATGCTTTACATTTCTGTTGTA 59.523 36.000 18.92 0.00 36.64 2.41
1421 1499 4.281688 AGGCATGCTTTACATTTCTGTTGT 59.718 37.500 18.92 0.00 36.64 3.32
1422 1500 4.813027 AGGCATGCTTTACATTTCTGTTG 58.187 39.130 18.92 0.00 36.64 3.33
1423 1501 5.473066 AAGGCATGCTTTACATTTCTGTT 57.527 34.783 18.92 0.00 36.64 3.16
1424 1502 5.476599 TGTAAGGCATGCTTTACATTTCTGT 59.523 36.000 37.27 9.47 41.42 3.41
1425 1503 5.953183 TGTAAGGCATGCTTTACATTTCTG 58.047 37.500 37.27 0.00 41.42 3.02
1426 1504 5.945784 TCTGTAAGGCATGCTTTACATTTCT 59.054 36.000 39.20 16.54 43.88 2.52
1435 1513 5.940617 TGGTATATTCTGTAAGGCATGCTT 58.059 37.500 18.92 7.19 0.00 3.91
1480 1558 6.620678 GCAACAATCAATTTGCTTCTAGGTA 58.379 36.000 0.00 0.00 43.96 3.08
1481 1559 5.473039 GCAACAATCAATTTGCTTCTAGGT 58.527 37.500 0.00 0.00 43.96 3.08
1483 1561 4.560035 CCGCAACAATCAATTTGCTTCTAG 59.440 41.667 4.91 0.00 44.94 2.43
1484 1562 4.022416 ACCGCAACAATCAATTTGCTTCTA 60.022 37.500 4.91 0.00 44.94 2.10
1485 1563 3.243839 ACCGCAACAATCAATTTGCTTCT 60.244 39.130 4.91 0.00 44.94 2.85
1489 1580 2.155539 GTCACCGCAACAATCAATTTGC 59.844 45.455 0.00 0.00 43.90 3.68
1490 1581 2.404693 CGTCACCGCAACAATCAATTTG 59.595 45.455 0.00 0.00 41.36 2.32
1501 1592 1.595466 AATGTTTACCGTCACCGCAA 58.405 45.000 0.00 0.00 0.00 4.85
1502 1593 1.264557 CAAATGTTTACCGTCACCGCA 59.735 47.619 0.00 0.00 0.00 5.69
1531 1625 7.619964 AGGGTTTTAATACAATGTACTTCCG 57.380 36.000 0.00 0.00 0.00 4.30
1592 1686 6.071503 GGTTGAACTACACTCCAGTACATACT 60.072 42.308 0.00 0.00 36.90 2.12
1715 1813 9.458374 GAACGGATATTACAAATTTACAATGGG 57.542 33.333 0.00 0.00 0.00 4.00
1828 1926 2.567615 ACTAAACTTGTCATCCTCCGCT 59.432 45.455 0.00 0.00 0.00 5.52
1888 1986 0.242017 GCGAGCACAGCAATTTCCTT 59.758 50.000 0.00 0.00 34.19 3.36
1905 2003 4.788100 CGAGGATGACAAAATTTAGTTGCG 59.212 41.667 0.00 0.00 0.00 4.85
1947 2045 9.507280 AGACATATGCTAAATCGAACATTTTTG 57.493 29.630 1.58 0.00 0.00 2.44
1952 2051 8.499162 GCTTTAGACATATGCTAAATCGAACAT 58.501 33.333 21.83 0.00 37.25 2.71
1957 2056 7.426929 AAGGCTTTAGACATATGCTAAATCG 57.573 36.000 21.83 16.11 37.25 3.34
1984 2083 8.519799 TTTGGAAATCAGTAGTTTCAGTTTCT 57.480 30.769 0.00 0.00 37.32 2.52
2046 2147 7.832685 TCTTGTAGGCTAAGATCTTGTACACTA 59.167 37.037 18.47 9.89 29.68 2.74
2047 2148 6.663953 TCTTGTAGGCTAAGATCTTGTACACT 59.336 38.462 18.47 10.78 29.68 3.55
2048 2149 6.752815 GTCTTGTAGGCTAAGATCTTGTACAC 59.247 42.308 18.47 9.55 36.63 2.90
2050 2151 6.097129 AGGTCTTGTAGGCTAAGATCTTGTAC 59.903 42.308 18.47 13.31 41.57 2.90
2051 2152 6.195700 AGGTCTTGTAGGCTAAGATCTTGTA 58.804 40.000 18.47 0.00 41.57 2.41
2055 2156 5.273208 TCAAGGTCTTGTAGGCTAAGATCT 58.727 41.667 6.93 6.93 45.11 2.75
2056 2157 5.599999 TCAAGGTCTTGTAGGCTAAGATC 57.400 43.478 10.10 2.90 41.16 2.75
2057 2158 6.374417 TTTCAAGGTCTTGTAGGCTAAGAT 57.626 37.500 10.10 0.00 41.16 2.40
2058 2159 5.280011 CCTTTCAAGGTCTTGTAGGCTAAGA 60.280 44.000 15.73 0.00 41.41 2.10
2059 2160 4.938226 CCTTTCAAGGTCTTGTAGGCTAAG 59.062 45.833 15.73 0.00 41.41 2.18
2060 2161 4.595781 TCCTTTCAAGGTCTTGTAGGCTAA 59.404 41.667 19.71 8.66 46.54 3.09
2061 2162 4.164981 TCCTTTCAAGGTCTTGTAGGCTA 58.835 43.478 19.71 0.00 46.54 3.93
2062 2163 2.979678 TCCTTTCAAGGTCTTGTAGGCT 59.020 45.455 19.71 0.00 46.54 4.58
2063 2164 3.418684 TCCTTTCAAGGTCTTGTAGGC 57.581 47.619 19.71 0.00 46.54 3.93
2102 2203 5.119743 GCTAGCTGCAATTCTTTCCTTTTTG 59.880 40.000 7.70 0.00 42.31 2.44
2124 2225 1.418334 AATCCTAGACATCCAGCGCT 58.582 50.000 2.64 2.64 0.00 5.92
2125 2226 3.386768 TTAATCCTAGACATCCAGCGC 57.613 47.619 0.00 0.00 0.00 5.92
2126 2227 4.926238 GTGATTAATCCTAGACATCCAGCG 59.074 45.833 12.90 0.00 0.00 5.18
2127 2228 5.858381 TGTGATTAATCCTAGACATCCAGC 58.142 41.667 12.90 0.00 0.00 4.85
2128 2229 7.674120 TGATGTGATTAATCCTAGACATCCAG 58.326 38.462 27.29 0.00 36.47 3.86
2130 2231 7.038729 TCCTGATGTGATTAATCCTAGACATCC 60.039 40.741 27.29 17.51 36.47 3.51
