Multiple sequence alignment - TraesCS2B01G531900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G531900 chr2B 100.000 3485 0 0 1 3485 727244808 727241324 0.000000e+00 6436.0
1 TraesCS2B01G531900 chr2B 89.958 1663 113 17 886 2537 727317647 727316028 0.000000e+00 2097.0
2 TraesCS2B01G531900 chr2B 95.620 274 9 3 2507 2780 526266952 526267222 1.490000e-118 436.0
3 TraesCS2B01G531900 chr2B 88.603 272 30 1 2804 3075 727314557 727314287 2.590000e-86 329.0
4 TraesCS2B01G531900 chr2B 90.535 243 21 2 3130 3371 727314274 727314033 1.560000e-83 320.0
5 TraesCS2B01G531900 chr2B 76.357 571 115 15 2912 3472 727653162 727653722 4.400000e-74 289.0
6 TraesCS2B01G531900 chr2B 73.840 237 41 10 425 651 779864676 779864451 1.340000e-09 75.0
7 TraesCS2B01G531900 chr2A 92.195 1640 86 21 887 2489 732990151 732988517 0.000000e+00 2281.0
8 TraesCS2B01G531900 chr2A 95.251 716 27 5 2772 3485 732988507 732987797 0.000000e+00 1127.0
9 TraesCS2B01G531900 chr2A 82.523 555 53 24 195 733 732996259 732995733 6.860000e-122 448.0
10 TraesCS2B01G531900 chr2A 76.895 541 105 16 2942 3472 733039917 733040447 4.400000e-74 289.0
11 TraesCS2B01G531900 chr2A 91.463 82 2 2 777 853 732995620 732995539 1.320000e-19 108.0
12 TraesCS2B01G531900 chr2D 91.290 1481 94 16 1015 2480 598735171 598733711 0.000000e+00 1988.0
13 TraesCS2B01G531900 chr2D 94.670 713 30 5 2776 3485 598733624 598732917 0.000000e+00 1099.0
14 TraesCS2B01G531900 chr2D 76.481 574 109 20 2912 3472 598745747 598746307 4.400000e-74 289.0
15 TraesCS2B01G531900 chr4B 97.727 264 5 1 2515 2778 483338979 483338717 1.470000e-123 453.0
16 TraesCS2B01G531900 chr4B 96.642 268 8 1 2512 2779 277811256 277811522 8.880000e-121 444.0
17 TraesCS2B01G531900 chr6B 96.617 266 8 1 2515 2780 556846131 556846395 1.150000e-119 440.0
18 TraesCS2B01G531900 chr6B 95.588 272 10 2 2512 2782 684933405 684933135 5.340000e-118 435.0
19 TraesCS2B01G531900 chr6B 83.085 201 23 9 535 730 616309435 616309629 4.620000e-39 172.0
20 TraesCS2B01G531900 chr3B 95.324 278 11 2 2511 2787 740805887 740805611 1.150000e-119 440.0
21 TraesCS2B01G531900 chr3B 95.273 275 12 1 2512 2786 19251084 19251357 5.340000e-118 435.0
22 TraesCS2B01G531900 chr3B 91.150 113 9 1 4 115 4417089 4416977 6.020000e-33 152.0
23 TraesCS2B01G531900 chr3B 91.150 113 9 1 4 115 555115461 555115349 6.020000e-33 152.0
24 TraesCS2B01G531900 chrUn 96.591 264 8 1 2515 2778 124737952 124738214 1.490000e-118 436.0
25 TraesCS2B01G531900 chrUn 92.241 116 8 1 1 115 10641101 10641216 2.780000e-36 163.0
26 TraesCS2B01G531900 chrUn 85.987 157 16 4 535 691 400000396 400000246 2.780000e-36 163.0
27 TraesCS2B01G531900 chr1B 95.238 273 12 1 2513 2785 449389283 449389012 6.910000e-117 431.0
28 TraesCS2B01G531900 chr1B 91.304 115 10 0 1 115 670051223 670051337 1.290000e-34 158.0
29 TraesCS2B01G531900 chr7D 87.898 157 11 8 535 690 433803642 433803791 9.940000e-41 178.0
30 TraesCS2B01G531900 chr7B 82.297 209 26 9 525 733 388828164 388828361 1.660000e-38 171.0
31 TraesCS2B01G531900 chr7B 85.030 167 17 7 525 691 388807780 388807938 2.780000e-36 163.0
32 TraesCS2B01G531900 chr7B 85.030 167 17 7 525 691 388814157 388814315 2.780000e-36 163.0
33 TraesCS2B01G531900 chr7B 85.030 167 17 7 525 691 388870816 388870974 2.780000e-36 163.0
34 TraesCS2B01G531900 chr6D 77.640 322 43 18 426 730 409833589 409833898 5.980000e-38 169.0
35 TraesCS2B01G531900 chr6A 93.519 108 7 0 7 114 234104257 234104150 1.000000e-35 161.0
36 TraesCS2B01G531900 chr6A 92.727 110 7 1 7 115 235486229 235486120 1.290000e-34 158.0
37 TraesCS2B01G531900 chr5A 92.727 110 7 1 7 115 584872662 584872553 1.290000e-34 158.0
38 TraesCS2B01G531900 chr5A 81.675 191 28 5 537 727 14224308 14224491 6.020000e-33 152.0
39 TraesCS2B01G531900 chr4A 91.964 112 8 1 4 115 153731126 153731016 4.660000e-34 156.0
40 TraesCS2B01G531900 chr3A 90.517 116 10 1 1 116 83290430 83290544 6.020000e-33 152.0
41 TraesCS2B01G531900 chr5B 76.538 260 46 12 3193 3443 682819895 682819642 1.020000e-25 128.0
42 TraesCS2B01G531900 chr3D 78.862 123 22 4 3323 3443 19037865 19037745 2.880000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G531900 chr2B 727241324 727244808 3484 True 6436.000000 6436 100.000000 1 3485 1 chr2B.!!$R1 3484
1 TraesCS2B01G531900 chr2B 727314033 727317647 3614 True 915.333333 2097 89.698667 886 3371 3 chr2B.!!$R3 2485
2 TraesCS2B01G531900 chr2B 727653162 727653722 560 False 289.000000 289 76.357000 2912 3472 1 chr2B.!!$F2 560
3 TraesCS2B01G531900 chr2A 732987797 732990151 2354 True 1704.000000 2281 93.723000 887 3485 2 chr2A.!!$R1 2598
4 TraesCS2B01G531900 chr2A 733039917 733040447 530 False 289.000000 289 76.895000 2942 3472 1 chr2A.!!$F1 530
5 TraesCS2B01G531900 chr2A 732995539 732996259 720 True 278.000000 448 86.993000 195 853 2 chr2A.!!$R2 658
6 TraesCS2B01G531900 chr2D 598732917 598735171 2254 True 1543.500000 1988 92.980000 1015 3485 2 chr2D.!!$R1 2470
7 TraesCS2B01G531900 chr2D 598745747 598746307 560 False 289.000000 289 76.481000 2912 3472 1 chr2D.!!$F1 560

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
185 186 0.033503 AGGGGGCTTTTATTCACGGG 60.034 55.0 0.0 0.0 0.0 5.28 F
843 941 0.170339 GCGGCTATGGTTCCAACAAC 59.830 55.0 0.0 0.0 0.0 3.32 F
1865 1993 0.902531 ATCCCTTACACCACACTCGG 59.097 55.0 0.0 0.0 0.0 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1865 1993 0.521659 CTCGTCTCGCGGTTCTTCTC 60.522 60.0 6.13 0.0 41.72 2.87 R
1885 2013 2.291996 TGTCTAGCCAAGCCCAGTAGTA 60.292 50.0 0.00 0.0 0.00 1.82 R
3184 4689 0.111061 TGCTGTTTGAGATGCTGGGT 59.889 50.0 0.00 0.0 0.00 4.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.366469 ATCTGTTCCTGCCGTGTCT 58.634 52.632 0.00 0.00 0.00 3.41
19 20 0.687354 ATCTGTTCCTGCCGTGTCTT 59.313 50.000 0.00 0.00 0.00 3.01
20 21 1.334160 TCTGTTCCTGCCGTGTCTTA 58.666 50.000 0.00 0.00 0.00 2.10
21 22 1.899814 TCTGTTCCTGCCGTGTCTTAT 59.100 47.619 0.00 0.00 0.00 1.73
22 23 3.093814 TCTGTTCCTGCCGTGTCTTATA 58.906 45.455 0.00 0.00 0.00 0.98
23 24 3.119245 TCTGTTCCTGCCGTGTCTTATAC 60.119 47.826 0.00 0.00 0.00 1.47
24 25 2.829720 TGTTCCTGCCGTGTCTTATACT 59.170 45.455 0.00 0.00 0.00 2.12
25 26 3.119245 TGTTCCTGCCGTGTCTTATACTC 60.119 47.826 0.00 0.00 0.00 2.59
26 27 2.029623 TCCTGCCGTGTCTTATACTCC 58.970 52.381 0.00 0.00 0.00 3.85
27 28 1.754803 CCTGCCGTGTCTTATACTCCA 59.245 52.381 0.00 0.00 0.00 3.86
28 29 2.167693 CCTGCCGTGTCTTATACTCCAA 59.832 50.000 0.00 0.00 0.00 3.53
29 30 3.369052 CCTGCCGTGTCTTATACTCCAAA 60.369 47.826 0.00 0.00 0.00 3.28
30 31 3.592059 TGCCGTGTCTTATACTCCAAAC 58.408 45.455 0.00 0.00 0.00 2.93
31 32 3.259876 TGCCGTGTCTTATACTCCAAACT 59.740 43.478 0.00 0.00 0.00 2.66
32 33 3.617263 GCCGTGTCTTATACTCCAAACTG 59.383 47.826 0.00 0.00 0.00 3.16
33 34 4.181578 CCGTGTCTTATACTCCAAACTGG 58.818 47.826 0.00 0.00 39.43 4.00
34 35 4.322499 CCGTGTCTTATACTCCAAACTGGT 60.322 45.833 0.00 0.00 39.03 4.00
35 36 4.863131 CGTGTCTTATACTCCAAACTGGTC 59.137 45.833 0.00 0.00 39.03 4.02
36 37 5.566032 CGTGTCTTATACTCCAAACTGGTCA 60.566 44.000 0.00 0.00 39.03 4.02
