Multiple sequence alignment - TraesCS2B01G532900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G532900 chr2B 100.000 5784 0 0 1 5784 729137670 729131887 0.000000e+00 10682.0
1 TraesCS2B01G532900 chr2D 88.575 2871 119 82 483 3222 599791928 599789136 0.000000e+00 3291.0
2 TraesCS2B01G532900 chr2D 84.741 1966 141 65 3518 5402 599788847 599786960 0.000000e+00 1821.0
3 TraesCS2B01G532900 chr2D 86.280 328 24 10 55 378 599794903 599794593 2.580000e-88 337.0
4 TraesCS2B01G532900 chr2D 79.303 488 70 24 2 471 599792389 599791915 4.350000e-81 313.0
5 TraesCS2B01G532900 chr2D 89.904 208 13 5 3266 3472 599789135 599788935 1.600000e-65 261.0
6 TraesCS2B01G532900 chr2D 98.148 108 2 0 5677 5784 599785218 599785111 7.650000e-44 189.0
7 TraesCS2B01G532900 chr2A 85.678 1948 105 68 107 2019 733519759 733517951 0.000000e+00 1892.0
8 TraesCS2B01G532900 chr2A 86.391 1477 93 43 2051 3472 733517951 733516528 0.000000e+00 1515.0
9 TraesCS2B01G532900 chr2A 83.789 1462 117 53 3517 4927 733516441 733515049 0.000000e+00 1277.0
10 TraesCS2B01G532900 chr2A 84.437 861 49 31 4926 5758 733514725 733513922 0.000000e+00 769.0
11 TraesCS2B01G532900 chr2A 86.829 205 11 8 5580 5784 733494849 733494661 1.260000e-51 215.0
12 TraesCS2B01G532900 chr2A 92.593 54 1 2 5412 5463 663740737 663740789 2.240000e-09 75.0
13 TraesCS2B01G532900 chr4A 88.843 242 17 6 1353 1592 705377251 705377018 7.330000e-74 289.0
14 TraesCS2B01G532900 chr4A 96.330 109 4 0 1662 1770 705377007 705376899 4.600000e-41 180.0
15 TraesCS2B01G532900 chr4A 80.556 108 18 3 1698 1803 549817385 549817279 4.800000e-11 80.5
16 TraesCS2B01G532900 chr4B 91.163 215 13 3 1360 1573 417038378 417038587 2.640000e-73 287.0
17 TraesCS2B01G532900 chr7D 82.171 258 40 6 1305 1559 544998639 544998385 3.510000e-52 217.0
18 TraesCS2B01G532900 chr7D 90.647 139 13 0 2116 2254 544997964 544997826 9.900000e-43 185.0
19 TraesCS2B01G532900 chr7D 82.353 119 19 2 2111 2228 461091952 461092069 1.030000e-17 102.0
20 TraesCS2B01G532900 chr7A 92.105 152 11 1 1662 1813 465377028 465377178 4.540000e-51 213.0
21 TraesCS2B01G532900 chr7A 89.928 139 14 0 2116 2254 626885210 626885072 4.600000e-41 180.0
22 TraesCS2B01G532900 chr7A 76.923 325 55 15 1659 1974 626885521 626885208 3.580000e-37 167.0
23 TraesCS2B01G532900 chr6D 79.268 328 33 18 1662 1966 468063870 468064185 4.570000e-46 196.0
24 TraesCS2B01G532900 chr6D 97.727 44 1 0 5417 5460 356024130 356024087 6.210000e-10 76.8
25 TraesCS2B01G532900 chr7B 91.367 139 12 0 2116 2254 588383159 588383021 2.130000e-44 191.0
26 TraesCS2B01G532900 chr7B 77.370 327 51 15 1659 1974 588383471 588383157 7.710000e-39 172.0
27 TraesCS2B01G532900 chr7B 82.353 119 19 2 2111 2228 483533496 483533613 1.030000e-17 102.0
28 TraesCS2B01G532900 chr7B 97.778 45 1 0 5416 5460 710732048 710732004 1.730000e-10 78.7
29 TraesCS2B01G532900 chr6B 82.143 140 22 3 1454 1591 655060065 655059927 3.660000e-22 117.0
30 TraesCS2B01G532900 chr6B 83.186 113 7 1 1701 1813 655059901 655059801 6.170000e-15 93.5
31 TraesCS2B01G532900 chrUn 97.778 45 1 0 5416 5460 132053493 132053537 1.730000e-10 78.7
32 TraesCS2B01G532900 chr5B 97.778 45 1 0 5416 5460 671350713 671350757 1.730000e-10 78.7
33 TraesCS2B01G532900 chr3A 95.833 48 2 0 5416 5463 91121819 91121772 1.730000e-10 78.7
34 TraesCS2B01G532900 chr1B 97.778 45 1 0 5416 5460 546704348 546704304 1.730000e-10 78.7
35 TraesCS2B01G532900 chr1A 95.833 48 2 0 5416 5463 436479663 436479616 1.730000e-10 78.7
36 TraesCS2B01G532900 chr5D 89.474 57 4 2 5416 5471 476192417 476192362 2.890000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G532900 chr2B 729131887 729137670 5783 True 10682.000000 10682 100.000000 1 5784 1 chr2B.!!$R1 5783
1 TraesCS2B01G532900 chr2D 599785111 599794903 9792 True 1035.333333 3291 87.825167 2 5784 6 chr2D.!!$R1 5782
2 TraesCS2B01G532900 chr2A 733513922 733519759 5837 True 1363.250000 1892 85.073750 107 5758 4 chr2A.!!$R2 5651
3 TraesCS2B01G532900 chr7D 544997826 544998639 813 True 201.000000 217 86.409000 1305 2254 2 chr7D.!!$R1 949

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
186 187 0.105194 TCTATCCCCTCCGCCATGAA 60.105 55.0 0.00 0.00 0.00 2.57 F
1214 3857 0.040781 AATTGACGCCGGTTTGTTCG 60.041 50.0 1.90 0.00 0.00 3.95 F
2546 5256 0.035881 TCTTCCTCTGCACTTGCTGG 59.964 55.0 8.09 5.45 42.66 4.85 F
3997 6849 0.033920 GTTAGGACAACGAACCGGGT 59.966 55.0 6.32 0.00 0.00 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1814 4463 0.175531 GAAGAGGAGGAGCAGAGTGC 59.824 60.0 0.00 0.00 45.46 4.40 R
2593 5303 0.239347 ATGCTGCAAGTTTCGTGCTC 59.761 50.0 6.36 2.67 42.69 4.26 R
4369 7265 0.096281 CAGTCGAGTCTCTGCGAGTC 59.904 60.0 0.00 0.00 38.04 3.36 R
5531 9679 0.033405 CTACTTCCCCCTCCGTCTCA 60.033 60.0 0.00 0.00 0.00 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 5.790547 GCTAAAAGCTTCATCTTACGTCTG 58.209 41.667 0.00 0.00 38.45 3.51
31 32 5.348997 GCTAAAAGCTTCATCTTACGTCTGT 59.651 40.000 0.00 0.00 38.45 3.41
32 33 6.128526 GCTAAAAGCTTCATCTTACGTCTGTT 60.129 38.462 0.00 0.00 38.45 3.16
33 34 7.063074 GCTAAAAGCTTCATCTTACGTCTGTTA 59.937 37.037 0.00 0.00 38.45 2.41
34 35 6.952935 AAAGCTTCATCTTACGTCTGTTAG 57.047 37.500 0.00 0.00 0.00 2.34
35 36 4.425520 AGCTTCATCTTACGTCTGTTAGC 58.574 43.478 0.00 0.92 0.00 3.09
36 37 4.158764 AGCTTCATCTTACGTCTGTTAGCT 59.841 41.667 0.00 0.00 0.00 3.32
37 38 4.501198 GCTTCATCTTACGTCTGTTAGCTC 59.499 45.833 0.00 0.00 0.00 4.09
38 39 5.677598 GCTTCATCTTACGTCTGTTAGCTCT 60.678 44.000 0.00 0.00 0.00 4.09
39 40 6.458478 GCTTCATCTTACGTCTGTTAGCTCTA 60.458 42.308 0.00 0.00 0.00 2.43
40 41 6.360844 TCATCTTACGTCTGTTAGCTCTAC 57.639 41.667 0.00 0.00 0.00 2.59
41 42 5.296283 TCATCTTACGTCTGTTAGCTCTACC 59.704 44.000 0.00 0.00 0.00 3.18
42 43 4.582869 TCTTACGTCTGTTAGCTCTACCA 58.417 43.478 0.00 0.00 0.00 3.25
43 44 4.634883 TCTTACGTCTGTTAGCTCTACCAG 59.365 45.833 0.00 0.00 0.00 4.00
51 52 2.409651 GCTCTACCAGCGACGGAG 59.590 66.667 0.00 0.00 38.76 4.63
52 53 2.409651 CTCTACCAGCGACGGAGC 59.590 66.667 0.00 0.00 37.41 4.70
53 54 3.127352 CTCTACCAGCGACGGAGCC 62.127 68.421 0.00 0.00 38.01 4.70
54 55 3.449227 CTACCAGCGACGGAGCCA 61.449 66.667 0.00 0.00 38.01 4.75
55 56 2.992689 TACCAGCGACGGAGCCAA 60.993 61.111 0.00 0.00 38.01 4.52
56 57 2.501223 CTACCAGCGACGGAGCCAAA 62.501 60.000 0.00 0.00 38.01 3.28
57 58 2.775032 TACCAGCGACGGAGCCAAAC 62.775 60.000 0.00 0.00 38.01 2.93
58 59 3.777925 CAGCGACGGAGCCAAACG 61.778 66.667 0.00 0.00 38.01 3.60
89 90 4.534401 GGCACCAGGTACGGAATC 57.466 61.111 0.00 0.00 0.00 2.52
104 105 1.933853 GGAATCATGTCTCGAAACCCG 59.066 52.381 0.00 0.00 40.25 5.28
139 140 4.082523 CACGCATGGGAGACGGGT 62.083 66.667 17.76 0.00 0.00 5.28
160 161 4.056125 CGGTCACGCTCAGGCTCA 62.056 66.667 0.00 0.00 36.09 4.26
176 177 0.471591 CTCAGCCAGCTCTATCCCCT 60.472 60.000 0.00 0.00 0.00 4.79
178 179 1.152139 AGCCAGCTCTATCCCCTCC 60.152 63.158 0.00 0.00 0.00 4.30
179 180 2.578714 GCCAGCTCTATCCCCTCCG 61.579 68.421 0.00 0.00 0.00 4.63
181 182 2.203714 AGCTCTATCCCCTCCGCC 60.204 66.667 0.00 0.00 0.00 6.13
182 183 2.524394 GCTCTATCCCCTCCGCCA 60.524 66.667 0.00 0.00 0.00 5.69
183 184 1.915769 GCTCTATCCCCTCCGCCAT 60.916 63.158 0.00 0.00 0.00 4.40
184 185 1.978473 CTCTATCCCCTCCGCCATG 59.022 63.158 0.00 0.00 0.00 3.66
186 187 0.105194 TCTATCCCCTCCGCCATGAA 60.105 55.000 0.00 0.00 0.00 2.57
187 188 0.322975 CTATCCCCTCCGCCATGAAG 59.677 60.000 0.00 0.00 0.00 3.02
188 189 0.399949 TATCCCCTCCGCCATGAAGT 60.400 55.000 0.00 0.00 0.00 3.01
189 190 1.700042 ATCCCCTCCGCCATGAAGTC 61.700 60.000 0.00 0.00 0.00 3.01
252 2830 4.910722 CATTCATTGGCGCGCCCG 62.911 66.667 44.42 32.19 35.87 6.13
271 2855 2.046023 CCGGCAATCAGACCAGCA 60.046 61.111 0.00 0.00 0.00 4.41
332 2916 2.108976 CCACCTGTGCGTGTCACT 59.891 61.111 0.65 0.00 45.81 3.41
334 2918 1.227234 CACCTGTGCGTGTCACTCA 60.227 57.895 0.65 0.00 45.81 3.41
339 2923 2.106131 TGCGTGTCACTCAGCGTT 59.894 55.556 0.65 0.00 0.00 4.84
340 2924 2.237066 TGCGTGTCACTCAGCGTTG 61.237 57.895 0.65 0.00 0.00 4.10
341 2925 2.546321 CGTGTCACTCAGCGTTGC 59.454 61.111 0.65 0.00 0.00 4.17
342 2926 2.546321 GTGTCACTCAGCGTTGCG 59.454 61.111 0.00 0.00 0.00 4.85