2131 2232 7.901029 TCCTGATGTGATTAATCCTAGACATC 58.099 38.462 25.47 25.47 37.18 3.06
2132 2233 7.862274 TCCTGATGTGATTAATCCTAGACAT 57.138 36.000 15.36 15.36 0.00 3.06
2133 2234 7.510343 TCATCCTGATGTGATTAATCCTAGACA 59.490 37.037 12.90 10.36 39.72 3.41
2134 2235 7.901029 TCATCCTGATGTGATTAATCCTAGAC 58.099 38.462 12.90 5.01 39.72 2.59
2137 2238 7.018769 TCCTCATCCTGATGTGATTAATCCTA 58.981 38.462 12.90 2.35 39.72 2.94
2152 2258 4.518211 GGCACAAGATTAATCCTCATCCTG 59.482 45.833 11.92 1.89 0.00 3.86
2154 2260 4.518211 CAGGCACAAGATTAATCCTCATCC 59.482 45.833 11.92 8.36 0.00 3.51
2158 2264 5.649831 AGAAACAGGCACAAGATTAATCCTC 59.350 40.000 11.92 0.00 0.00 3.71
2205 2311 4.339530 CCTTTGTACAGAGATCTCATCGGA 59.660 45.833 24.39 6.57 0.00 4.55
2429 2541 6.391227 ACTTTCTGTTGTGGGTGATAAAAG 57.609 37.500 0.00 0.00 0.00 2.27
2431 2543 6.597562 AGTACTTTCTGTTGTGGGTGATAAA 58.402 36.000 0.00 0.00 0.00 1.40
2925 3178 2.879462 CACTTCTCGTACGCCGGC 60.879 66.667 19.07 19.07 37.11 6.13
3351 3604 3.016971 TCCATGGCCCACTCCAGG 61.017 66.667 6.96 0.00 39.89 4.45
3459 3712 1.137825 CGTCTCGAAGTGGCTCTCC 59.862 63.158 0.00 0.00 0.00 3.71
3630 3883 3.259314 AGCACCATGCCCTCCACA 61.259 61.111 0.00 0.00 46.52 4.17
3717 3970 4.268939 TCGACGACGTTGCCGGTT 62.269 61.111 11.76 0.00 40.69 4.44
3718 3971 4.988486 GTCGACGACGTTGCCGGT 62.988 66.667 12.94 0.00 40.69 5.28
3813 4066 0.599060 TGAACGTGTACTCGCCATGA 59.401 50.000 16.66 0.00 0.00 3.07
3827 4080 3.932289 GGTGAGTCACCGTGAACG 58.068 61.111 26.12 0.00 44.95 3.95
4018 4273 4.080863 ACAAAATCTTATCAGAGACGGGCT 60.081 41.667 0.00 0.00 30.36 5.19
4037 4292 4.640771 AGAGGCAGGATAAGAACACAAA 57.359 40.909 0.00 0.00 0.00 2.83
4040 4295 4.479786 AGAAGAGGCAGGATAAGAACAC 57.520 45.455 0.00 0.00 0.00 3.32
4041 4296 4.836825 CAAGAAGAGGCAGGATAAGAACA 58.163 43.478 0.00 0.00 0.00 3.18
4042 4297 3.625313 GCAAGAAGAGGCAGGATAAGAAC 59.375 47.826 0.00 0.00 0.00 3.01
4043 4298 3.521126 AGCAAGAAGAGGCAGGATAAGAA 59.479 43.478 0.00 0.00 0.00 2.52
4045 4300 3.557228 AGCAAGAAGAGGCAGGATAAG 57.443 47.619 0.00 0.00 0.00 1.73
4047 4302 2.700897 GGTAGCAAGAAGAGGCAGGATA 59.299 50.000 0.00 0.00 0.00 2.59
4048 4303 1.488393 GGTAGCAAGAAGAGGCAGGAT 59.512 52.381 0.00 0.00 0.00 3.24
4049 4304 0.905357 GGTAGCAAGAAGAGGCAGGA 59.095 55.000 0.00 0.00 0.00 3.86
4050 4305 0.107459 GGGTAGCAAGAAGAGGCAGG 60.107 60.000 0.00 0.00 0.00 4.85
4051 4306 0.908198 AGGGTAGCAAGAAGAGGCAG 59.092 55.000 0.00 0.00 0.00 4.85
4052 4307 0.905357 GAGGGTAGCAAGAAGAGGCA 59.095 55.000 0.00 0.00 0.00 4.75
4053 4308 0.905357 TGAGGGTAGCAAGAAGAGGC 59.095 55.000 0.00 0.00 0.00 4.70
4054 4309 1.134551 GCTGAGGGTAGCAAGAAGAGG 60.135 57.143 0.00 0.00 43.17 3.69
4055 4310 2.307934 GCTGAGGGTAGCAAGAAGAG 57.692 55.000 0.00 0.00 43.17 2.85
4068 4323 2.675056 GCTGCTTGACGTGCTGAGG 61.675 63.158 0.00 0.00 0.00 3.86
4085 4347 3.494251 ACGACAATTCATTGCCTTTTTGC 59.506 39.130 0.00 0.00 41.38 3.68
4092 4354 2.505866 GTTCGACGACAATTCATTGCC 58.494 47.619 0.00 0.00 41.38 4.52
4106 4368 4.446719 ACATTGTCTAAAACTCGGTTCGAC 59.553 41.667 0.00 0.00 0.00 4.20
4107 4369 4.624015 ACATTGTCTAAAACTCGGTTCGA 58.376 39.130 0.00 0.00 0.00 3.71
4108 4370 4.432503 CGACATTGTCTAAAACTCGGTTCG 60.433 45.833 14.54 0.00 0.00 3.95
4109 4371 4.446719 ACGACATTGTCTAAAACTCGGTTC 59.553 41.667 14.54 0.00 0.00 3.62
4110 4372 4.374399 ACGACATTGTCTAAAACTCGGTT 58.626 39.130 14.54 0.00 0.00 4.44
4128 4390 0.464036 TCATGGCCACAGGATACGAC 59.536 55.000 8.16 0.00 46.39 4.34
4129 4391 1.199615 TTCATGGCCACAGGATACGA 58.800 50.000 8.16 0.00 46.39 3.43
4130 4392 2.260844 ATTCATGGCCACAGGATACG 57.739 50.000 8.16 0.00 46.39 3.06
4131 4393 5.316167 TCAATATTCATGGCCACAGGATAC 58.684 41.667 8.16 0.00 37.24 2.24
4132 4394 5.581350 TCAATATTCATGGCCACAGGATA 57.419 39.130 8.16 9.24 37.24 2.59
4133 4395 4.458256 TCAATATTCATGGCCACAGGAT 57.542 40.909 8.16 6.84 37.24 3.24
4134 4396 3.949586 TCAATATTCATGGCCACAGGA 57.050 42.857 8.16 2.90 35.29 3.86