37 38 6.407202 GTGTCTTATACTCCAAACTGGTCAT 58.593 40.000 0.00 0.00 39.03 3.06
38 39 6.879458 GTGTCTTATACTCCAAACTGGTCATT 59.121 38.462 0.00 0.00 39.03 2.57
39 40 6.878923 TGTCTTATACTCCAAACTGGTCATTG 59.121 38.462 0.00 0.00 39.03 2.82
40 41 6.879458 GTCTTATACTCCAAACTGGTCATTGT 59.121 38.462 0.00 0.00 39.03 2.71
41 42 8.038944 GTCTTATACTCCAAACTGGTCATTGTA 58.961 37.037 0.00 0.00 39.03 2.41
42 43 8.038944 TCTTATACTCCAAACTGGTCATTGTAC 58.961 37.037 0.00 0.00 39.03 2.90
43 44 4.706842 ACTCCAAACTGGTCATTGTACT 57.293 40.909 0.00 0.00 39.03 2.73
44 45 4.642429 ACTCCAAACTGGTCATTGTACTC 58.358 43.478 0.00 0.00 39.03 2.59
45 46 4.003648 CTCCAAACTGGTCATTGTACTCC 58.996 47.826 0.00 0.00 39.03 3.85
46 47 3.081804 CCAAACTGGTCATTGTACTCCC 58.918 50.000 0.00 0.00 31.35 4.30
47 48 3.497763 CCAAACTGGTCATTGTACTCCCA 60.498 47.826 0.00 0.00 31.35 4.37
48 49 4.335416 CAAACTGGTCATTGTACTCCCAT 58.665 43.478 0.00 0.00 0.00 4.00
49 50 5.496556 CAAACTGGTCATTGTACTCCCATA 58.503 41.667 0.00 0.00 0.00 2.74
50 51 5.975988 AACTGGTCATTGTACTCCCATAT 57.024 39.130 0.00 0.00 0.00 1.78
51 52 7.279615 CAAACTGGTCATTGTACTCCCATATA 58.720 38.462 0.00 0.00 0.00 0.86
52 53 7.633018 AACTGGTCATTGTACTCCCATATAT 57.367 36.000 0.00 0.00 0.00 0.86
53 54 8.736097 AACTGGTCATTGTACTCCCATATATA 57.264 34.615 0.00 0.00 0.00 0.86
54 55 8.917414 ACTGGTCATTGTACTCCCATATATAT 57.083 34.615 0.00 0.00 0.00 0.86
55 56 8.762645 ACTGGTCATTGTACTCCCATATATATG 58.237 37.037 14.78 14.78 0.00 1.78
56 57 7.564793 TGGTCATTGTACTCCCATATATATGC 58.435 38.462 16.08 3.55 32.40 3.14
57 58 6.992715 GGTCATTGTACTCCCATATATATGCC 59.007 42.308 16.08 4.72 32.40 4.40
58 59 6.992715 GTCATTGTACTCCCATATATATGCCC 59.007 42.308 16.08 2.16 32.40 5.36
59 60 6.676189 TCATTGTACTCCCATATATATGCCCA 59.324 38.462 16.08 2.58 32.40 5.36
60 61 5.950544 TGTACTCCCATATATATGCCCAC 57.049 43.478 16.08 9.61 32.40 4.61
61 62 4.404394 TGTACTCCCATATATATGCCCACG 59.596 45.833 16.08 3.58 32.40 4.94
62 63 3.719871 ACTCCCATATATATGCCCACGA 58.280 45.455 16.08 6.05 32.40 4.35
63 64 3.706594 ACTCCCATATATATGCCCACGAG 59.293 47.826 16.08 14.91 32.40 4.18
64 65 3.038280 TCCCATATATATGCCCACGAGG 58.962 50.000 16.08 10.43 39.47 4.63
73 74 2.032528 CCCACGAGGCTCAAGCAA 59.967 61.111 15.95 0.00 44.36 3.91
74 75 1.377725 CCCACGAGGCTCAAGCAAT 60.378 57.895 15.95 0.00 44.36 3.56
75 76 0.107703 CCCACGAGGCTCAAGCAATA 60.108 55.000 15.95 0.00 44.36 1.90
76 77 1.009829 CCACGAGGCTCAAGCAATAC 58.990 55.000 15.95 0.00 44.36 1.89
77 78 1.675714 CCACGAGGCTCAAGCAATACA 60.676 52.381 15.95 0.00 44.36 2.29
78 79 2.076100 CACGAGGCTCAAGCAATACAA 58.924 47.619 15.95 0.00 44.36 2.41
79 80 2.076863 ACGAGGCTCAAGCAATACAAC 58.923 47.619 15.95 0.00 44.36 3.32
80 81 2.076100 CGAGGCTCAAGCAATACAACA 58.924 47.619 15.95 0.00 44.36 3.33
81 82 2.483877 CGAGGCTCAAGCAATACAACAA 59.516 45.455 15.95 0.00 44.36 2.83
82 83 3.667960 CGAGGCTCAAGCAATACAACAAC 60.668 47.826 15.95 0.00 44.36 3.32
83 84 3.490348 AGGCTCAAGCAATACAACAACT 58.510 40.909 4.13 0.00 44.36 3.16
84 85 4.651778 AGGCTCAAGCAATACAACAACTA 58.348 39.130 4.13 0.00 44.36 2.24
85 86 5.256474 AGGCTCAAGCAATACAACAACTAT 58.744 37.500 4.13 0.00 44.36 2.12
86 87 5.711976 AGGCTCAAGCAATACAACAACTATT 59.288 36.000 4.13 0.00 44.36 1.73
87 88 6.030228 GGCTCAAGCAATACAACAACTATTC 58.970 40.000 4.13 0.00 44.36 1.75
88 89 6.030228 GCTCAAGCAATACAACAACTATTCC 58.970 40.000 0.00 0.00 41.59 3.01
89 90 6.349280 GCTCAAGCAATACAACAACTATTCCA 60.349 38.462 0.00 0.00 41.59 3.53
90 91 7.629222 GCTCAAGCAATACAACAACTATTCCAT 60.629 37.037 0.00 0.00 41.59 3.41
91 92 7.761409 TCAAGCAATACAACAACTATTCCATC 58.239 34.615 0.00 0.00 0.00 3.51
92 93 7.392953 TCAAGCAATACAACAACTATTCCATCA 59.607 33.333 0.00 0.00 0.00 3.07
93 94 7.701539 AGCAATACAACAACTATTCCATCAA 57.298 32.000 0.00 0.00 0.00 2.57
94 95 8.121305 AGCAATACAACAACTATTCCATCAAA 57.879 30.769 0.00 0.00 0.00 2.69
95 96 8.028938 AGCAATACAACAACTATTCCATCAAAC 58.971 33.333 0.00 0.00 0.00 2.93
96 97 7.275560 GCAATACAACAACTATTCCATCAAACC 59.724 37.037 0.00 0.00 0.00 3.27
97 98 5.722021 ACAACAACTATTCCATCAAACCC 57.278 39.130 0.00 0.00 0.00 4.11
98 99 4.526650 ACAACAACTATTCCATCAAACCCC 59.473 41.667 0.00 0.00 0.00 4.95
99 100 4.675063 ACAACTATTCCATCAAACCCCT 57.325 40.909 0.00 0.00 0.00 4.79
100 101 4.600062 ACAACTATTCCATCAAACCCCTC 58.400 43.478 0.00 0.00 0.00 4.30
101 102 4.292306 ACAACTATTCCATCAAACCCCTCT 59.708 41.667 0.00 0.00 0.00 3.69
102 103 4.779993 ACTATTCCATCAAACCCCTCTC 57.220 45.455 0.00 0.00 0.00 3.20
103 104 4.375313 ACTATTCCATCAAACCCCTCTCT 58.625 43.478 0.00 0.00 0.00 3.10
104 105 3.941704 ATTCCATCAAACCCCTCTCTC 57.058 47.619 0.00 0.00 0.00 3.20
105 106 1.584724 TCCATCAAACCCCTCTCTCC 58.415 55.000 0.00 0.00 0.00 3.71
106 107 0.548510 CCATCAAACCCCTCTCTCCC 59.451 60.000 0.00 0.00 0.00 4.30
107 108 1.589414 CATCAAACCCCTCTCTCCCT 58.411 55.000 0.00 0.00 0.00 4.20
108 109 1.918957 CATCAAACCCCTCTCTCCCTT 59.081 52.381 0.00 0.00 0.00 3.95
109 110 1.657804 TCAAACCCCTCTCTCCCTTC 58.342 55.000 0.00 0.00 0.00 3.46
110 111 1.152271 TCAAACCCCTCTCTCCCTTCT 59.848 52.381 0.00 0.00 0.00 2.85
111 112 2.385765 TCAAACCCCTCTCTCCCTTCTA 59.614 50.000 0.00 0.00 0.00 2.10
112 113 3.181399 TCAAACCCCTCTCTCCCTTCTAA 60.181 47.826 0.00 0.00 0.00 2.10
113 114 2.553911 ACCCCTCTCTCCCTTCTAAC 57.446 55.000 0.00 0.00 0.00 2.34
114 115 1.722851 ACCCCTCTCTCCCTTCTAACA 59.277 52.381 0.00 0.00 0.00 2.41
115 116 2.292587 ACCCCTCTCTCCCTTCTAACAG 60.293 54.545 0.00 0.00 0.00 3.16
116 117 1.760029 CCCTCTCTCCCTTCTAACAGC 59.240 57.143 0.00 0.00 0.00 4.40
117 118 1.407258 CCTCTCTCCCTTCTAACAGCG 59.593 57.143 0.00 0.00 0.00 5.18
118 119 2.370349 CTCTCTCCCTTCTAACAGCGA 58.630 52.381 0.00 0.00 0.00 4.93
119 120 2.093106 TCTCTCCCTTCTAACAGCGAC 58.907 52.381 0.00 0.00 0.00 5.19
120 121 1.819288 CTCTCCCTTCTAACAGCGACA 59.181 52.381 0.00 0.00 0.00 4.35
121 122 2.428890 CTCTCCCTTCTAACAGCGACAT 59.571 50.000 0.00 0.00 0.00 3.06
122 123 2.832129 TCTCCCTTCTAACAGCGACATT 59.168 45.455 0.00 0.00 0.00 2.71
123 124 3.119101 TCTCCCTTCTAACAGCGACATTC 60.119 47.826 0.00 0.00 0.00 2.67
124 125 2.565391 TCCCTTCTAACAGCGACATTCA 59.435 45.455 0.00 0.00 0.00 2.57
125 126 3.007506 TCCCTTCTAACAGCGACATTCAA 59.992 43.478 0.00 0.00 0.00 2.69
126 127 3.941483 CCCTTCTAACAGCGACATTCAAT 59.059 43.478 0.00 0.00 0.00 2.57
127 128 5.105106 TCCCTTCTAACAGCGACATTCAATA 60.105 40.000 0.00 0.00 0.00 1.90
128 129 5.235186 CCCTTCTAACAGCGACATTCAATAG 59.765 44.000 0.00 0.00 0.00 1.73
129 130 5.812642 CCTTCTAACAGCGACATTCAATAGT 59.187 40.000 0.00 0.00 0.00 2.12
130 131 6.313905 CCTTCTAACAGCGACATTCAATAGTT 59.686 38.462 0.00 0.00 0.00 2.24
131 132 7.491372 CCTTCTAACAGCGACATTCAATAGTTA 59.509 37.037 0.00 0.00 0.00 2.24
132 133 8.766000 TTCTAACAGCGACATTCAATAGTTAA 57.234 30.769 0.00 0.00 0.00 2.01
133 134 8.181487 TCTAACAGCGACATTCAATAGTTAAC 57.819 34.615 0.00 0.00 0.00 2.01
134 135 5.796350 ACAGCGACATTCAATAGTTAACC 57.204 39.130 0.88 0.00 0.00 2.85
135 136 5.242434 ACAGCGACATTCAATAGTTAACCA 58.758 37.500 0.88 0.00 0.00 3.67
136 137 5.121768 ACAGCGACATTCAATAGTTAACCAC 59.878 40.000 0.88 0.00 0.00 4.16