343 2927 2.106131 TGTCACTCAGCGTTGCGT 59.894 55.556 0.00 0.00 0.00 5.24
344 2928 2.237066 TGTCACTCAGCGTTGCGTG 61.237 57.895 15.24 15.24 40.53 5.34
346 2930 2.661537 CACTCAGCGTTGCGTGGA 60.662 61.111 13.80 0.00 36.59 4.02
347 2931 2.029288 CACTCAGCGTTGCGTGGAT 61.029 57.895 13.80 0.00 36.59 3.41
349 2933 1.737735 CTCAGCGTTGCGTGGATGA 60.738 57.895 0.00 0.00 0.00 2.92
350 2934 1.291184 CTCAGCGTTGCGTGGATGAA 61.291 55.000 0.00 0.00 0.00 2.57
378 2962 3.442625 ACGAGGGCGATCGATGATAATAA 59.557 43.478 21.57 0.00 45.56 1.40
382 2966 5.844004 AGGGCGATCGATGATAATAATACC 58.156 41.667 21.57 5.11 0.00 2.73
383 2967 5.598830 AGGGCGATCGATGATAATAATACCT 59.401 40.000 21.57 3.49 0.00 3.08
386 2970 7.280205 GGGCGATCGATGATAATAATACCTTTT 59.720 37.037 21.57 0.00 0.00 2.27
387 2971 8.116753 GGCGATCGATGATAATAATACCTTTTG 58.883 37.037 21.57 0.00 0.00 2.44
389 2973 9.366216 CGATCGATGATAATAATACCTTTTGGA 57.634 33.333 10.26 0.00 44.07 3.53
402 2987 8.435931 AATACCTTTTGGATTAAAAAGAGGCT 57.564 30.769 10.24 0.00 45.85 4.58
473 3058 6.910972 CCGGTACAAGAAAGAAAGAAAGAAAC 59.089 38.462 0.00 0.00 0.00 2.78
475 3060 7.966204 CGGTACAAGAAAGAAAGAAAGAAACAA 59.034 33.333 0.00 0.00 0.00 2.83
476 3061 9.634163 GGTACAAGAAAGAAAGAAAGAAACAAA 57.366 29.630 0.00 0.00 0.00 2.83
499 3084 9.525409 CAAACAAACAAAGAAAGAAGAGATCAT 57.475 29.630 0.00 0.00 0.00 2.45
501 3086 9.525409 AACAAACAAAGAAAGAAGAGATCATTG 57.475 29.630 0.00 0.00 0.00 2.82
502 3087 8.139989 ACAAACAAAGAAAGAAGAGATCATTGG 58.860 33.333 0.00 0.00 0.00 3.16
503 3088 6.264841 ACAAAGAAAGAAGAGATCATTGGC 57.735 37.500 0.00 0.00 0.00 4.52
504 3089 5.184671 ACAAAGAAAGAAGAGATCATTGGCC 59.815 40.000 0.00 0.00 0.00 5.36
555 3140 4.671590 TCGTCCTGTCCCGCCTCA 62.672 66.667 0.00 0.00 0.00 3.86
601 3189 1.435515 GAGCCTTCTCTCGCATCGT 59.564 57.895 0.00 0.00 36.42 3.73
603 3191 1.268352 GAGCCTTCTCTCGCATCGTAT 59.732 52.381 0.00 0.00 36.42 3.06
605 3193 1.957089 CCTTCTCTCGCATCGTATCG 58.043 55.000 0.00 0.00 0.00 2.92
679 3267 2.040359 CCCTCTCCTCCCCTTCCC 60.040 72.222 0.00 0.00 0.00 3.97
717 3316 0.609406 TCTCCCTCCACACTCGTGAG 60.609 60.000 3.74 0.00 46.80 3.51
718 3317 0.896019 CTCCCTCCACACTCGTGAGT 60.896 60.000 3.74 0.00 46.80 3.41
719 3318 0.894184 TCCCTCCACACTCGTGAGTC 60.894 60.000 3.74 0.00 46.80 3.36
720 3319 1.210413 CCTCCACACTCGTGAGTCG 59.790 63.158 3.74 0.00 46.80 4.18
726 3325 0.308068 ACACTCGTGAGTCGTGACTG 59.692 55.000 7.35 0.00 42.66 3.51
744 3343 1.516821 GACTGAGCTGAGCTGAGCG 60.517 63.158 20.79 8.25 43.39 5.03
880 3479 1.518056 TTTCTTGCTTCAGCTGCCCG 61.518 55.000 9.47 0.25 42.66 6.13
904 3503 1.507140 TTCAATGCCCTCGTATCCCT 58.493 50.000 0.00 0.00 0.00 4.20
940 3549 1.424493 CGCTAGCTAGCCAAGTGTGC 61.424 60.000 34.27 12.28 46.34 4.57
1193 3828 2.296190 GCTTCCACCCAGGTAAAAACAG 59.704 50.000 0.00 0.00 39.02 3.16
1199 3838 4.262420 CCACCCAGGTAAAAACAGGAATTG 60.262 45.833 0.00 0.00 0.00 2.32
1214 3857 0.040781 AATTGACGCCGGTTTGTTCG 60.041 50.000 1.90 0.00 0.00 3.95
1255 3898 2.036217 TCTTTCTTTCTCCGGCGTTGTA 59.964 45.455 6.01 0.00 0.00 2.41
1257 3900 0.963962 TCTTTCTCCGGCGTTGTAGT 59.036 50.000 6.01 0.00 0.00 2.73
1277 3920 7.094631 TGTAGTGCGTTACATACAGAGATTTT 58.905 34.615 0.00 0.00 0.00 1.82
1278 3921 8.245491 TGTAGTGCGTTACATACAGAGATTTTA 58.755 33.333 0.00 0.00 0.00 1.52
1279 3922 9.245962 GTAGTGCGTTACATACAGAGATTTTAT 57.754 33.333 0.00 0.00 0.00 1.40
1280 3923 8.131455 AGTGCGTTACATACAGAGATTTTATG 57.869 34.615 0.00 0.00 0.00 1.90
1281 3924 7.224753 AGTGCGTTACATACAGAGATTTTATGG 59.775 37.037 0.00 0.00 0.00 2.74
1282 3925 6.481976 TGCGTTACATACAGAGATTTTATGGG 59.518 38.462 0.00 0.00 0.00 4.00
1283 3926 6.482308 GCGTTACATACAGAGATTTTATGGGT 59.518 38.462 0.00 0.00 0.00 4.51
1284 3927 7.012044 GCGTTACATACAGAGATTTTATGGGTT 59.988 37.037 0.00 0.00 0.00 4.11
1286 3929 6.699575 ACATACAGAGATTTTATGGGTTGC 57.300 37.500 0.00 0.00 0.00 4.17
1287 3930 5.296780 ACATACAGAGATTTTATGGGTTGCG 59.703 40.000 0.00 0.00 0.00 4.85
1288 3931 2.423538 ACAGAGATTTTATGGGTTGCGC 59.576 45.455 0.00 0.00 0.00 6.09
1573 4216 3.068691 CGGCGAGTCCCTTCTCCA 61.069 66.667 0.00 0.00 0.00 3.86
1575 4218 1.908483 GGCGAGTCCCTTCTCCATT 59.092 57.895 0.00 0.00 0.00 3.16
1590 4233 1.211212 TCCATTCCTCCACATGCTCTG 59.789 52.381 0.00 0.00 0.00 3.35
1591 4234 1.064906 CCATTCCTCCACATGCTCTGT 60.065 52.381 0.00 0.00 39.20 3.41
1592 4235 2.619849 CCATTCCTCCACATGCTCTGTT 60.620 50.000 0.00 0.00 35.29 3.16
1617 4260 4.843728 CTTTTCCCCAATGTAGTCTAGCA 58.156 43.478 0.00 0.00 0.00 3.49
1808 4457 1.380785 CGACTACCAGCCCCAGGTA 60.381 63.158 0.00 0.00 40.54 3.08
1811 4460 3.078836 TACCAGCCCCAGGTACGC 61.079 66.667 0.00 0.00 40.54 4.42
1813 4462 3.717294 CCAGCCCCAGGTACGCTT 61.717 66.667 0.00 0.00 0.00 4.68
1814 4463 2.436646 CAGCCCCAGGTACGCTTG 60.437 66.667 0.00 0.00 0.00 4.01
1827 4501 2.099431 CGCTTGCACTCTGCTCCTC 61.099 63.158 0.00 0.00 45.31 3.71
1828 4502 1.744741 GCTTGCACTCTGCTCCTCC 60.745 63.158 0.00 0.00 45.31 4.30
1829 4503 1.981636 CTTGCACTCTGCTCCTCCT 59.018 57.895 0.00 0.00 45.31 3.69
1832 4506 0.543883 TGCACTCTGCTCCTCCTCTT 60.544 55.000 0.00 0.00 45.31 2.85
1834 4508 0.823460 CACTCTGCTCCTCCTCTTCC 59.177 60.000 0.00 0.00 0.00 3.46
1835 4509 0.325203 ACTCTGCTCCTCCTCTTCCC 60.325 60.000 0.00 0.00 0.00 3.97
1836 4510 0.325110 CTCTGCTCCTCCTCTTCCCA 60.325 60.000 0.00 0.00 0.00 4.37
1837 4511 0.341258 TCTGCTCCTCCTCTTCCCAT 59.659 55.000 0.00 0.00 0.00 4.00
1839 4513 0.252881 TGCTCCTCCTCTTCCCATGT 60.253 55.000 0.00 0.00 0.00 3.21
1840 4514 1.008327 TGCTCCTCCTCTTCCCATGTA 59.992 52.381 0.00 0.00 0.00 2.29
1842 4516 2.752030 CTCCTCCTCTTCCCATGTACA 58.248 52.381 0.00 0.00 0.00 2.90
1860 4534 0.314302 CACTTCCTCTGTTCGACGGT 59.686 55.000 0.00 0.00 0.00 4.83
1868 4542 4.651008 GTTCGACGGTGGCGGTGA 62.651 66.667 0.00 0.00 0.00 4.02
2008 4693 2.404215 TCAAAAGCTTTCCTCTCGTCG 58.596 47.619 13.10 0.00 0.00 5.12
2019 4704 1.697772 CTCTCGTCGTCTCTGTCCGG 61.698 65.000 0.00 0.00 0.00 5.14
2023 4708 1.428620 GTCGTCTCTGTCCGGTAGC 59.571 63.158 0.00 0.00 0.00 3.58
2025 4710 2.799371 GTCTCTGTCCGGTAGCGG 59.201 66.667 27.16 27.16 0.00 5.52
2045 4730 3.244814 CGGAGCTGTACAGTACTACTACG 59.755 52.174 23.44 18.71 34.24 3.51
2072 4761 4.566488 GGCATTGAAGAAGAGGAGGAAGAA 60.566 45.833 0.00 0.00 0.00 2.52
2074 4763 5.474876 GCATTGAAGAAGAGGAGGAAGAAAA 59.525 40.000 0.00 0.00 0.00 2.29
2096 4785 0.457853 GCGACGTGGCATTGACTCTA 60.458 55.000 18.28 0.00 0.00 2.43
2255 4944 1.686325 GAGCCTCCTCGCATGGGTAA 61.686 60.000 9.86 0.00 0.00 2.85
2258 4947 0.541863 CCTCCTCGCATGGGTAAGTT 59.458 55.000 9.86 0.00 0.00 2.66
2259 4948 1.065418 CCTCCTCGCATGGGTAAGTTT 60.065 52.381 9.86 0.00 0.00 2.66
2260 4949 2.280628 CTCCTCGCATGGGTAAGTTTC 58.719 52.381 9.86 0.00 0.00 2.78
2261 4950 1.906574 TCCTCGCATGGGTAAGTTTCT 59.093 47.619 9.86 0.00 0.00 2.52
2262 4951 2.093658 TCCTCGCATGGGTAAGTTTCTC 60.094 50.000 9.86 0.00 0.00 2.87
2265 4954 1.379527 GCATGGGTAAGTTTCTCCCG 58.620 55.000 0.00 0.00 43.75 5.14
2299 4990 2.124983 CACATGCTCGTCCCCAGG 60.125 66.667 0.00 0.00 0.00 4.45
2328 5019 2.484889 GTGGCTGAGTTTTTCTCGTCT 58.515 47.619 0.00 0.00 45.46 4.18
2330 5021 2.158957 TGGCTGAGTTTTTCTCGTCTGT 60.159 45.455 0.00 0.00 45.46 3.41
2500 5191 1.203250 TCCCACCATGACAGAGGTACA 60.203 52.381 0.00 0.00 36.07 2.90
2507 5217 4.591498 ACCATGACAGAGGTACACAAACTA 59.409 41.667 0.00 0.00 36.07 2.24
2512 5222 5.538813 TGACAGAGGTACACAAACTACTGAT 59.461 40.000 0.00 0.00 0.00 2.90
2517 5227 7.441157 CAGAGGTACACAAACTACTGATGAAAA 59.559 37.037 0.00 0.00 0.00 2.29
2518 5228 8.157476 AGAGGTACACAAACTACTGATGAAAAT 58.843 33.333 0.00 0.00 0.00 1.82
2519 5229 8.691661 AGGTACACAAACTACTGATGAAAATT 57.308 30.769 0.00 0.00 0.00 1.82
2520 5230 9.787435 AGGTACACAAACTACTGATGAAAATTA 57.213 29.630 0.00 0.00 0.00 1.40
2546 5256 0.035881 TCTTCCTCTGCACTTGCTGG 59.964 55.000 8.09 5.45 42.66 4.85
2565 5275 4.536765 CTGGCCTACCTTGTCCAAATTAT 58.463 43.478 3.32 0.00 36.63 1.28
2590 5300 4.210331 ACAAAGTTCAGAATTCAGCCACT 58.790 39.130 8.44 2.76 0.00 4.00
2591 5301 4.037208 ACAAAGTTCAGAATTCAGCCACTG 59.963 41.667 8.44 0.00 0.00 3.66
2592 5302 2.787994 AGTTCAGAATTCAGCCACTGG 58.212 47.619 8.44 0.00 31.51 4.00