4135 4397 3.243636 GCTTCAATATTCATGGCCACAGG 60.244 47.826 8.16 0.00 0.00 4.00
4137 4399 2.358582 CGCTTCAATATTCATGGCCACA 59.641 45.455 8.16 0.00 0.00 4.17
4138 4400 2.358898 ACGCTTCAATATTCATGGCCAC 59.641 45.455 8.16 0.00 0.00 5.01
4139 4401 2.653726 ACGCTTCAATATTCATGGCCA 58.346 42.857 8.56 8.56 0.00 5.36
4140 4402 3.374745 CAACGCTTCAATATTCATGGCC 58.625 45.455 0.00 0.00 0.00 5.36
4141 4403 2.791004 GCAACGCTTCAATATTCATGGC 59.209 45.455 0.00 0.00 0.00 4.40
4142 4404 4.031418 TGCAACGCTTCAATATTCATGG 57.969 40.909 0.00 0.00 0.00 3.66
4200 4466 9.485206 GAGATGCCCTAAGTAAACGATTTTATA 57.515 33.333 0.00 0.00 29.82 0.98
4201 4467 7.444487 GGAGATGCCCTAAGTAAACGATTTTAT 59.556 37.037 0.00 0.00 29.82 1.40
4202 4468 6.764560 GGAGATGCCCTAAGTAAACGATTTTA 59.235 38.462 0.00 0.00 0.00 1.52
4203 4469 5.589050 GGAGATGCCCTAAGTAAACGATTTT 59.411 40.000 0.00 0.00 0.00 1.82
4204 4470 5.123936 GGAGATGCCCTAAGTAAACGATTT 58.876 41.667 0.00 0.00 0.00 2.17
4205 4471 4.163458 TGGAGATGCCCTAAGTAAACGATT 59.837 41.667 0.00 0.00 34.97 3.34
4206 4472 3.709653 TGGAGATGCCCTAAGTAAACGAT 59.290 43.478 0.00 0.00 34.97 3.73
4207 4473 3.101437 TGGAGATGCCCTAAGTAAACGA 58.899 45.455 0.00 0.00 34.97 3.85
4208 4474 3.536956 TGGAGATGCCCTAAGTAAACG 57.463 47.619 0.00 0.00 34.97 3.60
4209 4475 3.621715 CGTTGGAGATGCCCTAAGTAAAC 59.378 47.826 0.00 0.00 34.97 2.01
4210 4476 3.869065 CGTTGGAGATGCCCTAAGTAAA 58.131 45.455 0.00 0.00 34.97 2.01
4211 4477 2.419574 GCGTTGGAGATGCCCTAAGTAA 60.420 50.000 0.00 0.00 34.03 2.24
4212 4478 1.138266 GCGTTGGAGATGCCCTAAGTA 59.862 52.381 0.00 0.00 34.03 2.24
4213 4479 0.107654 GCGTTGGAGATGCCCTAAGT 60.108 55.000 0.00 0.00 34.03 2.24
4214 4480 2.695314 GCGTTGGAGATGCCCTAAG 58.305 57.895 0.00 0.00 34.03 2.18
4215 4481 4.954933 GCGTTGGAGATGCCCTAA 57.045 55.556 0.00 0.00 34.03 2.69
4220 4486 0.811616 AAGATCGGCGTTGGAGATGC 60.812 55.000 6.85 0.00 39.65 3.91
4221 4487 1.212616 GAAGATCGGCGTTGGAGATG 58.787 55.000 6.85 0.00 0.00 2.90
4222 4488 0.824109 TGAAGATCGGCGTTGGAGAT 59.176 50.000 6.85 0.00 0.00 2.75
4223 4489 0.606096 TTGAAGATCGGCGTTGGAGA 59.394 50.000 6.85 0.00 0.00 3.71
4224 4490 1.128692 GTTTGAAGATCGGCGTTGGAG 59.871 52.381 6.85 0.00 0.00 3.86
4225 4491 1.153353 GTTTGAAGATCGGCGTTGGA 58.847 50.000 6.85 0.00 0.00 3.53
4226 4492 0.168128 GGTTTGAAGATCGGCGTTGG 59.832 55.000 6.85 0.00 0.00 3.77
4227 4493 0.871722 TGGTTTGAAGATCGGCGTTG 59.128 50.000 6.85 0.00 0.00 4.10
4228 4494 0.872388 GTGGTTTGAAGATCGGCGTT 59.128 50.000 6.85 0.00 0.00 4.84
4229 4495 0.250124 TGTGGTTTGAAGATCGGCGT 60.250 50.000 6.85 0.00 0.00 5.68
4230 4496 0.165944 GTGTGGTTTGAAGATCGGCG 59.834 55.000 0.00 0.00 0.00 6.46
4231 4497 0.165944 CGTGTGGTTTGAAGATCGGC 59.834 55.000 0.00 0.00 0.00 5.54
4232 4498 0.165944 GCGTGTGGTTTGAAGATCGG 59.834 55.000 0.00 0.00 0.00 4.18
4233 4499 0.865111 TGCGTGTGGTTTGAAGATCG 59.135 50.000 0.00 0.00 0.00 3.69
4234 4500 3.435327 TGTATGCGTGTGGTTTGAAGATC 59.565 43.478 0.00 0.00 0.00 2.75
4235 4501 3.407698 TGTATGCGTGTGGTTTGAAGAT 58.592 40.909 0.00 0.00 0.00 2.40
4236 4502 2.839975 TGTATGCGTGTGGTTTGAAGA 58.160 42.857 0.00 0.00 0.00 2.87
4237 4503 3.426159 GGATGTATGCGTGTGGTTTGAAG 60.426 47.826 0.00 0.00 0.00 3.02
4238 4504 2.486203 GGATGTATGCGTGTGGTTTGAA 59.514 45.455 0.00 0.00 0.00 2.69
4239 4505 2.080693 GGATGTATGCGTGTGGTTTGA 58.919 47.619 0.00 0.00 0.00 2.69
4240 4506 1.202020 CGGATGTATGCGTGTGGTTTG 60.202 52.381 0.00 0.00 36.84 2.93
4241 4507 1.083489 CGGATGTATGCGTGTGGTTT 58.917 50.000 0.00 0.00 36.84 3.27
4242 4508 0.742990 CCGGATGTATGCGTGTGGTT 60.743 55.000 0.00 0.00 40.15 3.67
4243 4509 1.153449 CCGGATGTATGCGTGTGGT 60.153 57.895 0.00 0.00 40.15 4.16
4244 4510 1.142965 TCCGGATGTATGCGTGTGG 59.857 57.895 0.00 0.00 40.15 4.17
4245 4511 1.151777 GGTCCGGATGTATGCGTGTG 61.152 60.000 7.81 0.00 40.15 3.82
4246 4512 1.143183 GGTCCGGATGTATGCGTGT 59.857 57.895 7.81 0.00 40.15 4.49
