Multiple sequence alignment - TraesCS2B01G534700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G534700 chr2B 100.000 4459 0 0 1 4459 730995109 730999567 0.000000e+00 8235.0
1 TraesCS2B01G534700 chr2B 84.103 195 18 7 3630 3815 64195662 64195852 4.580000e-40 176.0
2 TraesCS2B01G534700 chr2A 87.753 988 77 22 2676 3630 734345845 734346821 0.000000e+00 1114.0
3 TraesCS2B01G534700 chr2A 91.173 827 52 10 956 1771 734343814 734344630 0.000000e+00 1103.0
4 TraesCS2B01G534700 chr2A 87.324 71 9 0 2238 2308 734345228 734345298 1.030000e-11 82.4
5 TraesCS2B01G534700 chr5B 89.357 855 83 7 1 851 128370907 128370057 0.000000e+00 1068.0
6 TraesCS2B01G534700 chr5B 89.290 859 81 10 1 854 490109043 490108191 0.000000e+00 1066.0
7 TraesCS2B01G534700 chr5B 87.024 840 94 12 1 830 623014782 623015616 0.000000e+00 933.0
8 TraesCS2B01G534700 chr5B 87.109 512 41 9 3629 4119 412240059 412240566 1.400000e-154 556.0
9 TraesCS2B01G534700 chr5B 85.122 531 35 12 3629 4119 439381884 439381358 1.850000e-138 503.0
10 TraesCS2B01G534700 chr5B 89.895 287 20 4 4109 4394 439381095 439380817 1.180000e-95 361.0
11 TraesCS2B01G534700 chr5B 89.547 287 22 3 4109 4394 412240829 412241108 1.530000e-94 357.0
12 TraesCS2B01G534700 chr7D 88.065 863 93 9 1 856 178118534 178117675 0.000000e+00 1014.0
13 TraesCS2B01G534700 chr7D 87.262 840 87 10 1 823 175703997 175703161 0.000000e+00 941.0
14 TraesCS2B01G534700 chr2D 86.354 938 80 22 2676 3575 600974648 600975575 0.000000e+00 979.0
15 TraesCS2B01G534700 chr2D 88.228 841 64 20 956 1771 600972627 600973457 0.000000e+00 972.0
16 TraesCS2B01G534700 chrUn 86.967 867 97 7 1 853 114237262 114236398 0.000000e+00 961.0
17 TraesCS2B01G534700 chr3D 88.845 762 69 9 1 751 391241508 391240752 0.000000e+00 922.0
18 TraesCS2B01G534700 chr3D 80.531 113 18 4 742 851 12551185 12551296 2.860000e-12 84.2
19 TraesCS2B01G534700 chr1D 87.468 790 93 5 1 787 354461950 354461164 0.000000e+00 905.0
20 TraesCS2B01G534700 chr6B 85.714 861 105 16 1 851 683982502 683981650 0.000000e+00 893.0
21 TraesCS2B01G534700 chr7B 87.695 512 38 9 3629 4119 116752167 116751660 1.390000e-159 573.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G534700 chr2B 730995109 730999567 4458 False 8235.000000 8235 100.0000 1 4459 1 chr2B.!!$F2 4458
1 TraesCS2B01G534700 chr2A 734343814 734346821 3007 False 766.466667 1114 88.7500 956 3630 3 chr2A.!!$F1 2674
2 TraesCS2B01G534700 chr5B 128370057 128370907 850 True 1068.000000 1068 89.3570 1 851 1 chr5B.!!$R1 850
3 TraesCS2B01G534700 chr5B 490108191 490109043 852 True 1066.000000 1066 89.2900 1 854 1 chr5B.!!$R2 853
4 TraesCS2B01G534700 chr5B 623014782 623015616 834 False 933.000000 933 87.0240 1 830 1 chr5B.!!$F1 829
5 TraesCS2B01G534700 chr5B 412240059 412241108 1049 False 456.500000 556 88.3280 3629 4394 2 chr5B.!!$F2 765
6 TraesCS2B01G534700 chr5B 439380817 439381884 1067 True 432.000000 503 87.5085 3629 4394 2 chr5B.!!$R3 765
7 TraesCS2B01G534700 chr7D 178117675 178118534 859 True 1014.000000 1014 88.0650 1 856 1 chr7D.!!$R2 855
8 TraesCS2B01G534700 chr7D 175703161 175703997 836 True 941.000000 941 87.2620 1 823 1 chr7D.!!$R1 822
9 TraesCS2B01G534700 chr2D 600972627 600975575 2948 False 975.500000 979 87.2910 956 3575 2 chr2D.!!$F1 2619
10 TraesCS2B01G534700 chrUn 114236398 114237262 864 True 961.000000 961 86.9670 1 853 1 chrUn.!!$R1 852
11 TraesCS2B01G534700 chr3D 391240752 391241508 756 True 922.000000 922 88.8450 1 751 1 chr3D.!!$R1 750
12 TraesCS2B01G534700 chr1D 354461164 354461950 786 True 905.000000 905 87.4680 1 787 1 chr1D.!!$R1 786
13 TraesCS2B01G534700 chr6B 683981650 683982502 852 True 893.000000 893 85.7140 1 851 1 chr6B.!!$R1 850
14 TraesCS2B01G534700 chr7B 116751660 116752167 507 True 573.000000 573 87.6950 3629 4119 1 chr7B.!!$R1 490

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
947 979 0.101579 CGTCACAACCCAAACAACCC 59.898 55.0 0.00 0.0 0.00 4.11 F
1488 1536 0.030504 TGCAGATGCGTTGTGTTTGG 59.969 50.0 0.00 0.0 45.83 3.28 F
1871 2005 0.034863 TAGTGAAAATGGGGCCCGAC 60.035 55.0 19.83 2.7 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2236 2376 0.405585 AGTACAGCCCAAACTGCCAT 59.594 50.0 0.0 0.0 41.6 4.40 R
3199 3660 0.106918 AAAGAAGGGACACAACGCCA 60.107 50.0 0.0 0.0 0.0 5.69 R
3741 4218 0.035317 AGATCAAGACCTGCACGCAA 59.965 50.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 1.889829 CTCCTCCAGTGAACTTCGAGT 59.110 52.381 0.00 0.00 0.00 4.18
69 70 2.354303 CGGCACTACAACAAGGGATACA 60.354 50.000 0.00 0.00 39.74 2.29
94 95 5.536538 ACCTAGCAGATGACATCTATTCGAA 59.463 40.000 17.54 0.00 37.58 3.71
96 97 7.095910 CCTAGCAGATGACATCTATTCGAAAT 58.904 38.462 17.54 1.47 37.58 2.17
104 105 6.356556 TGACATCTATTCGAAATTGGTCCAT 58.643 36.000 0.00 0.00 0.00 3.41
114 115 7.220741 TCGAAATTGGTCCATATTTGTGAAA 57.779 32.000 13.47 0.00 0.00 2.69
176 177 0.606673 GCGAAGGTTCAGGAGGCTTT 60.607 55.000 0.00 0.00 0.00 3.51
195 196 1.219124 GCAGGAAGGATGTCGAGCA 59.781 57.895 0.00 0.00 0.00 4.26
196 197 0.391661 GCAGGAAGGATGTCGAGCAA 60.392 55.000 0.00 0.00 0.00 3.91
219 220 1.689984 TTTGGTGTGCTGCAATCTCA 58.310 45.000 2.77 0.00 0.00 3.27
232 233 5.006941 GCTGCAATCTCAATTTGTTGTTGTT 59.993 36.000 0.00 0.00 0.00 2.83
271 274 5.139727 ACCTGGTTGAAAGATCAAATGTGA 58.860 37.500 0.00 0.00 46.66 3.58
287 290 3.257469 TGTGAGAGATCATGACTTGCC 57.743 47.619 0.00 0.00 0.00 4.52
346 356 3.308117 AGGAAGAACCAGTGTTTGACACA 60.308 43.478 13.09 0.00 44.00 3.72
389 399 2.553904 CCTCTTGCCCAAGTTGATCACT 60.554 50.000 3.87 0.00 39.38 3.41
395 405 3.118629 TGCCCAAGTTGATCACTAGCTAG 60.119 47.826 19.44 19.44 32.94 3.42
411 421 1.888436 CTAGCGGCAACCTGGACTGA 61.888 60.000 0.00 0.00 0.00 3.41
505 516 0.548031 TATGGAGGCTCAAGGGCAAG 59.452 55.000 17.69 0.00 43.56 4.01
507 518 2.606587 GGAGGCTCAAGGGCAAGGA 61.607 63.158 17.69 0.00 43.56 3.36
639 653 2.823196 TATGTTGAATTTGCGCCGAG 57.177 45.000 4.18 0.00 0.00 4.63
705 723 3.385193 CCGAAATTGGGCTGAAAAGTT 57.615 42.857 0.00 0.00 0.00 2.66
716 734 3.627123 GGCTGAAAAGTTGGCAAATTTGT 59.373 39.130 24.16 14.83 0.00 2.83
797 827 1.444836 CCGATTTTAGCACCGGTTCA 58.555 50.000 2.97 0.00 37.40 3.18
800 830 2.433436 GATTTTAGCACCGGTTCACCT 58.567 47.619 2.97 1.21 0.00 4.00
803 834 0.981183 TTAGCACCGGTTCACCTCAT 59.019 50.000 2.97 0.00 0.00 2.90
856 888 5.171339 ACAACTGGAGATGCTCTAACAAT 57.829 39.130 0.00 0.00 0.00 2.71
857 889 5.564550 ACAACTGGAGATGCTCTAACAATT 58.435 37.500 0.00 0.00 0.00 2.32
858 890 6.006449 ACAACTGGAGATGCTCTAACAATTT 58.994 36.000 0.00 0.00 0.00 1.82
859 891 7.168219 ACAACTGGAGATGCTCTAACAATTTA 58.832 34.615 0.00 0.00 0.00 1.40
860 892 7.665559 ACAACTGGAGATGCTCTAACAATTTAA 59.334 33.333 0.00 0.00 0.00 1.52
861 893 7.856145 ACTGGAGATGCTCTAACAATTTAAG 57.144 36.000 0.00 0.00 0.00 1.85
862 894 6.317391 ACTGGAGATGCTCTAACAATTTAAGC 59.683 38.462 0.00 0.00 0.00 3.09
863 895 6.179756 TGGAGATGCTCTAACAATTTAAGCA 58.820 36.000 0.00 0.00 46.04 3.91
864 896 6.658816 TGGAGATGCTCTAACAATTTAAGCAA 59.341 34.615 0.00 0.00 45.22 3.91
865 897 6.969473 GGAGATGCTCTAACAATTTAAGCAAC 59.031 38.462 0.00 0.00 45.22 4.17
866 898 7.148171 GGAGATGCTCTAACAATTTAAGCAACT 60.148 37.037 5.31 5.31 45.20 3.16
867 899 7.756558 AGATGCTCTAACAATTTAAGCAACTC 58.243 34.615 0.00 0.00 45.22 3.01
868 900 6.875948 TGCTCTAACAATTTAAGCAACTCA 57.124 33.333 0.00 0.00 39.83 3.41
869 901 7.270757 TGCTCTAACAATTTAAGCAACTCAA 57.729 32.000 0.00 0.00 39.83 3.02
870 902 7.362662 TGCTCTAACAATTTAAGCAACTCAAG 58.637 34.615 0.00 0.00 39.83 3.02
871 903 7.013274 TGCTCTAACAATTTAAGCAACTCAAGT 59.987 33.333 0.00 0.00 39.83 3.16
872 904 8.504005 GCTCTAACAATTTAAGCAACTCAAGTA 58.496 33.333 0.00 0.00 33.21 2.24
875 907 9.559958 CTAACAATTTAAGCAACTCAAGTATGG 57.440 33.333 0.00 0.00 0.00 2.74
876 908 6.389906 ACAATTTAAGCAACTCAAGTATGGC 58.610 36.000 0.00 0.00 0.00 4.40
877 909 6.015519 ACAATTTAAGCAACTCAAGTATGGCA 60.016 34.615 0.00 0.00 0.00 4.92
878 910 6.588719 ATTTAAGCAACTCAAGTATGGCAA 57.411 33.333 0.00 0.00 0.00 4.52
879 911 6.398234 TTTAAGCAACTCAAGTATGGCAAA 57.602 33.333 0.00 0.00 0.00 3.68
880 912 6.588719 TTAAGCAACTCAAGTATGGCAAAT 57.411 33.333 0.00 0.00 0.00 2.32
881 913 4.445452 AGCAACTCAAGTATGGCAAATG 57.555 40.909 0.00 0.00 0.00 2.32
882 914 3.828451 AGCAACTCAAGTATGGCAAATGT 59.172 39.130 0.00 0.00 0.00 2.71
883 915 3.922240 GCAACTCAAGTATGGCAAATGTG 59.078 43.478 0.00 0.00 0.00 3.21