2593 5303 1.815003 GTTCAGAATTCAGCCACTGGG 59.185 52.381 8.44 0.00 31.51 4.45
2594 5304 1.361204 TCAGAATTCAGCCACTGGGA 58.639 50.000 8.44 0.00 35.59 4.37
2595 5305 1.280133 TCAGAATTCAGCCACTGGGAG 59.720 52.381 8.44 0.00 35.59 4.30
2596 5306 0.034670 AGAATTCAGCCACTGGGAGC 60.035 55.000 8.44 0.00 35.59 4.70
2597 5307 0.322816 GAATTCAGCCACTGGGAGCA 60.323 55.000 0.00 0.00 35.59 4.26
2598 5308 0.610232 AATTCAGCCACTGGGAGCAC 60.610 55.000 0.00 0.00 35.59 4.40
2599 5309 2.809861 ATTCAGCCACTGGGAGCACG 62.810 60.000 0.00 0.00 35.59 5.34
2600 5310 4.007644 CAGCCACTGGGAGCACGA 62.008 66.667 0.00 0.00 35.59 4.35
2601 5311 3.241530 AGCCACTGGGAGCACGAA 61.242 61.111 0.00 0.00 35.59 3.85
2602 5312 2.281484 GCCACTGGGAGCACGAAA 60.281 61.111 0.00 0.00 35.59 3.46
2603 5313 2.617274 GCCACTGGGAGCACGAAAC 61.617 63.158 0.00 0.00 35.59 2.78
2604 5314 1.071471 CCACTGGGAGCACGAAACT 59.929 57.895 0.00 0.00 35.59 2.66
2605 5315 0.535102 CCACTGGGAGCACGAAACTT 60.535 55.000 0.00 0.00 35.59 2.66
2606 5316 0.588252 CACTGGGAGCACGAAACTTG 59.412 55.000 0.00 0.00 0.00 3.16
2607 5317 1.166531 ACTGGGAGCACGAAACTTGC 61.167 55.000 0.00 0.00 40.52 4.01
2608 5318 1.153066 TGGGAGCACGAAACTTGCA 60.153 52.632 0.00 0.00 42.83 4.08
2636 5359 2.846193 TCTTGTAACGCTGAAGGCTTT 58.154 42.857 0.00 0.00 39.13 3.51
2666 5399 2.348104 ATGGCGTCGACCAGCACTA 61.348 57.895 15.80 3.92 44.71 2.74
2706 5439 2.290641 CGATAGTTGGTGCCCTAATTGC 59.709 50.000 0.00 0.00 0.00 3.56
2753 5486 3.670625 CCGTCTGGGTTTGAAGATGTTA 58.329 45.455 0.00 0.00 0.00 2.41
2809 5542 1.662446 GCGCCATAACCATGCATGC 60.662 57.895 21.69 11.82 0.00 4.06
2810 5543 1.734748 CGCCATAACCATGCATGCA 59.265 52.632 25.04 25.04 0.00 3.96
2811 5544 0.315886 CGCCATAACCATGCATGCAT 59.684 50.000 27.46 27.46 37.08 3.96
2819 5552 3.158648 ATGCATGCATGGGCCACC 61.159 61.111 31.74 10.52 40.13 4.61
2868 5601 0.379316 AAACGGACGACAAAAGGCAC 59.621 50.000 0.00 0.00 0.00 5.01
2871 5604 0.041312 CGGACGACAAAAGGCACAAG 60.041 55.000 0.00 0.00 0.00 3.16
2872 5605 0.310854 GGACGACAAAAGGCACAAGG 59.689 55.000 0.00 0.00 0.00 3.61
2874 5607 1.002792 GACGACAAAAGGCACAAGGAC 60.003 52.381 0.00 0.00 0.00 3.85
2875 5608 1.021202 CGACAAAAGGCACAAGGACA 58.979 50.000 0.00 0.00 0.00 4.02
2878 5611 2.427095 GACAAAAGGCACAAGGACAACT 59.573 45.455 0.00 0.00 0.00 3.16
2881 5614 3.577805 AAAGGCACAAGGACAACTACT 57.422 42.857 0.00 0.00 0.00 2.57
2940 5686 0.389426 CTCTTGCCCTGCATTGCAAC 60.389 55.000 16.45 5.96 42.19 4.17
2991 5739 1.952990 TGCCAATCAAGCAGACGAAAA 59.047 42.857 0.00 0.00 34.69 2.29
3004 5752 4.578601 CAGACGAAAACATTATCCGAAGC 58.421 43.478 0.00 0.00 0.00 3.86
3021 5769 1.992170 AGCGCTTCTTACAAGGTACG 58.008 50.000 2.64 0.00 0.00 3.67
3049 5805 3.866356 GAACGGTAGGTTCGCCAC 58.134 61.111 0.00 0.00 45.05 5.01
3067 5827 3.702045 GCCACCTCTGTCATTCTAGTAGT 59.298 47.826 0.00 0.00 0.00 2.73
3068 5828 4.888239 GCCACCTCTGTCATTCTAGTAGTA 59.112 45.833 0.00 0.00 0.00 1.82
3069 5829 5.221087 GCCACCTCTGTCATTCTAGTAGTAC 60.221 48.000 0.00 0.00 0.00 2.73
3104 5864 4.037923 GTGGACAAATCACAACTGGAATGT 59.962 41.667 0.00 0.00 35.39 2.71
3151 5911 6.698766 GCTTGGATGGATGAATAATTGTCAAC 59.301 38.462 0.00 0.00 0.00 3.18
3158 5930 5.163581 GGATGAATAATTGTCAACAGCTGCT 60.164 40.000 15.27 0.00 0.00 4.24
3159 5931 5.050644 TGAATAATTGTCAACAGCTGCTG 57.949 39.130 27.02 27.02 37.52 4.41
3228 6001 0.677731 GCACTGCAGGTCAAGCCATA 60.678 55.000 19.93 0.00 40.61 2.74
3229 6002 1.089920 CACTGCAGGTCAAGCCATAC 58.910 55.000 19.93 0.00 40.61 2.39
3230 6003 0.035056 ACTGCAGGTCAAGCCATACC 60.035 55.000 19.93 0.00 40.61 2.73
3231 6004 0.749454 CTGCAGGTCAAGCCATACCC 60.749 60.000 5.57 0.00 40.61 3.69
3232 6005 1.453928 GCAGGTCAAGCCATACCCC 60.454 63.158 0.00 0.00 40.61 4.95
3233 6006 1.998530 CAGGTCAAGCCATACCCCA 59.001 57.895 0.00 0.00 40.61 4.96
3234 6007 0.552848 CAGGTCAAGCCATACCCCAT 59.447 55.000 0.00 0.00 40.61 4.00
3235 6008 1.774254 CAGGTCAAGCCATACCCCATA 59.226 52.381 0.00 0.00 40.61 2.74
3248 6021 6.896307 GCCATACCCCATACTAGTAGTAATCT 59.104 42.308 13.92 0.00 33.89 2.40
3292 6065 0.621082 TTATGGATGTCCGGTGCCAA 59.379 50.000 0.00 0.00 39.43 4.52
3309 6082 0.810031 CAAGTAACCATCTCGCCCGG 60.810 60.000 0.00 0.00 0.00 5.73
3334 6107 8.140112 GGAATAATCTCCCTAGCTATCTGAAA 57.860 38.462 0.00 0.00 0.00 2.69
3335 6108 8.598041 GGAATAATCTCCCTAGCTATCTGAAAA 58.402 37.037 0.00 0.00 0.00 2.29
3336 6109 9.430623 GAATAATCTCCCTAGCTATCTGAAAAC 57.569 37.037 0.00 0.00 0.00 2.43
3338 6111 7.385894 AATCTCCCTAGCTATCTGAAAACAT 57.614 36.000 0.00 0.00 0.00 2.71
3340 6113 7.914427 TCTCCCTAGCTATCTGAAAACATAA 57.086 36.000 0.00 0.00 0.00 1.90
3341 6114 8.497910 TCTCCCTAGCTATCTGAAAACATAAT 57.502 34.615 0.00 0.00 0.00 1.28
3355 6128 8.981370 TGAAAACATAATATTAACATCGACGC 57.019 30.769 0.00 0.00 0.00 5.19
3404 6178 4.706962 GTCCAATCAAATAGAGCCCAAACT 59.293 41.667 0.00 0.00 0.00 2.66
3449 6223 1.865865 CTTGCACCTGTCGTAGTTGT 58.134 50.000 0.00 0.00 0.00 3.32
3472 6246 1.188219 AGCATGTCTGTCAGGGTCGT 61.188 55.000 0.00 0.00 33.18 4.34
3473 6247 1.016130 GCATGTCTGTCAGGGTCGTG 61.016 60.000 0.00 4.61 0.00 4.35
3492 6289 4.580528 CGTGCATACGGTTGTTAAATACC 58.419 43.478 0.00 0.00 46.23 2.73
3501 6298 3.481839 GTTGTTAAATACCGCCACGTTC 58.518 45.455 0.00 0.00 0.00 3.95
3533 6349 3.319122 CAGTTGCTTGGGTTCTAGCTTTT 59.681 43.478 0.00 0.00 41.25 2.27
3591 6408 0.169672 ACGTAGTGCGCGAGTAACAT 59.830 50.000 12.10 0.00 46.11 2.71
3614 6431 1.324005 ACCAAACCAAACCCGTGTGG 61.324 55.000 2.28 2.28 43.33 4.17
3635 6452 3.120060 GGTTTCGTCGACTAGCTTGTCTA 60.120 47.826 22.89 11.95 35.00 2.59
3643 6460 5.513495 GTCGACTAGCTTGTCTATTGTCTTG 59.487 44.000 22.89 7.11 35.00 3.02
3666 6483 1.523258 GCTCTGCTGGACATCGCAT 60.523 57.895 0.00 0.00 35.32 4.73
3669 6486 0.460811 TCTGCTGGACATCGCATCAC 60.461 55.000 0.00 0.00 35.32 3.06
3670 6487 0.741927 CTGCTGGACATCGCATCACA 60.742 55.000 0.00 0.00 35.32 3.58
3671 6488 1.020861 TGCTGGACATCGCATCACAC 61.021 55.000 0.00 0.00 0.00 3.82
3672 6489 1.709147 GCTGGACATCGCATCACACC 61.709 60.000 0.00 0.00 0.00 4.16
3673 6490 0.391528 CTGGACATCGCATCACACCA 60.392 55.000 0.00 0.00 0.00 4.17
3745 6563 4.343581 ACTGTGTGTAGCAGTGCG 57.656 55.556 10.00 0.00 44.52 5.34
3811 6632 7.108194 TGCATAATGGAGGATCAATCAGTATC 58.892 38.462 0.00 0.00 36.25 2.24
3812 6633 7.108194 GCATAATGGAGGATCAATCAGTATCA 58.892 38.462 0.00 0.00 36.25 2.15
3813 6634 7.280428 GCATAATGGAGGATCAATCAGTATCAG 59.720 40.741 0.00 0.00 36.25 2.90
3814 6635 4.613925 TGGAGGATCAATCAGTATCAGC 57.386 45.455 0.00 0.00 36.25 4.26
3815 6636 3.969312 TGGAGGATCAATCAGTATCAGCA 59.031 43.478 0.00 0.00 36.25 4.41
3816 6637 4.409901 TGGAGGATCAATCAGTATCAGCAA 59.590 41.667 0.00 0.00 36.25 3.91
3817 6638 5.072736 TGGAGGATCAATCAGTATCAGCAAT 59.927 40.000 0.00 0.00 36.25 3.56
3852 6679 3.909086 AAGGCCTGTCTCCAAGCGC 62.909 63.158 5.69 0.00 0.00 5.92
3894 6743 2.230750 ACGGTTAGAGGTTGAGCAGTAC 59.769 50.000 0.00 0.00 0.00 2.73
3934 6783 3.601435 GGAAGCTACAAGGAGAACTTCC 58.399 50.000 4.02 4.02 44.45 3.46
3951 6800 4.670765 ACTTCCTTGGCATTGAATCTTCT 58.329 39.130 0.00 0.00 0.00 2.85
3955 6804 5.569355 TCCTTGGCATTGAATCTTCTGTTA 58.431 37.500 0.00 0.00 0.00 2.41
3961 6810 5.645497 GGCATTGAATCTTCTGTTAGTGAGT 59.355 40.000 0.00 0.00 0.00 3.41
3963 6812 6.402983 GCATTGAATCTTCTGTTAGTGAGTGG 60.403 42.308 0.00 0.00 0.00 4.00
3969 6818 0.324943 CTGTTAGTGAGTGGGTGGGG 59.675 60.000 0.00 0.00 0.00 4.96
3970 6819 0.104882 TGTTAGTGAGTGGGTGGGGA 60.105 55.000 0.00 0.00 0.00 4.81
3971 6820 1.061546 GTTAGTGAGTGGGTGGGGAA 58.938 55.000 0.00 0.00 0.00 3.97
3972 6821 1.633945 GTTAGTGAGTGGGTGGGGAAT 59.366 52.381 0.00 0.00 0.00 3.01
3976 6825 0.698238 TGAGTGGGTGGGGAATGAAG 59.302 55.000 0.00 0.00 0.00 3.02
3988 6840 3.353557 GGGAATGAAGGGTTAGGACAAC 58.646 50.000 0.00 0.00 0.00 3.32
3993 6845 2.224354 TGAAGGGTTAGGACAACGAACC 60.224 50.000 0.00 1.40 41.66 3.62
3997 6849 0.033920 GTTAGGACAACGAACCGGGT 59.966 55.000 6.32 0.00 0.00 5.28
4000 6852 1.957695 GGACAACGAACCGGGTGAC 60.958 63.158 6.32 0.00 0.00 3.67
4036 6888 3.569701 TCTGGCTTTGGAAGATGACAAAC 59.430 43.478 0.00 0.00 33.45 2.93
4046 6898 3.771577 AGATGACAAACGGGTCTTCTT 57.228 42.857 13.21 3.36 44.95 2.52