4247 4513 0.597637 GAGGTCCGGATGTATGCGTG 60.598 60.000 7.81 0.00 40.15 5.34
4248 4514 1.740285 GAGGTCCGGATGTATGCGT 59.260 57.895 7.81 0.00 40.15 5.24
4249 4515 1.371758 CGAGGTCCGGATGTATGCG 60.372 63.158 7.81 2.41 41.50 4.73
4250 4516 1.664965 GCGAGGTCCGGATGTATGC 60.665 63.158 7.81 5.06 39.04 3.14
4251 4517 1.371758 CGCGAGGTCCGGATGTATG 60.372 63.158 7.81 0.00 39.04 2.39
4252 4518 3.039988 CGCGAGGTCCGGATGTAT 58.960 61.111 7.81 0.00 39.04 2.29
4264 4530 3.089784 CGGGATTCAAACCGCGAG 58.910 61.111 8.23 0.00 43.96 5.03
4269 4535 2.122783 TGACATCCGGGATTCAAACC 57.877 50.000 6.84 0.00 0.00 3.27
4270 4536 2.618709 GGATGACATCCGGGATTCAAAC 59.381 50.000 18.63 16.13 40.13 2.93
4271 4537 2.930950 GGATGACATCCGGGATTCAAA 58.069 47.619 18.63 4.21 40.13 2.69
4272 4538 2.638480 GGATGACATCCGGGATTCAA 57.362 50.000 18.63 5.66 40.13 2.69
4282 4548 2.823829 GCCCGCGTTGGATGACATC 61.824 63.158 4.92 6.91 42.00 3.06
4283 4549 2.824041 GCCCGCGTTGGATGACAT 60.824 61.111 4.92 0.00 42.00 3.06
4285 4551 4.778143 AGGCCCGCGTTGGATGAC 62.778 66.667 4.92 0.00 42.00 3.06
4286 4552 4.776322 CAGGCCCGCGTTGGATGA 62.776 66.667 4.92 0.00 42.00 2.92
4287 4553 3.673956 TACAGGCCCGCGTTGGATG 62.674 63.158 4.92 5.49 42.00 3.51
4288 4554 3.395702 TACAGGCCCGCGTTGGAT 61.396 61.111 4.92 0.00 42.00 3.41
4289 4555 4.382320 GTACAGGCCCGCGTTGGA 62.382 66.667 4.92 0.00 42.00 3.53
4290 4556 4.690719 TGTACAGGCCCGCGTTGG 62.691 66.667 4.92 0.00 37.55 3.77
4291 4557 2.666862 TTGTACAGGCCCGCGTTG 60.667 61.111 4.92 0.09 0.00 4.10
4292 4558 2.667199 GTTGTACAGGCCCGCGTT 60.667 61.111 4.92 0.00 0.00 4.84
4293 4559 4.692475 GGTTGTACAGGCCCGCGT 62.692 66.667 4.92 0.00 0.00 6.01
4298 4564 4.382320 TCGGCGGTTGTACAGGCC 62.382 66.667 19.23 19.23 42.14 5.19
4299 4565 3.116531 GTCGGCGGTTGTACAGGC 61.117 66.667 7.21 1.28 35.65 4.85
4300 4566 2.433664 GGTCGGCGGTTGTACAGG 60.434 66.667 7.21 0.00 0.00 4.00
4301 4567 1.736645 CTGGTCGGCGGTTGTACAG 60.737 63.158 7.21 3.16 0.00 2.74
4302 4568 2.340809 CTGGTCGGCGGTTGTACA 59.659 61.111 7.21 0.00 0.00 2.90
4303 4569 1.735559 GACTGGTCGGCGGTTGTAC 60.736 63.158 7.21 0.00 0.00 2.90
4304 4570 2.652530 GACTGGTCGGCGGTTGTA 59.347 61.111 7.21 0.00 0.00 2.41
4305 4571 4.309950 GGACTGGTCGGCGGTTGT 62.310 66.667 7.21 0.84 0.00 3.32
4310 4576 3.851845 TTGTTCGGACTGGTCGGCG 62.852 63.158 0.00 0.00 0.00 6.46
4311 4577 2.029964 TTGTTCGGACTGGTCGGC 59.970 61.111 0.00 0.00 0.00 5.54
4647 4913 0.663269 GCGGGCAACTACAAAAGTGC 60.663 55.000 0.00 0.00 38.88 4.40
4648 4914 0.665835 TGCGGGCAACTACAAAAGTG 59.334 50.000 0.00 0.00 38.88 3.16
4649 4915 0.666374 GTGCGGGCAACTACAAAAGT 59.334 50.000 0.00 0.00 41.49 2.66
4650 4916 0.951558 AGTGCGGGCAACTACAAAAG 59.048 50.000 0.00 0.00 0.00 2.27
4651 4917 0.665835 CAGTGCGGGCAACTACAAAA 59.334 50.000 0.00 0.00 0.00 2.44
4652 4918 0.464735 ACAGTGCGGGCAACTACAAA 60.465 50.000 0.00 0.00 0.00 2.83
4653 4919 0.464735 AACAGTGCGGGCAACTACAA 60.465 50.000 0.00 0.00 0.00 2.41
4654 4920 0.464735 AAACAGTGCGGGCAACTACA 60.465 50.000 0.00 0.00 0.00 2.74
4655 4921 0.237498 GAAACAGTGCGGGCAACTAC 59.763 55.000 0.00 0.00 0.00 2.73
4656 4922 0.887387 GGAAACAGTGCGGGCAACTA 60.887 55.000 0.00 0.00 0.00 2.24
4657 4923 2.193536 GGAAACAGTGCGGGCAACT 61.194 57.895 0.00 0.00 0.00 3.16
4658 4924 2.335011 GGAAACAGTGCGGGCAAC 59.665 61.111 0.00 0.00 0.00 4.17
4659 4925 3.283684 CGGAAACAGTGCGGGCAA 61.284 61.111 0.00 0.00 37.43 4.52
4662 4928 3.726517 CTGCGGAAACAGTGCGGG 61.727 66.667 0.00 0.00 42.17 6.13
4663 4929 4.389576 GCTGCGGAAACAGTGCGG 62.390 66.667 0.00 0.00 42.17 5.69
4664 4930 2.660553 TTTGCTGCGGAAACAGTGCG 62.661 55.000 0.00 0.00 45.20 5.34
4665 4931 0.527385 TTTTGCTGCGGAAACAGTGC 60.527 50.000 0.00 0.00 39.96 4.40
4666 4932 2.053627 GATTTTGCTGCGGAAACAGTG 58.946 47.619 0.00 0.00 39.96 3.66
4667 4933 1.000274 GGATTTTGCTGCGGAAACAGT 60.000 47.619 0.00 0.00 39.96 3.55
4668 4934 1.669795 GGGATTTTGCTGCGGAAACAG 60.670 52.381 0.00 0.00 40.80 3.16