137 138 4.328983 AGCGACATTCAATAGTTAACCACG 59.671 41.667 0.88 0.00 0.00 4.94
138 139 4.493545 GCGACATTCAATAGTTAACCACGG 60.494 45.833 0.88 0.00 0.00 4.94
139 140 4.493545 CGACATTCAATAGTTAACCACGGC 60.494 45.833 0.88 0.00 0.00 5.68
140 141 3.692593 ACATTCAATAGTTAACCACGGCC 59.307 43.478 0.88 0.00 0.00 6.13
141 142 3.420300 TTCAATAGTTAACCACGGCCA 57.580 42.857 2.24 0.00 0.00 5.36
142 143 2.702261 TCAATAGTTAACCACGGCCAC 58.298 47.619 2.24 0.00 0.00 5.01
144 145 0.108041 ATAGTTAACCACGGCCACGG 60.108 55.000 2.24 4.36 46.48 4.94
145 146 2.169937 TAGTTAACCACGGCCACGGG 62.170 60.000 11.98 7.53 46.48 5.28
146 147 3.558276 TTAACCACGGCCACGGGT 61.558 61.111 11.98 7.79 43.48 5.28
147 148 2.212811 TTAACCACGGCCACGGGTA 61.213 57.895 11.98 6.74 43.48 3.69
148 149 1.762522 TTAACCACGGCCACGGGTAA 61.763 55.000 12.86 12.86 43.48 2.85
149 150 1.551908 TAACCACGGCCACGGGTAAT 61.552 55.000 11.98 0.38 43.48 1.89
150 151 2.822255 CCACGGCCACGGGTAATG 60.822 66.667 2.24 0.00 43.48 1.90
151 152 2.266372 CACGGCCACGGGTAATGA 59.734 61.111 2.24 0.00 46.48 2.57
152 153 1.153249 CACGGCCACGGGTAATGAT 60.153 57.895 2.24 0.00 46.48 2.45
153 154 0.746563 CACGGCCACGGGTAATGATT 60.747 55.000 2.24 0.00 46.48 2.57
154 155 0.463116 ACGGCCACGGGTAATGATTC 60.463 55.000 2.24 0.00 46.48 2.52
155 156 0.179056 CGGCCACGGGTAATGATTCT 60.179 55.000 2.24 0.00 36.18 2.40
156 157 1.745827 CGGCCACGGGTAATGATTCTT 60.746 52.381 2.24 0.00 36.18 2.52
157 158 2.375146 GGCCACGGGTAATGATTCTTT 58.625 47.619 0.00 0.00 0.00 2.52
158 159 2.758423 GGCCACGGGTAATGATTCTTTT 59.242 45.455 0.00 0.00 0.00 2.27
159 160 3.194755 GGCCACGGGTAATGATTCTTTTT 59.805 43.478 0.00 0.00 0.00 1.94
181 182 7.560796 TTTTGATAAAGGGGGCTTTTATTCA 57.439 32.000 0.00 0.00 32.42 2.57
182 183 6.538945 TTGATAAAGGGGGCTTTTATTCAC 57.461 37.500 0.00 0.00 32.42 3.18
183 184 4.642885 TGATAAAGGGGGCTTTTATTCACG 59.357 41.667 0.00 0.00 32.42 4.35
184 185 1.847328 AAGGGGGCTTTTATTCACGG 58.153 50.000 0.00 0.00 0.00 4.94
185 186 0.033503 AGGGGGCTTTTATTCACGGG 60.034 55.000 0.00 0.00 0.00 5.28
186 187 0.323999 GGGGGCTTTTATTCACGGGT 60.324 55.000 0.00 0.00 0.00 5.28
187 188 1.064537 GGGGGCTTTTATTCACGGGTA 60.065 52.381 0.00 0.00 0.00 3.69
188 189 2.621147 GGGGGCTTTTATTCACGGGTAA 60.621 50.000 0.00 0.00 0.00 2.85
189 190 3.293337 GGGGCTTTTATTCACGGGTAAT 58.707 45.455 0.00 0.00 0.00 1.89
190 191 3.067601 GGGGCTTTTATTCACGGGTAATG 59.932 47.826 0.00 0.00 0.00 1.90
191 192 3.949113 GGGCTTTTATTCACGGGTAATGA 59.051 43.478 0.00 0.00 0.00 2.57
192 193 4.583073 GGGCTTTTATTCACGGGTAATGAT 59.417 41.667 0.00 0.00 0.00 2.45
193 194 5.068591 GGGCTTTTATTCACGGGTAATGATT 59.931 40.000 0.00 0.00 0.00 2.57
194 195 6.206498 GGCTTTTATTCACGGGTAATGATTC 58.794 40.000 0.00 0.00 0.00 2.52
195 196 6.039382 GGCTTTTATTCACGGGTAATGATTCT 59.961 38.462 0.00 0.00 0.00 2.40
196 197 7.227910 GGCTTTTATTCACGGGTAATGATTCTA 59.772 37.037 0.00 0.00 0.00 2.10
197 198 8.068380 GCTTTTATTCACGGGTAATGATTCTAC 58.932 37.037 0.00 0.00 0.00 2.59
198 199 9.104965 CTTTTATTCACGGGTAATGATTCTACA 57.895 33.333 0.00 0.00 0.00 2.74
230 231 3.463944 CGGTTGGTGAGTTTAGTGTTCT 58.536 45.455 0.00 0.00 0.00 3.01
242 243 6.415573 AGTTTAGTGTTCTGACTGGTCTTTT 58.584 36.000 2.38 0.00 0.00 2.27
291 293 5.164620 TGAGATGCACAAAGGATCACTTA 57.835 39.130 0.00 0.00 46.54 2.24
300 302 4.223923 ACAAAGGATCACTTACTCCCTCTG 59.776 45.833 0.00 0.00 38.85 3.35
311 313 8.180165 TCACTTACTCCCTCTGATCCATATTAT 58.820 37.037 0.00 0.00 0.00 1.28
313 315 8.820831 ACTTACTCCCTCTGATCCATATTATTG 58.179 37.037 0.00 0.00 0.00 1.90
314 316 8.742125 TTACTCCCTCTGATCCATATTATTGT 57.258 34.615 0.00 0.00 0.00 2.71
315 317 7.251321 ACTCCCTCTGATCCATATTATTGTC 57.749 40.000 0.00 0.00 0.00 3.18
316 318 6.789457 ACTCCCTCTGATCCATATTATTGTCA 59.211 38.462 0.00 0.00 0.00 3.58
317 319 7.009179 TCCCTCTGATCCATATTATTGTCAC 57.991 40.000 0.00 0.00 0.00 3.67
318 320 6.013379 TCCCTCTGATCCATATTATTGTCACC 60.013 42.308 0.00 0.00 0.00 4.02
333 336 5.766150 TTGTCACCGATGAACATTTTCTT 57.234 34.783 0.00 0.00 36.31 2.52
336 339 5.298026 TGTCACCGATGAACATTTTCTTGAA 59.702 36.000 0.00 0.00 36.31 2.69
403 409 5.748402 TGTAGTACGTTATTCTCTCCCTGA 58.252 41.667 0.00 0.00 0.00 3.86
429 435 2.649331 AAGTGACTCGTATTGGGACG 57.351 50.000 0.00 0.00 44.29 4.79
443 449 0.386113 GGGACGTGGAGTATCTGAGC 59.614 60.000 0.00 0.00 33.73 4.26
466 474 1.884464 GCTCATGAGCGCGGATGAA 60.884 57.895 30.64 8.78 45.29 2.57
469 477 0.390998 TCATGAGCGCGGATGAACAA 60.391 50.000 18.50 0.54 0.00 2.83
471 479 1.866601 CATGAGCGCGGATGAACAATA 59.133 47.619 8.83 0.00 0.00 1.90
475 483 3.189495 TGAGCGCGGATGAACAATAAAAA 59.811 39.130 8.83 0.00 0.00 1.94
476 484 4.142491 TGAGCGCGGATGAACAATAAAAAT 60.142 37.500 8.83 0.00 0.00 1.82
477 485 4.351192 AGCGCGGATGAACAATAAAAATC 58.649 39.130 8.83 0.00 0.00 2.17
478 486 3.177643 GCGCGGATGAACAATAAAAATCG 59.822 43.478 8.83 0.00 0.00 3.34
481 489 5.169561 CGCGGATGAACAATAAAAATCGAAG 59.830 40.000 0.00 0.00 0.00 3.79
483 491 6.745450 GCGGATGAACAATAAAAATCGAAGAA 59.255 34.615 0.00 0.00 43.58 2.52
484 492 7.272515 GCGGATGAACAATAAAAATCGAAGAAA 59.727 33.333 0.00 0.00 43.58 2.52
485 493 9.123709 CGGATGAACAATAAAAATCGAAGAAAA 57.876 29.630 0.00 0.00 43.58 2.29
556 573 7.441760 TGACAAGTGCTTGCAAATTTTCATTAT 59.558 29.630 11.43 0.00 44.03 1.28
561 578 8.038944 AGTGCTTGCAAATTTTCATTATGAGAT 58.961 29.630 0.00 0.00 0.00 2.75
576 600 3.251479 TGAGATCACATTCGTGGAAGG 57.749 47.619 0.00 0.00 43.79 3.46
577 601 2.567169 TGAGATCACATTCGTGGAAGGT 59.433 45.455 0.00 0.00 43.79 3.50
584 608 2.224523 ACATTCGTGGAAGGTGTGACAT 60.225 45.455 0.00 0.00 35.23 3.06
585 609 2.163818 TTCGTGGAAGGTGTGACATC 57.836 50.000 0.00 0.00 0.00 3.06
595 619 6.048509 GGAAGGTGTGACATCAAAACAAAAT 58.951 36.000 0.00 0.00 0.00 1.82
606 630 4.305769 TCAAAACAAAATTGATGCTCCGG 58.694 39.130 0.00 0.00 32.10 5.14
618 642 2.489938 TGCTCCGGAAATGCTACTTT 57.510 45.000 14.53 0.00 0.00 2.66
621 645 2.888594 CTCCGGAAATGCTACTTTCGA 58.111 47.619 5.23 0.00 36.24 3.71
625 649 3.417185 CGGAAATGCTACTTTCGAAAGC 58.583 45.455 32.49 22.60 39.63 3.51
636 660 3.068024 ACTTTCGAAAGCATTTTGGAGCA 59.932 39.130 32.49 0.00 39.27 4.26
645 669 4.312443 AGCATTTTGGAGCACTGATTTTG 58.688 39.130 0.00 0.00 0.00 2.44
649 673 6.458615 GCATTTTGGAGCACTGATTTTGTTTT 60.459 34.615 0.00 0.00 0.00 2.43
651 675 6.660887 TTTGGAGCACTGATTTTGTTTTTC 57.339 33.333 0.00 0.00 0.00 2.29
652 676 5.596836 TGGAGCACTGATTTTGTTTTTCT 57.403 34.783 0.00 0.00 0.00 2.52
653 677 5.591099 TGGAGCACTGATTTTGTTTTTCTC 58.409 37.500 0.00 0.00 0.00 2.87
654 678 5.360714 TGGAGCACTGATTTTGTTTTTCTCT 59.639 36.000 0.00 0.00 0.00 3.10
655 679 6.545666 TGGAGCACTGATTTTGTTTTTCTCTA 59.454 34.615 0.00 0.00 0.00 2.43
656 680 6.858478 GGAGCACTGATTTTGTTTTTCTCTAC 59.142 38.462 0.00 0.00 0.00 2.59
657 681 6.739112 AGCACTGATTTTGTTTTTCTCTACC 58.261 36.000 0.00 0.00 0.00 3.18
661 685 6.067263 TGATTTTGTTTTTCTCTACCCACG 57.933 37.500 0.00 0.00 0.00 4.94
664 688 2.762745 TGTTTTTCTCTACCCACGCTC 58.237 47.619 0.00 0.00 0.00 5.03
670 694 0.965866 CTCTACCCACGCTCTCCACA 60.966 60.000 0.00 0.00 0.00 4.17