4064 6916 1.531739 TTGTCCTTTTGGCCGCATCC 61.532 55.000 0.00 0.00 40.12 3.51
4098 6950 1.748493 TGGCCGGTTTCTTGATAATGC 59.252 47.619 1.90 0.00 0.00 3.56
4138 7012 6.591750 TCTGTTGCTTCTAGCTTAGTACTT 57.408 37.500 0.00 0.00 42.97 2.24
4139 7013 7.628794 GCTCTGTTGCTTCTAGCTTAGTACTTA 60.629 40.741 0.00 0.00 42.97 2.24
4140 7014 7.536855 TCTGTTGCTTCTAGCTTAGTACTTAC 58.463 38.462 0.00 0.00 42.97 2.34
4141 7015 7.393796 TCTGTTGCTTCTAGCTTAGTACTTACT 59.606 37.037 0.00 0.00 42.97 2.24
4142 7016 8.571461 TGTTGCTTCTAGCTTAGTACTTACTA 57.429 34.615 0.00 0.00 42.97 1.82
4143 7017 8.457261 TGTTGCTTCTAGCTTAGTACTTACTAC 58.543 37.037 0.00 0.00 42.97 2.73
4144 7018 8.676401 GTTGCTTCTAGCTTAGTACTTACTACT 58.324 37.037 0.00 0.00 42.97 2.57
4145 7019 9.896645 TTGCTTCTAGCTTAGTACTTACTACTA 57.103 33.333 0.00 0.00 42.97 1.82
4146 7020 9.323985 TGCTTCTAGCTTAGTACTTACTACTAC 57.676 37.037 0.00 0.00 42.97 2.73
4213 7094 4.038642 AGGACAGCTCGAGAAGATAAATCC 59.961 45.833 18.75 10.23 0.00 3.01
4269 7161 2.328099 GCTTGGTCTGCTCCAACCG 61.328 63.158 4.89 0.00 41.79 4.44
4290 7182 3.797256 CGAAGTCCAATCACGGATTAGTC 59.203 47.826 0.00 0.00 37.41 2.59
4298 7190 5.802451 CCAATCACGGATTAGTCTATCATCG 59.198 44.000 0.00 0.00 30.44 3.84
4300 7192 3.190744 TCACGGATTAGTCTATCATCGCC 59.809 47.826 0.00 0.00 0.00 5.54
4301 7193 2.161808 ACGGATTAGTCTATCATCGCCG 59.838 50.000 0.00 0.00 41.72 6.46
4304 7196 4.272748 CGGATTAGTCTATCATCGCCGATA 59.727 45.833 0.00 0.00 38.57 2.92
4311 7203 4.153655 GTCTATCATCGCCGATACACTGTA 59.846 45.833 0.00 0.00 0.00 2.74
4321 7213 3.488721 CCGATACACTGTACCACTAGCAC 60.489 52.174 0.00 0.00 0.00 4.40
4325 7217 6.294010 CGATACACTGTACCACTAGCACATAT 60.294 42.308 0.00 0.00 0.00 1.78
4327 7223 6.145338 ACACTGTACCACTAGCACATATAC 57.855 41.667 0.00 0.00 0.00 1.47
4330 7226 7.558807 ACACTGTACCACTAGCACATATACTTA 59.441 37.037 0.00 0.00 0.00 2.24
4332 7228 7.014038 ACTGTACCACTAGCACATATACTTACC 59.986 40.741 0.00 0.00 0.00 2.85
4333 7229 6.834969 TGTACCACTAGCACATATACTTACCA 59.165 38.462 0.00 0.00 0.00 3.25
4336 7232 6.553476 ACCACTAGCACATATACTTACCATCA 59.447 38.462 0.00 0.00 0.00 3.07
4338 7234 7.255977 CCACTAGCACATATACTTACCATCAGT 60.256 40.741 0.00 0.00 0.00 3.41
4339 7235 8.144478 CACTAGCACATATACTTACCATCAGTT 58.856 37.037 0.00 0.00 0.00 3.16
4340 7236 8.144478 ACTAGCACATATACTTACCATCAGTTG 58.856 37.037 0.00 0.00 0.00 3.16
4341 7237 6.889198 AGCACATATACTTACCATCAGTTGT 58.111 36.000 0.00 0.00 0.00 3.32
4342 7238 6.986817 AGCACATATACTTACCATCAGTTGTC 59.013 38.462 0.00 0.00 0.00 3.18
4343 7239 6.986817 GCACATATACTTACCATCAGTTGTCT 59.013 38.462 0.00 0.00 0.00 3.41
4358 7254 5.354513 TCAGTTGTCTGATACTCTCGTTAGG 59.645 44.000 0.00 0.00 44.58 2.69
4368 7264 1.445582 CTCGTTAGGCCACACGACC 60.446 63.158 21.83 0.00 40.43 4.79
4369 7265 2.807895 CGTTAGGCCACACGACCG 60.808 66.667 19.27 1.14 38.76 4.79
4370 7266 2.652530 GTTAGGCCACACGACCGA 59.347 61.111 5.01 0.00 0.00 4.69
4371 7267 1.735559 GTTAGGCCACACGACCGAC 60.736 63.158 5.01 0.00 0.00 4.79
4398 7294 5.006358 GCAGAGACTCGACTGTTTTGTTTTA 59.994 40.000 0.00 0.00 36.62 1.52
4408 7304 9.798885 TCGACTGTTTTGTTTTATTTTGTTTTG 57.201 25.926 0.00 0.00 0.00 2.44
4422 7318 7.844070 ATTTTGTTTTGTTTGTTGGAAAACG 57.156 28.000 0.00 0.00 41.92 3.60
4423 7319 6.598753 TTTGTTTTGTTTGTTGGAAAACGA 57.401 29.167 0.00 0.00 41.92 3.85
4424 7320 6.598753 TTGTTTTGTTTGTTGGAAAACGAA 57.401 29.167 0.00 0.00 41.92 3.85
4425 7321 6.216750 TGTTTTGTTTGTTGGAAAACGAAG 57.783 33.333 0.00 0.00 41.91 3.79
4439 7335 1.687563 ACGAAGTTTTGGGGGTGAAG 58.312 50.000 0.00 0.00 37.78 3.02
4452 7348 2.100749 GGGGTGAAGTGTTTCAGTTTGG 59.899 50.000 0.00 0.00 43.66 3.28
4458 7354 3.782889 AGTGTTTCAGTTTGGAGCAAC 57.217 42.857 0.00 0.00 0.00 4.17
4463 7359 0.662619 TCAGTTTGGAGCAACGCTTG 59.337 50.000 0.00 0.00 39.88 4.01
4465 7361 0.751643 AGTTTGGAGCAACGCTTGGT 60.752 50.000 2.78 2.78 45.34 3.67
4476 7372 1.100463 ACGCTTGGTGTGCACATTCA 61.100 50.000 24.69 20.69 0.00 2.57
4480 7376 2.489329 GCTTGGTGTGCACATTCAGTAT 59.511 45.455 24.69 0.00 0.00 2.12
4481 7377 3.671433 GCTTGGTGTGCACATTCAGTATG 60.671 47.826 24.69 14.86 40.26 2.39
4518 7416 3.015327 GCTGCCATTCTGAATCTTGAGT 58.985 45.455 0.00 0.00 0.00 3.41
4520 7418 4.272991 GCTGCCATTCTGAATCTTGAGTAG 59.727 45.833 0.00 0.00 0.00 2.57
4521 7419 5.426504 CTGCCATTCTGAATCTTGAGTAGT 58.573 41.667 0.00 0.00 0.00 2.73
4522 7420 5.181009 TGCCATTCTGAATCTTGAGTAGTG 58.819 41.667 0.00 0.00 0.00 2.74
4523 7421 4.574013 GCCATTCTGAATCTTGAGTAGTGG 59.426 45.833 0.00 0.00 0.00 4.00
4524 7422 4.574013 CCATTCTGAATCTTGAGTAGTGGC 59.426 45.833 0.00 0.00 0.00 5.01
4525 7423 5.426504 CATTCTGAATCTTGAGTAGTGGCT 58.573 41.667 0.00 0.00 0.00 4.75
4526 7424 4.462508 TCTGAATCTTGAGTAGTGGCTG 57.537 45.455 0.00 0.00 0.00 4.85
4527 7425 3.834813 TCTGAATCTTGAGTAGTGGCTGT 59.165 43.478 0.00 0.00 0.00 4.40
4528 7426 5.016831 TCTGAATCTTGAGTAGTGGCTGTA 58.983 41.667 0.00 0.00 0.00 2.74
4531 7429 5.187772 TGAATCTTGAGTAGTGGCTGTATGT 59.812 40.000 0.00 0.00 0.00 2.29
4543 7441 7.325660 AGTGGCTGTATGTATCTGAATTTTG 57.674 36.000 0.00 0.00 0.00 2.44
4546 7444 5.973565 GGCTGTATGTATCTGAATTTTGTGC 59.026 40.000 0.00 0.00 0.00 4.57
4547 7445 6.183360 GGCTGTATGTATCTGAATTTTGTGCT 60.183 38.462 0.00 0.00 0.00 4.40
4550 7448 8.334263 TGTATGTATCTGAATTTTGTGCTTCA 57.666 30.769 0.00 0.00 0.00 3.02
4551 7449 8.236586 TGTATGTATCTGAATTTTGTGCTTCAC 58.763 33.333 0.00 0.00 34.56 3.18
4552 7450 6.882610 TGTATCTGAATTTTGTGCTTCACT 57.117 33.333 0.00 0.00 35.11 3.41
4553 7451 6.671190 TGTATCTGAATTTTGTGCTTCACTG 58.329 36.000 0.00 0.00 35.11 3.66
4555 7453 5.173774 TCTGAATTTTGTGCTTCACTGAC 57.826 39.130 0.00 0.00 35.11 3.51
4556 7454 4.883585 TCTGAATTTTGTGCTTCACTGACT 59.116 37.500 0.00 0.00 35.11 3.41
4557 7455 5.357878 TCTGAATTTTGTGCTTCACTGACTT 59.642 36.000 0.00 0.00 35.11 3.01
4558 7456 5.342433 TGAATTTTGTGCTTCACTGACTTG 58.658 37.500 0.00 0.00 35.11 3.16
4559 7457 3.781079 TTTTGTGCTTCACTGACTTGG 57.219 42.857 0.00 0.00 35.11 3.61
4560 7458 2.418368 TTGTGCTTCACTGACTTGGT 57.582 45.000 0.00 0.00 35.11 3.67
4561 7459 2.418368 TGTGCTTCACTGACTTGGTT 57.582 45.000 0.00 0.00 35.11 3.67
4562 7460 2.016318 TGTGCTTCACTGACTTGGTTG 58.984 47.619 0.00 0.00 35.11 3.77
4563 7461 1.024271 TGCTTCACTGACTTGGTTGC 58.976 50.000 0.00 0.00 0.00 4.17
4564 7462 0.312102 GCTTCACTGACTTGGTTGCC 59.688 55.000 0.00 0.00 0.00 4.52
4566 7464 2.233271 CTTCACTGACTTGGTTGCCAT 58.767 47.619 0.00 0.00 31.53 4.40
4567 7465 1.608055 TCACTGACTTGGTTGCCATG 58.392 50.000 0.29 0.29 35.21 3.66
4568 7466 0.599558 CACTGACTTGGTTGCCATGG 59.400 55.000 7.63 7.63 33.63 3.66
4569 7467 0.540365 ACTGACTTGGTTGCCATGGG 60.540 55.000 15.13 0.00 33.63 4.00
4570 7468 0.540365 CTGACTTGGTTGCCATGGGT 60.540 55.000 15.13 0.00 33.63 4.51
4571 7469 0.827089 TGACTTGGTTGCCATGGGTG 60.827 55.000 15.13 0.00 33.63 4.61
4572 7470 0.539438 GACTTGGTTGCCATGGGTGA 60.539 55.000 15.13 0.00 33.63 4.02
4573 7471 0.114954 ACTTGGTTGCCATGGGTGAT 59.885 50.000 15.13 0.00 33.63 3.06
4574 7472 1.269012 CTTGGTTGCCATGGGTGATT 58.731 50.000 15.13 0.00 31.53 2.57
4575 7473 0.975135 TTGGTTGCCATGGGTGATTG 59.025 50.000 15.13 0.00 31.53 2.67
4576 7474 0.113972 TGGTTGCCATGGGTGATTGA 59.886 50.000 15.13 0.00 0.00 2.57
4577 7475 0.532115 GGTTGCCATGGGTGATTGAC 59.468 55.000 15.13 0.00 0.00 3.18
4578 7476 0.171007 GTTGCCATGGGTGATTGACG 59.829 55.000 15.13 0.00 0.00 4.35
4624 7522 1.666011 GGCCGAGATATCGCAGGAA 59.334 57.895 16.97 0.00 0.00 3.36
4732 7636 0.030369 ATGACTACGACGGCGAATCC 59.970 55.000 22.49 4.01 41.64 3.01
4793 7697 6.238731 CCACGCCAATGATTGATTACATTAGT 60.239 38.462 6.76 0.00 35.39 2.24
4799 7703 7.452501 CCAATGATTGATTACATTAGTCCCCAT 59.547 37.037 6.76 0.00 35.39 4.00
4803 7707 5.985175 TGATTACATTAGTCCCCATCCAA 57.015 39.130 0.00 0.00 0.00 3.53
4838 7742 3.056536 GCTGTCAGTAGATCAAGTGTCCA 60.057 47.826 0.93 0.00 0.00 4.02
4869 7775 3.157881 TGGCTTAGGAGATCGGTATGAG 58.842 50.000 0.00 0.00 0.00 2.90
4880 7788 7.286546 AGGAGATCGGTATGAGTATGAATATGG 59.713 40.741 0.00 0.00 0.00 2.74
4982 8215 3.096092 TCAAGCCCATGGTTTCCATTAC 58.904 45.455 11.73 0.00 42.23 1.89
5021 8261 0.250513 ACGCAAGAATCTCCCTCCAC 59.749 55.000 0.00 0.00 43.62 4.02