4669 4935 0.316841 GGGATTTTGCTGCGGAAACA 59.683 50.000 0.00 0.00 0.00 2.83
4670 4936 0.389817 GGGGATTTTGCTGCGGAAAC 60.390 55.000 0.00 0.00 0.00 2.78
4671 4937 1.872197 CGGGGATTTTGCTGCGGAAA 61.872 55.000 0.00 0.00 0.00 3.13
4672 4938 2.339556 CGGGGATTTTGCTGCGGAA 61.340 57.895 0.00 0.00 0.00 4.30
4673 4939 2.749839 CGGGGATTTTGCTGCGGA 60.750 61.111 0.00 0.00 0.00 5.54
4674 4940 4.496927 GCGGGGATTTTGCTGCGG 62.497 66.667 0.00 0.00 0.00 5.69
4675 4941 3.401243 GAGCGGGGATTTTGCTGCG 62.401 63.158 0.00 0.00 39.49 5.18
4676 4942 0.748005 TAGAGCGGGGATTTTGCTGC 60.748 55.000 0.00 0.00 39.49 5.25
4677 4943 1.972872 ATAGAGCGGGGATTTTGCTG 58.027 50.000 0.00 0.00 39.49 4.41
4678 4944 2.173569 AGAATAGAGCGGGGATTTTGCT 59.826 45.455 0.00 0.00 42.73 3.91
4679 4945 2.576615 AGAATAGAGCGGGGATTTTGC 58.423 47.619 0.00 0.00 0.00 3.68
4680 4946 3.565902 GGAAGAATAGAGCGGGGATTTTG 59.434 47.826 0.00 0.00 0.00 2.44
4681 4947 3.202151 TGGAAGAATAGAGCGGGGATTTT 59.798 43.478 0.00 0.00 0.00 1.82
4682 4948 2.777692 TGGAAGAATAGAGCGGGGATTT 59.222 45.455 0.00 0.00 0.00 2.17
4683 4949 2.408565 TGGAAGAATAGAGCGGGGATT 58.591 47.619 0.00 0.00 0.00 3.01
4684 4950 2.103153 TGGAAGAATAGAGCGGGGAT 57.897 50.000 0.00 0.00 0.00 3.85
4685 4951 1.971357 GATGGAAGAATAGAGCGGGGA 59.029 52.381 0.00 0.00 0.00 4.81
4686 4952 1.337260 CGATGGAAGAATAGAGCGGGG 60.337 57.143 0.00 0.00 0.00 5.73
4687 4953 1.937108 GCGATGGAAGAATAGAGCGGG 60.937 57.143 0.00 0.00 0.00 6.13
4688 4954 1.423395 GCGATGGAAGAATAGAGCGG 58.577 55.000 0.00 0.00 0.00 5.52
4689 4955 1.056103 CGCGATGGAAGAATAGAGCG 58.944 55.000 0.00 0.00 40.37 5.03
4690 4956 0.787183 GCGCGATGGAAGAATAGAGC 59.213 55.000 12.10 0.00 0.00 4.09
4691 4957 1.423395 GGCGCGATGGAAGAATAGAG 58.577 55.000 12.10 0.00 0.00 2.43
4692 4958 0.318699 CGGCGCGATGGAAGAATAGA 60.319 55.000 12.10 0.00 0.00 1.98
4693 4959 1.891060 GCGGCGCGATGGAAGAATAG 61.891 60.000 19.09 0.00 0.00 1.73
4694 4960 1.954146 GCGGCGCGATGGAAGAATA 60.954 57.895 19.09 0.00 0.00 1.75
4695 4961 3.272334 GCGGCGCGATGGAAGAAT 61.272 61.111 19.09 0.00 0.00 2.40
4696 4962 4.451150 AGCGGCGCGATGGAAGAA 62.451 61.111 27.59 0.00 0.00 2.52
4697 4963 4.873129 GAGCGGCGCGATGGAAGA 62.873 66.667 27.59 0.00 0.00 2.87
4698 4964 4.880537 AGAGCGGCGCGATGGAAG 62.881 66.667 27.59 0.00 0.00 3.46
4699 4965 4.873129 GAGAGCGGCGCGATGGAA 62.873 66.667 27.59 0.00 0.00 3.53
4702 4968 4.957684 ATGGAGAGCGGCGCGATG 62.958 66.667 27.59 0.76 0.00 3.84
4703 4969 4.654412 GATGGAGAGCGGCGCGAT 62.654 66.667 27.59 19.30 0.00 4.58
4706 4972 4.838152 TTGGATGGAGAGCGGCGC 62.838 66.667 26.86 26.86 0.00 6.53
4707 4973 1.502163 GAATTGGATGGAGAGCGGCG 61.502 60.000 0.51 0.51 0.00 6.46
4708 4974 1.169034 GGAATTGGATGGAGAGCGGC 61.169 60.000 0.00 0.00 0.00 6.53
4709 4975 0.536006 GGGAATTGGATGGAGAGCGG 60.536 60.000 0.00 0.00 0.00 5.52
4710 4976 0.882042 CGGGAATTGGATGGAGAGCG 60.882 60.000 0.00 0.00 0.00 5.03
4711 4977 0.181350 ACGGGAATTGGATGGAGAGC 59.819 55.000 0.00 0.00 0.00 4.09
4712 4978 1.202698 GGACGGGAATTGGATGGAGAG 60.203 57.143 0.00 0.00 0.00 3.20
4713 4979 0.837272 GGACGGGAATTGGATGGAGA 59.163 55.000 0.00 0.00 0.00 3.71
4714 4980 0.839946 AGGACGGGAATTGGATGGAG 59.160 55.000 0.00 0.00 0.00 3.86
4715 4981 1.211949 GAAGGACGGGAATTGGATGGA 59.788 52.381 0.00 0.00 0.00 3.41
4716 4982 1.212935 AGAAGGACGGGAATTGGATGG 59.787 52.381 0.00 0.00 0.00 3.51
4717 4983 2.171448 AGAGAAGGACGGGAATTGGATG 59.829 50.000 0.00 0.00 0.00 3.51
4718 4984 2.436173 GAGAGAAGGACGGGAATTGGAT 59.564 50.000 0.00 0.00 0.00 3.41
4719 4985 1.831736 GAGAGAAGGACGGGAATTGGA 59.168 52.381 0.00 0.00 0.00 3.53
4720 4986 1.134371 GGAGAGAAGGACGGGAATTGG 60.134 57.143 0.00 0.00 0.00 3.16
4721 4987 1.134371 GGGAGAGAAGGACGGGAATTG 60.134 57.143 0.00 0.00 0.00 2.32
4722 4988 1.205055 GGGAGAGAAGGACGGGAATT 58.795 55.000 0.00 0.00 0.00 2.17
4723 4989 0.042731 TGGGAGAGAAGGACGGGAAT 59.957 55.000 0.00 0.00 0.00 3.01