681 705 4.447054 CACGCTCTCCACAAATATGATCTC 59.553 45.833 0.00 0.00 0.00 2.75
718 742 4.870221 ACCAACACTTAGAACGTTTGTC 57.130 40.909 0.46 0.00 0.00 3.18
721 745 5.163794 ACCAACACTTAGAACGTTTGTCAAG 60.164 40.000 0.46 6.43 0.00 3.02
726 750 6.594937 ACACTTAGAACGTTTGTCAAGGTTTA 59.405 34.615 0.46 0.57 40.33 2.01
727 751 7.281549 ACACTTAGAACGTTTGTCAAGGTTTAT 59.718 33.333 0.46 2.47 40.33 1.40
728 752 7.797123 CACTTAGAACGTTTGTCAAGGTTTATC 59.203 37.037 0.46 0.00 40.33 1.75
729 753 7.496591 ACTTAGAACGTTTGTCAAGGTTTATCA 59.503 33.333 0.46 0.00 40.33 2.15
730 754 6.877611 AGAACGTTTGTCAAGGTTTATCAT 57.122 33.333 0.46 0.00 40.33 2.45
731 755 7.972832 AGAACGTTTGTCAAGGTTTATCATA 57.027 32.000 0.46 0.00 40.33 2.15
733 757 8.287503 AGAACGTTTGTCAAGGTTTATCATAAC 58.712 33.333 0.46 0.00 40.33 1.89
734 758 6.905578 ACGTTTGTCAAGGTTTATCATAACC 58.094 36.000 0.00 0.00 46.45 2.85
745 769 7.992180 GGTTTATCATAACCAAGCTCATTTG 57.008 36.000 0.00 0.00 45.59 2.32
746 770 6.476706 GGTTTATCATAACCAAGCTCATTTGC 59.523 38.462 0.00 0.00 45.59 3.68
747 771 3.763097 TCATAACCAAGCTCATTTGCG 57.237 42.857 0.00 0.00 38.13 4.85
748 772 2.159393 TCATAACCAAGCTCATTTGCGC 60.159 45.455 0.00 0.00 38.13 6.09
749 773 1.533625 TAACCAAGCTCATTTGCGCT 58.466 45.000 9.73 0.00 37.77 5.92
750 774 0.242017 AACCAAGCTCATTTGCGCTC 59.758 50.000 9.73 0.00 34.65 5.03
751 775 1.138247 CCAAGCTCATTTGCGCTCC 59.862 57.895 9.73 0.00 34.65 4.70
752 776 1.588824 CCAAGCTCATTTGCGCTCCA 61.589 55.000 9.73 0.00 34.65 3.86
753 777 0.179171 CAAGCTCATTTGCGCTCCAG 60.179 55.000 9.73 0.00 34.65 3.86
754 778 1.930908 AAGCTCATTTGCGCTCCAGC 61.931 55.000 9.73 9.06 34.65 4.85
756 780 1.720301 CTCATTTGCGCTCCAGCTC 59.280 57.895 9.73 0.00 39.32 4.09
757 781 1.003476 TCATTTGCGCTCCAGCTCA 60.003 52.632 9.73 0.00 39.32 4.26
758 782 1.022982 TCATTTGCGCTCCAGCTCAG 61.023 55.000 9.73 0.00 37.07 3.35
759 783 1.022982 CATTTGCGCTCCAGCTCAGA 61.023 55.000 9.73 0.00 37.07 3.27
761 785 0.952497 TTTGCGCTCCAGCTCAGAAG 60.952 55.000 9.73 0.00 37.07 2.85
774 830 3.005897 AGCTCAGAAGTTACTTTCGCTCA 59.994 43.478 0.00 0.00 32.33 4.26
775 831 3.122111 GCTCAGAAGTTACTTTCGCTCAC 59.878 47.826 0.00 0.00 32.33 3.51
831 929 3.889692 CCACCCCATGGCGGCTAT 61.890 66.667 16.72 0.00 43.24 2.97
843 941 0.170339 GCGGCTATGGTTCCAACAAC 59.830 55.000 0.00 0.00 0.00 3.32
846 944 3.541632 CGGCTATGGTTCCAACAACTAT 58.458 45.455 0.00 0.00 0.00 2.12
847 945 4.699637 CGGCTATGGTTCCAACAACTATA 58.300 43.478 0.00 0.00 0.00 1.31
849 947 5.763204 CGGCTATGGTTCCAACAACTATAAT 59.237 40.000 0.00 0.00 0.00 1.28
852 950 9.127277 GGCTATGGTTCCAACAACTATAATTTA 57.873 33.333 0.00 0.00 0.00 1.40
857 955 9.914834 TGGTTCCAACAACTATAATTTATAGCT 57.085 29.630 19.06 8.08 41.43 3.32
872 970 6.639632 TTTATAGCTCCATTTGATCAAGGC 57.360 37.500 8.41 9.20 0.00 4.35
873 971 2.519771 AGCTCCATTTGATCAAGGCA 57.480 45.000 8.41 0.00 0.00 4.75
874 972 2.811410 AGCTCCATTTGATCAAGGCAA 58.189 42.857 8.41 0.00 0.00 4.52
875 973 3.371965 AGCTCCATTTGATCAAGGCAAT 58.628 40.909 8.41 0.00 0.00 3.56
876 974 3.773119 AGCTCCATTTGATCAAGGCAATT 59.227 39.130 8.41 0.00 0.00 2.32
877 975 4.957954 AGCTCCATTTGATCAAGGCAATTA 59.042 37.500 8.41 0.00 0.00 1.40
878 976 5.601313 AGCTCCATTTGATCAAGGCAATTAT 59.399 36.000 8.41 0.00 0.00 1.28
879 977 6.099269 AGCTCCATTTGATCAAGGCAATTATT 59.901 34.615 8.41 0.00 0.00 1.40
880 978 6.202188 GCTCCATTTGATCAAGGCAATTATTG 59.798 38.462 8.41 0.00 0.00 1.90
881 979 7.421087 TCCATTTGATCAAGGCAATTATTGA 57.579 32.000 9.36 0.00 39.59 2.57
882 980 8.025270 TCCATTTGATCAAGGCAATTATTGAT 57.975 30.769 9.36 10.76 46.21 2.57
883 981 7.929245 TCCATTTGATCAAGGCAATTATTGATG 59.071 33.333 9.36 5.00 44.18 3.07
884 982 7.929245 CCATTTGATCAAGGCAATTATTGATGA 59.071 33.333 9.36 9.53 44.18 2.92
1001 1121 6.887002 GGGATAGTGAGGAAAACAAAAGAGAT 59.113 38.462 0.00 0.00 0.00 2.75
1007 1127 2.029918 GGAAAACAAAAGAGATGCGCCT 60.030 45.455 4.18 0.00 0.00 5.52
1254 1374 2.502492 CGTCATCCCCTCGGAGCAT 61.502 63.158 0.00 0.00 43.12 3.79
1342 1462 3.531283 TCCTCGAGGAGATGCTGC 58.469 61.111 30.49 0.00 39.78 5.25
1343 1463 1.380380 TCCTCGAGGAGATGCTGCA 60.380 57.895 30.49 4.13 39.78 4.41
1545 1665 1.005748 TGAGAGCGCCAACTCACAG 60.006 57.895 20.20 0.00 39.26 3.66
1547 1668 2.358003 GAGCGCCAACTCACAGCT 60.358 61.111 2.29 0.00 41.29 4.24
1592 1713 6.645827 AGTGATGAAGATCTATTTCTGATGCG 59.354 38.462 0.00 0.00 0.00 4.73
1594 1715 6.423001 TGATGAAGATCTATTTCTGATGCGTG 59.577 38.462 0.00 0.00 0.00 5.34
1595 1716 5.906073 TGAAGATCTATTTCTGATGCGTGA 58.094 37.500 0.00 0.00 0.00 4.35
1596 1717 6.519382 TGAAGATCTATTTCTGATGCGTGAT 58.481 36.000 0.00 0.00 0.00 3.06
1597 1718 6.423001 TGAAGATCTATTTCTGATGCGTGATG 59.577 38.462 0.00 0.00 0.00 3.07
1598 1719 4.689812 AGATCTATTTCTGATGCGTGATGC 59.310 41.667 0.00 0.00 46.70 3.91
1613 1738 4.158394 GCGTGATGCATTTCCCCATTATAT 59.842 41.667 0.00 0.00 45.45 0.86
1650 1775 2.158842 GGATCAGTTCATCCCTGGTCAG 60.159 54.545 3.38 0.00 41.01 3.51
1662 1787 2.069273 CCTGGTCAGACTTGCTTAACG 58.931 52.381 0.00 0.00 0.00 3.18
1801 1926 2.181777 GCGTCATGGACTCGCTCA 59.818 61.111 14.40 0.00 45.29 4.26
1863 1991 1.003118 TGCATCCCTTACACCACACTC 59.997 52.381 0.00 0.00 0.00 3.51
1865 1993 0.902531 ATCCCTTACACCACACTCGG 59.097 55.000 0.00 0.00 0.00 4.63
1902 2033 2.385803 GAGTACTACTGGGCTTGGCTA 58.614 52.381 0.00 0.00 0.00 3.93
1908 2039 0.838122 ACTGGGCTTGGCTAGACACT 60.838 55.000 13.87 0.00 31.29 3.55
2325 2466 4.514577 ACGAGGGAGGCGATTGCG 62.515 66.667 0.00 0.00 44.10 4.85
2522 2772 4.198530 GTCCTGTGTACTAGTACTCCCTC 58.801 52.174 28.56 15.97 37.00 4.30
2527 2777 4.013050 GTGTACTAGTACTCCCTCCGTTT 58.987 47.826 28.56 0.00 37.00 3.60
2528 2778 4.095632 GTGTACTAGTACTCCCTCCGTTTC 59.904 50.000 28.56 3.45 37.00 2.78
2529 2779 2.732763 ACTAGTACTCCCTCCGTTTCC 58.267 52.381 0.00 0.00 0.00 3.13
2530 2780 2.311243 ACTAGTACTCCCTCCGTTTCCT 59.689 50.000 0.00 0.00 0.00 3.36
2531 2781 1.849977 AGTACTCCCTCCGTTTCCTC 58.150 55.000 0.00 0.00 0.00 3.71
2533 2783 1.897802 GTACTCCCTCCGTTTCCTCAA 59.102 52.381 0.00 0.00 0.00 3.02
2534 2784 1.657804 ACTCCCTCCGTTTCCTCAAT 58.342 50.000 0.00 0.00 0.00 2.57
2535 2785 2.829023 ACTCCCTCCGTTTCCTCAATA 58.171 47.619 0.00 0.00 0.00 1.90
2536 2786 3.385115 ACTCCCTCCGTTTCCTCAATAT 58.615 45.455 0.00 0.00 0.00 1.28
2537 2787 4.553678 ACTCCCTCCGTTTCCTCAATATA 58.446 43.478 0.00 0.00 0.00 0.86
2538 2788 4.966805 ACTCCCTCCGTTTCCTCAATATAA 59.033 41.667 0.00 0.00 0.00 0.98
2539 2789 5.070580 ACTCCCTCCGTTTCCTCAATATAAG 59.929 44.000 0.00 0.00 0.00 1.73
2540 2790 4.347000 TCCCTCCGTTTCCTCAATATAAGG 59.653 45.833 0.00 0.00 35.05 2.69
2542 2792 5.057149 CCTCCGTTTCCTCAATATAAGGTG 58.943 45.833 4.45 0.00 35.29 4.00
2543 2793 5.396436 CCTCCGTTTCCTCAATATAAGGTGT 60.396 44.000 4.45 0.00 35.29 4.16
2547 2797 8.926374 TCCGTTTCCTCAATATAAGGTGTATTA 58.074 33.333 4.45 0.00 35.29 0.98
2586 2836 4.439253 ACTTCTCTAAGTTTGGCCAAGT 57.561 40.909 19.48 10.75 43.60 3.16
2587 2837 4.793201 ACTTCTCTAAGTTTGGCCAAGTT 58.207 39.130 19.48 17.90 43.60 2.66
2588 2838 5.201243 ACTTCTCTAAGTTTGGCCAAGTTT 58.799 37.500 19.48 18.22 43.60 2.66