5185 8428 0.961753 CTGTTGGTTCAGGGCTTTCC 59.038 55.000 0.00 0.00 0.00 3.13
5189 8432 0.251742 TGGTTCAGGGCTTTCCATGG 60.252 55.000 4.97 4.97 43.95 3.66
5190 8433 0.039618 GGTTCAGGGCTTTCCATGGA 59.960 55.000 11.44 11.44 43.95 3.41
5191 8434 1.342374 GGTTCAGGGCTTTCCATGGAT 60.342 52.381 17.06 0.00 43.95 3.41
5192 8435 1.753073 GTTCAGGGCTTTCCATGGATG 59.247 52.381 17.06 12.84 43.95 3.51
5212 8455 2.014064 GATCTGAGCTGAGGCGAGCA 62.014 60.000 13.10 0.00 41.83 4.26
5262 8505 1.904287 TTGGTCGTTAGCCAGCAAAT 58.096 45.000 0.00 0.00 37.31 2.32
5268 8511 2.881513 TCGTTAGCCAGCAAATTGAACA 59.118 40.909 0.00 0.00 0.00 3.18
5415 8680 0.929615 GAAACCCGTTCGTTCGTTCA 59.070 50.000 0.00 0.00 0.00 3.18
5418 8683 0.872881 ACCCGTTCGTTCGTTCAGTG 60.873 55.000 0.00 0.00 0.00 3.66
5423 8688 3.457596 CGTTCGTTCGTTCAGTGAAATC 58.542 45.455 7.25 0.00 0.00 2.17
5424 8689 3.181774 CGTTCGTTCGTTCAGTGAAATCT 59.818 43.478 7.25 0.00 0.00 2.40
5428 8693 5.152097 TCGTTCGTTCAGTGAAATCTCTAC 58.848 41.667 7.25 0.22 0.00 2.59
5429 8694 4.915667 CGTTCGTTCAGTGAAATCTCTACA 59.084 41.667 7.25 0.00 0.00 2.74
5430 8695 5.401376 CGTTCGTTCAGTGAAATCTCTACAA 59.599 40.000 7.25 0.00 0.00 2.41
5434 8699 6.641314 TCGTTCAGTGAAATCTCTACAAAGAC 59.359 38.462 7.25 0.00 0.00 3.01
5435 8700 6.642950 CGTTCAGTGAAATCTCTACAAAGACT 59.357 38.462 7.25 0.00 0.00 3.24
5436 8701 7.169982 CGTTCAGTGAAATCTCTACAAAGACTT 59.830 37.037 7.25 0.00 0.00 3.01
5437 8702 9.477484 GTTCAGTGAAATCTCTACAAAGACTTA 57.523 33.333 7.25 0.00 0.00 2.24
5475 8746 1.376683 TAGCTGCGAAAATGGCCGT 60.377 52.632 0.00 0.00 0.00 5.68
5499 8770 0.462759 GCAGCGTAAATGCTCCCTCT 60.463 55.000 0.00 0.00 45.23 3.69
5508 8779 3.775654 GCTCCCTCTGTCCCACGG 61.776 72.222 0.00 0.00 0.00 4.94
5545 9693 3.847042 ATATTATGAGACGGAGGGGGA 57.153 47.619 0.00 0.00 0.00 4.81
5546 9694 2.489528 ATTATGAGACGGAGGGGGAA 57.510 50.000 0.00 0.00 0.00 3.97
5574 9722 3.319972 TCAAACGTAGTGCTACCTTGAGT 59.680 43.478 13.23 1.34 45.00 3.41
5576 9724 4.431661 AACGTAGTGCTACCTTGAGTAC 57.568 45.455 4.02 0.00 45.00 2.73
5640 10412 2.613506 GGCCGTGTACTGCACCAAC 61.614 63.158 0.00 0.00 44.97 3.77
5712 10484 1.294780 CCTGCACTCCACTCCACTC 59.705 63.158 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 5.348997 ACAGACGTAAGATGAAGCTTTTAGC 59.651 40.000 0.00 0.00 41.16 3.09
8 9 6.952935 ACAGACGTAAGATGAAGCTTTTAG 57.047 37.500 0.00 0.00 43.62 1.85
9 10 7.063074 GCTAACAGACGTAAGATGAAGCTTTTA 59.937 37.037 0.00 0.00 43.62 1.52
10 11 6.128526 GCTAACAGACGTAAGATGAAGCTTTT 60.129 38.462 0.00 0.00 43.62 2.27
11 12 5.348997 GCTAACAGACGTAAGATGAAGCTTT 59.651 40.000 0.00 0.00 43.62 3.51
12 13 4.865365 GCTAACAGACGTAAGATGAAGCTT 59.135 41.667 0.00 0.00 43.62 3.74
13 14 4.158764 AGCTAACAGACGTAAGATGAAGCT 59.841 41.667 13.18 13.18 40.81 3.74
14 15 4.425520 AGCTAACAGACGTAAGATGAAGC 58.574 43.478 0.00 1.36 43.62 3.86
15 16 5.885881 AGAGCTAACAGACGTAAGATGAAG 58.114 41.667 0.00 0.00 43.62 3.02
16 17 5.899120 AGAGCTAACAGACGTAAGATGAA 57.101 39.130 0.00 0.00 43.62 2.57
17 18 5.296283 GGTAGAGCTAACAGACGTAAGATGA 59.704 44.000 0.00 0.00 43.62 2.92
18 19 5.066117 TGGTAGAGCTAACAGACGTAAGATG 59.934 44.000 0.00 0.00 43.62 2.90
19 20 5.191426 TGGTAGAGCTAACAGACGTAAGAT 58.809 41.667 0.00 0.00 43.62 2.40
20 21 4.582869 TGGTAGAGCTAACAGACGTAAGA 58.417 43.478 0.00 0.00 43.62 2.10
29 30 0.450583 CGTCGCTGGTAGAGCTAACA 59.549 55.000 0.00 0.00 46.64 2.41
30 31 0.248539 CCGTCGCTGGTAGAGCTAAC 60.249 60.000 0.00 0.00 46.64 2.34
31 32 0.393402 TCCGTCGCTGGTAGAGCTAA 60.393 55.000 0.00 0.00 46.64 3.09
32 33 0.814410 CTCCGTCGCTGGTAGAGCTA 60.814 60.000 0.00 0.00 46.64 3.32
33 34 2.045242 TCCGTCGCTGGTAGAGCT 60.045 61.111 0.00 0.00 46.64 4.09
34 35 2.409651 CTCCGTCGCTGGTAGAGC 59.590 66.667 0.00 0.00 45.20 4.09
35 36 2.409651 GCTCCGTCGCTGGTAGAG 59.590 66.667 0.00 0.00 0.00 2.43
36 37 3.138798 GGCTCCGTCGCTGGTAGA 61.139 66.667 0.00 0.00 0.00 2.59
37 38 2.501223 TTTGGCTCCGTCGCTGGTAG 62.501 60.000 0.00 0.00 0.00 3.18
38 39 2.575893 TTTGGCTCCGTCGCTGGTA 61.576 57.895 0.00 0.00 0.00 3.25
39 40 3.936203 TTTGGCTCCGTCGCTGGT 61.936 61.111 0.00 0.00 0.00 4.00
40 41 3.423154 GTTTGGCTCCGTCGCTGG 61.423 66.667 0.00 0.00 0.00 4.85
41 42 3.777925 CGTTTGGCTCCGTCGCTG 61.778 66.667 0.00 0.00 0.00 5.18
44 45 1.296056 AATTCCGTTTGGCTCCGTCG 61.296 55.000 0.00 0.00 34.14 5.12
45 46 0.879090 AAATTCCGTTTGGCTCCGTC 59.121 50.000 0.00 0.00 34.14 4.79
46 47 0.596082 CAAATTCCGTTTGGCTCCGT 59.404 50.000 0.00 0.00 42.79 4.69
47 48 3.399879 CAAATTCCGTTTGGCTCCG 57.600 52.632 0.00 0.00 42.79 4.63
85 86 1.327764 GCGGGTTTCGAGACATGATTC 59.672 52.381 8.50 0.00 42.43 2.52
89 90 2.452813 CGGCGGGTTTCGAGACATG 61.453 63.158 8.50 0.63 42.43 3.21
160 161 1.152139 GGAGGGGATAGAGCTGGCT 60.152 63.158 0.00 0.00 0.00 4.75
168 169 0.322975 CTTCATGGCGGAGGGGATAG 59.677 60.000 0.00 0.00 0.00 2.08
176 177 2.236146 ACAGTTATGACTTCATGGCGGA 59.764 45.455 1.77 0.00 37.15 5.54
178 179 2.282555 CGACAGTTATGACTTCATGGCG 59.717 50.000 1.77 0.00 37.15 5.69
179 180 3.521560 TCGACAGTTATGACTTCATGGC 58.478 45.455 1.77 0.00 37.15 4.40
181 182 5.812127 TGGATTCGACAGTTATGACTTCATG 59.188 40.000 1.77 0.00 37.15 3.07
182 183 5.977635 TGGATTCGACAGTTATGACTTCAT 58.022 37.500 0.00 0.00 40.22 2.57
183 184 5.400066 TGGATTCGACAGTTATGACTTCA 57.600 39.130 0.00 0.00 32.54 3.02
184 185 6.709643 CAATGGATTCGACAGTTATGACTTC 58.290 40.000 0.00 0.00 32.54 3.01
186 187 4.572389 GCAATGGATTCGACAGTTATGACT 59.428 41.667 0.00 0.00 36.25 3.41
187 188 4.260784 GGCAATGGATTCGACAGTTATGAC 60.261 45.833 0.00 0.00 0.00 3.06
188 189 3.876914 GGCAATGGATTCGACAGTTATGA 59.123 43.478 0.00 0.00 0.00 2.15
189 190 3.627123 TGGCAATGGATTCGACAGTTATG 59.373 43.478 0.00 0.00 0.00 1.90
251 2829 4.776322 TGGTCTGATTGCCGGGCG 62.776 66.667 15.40 0.00 0.00 6.13
252 2830 2.825836 CTGGTCTGATTGCCGGGC 60.826 66.667 13.32 13.32 0.00 6.13
253 2831 2.825836 GCTGGTCTGATTGCCGGG 60.826 66.667 2.18 0.00 0.00 5.73
254 2832 2.046023 TGCTGGTCTGATTGCCGG 60.046 61.111 0.00 0.00 0.00 6.13
255 2833 2.401766 GGTGCTGGTCTGATTGCCG 61.402 63.158 0.00 0.00 0.00 5.69
256 2834 1.303561 TGGTGCTGGTCTGATTGCC 60.304 57.895 0.00 0.00 0.00 4.52
257 2835 1.930908 GCTGGTGCTGGTCTGATTGC 61.931 60.000 0.00 0.00 36.03 3.56
325 2909 2.237751 ACGCAACGCTGAGTGACAC 61.238 57.895 0.00 0.00 33.90 3.67
332 2916 0.882484 TTTCATCCACGCAACGCTGA 60.882 50.000 0.00 0.00 0.00 4.26
334 2918 0.168788 CATTTCATCCACGCAACGCT 59.831 50.000 0.00 0.00 0.00 5.07
339 2923 2.147150 TCGTTTCATTTCATCCACGCA 58.853 42.857 0.00 0.00 0.00 5.24
340 2924 2.476185 CCTCGTTTCATTTCATCCACGC 60.476 50.000 0.00 0.00 0.00 5.34
341 2925 2.095853 CCCTCGTTTCATTTCATCCACG 59.904 50.000 0.00 0.00 0.00 4.94
342 2926 2.159379 GCCCTCGTTTCATTTCATCCAC 60.159 50.000 0.00 0.00 0.00 4.02
343 2927 2.091541 GCCCTCGTTTCATTTCATCCA 58.908 47.619 0.00 0.00 0.00 3.41
344 2928 1.064060 CGCCCTCGTTTCATTTCATCC 59.936 52.381 0.00 0.00 0.00 3.51
346 2930 2.107950 TCGCCCTCGTTTCATTTCAT 57.892 45.000 0.00 0.00 36.96 2.57
347 2931 2.006888 GATCGCCCTCGTTTCATTTCA 58.993 47.619 0.00 0.00 36.96 2.69
349 2933 1.006832 CGATCGCCCTCGTTTCATTT 58.993 50.000 0.26 0.00 36.96 2.32
350 2934 0.174845 TCGATCGCCCTCGTTTCATT 59.825 50.000 11.09 0.00 39.62 2.57
378 2962 9.541884 TTAGCCTCTTTTTAATCCAAAAGGTAT 57.458 29.630 6.17 0.00 42.02 2.73
382 2966 7.278646 GCCATTAGCCTCTTTTTAATCCAAAAG 59.721 37.037 0.32 0.32 38.97 2.27
383 2967 7.038373 AGCCATTAGCCTCTTTTTAATCCAAAA 60.038 33.333 0.00 0.00 45.47 2.44
386 2970 5.518865 AGCCATTAGCCTCTTTTTAATCCA 58.481 37.500 0.00 0.00 45.47 3.41
387 2971 5.010112 GGAGCCATTAGCCTCTTTTTAATCC 59.990 44.000 0.00 0.00 45.47 3.01
388 2972 5.830457 AGGAGCCATTAGCCTCTTTTTAATC 59.170 40.000 0.00 0.00 45.47 1.75
389 2973 5.770919 AGGAGCCATTAGCCTCTTTTTAAT 58.229 37.500 0.00 0.00 45.47 1.40
390 2974 5.193099 AGGAGCCATTAGCCTCTTTTTAA 57.807 39.130 0.00 0.00 45.47 1.52
391 2975 4.683400 CGAGGAGCCATTAGCCTCTTTTTA 60.683 45.833 0.00 0.00 44.73 1.52
392 2976 3.625853 GAGGAGCCATTAGCCTCTTTTT 58.374 45.455 0.00 0.00 45.47 1.94
473 3058 8.915871 TGATCTCTTCTTTCTTTGTTTGTTTG 57.084 30.769 0.00 0.00 0.00 2.93
475 3060 9.525409 CAATGATCTCTTCTTTCTTTGTTTGTT 57.475 29.630 0.00 0.00 0.00 2.83