884 916 4.321156 GCAACTCAAGTATGGCAAATGTGA 60.321 41.667 0.00 0.00 0.00 3.58
885 917 5.156355 CAACTCAAGTATGGCAAATGTGAC 58.844 41.667 0.00 0.00 0.00 3.67
898 930 8.893219 TGGCAAATGTGACAAATATAACAAAA 57.107 26.923 0.00 0.00 40.96 2.44
899 931 9.330063 TGGCAAATGTGACAAATATAACAAAAA 57.670 25.926 0.00 0.00 40.96 1.94
908 940 9.149225 TGACAAATATAACAAAAATCATGTGGC 57.851 29.630 0.00 0.00 0.00 5.01
909 941 9.149225 GACAAATATAACAAAAATCATGTGGCA 57.851 29.630 0.00 0.00 0.00 4.92
910 942 9.499479 ACAAATATAACAAAAATCATGTGGCAA 57.501 25.926 0.00 0.00 0.00 4.52
913 945 9.669887 AATATAACAAAAATCATGTGGCAATGT 57.330 25.926 0.00 0.00 0.00 2.71
916 948 6.971527 ACAAAAATCATGTGGCAATGTATG 57.028 33.333 0.00 0.00 0.00 2.39
917 949 5.875910 ACAAAAATCATGTGGCAATGTATGG 59.124 36.000 0.00 0.00 0.00 2.74
930 962 5.762045 GCAATGTATGGCAAAGATAATCGT 58.238 37.500 0.00 0.00 0.00 3.73
931 963 5.853282 GCAATGTATGGCAAAGATAATCGTC 59.147 40.000 0.00 0.00 0.00 4.20
932 964 6.513230 GCAATGTATGGCAAAGATAATCGTCA 60.513 38.462 0.00 0.00 0.00 4.35
933 965 5.984233 TGTATGGCAAAGATAATCGTCAC 57.016 39.130 0.00 0.00 0.00 3.67
934 966 5.423886 TGTATGGCAAAGATAATCGTCACA 58.576 37.500 0.00 0.00 0.00 3.58
935 967 5.877564 TGTATGGCAAAGATAATCGTCACAA 59.122 36.000 0.00 0.00 0.00 3.33
936 968 4.678509 TGGCAAAGATAATCGTCACAAC 57.321 40.909 0.00 0.00 0.00 3.32
937 969 3.438781 TGGCAAAGATAATCGTCACAACC 59.561 43.478 0.00 0.00 0.00 3.77
938 970 3.181500 GGCAAAGATAATCGTCACAACCC 60.181 47.826 0.00 0.00 0.00 4.11
939 971 3.438781 GCAAAGATAATCGTCACAACCCA 59.561 43.478 0.00 0.00 0.00 4.51
940 972 4.083003 GCAAAGATAATCGTCACAACCCAA 60.083 41.667 0.00 0.00 0.00 4.12
941 973 5.563867 GCAAAGATAATCGTCACAACCCAAA 60.564 40.000 0.00 0.00 0.00 3.28
942 974 5.622770 AAGATAATCGTCACAACCCAAAC 57.377 39.130 0.00 0.00 0.00 2.93
943 975 4.647611 AGATAATCGTCACAACCCAAACA 58.352 39.130 0.00 0.00 0.00 2.83
944 976 5.067273 AGATAATCGTCACAACCCAAACAA 58.933 37.500 0.00 0.00 0.00 2.83
945 977 3.430333 AATCGTCACAACCCAAACAAC 57.570 42.857 0.00 0.00 0.00 3.32
946 978 1.096416 TCGTCACAACCCAAACAACC 58.904 50.000 0.00 0.00 0.00 3.77
947 979 0.101579 CGTCACAACCCAAACAACCC 59.898 55.000 0.00 0.00 0.00 4.11
948 980 1.480789 GTCACAACCCAAACAACCCT 58.519 50.000 0.00 0.00 0.00 4.34
949 981 1.828595 GTCACAACCCAAACAACCCTT 59.171 47.619 0.00 0.00 0.00 3.95
950 982 3.025262 GTCACAACCCAAACAACCCTTA 58.975 45.455 0.00 0.00 0.00 2.69
951 983 3.447944 GTCACAACCCAAACAACCCTTAA 59.552 43.478 0.00 0.00 0.00 1.85
952 984 3.702045 TCACAACCCAAACAACCCTTAAG 59.298 43.478 0.00 0.00 0.00 1.85
953 985 3.449377 CACAACCCAAACAACCCTTAAGT 59.551 43.478 0.97 0.00 0.00 2.24
954 986 3.449377 ACAACCCAAACAACCCTTAAGTG 59.551 43.478 0.97 0.00 0.00 3.16
960 992 3.306472 AACAACCCTTAAGTGCCAAGA 57.694 42.857 0.97 0.00 0.00 3.02
972 1004 3.566210 CCAAGACCCCACCCACGT 61.566 66.667 0.00 0.00 0.00 4.49
1003 1036 1.077625 CACCCGGAAAATCCCCCAA 59.922 57.895 0.73 0.00 31.13 4.12
1004 1037 0.325203 CACCCGGAAAATCCCCCAAT 60.325 55.000 0.73 0.00 31.13 3.16
1005 1038 0.032515 ACCCGGAAAATCCCCCAATC 60.033 55.000 0.73 0.00 31.13 2.67
1007 1040 1.106944 CCGGAAAATCCCCCAATCGG 61.107 60.000 0.00 0.00 31.13 4.18
1008 1041 0.395173 CGGAAAATCCCCCAATCGGT 60.395 55.000 0.00 0.00 31.13 4.69
1025 1062 0.537188 GGTCCATCACATCACCGAGT 59.463 55.000 0.00 0.00 0.00 4.18
1032 1069 1.623311 TCACATCACCGAGTTCACCAT 59.377 47.619 0.00 0.00 0.00 3.55
1317 1354 3.866582 GGTGCGGGATCTGGGAGG 61.867 72.222 0.00 0.00 0.00 4.30
1370 1407 4.862823 GGACGAGGGGGAGGAGGG 62.863 77.778 0.00 0.00 0.00 4.30
1383 1420 2.079288 GGAGGGGAAGATGGGGGAC 61.079 68.421 0.00 0.00 0.00 4.46
1453 1494 1.077716 GGTAGCGCCACCTCCATTT 60.078 57.895 18.37 0.00 35.55 2.32
1482 1530 1.660607 CGATAAGTGCAGATGCGTTGT 59.339 47.619 0.00 0.00 45.83 3.32
1488 1536 0.030504 TGCAGATGCGTTGTGTTTGG 59.969 50.000 0.00 0.00 45.83 3.28
1614 1662 1.478105 GGTCAAATGGCAGAATGGACC 59.522 52.381 8.11 8.11 36.86 4.46
1618 1666 1.315257 AATGGCAGAATGGACCGTGC 61.315 55.000 0.00 0.00 35.86 5.34
1641 1689 4.828939 CCATCCTGGCATTTTTAGCTGATA 59.171 41.667 0.00 0.00 0.00 2.15
1642 1690 5.302568 CCATCCTGGCATTTTTAGCTGATAA 59.697 40.000 0.00 0.00 0.00 1.75
1664 1712 8.808240 ATAACTAGTGGATTATCCCCAGTTTA 57.192 34.615 19.89 9.52 38.28 2.01
1670 1718 8.996651 AGTGGATTATCCCCAGTTTATTAAAG 57.003 34.615 8.98 0.00 35.03 1.85
1676 1724 5.249780 TCCCCAGTTTATTAAAGCACTCA 57.750 39.130 0.00 0.00 0.00 3.41
1718 1766 7.639113 TTAGGCAAGATTACACCTTTTATGG 57.361 36.000 0.00 0.00 33.60 2.74
1719 1767 5.826643 AGGCAAGATTACACCTTTTATGGA 58.173 37.500 0.00 0.00 0.00 3.41
1720 1768 5.888161 AGGCAAGATTACACCTTTTATGGAG 59.112 40.000 0.00 0.00 0.00 3.86
1721 1769 5.652452 GGCAAGATTACACCTTTTATGGAGT 59.348 40.000 0.00 0.00 35.24 3.85
1722 1770 6.826741 GGCAAGATTACACCTTTTATGGAGTA 59.173 38.462 0.00 0.00 33.21 2.59
1723 1771 7.201705 GGCAAGATTACACCTTTTATGGAGTAC 60.202 40.741 0.00 0.00 33.95 2.73
1724 1772 7.335924 GCAAGATTACACCTTTTATGGAGTACA 59.664 37.037 0.00 0.00 33.95 2.90
1770 1830 7.964604 AGTAGTCTTTAGTAGTTGCTTTTGG 57.035 36.000 0.00 0.00 0.00 3.28
1771 1831 5.690997 AGTCTTTAGTAGTTGCTTTTGGC 57.309 39.130 0.00 0.00 42.22 4.52
1772 1832 5.377478 AGTCTTTAGTAGTTGCTTTTGGCT 58.623 37.500 0.00 0.00 42.39 4.75
1773 1833 5.239525 AGTCTTTAGTAGTTGCTTTTGGCTG 59.760 40.000 0.00 0.00 42.39 4.85
1774 1834 5.238650 GTCTTTAGTAGTTGCTTTTGGCTGA 59.761 40.000 0.00 0.00 42.39 4.26
1775 1835 5.470098 TCTTTAGTAGTTGCTTTTGGCTGAG 59.530 40.000 0.00 0.00 42.39 3.35
1776 1836 2.508526 AGTAGTTGCTTTTGGCTGAGG 58.491 47.619 0.00 0.00 42.39 3.86
1777 1837 1.068264 GTAGTTGCTTTTGGCTGAGGC 60.068 52.381 0.00 0.00 42.39 4.70
1778 1838 0.756442 AGTTGCTTTTGGCTGAGGCA 60.756 50.000 3.93 3.93 42.39 4.75
1779 1839 0.319405 GTTGCTTTTGGCTGAGGCAT 59.681 50.000 10.27 0.00 42.39 4.40
1780 1840 0.604578 TTGCTTTTGGCTGAGGCATC 59.395 50.000 10.27 0.43 42.39 3.91
1781 1841 1.252904 TGCTTTTGGCTGAGGCATCC 61.253 55.000 10.27 0.00 42.39 3.51
1782 1842 1.953231 GCTTTTGGCTGAGGCATCCC 61.953 60.000 10.27 0.00 38.08 3.85
1783 1843 0.612732 CTTTTGGCTGAGGCATCCCA 60.613 55.000 10.27 0.00 38.08 4.37
1784 1844 0.041535 TTTTGGCTGAGGCATCCCAT 59.958 50.000 10.27 0.00 38.08 4.00
1785 1845 0.685131 TTTGGCTGAGGCATCCCATG 60.685 55.000 10.27 0.00 38.08 3.66
1786 1846 1.573607 TTGGCTGAGGCATCCCATGA 61.574 55.000 10.27 0.00 38.08 3.07
1787 1847 1.358051 TGGCTGAGGCATCCCATGAT 61.358 55.000 3.93 0.00 40.87 2.45
1788 1848 0.694771 GGCTGAGGCATCCCATGATA 59.305 55.000 0.00 0.00 40.87 2.15
1789 1849 1.284198 GGCTGAGGCATCCCATGATAT 59.716 52.381 0.00 0.00 40.87 1.63
1808 1868 3.508845 ATGGTTGTATATCAGGGGTGC 57.491 47.619 0.00 0.00 0.00 5.01
1813 1873 3.558931 TGTATATCAGGGGTGCAAGTG 57.441 47.619 0.00 0.00 0.00 3.16
1814 1874 3.111484 TGTATATCAGGGGTGCAAGTGA 58.889 45.455 0.00 0.00 0.00 3.41
1815 1875 3.716353 TGTATATCAGGGGTGCAAGTGAT 59.284 43.478 0.00 0.00 34.11 3.06
1816 1876 2.715749 TATCAGGGGTGCAAGTGATG 57.284 50.000 10.20 0.00 32.01 3.07
1817 1877 0.994247 ATCAGGGGTGCAAGTGATGA 59.006 50.000 0.00 0.00 0.00 2.92
1818 1878 0.994247 TCAGGGGTGCAAGTGATGAT 59.006 50.000 0.00 0.00 0.00 2.45
1839 1971 6.894682 TGATATGCTCCCAGTATTGTGTAAA 58.105 36.000 0.00 0.00 0.00 2.01
1846 1978 5.310451 TCCCAGTATTGTGTAAAACTCCAC 58.690 41.667 0.00 0.00 0.00 4.02
1869 2003 1.102978 CTTAGTGAAAATGGGGCCCG 58.897 55.000 19.83 0.00 0.00 6.13
1871 2005 0.034863 TAGTGAAAATGGGGCCCGAC 60.035 55.000 19.83 2.70 0.00 4.79
1873 2007 1.304052 TGAAAATGGGGCCCGACAG 60.304 57.895 19.83 0.00 0.00 3.51
1874 2008 1.001393 GAAAATGGGGCCCGACAGA 60.001 57.895 19.83 0.00 0.00 3.41
1885 2019 1.041437 CCCGACAGACCCCTCTTATC 58.959 60.000 0.00 0.00 0.00 1.75
1893 2032 6.163135 ACAGACCCCTCTTATCGAAAATAG 57.837 41.667 0.00 0.00 0.00 1.73
1899 2038 9.857957 GACCCCTCTTATCGAAAATAGTAATAG 57.142 37.037 0.00 0.00 0.00 1.73
1900 2039 8.312564 ACCCCTCTTATCGAAAATAGTAATAGC 58.687 37.037 0.00 0.00 0.00 2.97
1925 2064 9.807649 GCAATCAAGGTAATGAACTTATTTGAT 57.192 29.630 6.25 0.00 37.70 2.57
1954 2093 6.015180 ACAGTGATTAAAACTGACATGCCAAT 60.015 34.615 21.98 1.14 46.55 3.16
1964 2103 4.826733 ACTGACATGCCAATTGTAGAAACA 59.173 37.500 4.43 0.00 0.00 2.83
1978 2117 1.981495 AGAAACAAGTAGGCAGGCTCT 59.019 47.619 0.00 0.00 0.00 4.09
1987 2126 1.352083 AGGCAGGCTCTTCAACACTA 58.648 50.000 0.00 0.00 0.00 2.74
2012 2151 5.707764 GCTTGATTACTCTGTTCCTCCTTTT 59.292 40.000 0.00 0.00 0.00 2.27