4724 4990 0.903454 GTGGGAGAGAAGGACGGGAA 60.903 60.000 0.00 0.00 0.00 3.97
4725 4991 1.305046 GTGGGAGAGAAGGACGGGA 60.305 63.158 0.00 0.00 0.00 5.14
4726 4992 1.305381 AGTGGGAGAGAAGGACGGG 60.305 63.158 0.00 0.00 0.00 5.28
4727 4993 0.323908 AGAGTGGGAGAGAAGGACGG 60.324 60.000 0.00 0.00 0.00 4.79
4728 4994 1.099689 GAGAGTGGGAGAGAAGGACG 58.900 60.000 0.00 0.00 0.00 4.79
4729 4995 2.525105 AGAGAGTGGGAGAGAAGGAC 57.475 55.000 0.00 0.00 0.00 3.85
4730 4996 2.652348 AGAAGAGAGTGGGAGAGAAGGA 59.348 50.000 0.00 0.00 0.00 3.36
4731 4997 3.100207 AGAAGAGAGTGGGAGAGAAGG 57.900 52.381 0.00 0.00 0.00 3.46
4732 4998 3.447229 GGAAGAAGAGAGTGGGAGAGAAG 59.553 52.174 0.00 0.00 0.00 2.85
4733 4999 3.436243 GGAAGAAGAGAGTGGGAGAGAA 58.564 50.000 0.00 0.00 0.00 2.87
4734 5000 2.291930 GGGAAGAAGAGAGTGGGAGAGA 60.292 54.545 0.00 0.00 0.00 3.10
4735 5001 2.107366 GGGAAGAAGAGAGTGGGAGAG 58.893 57.143 0.00 0.00 0.00 3.20
4736 5002 1.719378 AGGGAAGAAGAGAGTGGGAGA 59.281 52.381 0.00 0.00 0.00 3.71
4737 5003 2.107366 GAGGGAAGAAGAGAGTGGGAG 58.893 57.143 0.00 0.00 0.00 4.30
4738 5004 1.273324 GGAGGGAAGAAGAGAGTGGGA 60.273 57.143 0.00 0.00 0.00 4.37
4739 5005 1.199615 GGAGGGAAGAAGAGAGTGGG 58.800 60.000 0.00 0.00 0.00 4.61
4740 5006 1.199615 GGGAGGGAAGAAGAGAGTGG 58.800 60.000 0.00 0.00 0.00 4.00
4741 5007 0.820871 CGGGAGGGAAGAAGAGAGTG 59.179 60.000 0.00 0.00 0.00 3.51
4742 5008 0.973496 GCGGGAGGGAAGAAGAGAGT 60.973 60.000 0.00 0.00 0.00 3.24
4743 5009 0.686112 AGCGGGAGGGAAGAAGAGAG 60.686 60.000 0.00 0.00 0.00 3.20
4744 5010 0.972983 CAGCGGGAGGGAAGAAGAGA 60.973 60.000 0.00 0.00 0.00 3.10
4745 5011 1.519719 CAGCGGGAGGGAAGAAGAG 59.480 63.158 0.00 0.00 0.00 2.85
4746 5012 2.660064 GCAGCGGGAGGGAAGAAGA 61.660 63.158 0.00 0.00 0.00 2.87
4747 5013 2.124942 GCAGCGGGAGGGAAGAAG 60.125 66.667 0.00 0.00 0.00 2.85
4748 5014 3.717294 GGCAGCGGGAGGGAAGAA 61.717 66.667 0.00 0.00 0.00 2.52
4764 5030 4.351938 TCTGGTTCCACGCGTCGG 62.352 66.667 9.86 15.27 0.00 4.79
4765 5031 3.103911 GTCTGGTTCCACGCGTCG 61.104 66.667 9.86 1.68 0.00 5.12
4766 5032 2.814183 ATCGTCTGGTTCCACGCGTC 62.814 60.000 9.86 0.00 35.93 5.19
4767 5033 1.588824 TATCGTCTGGTTCCACGCGT 61.589 55.000 5.58 5.58 35.93 6.01
4768 5034 0.866061 CTATCGTCTGGTTCCACGCG 60.866 60.000 3.53 3.53 35.93 6.01
4769 5035 1.146358 GCTATCGTCTGGTTCCACGC 61.146 60.000 0.00 0.00 35.93 5.34
4770 5036 0.172578 TGCTATCGTCTGGTTCCACG 59.827 55.000 0.00 0.00 37.36 4.94
4771 5037 2.205074 CATGCTATCGTCTGGTTCCAC 58.795 52.381 0.00 0.00 0.00 4.02
4772 5038 1.473257 GCATGCTATCGTCTGGTTCCA 60.473 52.381 11.37 0.00 0.00 3.53
4773 5039 1.221414 GCATGCTATCGTCTGGTTCC 58.779 55.000 11.37 0.00 0.00 3.62
4774 5040 1.221414 GGCATGCTATCGTCTGGTTC 58.779 55.000 18.92 0.00 0.00 3.62
4775 5041 0.541392 TGGCATGCTATCGTCTGGTT 59.459 50.000 18.92 0.00 0.00 3.67
4776 5042 0.105593 CTGGCATGCTATCGTCTGGT 59.894 55.000 18.92 0.00 0.00 4.00
4777 5043 0.390492 TCTGGCATGCTATCGTCTGG 59.610 55.000 18.92 0.00 0.00 3.86
4778 5044 1.068281 ACTCTGGCATGCTATCGTCTG 59.932 52.381 18.92 3.84 0.00 3.51
4779 5045 1.407936 ACTCTGGCATGCTATCGTCT 58.592 50.000 18.92 0.00 0.00 4.18
4780 5046 1.863454 CAACTCTGGCATGCTATCGTC 59.137 52.381 18.92 0.00 0.00 4.20
4781 5047 1.473965 CCAACTCTGGCATGCTATCGT 60.474 52.381 18.92 8.55 35.39 3.73
4782 5048 1.202568 TCCAACTCTGGCATGCTATCG 60.203 52.381 18.92 7.88 43.17 2.92
4783 5049 2.492012 CTCCAACTCTGGCATGCTATC 58.508 52.381 18.92 0.95 43.17 2.08
4784 5050 1.142465 CCTCCAACTCTGGCATGCTAT 59.858 52.381 18.92 0.00 43.17 2.97
4785 5051 0.543277 CCTCCAACTCTGGCATGCTA 59.457 55.000 18.92 11.28 43.17 3.49
4786 5052 1.302285 CCTCCAACTCTGGCATGCT 59.698 57.895 18.92 0.00 43.17 3.79
4787 5053 1.001641 ACCTCCAACTCTGGCATGC 60.002 57.895 9.90 9.90 43.17 4.06
4788 5054 0.742281 CGACCTCCAACTCTGGCATG 60.742 60.000 0.00 0.00 43.17 4.06
4789 5055 1.194781 ACGACCTCCAACTCTGGCAT 61.195 55.000 0.00 0.00 43.17 4.40