476 3061 8.139989 CCAATGATCTCTTCTTTCTTTGTTTGT 58.860 33.333 0.00 0.00 0.00 2.83
477 3062 7.115947 GCCAATGATCTCTTCTTTCTTTGTTTG 59.884 37.037 0.00 0.00 0.00 2.93
544 3129 2.525629 TTCTGGTGAGGCGGGACA 60.526 61.111 0.00 0.00 0.00 4.02
555 3140 1.696063 ATGTGCTGTTTGCTTCTGGT 58.304 45.000 0.00 0.00 43.37 4.00
571 3156 6.226787 CGAGAGAAGGCTCCATTTTATATGT 58.773 40.000 0.00 0.00 42.30 2.29
662 3250 2.040359 GGGAAGGGGAGGAGAGGG 60.040 72.222 0.00 0.00 0.00 4.30
691 3279 2.232696 GAGTGTGGAGGGAGAAGAAGAC 59.767 54.545 0.00 0.00 0.00 3.01
717 3316 0.593618 TCAGCTCAGTCAGTCACGAC 59.406 55.000 0.00 0.00 36.08 4.34
718 3317 0.877743 CTCAGCTCAGTCAGTCACGA 59.122 55.000 0.00 0.00 0.00 4.35
719 3318 0.732196 GCTCAGCTCAGTCAGTCACG 60.732 60.000 0.00 0.00 0.00 4.35
720 3319 0.602562 AGCTCAGCTCAGTCAGTCAC 59.397 55.000 0.00 0.00 30.62 3.67
726 3325 1.516821 CGCTCAGCTCAGCTCAGTC 60.517 63.158 8.35 0.00 36.40 3.51
757 3356 1.153529 CAGGCTCAGCTCAGCTCAG 60.154 63.158 10.24 0.00 36.40 3.35
758 3357 1.605971 CTCAGGCTCAGCTCAGCTCA 61.606 60.000 10.24 0.00 36.40 4.26
799 3398 2.575694 TTAAATCGGGCGCGTAACTA 57.424 45.000 23.19 3.21 0.00 2.24
904 3503 1.654954 GCGTAGGAGGTCAAGCGAGA 61.655 60.000 0.00 0.00 0.00 4.04
979 3588 0.542232 CCCCCTCTACCTATCCACCG 60.542 65.000 0.00 0.00 0.00 4.94
1012 3635 3.080121 CTTCAGGCTCCGGCTCCT 61.080 66.667 8.33 8.33 35.88 3.69
1193 3828 0.312729 AACAAACCGGCGTCAATTCC 59.687 50.000 6.01 0.00 0.00 3.01
1199 3838 2.247267 CACGAACAAACCGGCGTC 59.753 61.111 6.01 0.00 34.37 5.19
1214 3857 1.792118 AAGAAAGAAACGGCGGGCAC 61.792 55.000 13.24 0.00 0.00 5.01
1255 3898 7.224753 CCATAAAATCTCTGTATGTAACGCACT 59.775 37.037 0.00 0.00 0.00 4.40
1257 3900 6.481976 CCCATAAAATCTCTGTATGTAACGCA 59.518 38.462 0.00 0.00 0.00 5.24
1573 4216 3.087031 CAAACAGAGCATGTGGAGGAAT 58.913 45.455 0.00 0.00 43.00 3.01
1575 4218 1.883638 GCAAACAGAGCATGTGGAGGA 60.884 52.381 0.00 0.00 43.00 3.71
1590 4233 4.280929 AGACTACATTGGGGAAAAGCAAAC 59.719 41.667 0.00 0.00 0.00 2.93
1591 4234 4.479158 AGACTACATTGGGGAAAAGCAAA 58.521 39.130 0.00 0.00 0.00 3.68
1592 4235 4.112634 AGACTACATTGGGGAAAAGCAA 57.887 40.909 0.00 0.00 0.00 3.91
1617 4260 2.253452 GTCAGGCGACACGTACGT 59.747 61.111 16.72 16.72 42.13 3.57
1814 4463 0.175531 GAAGAGGAGGAGCAGAGTGC 59.824 60.000 0.00 0.00 45.46 4.40
1827 4501 2.840651 AGGAAGTGTACATGGGAAGAGG 59.159 50.000 0.00 0.00 0.00 3.69
1828 4502 3.772025 AGAGGAAGTGTACATGGGAAGAG 59.228 47.826 0.00 0.00 0.00 2.85
1829 4503 3.515502 CAGAGGAAGTGTACATGGGAAGA 59.484 47.826 0.00 0.00 0.00 2.87
1832 4506 2.902608 ACAGAGGAAGTGTACATGGGA 58.097 47.619 0.00 0.00 0.00 4.37
1834 4508 3.056821 TCGAACAGAGGAAGTGTACATGG 60.057 47.826 0.00 0.00 0.00 3.66
1835 4509 3.921021 GTCGAACAGAGGAAGTGTACATG 59.079 47.826 0.00 0.00 0.00 3.21
1836 4510 3.366070 CGTCGAACAGAGGAAGTGTACAT 60.366 47.826 0.00 0.00 36.91 2.29
1837 4511 2.031420 CGTCGAACAGAGGAAGTGTACA 60.031 50.000 0.00 0.00 36.91 2.90
1839 4513 1.538512 CCGTCGAACAGAGGAAGTGTA 59.461 52.381 0.00 0.00 36.91 2.90
1840 4514 0.314302 CCGTCGAACAGAGGAAGTGT 59.686 55.000 0.00 0.00 36.91 3.55
1842 4516 0.314302 CACCGTCGAACAGAGGAAGT 59.686 55.000 0.00 0.00 36.91 3.01
1885 4559 0.640768 CGAAGTCGGAAATCTGCGTC 59.359 55.000 0.00 0.00 37.69 5.19
2019 4704 2.015587 AGTACTGTACAGCTCCGCTAC 58.984 52.381 22.90 15.35 36.40 3.58
2023 4708 3.244814 CGTAGTAGTACTGTACAGCTCCG 59.755 52.174 22.90 14.14 0.00 4.63
2025 4710 4.629200 ACACGTAGTAGTACTGTACAGCTC 59.371 45.833 22.90 15.14 41.61 4.09
2045 4730 2.746362 CTCCTCTTCTTCAATGCCACAC 59.254 50.000 0.00 0.00 0.00 3.82
2072 4761 1.212490 CAATGCCACGTCGCCATTT 59.788 52.632 1.78 0.00 0.00 2.32
2074 4763 2.046411 TCAATGCCACGTCGCCAT 60.046 55.556 1.78 0.00 0.00 4.40
2255 4944 1.300697 GACACGTGCGGGAGAAACT 60.301 57.895 17.22 0.00 0.00 2.66
2258 4947 1.080093 GATGACACGTGCGGGAGAA 60.080 57.895 17.22 0.00 0.00 2.87
2259 4948 2.272447 TGATGACACGTGCGGGAGA 61.272 57.895 17.22 0.00 0.00 3.71
2260 4949 2.094659 GTGATGACACGTGCGGGAG 61.095 63.158 17.22 0.00 37.28 4.30
2261 4950 2.048597 GTGATGACACGTGCGGGA 60.049 61.111 17.22 0.00 37.28 5.14
2262 4951 3.118454 GGTGATGACACGTGCGGG 61.118 66.667 17.22 0.00 46.77 6.13
2265 4954 3.788766 GCCGGTGATGACACGTGC 61.789 66.667 17.22 9.30 46.77 5.34
2480 5171 1.203250 TGTACCTCTGTCATGGTGGGA 60.203 52.381 7.65 0.00 37.74 4.37
2517 5227 9.007901 GCAAGTGCAGAGGAAGAATATAATAAT 57.992 33.333 0.00 0.00 41.59 1.28
2518 5228 8.213679 AGCAAGTGCAGAGGAAGAATATAATAA 58.786 33.333 6.00 0.00 45.16 1.40
2519 5229 7.658982 CAGCAAGTGCAGAGGAAGAATATAATA 59.341 37.037 6.00 0.00 45.16 0.98
2520 5230 6.485984 CAGCAAGTGCAGAGGAAGAATATAAT 59.514 38.462 6.00 0.00 45.16 1.28
2521 5231 5.819379 CAGCAAGTGCAGAGGAAGAATATAA 59.181 40.000 6.00 0.00 45.16 0.98
2565 5275 3.569701 GGCTGAATTCTGAACTTTGTCCA 59.430 43.478 15.79 0.00 0.00 4.02
2590 5300 1.153066 TGCAAGTTTCGTGCTCCCA 60.153 52.632 8.77 0.00 42.69 4.37
2591 5301 1.576421 CTGCAAGTTTCGTGCTCCC 59.424 57.895 8.77 0.00 42.69 4.30
2592 5302 1.081840 GCTGCAAGTTTCGTGCTCC 60.082 57.895 8.77 0.00 42.69 4.70
2593 5303 0.239347 ATGCTGCAAGTTTCGTGCTC 59.761 50.000 6.36 2.67 42.69 4.26
2594 5304 0.670162 AATGCTGCAAGTTTCGTGCT 59.330 45.000 6.36 0.00 42.69 4.40
2595 5305 2.330231 TAATGCTGCAAGTTTCGTGC 57.670 45.000 6.36 1.17 42.55 5.34
2596 5306 4.726416 AGATTAATGCTGCAAGTTTCGTG 58.274 39.130 6.36 0.00 35.30 4.35
2597 5307 5.156355 CAAGATTAATGCTGCAAGTTTCGT 58.844 37.500 6.36 0.00 35.30 3.85
2598 5308 5.156355 ACAAGATTAATGCTGCAAGTTTCG 58.844 37.500 6.36 0.00 35.30 3.46
2599 5309 7.201266 CGTTACAAGATTAATGCTGCAAGTTTC 60.201 37.037 6.36 2.17 35.30 2.78
2600 5310 6.582295 CGTTACAAGATTAATGCTGCAAGTTT 59.418 34.615 6.36 0.00 35.30 2.66
2601 5311 6.086222 CGTTACAAGATTAATGCTGCAAGTT 58.914 36.000 6.36 0.00 35.30 2.66
2602 5312 5.631026 CGTTACAAGATTAATGCTGCAAGT 58.369 37.500 6.36 0.00 35.30 3.16
2603 5313 4.496895 GCGTTACAAGATTAATGCTGCAAG 59.503 41.667 6.36 0.00 39.79 4.01
2604 5314 4.411327 GCGTTACAAGATTAATGCTGCAA 58.589 39.130 6.36 0.00 39.79 4.08
2605 5315 4.014847 GCGTTACAAGATTAATGCTGCA 57.985 40.909 4.13 4.13 39.79 4.41
2636 5359 1.078778 ACGCCATGTATGTCGGCAA 60.079 52.632 0.00 0.00 46.60 4.52
2654 5381 2.264813 GCGTTATTTAGTGCTGGTCGA 58.735 47.619 0.00 0.00 0.00 4.20
2658 5385 1.730064 ACGTGCGTTATTTAGTGCTGG 59.270 47.619 0.00 0.00 0.00 4.85
2706 5439 1.000283 CGCAGGTTCTATCTAGGGCAG 60.000 57.143 0.00 0.00 0.00 4.85
2745 5478 5.892686 GTCAGACCTACTACCCTAACATCTT 59.107 44.000 0.00 0.00 0.00 2.40
2753 5486 3.054213 GTCAGAGTCAGACCTACTACCCT 60.054 52.174 4.37 0.00 0.00 4.34
2790 5523 1.734748 CATGCATGGTTATGGCGCA 59.265 52.632 19.40 0.00 34.79 6.09
2809 5542 1.338960 GGTTTCAATTGGTGGCCCATG 60.339 52.381 5.42 0.00 41.49 3.66
2810 5543 0.983467 GGTTTCAATTGGTGGCCCAT 59.017 50.000 5.42 0.00 41.49 4.00
2811 5544 1.124477 GGGTTTCAATTGGTGGCCCA 61.124 55.000 17.40 0.00 39.65 5.36
2812 5545 1.676968 GGGTTTCAATTGGTGGCCC 59.323 57.895 5.42 8.78 0.00 5.80
2813 5546 0.835971 AGGGGTTTCAATTGGTGGCC 60.836 55.000 5.42 0.00 0.00 5.36
2814 5547 0.608130 GAGGGGTTTCAATTGGTGGC 59.392 55.000 5.42 0.00 0.00 5.01
2816 5549 2.171003 GGAGAGGGGTTTCAATTGGTG 58.829 52.381 5.42 0.00 0.00 4.17
2817 5550 1.077169 GGGAGAGGGGTTTCAATTGGT 59.923 52.381 5.42 0.00 0.00 3.67
2818 5551 1.359130 AGGGAGAGGGGTTTCAATTGG 59.641 52.381 5.42 0.00 0.00 3.16
2819 5552 2.907458 AGGGAGAGGGGTTTCAATTG 57.093 50.000 0.00 0.00 0.00 2.32
2868 5601 8.480133 AGGAATATAGGTAGTAGTTGTCCTTG 57.520 38.462 0.00 0.00 0.00 3.61
2881 5614 7.310237 GCCGGAACAAGAATAGGAATATAGGTA 60.310 40.741 5.05 0.00 0.00 3.08
2913 5659 0.315251 GCAGGGCAAGAGGTTTGTTC 59.685 55.000 0.00 0.00 0.00 3.18
2991 5739 2.604046 AGAAGCGCTTCGGATAATGT 57.396 45.000 36.88 19.39 43.97 2.71
3004 5752 1.389106 GCACGTACCTTGTAAGAAGCG 59.611 52.381 0.00 0.00 0.00 4.68
3045 5801 3.702045 ACTACTAGAATGACAGAGGTGGC 59.298 47.826 0.00 0.00 0.00 5.01
3049 5805 7.720074 TGTATGGTACTACTAGAATGACAGAGG 59.280 40.741 0.00 0.00 0.00 3.69
3151 5911 1.761784 ACTAGATCCTTCCAGCAGCTG 59.238 52.381 16.23 16.23 0.00 4.24
3228 6001 5.712752 TGCAGATTACTACTAGTATGGGGT 58.287 41.667 2.33 0.43 29.64 4.95
3229 6002 5.186021 CCTGCAGATTACTACTAGTATGGGG 59.814 48.000 17.39 0.00 29.64 4.96