2028 2167 9.866655 TTCCTCCTTTTATCATAGCAACAATAT 57.133 29.630 0.00 0.00 0.00 1.28
2041 2180 8.839343 CATAGCAACAATATAACTTGGATGTGA 58.161 33.333 0.00 0.00 0.00 3.58
2053 2192 6.839124 ACTTGGATGTGATCAGCAAATTTA 57.161 33.333 0.00 0.00 0.00 1.40
2055 2194 5.233957 TGGATGTGATCAGCAAATTTACG 57.766 39.130 0.00 0.00 0.00 3.18
2061 2200 6.545508 TGTGATCAGCAAATTTACGAAGATG 58.454 36.000 0.00 0.00 0.00 2.90
2071 2210 7.319646 CAAATTTACGAAGATGGAAATTGGGA 58.680 34.615 0.00 0.00 33.07 4.37
2075 2214 3.203040 ACGAAGATGGAAATTGGGATCCT 59.797 43.478 12.58 0.00 36.64 3.24
2078 2217 5.221126 CGAAGATGGAAATTGGGATCCTTTC 60.221 44.000 12.58 13.40 36.64 2.62
2100 2239 6.442513 TCTATATGTGTCATAGGATGCTCG 57.557 41.667 0.00 0.00 0.00 5.03
2112 2251 2.171448 AGGATGCTCGTCTGGCTTTATT 59.829 45.455 0.00 0.00 0.00 1.40
2113 2252 3.388024 AGGATGCTCGTCTGGCTTTATTA 59.612 43.478 0.00 0.00 0.00 0.98
2116 2255 5.932303 GGATGCTCGTCTGGCTTTATTATAA 59.068 40.000 0.00 0.00 0.00 0.98
2117 2256 6.595716 GGATGCTCGTCTGGCTTTATTATAAT 59.404 38.462 2.97 2.97 0.00 1.28
2118 2257 7.764443 GGATGCTCGTCTGGCTTTATTATAATA 59.236 37.037 0.81 0.81 0.00 0.98
2119 2258 9.319143 GATGCTCGTCTGGCTTTATTATAATAT 57.681 33.333 6.01 0.00 0.00 1.28
2142 2282 1.771854 TGGACTGTTAAGTGCCCTCAA 59.228 47.619 0.00 0.00 43.75 3.02
2143 2283 2.173782 TGGACTGTTAAGTGCCCTCAAA 59.826 45.455 0.00 0.00 43.75 2.69
2155 2295 3.761752 GTGCCCTCAAATAAAGGCTTACA 59.238 43.478 0.00 0.00 45.94 2.41
2175 2315 2.051334 AACAAAGCACAGTGTAGGCA 57.949 45.000 8.17 0.00 0.00 4.75
2176 2316 1.597742 ACAAAGCACAGTGTAGGCAG 58.402 50.000 8.17 1.03 0.00 4.85
2180 2320 0.979665 AGCACAGTGTAGGCAGTCAT 59.020 50.000 8.17 0.00 0.00 3.06
2199 2339 3.651423 TCATGAGCATCCAGATCCAGATT 59.349 43.478 0.00 0.00 0.00 2.40
2200 2340 3.487120 TGAGCATCCAGATCCAGATTG 57.513 47.619 0.00 0.00 0.00 2.67
2222 2362 4.237724 GGAAACAAGTGCTTGGCTTTATC 58.762 43.478 15.31 5.15 44.45 1.75
2225 2365 2.821969 ACAAGTGCTTGGCTTTATCCAG 59.178 45.455 15.31 0.00 44.45 3.86
2226 2366 3.084039 CAAGTGCTTGGCTTTATCCAGA 58.916 45.455 4.13 0.00 37.44 3.86
2227 2367 3.659183 AGTGCTTGGCTTTATCCAGAT 57.341 42.857 0.00 0.00 37.44 2.90
2228 2368 3.549794 AGTGCTTGGCTTTATCCAGATC 58.450 45.455 0.00 0.00 37.44 2.75
2229 2369 2.620585 GTGCTTGGCTTTATCCAGATCC 59.379 50.000 0.00 0.00 37.44 3.36
2232 2372 3.434167 GCTTGGCTTTATCCAGATCCAGA 60.434 47.826 0.00 0.00 37.44 3.86
2233 2373 4.749166 GCTTGGCTTTATCCAGATCCAGAT 60.749 45.833 1.13 1.13 37.44 2.90
2234 2374 5.513788 GCTTGGCTTTATCCAGATCCAGATA 60.514 44.000 0.00 0.00 37.44 1.98
2236 2376 6.514012 TGGCTTTATCCAGATCCAGATAAA 57.486 37.500 19.22 19.22 40.76 1.40
2243 2460 3.718434 TCCAGATCCAGATAAATGGCAGT 59.282 43.478 0.00 0.00 40.41 4.40
2273 2490 5.724328 TGTACTTTGCCACAATTGTTTGAA 58.276 33.333 8.77 0.00 36.64 2.69
2275 2492 4.573900 ACTTTGCCACAATTGTTTGAACA 58.426 34.783 8.77 0.09 36.64 3.18
2292 2509 4.957296 TGAACACTTGACTCTCCCTTTAC 58.043 43.478 0.00 0.00 0.00 2.01
2299 2516 3.499338 TGACTCTCCCTTTACGGTGTTA 58.501 45.455 0.00 0.00 0.00 2.41
2302 2519 5.082251 ACTCTCCCTTTACGGTGTTATTC 57.918 43.478 0.00 0.00 0.00 1.75
2311 2723 7.706179 CCCTTTACGGTGTTATTCGTTATCTTA 59.294 37.037 0.00 0.00 40.31 2.10
2314 2726 5.653507 ACGGTGTTATTCGTTATCTTAGCA 58.346 37.500 0.00 0.00 36.04 3.49
2327 2739 9.320352 TCGTTATCTTAGCAATTGCATAAACTA 57.680 29.630 30.89 11.62 45.16 2.24
2328 2740 9.586150 CGTTATCTTAGCAATTGCATAAACTAG 57.414 33.333 30.89 15.90 45.16 2.57
2329 2741 9.884465 GTTATCTTAGCAATTGCATAAACTAGG 57.116 33.333 30.89 14.21 45.16 3.02
2330 2742 9.845740 TTATCTTAGCAATTGCATAAACTAGGA 57.154 29.630 30.89 18.55 45.16 2.94
2348 2760 1.210478 GGAAGTAGGCAGGCTCATCAA 59.790 52.381 0.00 0.00 0.00 2.57
2351 2763 1.065854 AGTAGGCAGGCTCATCAACAC 60.066 52.381 0.00 0.00 0.00 3.32
2352 2764 1.065854 GTAGGCAGGCTCATCAACACT 60.066 52.381 0.00 0.00 0.00 3.55
2400 2816 4.020573 TCAGAGCGAAAAATAGAACTGGGA 60.021 41.667 0.00 0.00 0.00 4.37
2413 2829 2.814805 ACTGGGATGTGCTTAGCAAT 57.185 45.000 9.05 5.03 41.47 3.56
2415 2831 3.019564 ACTGGGATGTGCTTAGCAATTC 58.980 45.455 9.05 8.75 41.47 2.17
2425 2841 5.140177 GTGCTTAGCAATTCGCATGTATAC 58.860 41.667 9.05 0.00 46.13 1.47
2430 2846 8.015087 GCTTAGCAATTCGCATGTATACAAATA 58.985 33.333 10.14 0.00 46.13 1.40
2456 2872 3.817647 GCCTTTCTGTGTGTCTCAGAATT 59.182 43.478 12.68 0.00 46.59 2.17
2457 2873 4.276926 GCCTTTCTGTGTGTCTCAGAATTT 59.723 41.667 12.68 0.00 46.59 1.82
2460 2876 5.657470 TTCTGTGTGTCTCAGAATTTTCG 57.343 39.130 9.26 0.00 43.88 3.46
2467 2883 6.200286 GTGTGTCTCAGAATTTTCGTCTTGTA 59.800 38.462 0.00 0.00 0.00 2.41
2472 2888 8.922676 GTCTCAGAATTTTCGTCTTGTACATAA 58.077 33.333 0.00 0.00 0.00 1.90
2507 2923 8.443937 GCTTATTCCCTTAATTAGATGCTTACG 58.556 37.037 0.00 0.00 0.00 3.18
2510 2926 7.781548 TTCCCTTAATTAGATGCTTACGAAC 57.218 36.000 0.00 0.00 0.00 3.95
2523 2939 2.505628 TACGAACAAGCACGGTGTAA 57.494 45.000 10.24 0.00 0.00 2.41
2537 2953 5.106475 GCACGGTGTAAGATATCTCTCCTAG 60.106 48.000 5.51 0.10 0.00 3.02
2542 2958 7.235804 GGTGTAAGATATCTCTCCTAGGAAGT 58.764 42.308 13.77 1.69 0.00 3.01
2543 2959 8.384718 GGTGTAAGATATCTCTCCTAGGAAGTA 58.615 40.741 13.77 3.94 0.00 2.24
2544 2960 9.223099 GTGTAAGATATCTCTCCTAGGAAGTAC 57.777 40.741 13.77 10.24 0.00 2.73
2587 3023 3.495670 GTTGGCTTTACACAACACACA 57.504 42.857 0.00 0.00 44.70 3.72
2632 3068 4.576463 AGTTGTAGTGTTCTTGCCTTCTTG 59.424 41.667 0.00 0.00 0.00 3.02
2646 3082 4.162040 CCTTCTTGGCATCTGATACCTT 57.838 45.455 8.34 0.00 0.00 3.50
2647 3083 4.530875 CCTTCTTGGCATCTGATACCTTT 58.469 43.478 8.34 0.00 0.00 3.11
2648 3084 4.337555 CCTTCTTGGCATCTGATACCTTTG 59.662 45.833 8.34 0.00 0.00 2.77
2649 3085 3.889815 TCTTGGCATCTGATACCTTTGG 58.110 45.455 8.34 0.00 0.00 3.28
2650 3086 3.266772 TCTTGGCATCTGATACCTTTGGT 59.733 43.478 8.34 0.00 40.16 3.67
2651 3087 4.473196 TCTTGGCATCTGATACCTTTGGTA 59.527 41.667 8.34 0.00 42.80 3.25
2652 3088 4.150897 TGGCATCTGATACCTTTGGTAC 57.849 45.455 8.34 0.00 41.31 3.34
2653 3089 3.780294 TGGCATCTGATACCTTTGGTACT 59.220 43.478 8.34 0.00 41.31 2.73
2654 3090 4.227300 TGGCATCTGATACCTTTGGTACTT 59.773 41.667 8.34 0.00 41.31 2.24
2655 3091 5.427157 TGGCATCTGATACCTTTGGTACTTA 59.573 40.000 8.34 0.00 41.31 2.24
2656 3092 6.069905 TGGCATCTGATACCTTTGGTACTTAA 60.070 38.462 8.34 0.00 41.31 1.85
2657 3093 6.998673 GGCATCTGATACCTTTGGTACTTAAT 59.001 38.462 0.00 0.00 41.31 1.40
2658 3094 7.502561 GGCATCTGATACCTTTGGTACTTAATT 59.497 37.037 0.00 0.00 41.31 1.40
2659 3095 9.555727 GCATCTGATACCTTTGGTACTTAATTA 57.444 33.333 0.00 0.00 41.31 1.40
2665 3101 9.761504 GATACCTTTGGTACTTAATTAGAGTCC 57.238 37.037 0.00 6.51 41.31 3.85
2666 3102 7.809880 ACCTTTGGTACTTAATTAGAGTCCT 57.190 36.000 0.00 0.00 32.11 3.85
2667 3103 8.906238 ACCTTTGGTACTTAATTAGAGTCCTA 57.094 34.615 0.00 0.00 32.11 2.94
2668 3104 8.756927 ACCTTTGGTACTTAATTAGAGTCCTAC 58.243 37.037 0.00 0.07 32.11 3.18
2669 3105 8.979534 CCTTTGGTACTTAATTAGAGTCCTACT 58.020 37.037 0.00 0.00 0.00 2.57
2723 3159 9.784376 ATAGGGCTAAATACTCCTGACATTATA 57.216 33.333 0.00 0.00 0.00 0.98
2774 3210 6.998673 ACTATCAGTTTCTACAACCTTTTGCT 59.001 34.615 0.00 0.00 36.00 3.91
2782 3218 3.726291 ACAACCTTTTGCTGCGTTATT 57.274 38.095 0.00 0.00 36.00 1.40
2783 3219 4.053469 ACAACCTTTTGCTGCGTTATTT 57.947 36.364 0.00 0.00 36.00 1.40
2784 3220 5.189659 ACAACCTTTTGCTGCGTTATTTA 57.810 34.783 0.00 0.00 36.00 1.40
2785 3221 5.778862 ACAACCTTTTGCTGCGTTATTTAT 58.221 33.333 0.00 0.00 36.00 1.40
2786 3222 6.915349 ACAACCTTTTGCTGCGTTATTTATA 58.085 32.000 0.00 0.00 36.00 0.98
2787 3223 6.804783 ACAACCTTTTGCTGCGTTATTTATAC 59.195 34.615 0.00 0.00 36.00 1.47
2801 3237 8.538039 GCGTTATTTATACCTGAAAGTACACTC 58.462 37.037 0.00 0.00 0.00 3.51
2810 3246 7.264373 ACCTGAAAGTACACTCAAAATTCTG 57.736 36.000 0.00 0.00 0.00 3.02
2811 3247 7.054124 ACCTGAAAGTACACTCAAAATTCTGA 58.946 34.615 0.00 0.00 0.00 3.27
2812 3248 7.012421 ACCTGAAAGTACACTCAAAATTCTGAC 59.988 37.037 0.00 0.00 0.00 3.51
2813 3249 7.227512 CCTGAAAGTACACTCAAAATTCTGACT 59.772 37.037 0.00 0.00 0.00 3.41
2814 3250 7.919690 TGAAAGTACACTCAAAATTCTGACTG 58.080 34.615 0.00 0.00 0.00 3.51
2815 3251 7.552687 TGAAAGTACACTCAAAATTCTGACTGT 59.447 33.333 0.00 0.67 0.00 3.55
2839 3283 4.751767 TCTTGGGAAGTTGCAACATTTT 57.248 36.364 30.11 16.58 0.00 1.82
2885 3329 1.620819 ACTTCTGTAGCTGGTGGAGTG 59.379 52.381 0.00 0.00 0.00 3.51