2589 2839 6.362248 ACTTCTCTAAGTTTGGCCAAGTTTA 58.638 36.000 19.48 18.35 43.60 2.01
2590 2840 7.004691 ACTTCTCTAAGTTTGGCCAAGTTTAT 58.995 34.615 19.48 7.36 43.60 1.40
2591 2841 8.161425 ACTTCTCTAAGTTTGGCCAAGTTTATA 58.839 33.333 19.48 12.24 43.60 0.98
2592 2842 8.561738 TTCTCTAAGTTTGGCCAAGTTTATAG 57.438 34.615 19.48 19.56 30.16 1.31
2593 2843 7.913789 TCTCTAAGTTTGGCCAAGTTTATAGA 58.086 34.615 19.48 21.15 30.16 1.98
2594 2844 7.822822 TCTCTAAGTTTGGCCAAGTTTATAGAC 59.177 37.037 19.48 11.34 30.16 2.59
2595 2845 7.455058 TCTAAGTTTGGCCAAGTTTATAGACA 58.545 34.615 19.48 0.00 30.16 3.41
2596 2846 6.969993 AAGTTTGGCCAAGTTTATAGACAA 57.030 33.333 19.48 0.00 0.00 3.18
2597 2847 6.969993 AGTTTGGCCAAGTTTATAGACAAA 57.030 33.333 19.48 0.00 0.00 2.83
2598 2848 7.354751 AGTTTGGCCAAGTTTATAGACAAAA 57.645 32.000 19.48 0.00 0.00 2.44
2599 2849 7.787028 AGTTTGGCCAAGTTTATAGACAAAAA 58.213 30.769 19.48 0.00 0.00 1.94
2600 2850 8.428852 AGTTTGGCCAAGTTTATAGACAAAAAT 58.571 29.630 19.48 0.00 0.00 1.82
2601 2851 9.699703 GTTTGGCCAAGTTTATAGACAAAAATA 57.300 29.630 19.48 0.00 0.00 1.40
2604 2854 9.249053 TGGCCAAGTTTATAGACAAAAATATCA 57.751 29.630 0.61 0.00 0.00 2.15
2715 2965 6.902224 ATTTTGCTGTAAAGTTGGTCAAAC 57.098 33.333 0.00 0.00 39.24 2.93
2716 2966 5.392767 TTTGCTGTAAAGTTGGTCAAACA 57.607 34.783 0.00 0.00 41.61 2.83
2717 2967 5.590530 TTGCTGTAAAGTTGGTCAAACAT 57.409 34.783 0.00 0.00 41.61 2.71
2718 2968 6.701145 TTGCTGTAAAGTTGGTCAAACATA 57.299 33.333 0.00 0.00 41.61 2.29
2719 2969 6.312399 TGCTGTAAAGTTGGTCAAACATAG 57.688 37.500 0.00 0.00 41.61 2.23
2720 2970 6.058833 TGCTGTAAAGTTGGTCAAACATAGA 58.941 36.000 0.00 0.00 41.61 1.98
2721 2971 6.017440 TGCTGTAAAGTTGGTCAAACATAGAC 60.017 38.462 0.00 0.00 41.61 2.59
2722 2972 6.017440 GCTGTAAAGTTGGTCAAACATAGACA 60.017 38.462 0.00 0.00 41.61 3.41
2723 2973 7.468084 GCTGTAAAGTTGGTCAAACATAGACAA 60.468 37.037 0.00 0.00 41.61 3.18
2724 2974 7.699566 TGTAAAGTTGGTCAAACATAGACAAC 58.300 34.615 0.00 0.00 41.61 3.32
2725 2975 6.767524 AAAGTTGGTCAAACATAGACAACA 57.232 33.333 0.00 0.00 41.61 3.33
2726 2976 6.377327 AAGTTGGTCAAACATAGACAACAG 57.623 37.500 0.00 0.00 41.61 3.16
2727 2977 5.437060 AGTTGGTCAAACATAGACAACAGT 58.563 37.500 0.00 0.00 41.61 3.55
2728 2978 5.885912 AGTTGGTCAAACATAGACAACAGTT 59.114 36.000 0.00 0.00 41.61 3.16
2729 2979 5.749596 TGGTCAAACATAGACAACAGTTG 57.250 39.130 12.03 12.03 37.74 3.16
2730 2980 5.432645 TGGTCAAACATAGACAACAGTTGA 58.567 37.500 20.56 0.00 37.74 3.18
2731 2981 5.295787 TGGTCAAACATAGACAACAGTTGAC 59.704 40.000 20.56 13.83 37.74 3.18
2732 2982 5.527582 GGTCAAACATAGACAACAGTTGACT 59.472 40.000 20.56 20.20 39.01 3.41
2733 2983 6.038271 GGTCAAACATAGACAACAGTTGACTT 59.962 38.462 20.98 8.54 36.98 3.01
2734 2984 7.415206 GGTCAAACATAGACAACAGTTGACTTT 60.415 37.037 20.98 12.16 36.98 2.66
2735 2985 7.968405 GTCAAACATAGACAACAGTTGACTTTT 59.032 33.333 20.98 13.60 36.98 2.27
2736 2986 8.519526 TCAAACATAGACAACAGTTGACTTTTT 58.480 29.630 20.98 15.03 36.98 1.94
2737 2987 8.586273 CAAACATAGACAACAGTTGACTTTTTG 58.414 33.333 20.98 20.38 36.98 2.44
2738 2988 7.624360 ACATAGACAACAGTTGACTTTTTGA 57.376 32.000 20.98 5.75 36.98 2.69
2739 2989 8.050778 ACATAGACAACAGTTGACTTTTTGAA 57.949 30.769 20.98 5.10 36.98 2.69
2740 2990 8.519526 ACATAGACAACAGTTGACTTTTTGAAA 58.480 29.630 20.98 4.46 36.98 2.69
2741 2991 9.352784 CATAGACAACAGTTGACTTTTTGAAAA 57.647 29.630 20.98 3.80 36.98 2.29
2742 2992 9.921637 ATAGACAACAGTTGACTTTTTGAAAAA 57.078 25.926 20.98 2.83 36.98 1.94
2743 2993 8.072238 AGACAACAGTTGACTTTTTGAAAAAC 57.928 30.769 20.56 0.00 31.83 2.43
2744 2994 7.926018 AGACAACAGTTGACTTTTTGAAAAACT 59.074 29.630 20.56 0.00 31.83 2.66
2745 2995 9.187455 GACAACAGTTGACTTTTTGAAAAACTA 57.813 29.630 20.56 0.00 0.00 2.24
2746 2996 9.535878 ACAACAGTTGACTTTTTGAAAAACTAA 57.464 25.926 20.56 0.00 0.00 2.24
2783 3033 8.575736 TTTAGGAATGGAGGGAGTATATTTCA 57.424 34.615 0.00 0.00 0.00 2.69
2784 3034 8.575736 TTAGGAATGGAGGGAGTATATTTCAA 57.424 34.615 0.00 0.00 0.00 2.69
2850 4316 2.762745 GGTGAAAGCTGAAGAACCGTA 58.237 47.619 0.00 0.00 0.00 4.02
2884 4350 3.491581 GTCATCGGACAACGTCACT 57.508 52.632 0.00 0.00 43.73 3.41
3196 4701 4.147449 CGCCGACCCAGCATCTCA 62.147 66.667 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 2.829720 AGTATAAGACACGGCAGGAACA 59.170 45.455 0.00 0.00 0.00 3.18
4 5 3.445857 GAGTATAAGACACGGCAGGAAC 58.554 50.000 0.00 0.00 0.00 3.62
5 6 2.429610 GGAGTATAAGACACGGCAGGAA 59.570 50.000 0.00 0.00 0.00 3.36
6 7 2.029623 GGAGTATAAGACACGGCAGGA 58.970 52.381 0.00 0.00 0.00 3.86
7 8 1.754803 TGGAGTATAAGACACGGCAGG 59.245 52.381 0.00 0.00 0.00 4.85
8 9 3.520290 TTGGAGTATAAGACACGGCAG 57.480 47.619 0.00 0.00 0.00 4.85
9 10 3.259876 AGTTTGGAGTATAAGACACGGCA 59.740 43.478 0.00 0.00 0.00 5.69
10 11 3.617263 CAGTTTGGAGTATAAGACACGGC 59.383 47.826 0.00 0.00 0.00 5.68
11 12 4.181578 CCAGTTTGGAGTATAAGACACGG 58.818 47.826 0.00 0.00 40.96 4.94
12 13 4.817517 ACCAGTTTGGAGTATAAGACACG 58.182 43.478 1.40 0.00 40.96 4.49
13 14 5.790593 TGACCAGTTTGGAGTATAAGACAC 58.209 41.667 1.40 0.00 40.96 3.67
14 15 6.620877 ATGACCAGTTTGGAGTATAAGACA 57.379 37.500 1.40 0.00 40.96 3.41
15 16 6.879458 ACAATGACCAGTTTGGAGTATAAGAC 59.121 38.462 1.40 0.00 40.96 3.01
16 17 7.016153 ACAATGACCAGTTTGGAGTATAAGA 57.984 36.000 1.40 0.00 40.96 2.10
17 18 8.041323 AGTACAATGACCAGTTTGGAGTATAAG 58.959 37.037 1.40 0.00 40.96 1.73
18 19 7.913789 AGTACAATGACCAGTTTGGAGTATAA 58.086 34.615 1.40 0.00 40.96 0.98
19 20 7.364408 GGAGTACAATGACCAGTTTGGAGTATA 60.364 40.741 1.40 0.00 40.96 1.47
20 21 6.374417 AGTACAATGACCAGTTTGGAGTAT 57.626 37.500 1.40 0.00 40.96 2.12
21 22 5.279809 GGAGTACAATGACCAGTTTGGAGTA 60.280 44.000 1.40 0.00 40.96 2.59
22 23 4.505039 GGAGTACAATGACCAGTTTGGAGT 60.505 45.833 1.40 0.00 40.96 3.85
23 24 4.003648 GGAGTACAATGACCAGTTTGGAG 58.996 47.826 1.40 0.00 40.96 3.86
24 25 3.244770 GGGAGTACAATGACCAGTTTGGA 60.245 47.826 1.40 0.00 40.96 3.53
25 26 3.081804 GGGAGTACAATGACCAGTTTGG 58.918 50.000 0.00 0.00 45.02 3.28
26 27 3.750371 TGGGAGTACAATGACCAGTTTG 58.250 45.455 0.00 0.00 0.00 2.93
27 28 4.657814 ATGGGAGTACAATGACCAGTTT 57.342 40.909 0.00 0.00 34.23 2.66
28 29 5.975988 ATATGGGAGTACAATGACCAGTT 57.024 39.130 0.00 0.00 34.23 3.16
29 30 8.762645 CATATATATGGGAGTACAATGACCAGT 58.237 37.037 14.04 0.00 34.23 4.00
30 31 7.712639 GCATATATATGGGAGTACAATGACCAG 59.287 40.741 21.50 0.00 34.23 4.00
31 32 7.365563 GGCATATATATGGGAGTACAATGACCA 60.366 40.741 21.50 0.00 34.32 4.02
32 33 6.992715 GGCATATATATGGGAGTACAATGACC 59.007 42.308 21.50 7.81 34.32 4.02
33 34 6.992715 GGGCATATATATGGGAGTACAATGAC 59.007 42.308 21.50 0.00 34.32 3.06
34 35 6.676189 TGGGCATATATATGGGAGTACAATGA 59.324 38.462 21.50 0.00 34.32 2.57
35 36 6.767902 GTGGGCATATATATGGGAGTACAATG 59.232 42.308 21.50 0.00 34.32 2.82
36 37 6.408092 CGTGGGCATATATATGGGAGTACAAT 60.408 42.308 21.50 0.00 34.32 2.71
37 38 5.105106 CGTGGGCATATATATGGGAGTACAA 60.105 44.000 21.50 0.00 34.32 2.41
38 39 4.404394 CGTGGGCATATATATGGGAGTACA 59.596 45.833 21.50 0.37 34.32 2.90