3230 6003 5.775701 ACCTGCAGATTACTACTAGTATGGG 59.224 44.000 17.39 0.00 29.64 4.00
3231 6004 6.490381 TGACCTGCAGATTACTACTAGTATGG 59.510 42.308 17.39 0.00 29.64 2.74
3232 6005 7.364200 GTGACCTGCAGATTACTACTAGTATG 58.636 42.308 17.39 0.00 29.64 2.39
3233 6006 6.490721 GGTGACCTGCAGATTACTACTAGTAT 59.509 42.308 17.39 0.00 29.64 2.12
3234 6007 5.826737 GGTGACCTGCAGATTACTACTAGTA 59.173 44.000 17.39 1.89 0.00 1.82
3235 6008 4.645588 GGTGACCTGCAGATTACTACTAGT 59.354 45.833 17.39 0.00 0.00 2.57
3248 6021 1.357137 TGGACTAATGGTGACCTGCA 58.643 50.000 2.11 0.00 0.00 4.41
3292 6065 2.432300 CCCGGGCGAGATGGTTACT 61.432 63.158 8.08 0.00 0.00 2.24
3309 6082 7.726033 TTCAGATAGCTAGGGAGATTATTCC 57.274 40.000 0.00 0.00 36.46 3.01
3329 6102 9.092322 GCGTCGATGTTAATATTATGTTTTCAG 57.908 33.333 6.48 0.00 0.00 3.02
3330 6103 8.604890 TGCGTCGATGTTAATATTATGTTTTCA 58.395 29.630 6.48 0.00 0.00 2.69
3331 6104 8.981370 TGCGTCGATGTTAATATTATGTTTTC 57.019 30.769 6.48 0.00 0.00 2.29
3332 6105 9.776158 TTTGCGTCGATGTTAATATTATGTTTT 57.224 25.926 6.48 0.00 0.00 2.43
3334 6107 9.944663 ATTTTGCGTCGATGTTAATATTATGTT 57.055 25.926 6.48 0.00 0.00 2.71
3335 6108 9.944663 AATTTTGCGTCGATGTTAATATTATGT 57.055 25.926 6.48 0.00 0.00 2.29
3343 6116 9.440784 GGATTATTAATTTTGCGTCGATGTTAA 57.559 29.630 6.48 3.44 0.00 2.01
3350 6123 9.749490 AATATACGGATTATTAATTTTGCGTCG 57.251 29.630 16.26 5.75 37.36 5.12
3380 6154 3.297134 TGGGCTCTATTTGATTGGACC 57.703 47.619 0.00 0.00 0.00 4.46
3404 6178 3.081710 TGTGTGTAGCAGGCTAGTCTA 57.918 47.619 0.00 0.00 0.00 2.59
3449 6223 0.904649 CCCTGACAGACATGCTACCA 59.095 55.000 3.32 0.00 0.00 3.25
3501 6298 1.531677 CCAAGCAACTGACACAACGTG 60.532 52.381 0.00 0.00 39.75 4.49
3533 6349 1.668919 CCTCGCGAGTGAGCTTAAACA 60.669 52.381 32.41 0.00 34.56 2.83
3591 6408 1.258445 ACGGGTTTGGTTTGGTGCAA 61.258 50.000 0.00 0.00 0.00 4.08
3614 6431 2.931228 AGACAAGCTAGTCGACGAAAC 58.069 47.619 10.46 1.25 43.24 2.78
3617 6434 3.688185 ACAATAGACAAGCTAGTCGACGA 59.312 43.478 10.46 3.61 43.24 4.20
3635 6452 1.350351 AGCAGAGCAGACCAAGACAAT 59.650 47.619 0.00 0.00 0.00 2.71
3643 6460 0.461693 GATGTCCAGCAGAGCAGACC 60.462 60.000 8.91 0.00 34.62 3.85
3666 6483 3.392947 TGATCCTAGTTGGTTTGGTGTGA 59.607 43.478 0.00 0.00 37.07 3.58
3669 6486 3.502211 GTGTGATCCTAGTTGGTTTGGTG 59.498 47.826 0.00 0.00 37.07 4.17
3670 6487 3.137544 TGTGTGATCCTAGTTGGTTTGGT 59.862 43.478 0.00 0.00 37.07 3.67
3671 6488 3.502211 GTGTGTGATCCTAGTTGGTTTGG 59.498 47.826 0.00 0.00 37.07 3.28
3672 6489 4.024048 GTGTGTGTGATCCTAGTTGGTTTG 60.024 45.833 0.00 0.00 37.07 2.93
3673 6490 4.134563 GTGTGTGTGATCCTAGTTGGTTT 58.865 43.478 0.00 0.00 37.07 3.27
3745 6563 4.065088 TGCCTCTGATTTTCGTATATGGC 58.935 43.478 0.00 0.00 37.38 4.40
3811 6632 5.363562 TCCAGCTGGGATATATATTGCTG 57.636 43.478 32.23 21.17 42.15 4.41
3826 6647 0.676151 GAGACAGGCCTTTCCAGCTG 60.676 60.000 15.46 6.78 37.29 4.24
3852 6679 0.955919 GAAGTTGAAGCTCCCGTGGG 60.956 60.000 0.00 0.00 0.00 4.61
3894 6743 6.071840 AGCTTCCATAATTAGGCTCTAGTACG 60.072 42.308 0.00 0.00 0.00 3.67
3934 6783 6.149973 TCACTAACAGAAGATTCAATGCCAAG 59.850 38.462 0.00 0.00 0.00 3.61
3936 6785 5.559770 TCACTAACAGAAGATTCAATGCCA 58.440 37.500 0.00 0.00 0.00 4.92
3937 6786 5.645497 ACTCACTAACAGAAGATTCAATGCC 59.355 40.000 0.00 0.00 0.00 4.40
3951 6800 0.104882 TCCCCACCCACTCACTAACA 60.105 55.000 0.00 0.00 0.00 2.41
3955 6804 0.475632 TCATTCCCCACCCACTCACT 60.476 55.000 0.00 0.00 0.00 3.41
3961 6810 1.077298 AACCCTTCATTCCCCACCCA 61.077 55.000 0.00 0.00 0.00 4.51
3963 6812 1.063942 CCTAACCCTTCATTCCCCACC 60.064 57.143 0.00 0.00 0.00 4.61
3969 6818 3.934068 TCGTTGTCCTAACCCTTCATTC 58.066 45.455 0.00 0.00 0.00 2.67
3970 6819 4.070009 GTTCGTTGTCCTAACCCTTCATT 58.930 43.478 0.00 0.00 0.00 2.57
3971 6820 3.558533 GGTTCGTTGTCCTAACCCTTCAT 60.559 47.826 0.00 0.00 37.31 2.57
3972 6821 2.224354 GGTTCGTTGTCCTAACCCTTCA 60.224 50.000 0.00 0.00 37.31 3.02
3976 6825 0.671472 CCGGTTCGTTGTCCTAACCC 60.671 60.000 0.00 0.00 39.63 4.11
3993 6845 2.093128 AGTAAAATAGCCAGGTCACCCG 60.093 50.000 0.00 0.00 35.12 5.28
3997 6849 3.370527 GCCAGAGTAAAATAGCCAGGTCA 60.371 47.826 0.00 0.00 0.00 4.02
4000 6852 3.567478 AGCCAGAGTAAAATAGCCAGG 57.433 47.619 0.00 0.00 0.00 4.45
4007 6859 6.151817 GTCATCTTCCAAAGCCAGAGTAAAAT 59.848 38.462 0.00 0.00 0.00 1.82
4036 6888 1.880027 CCAAAAGGACAAGAAGACCCG 59.120 52.381 0.00 0.00 31.96 5.28
4046 6898 1.976474 GGATGCGGCCAAAAGGACA 60.976 57.895 2.24 0.00 0.00 4.02
4064 6916 1.755783 GGCCATTCTTGGGAGCTGG 60.756 63.158 0.00 0.00 43.84 4.85
4138 7012 4.711846 TCCCGTGAGTCAGTAGTAGTAGTA 59.288 45.833 0.00 0.00 0.00 1.82
4139 7013 3.517100 TCCCGTGAGTCAGTAGTAGTAGT 59.483 47.826 0.00 0.00 0.00 2.73
4140 7014 4.134379 TCCCGTGAGTCAGTAGTAGTAG 57.866 50.000 0.00 0.00 0.00 2.57
4141 7015 4.511527 CTTCCCGTGAGTCAGTAGTAGTA 58.488 47.826 0.00 0.00 0.00 1.82
4142 7016 3.345414 CTTCCCGTGAGTCAGTAGTAGT 58.655 50.000 0.00 0.00 0.00 2.73
4143 7017 2.683867 CCTTCCCGTGAGTCAGTAGTAG 59.316 54.545 0.00 0.00 0.00 2.57
4144 7018 2.719739 CCTTCCCGTGAGTCAGTAGTA 58.280 52.381 0.00 0.00 0.00 1.82
4145 7019 1.546961 CCTTCCCGTGAGTCAGTAGT 58.453 55.000 0.00 0.00 0.00 2.73
4146 7020 0.173708 GCCTTCCCGTGAGTCAGTAG 59.826 60.000 0.00 0.00 0.00 2.57
4213 7094 0.521735 GTTTTGTTGGCTAGCCTCGG 59.478 55.000 33.07 0.00 36.94 4.63
4253 7134 0.250295 CTTCGGTTGGAGCAGACCAA 60.250 55.000 6.05 6.05 46.02 3.67
4269 7161 5.012328 AGACTAATCCGTGATTGGACTTC 57.988 43.478 13.97 4.83 41.85 3.01
4290 7182 3.560902 ACAGTGTATCGGCGATGATAG 57.439 47.619 31.08 18.43 31.72 2.08
4298 7190 2.543238 GCTAGTGGTACAGTGTATCGGC 60.543 54.545 6.21 5.69 44.58 5.54
4300 7192 3.128068 TGTGCTAGTGGTACAGTGTATCG 59.872 47.826 6.21 0.00 44.58 2.92
4301 7193 4.713824 TGTGCTAGTGGTACAGTGTATC 57.286 45.455 6.21 6.42 44.58 2.24
4304 7196 5.892119 AGTATATGTGCTAGTGGTACAGTGT 59.108 40.000 0.00 0.00 44.58 3.55
4311 7203 6.553476 TGATGGTAAGTATATGTGCTAGTGGT 59.447 38.462 0.00 0.00 0.00 4.16
4369 7265 0.096281 CAGTCGAGTCTCTGCGAGTC 59.904 60.000 0.00 0.00 38.04 3.36
4370 7266 0.604243 ACAGTCGAGTCTCTGCGAGT 60.604 55.000 10.68 0.00 40.49 4.18
4371 7267 0.519519 AACAGTCGAGTCTCTGCGAG 59.480 55.000 10.68 0.00 37.18 5.03
4374 7270 2.474816 ACAAAACAGTCGAGTCTCTGC 58.525 47.619 10.68 0.00 35.37 4.26
4380 7276 8.751302 AACAAAATAAAACAAAACAGTCGAGT 57.249 26.923 0.00 0.00 0.00 4.18
4398 7294 7.639945 TCGTTTTCCAACAAACAAAACAAAAT 58.360 26.923 7.16 0.00 39.12 1.82
4408 7304 5.390040 CCCAAAACTTCGTTTTCCAACAAAC 60.390 40.000 2.01 0.00 42.78 2.93
4410 7306 4.246458 CCCAAAACTTCGTTTTCCAACAA 58.754 39.130 2.01 0.00 42.78 2.83
4411 7307 3.368531 CCCCAAAACTTCGTTTTCCAACA 60.369 43.478 2.01 0.00 42.78 3.33
4412 7308 3.191669 CCCCAAAACTTCGTTTTCCAAC 58.808 45.455 2.01 0.00 42.78 3.77
4413 7309 2.168728 CCCCCAAAACTTCGTTTTCCAA 59.831 45.455 2.01 0.00 42.78 3.53
4414 7310 1.757699 CCCCCAAAACTTCGTTTTCCA 59.242 47.619 2.01 0.00 42.78 3.53
4419 7315 2.028876 CTTCACCCCCAAAACTTCGTT 58.971 47.619 0.00 0.00 0.00 3.85
4420 7316 1.064240 ACTTCACCCCCAAAACTTCGT 60.064 47.619 0.00 0.00 0.00 3.85
4421 7317 1.336755 CACTTCACCCCCAAAACTTCG 59.663 52.381 0.00 0.00 0.00 3.79
4422 7318 2.384828 ACACTTCACCCCCAAAACTTC 58.615 47.619 0.00 0.00 0.00 3.01
4423 7319 2.543037 ACACTTCACCCCCAAAACTT 57.457 45.000 0.00 0.00 0.00 2.66
4424 7320 2.543037 AACACTTCACCCCCAAAACT 57.457 45.000 0.00 0.00 0.00 2.66
4425 7321 2.498078 TGAAACACTTCACCCCCAAAAC 59.502 45.455 0.00 0.00 36.62 2.43
4426 7322 2.763448 CTGAAACACTTCACCCCCAAAA 59.237 45.455 0.00 0.00 36.62 2.44
4427 7323 2.291930 ACTGAAACACTTCACCCCCAAA 60.292 45.455 0.00 0.00 36.62 3.28
4428 7324 1.286553 ACTGAAACACTTCACCCCCAA 59.713 47.619 0.00 0.00 36.62 4.12
4429 7325 0.923358 ACTGAAACACTTCACCCCCA 59.077 50.000 0.00 0.00 36.62 4.96
4430 7326 2.067365 AACTGAAACACTTCACCCCC 57.933 50.000 0.00 0.00 36.62 5.40
4431 7327 2.100749 CCAAACTGAAACACTTCACCCC 59.899 50.000 0.00 0.00 36.62 4.95
4436 7332 4.105486 GTTGCTCCAAACTGAAACACTTC 58.895 43.478 0.00 0.00 0.00 3.01
4439 7335 2.450160 CGTTGCTCCAAACTGAAACAC 58.550 47.619 0.00 0.00 0.00 3.32