2891 3335 0.982852 TAGCTGGTGGAGTGATGGGG 60.983 60.000 0.00 0.00 0.00 4.96
2903 3347 3.452627 GAGTGATGGGGTACATGAAGAGT 59.547 47.826 0.00 0.00 40.72 3.24
3016 3472 1.604693 GGCGATCGGGTTAGGTATGTG 60.605 57.143 18.30 0.00 0.00 3.21
3030 3486 7.419750 GGTTAGGTATGTGGTATTCCTTCATCA 60.420 40.741 3.79 0.00 33.79 3.07
3057 3513 5.508200 TGTTTTGTGTGGTCCTTGTTATC 57.492 39.130 0.00 0.00 0.00 1.75
3065 3521 4.042311 TGTGGTCCTTGTTATCCTTTGCTA 59.958 41.667 0.00 0.00 0.00 3.49
3066 3522 5.193679 GTGGTCCTTGTTATCCTTTGCTAT 58.806 41.667 0.00 0.00 0.00 2.97
3082 3538 3.259207 GCTATGGAATTGCATCGACAC 57.741 47.619 16.40 0.00 44.58 3.67
3088 3548 2.352960 GGAATTGCATCGACACTCTTCC 59.647 50.000 0.00 0.00 0.00 3.46
3093 3553 0.460987 CATCGACACTCTTCCCCTGC 60.461 60.000 0.00 0.00 0.00 4.85
3125 3586 2.036217 CCTGATGTTTCTTGGCTTTGCA 59.964 45.455 0.00 0.00 0.00 4.08
3139 3600 6.125589 TGGCTTTGCATCATAGGTATATCA 57.874 37.500 0.00 0.00 0.00 2.15
3199 3660 2.104963 GTCCGGAAAGATATTCCCAGCT 59.895 50.000 5.23 0.00 35.17 4.24
3205 3666 0.839946 AGATATTCCCAGCTGGCGTT 59.160 50.000 28.39 15.28 0.00 4.84
3232 3693 3.500343 CCTTCTTTCCTTGGTCATGGTT 58.500 45.455 0.00 0.00 0.00 3.67
3288 3749 0.668706 GCGTGAGATGCAGTCAGTGT 60.669 55.000 1.80 0.00 0.00 3.55
3289 3750 1.402852 GCGTGAGATGCAGTCAGTGTA 60.403 52.381 1.80 0.00 0.00 2.90
3304 3765 5.422331 AGTCAGTGTAGTTACCATATGCACT 59.578 40.000 0.00 0.71 36.32 4.40
3307 3768 5.232202 CAGTGTAGTTACCATATGCACTTCG 59.768 44.000 7.04 0.00 34.04 3.79
3311 3772 3.131396 GTTACCATATGCACTTCGGGAG 58.869 50.000 0.00 0.00 0.00 4.30
3321 3782 2.288886 GCACTTCGGGAGTTAGACTTGT 60.289 50.000 0.00 0.00 36.10 3.16
3361 3823 1.657538 GCGTTTCGAAGCAGTTGTCTG 60.658 52.381 12.66 0.00 43.87 3.51
3371 3833 3.276857 AGCAGTTGTCTGGCATATCTTG 58.723 45.455 0.00 0.00 41.57 3.02
3404 3871 2.505819 ACCTTTGGTGACTGACTGACTT 59.494 45.455 0.00 0.00 32.98 3.01
3435 3903 4.394920 ACATTGTCGTTGAACTCAAGTTGT 59.605 37.500 2.11 6.37 38.56 3.32
3450 3927 6.313905 ACTCAAGTTGTTGTTCTAGTGAAGTG 59.686 38.462 2.11 0.00 34.98 3.16
3460 3937 3.441101 TCTAGTGAAGTGTGTATGGGCT 58.559 45.455 0.00 0.00 0.00 5.19
3484 3961 7.011669 GCTGATGGTGGAAATCAATAATTTTGG 59.988 37.037 0.00 0.00 37.70 3.28
3488 3965 7.749666 TGGTGGAAATCAATAATTTTGGGAAA 58.250 30.769 0.00 0.00 37.70 3.13
3489 3966 7.882271 TGGTGGAAATCAATAATTTTGGGAAAG 59.118 33.333 0.00 0.00 37.70 2.62
3490 3967 8.100164 GGTGGAAATCAATAATTTTGGGAAAGA 58.900 33.333 0.00 0.00 37.70 2.52
3492 3969 8.100164 TGGAAATCAATAATTTTGGGAAAGACC 58.900 33.333 0.00 0.00 37.70 3.85
3493 3970 7.277760 GGAAATCAATAATTTTGGGAAAGACCG 59.722 37.037 0.00 0.00 37.70 4.79
3494 3971 6.850752 ATCAATAATTTTGGGAAAGACCGT 57.149 33.333 0.00 0.00 40.11 4.83
3495 3972 7.948034 ATCAATAATTTTGGGAAAGACCGTA 57.052 32.000 0.00 0.00 40.11 4.02
3505 3982 2.354821 GGAAAGACCGTATGTGAATGGC 59.645 50.000 0.00 0.00 0.00 4.40
3508 3985 0.928229 GACCGTATGTGAATGGCGAC 59.072 55.000 0.00 0.00 0.00 5.19
3509 3986 0.535335 ACCGTATGTGAATGGCGACT 59.465 50.000 0.00 0.00 0.00 4.18
3541 4018 1.333619 GTTTCTGTGACCGTGTTGCAT 59.666 47.619 0.00 0.00 0.00 3.96
3544 4021 1.601903 TCTGTGACCGTGTTGCATTTC 59.398 47.619 0.00 0.00 0.00 2.17
3545 4022 0.665835 TGTGACCGTGTTGCATTTCC 59.334 50.000 0.00 0.00 0.00 3.13
3546 4023 0.039527 GTGACCGTGTTGCATTTCCC 60.040 55.000 0.00 0.00 0.00 3.97
3547 4024 1.175983 TGACCGTGTTGCATTTCCCC 61.176 55.000 0.00 0.00 0.00 4.81
3548 4025 1.873270 GACCGTGTTGCATTTCCCCC 61.873 60.000 0.00 0.00 0.00 5.40
3570 4047 5.762218 CCCCTCTTTGCTCTATGATTAGTTG 59.238 44.000 0.00 0.00 0.00 3.16
3576 4053 9.322773 TCTTTGCTCTATGATTAGTTGATGAAG 57.677 33.333 0.00 0.00 0.00 3.02
3580 4057 8.695456 TGCTCTATGATTAGTTGATGAAGTGTA 58.305 33.333 0.00 0.00 0.00 2.90
3648 4125 4.631377 TCACTTGTTCATATTCTTCGCCAG 59.369 41.667 0.00 0.00 0.00 4.85
3652 4129 2.939103 GTTCATATTCTTCGCCAGTGCT 59.061 45.455 0.00 0.00 34.43 4.40
3655 4132 0.179111 TATTCTTCGCCAGTGCTCCG 60.179 55.000 0.00 0.00 34.43 4.63
3679 4156 1.792006 CGTTGAGCTTAACCGTTCCT 58.208 50.000 15.07 0.00 0.00 3.36
3691 4168 2.359975 GTTCCTGGAACCGGCCTG 60.360 66.667 25.74 0.00 36.65 4.85
3695 4172 2.370445 CCTGGAACCGGCCTGATCT 61.370 63.158 0.00 0.00 0.00 2.75
3710 4187 4.795278 GCCTGATCTATTTTGTTTGCTTCG 59.205 41.667 0.00 0.00 0.00 3.79
3728 4205 3.536956 TCGTATTGGCTTTGGTAGGAG 57.463 47.619 0.00 0.00 0.00 3.69
3730 4207 1.940613 GTATTGGCTTTGGTAGGAGCG 59.059 52.381 0.00 0.00 39.78 5.03
3743 4220 1.521681 GGAGCGTTCCTCGGGATTG 60.522 63.158 11.59 0.00 41.71 2.67
3744 4221 2.125106 AGCGTTCCTCGGGATTGC 60.125 61.111 0.00 0.00 40.26 3.56
3745 4222 3.564027 GCGTTCCTCGGGATTGCG 61.564 66.667 0.00 0.00 40.26 4.85
3755 4239 1.675641 GGGATTGCGTGCAGGTCTT 60.676 57.895 8.40 0.00 0.00 3.01
3756 4240 1.503542 GGATTGCGTGCAGGTCTTG 59.496 57.895 8.40 0.00 0.00 3.02
3761 4245 0.035317 TGCGTGCAGGTCTTGATCTT 59.965 50.000 8.40 0.00 0.00 2.40
3815 4299 2.376518 AGACAAAGGGCTCTGGAATTCA 59.623 45.455 7.93 0.00 0.00 2.57
3830 4314 3.703052 GGAATTCACCTTCATGAATGGCT 59.297 43.478 8.96 1.88 46.35 4.75
3860 4356 1.609320 GCCCAGAGAGTCACAAGAACC 60.609 57.143 0.00 0.00 0.00 3.62
3863 4359 2.028567 CCAGAGAGTCACAAGAACCTCC 60.029 54.545 0.00 0.00 0.00 4.30
3877 4373 2.271944 ACCTCCACAAACTTAGCACC 57.728 50.000 0.00 0.00 0.00 5.01
3878 4374 1.156736 CCTCCACAAACTTAGCACCG 58.843 55.000 0.00 0.00 0.00 4.94
3904 4400 1.202687 TGTCCTGCTCAGACCAAACAG 60.203 52.381 0.00 0.00 0.00 3.16
3905 4401 1.070758 GTCCTGCTCAGACCAAACAGA 59.929 52.381 0.00 0.00 0.00 3.41
3951 4466 0.486879 ACCAAAAAGAGGGATGGCCA 59.513 50.000 8.56 8.56 36.37 5.36
3965 4480 2.042686 TGGCCAAATCATCTTCTCGG 57.957 50.000 0.61 0.00 0.00 4.63
3977 4492 2.549611 CTTCTCGGAGGCACCAGACG 62.550 65.000 4.96 0.00 38.90 4.18
4001 4516 3.255642 TCTTTGCCAAATTACAGTCCAGC 59.744 43.478 0.00 0.00 0.00 4.85
4027 4542 1.873591 GTGCTTCCACGAATCAACAGT 59.126 47.619 0.00 0.00 31.34 3.55
4045 4560 3.802139 ACAGTTGCATTACATATCGGACG 59.198 43.478 0.00 0.00 0.00 4.79
4132 4921 7.255070 GGCAAGTCTTCAATATTCCATTCTCTC 60.255 40.741 0.00 0.00 0.00 3.20
4137 4926 7.278868 GTCTTCAATATTCCATTCTCTCGTTGT 59.721 37.037 0.00 0.00 0.00 3.32
4179 4968 3.955471 CCATCTGTGGTGGATTTGTACT 58.045 45.455 0.00 0.00 40.83 2.73
4180 4969 4.335416 CCATCTGTGGTGGATTTGTACTT 58.665 43.478 0.00 0.00 40.83 2.24
4181 4970 4.766891 CCATCTGTGGTGGATTTGTACTTT 59.233 41.667 0.00 0.00 40.83 2.66
4182 4971 5.335897 CCATCTGTGGTGGATTTGTACTTTG 60.336 44.000 0.00 0.00 40.83 2.77
4183 4972 4.787551 TCTGTGGTGGATTTGTACTTTGT 58.212 39.130 0.00 0.00 0.00 2.83
4184 4973 5.931294 TCTGTGGTGGATTTGTACTTTGTA 58.069 37.500 0.00 0.00 0.00 2.41
4191 4980 6.653320 GGTGGATTTGTACTTTGTAGTGATCA 59.347 38.462 0.00 0.00 35.78 2.92
4207 4996 1.739466 GATCACACATGTTGGACGCAT 59.261 47.619 0.00 0.00 0.00 4.73
4214 5003 1.811965 CATGTTGGACGCATCCTGAAA 59.188 47.619 0.00 0.00 46.43 2.69
4223 5012 0.181350 GCATCCTGAAATCCCTCGGT 59.819 55.000 0.00 0.00 0.00 4.69
4232 5021 5.433526 CTGAAATCCCTCGGTAACCAATTA 58.566 41.667 0.00 0.00 0.00 1.40
4246 5035 5.587388 AACCAATTATCTGACCAAGCATG 57.413 39.130 0.00 0.00 0.00 4.06
4252 5041 2.099141 TCTGACCAAGCATGTGTAGC 57.901 50.000 0.00 0.00 0.00 3.58
4261 5050 1.134280 AGCATGTGTAGCTGTCCCATC 60.134 52.381 0.00 0.00 41.61 3.51
4276 5065 0.385390 CCATCCCCAATGCGCTTAAC 59.615 55.000 9.73 0.00 33.71 2.01
4277 5066 0.385390 CATCCCCAATGCGCTTAACC 59.615 55.000 9.73 0.00 0.00 2.85
4310 5099 0.107654 GTATGTCCCTGCCCTCACAC 60.108 60.000 0.00 0.00 0.00 3.82
4345 5134 3.177228 CCCTGGATGGATTAGGACCTAG 58.823 54.545 0.48 0.00 38.35 3.02
4347 5136 3.242867 CTGGATGGATTAGGACCTAGCA 58.757 50.000 0.48 0.00 0.00 3.49
4352 5141 1.070914 GGATTAGGACCTAGCACAGCC 59.929 57.143 0.48 0.00 0.00 4.85
4380 5169 5.491078 AGGACATCTGAAGTGGGGTAATAAA 59.509 40.000 0.00 0.00 0.00 1.40
4394 5183 5.296531 GGGGTAATAAATTGCCTGCAAAATG 59.703 40.000 8.84 0.00 41.57 2.32
4395 5184 5.879777 GGGTAATAAATTGCCTGCAAAATGT 59.120 36.000 8.84 0.00 41.57 2.71
4396 5185 6.183360 GGGTAATAAATTGCCTGCAAAATGTG 60.183 38.462 8.84 0.00 41.57 3.21
4397 5186 6.593382 GGTAATAAATTGCCTGCAAAATGTGA 59.407 34.615 8.84 0.00 39.17 3.58
4398 5187 7.118971 GGTAATAAATTGCCTGCAAAATGTGAA 59.881 33.333 8.84 0.00 39.17 3.18
4399 5188 4.816786 AAATTGCCTGCAAAATGTGAAC 57.183 36.364 8.84 0.00 39.55 3.18
4400 5189 3.756933 ATTGCCTGCAAAATGTGAACT 57.243 38.095 8.84 0.00 39.55 3.01