39 40 4.647853 TCGTGGGCATATATATGGGAGTAC 59.352 45.833 21.50 6.14 34.32 2.73
40 41 4.874199 TCGTGGGCATATATATGGGAGTA 58.126 43.478 21.50 0.00 34.32 2.59
41 42 3.706594 CTCGTGGGCATATATATGGGAGT 59.293 47.826 21.50 0.00 34.32 3.85
42 43 3.070159 CCTCGTGGGCATATATATGGGAG 59.930 52.174 21.50 0.00 34.32 4.30
43 44 3.038280 CCTCGTGGGCATATATATGGGA 58.962 50.000 21.50 0.00 34.32 4.37
44 45 3.475566 CCTCGTGGGCATATATATGGG 57.524 52.381 21.50 10.25 34.32 4.00
56 57 0.107703 TATTGCTTGAGCCTCGTGGG 60.108 55.000 5.54 0.00 41.18 4.61
57 58 1.009829 GTATTGCTTGAGCCTCGTGG 58.990 55.000 0.00 0.00 41.18 4.94
58 59 1.725641 TGTATTGCTTGAGCCTCGTG 58.274 50.000 0.00 0.00 41.18 4.35
59 60 2.076863 GTTGTATTGCTTGAGCCTCGT 58.923 47.619 0.00 0.00 41.18 4.18
60 61 2.076100 TGTTGTATTGCTTGAGCCTCG 58.924 47.619 0.00 0.00 41.18 4.63
61 62 3.503748 AGTTGTTGTATTGCTTGAGCCTC 59.496 43.478 0.00 0.00 41.18 4.70
62 63 3.490348 AGTTGTTGTATTGCTTGAGCCT 58.510 40.909 0.00 0.00 41.18 4.58
63 64 3.923017 AGTTGTTGTATTGCTTGAGCC 57.077 42.857 0.00 0.00 41.18 4.70
64 65 6.030228 GGAATAGTTGTTGTATTGCTTGAGC 58.970 40.000 0.00 0.00 42.50 4.26
65 66 7.144722 TGGAATAGTTGTTGTATTGCTTGAG 57.855 36.000 0.00 0.00 31.43 3.02
66 67 7.392953 TGATGGAATAGTTGTTGTATTGCTTGA 59.607 33.333 0.00 0.00 31.43 3.02
67 68 7.537715 TGATGGAATAGTTGTTGTATTGCTTG 58.462 34.615 0.00 0.00 31.43 4.01
68 69 7.701539 TGATGGAATAGTTGTTGTATTGCTT 57.298 32.000 0.00 0.00 31.43 3.91
69 70 7.701539 TTGATGGAATAGTTGTTGTATTGCT 57.298 32.000 0.00 0.00 31.43 3.91
70 71 7.275560 GGTTTGATGGAATAGTTGTTGTATTGC 59.724 37.037 0.00 0.00 0.00 3.56
71 72 7.759433 GGGTTTGATGGAATAGTTGTTGTATTG 59.241 37.037 0.00 0.00 0.00 1.90
72 73 7.093509 GGGGTTTGATGGAATAGTTGTTGTATT 60.094 37.037 0.00 0.00 0.00 1.89
73 74 6.379988 GGGGTTTGATGGAATAGTTGTTGTAT 59.620 38.462 0.00 0.00 0.00 2.29
74 75 5.712917 GGGGTTTGATGGAATAGTTGTTGTA 59.287 40.000 0.00 0.00 0.00 2.41
75 76 4.526650 GGGGTTTGATGGAATAGTTGTTGT 59.473 41.667 0.00 0.00 0.00 3.32
76 77 4.772100 AGGGGTTTGATGGAATAGTTGTTG 59.228 41.667 0.00 0.00 0.00 3.33
77 78 5.010708 AGGGGTTTGATGGAATAGTTGTT 57.989 39.130 0.00 0.00 0.00 2.83
78 79 4.292306 AGAGGGGTTTGATGGAATAGTTGT 59.708 41.667 0.00 0.00 0.00 3.32
79 80 4.860022 AGAGGGGTTTGATGGAATAGTTG 58.140 43.478 0.00 0.00 0.00 3.16
80 81 4.790790 AGAGAGGGGTTTGATGGAATAGTT 59.209 41.667 0.00 0.00 0.00 2.24
81 82 4.375313 AGAGAGGGGTTTGATGGAATAGT 58.625 43.478 0.00 0.00 0.00 2.12
82 83 4.202409 GGAGAGAGGGGTTTGATGGAATAG 60.202 50.000 0.00 0.00 0.00 1.73
83 84 3.716872 GGAGAGAGGGGTTTGATGGAATA 59.283 47.826 0.00 0.00 0.00 1.75
84 85 2.511637 GGAGAGAGGGGTTTGATGGAAT 59.488 50.000 0.00 0.00 0.00 3.01
85 86 1.916181 GGAGAGAGGGGTTTGATGGAA 59.084 52.381 0.00 0.00 0.00 3.53
86 87 1.584724 GGAGAGAGGGGTTTGATGGA 58.415 55.000 0.00 0.00 0.00 3.41
87 88 0.548510 GGGAGAGAGGGGTTTGATGG 59.451 60.000 0.00 0.00 0.00 3.51
88 89 1.589414 AGGGAGAGAGGGGTTTGATG 58.411 55.000 0.00 0.00 0.00 3.07
89 90 2.200955 GAAGGGAGAGAGGGGTTTGAT 58.799 52.381 0.00 0.00 0.00 2.57
90 91 1.152271 AGAAGGGAGAGAGGGGTTTGA 59.848 52.381 0.00 0.00 0.00 2.69
91 92 1.662686 AGAAGGGAGAGAGGGGTTTG 58.337 55.000 0.00 0.00 0.00 2.93
92 93 3.182976 GTTAGAAGGGAGAGAGGGGTTT 58.817 50.000 0.00 0.00 0.00 3.27
93 94 2.113777 TGTTAGAAGGGAGAGAGGGGTT 59.886 50.000 0.00 0.00 0.00 4.11
94 95 1.722851 TGTTAGAAGGGAGAGAGGGGT 59.277 52.381 0.00 0.00 0.00 4.95
95 96 2.393646 CTGTTAGAAGGGAGAGAGGGG 58.606 57.143 0.00 0.00 0.00 4.79
96 97 1.760029 GCTGTTAGAAGGGAGAGAGGG 59.240 57.143 0.00 0.00 0.00 4.30
97 98 1.407258 CGCTGTTAGAAGGGAGAGAGG 59.593 57.143 0.00 0.00 32.03 3.69
98 99 2.098443 GTCGCTGTTAGAAGGGAGAGAG 59.902 54.545 0.00 0.00 39.53 3.20
99 100 2.093106 GTCGCTGTTAGAAGGGAGAGA 58.907 52.381 0.00 0.00 39.53 3.10
100 101 1.819288 TGTCGCTGTTAGAAGGGAGAG 59.181 52.381 0.00 0.00 39.53 3.20
101 102 1.919240 TGTCGCTGTTAGAAGGGAGA 58.081 50.000 0.00 0.00 39.53 3.71
102 103 2.969628 ATGTCGCTGTTAGAAGGGAG 57.030 50.000 0.00 0.00 39.53 4.30
103 104 2.565391 TGAATGTCGCTGTTAGAAGGGA 59.435 45.455 0.00 0.00 36.84 4.20
104 105 2.972625 TGAATGTCGCTGTTAGAAGGG 58.027 47.619 0.00 0.00 0.00 3.95
105 106 5.812642 ACTATTGAATGTCGCTGTTAGAAGG 59.187 40.000 0.00 0.00 0.00 3.46
106 107 6.893958 ACTATTGAATGTCGCTGTTAGAAG 57.106 37.500 0.00 0.00 0.00 2.85
107 108 8.653338 GTTAACTATTGAATGTCGCTGTTAGAA 58.347 33.333 0.00 0.00 0.00 2.10
108 109 7.277098 GGTTAACTATTGAATGTCGCTGTTAGA 59.723 37.037 5.42 0.00 0.00 2.10
109 110 7.064134 TGGTTAACTATTGAATGTCGCTGTTAG 59.936 37.037 5.42 0.00 0.00 2.34
110 111 6.874664 TGGTTAACTATTGAATGTCGCTGTTA 59.125 34.615 5.42 0.00 0.00 2.41
111 112 5.703592 TGGTTAACTATTGAATGTCGCTGTT 59.296 36.000 5.42 0.00 0.00 3.16
112 113 5.121768 GTGGTTAACTATTGAATGTCGCTGT 59.878 40.000 5.42 0.00 0.00 4.40
113 114 5.560148 GTGGTTAACTATTGAATGTCGCTG 58.440 41.667 5.42 0.00 0.00 5.18
114 115 4.328983 CGTGGTTAACTATTGAATGTCGCT 59.671 41.667 5.42 0.00 0.00 4.93
115 116 4.493545 CCGTGGTTAACTATTGAATGTCGC 60.494 45.833 5.42 0.00 0.00 5.19
116 117 4.493545 GCCGTGGTTAACTATTGAATGTCG 60.494 45.833 5.42 0.00 0.00 4.35
117 118 4.201881 GGCCGTGGTTAACTATTGAATGTC 60.202 45.833 5.42 0.00 0.00 3.06
118 119 3.692593 GGCCGTGGTTAACTATTGAATGT 59.307 43.478 5.42 0.00 0.00 2.71
119 120 3.692101 TGGCCGTGGTTAACTATTGAATG 59.308 43.478 5.42 0.00 0.00 2.67
120 121 3.692593 GTGGCCGTGGTTAACTATTGAAT 59.307 43.478 5.42 0.00 0.00 2.57
121 122 3.075884 GTGGCCGTGGTTAACTATTGAA 58.924 45.455 5.42 0.00 0.00 2.69
122 123 2.702261 GTGGCCGTGGTTAACTATTGA 58.298 47.619 5.42 0.00 0.00 2.57
123 124 1.395608 CGTGGCCGTGGTTAACTATTG 59.604 52.381 5.42 0.00 0.00 1.90
124 125 1.676615 CCGTGGCCGTGGTTAACTATT 60.677 52.381 5.42 0.00 0.00 1.73
125 126 0.108041 CCGTGGCCGTGGTTAACTAT 60.108 55.000 5.42 0.00 0.00 2.12
126 127 1.292860 CCGTGGCCGTGGTTAACTA 59.707 57.895 5.42 0.00 0.00 2.24
127 128 2.031465 CCGTGGCCGTGGTTAACT 59.969 61.111 5.42 0.00 0.00 2.24
128 129 2.447586 TACCCGTGGCCGTGGTTAAC 62.448 60.000 14.98 0.00 38.23 2.01
129 130 1.762522 TTACCCGTGGCCGTGGTTAA 61.763 55.000 14.98 7.39 38.23 2.01
130 131 1.551908 ATTACCCGTGGCCGTGGTTA 61.552 55.000 14.98 7.52 38.23 2.85
131 132 2.897762 ATTACCCGTGGCCGTGGTT 61.898 57.895 14.98 2.18 38.23 3.67
132 133 3.324108 ATTACCCGTGGCCGTGGT 61.324 61.111 14.30 14.30 39.75 4.16
133 134 2.602746 ATCATTACCCGTGGCCGTGG 62.603 60.000 6.09 6.09 0.00 4.94
134 135 0.746563 AATCATTACCCGTGGCCGTG 60.747 55.000 0.00 0.00 0.00 4.94
135 136 0.463116 GAATCATTACCCGTGGCCGT 60.463 55.000 0.00 0.00 0.00 5.68
136 137 0.179056 AGAATCATTACCCGTGGCCG 60.179 55.000 0.00 0.00 0.00 6.13
137 138 2.052782 AAGAATCATTACCCGTGGCC 57.947 50.000 0.00 0.00 0.00 5.36
138 139 4.450082 AAAAAGAATCATTACCCGTGGC 57.550 40.909 0.00 0.00 0.00 5.01
156 157 7.880713 GTGAATAAAAGCCCCCTTTATCAAAAA 59.119 33.333 0.00 0.00 40.30 1.94
157 158 7.390823 GTGAATAAAAGCCCCCTTTATCAAAA 58.609 34.615 0.00 0.00 40.30 2.44
158 159 6.350612 CGTGAATAAAAGCCCCCTTTATCAAA 60.351 38.462 0.00 0.00 40.30 2.69
159 160 5.126384 CGTGAATAAAAGCCCCCTTTATCAA 59.874 40.000 0.00 0.00 40.30 2.57