4452 7348 2.050985 GCACACCAAGCGTTGCTC 60.051 61.111 0.00 0.00 38.25 4.26
4458 7354 0.386352 CTGAATGTGCACACCAAGCG 60.386 55.000 24.37 7.91 33.85 4.68
4476 7372 7.657761 GGCAGCTGAATTAGTAACATACATACT 59.342 37.037 20.43 0.00 37.39 2.12
4480 7376 5.739959 TGGCAGCTGAATTAGTAACATACA 58.260 37.500 20.43 0.00 0.00 2.29
4481 7377 6.867662 ATGGCAGCTGAATTAGTAACATAC 57.132 37.500 20.43 0.00 0.00 2.39
4486 7382 5.744171 TCAGAATGGCAGCTGAATTAGTAA 58.256 37.500 20.43 0.90 38.14 2.24
4495 7393 3.014623 TCAAGATTCAGAATGGCAGCTG 58.985 45.455 10.11 10.11 36.16 4.24
4498 7396 5.293814 CACTACTCAAGATTCAGAATGGCAG 59.706 44.000 0.00 0.00 36.16 4.85
4511 7409 6.039829 CAGATACATACAGCCACTACTCAAGA 59.960 42.308 0.00 0.00 0.00 3.02
4512 7410 6.039829 TCAGATACATACAGCCACTACTCAAG 59.960 42.308 0.00 0.00 0.00 3.02
4518 7416 8.046708 ACAAAATTCAGATACATACAGCCACTA 58.953 33.333 0.00 0.00 0.00 2.74
4520 7418 6.968904 CACAAAATTCAGATACATACAGCCAC 59.031 38.462 0.00 0.00 0.00 5.01
4521 7419 6.404623 GCACAAAATTCAGATACATACAGCCA 60.405 38.462 0.00 0.00 0.00 4.75
4522 7420 5.973565 GCACAAAATTCAGATACATACAGCC 59.026 40.000 0.00 0.00 0.00 4.85
4523 7421 6.789262 AGCACAAAATTCAGATACATACAGC 58.211 36.000 0.00 0.00 0.00 4.40
4524 7422 8.453320 TGAAGCACAAAATTCAGATACATACAG 58.547 33.333 0.00 0.00 31.93 2.74
4525 7423 8.236586 GTGAAGCACAAAATTCAGATACATACA 58.763 33.333 0.00 0.00 36.16 2.29
4526 7424 8.454106 AGTGAAGCACAAAATTCAGATACATAC 58.546 33.333 0.00 0.00 36.16 2.39
4527 7425 8.453320 CAGTGAAGCACAAAATTCAGATACATA 58.547 33.333 0.00 0.00 36.16 2.29
4528 7426 7.175467 TCAGTGAAGCACAAAATTCAGATACAT 59.825 33.333 0.00 0.00 36.16 2.29
4531 7429 6.712095 AGTCAGTGAAGCACAAAATTCAGATA 59.288 34.615 0.00 0.00 36.16 1.98
4543 7441 1.268743 GCAACCAAGTCAGTGAAGCAC 60.269 52.381 0.00 0.00 34.10 4.40
4546 7444 1.679139 TGGCAACCAAGTCAGTGAAG 58.321 50.000 0.00 0.00 0.00 3.02
4547 7445 1.955778 CATGGCAACCAAGTCAGTGAA 59.044 47.619 0.00 0.00 36.95 3.18
4550 7448 0.540365 CCCATGGCAACCAAGTCAGT 60.540 55.000 6.09 0.00 36.95 3.41
4551 7449 0.540365 ACCCATGGCAACCAAGTCAG 60.540 55.000 6.09 0.00 36.95 3.51
4552 7450 0.827089 CACCCATGGCAACCAAGTCA 60.827 55.000 6.09 0.00 36.95 3.41
4553 7451 0.539438 TCACCCATGGCAACCAAGTC 60.539 55.000 6.09 0.00 36.95 3.01
4555 7453 1.066716 CAATCACCCATGGCAACCAAG 60.067 52.381 6.09 0.00 36.95 3.61
4556 7454 0.975135 CAATCACCCATGGCAACCAA 59.025 50.000 6.09 0.00 36.95 3.67
4557 7455 0.113972 TCAATCACCCATGGCAACCA 59.886 50.000 6.09 0.00 38.19 3.67
4558 7456 0.532115 GTCAATCACCCATGGCAACC 59.468 55.000 6.09 0.00 0.00 3.77
4559 7457 0.171007 CGTCAATCACCCATGGCAAC 59.829 55.000 6.09 0.00 0.00 4.17
4560 7458 0.964860 CCGTCAATCACCCATGGCAA 60.965 55.000 6.09 0.00 0.00 4.52
4561 7459 1.378382 CCGTCAATCACCCATGGCA 60.378 57.895 6.09 0.00 0.00 4.92
4562 7460 2.774799 GCCGTCAATCACCCATGGC 61.775 63.158 6.09 0.00 35.09 4.40
4563 7461 1.378382 TGCCGTCAATCACCCATGG 60.378 57.895 4.14 4.14 0.00 3.66
4564 7462 1.378882 CCTGCCGTCAATCACCCATG 61.379 60.000 0.00 0.00 0.00 3.66
4566 7464 2.350895 CCTGCCGTCAATCACCCA 59.649 61.111 0.00 0.00 0.00 4.51
4567 7465 2.040544 CACCTGCCGTCAATCACCC 61.041 63.158 0.00 0.00 0.00 4.61
4568 7466 2.690778 GCACCTGCCGTCAATCACC 61.691 63.158 0.00 0.00 34.31 4.02
4569 7467 1.672356 AGCACCTGCCGTCAATCAC 60.672 57.895 0.00 0.00 43.38 3.06
4570 7468 1.672030 CAGCACCTGCCGTCAATCA 60.672 57.895 0.00 0.00 43.38 2.57
4571 7469 2.401766 CCAGCACCTGCCGTCAATC 61.402 63.158 0.00 0.00 43.38 2.67
4572 7470 2.360350 CCAGCACCTGCCGTCAAT 60.360 61.111 0.00 0.00 43.38 2.57
4573 7471 3.535629 CTCCAGCACCTGCCGTCAA 62.536 63.158 0.00 0.00 43.38 3.18
4574 7472 4.007644 CTCCAGCACCTGCCGTCA 62.008 66.667 0.00 0.00 43.38 4.35
4703 7607 1.583856 GTCGTAGTCATCGTCGTCGTA 59.416 52.381 1.33 0.00 38.33 3.43
4732 7636 0.542232 AGGGTATCGAGGGGGAATCG 60.542 60.000 0.00 0.00 41.50 3.34
4759 7663 2.703798 ATTGGCGTGGATGCTGCAC 61.704 57.895 3.57 0.00 35.21 4.57
4770 7674 6.017109 GGACTAATGTAATCAATCATTGGCGT 60.017 38.462 0.00 0.00 36.47 5.68
4838 7742 4.178956 TCTCCTAAGCCAAAAACCAAGT 57.821 40.909 0.00 0.00 0.00 3.16
4843 7749 3.344515 ACCGATCTCCTAAGCCAAAAAC 58.655 45.455 0.00 0.00 0.00 2.43
4880 7788 7.151999 ACACTGATGATATAATCGAGAGGAC 57.848 40.000 0.00 0.00 0.00 3.85
5021 8261 2.639286 GCTGTCAGCACGGGTTTG 59.361 61.111 20.16 0.00 41.89 2.93
5040 8280 7.754834 GTCAGATGACCAGATCAGACGATCG 62.755 52.000 14.88 14.88 44.23 3.69
5041 8281 4.556501 GTCAGATGACCAGATCAGACGATC 60.557 50.000 1.33 0.00 41.91 3.69
5185 8428 2.289756 CCTCAGCTCAGATCCATCCATG 60.290 54.545 0.00 0.00 0.00 3.66
5189 8432 0.319727 CGCCTCAGCTCAGATCCATC 60.320 60.000 0.00 0.00 36.60 3.51
5190 8433 0.758310 TCGCCTCAGCTCAGATCCAT 60.758 55.000 0.00 0.00 36.60 3.41
5191 8434 1.380380 TCGCCTCAGCTCAGATCCA 60.380 57.895 0.00 0.00 36.60 3.41
5192 8435 1.363443 CTCGCCTCAGCTCAGATCC 59.637 63.158 0.00 0.00 36.60 3.36
5193 8436 1.300080 GCTCGCCTCAGCTCAGATC 60.300 63.158 0.00 0.00 36.38 2.75
5194 8437 1.611474 TTGCTCGCCTCAGCTCAGAT 61.611 55.000 0.00 0.00 40.39 2.90
5195 8438 2.223200 CTTGCTCGCCTCAGCTCAGA 62.223 60.000 0.00 0.00 40.39 3.27
5196 8439 1.810441 CTTGCTCGCCTCAGCTCAG 60.810 63.158 0.00 0.00 40.39 3.35
5197 8440 1.611474 ATCTTGCTCGCCTCAGCTCA 61.611 55.000 0.00 0.00 40.39 4.26
5198 8441 0.461693 AATCTTGCTCGCCTCAGCTC 60.462 55.000 0.00 0.00 40.39 4.09
5199 8442 0.826715 TAATCTTGCTCGCCTCAGCT 59.173 50.000 0.00 0.00 40.39 4.24
5212 8455 6.096846 AGGACCATTTGCGCTTTAATAATCTT 59.903 34.615 9.73 1.39 0.00 2.40
5262 8505 2.267351 CGGGCATGTGGCTGTTCAA 61.267 57.895 7.19 0.00 44.01 2.69
5268 8511 4.722700 GGTGTCGGGCATGTGGCT 62.723 66.667 6.52 0.00 44.01 4.75
5296 8543 1.079336 GAAGGACCCCGAACCGAAG 60.079 63.158 0.00 0.00 0.00 3.79
5406 8671 4.915667 TGTAGAGATTTCACTGAACGAACG 59.084 41.667 0.00 0.00 0.00 3.95
5436 8701 9.745880 CAGCTACTTCCTTCGTTTCTAAATATA 57.254 33.333 0.00 0.00 0.00 0.86
5437 8702 7.224949 GCAGCTACTTCCTTCGTTTCTAAATAT 59.775 37.037 0.00 0.00 0.00 1.28
5438 8703 6.534079 GCAGCTACTTCCTTCGTTTCTAAATA 59.466 38.462 0.00 0.00 0.00 1.40
5442 8707 3.672511 CGCAGCTACTTCCTTCGTTTCTA 60.673 47.826 0.00 0.00 0.00 2.10
5444 8709 1.390463 CGCAGCTACTTCCTTCGTTTC 59.610 52.381 0.00 0.00 0.00 2.78
5446 8711 0.601558 TCGCAGCTACTTCCTTCGTT 59.398 50.000 0.00 0.00 0.00 3.85
5447 8712 0.601558 TTCGCAGCTACTTCCTTCGT 59.398 50.000 0.00 0.00 0.00 3.85
5448 8713 1.710013 TTTCGCAGCTACTTCCTTCG 58.290 50.000 0.00 0.00 0.00 3.79
5449 8714 3.181506 CCATTTTCGCAGCTACTTCCTTC 60.182 47.826 0.00 0.00 0.00 3.46
5451 8716 2.359900 CCATTTTCGCAGCTACTTCCT 58.640 47.619 0.00 0.00 0.00 3.36
5452 8717 1.202188 GCCATTTTCGCAGCTACTTCC 60.202 52.381 0.00 0.00 0.00 3.46
5453 8718 1.202188 GGCCATTTTCGCAGCTACTTC 60.202 52.381 0.00 0.00 0.00 3.01
5454 8719 0.811281 GGCCATTTTCGCAGCTACTT 59.189 50.000 0.00 0.00 0.00 2.24
5455 8720 1.369091 CGGCCATTTTCGCAGCTACT 61.369 55.000 2.24 0.00 0.00 2.57
5490 8761 2.997315 CGTGGGACAGAGGGAGCA 60.997 66.667 0.00 0.00 41.80 4.26
5491 8762 3.775654 CCGTGGGACAGAGGGAGC 61.776 72.222 0.00 0.00 41.80 4.70
5499 8770 2.658285 ACGATCTTATACCGTGGGACA 58.342 47.619 0.00 0.00 35.02 4.02
5524 8795 4.959522 TCCCCCTCCGTCTCATAATATA 57.040 45.455 0.00 0.00 0.00 0.86
5525 8796 3.847042 TCCCCCTCCGTCTCATAATAT 57.153 47.619 0.00 0.00 0.00 1.28
5526 8797 3.116862 ACTTCCCCCTCCGTCTCATAATA 60.117 47.826 0.00 0.00 0.00 0.98
5527 8798 2.330216 CTTCCCCCTCCGTCTCATAAT 58.670 52.381 0.00 0.00 0.00 1.28
5528 8799 1.007963 ACTTCCCCCTCCGTCTCATAA 59.992 52.381 0.00 0.00 0.00 1.90
5531 9679 0.033405 CTACTTCCCCCTCCGTCTCA 60.033 60.000 0.00 0.00 0.00 3.27
5535 9683 0.635009 TGATCTACTTCCCCCTCCGT 59.365 55.000 0.00 0.00 0.00 4.69
5545 9693 5.418209 AGGTAGCACTACGTTTGATCTACTT 59.582 40.000 0.00 0.00 36.94 2.24
5546 9694 4.948621 AGGTAGCACTACGTTTGATCTACT 59.051 41.667 0.00 0.00 36.94 2.57
5562 9710 3.623703 TCCATACGTACTCAAGGTAGCA 58.376 45.455 0.00 0.00 32.27 3.49
5574 9722 0.662085 TACGCACGCATCCATACGTA 59.338 50.000 0.00 0.00 41.32 3.57
5576 9724 0.317519 TCTACGCACGCATCCATACG 60.318 55.000 0.00 0.00 0.00 3.06
5640 10412 2.935955 GTTTCCTGTGGTCACGCG 59.064 61.111 3.53 3.53 0.00 6.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.