4401 5190 4.870123 ATTGCCTGCAAAATGTGAACTA 57.130 36.364 8.84 0.00 39.55 2.24
4402 5191 3.641437 TGCCTGCAAAATGTGAACTAC 57.359 42.857 0.00 0.00 0.00 2.73
4403 5192 2.954989 TGCCTGCAAAATGTGAACTACA 59.045 40.909 0.00 0.00 44.87 2.74
4404 5193 5.279607 ATTGCCTGCAAAATGTGAACTACAT 60.280 36.000 8.84 0.00 43.51 2.29
4416 5205 6.944557 TGTGAACTACATTGACTATCGTTG 57.055 37.500 0.00 0.00 33.42 4.10
4417 5206 6.452242 TGTGAACTACATTGACTATCGTTGT 58.548 36.000 0.00 0.00 33.42 3.32
4418 5207 6.926826 TGTGAACTACATTGACTATCGTTGTT 59.073 34.615 0.00 0.00 33.42 2.83
4419 5208 7.439955 TGTGAACTACATTGACTATCGTTGTTT 59.560 33.333 0.00 0.00 33.42 2.83
4420 5209 8.918658 GTGAACTACATTGACTATCGTTGTTTA 58.081 33.333 0.00 0.00 29.61 2.01
4421 5210 8.918658 TGAACTACATTGACTATCGTTGTTTAC 58.081 33.333 0.00 0.00 29.61 2.01
4422 5211 7.823149 ACTACATTGACTATCGTTGTTTACC 57.177 36.000 0.00 0.00 0.00 2.85
4423 5212 7.380536 ACTACATTGACTATCGTTGTTTACCA 58.619 34.615 0.00 0.00 0.00 3.25
4424 5213 7.874016 ACTACATTGACTATCGTTGTTTACCAA 59.126 33.333 0.00 0.00 0.00 3.67
4425 5214 7.499321 ACATTGACTATCGTTGTTTACCAAA 57.501 32.000 0.00 0.00 34.07 3.28
4426 5215 8.106247 ACATTGACTATCGTTGTTTACCAAAT 57.894 30.769 0.00 0.00 34.07 2.32
4427 5216 8.573035 ACATTGACTATCGTTGTTTACCAAATT 58.427 29.630 0.00 0.00 34.07 1.82
4428 5217 9.061610 CATTGACTATCGTTGTTTACCAAATTC 57.938 33.333 0.00 0.00 34.07 2.17
4429 5218 7.731882 TGACTATCGTTGTTTACCAAATTCA 57.268 32.000 0.00 0.00 34.07 2.57
4430 5219 8.330466 TGACTATCGTTGTTTACCAAATTCAT 57.670 30.769 0.00 0.00 34.07 2.57
4431 5220 8.788806 TGACTATCGTTGTTTACCAAATTCATT 58.211 29.630 0.00 0.00 34.07 2.57
4446 5235 8.260114 ACCAAATTCATTATTTAGCTTTCTGGG 58.740 33.333 0.00 0.00 34.69 4.45
4447 5236 8.260114 CCAAATTCATTATTTAGCTTTCTGGGT 58.740 33.333 0.00 0.00 34.69 4.51
4448 5237 9.090692 CAAATTCATTATTTAGCTTTCTGGGTG 57.909 33.333 0.00 0.00 34.69 4.61
4449 5238 5.835113 TCATTATTTAGCTTTCTGGGTGC 57.165 39.130 0.00 0.00 0.00 5.01
4450 5239 5.260424 TCATTATTTAGCTTTCTGGGTGCA 58.740 37.500 0.00 0.00 0.00 4.57
4451 5240 5.714333 TCATTATTTAGCTTTCTGGGTGCAA 59.286 36.000 0.00 0.00 0.00 4.08
4452 5241 5.643379 TTATTTAGCTTTCTGGGTGCAAG 57.357 39.130 0.00 0.00 0.00 4.01
4453 5242 1.909700 TTAGCTTTCTGGGTGCAAGG 58.090 50.000 0.00 0.00 0.00 3.61
4454 5243 1.064003 TAGCTTTCTGGGTGCAAGGA 58.936 50.000 0.00 0.00 0.00 3.36
4455 5244 0.185901 AGCTTTCTGGGTGCAAGGAA 59.814 50.000 0.00 0.00 0.00 3.36
4456 5245 1.039856 GCTTTCTGGGTGCAAGGAAA 58.960 50.000 0.00 0.00 0.00 3.13
4457 5246 1.269778 GCTTTCTGGGTGCAAGGAAAC 60.270 52.381 0.00 0.00 0.00 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 0.250945 TTGTAGTGCCGCCCATTGAA 60.251 50.000 0.00 0.00 0.00 2.69
69 70 5.536538 TCGAATAGATGTCATCTGCTAGGTT 59.463 40.000 23.17 9.45 40.51 3.50
96 97 8.877864 AGATAGTTTTCACAAATATGGACCAA 57.122 30.769 0.00 0.00 0.00 3.67
114 115 4.460382 CCTGGCACAATGTTTGAGATAGTT 59.540 41.667 0.00 0.00 38.70 2.24
176 177 1.219124 GCTCGACATCCTTCCTGCA 59.781 57.895 0.00 0.00 0.00 4.41
219 220 4.310357 GGGTACCGAACAACAACAAATT 57.690 40.909 5.65 0.00 40.86 1.82
255 256 8.044908 TCATGATCTCTCACATTTGATCTTTCA 58.955 33.333 0.00 0.00 37.00 2.69
271 274 1.552337 ACACGGCAAGTCATGATCTCT 59.448 47.619 0.00 0.00 0.00 3.10
287 290 2.223845 TCATGTTGTGCAAGATGACACG 59.776 45.455 17.21 0.00 43.38 4.49
346 356 3.123273 ACCCTGCCTGTAATATGGTTCT 58.877 45.455 0.00 0.00 0.00 3.01
389 399 1.684391 TCCAGGTTGCCGCTAGCTA 60.684 57.895 13.93 0.00 44.23 3.32
395 405 2.167398 TAGTCAGTCCAGGTTGCCGC 62.167 60.000 0.00 0.00 0.00 6.53
411 421 3.296854 TCCTGACGCATATTGAGGTAGT 58.703 45.455 0.00 0.00 0.00 2.73
451 462 3.713858 TCTTGTTGCAGTTGTTGATGG 57.286 42.857 0.00 0.00 0.00 3.51
505 516 2.202623 CACACGCCGAGCTAGTCC 60.203 66.667 0.00 0.00 0.00 3.85
507 518 1.080705 GTTCACACGCCGAGCTAGT 60.081 57.895 0.00 0.00 0.00 2.57
639 653 3.660111 GCCCATATTCGCCGTGCC 61.660 66.667 0.00 0.00 0.00 5.01
856 888 6.398234 TTTGCCATACTTGAGTTGCTTAAA 57.602 33.333 0.00 0.00 0.00 1.52
857 889 6.015519 ACATTTGCCATACTTGAGTTGCTTAA 60.016 34.615 0.00 0.00 0.00 1.85
858 890 5.476599 ACATTTGCCATACTTGAGTTGCTTA 59.523 36.000 0.00 0.00 0.00 3.09
859 891 4.281688 ACATTTGCCATACTTGAGTTGCTT 59.718 37.500 0.00 0.00 0.00 3.91
860 892 3.828451 ACATTTGCCATACTTGAGTTGCT 59.172 39.130 0.00 0.00 0.00 3.91
861 893 3.922240 CACATTTGCCATACTTGAGTTGC 59.078 43.478 0.00 0.00 0.00 4.17
862 894 5.156355 GTCACATTTGCCATACTTGAGTTG 58.844 41.667 0.00 0.00 0.00 3.16
863 895 4.826733 TGTCACATTTGCCATACTTGAGTT 59.173 37.500 0.00 0.00 0.00 3.01
864 896 4.397420 TGTCACATTTGCCATACTTGAGT 58.603 39.130 0.00 0.00 0.00 3.41
865 897 5.375417 TTGTCACATTTGCCATACTTGAG 57.625 39.130 0.00 0.00 0.00 3.02
866 898 5.781210 TTTGTCACATTTGCCATACTTGA 57.219 34.783 0.00 0.00 0.00 3.02
867 899 9.800433 TTATATTTGTCACATTTGCCATACTTG 57.200 29.630 0.00 0.00 0.00 3.16
868 900 9.801873 GTTATATTTGTCACATTTGCCATACTT 57.198 29.630 0.00 0.00 0.00 2.24
869 901 8.965819 TGTTATATTTGTCACATTTGCCATACT 58.034 29.630 0.00 0.00 0.00 2.12
870 902 9.579768 TTGTTATATTTGTCACATTTGCCATAC 57.420 29.630 0.00 0.00 0.00 2.39
872 904 9.499479 TTTTGTTATATTTGTCACATTTGCCAT 57.501 25.926 0.00 0.00 0.00 4.40
873 905 8.893219 TTTTGTTATATTTGTCACATTTGCCA 57.107 26.923 0.00 0.00 0.00 4.92
882 914 9.149225 GCCACATGATTTTTGTTATATTTGTCA 57.851 29.630 0.00 0.00 0.00 3.58
883 915 9.149225 TGCCACATGATTTTTGTTATATTTGTC 57.851 29.630 0.00 0.00 0.00 3.18
884 916 9.499479 TTGCCACATGATTTTTGTTATATTTGT 57.501 25.926 0.00 0.00 0.00 2.83
887 919 9.669887 ACATTGCCACATGATTTTTGTTATATT 57.330 25.926 0.00 0.00 0.00 1.28
890 922 9.100554 CATACATTGCCACATGATTTTTGTTAT 57.899 29.630 0.00 0.00 0.00 1.89
891 923 7.548427 CCATACATTGCCACATGATTTTTGTTA 59.452 33.333 0.00 0.00 0.00 2.41
892 924 6.372103 CCATACATTGCCACATGATTTTTGTT 59.628 34.615 0.00 0.00 0.00 2.83
893 925 5.875910 CCATACATTGCCACATGATTTTTGT 59.124 36.000 0.00 0.00 0.00 2.83
894 926 5.220700 GCCATACATTGCCACATGATTTTTG 60.221 40.000 0.00 0.00 0.00 2.44
895 927 4.877251 GCCATACATTGCCACATGATTTTT 59.123 37.500 0.00 0.00 0.00 1.94
896 928 4.081031 TGCCATACATTGCCACATGATTTT 60.081 37.500 0.00 0.00 0.00 1.82
897 929 3.451540 TGCCATACATTGCCACATGATTT 59.548 39.130 0.00 0.00 0.00 2.17
898 930 3.032459 TGCCATACATTGCCACATGATT 58.968 40.909 0.00 0.00 0.00 2.57
899 931 2.668625 TGCCATACATTGCCACATGAT 58.331 42.857 0.00 0.00 0.00 2.45
900 932 2.140839 TGCCATACATTGCCACATGA 57.859 45.000 0.00 0.00 0.00 3.07
901 933 2.963548 TTGCCATACATTGCCACATG 57.036 45.000 0.00 0.00 0.00 3.21
902 934 3.098377 TCTTTGCCATACATTGCCACAT 58.902 40.909 0.00 0.00 0.00 3.21
903 935 2.523245 TCTTTGCCATACATTGCCACA 58.477 42.857 0.00 0.00 0.00 4.17
904 936 3.806625 ATCTTTGCCATACATTGCCAC 57.193 42.857 0.00 0.00 0.00 5.01
905 937 5.278414 CGATTATCTTTGCCATACATTGCCA 60.278 40.000 0.00 0.00 0.00 4.92
906 938 5.156355 CGATTATCTTTGCCATACATTGCC 58.844 41.667 0.00 0.00 0.00 4.52
907 939 5.762045 ACGATTATCTTTGCCATACATTGC 58.238 37.500 0.00 0.00 0.00 3.56
908 940 6.852853 GTGACGATTATCTTTGCCATACATTG 59.147 38.462 0.00 0.00 0.00 2.82
909 941 6.542005 TGTGACGATTATCTTTGCCATACATT 59.458 34.615 0.00 0.00 0.00 2.71
910 942 6.054941 TGTGACGATTATCTTTGCCATACAT 58.945 36.000 0.00 0.00 0.00 2.29
911 943 5.423886 TGTGACGATTATCTTTGCCATACA 58.576 37.500 0.00 0.00 0.00 2.29
912 944 5.984233 TGTGACGATTATCTTTGCCATAC 57.016 39.130 0.00 0.00 0.00 2.39
913 945 5.295787 GGTTGTGACGATTATCTTTGCCATA 59.704 40.000 0.00 0.00 0.00 2.74
914 946 4.096382 GGTTGTGACGATTATCTTTGCCAT 59.904 41.667 0.00 0.00 0.00 4.40
915 947 3.438781 GGTTGTGACGATTATCTTTGCCA 59.561 43.478 0.00 0.00 0.00 4.92
916 948 3.181500 GGGTTGTGACGATTATCTTTGCC 60.181 47.826 0.00 0.00 0.00 4.52
917 949 3.438781 TGGGTTGTGACGATTATCTTTGC 59.561 43.478 0.00 0.00 0.00 3.68
918 950 5.621197 TTGGGTTGTGACGATTATCTTTG 57.379 39.130 0.00 0.00 0.00 2.77
919 951 5.533154 TGTTTGGGTTGTGACGATTATCTTT 59.467 36.000 0.00 0.00 0.00 2.52
920 952 5.067273 TGTTTGGGTTGTGACGATTATCTT 58.933 37.500 0.00 0.00 0.00 2.40
921 953 4.647611 TGTTTGGGTTGTGACGATTATCT 58.352 39.130 0.00 0.00 0.00 1.98
922 954 5.151389 GTTGTTTGGGTTGTGACGATTATC 58.849 41.667 0.00 0.00 0.00 1.75
923 955 4.022676 GGTTGTTTGGGTTGTGACGATTAT 60.023 41.667 0.00 0.00 0.00 1.28
924 956 3.315749 GGTTGTTTGGGTTGTGACGATTA 59.684 43.478 0.00 0.00 0.00 1.75
925 957 2.100087 GGTTGTTTGGGTTGTGACGATT 59.900 45.455 0.00 0.00 0.00 3.34