4790 5056 1.837051 ACGACCTCCAACTCTGGCA 60.837 57.895 0.00 0.00 43.17 4.92
4791 5057 1.374758 CACGACCTCCAACTCTGGC 60.375 63.158 0.00 0.00 43.17 4.85
4792 5058 1.185618 TCCACGACCTCCAACTCTGG 61.186 60.000 0.00 0.00 45.08 3.86
4793 5059 0.244994 CTCCACGACCTCCAACTCTG 59.755 60.000 0.00 0.00 0.00 3.35
4794 5060 0.900647 CCTCCACGACCTCCAACTCT 60.901 60.000 0.00 0.00 0.00 3.24
4795 5061 1.186267 ACCTCCACGACCTCCAACTC 61.186 60.000 0.00 0.00 0.00 3.01
4796 5062 1.152312 ACCTCCACGACCTCCAACT 60.152 57.895 0.00 0.00 0.00 3.16
4797 5063 1.004918 CACCTCCACGACCTCCAAC 60.005 63.158 0.00 0.00 0.00 3.77
4798 5064 2.879233 GCACCTCCACGACCTCCAA 61.879 63.158 0.00 0.00 0.00 3.53
4799 5065 3.311110 GCACCTCCACGACCTCCA 61.311 66.667 0.00 0.00 0.00 3.86
4800 5066 3.302347 CTGCACCTCCACGACCTCC 62.302 68.421 0.00 0.00 0.00 4.30
4801 5067 2.262915 CTGCACCTCCACGACCTC 59.737 66.667 0.00 0.00 0.00 3.85
4802 5068 3.314331 CCTGCACCTCCACGACCT 61.314 66.667 0.00 0.00 0.00 3.85
4803 5069 3.302347 CTCCTGCACCTCCACGACC 62.302 68.421 0.00 0.00 0.00 4.79
4804 5070 2.262915 CTCCTGCACCTCCACGAC 59.737 66.667 0.00 0.00 0.00 4.34
4805 5071 2.997315 CCTCCTGCACCTCCACGA 60.997 66.667 0.00 0.00 0.00 4.35
4806 5072 2.583441 TTCCTCCTGCACCTCCACG 61.583 63.158 0.00 0.00 0.00 4.94
4807 5073 1.003233 GTTCCTCCTGCACCTCCAC 60.003 63.158 0.00 0.00 0.00 4.02
4808 5074 2.224159 GGTTCCTCCTGCACCTCCA 61.224 63.158 0.00 0.00 0.00 3.86
4809 5075 2.671682 GGTTCCTCCTGCACCTCC 59.328 66.667 0.00 0.00 0.00 4.30
4810 5076 1.779061 TTGGGTTCCTCCTGCACCTC 61.779 60.000 0.00 0.00 36.25 3.85
4811 5077 1.774217 TTGGGTTCCTCCTGCACCT 60.774 57.895 0.00 0.00 36.25 4.00
4812 5078 1.603739 GTTGGGTTCCTCCTGCACC 60.604 63.158 0.00 0.00 36.25 5.01
4813 5079 0.251341 ATGTTGGGTTCCTCCTGCAC 60.251 55.000 0.00 0.00 36.25 4.57
4814 5080 0.038166 GATGTTGGGTTCCTCCTGCA 59.962 55.000 0.00 0.00 36.25 4.41
4815 5081 0.038166 TGATGTTGGGTTCCTCCTGC 59.962 55.000 0.00 0.00 36.25 4.85
4816 5082 1.614317 GGTGATGTTGGGTTCCTCCTG 60.614 57.143 0.00 0.00 36.25 3.86
4817 5083 0.698818 GGTGATGTTGGGTTCCTCCT 59.301 55.000 0.00 0.00 36.25 3.69
4818 5084 0.323451 GGGTGATGTTGGGTTCCTCC 60.323 60.000 0.00 0.00 0.00 4.30
4819 5085 0.698818 AGGGTGATGTTGGGTTCCTC 59.301 55.000 0.00 0.00 0.00 3.71
4820 5086 1.158007 AAGGGTGATGTTGGGTTCCT 58.842 50.000 0.00 0.00 0.00 3.36
4821 5087 1.256812 CAAGGGTGATGTTGGGTTCC 58.743 55.000 0.00 0.00 0.00 3.62
4822 5088 0.603065 GCAAGGGTGATGTTGGGTTC 59.397 55.000 0.00 0.00 0.00 3.62
4823 5089 0.831711 GGCAAGGGTGATGTTGGGTT 60.832 55.000 0.00 0.00 0.00 4.11
4824 5090 1.228862 GGCAAGGGTGATGTTGGGT 60.229 57.895 0.00 0.00 0.00 4.51
4825 5091 1.984026 GGGCAAGGGTGATGTTGGG 60.984 63.158 0.00 0.00 0.00 4.12
4826 5092 2.342650 CGGGCAAGGGTGATGTTGG 61.343 63.158 0.00 0.00 0.00 3.77
4827 5093 2.342650 CCGGGCAAGGGTGATGTTG 61.343 63.158 0.00 0.00 0.00 3.33
4828 5094 2.035626 CCGGGCAAGGGTGATGTT 59.964 61.111 0.00 0.00 0.00 2.71
4829 5095 2.484287 CTTCCGGGCAAGGGTGATGT 62.484 60.000 0.00 0.00 0.00 3.06
4830 5096 1.750399 CTTCCGGGCAAGGGTGATG 60.750 63.158 0.00 0.00 0.00 3.07
4831 5097 1.281925 ATCTTCCGGGCAAGGGTGAT 61.282 55.000 0.00 1.09 0.00 3.06
4832 5098 1.910580 GATCTTCCGGGCAAGGGTGA 61.911 60.000 0.00 0.00 0.00 4.02
4833 5099 1.452108 GATCTTCCGGGCAAGGGTG 60.452 63.158 0.00 0.00 0.00 4.61
4834 5100 1.497309 TTGATCTTCCGGGCAAGGGT 61.497 55.000 0.00 0.00 0.00 4.34
4835 5101 1.032114 GTTGATCTTCCGGGCAAGGG 61.032 60.000 0.00 0.00 0.00 3.95
4836 5102 0.035056 AGTTGATCTTCCGGGCAAGG 60.035 55.000 0.00 0.00 0.00 3.61
4837 5103 1.470098 CAAGTTGATCTTCCGGGCAAG 59.530 52.381 0.00 0.00 33.63 4.01
4838 5104 1.533625 CAAGTTGATCTTCCGGGCAA 58.466 50.000 0.00 0.00 33.63 4.52
4839 5105 0.322456 CCAAGTTGATCTTCCGGGCA 60.322 55.000 3.87 0.00 33.63 5.36
4840 5106 1.657751 GCCAAGTTGATCTTCCGGGC 61.658 60.000 3.87 0.00 36.22 6.13