160 161 4.642885 CGTGAATAAAAGCCCCCTTTATCA 59.357 41.667 0.00 0.00 40.30 2.15
161 162 4.037565 CCGTGAATAAAAGCCCCCTTTATC 59.962 45.833 0.00 0.00 40.30 1.75
162 163 3.958147 CCGTGAATAAAAGCCCCCTTTAT 59.042 43.478 0.00 0.00 40.30 1.40
163 164 3.358118 CCGTGAATAAAAGCCCCCTTTA 58.642 45.455 0.00 0.00 40.30 1.85
164 165 2.176045 CCGTGAATAAAAGCCCCCTTT 58.824 47.619 0.00 0.00 42.93 3.11
165 166 1.618616 CCCGTGAATAAAAGCCCCCTT 60.619 52.381 0.00 0.00 0.00 3.95
166 167 0.033503 CCCGTGAATAAAAGCCCCCT 60.034 55.000 0.00 0.00 0.00 4.79
167 168 0.323999 ACCCGTGAATAAAAGCCCCC 60.324 55.000 0.00 0.00 0.00 5.40
168 169 2.423446 TACCCGTGAATAAAAGCCCC 57.577 50.000 0.00 0.00 0.00 5.80
169 170 3.949113 TCATTACCCGTGAATAAAAGCCC 59.051 43.478 0.00 0.00 0.00 5.19
170 171 5.767816 ATCATTACCCGTGAATAAAAGCC 57.232 39.130 0.00 0.00 0.00 4.35
171 172 7.027778 AGAATCATTACCCGTGAATAAAAGC 57.972 36.000 0.00 0.00 0.00 3.51
172 173 9.104965 TGTAGAATCATTACCCGTGAATAAAAG 57.895 33.333 0.00 0.00 0.00 2.27
173 174 9.451002 TTGTAGAATCATTACCCGTGAATAAAA 57.549 29.630 0.00 0.00 0.00 1.52
174 175 9.451002 TTTGTAGAATCATTACCCGTGAATAAA 57.549 29.630 0.00 0.00 0.00 1.40
175 176 9.621629 ATTTGTAGAATCATTACCCGTGAATAA 57.378 29.630 0.00 0.00 0.00 1.40
176 177 9.051679 CATTTGTAGAATCATTACCCGTGAATA 57.948 33.333 0.00 0.00 0.00 1.75
177 178 7.013274 CCATTTGTAGAATCATTACCCGTGAAT 59.987 37.037 0.00 0.00 0.00 2.57
178 179 6.317642 CCATTTGTAGAATCATTACCCGTGAA 59.682 38.462 0.00 0.00 0.00 3.18
179 180 5.820423 CCATTTGTAGAATCATTACCCGTGA 59.180 40.000 0.00 0.00 0.00 4.35
180 181 5.008613 CCCATTTGTAGAATCATTACCCGTG 59.991 44.000 0.00 0.00 0.00 4.94
181 182 5.130350 CCCATTTGTAGAATCATTACCCGT 58.870 41.667 0.00 0.00 0.00 5.28
182 183 5.130350 ACCCATTTGTAGAATCATTACCCG 58.870 41.667 0.00 0.00 0.00 5.28
183 184 6.263168 CAGACCCATTTGTAGAATCATTACCC 59.737 42.308 0.00 0.00 0.00 3.69
184 185 6.238759 GCAGACCCATTTGTAGAATCATTACC 60.239 42.308 0.00 0.00 0.00 2.85
185 186 6.511767 CGCAGACCCATTTGTAGAATCATTAC 60.512 42.308 0.00 0.00 0.00 1.89
186 187 5.527214 CGCAGACCCATTTGTAGAATCATTA 59.473 40.000 0.00 0.00 0.00 1.90
187 188 4.336433 CGCAGACCCATTTGTAGAATCATT 59.664 41.667 0.00 0.00 0.00 2.57
188 189 3.879295 CGCAGACCCATTTGTAGAATCAT 59.121 43.478 0.00 0.00 0.00 2.45
189 190 3.270027 CGCAGACCCATTTGTAGAATCA 58.730 45.455 0.00 0.00 0.00 2.57
190 191 2.614057 CCGCAGACCCATTTGTAGAATC 59.386 50.000 0.00 0.00 0.00 2.52
191 192 2.026262 ACCGCAGACCCATTTGTAGAAT 60.026 45.455 0.00 0.00 0.00 2.40
192 193 1.349688 ACCGCAGACCCATTTGTAGAA 59.650 47.619 0.00 0.00 0.00 2.10
193 194 0.981183 ACCGCAGACCCATTTGTAGA 59.019 50.000 0.00 0.00 0.00 2.59
194 195 1.468520 CAACCGCAGACCCATTTGTAG 59.531 52.381 0.00 0.00 0.00 2.74
195 196 1.529226 CAACCGCAGACCCATTTGTA 58.471 50.000 0.00 0.00 0.00 2.41
196 197 1.178534 CCAACCGCAGACCCATTTGT 61.179 55.000 0.00 0.00 0.00 2.83
197 198 1.178534 ACCAACCGCAGACCCATTTG 61.179 55.000 0.00 0.00 0.00 2.32
198 199 1.152830 ACCAACCGCAGACCCATTT 59.847 52.632 0.00 0.00 0.00 2.32
263 265 3.614092 TCCTTTGTGCATCTCAAGATCC 58.386 45.455 0.00 0.00 31.21 3.36
291 293 6.789457 TGACAATAATATGGATCAGAGGGAGT 59.211 38.462 0.00 0.00 0.00 3.85
300 302 7.387673 TGTTCATCGGTGACAATAATATGGATC 59.612 37.037 0.00 0.00 33.11 3.36
311 313 5.298026 TCAAGAAAATGTTCATCGGTGACAA 59.702 36.000 0.00 0.00 36.09 3.18
313 315 5.356882 TCAAGAAAATGTTCATCGGTGAC 57.643 39.130 0.00 0.00 36.09 3.67
314 316 5.298026 TGTTCAAGAAAATGTTCATCGGTGA 59.702 36.000 0.00 0.00 36.09 4.02
315 317 5.518812 TGTTCAAGAAAATGTTCATCGGTG 58.481 37.500 0.00 0.00 36.09 4.94
316 318 5.766150 TGTTCAAGAAAATGTTCATCGGT 57.234 34.783 0.00 0.00 36.09 4.69
317 319 7.642071 ATTTGTTCAAGAAAATGTTCATCGG 57.358 32.000 0.00 0.00 36.09 4.18
364 367 7.937649 ACGTACTACAATGTGATAATCTGCTA 58.062 34.615 0.00 0.00 0.00 3.49
366 369 7.464830 AACGTACTACAATGTGATAATCTGC 57.535 36.000 0.00 0.00 0.00 4.26
383 389 6.600882 TTTTCAGGGAGAGAATAACGTACT 57.399 37.500 0.00 0.00 0.00 2.73
387 393 8.947115 ACTTTTATTTTCAGGGAGAGAATAACG 58.053 33.333 0.00 0.00 40.78 3.18
403 409 7.360607 CGTCCCAATACGAGTCACTTTTATTTT 60.361 37.037 0.00 0.00 45.68 1.82
429 435 1.001815 GCTCGAGCTCAGATACTCCAC 60.002 57.143 29.88 0.00 38.21 4.02
458 466 6.255215 TCTTCGATTTTTATTGTTCATCCGC 58.745 36.000 0.00 0.00 0.00 5.54
513 521 7.221259 GCACTTGTCAAAGTTTACCGTAAAAAT 59.779 33.333 5.28 0.00 44.47 1.82
520 528 3.963383 AGCACTTGTCAAAGTTTACCG 57.037 42.857 0.00 0.00 44.47 4.02
569 586 3.380004 TGTTTTGATGTCACACCTTCCAC 59.620 43.478 0.00 0.00 0.00 4.02
584 608 4.038522 TCCGGAGCATCAATTTTGTTTTGA 59.961 37.500 0.00 0.00 37.49 2.69
585 609 4.305769 TCCGGAGCATCAATTTTGTTTTG 58.694 39.130 0.00 0.00 36.25 2.44
595 619 2.092968 AGTAGCATTTCCGGAGCATCAA 60.093 45.455 15.74 2.41 36.25 2.57
600 624 1.327764 CGAAAGTAGCATTTCCGGAGC 59.672 52.381 3.34 4.91 36.08 4.70
605 629 4.419522 TGCTTTCGAAAGTAGCATTTCC 57.580 40.909 32.32 16.66 41.95 3.13
618 642 2.030893 CAGTGCTCCAAAATGCTTTCGA 60.031 45.455 0.00 0.00 0.00 3.71
621 645 4.612264 AATCAGTGCTCCAAAATGCTTT 57.388 36.364 0.00 0.00 0.00 3.51
625 649 6.607735 AAACAAAATCAGTGCTCCAAAATG 57.392 33.333 0.00 0.00 0.00 2.32
636 660 6.238648 CGTGGGTAGAGAAAAACAAAATCAGT 60.239 38.462 0.00 0.00 0.00 3.41
645 669 2.994578 GAGAGCGTGGGTAGAGAAAAAC 59.005 50.000 0.00 0.00 0.00 2.43
649 673 0.039180 TGGAGAGCGTGGGTAGAGAA 59.961 55.000 0.00 0.00 0.00 2.87
651 675 0.965866 TGTGGAGAGCGTGGGTAGAG 60.966 60.000 0.00 0.00 0.00 2.43
652 676 0.541063 TTGTGGAGAGCGTGGGTAGA 60.541 55.000 0.00 0.00 0.00 2.59
653 677 0.320374 TTTGTGGAGAGCGTGGGTAG 59.680 55.000 0.00 0.00 0.00 3.18
654 678 0.981183 ATTTGTGGAGAGCGTGGGTA 59.019 50.000 0.00 0.00 0.00 3.69
655 679 0.981183 TATTTGTGGAGAGCGTGGGT 59.019 50.000 0.00 0.00 0.00 4.51
656 680 1.942657 CATATTTGTGGAGAGCGTGGG 59.057 52.381 0.00 0.00 0.00 4.61
657 681 2.905075 TCATATTTGTGGAGAGCGTGG 58.095 47.619 0.00 0.00 0.00 4.94
661 685 6.228995 TCATGAGATCATATTTGTGGAGAGC 58.771 40.000 0.00 0.00 34.26 4.09
692 716 7.764331 ACAAACGTTCTAAGTGTTGGTATTTT 58.236 30.769 0.00 0.00 28.21 1.82
693 717 7.066043 TGACAAACGTTCTAAGTGTTGGTATTT 59.934 33.333 0.00 0.00 30.13 1.40
694 718 6.539464 TGACAAACGTTCTAAGTGTTGGTATT 59.461 34.615 0.00 0.00 30.13 1.89
695 719 6.050432 TGACAAACGTTCTAAGTGTTGGTAT 58.950 36.000 0.00 0.00 30.13 2.73
726 750 3.489738 GCGCAAATGAGCTTGGTTATGAT 60.490 43.478 0.30 0.00 37.86 2.45
727 751 2.159393 GCGCAAATGAGCTTGGTTATGA 60.159 45.455 0.30 0.00 37.86 2.15
728 752 2.187707 GCGCAAATGAGCTTGGTTATG 58.812 47.619 0.30 0.00 37.86 1.90
729 753 2.566952 GCGCAAATGAGCTTGGTTAT 57.433 45.000 0.30 0.00 37.86 1.89
731 755 4.972591 GCGCAAATGAGCTTGGTT 57.027 50.000 0.30 0.00 37.86 3.67
737 761 2.101770 GCTGGAGCGCAAATGAGC 59.898 61.111 11.47 5.62 41.28 4.26
747 771 3.326836 AAGTAACTTCTGAGCTGGAGC 57.673 47.619 0.00 0.00 42.49 4.70
748 772 3.923461 CGAAAGTAACTTCTGAGCTGGAG 59.077 47.826 0.00 0.00 0.00 3.86
749 773 3.861131 GCGAAAGTAACTTCTGAGCTGGA 60.861 47.826 0.00 0.00 0.00 3.86
750 774 2.413453 GCGAAAGTAACTTCTGAGCTGG 59.587 50.000 0.00 0.00 0.00 4.85