926 958 1.679153 GGTTGTTTGGGTTGTGACGAT 59.321 47.619 0.00 0.00 0.00 3.73
927 959 1.096416 GGTTGTTTGGGTTGTGACGA 58.904 50.000 0.00 0.00 0.00 4.20
928 960 0.101579 GGGTTGTTTGGGTTGTGACG 59.898 55.000 0.00 0.00 0.00 4.35
929 961 1.480789 AGGGTTGTTTGGGTTGTGAC 58.519 50.000 0.00 0.00 0.00 3.67
930 962 2.239681 AAGGGTTGTTTGGGTTGTGA 57.760 45.000 0.00 0.00 0.00 3.58
931 963 3.449377 ACTTAAGGGTTGTTTGGGTTGTG 59.551 43.478 7.53 0.00 0.00 3.33
932 964 3.449377 CACTTAAGGGTTGTTTGGGTTGT 59.551 43.478 7.53 0.00 0.00 3.32
933 965 3.739830 GCACTTAAGGGTTGTTTGGGTTG 60.740 47.826 6.59 0.00 0.00 3.77
934 966 2.432874 GCACTTAAGGGTTGTTTGGGTT 59.567 45.455 6.59 0.00 0.00 4.11
935 967 2.036387 GCACTTAAGGGTTGTTTGGGT 58.964 47.619 6.59 0.00 0.00 4.51
936 968 1.343142 GGCACTTAAGGGTTGTTTGGG 59.657 52.381 6.59 0.00 0.00 4.12
937 969 2.035632 TGGCACTTAAGGGTTGTTTGG 58.964 47.619 6.59 0.00 0.00 3.28
938 970 3.383185 TCTTGGCACTTAAGGGTTGTTTG 59.617 43.478 6.59 0.00 0.00 2.93
939 971 3.383505 GTCTTGGCACTTAAGGGTTGTTT 59.616 43.478 6.59 0.00 0.00 2.83
940 972 2.956333 GTCTTGGCACTTAAGGGTTGTT 59.044 45.455 6.59 0.00 0.00 2.83
941 973 2.583143 GTCTTGGCACTTAAGGGTTGT 58.417 47.619 6.59 0.00 0.00 3.32
942 974 1.886542 GGTCTTGGCACTTAAGGGTTG 59.113 52.381 6.59 0.00 0.00 3.77
943 975 1.203013 GGGTCTTGGCACTTAAGGGTT 60.203 52.381 6.59 0.00 0.00 4.11
944 976 0.404426 GGGTCTTGGCACTTAAGGGT 59.596 55.000 6.59 0.00 0.00 4.34
945 977 0.323451 GGGGTCTTGGCACTTAAGGG 60.323 60.000 7.53 3.32 0.00 3.95
946 978 0.404040 TGGGGTCTTGGCACTTAAGG 59.596 55.000 7.53 0.00 0.00 2.69
947 979 1.534729 GTGGGGTCTTGGCACTTAAG 58.465 55.000 0.00 0.00 0.00 1.85
948 980 0.111639 GGTGGGGTCTTGGCACTTAA 59.888 55.000 0.00 0.00 0.00 1.85
949 981 1.765074 GGTGGGGTCTTGGCACTTA 59.235 57.895 0.00 0.00 0.00 2.24
950 982 2.520968 GGTGGGGTCTTGGCACTT 59.479 61.111 0.00 0.00 0.00 3.16
951 983 3.580319 GGGTGGGGTCTTGGCACT 61.580 66.667 0.00 0.00 0.00 4.40
952 984 3.897122 TGGGTGGGGTCTTGGCAC 61.897 66.667 0.00 0.00 0.00 5.01
953 985 3.897122 GTGGGTGGGGTCTTGGCA 61.897 66.667 0.00 0.00 0.00 4.92
960 992 3.091190 TGTCAACGTGGGTGGGGT 61.091 61.111 0.00 0.00 0.00 4.95
971 1003 3.284449 GGTGGGTGGCGTGTCAAC 61.284 66.667 0.00 0.00 0.00 3.18
972 1004 4.572571 GGGTGGGTGGCGTGTCAA 62.573 66.667 0.00 0.00 0.00 3.18
1005 1038 4.108902 CGGTGATGTGATGGACCG 57.891 61.111 0.00 0.00 44.86 4.79
1007 1040 2.271800 GAACTCGGTGATGTGATGGAC 58.728 52.381 0.00 0.00 0.00 4.02
1008 1041 1.899142 TGAACTCGGTGATGTGATGGA 59.101 47.619 0.00 0.00 0.00 3.41
1370 1407 4.191015 GCCCGTCCCCCATCTTCC 62.191 72.222 0.00 0.00 0.00 3.46
1383 1420 4.147449 TGCGACATGGAGAGCCCG 62.147 66.667 0.00 0.00 37.93 6.13
1453 1494 3.840468 TCTGCACTTATCGCTACGAAAA 58.160 40.909 0.00 0.00 39.99 2.29
1456 1497 2.858646 GCATCTGCACTTATCGCTACGA 60.859 50.000 0.00 0.00 41.59 3.43
1458 1499 1.453524 CGCATCTGCACTTATCGCTAC 59.546 52.381 2.72 0.00 42.21 3.58
1467 1515 1.024271 AAACACAACGCATCTGCACT 58.976 45.000 2.72 0.00 42.21 4.40
1468 1516 1.122849 CAAACACAACGCATCTGCAC 58.877 50.000 2.72 0.00 42.21 4.57
1538 1586 5.367352 AGGGTCACACGGATAATAATGGTTA 59.633 40.000 0.00 0.00 0.00 2.85
1539 1587 4.165372 AGGGTCACACGGATAATAATGGTT 59.835 41.667 0.00 0.00 0.00 3.67
1540 1588 3.714798 AGGGTCACACGGATAATAATGGT 59.285 43.478 0.00 0.00 0.00 3.55
1549 1597 1.267574 ATCAGCAGGGTCACACGGAT 61.268 55.000 0.00 0.00 0.00 4.18
1559 1607 2.762887 TCAGACTTCAGTATCAGCAGGG 59.237 50.000 0.00 0.00 0.00 4.45
1641 1689 7.707467 ATAAACTGGGGATAATCCACTAGTT 57.293 36.000 0.00 0.00 41.69 2.24
1642 1690 7.707467 AATAAACTGGGGATAATCCACTAGT 57.293 36.000 0.00 0.00 41.69 2.57
1682 1730 5.726980 ATCTTGCCTAAAATGCAGACAAA 57.273 34.783 0.00 0.00 40.35 2.83
1686 1734 5.125417 GGTGTAATCTTGCCTAAAATGCAGA 59.875 40.000 0.00 0.00 40.35 4.26
1770 1830 2.366533 CATATCATGGGATGCCTCAGC 58.633 52.381 4.35 0.00 40.48 4.26
1771 1831 3.000684 CCATATCATGGGATGCCTCAG 57.999 52.381 4.35 0.00 46.86 3.35
1782 1842 6.825213 CACCCCTGATATACAACCATATCATG 59.175 42.308 6.33 4.53 43.54 3.07
1783 1843 6.579042 GCACCCCTGATATACAACCATATCAT 60.579 42.308 6.33 0.00 43.54 2.45
1784 1844 5.280470 GCACCCCTGATATACAACCATATCA 60.280 44.000 5.85 5.85 42.76 2.15
1785 1845 5.186198 GCACCCCTGATATACAACCATATC 58.814 45.833 0.00 0.00 38.07 1.63
1786 1846 4.601420 TGCACCCCTGATATACAACCATAT 59.399 41.667 0.00 0.00 0.00 1.78
1787 1847 3.977326 TGCACCCCTGATATACAACCATA 59.023 43.478 0.00 0.00 0.00 2.74
1788 1848 2.782925 TGCACCCCTGATATACAACCAT 59.217 45.455 0.00 0.00 0.00 3.55
1789 1849 2.200955 TGCACCCCTGATATACAACCA 58.799 47.619 0.00 0.00 0.00 3.67
1808 1868 4.082665 ACTGGGAGCATATCATCACTTG 57.917 45.455 0.00 0.00 0.00 3.16
1813 1873 5.555017 ACACAATACTGGGAGCATATCATC 58.445 41.667 0.00 0.00 0.00 2.92
1814 1874 5.573380 ACACAATACTGGGAGCATATCAT 57.427 39.130 0.00 0.00 0.00 2.45
1815 1875 6.493189 TTACACAATACTGGGAGCATATCA 57.507 37.500 0.00 0.00 0.00 2.15
1816 1876 7.499232 AGTTTTACACAATACTGGGAGCATATC 59.501 37.037 0.00 0.00 0.00 1.63
1817 1877 7.346471 AGTTTTACACAATACTGGGAGCATAT 58.654 34.615 0.00 0.00 0.00 1.78
1818 1878 6.717289 AGTTTTACACAATACTGGGAGCATA 58.283 36.000 0.00 0.00 0.00 3.14
1846 1978 3.195610 GGGCCCCATTTTCACTAAGAAAG 59.804 47.826 12.23 0.00 46.24 2.62
1854 1986 1.595093 CTGTCGGGCCCCATTTTCAC 61.595 60.000 18.66 1.99 0.00 3.18
1869 2003 4.467198 TTTTCGATAAGAGGGGTCTGTC 57.533 45.455 0.00 0.00 0.00 3.51
1871 2005 6.163135 ACTATTTTCGATAAGAGGGGTCTG 57.837 41.667 13.56 0.00 0.00 3.51
1873 2007 9.857957 CTATTACTATTTTCGATAAGAGGGGTC 57.142 37.037 13.56 0.00 0.00 4.46
1874 2008 8.312564 GCTATTACTATTTTCGATAAGAGGGGT 58.687 37.037 13.56 3.11 0.00 4.95
1899 2038 9.807649 ATCAAATAAGTTCATTACCTTGATTGC 57.192 29.630 0.00 0.00 36.64 3.56
1925 2064 6.917477 GCATGTCAGTTTTAATCACTGTTTCA 59.083 34.615 12.70 11.17 42.12 2.69
1940 2079 5.301551 TGTTTCTACAATTGGCATGTCAGTT 59.698 36.000 10.83 1.68 32.27 3.16
1942 2081 5.375417 TGTTTCTACAATTGGCATGTCAG 57.625 39.130 10.83 0.00 32.27 3.51
1945 2084 5.789643 ACTTGTTTCTACAATTGGCATGT 57.210 34.783 10.83 0.00 43.02 3.21
1954 2093 3.072476 AGCCTGCCTACTTGTTTCTACAA 59.928 43.478 0.00 0.00 41.82 2.41
1964 2103 1.699634 TGTTGAAGAGCCTGCCTACTT 59.300 47.619 0.00 0.00 0.00 2.24
1969 2108 1.731720 CTAGTGTTGAAGAGCCTGCC 58.268 55.000 0.00 0.00 0.00 4.85
1978 2117 6.759272 ACAGAGTAATCAAGCTAGTGTTGAA 58.241 36.000 12.07 0.00 37.46 2.69
1987 2126 4.100373 AGGAGGAACAGAGTAATCAAGCT 58.900 43.478 0.00 0.00 0.00 3.74
2028 2167 6.839124 AATTTGCTGATCACATCCAAGTTA 57.161 33.333 0.00 0.00 0.00 2.24
2038 2177 5.967674 CCATCTTCGTAAATTTGCTGATCAC 59.032 40.000 0.00 0.00 0.00 3.06
2041 2180 6.757897 TTCCATCTTCGTAAATTTGCTGAT 57.242 33.333 0.00 1.34 0.00 2.90
2053 2192 3.203040 AGGATCCCAATTTCCATCTTCGT 59.797 43.478 8.55 0.00 34.27 3.85
2055 2194 5.896106 AGAAAGGATCCCAATTTCCATCTTC 59.104 40.000 17.17 0.00 34.23 2.87
2061 2200 7.725844 ACACATATAGAAAGGATCCCAATTTCC 59.274 37.037 17.17 4.64 34.23 3.13
2071 2210 8.263640 GCATCCTATGACACATATAGAAAGGAT 58.736 37.037 0.00 0.00 40.98 3.24
2075 2214 7.039714 ACGAGCATCCTATGACACATATAGAAA 60.040 37.037 0.00 0.00 31.26 2.52
2078 2217 6.094742 AGACGAGCATCCTATGACACATATAG 59.905 42.308 0.00 0.00 0.00 1.31
2112 2251 9.953565 GGGCACTTAACAGTCCATAATATTATA 57.046 33.333 7.65 0.00 0.00 0.98
2113 2252 8.669571 AGGGCACTTAACAGTCCATAATATTAT 58.330 33.333 1.91 1.91 0.00 1.28
2116 2255 6.101150 TGAGGGCACTTAACAGTCCATAATAT 59.899 38.462 0.00 0.00 0.00 1.28
2117 2256 5.427157 TGAGGGCACTTAACAGTCCATAATA 59.573 40.000 0.00 0.00 0.00 0.98
2118 2257 4.227300 TGAGGGCACTTAACAGTCCATAAT 59.773 41.667 0.00 0.00 0.00 1.28
2119 2258 3.585289 TGAGGGCACTTAACAGTCCATAA 59.415 43.478 0.00 0.00 0.00 1.90
2130 2270 4.316025 AGCCTTTATTTGAGGGCACTTA 57.684 40.909 0.00 0.00 46.23 2.24
2132 2272 2.907458 AGCCTTTATTTGAGGGCACT 57.093 45.000 0.00 0.00 46.23 4.40
2142 2282 6.578023 TGTGCTTTGTTTGTAAGCCTTTATT 58.422 32.000 0.00 0.00 45.73 1.40
2143 2283 6.155475 TGTGCTTTGTTTGTAAGCCTTTAT 57.845 33.333 0.00 0.00 45.73 1.40
2155 2295 2.358898 CTGCCTACACTGTGCTTTGTTT 59.641 45.455 7.90 0.00 0.00 2.83
2175 2315 2.369203 CTGGATCTGGATGCTCATGACT 59.631 50.000 0.00 0.00 0.00 3.41
2176 2316 2.367894 TCTGGATCTGGATGCTCATGAC 59.632 50.000 0.00 0.00 0.00 3.06
2180 2320 2.105993 CCAATCTGGATCTGGATGCTCA 59.894 50.000 3.95 0.00 40.96 4.26
2199 2339 1.484038 AAGCCAAGCACTTGTTTCCA 58.516 45.000 9.41 0.00 38.85 3.53