4841 5107 1.369091 CGCCAAGTTGATCTTCCGGG 61.369 60.000 3.87 0.00 33.63 5.73
4842 5108 0.391130 TCGCCAAGTTGATCTTCCGG 60.391 55.000 3.87 0.00 33.63 5.14
4843 5109 1.328680 CATCGCCAAGTTGATCTTCCG 59.671 52.381 3.87 0.00 33.63 4.30
4844 5110 1.064654 GCATCGCCAAGTTGATCTTCC 59.935 52.381 3.87 0.00 33.63 3.46
4845 5111 1.739466 TGCATCGCCAAGTTGATCTTC 59.261 47.619 3.87 0.00 33.63 2.87
4846 5112 1.741706 CTGCATCGCCAAGTTGATCTT 59.258 47.619 3.87 0.00 36.75 2.40
4847 5113 1.065926 TCTGCATCGCCAAGTTGATCT 60.066 47.619 3.87 0.00 0.00 2.75
4848 5114 1.372582 TCTGCATCGCCAAGTTGATC 58.627 50.000 3.87 0.00 0.00 2.92
4849 5115 1.825090 TTCTGCATCGCCAAGTTGAT 58.175 45.000 3.87 0.00 0.00 2.57
4850 5116 1.603456 TTTCTGCATCGCCAAGTTGA 58.397 45.000 3.87 0.00 0.00 3.18
4851 5117 2.420628 TTTTCTGCATCGCCAAGTTG 57.579 45.000 0.00 0.00 0.00 3.16
4852 5118 3.578688 GATTTTTCTGCATCGCCAAGTT 58.421 40.909 0.00 0.00 0.00 2.66
4853 5119 2.414559 CGATTTTTCTGCATCGCCAAGT 60.415 45.455 0.00 0.00 36.20 3.16
4854 5120 2.179589 CGATTTTTCTGCATCGCCAAG 58.820 47.619 0.00 0.00 36.20 3.61
4855 5121 2.261037 CGATTTTTCTGCATCGCCAA 57.739 45.000 0.00 0.00 36.20 4.52
4856 5122 3.994729 CGATTTTTCTGCATCGCCA 57.005 47.368 0.00 0.00 36.20 5.69
4859 5125 2.179589 CTTGGCGATTTTTCTGCATCG 58.820 47.619 0.85 0.85 44.24 3.84
4860 5126 3.174375 GACTTGGCGATTTTTCTGCATC 58.826 45.455 0.00 0.00 0.00 3.91
4861 5127 2.557924 TGACTTGGCGATTTTTCTGCAT 59.442 40.909 0.00 0.00 0.00 3.96
4862 5128 1.952990 TGACTTGGCGATTTTTCTGCA 59.047 42.857 0.00 0.00 0.00 4.41
4863 5129 2.704725 TGACTTGGCGATTTTTCTGC 57.295 45.000 0.00 0.00 0.00 4.26
4864 5130 3.426525 GCTTTGACTTGGCGATTTTTCTG 59.573 43.478 0.00 0.00 0.00 3.02
4865 5131 3.642705 GCTTTGACTTGGCGATTTTTCT 58.357 40.909 0.00 0.00 0.00 2.52
4874 5140 1.081175 GCCTTCGCTTTGACTTGGC 60.081 57.895 0.00 0.00 32.82 4.52
4875 5141 1.581447 GGCCTTCGCTTTGACTTGG 59.419 57.895 0.00 0.00 34.44 3.61
4876 5142 1.207593 CGGCCTTCGCTTTGACTTG 59.792 57.895 0.00 0.00 34.44 3.16
4877 5143 1.966451 CCGGCCTTCGCTTTGACTT 60.966 57.895 0.00 0.00 37.59 3.01
4878 5144 2.358737 CCGGCCTTCGCTTTGACT 60.359 61.111 0.00 0.00 37.59 3.41
4879 5145 1.512156 TTTCCGGCCTTCGCTTTGAC 61.512 55.000 0.00 0.00 37.59 3.18
4880 5146 1.228003 TTTCCGGCCTTCGCTTTGA 60.228 52.632 0.00 0.00 37.59 2.69
4881 5147 1.210155 CTTTCCGGCCTTCGCTTTG 59.790 57.895 0.00 0.00 37.59 2.77
4882 5148 1.971695 CCTTTCCGGCCTTCGCTTT 60.972 57.895 0.00 0.00 37.59 3.51
4883 5149 2.359975 CCTTTCCGGCCTTCGCTT 60.360 61.111 0.00 0.00 37.59 4.68
4884 5150 3.316573 CTCCTTTCCGGCCTTCGCT 62.317 63.158 0.00 0.00 37.59 4.93
4885 5151 2.820037 CTCCTTTCCGGCCTTCGC 60.820 66.667 0.00 0.00 37.59 4.70
4886 5152 2.125106 CCTCCTTTCCGGCCTTCG 60.125 66.667 0.00 0.00 38.88 3.79
4887 5153 1.848886 TTCCCTCCTTTCCGGCCTTC 61.849 60.000 0.00 0.00 0.00 3.46
4888 5154 1.432023 TTTCCCTCCTTTCCGGCCTT 61.432 55.000 0.00 0.00 0.00 4.35
4889 5155 1.850755 TTTCCCTCCTTTCCGGCCT 60.851 57.895 0.00 0.00 0.00 5.19
4890 5156 1.378646 CTTTCCCTCCTTTCCGGCC 60.379 63.158 0.00 0.00 0.00 6.13
4891 5157 2.046864 GCTTTCCCTCCTTTCCGGC 61.047 63.158 0.00 0.00 0.00 6.13
4892 5158 0.393132 GAGCTTTCCCTCCTTTCCGG 60.393 60.000 0.00 0.00 0.00 5.14
4893 5159 0.324943 TGAGCTTTCCCTCCTTTCCG 59.675 55.000 0.00 0.00 0.00 4.30
4894 5160 1.340502 CCTGAGCTTTCCCTCCTTTCC 60.341 57.143 0.00 0.00 0.00 3.13
4895 5161 1.630878 TCCTGAGCTTTCCCTCCTTTC 59.369 52.381 0.00 0.00 0.00 2.62
4896 5162 1.747444 TCCTGAGCTTTCCCTCCTTT 58.253 50.000 0.00 0.00 0.00 3.11
4897 5163 1.632920 CTTCCTGAGCTTTCCCTCCTT 59.367 52.381 0.00 0.00 0.00 3.36
4898 5164 1.284313 CTTCCTGAGCTTTCCCTCCT 58.716 55.000 0.00 0.00 0.00 3.69
4899 5165 3.871701 CTTCCTGAGCTTTCCCTCC 57.128 57.895 0.00 0.00 0.00 4.30
4909 5175 1.746991 GGCCTTTCCGCTTCCTGAG 60.747 63.158 0.00 0.00 0.00 3.35
4910 5176 2.351276 GGCCTTTCCGCTTCCTGA 59.649 61.111 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.