2200 2340 2.602257 AAAGCCAAGCACTTGTTTCC 57.398 45.000 9.41 0.00 38.85 3.13
2205 2345 3.084039 TCTGGATAAAGCCAAGCACTTG 58.916 45.455 3.32 3.32 37.52 3.16
2211 2351 4.428294 TCTGGATCTGGATAAAGCCAAG 57.572 45.455 0.00 0.00 37.52 3.61
2222 2362 4.096190 ACTGCCATTTATCTGGATCTGG 57.904 45.455 0.00 0.00 38.69 3.86
2225 2365 4.038402 CCCAAACTGCCATTTATCTGGATC 59.962 45.833 0.00 0.00 38.69 3.36
2226 2366 3.962718 CCCAAACTGCCATTTATCTGGAT 59.037 43.478 0.00 0.00 38.69 3.41
2227 2367 3.364549 CCCAAACTGCCATTTATCTGGA 58.635 45.455 0.00 0.00 38.69 3.86
2228 2368 2.159057 GCCCAAACTGCCATTTATCTGG 60.159 50.000 0.00 0.00 39.45 3.86
2229 2369 2.762327 AGCCCAAACTGCCATTTATCTG 59.238 45.455 0.00 0.00 0.00 2.90
2232 2372 2.539302 ACAGCCCAAACTGCCATTTAT 58.461 42.857 0.00 0.00 41.60 1.40
2233 2373 2.008242 ACAGCCCAAACTGCCATTTA 57.992 45.000 0.00 0.00 41.60 1.40
2234 2374 1.618343 GTACAGCCCAAACTGCCATTT 59.382 47.619 0.00 0.00 41.60 2.32
2236 2376 0.405585 AGTACAGCCCAAACTGCCAT 59.594 50.000 0.00 0.00 41.60 4.40
2273 2490 2.299297 CCGTAAAGGGAGAGTCAAGTGT 59.701 50.000 0.00 0.00 35.97 3.55
2275 2492 2.299297 CACCGTAAAGGGAGAGTCAAGT 59.701 50.000 0.00 0.00 46.96 3.16
2279 2496 4.732672 ATAACACCGTAAAGGGAGAGTC 57.267 45.455 0.00 0.00 46.96 3.36
2292 2509 6.578020 TTGCTAAGATAACGAATAACACCG 57.422 37.500 0.00 0.00 0.00 4.94
2299 2516 9.450807 GTTTATGCAATTGCTAAGATAACGAAT 57.549 29.630 29.37 13.21 42.66 3.34
2302 2519 9.586150 CTAGTTTATGCAATTGCTAAGATAACG 57.414 33.333 29.37 8.97 42.66 3.18
2311 2723 6.543831 CCTACTTCCTAGTTTATGCAATTGCT 59.456 38.462 29.37 17.65 37.61 3.91
2314 2726 6.423182 TGCCTACTTCCTAGTTTATGCAATT 58.577 36.000 0.00 0.00 35.78 2.32
2327 2739 1.127343 GATGAGCCTGCCTACTTCCT 58.873 55.000 0.00 0.00 0.00 3.36
2328 2740 0.833287 TGATGAGCCTGCCTACTTCC 59.167 55.000 0.00 0.00 0.00 3.46
2329 2741 2.284190 GTTGATGAGCCTGCCTACTTC 58.716 52.381 0.00 0.00 0.00 3.01
2330 2742 1.630369 TGTTGATGAGCCTGCCTACTT 59.370 47.619 0.00 0.00 0.00 2.24
2348 2760 5.364157 AGAAGTTGAGTAACCAAGAGAGTGT 59.636 40.000 0.00 0.00 37.52 3.55
2351 2763 7.793927 AAAAGAAGTTGAGTAACCAAGAGAG 57.206 36.000 0.00 0.00 37.52 3.20
2352 2764 9.490379 GATAAAAGAAGTTGAGTAACCAAGAGA 57.510 33.333 0.00 0.00 37.52 3.10
2400 2816 2.424601 ACATGCGAATTGCTAAGCACAT 59.575 40.909 0.00 0.00 46.63 3.21
2413 2829 8.560355 AAGGCATATATTTGTATACATGCGAA 57.440 30.769 16.59 5.69 44.46 4.70
2415 2831 8.668353 AGAAAGGCATATATTTGTATACATGCG 58.332 33.333 16.59 1.41 44.46 4.73
2425 2841 7.066163 TGAGACACACAGAAAGGCATATATTTG 59.934 37.037 0.00 0.00 0.00 2.32
2430 2846 4.223700 TCTGAGACACACAGAAAGGCATAT 59.776 41.667 0.00 0.00 40.70 1.78
2456 2872 8.653338 GCACTTAGAATTATGTACAAGACGAAA 58.347 33.333 0.00 0.00 0.00 3.46
2457 2873 8.033038 AGCACTTAGAATTATGTACAAGACGAA 58.967 33.333 0.00 0.00 0.00 3.85
2486 2902 7.332557 TGTTCGTAAGCATCTAATTAAGGGAA 58.667 34.615 0.00 0.00 37.18 3.97
2488 2904 7.548196 TTGTTCGTAAGCATCTAATTAAGGG 57.452 36.000 0.00 0.00 37.18 3.95
2507 2923 5.109903 AGATATCTTACACCGTGCTTGTTC 58.890 41.667 0.00 0.00 0.00 3.18
2510 2926 4.938080 AGAGATATCTTACACCGTGCTTG 58.062 43.478 6.70 0.00 0.00 4.01
2537 2953 7.379750 GGTGTTCATGATATCCTAGTACTTCC 58.620 42.308 0.00 0.00 0.00 3.46
2542 2958 6.620429 TCTGGGTGTTCATGATATCCTAGTA 58.380 40.000 16.94 7.38 0.00 1.82
2543 2959 5.467738 TCTGGGTGTTCATGATATCCTAGT 58.532 41.667 16.94 0.00 0.00 2.57
2544 2960 5.541868 ACTCTGGGTGTTCATGATATCCTAG 59.458 44.000 13.67 13.67 0.00 3.02
2600 3036 6.423905 GCAAGAACACTACAACTCTGTTATGA 59.576 38.462 0.00 0.00 36.96 2.15
2611 3047 3.882888 CCAAGAAGGCAAGAACACTACAA 59.117 43.478 0.00 0.00 0.00 2.41
2632 3068 4.423625 AGTACCAAAGGTATCAGATGCC 57.576 45.455 9.51 9.51 40.54 4.40
2660 3096 6.376018 AGACATAACAACTGAGAGTAGGACTC 59.624 42.308 0.00 0.00 45.38 3.36
2661 3097 6.151985 CAGACATAACAACTGAGAGTAGGACT 59.848 42.308 0.00 0.00 34.07 3.85
2662 3098 6.071840 ACAGACATAACAACTGAGAGTAGGAC 60.072 42.308 0.00 0.00 35.85 3.85
2663 3099 6.010850 ACAGACATAACAACTGAGAGTAGGA 58.989 40.000 0.00 0.00 35.85 2.94
2664 3100 6.274157 ACAGACATAACAACTGAGAGTAGG 57.726 41.667 0.00 0.00 35.85 3.18
2665 3101 7.371159 TCAACAGACATAACAACTGAGAGTAG 58.629 38.462 0.00 0.00 35.85 2.57
2666 3102 7.284919 TCAACAGACATAACAACTGAGAGTA 57.715 36.000 0.00 0.00 35.85 2.59
2667 3103 6.161855 TCAACAGACATAACAACTGAGAGT 57.838 37.500 0.00 0.00 35.85 3.24
2668 3104 6.703607 AGTTCAACAGACATAACAACTGAGAG 59.296 38.462 0.00 0.00 35.85 3.20
2669 3105 6.582636 AGTTCAACAGACATAACAACTGAGA 58.417 36.000 0.00 0.00 35.85 3.27
2670 3106 6.851222 AGTTCAACAGACATAACAACTGAG 57.149 37.500 0.00 0.00 35.85 3.35
2671 3107 6.423905 GCTAGTTCAACAGACATAACAACTGA 59.576 38.462 0.00 0.00 35.85 3.41
2672 3108 6.202762 TGCTAGTTCAACAGACATAACAACTG 59.797 38.462 0.00 0.00 37.62 3.16
2673 3109 6.288294 TGCTAGTTCAACAGACATAACAACT 58.712 36.000 0.00 0.00 0.00 3.16
2674 3110 6.539649 TGCTAGTTCAACAGACATAACAAC 57.460 37.500 0.00 0.00 0.00 3.32
2711 3147 7.797121 TGATGGAGCTAATATAATGTCAGGA 57.203 36.000 0.00 0.00 0.00 3.86
2723 3159 9.866655 TTTTATAAGATGGTTGATGGAGCTAAT 57.133 29.630 0.00 0.00 0.00 1.73
2754 3190 4.044426 GCAGCAAAAGGTTGTAGAAACTG 58.956 43.478 0.00 0.00 37.06 3.16
2757 3193 2.685897 ACGCAGCAAAAGGTTGTAGAAA 59.314 40.909 0.00 0.00 37.06 2.52
2762 3198 3.726291 AATAACGCAGCAAAAGGTTGT 57.274 38.095 0.00 0.00 37.06 3.32
2772 3208 6.359480 ACTTTCAGGTATAAATAACGCAGC 57.641 37.500 0.00 0.00 0.00 5.25
2774 3210 8.036575 AGTGTACTTTCAGGTATAAATAACGCA 58.963 33.333 0.00 0.00 0.00 5.24
2784 3220 9.003658 CAGAATTTTGAGTGTACTTTCAGGTAT 57.996 33.333 0.00 0.00 0.00 2.73
2785 3221 8.208224 TCAGAATTTTGAGTGTACTTTCAGGTA 58.792 33.333 0.00 0.00 0.00 3.08
2786 3222 7.012421 GTCAGAATTTTGAGTGTACTTTCAGGT 59.988 37.037 0.00 0.00 0.00 4.00
2787 3223 7.227512 AGTCAGAATTTTGAGTGTACTTTCAGG 59.772 37.037 5.56 0.00 29.75 3.86
2801 3237 6.572519 TCCCAAGAAAACAGTCAGAATTTTG 58.427 36.000 0.00 0.00 0.00 2.44
2803 3239 6.381133 ACTTCCCAAGAAAACAGTCAGAATTT 59.619 34.615 0.00 0.00 0.00 1.82
2805 3241 5.449553 ACTTCCCAAGAAAACAGTCAGAAT 58.550 37.500 0.00 0.00 0.00 2.40
2806 3242 4.855340 ACTTCCCAAGAAAACAGTCAGAA 58.145 39.130 0.00 0.00 0.00 3.02
2808 3244 4.734695 GCAACTTCCCAAGAAAACAGTCAG 60.735 45.833 0.00 0.00 0.00 3.51
2809 3245 3.130340 GCAACTTCCCAAGAAAACAGTCA 59.870 43.478 0.00 0.00 0.00 3.41
2810 3246 3.130340 TGCAACTTCCCAAGAAAACAGTC 59.870 43.478 0.00 0.00 0.00 3.51
2811 3247 3.096092 TGCAACTTCCCAAGAAAACAGT 58.904 40.909 0.00 0.00 0.00 3.55
2812 3248 3.799281 TGCAACTTCCCAAGAAAACAG 57.201 42.857 0.00 0.00 0.00 3.16
2813 3249 3.259374 TGTTGCAACTTCCCAAGAAAACA 59.741 39.130 28.61 2.45 0.00 2.83
2814 3250 3.855858 TGTTGCAACTTCCCAAGAAAAC 58.144 40.909 28.61 0.00 0.00 2.43
2815 3251 4.751767 ATGTTGCAACTTCCCAAGAAAA 57.248 36.364 28.61 5.74 0.00 2.29
2885 3329 2.771943 TCCACTCTTCATGTACCCCATC 59.228 50.000 0.00 0.00 0.00 3.51
2891 3335 3.055819 TCTGGCTTCCACTCTTCATGTAC 60.056 47.826 0.00 0.00 0.00 2.90
2903 3347 2.205022 CCAATGACTTCTGGCTTCCA 57.795 50.000 0.00 0.00 0.00 3.53
3016 3472 3.825328 ACATGGCTGATGAAGGAATACC 58.175 45.455 0.00 0.00 35.80 2.73
3030 3486 1.039856 GGACCACACAAAACATGGCT 58.960 50.000 0.00 0.00 36.96 4.75
3057 3513 3.316029 TCGATGCAATTCCATAGCAAAGG 59.684 43.478 0.00 0.00 42.15 3.11
3065 3521 3.272574 AGAGTGTCGATGCAATTCCAT 57.727 42.857 0.00 0.00 0.00 3.41
3066 3522 2.768253 AGAGTGTCGATGCAATTCCA 57.232 45.000 0.00 0.00 0.00 3.53
3082 3538 4.479993 CAGCCGGCAGGGGAAGAG 62.480 72.222 31.54 2.29 38.20 2.85
3107 3567 3.916761 TGATGCAAAGCCAAGAAACATC 58.083 40.909 0.00 0.00 34.45 3.06
3199 3660 0.106918 AAAGAAGGGACACAACGCCA 60.107 50.000 0.00 0.00 0.00 5.69
3205 3666 1.850345 ACCAAGGAAAGAAGGGACACA 59.150 47.619 0.00 0.00 0.00 3.72
3275 3736 4.188247 TGGTAACTACACTGACTGCATC 57.812 45.455 0.00 0.00 37.61 3.91
3276 3737 4.826274 ATGGTAACTACACTGACTGCAT 57.174 40.909 0.00 0.00 37.61 3.96
3288 3749 3.962063 TCCCGAAGTGCATATGGTAACTA 59.038 43.478 4.56 0.00 37.61 2.24
3289 3750 2.769663 TCCCGAAGTGCATATGGTAACT 59.230 45.455 4.56 0.00 37.61 2.24
3304 3765 3.228453 ACTCACAAGTCTAACTCCCGAA 58.772 45.455 0.00 0.00 0.00 4.30
3307 3768 4.875561 AGAACTCACAAGTCTAACTCCC 57.124 45.455 0.00 0.00 33.48 4.30
3342 3804 1.070577 CCAGACAACTGCTTCGAAACG 60.071 52.381 0.00 0.00 42.25 3.60
3371 3833 0.317519 CCAAAGGTCCGAAAACACGC 60.318 55.000 0.00 0.00 0.00 5.34
3372 3834 1.018910 ACCAAAGGTCCGAAAACACG 58.981 50.000 0.00 0.00 0.00 4.49
3404 3871 4.567558 AGTTCAACGACAATGTAACACGAA 59.432 37.500 0.00 0.00 0.00 3.85
3435 3903 5.547465 CCCATACACACTTCACTAGAACAA 58.453 41.667 0.00 0.00 0.00 2.83
3450 3927 0.546122 TCCACCATCAGCCCATACAC 59.454 55.000 0.00 0.00 0.00 2.90
3460 3937 7.181665 TCCCAAAATTATTGATTTCCACCATCA 59.818 33.333 3.00 0.00 36.96 3.07
3484 3961 2.354821 GCCATTCACATACGGTCTTTCC 59.645 50.000 0.00 0.00 0.00 3.13
3488 3965 0.821517 TCGCCATTCACATACGGTCT 59.178 50.000 0.00 0.00 0.00 3.85
3489 3966 0.928229 GTCGCCATTCACATACGGTC 59.072 55.000 0.00 0.00 0.00 4.79
3490 3967 0.535335 AGTCGCCATTCACATACGGT 59.465 50.000 0.00 0.00 0.00 4.83
3492 3969 5.388475 GCTATAAAGTCGCCATTCACATACG 60.388 44.000 0.00 0.00 0.00 3.06
3493 3970 5.465390 TGCTATAAAGTCGCCATTCACATAC 59.535 40.000 0.00 0.00 0.00 2.39
3494 3971 5.606505 TGCTATAAAGTCGCCATTCACATA 58.393 37.500 0.00 0.00 0.00 2.29
3495 3972 4.450976 TGCTATAAAGTCGCCATTCACAT 58.549 39.130 0.00 0.00 0.00 3.21
3527 4004 0.039527 GGGAAATGCAACACGGTCAC 60.040 55.000 0.00 0.00 0.00 3.67
3545 4022 3.872459 AATCATAGAGCAAAGAGGGGG 57.128 47.619 0.00 0.00 0.00 5.40
3546 4023 5.559148 ACTAATCATAGAGCAAAGAGGGG 57.441 43.478 0.00 0.00 33.15 4.79
3547 4024 6.586344 TCAACTAATCATAGAGCAAAGAGGG 58.414 40.000 0.00 0.00 33.15 4.30
3548 4025 7.930325 TCATCAACTAATCATAGAGCAAAGAGG 59.070 37.037 0.00 0.00 33.15 3.69
3549 4026 8.883954 TCATCAACTAATCATAGAGCAAAGAG 57.116 34.615 0.00 0.00 33.15 2.85
3570 4047 6.805271 TGACGTAGCTACTTTTACACTTCATC 59.195 38.462 21.20 0.00 0.00 2.92
3603 4080 6.018669 GTGAAAGCTACTTGGATCCGATTAAG 60.019 42.308 7.39 7.62 0.00 1.85
3648 4125 2.355837 TCAACGCAGACGGAGCAC 60.356 61.111 0.00 0.00 46.04 4.40
3652 4129 0.315886 TTAAGCTCAACGCAGACGGA 59.684 50.000 0.00 0.00 46.04 4.69
3655 4132 0.438830 CGGTTAAGCTCAACGCAGAC 59.561 55.000 2.76 0.00 42.61 3.51
3670 4147 2.428622 CCGGTTCCAGGAACGGTT 59.571 61.111 28.96 0.00 42.78 4.44
3679 4156 1.507140 AATAGATCAGGCCGGTTCCA 58.493 50.000 1.90 0.00 0.00 3.53
3691 4168 7.044052 GCCAATACGAAGCAAACAAAATAGATC 60.044 37.037 0.00 0.00 0.00 2.75
3695 4172 6.019779 AGCCAATACGAAGCAAACAAAATA 57.980 33.333 0.00 0.00 0.00 1.40
3710 4187 1.940613 CGCTCCTACCAAAGCCAATAC 59.059 52.381 0.00 0.00 35.00 1.89
3728 4205 3.564027 CGCAATCCCGAGGAACGC 61.564 66.667 0.00 2.67 41.07 4.84
3730 4207 2.750888 GCACGCAATCCCGAGGAAC 61.751 63.158 0.00 0.00 34.34 3.62
3735 4212 3.950794 GACCTGCACGCAATCCCGA 62.951 63.158 0.00 0.00 0.00 5.14
3736 4213 3.499737 GACCTGCACGCAATCCCG 61.500 66.667 0.00 0.00 0.00 5.14
3738 4215 0.955428 TCAAGACCTGCACGCAATCC 60.955 55.000 0.00 0.00 0.00 3.01
3739 4216 1.063174 GATCAAGACCTGCACGCAATC 59.937 52.381 0.00 0.00 0.00 2.67
3740 4217 1.089920 GATCAAGACCTGCACGCAAT 58.910 50.000 0.00 0.00 0.00 3.56
3741 4218 0.035317 AGATCAAGACCTGCACGCAA 59.965 50.000 0.00 0.00 0.00 4.85
3743 4220 0.445436 CAAGATCAAGACCTGCACGC 59.555 55.000 0.00 0.00 0.00 5.34
3744 4221 1.728971 GACAAGATCAAGACCTGCACG 59.271 52.381 0.00 0.00 0.00 5.34
3745 4222 2.771089 TGACAAGATCAAGACCTGCAC 58.229 47.619 0.00 0.00 33.02 4.57
3768 4252 0.320858 TTGTTTATCCGGCGCTGTCA 60.321 50.000 16.49 0.84 0.00 3.58
3769 4253 0.373716 CTTGTTTATCCGGCGCTGTC 59.626 55.000 16.49 0.00 0.00 3.51
3770 4254 0.321298 ACTTGTTTATCCGGCGCTGT 60.321 50.000 16.49 0.00 0.00 4.40
3771 4255 0.096976 CACTTGTTTATCCGGCGCTG 59.903 55.000 9.96 9.96 0.00 5.18
3815 4299 1.355381 TGGTGAGCCATTCATGAAGGT 59.645 47.619 18.05 9.03 40.46 3.50
3830 4314 1.332195 CTCTCTGGGCGATATGGTGA 58.668 55.000 0.00 0.00 0.00 4.02
3860 4356 1.798813 GACGGTGCTAAGTTTGTGGAG 59.201 52.381 0.00 0.00 0.00 3.86
3863 4359 1.455786 CTCGACGGTGCTAAGTTTGTG 59.544 52.381 0.00 0.00 0.00 3.33
3877 4373 1.154131 CTGAGCAGGACACTCGACG 60.154 63.158 0.00 0.00 36.94 5.12
3878 4374 0.109504 GTCTGAGCAGGACACTCGAC 60.110 60.000 0.00 0.00 36.94 4.20
3904 4400 3.574614 ACGCCAGTTGCAAAATTATGTC 58.425 40.909 0.00 0.00 41.33 3.06
3905 4401 3.658757 ACGCCAGTTGCAAAATTATGT 57.341 38.095 0.00 0.00 41.33 2.29
3951 4466 2.420687 GGTGCCTCCGAGAAGATGATTT 60.421 50.000 0.00 0.00 0.00 2.17
3965 4480 1.004440 AAAGAGCGTCTGGTGCCTC 60.004 57.895 0.00 0.00 0.00 4.70
3977 4492 3.255642 TGGACTGTAATTTGGCAAAGAGC 59.744 43.478 18.61 10.48 44.65 4.09
4001 4516 4.680237 TCGTGGAAGCACGCCCTG 62.680 66.667 0.00 0.00 46.91 4.45
4011 4526 2.293170 TGCAACTGTTGATTCGTGGAA 58.707 42.857 23.81 0.00 0.00 3.53
4016 4531 6.571154 CGATATGTAATGCAACTGTTGATTCG 59.429 38.462 23.81 13.48 0.00 3.34
4027 4542 1.790043 CGCGTCCGATATGTAATGCAA 59.210 47.619 0.00 0.00 36.29 4.08
4060 4575 1.815421 CGGAACCGCTGGAAGATGG 60.815 63.158 0.00 0.00 37.09 3.51
4115 4630 6.183360 GCAACAACGAGAGAATGGAATATTGA 60.183 38.462 0.00 0.00 0.00 2.57
4132 4921 4.152223 TCTGACTTCATACATGCAACAACG 59.848 41.667 0.00 0.00 0.00 4.10
4137 4926 4.002982 GGTGTCTGACTTCATACATGCAA 58.997 43.478 9.51 0.00 35.80 4.08
4162 4951 5.763204 ACTACAAAGTACAAATCCACCACAG 59.237 40.000 0.00 0.00 32.84 3.66
4171 4960 8.506437 CATGTGTGATCACTACAAAGTACAAAT 58.494 33.333 25.55 8.05 44.14 2.32
4178 4967 5.469760 TCCAACATGTGTGATCACTACAAAG 59.530 40.000 25.55 21.95 44.14 2.77
4179 4968 5.238432 GTCCAACATGTGTGATCACTACAAA 59.762 40.000 25.55 2.94 44.14 2.83
4180 4969 4.754618 GTCCAACATGTGTGATCACTACAA 59.245 41.667 25.55 9.66 44.14 2.41
4181 4970 4.314961 GTCCAACATGTGTGATCACTACA 58.685 43.478 25.55 24.58 44.14 2.74
4182 4971 3.367932 CGTCCAACATGTGTGATCACTAC 59.632 47.826 25.55 20.48 44.14 2.73
4183 4972 3.584834 CGTCCAACATGTGTGATCACTA 58.415 45.455 25.55 15.35 44.14 2.74
4184 4973 2.416747 CGTCCAACATGTGTGATCACT 58.583 47.619 25.55 3.73 44.14 3.41
4191 4980 2.555123 GGATGCGTCCAACATGTGT 58.445 52.632 20.55 0.00 44.42 3.72
4207 4996 1.835531 GGTTACCGAGGGATTTCAGGA 59.164 52.381 0.00 0.00 0.00 3.86
4214 5003 4.905456 TCAGATAATTGGTTACCGAGGGAT 59.095 41.667 0.00 0.00 0.00 3.85
4223 5012 6.095300 CACATGCTTGGTCAGATAATTGGTTA 59.905 38.462 4.44 0.00 0.00 2.85
4232 5021 2.238144 AGCTACACATGCTTGGTCAGAT 59.762 45.455 4.44 0.00 37.52 2.90
4261 5050 1.666209 CCTGGTTAAGCGCATTGGGG 61.666 60.000 11.47 0.00 0.00 4.96
4276 5065 3.432326 GGACATACTAAGAGTTGGCCTGG 60.432 52.174 3.32 0.00 34.03 4.45
4277 5066 3.432326 GGGACATACTAAGAGTTGGCCTG 60.432 52.174 3.32 0.00 35.83 4.85
4310 5099 1.068753 CAGGGTATGGCGCTCTCTG 59.931 63.158 7.64 7.60 38.41 3.35
4345 5134 0.674895 AGATGTCCTTTCGGCTGTGC 60.675 55.000 0.00 0.00 0.00 4.57
4347 5136 0.976641 TCAGATGTCCTTTCGGCTGT 59.023 50.000 0.00 0.00 0.00 4.40
4352 5141 2.350522 CCCACTTCAGATGTCCTTTCG 58.649 52.381 0.00 0.00 0.00 3.46
4370 5159 4.479786 TTTGCAGGCAATTTATTACCCC 57.520 40.909 7.62 0.00 35.70 4.95
4380 5169 3.756933 AGTTCACATTTTGCAGGCAAT 57.243 38.095 7.62 0.00 35.70 3.56
4420 5209 8.260114 CCCAGAAAGCTAAATAATGAATTTGGT 58.740 33.333 0.00 0.00 38.09 3.67
4421 5210 8.260114 ACCCAGAAAGCTAAATAATGAATTTGG 58.740 33.333 0.00 0.00 38.29 3.28
4422 5211 9.090692 CACCCAGAAAGCTAAATAATGAATTTG 57.909 33.333 0.00 0.00 38.29 2.32
4423 5212 7.765819 GCACCCAGAAAGCTAAATAATGAATTT 59.234 33.333 0.00 0.00 40.87 1.82
4424 5213 7.093377 TGCACCCAGAAAGCTAAATAATGAATT 60.093 33.333 0.00 0.00 0.00 2.17
4425 5214 6.380846 TGCACCCAGAAAGCTAAATAATGAAT 59.619 34.615 0.00 0.00 0.00 2.57
4426 5215 5.714333 TGCACCCAGAAAGCTAAATAATGAA 59.286 36.000 0.00 0.00 0.00 2.57
4427 5216 5.260424 TGCACCCAGAAAGCTAAATAATGA 58.740 37.500 0.00 0.00 0.00 2.57
4428 5217 5.581126 TGCACCCAGAAAGCTAAATAATG 57.419 39.130 0.00 0.00 0.00 1.90
4429 5218 5.127682 CCTTGCACCCAGAAAGCTAAATAAT 59.872 40.000 0.00 0.00 0.00 1.28
4430 5219 4.462483 CCTTGCACCCAGAAAGCTAAATAA 59.538 41.667 0.00 0.00 0.00 1.40
4431 5220 4.016444 CCTTGCACCCAGAAAGCTAAATA 58.984 43.478 0.00 0.00 0.00 1.40
4432 5221 2.827921 CCTTGCACCCAGAAAGCTAAAT 59.172 45.455 0.00 0.00 0.00 1.40
4433 5222 2.158534 TCCTTGCACCCAGAAAGCTAAA 60.159 45.455 0.00 0.00 0.00 1.85
4434 5223 1.423541 TCCTTGCACCCAGAAAGCTAA 59.576 47.619 0.00 0.00 0.00 3.09
4435 5224 1.064003 TCCTTGCACCCAGAAAGCTA 58.936 50.000 0.00 0.00 0.00 3.32
4436 5225 0.185901 TTCCTTGCACCCAGAAAGCT 59.814 50.000 0.00 0.00 0.00 3.74
4437 5226 1.039856 TTTCCTTGCACCCAGAAAGC 58.960 50.000 0.00 0.00 0.00 3.51
4438 5227 2.310538 AGTTTCCTTGCACCCAGAAAG 58.689 47.619 0.00 0.00 0.00 2.62
4439 5228 2.452600 AGTTTCCTTGCACCCAGAAA 57.547 45.000 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.