751 775 3.321497 AGCGAAAGTAACTTCTGAGCTG 58.679 45.455 0.00 0.00 0.00 4.24
752 776 3.005897 TGAGCGAAAGTAACTTCTGAGCT 59.994 43.478 0.00 0.00 34.92 4.09
753 777 3.122111 GTGAGCGAAAGTAACTTCTGAGC 59.878 47.826 0.00 0.00 0.00 4.26
754 778 4.384247 CAGTGAGCGAAAGTAACTTCTGAG 59.616 45.833 0.00 0.00 0.00 3.35
756 780 4.051922 ACAGTGAGCGAAAGTAACTTCTG 58.948 43.478 0.00 0.00 0.00 3.02
757 781 4.038162 AGACAGTGAGCGAAAGTAACTTCT 59.962 41.667 0.00 0.00 0.00 2.85
758 782 4.299978 AGACAGTGAGCGAAAGTAACTTC 58.700 43.478 0.00 0.00 0.00 3.01
759 783 4.323553 AGACAGTGAGCGAAAGTAACTT 57.676 40.909 0.00 0.00 0.00 2.66
761 785 4.543692 TGTAGACAGTGAGCGAAAGTAAC 58.456 43.478 0.00 0.00 0.00 2.50
774 830 6.929606 GTGGAAGAGTTGTTATTGTAGACAGT 59.070 38.462 0.00 0.00 0.00 3.55
775 831 6.369065 GGTGGAAGAGTTGTTATTGTAGACAG 59.631 42.308 0.00 0.00 0.00 3.51
831 929 9.914834 AGCTATAAATTATAGTTGTTGGAACCA 57.085 29.630 18.16 0.00 40.19 3.67
846 944 8.796475 GCCTTGATCAAATGGAGCTATAAATTA 58.204 33.333 16.00 0.00 31.67 1.40
847 945 7.288389 TGCCTTGATCAAATGGAGCTATAAATT 59.712 33.333 16.00 0.00 31.67 1.82
849 947 6.128486 TGCCTTGATCAAATGGAGCTATAAA 58.872 36.000 16.00 0.00 31.67 1.40
852 950 4.174704 TGCCTTGATCAAATGGAGCTAT 57.825 40.909 16.00 0.00 31.67 2.97
853 951 3.650281 TGCCTTGATCAAATGGAGCTA 57.350 42.857 16.00 0.00 31.67 3.32
854 952 2.519771 TGCCTTGATCAAATGGAGCT 57.480 45.000 16.00 0.00 31.67 4.09
855 953 3.814005 ATTGCCTTGATCAAATGGAGC 57.186 42.857 16.00 11.11 0.00 4.70
856 954 7.494211 TCAATAATTGCCTTGATCAAATGGAG 58.506 34.615 16.00 1.48 0.00 3.86
857 955 7.421087 TCAATAATTGCCTTGATCAAATGGA 57.579 32.000 16.00 6.37 0.00 3.41
858 956 7.929245 TCATCAATAATTGCCTTGATCAAATGG 59.071 33.333 9.88 9.37 39.47 3.16
859 957 8.880878 TCATCAATAATTGCCTTGATCAAATG 57.119 30.769 9.88 5.89 39.47 2.32
877 975 9.887629 TGTTGCACCATAAAATTAATCATCAAT 57.112 25.926 0.00 0.00 0.00 2.57
878 976 9.716531 TTGTTGCACCATAAAATTAATCATCAA 57.283 25.926 0.00 0.00 0.00 2.57
879 977 9.149225 GTTGTTGCACCATAAAATTAATCATCA 57.851 29.630 0.00 0.00 0.00 3.07
880 978 9.149225 TGTTGTTGCACCATAAAATTAATCATC 57.851 29.630 0.00 0.00 0.00 2.92
881 979 9.499479 TTGTTGTTGCACCATAAAATTAATCAT 57.501 25.926 0.00 0.00 0.00 2.45
882 980 8.893219 TTGTTGTTGCACCATAAAATTAATCA 57.107 26.923 0.00 0.00 0.00 2.57
883 981 9.592720 GTTTGTTGTTGCACCATAAAATTAATC 57.407 29.630 0.00 0.00 0.00 1.75
884 982 9.336171 AGTTTGTTGTTGCACCATAAAATTAAT 57.664 25.926 0.00 0.00 0.00 1.40
1001 1121 2.984562 TGATTGTTTGATCTAGGCGCA 58.015 42.857 10.83 0.00 0.00 6.09
1007 1127 4.149511 TCGGCCATGATTGTTTGATCTA 57.850 40.909 2.24 0.00 0.00 1.98
1342 1462 1.534163 CATATCCGGTGATTGCAGCTG 59.466 52.381 10.11 10.11 40.29 4.24
1343 1463 1.544093 CCATATCCGGTGATTGCAGCT 60.544 52.381 0.00 0.00 40.29 4.24
1517 1637 4.838486 CGCTCTCACCCTCGACGC 62.838 72.222 0.00 0.00 0.00 5.19
1592 1713 5.870978 GCAATATAATGGGGAAATGCATCAC 59.129 40.000 0.00 0.00 33.00 3.06
1594 1715 6.040209 TGCAATATAATGGGGAAATGCATC 57.960 37.500 0.00 0.00 37.61 3.91
1595 1716 5.781306 TCTGCAATATAATGGGGAAATGCAT 59.219 36.000 0.00 0.00 41.19 3.96
1596 1717 5.146298 TCTGCAATATAATGGGGAAATGCA 58.854 37.500 0.00 0.00 39.95 3.96
1597 1718 5.726980 TCTGCAATATAATGGGGAAATGC 57.273 39.130 0.00 0.00 0.00 3.56
1598 1719 6.405065 CGGATCTGCAATATAATGGGGAAATG 60.405 42.308 0.00 0.00 0.00 2.32
1599 1720 5.653769 CGGATCTGCAATATAATGGGGAAAT 59.346 40.000 0.00 0.00 0.00 2.17
1600 1721 5.009631 CGGATCTGCAATATAATGGGGAAA 58.990 41.667 0.00 0.00 0.00 3.13
1601 1722 4.288366 TCGGATCTGCAATATAATGGGGAA 59.712 41.667 0.00 0.00 0.00 3.97
1603 1724 4.220693 TCGGATCTGCAATATAATGGGG 57.779 45.455 0.00 0.00 0.00 4.96
1604 1725 5.065602 CACATCGGATCTGCAATATAATGGG 59.934 44.000 0.00 0.00 0.00 4.00
1605 1726 5.065602 CCACATCGGATCTGCAATATAATGG 59.934 44.000 0.00 0.00 36.56 3.16
1606 1727 5.065602 CCCACATCGGATCTGCAATATAATG 59.934 44.000 0.00 0.00 36.56 1.90
1613 1738 0.839277 ATCCCACATCGGATCTGCAA 59.161 50.000 0.00 0.00 38.28 4.08
1636 1761 1.003580 GCAAGTCTGACCAGGGATGAA 59.996 52.381 3.76 0.00 0.00 2.57
1637 1762 0.615331 GCAAGTCTGACCAGGGATGA 59.385 55.000 3.76 0.00 0.00 2.92
1650 1775 0.584054 CGCGCATCGTTAAGCAAGTC 60.584 55.000 8.75 0.00 0.00 3.01
1662 1787 2.401195 GGCTGAAACTCGCGCATC 59.599 61.111 8.75 0.00 0.00 3.91
1706 1831 1.665679 GAATTCTCGCCTTGAATCGCA 59.334 47.619 0.00 0.00 33.54 5.10
1801 1926 2.881389 CGACGAAGGCTCTGAGCT 59.119 61.111 27.09 10.35 41.99 4.09
1865 1993 0.521659 CTCGTCTCGCGGTTCTTCTC 60.522 60.000 6.13 0.00 41.72 2.87
1885 2013 2.291996 TGTCTAGCCAAGCCCAGTAGTA 60.292 50.000 0.00 0.00 0.00 1.82
1902 2033 3.067091 CCTGCAGGCTGAGTGTCT 58.933 61.111 22.33 0.00 0.00 3.41
2448 2589 7.309770 ACATCTTAAGAAAGAGTTCAGGTCT 57.690 36.000 9.71 0.00 44.79 3.85
2490 2631 4.553330 AGTACACAGGACGAATTTCCAT 57.447 40.909 0.00 0.00 38.25 3.41
2522 2772 9.720769 ATAATACACCTTATATTGAGGAAACGG 57.279 33.333 10.81 0.00 37.72 4.44
2566 2816 5.774498 AAACTTGGCCAAACTTAGAGAAG 57.226 39.130 20.91 5.88 38.76 2.85
2567 2817 8.380099 TCTATAAACTTGGCCAAACTTAGAGAA 58.620 33.333 26.33 16.84 0.00 2.87
2568 2818 7.822822 GTCTATAAACTTGGCCAAACTTAGAGA 59.177 37.037 25.50 25.50 0.00 3.10
2569 2819 7.606456 TGTCTATAAACTTGGCCAAACTTAGAG 59.394 37.037 20.91 22.32 0.00 2.43
2570 2820 7.455058 TGTCTATAAACTTGGCCAAACTTAGA 58.545 34.615 20.91 16.82 0.00 2.10
2571 2821 7.681939 TGTCTATAAACTTGGCCAAACTTAG 57.318 36.000 20.91 9.94 0.00 2.18
2572 2822 8.466617 TTTGTCTATAAACTTGGCCAAACTTA 57.533 30.769 20.91 18.60 0.00 2.24
2573 2823 6.969993 TTGTCTATAAACTTGGCCAAACTT 57.030 33.333 20.91 17.05 0.00 2.66
2574 2824 6.969993 TTTGTCTATAAACTTGGCCAAACT 57.030 33.333 20.91 6.38 0.00 2.66
2575 2825 8.601845 ATTTTTGTCTATAAACTTGGCCAAAC 57.398 30.769 20.91 12.48 0.00 2.93
2578 2828 9.249053 TGATATTTTTGTCTATAAACTTGGCCA 57.751 29.630 0.00 0.00 0.00 5.36
2689 2939 9.685828 GTTTGACCAACTTTACAGCAAAATATA 57.314 29.630 0.00 0.00 31.92 0.86
2690 2940 8.200792 TGTTTGACCAACTTTACAGCAAAATAT 58.799 29.630 0.00 0.00 36.21 1.28
2691 2941 7.548097 TGTTTGACCAACTTTACAGCAAAATA 58.452 30.769 0.00 0.00 36.21 1.40
2692 2942 6.402222 TGTTTGACCAACTTTACAGCAAAAT 58.598 32.000 0.00 0.00 36.21 1.82
2693 2943 5.784177 TGTTTGACCAACTTTACAGCAAAA 58.216 33.333 0.00 0.00 36.21 2.44
2694 2944 5.392767 TGTTTGACCAACTTTACAGCAAA 57.607 34.783 0.00 0.00 36.21 3.68
2695 2945 5.590530 ATGTTTGACCAACTTTACAGCAA 57.409 34.783 0.00 0.00 36.21 3.91
2696 2946 6.017440 GTCTATGTTTGACCAACTTTACAGCA 60.017 38.462 0.00 0.00 36.21 4.41
2697 2947 6.017440 TGTCTATGTTTGACCAACTTTACAGC 60.017 38.462 0.00 0.00 36.21 4.40
2698 2948 7.490962 TGTCTATGTTTGACCAACTTTACAG 57.509 36.000 0.00 0.00 36.21 2.74
2699 2949 7.337184 TGTTGTCTATGTTTGACCAACTTTACA 59.663 33.333 0.00 0.00 36.21 2.41
2700 2950 7.699566 TGTTGTCTATGTTTGACCAACTTTAC 58.300 34.615 0.00 0.00 36.21 2.01
2701 2951 7.554835 ACTGTTGTCTATGTTTGACCAACTTTA 59.445 33.333 0.00 0.00 36.21 1.85
2702 2952 6.377146 ACTGTTGTCTATGTTTGACCAACTTT 59.623 34.615 0.00 0.00 36.21 2.66
2703 2953 5.885912 ACTGTTGTCTATGTTTGACCAACTT 59.114 36.000 0.00 0.00 36.21 2.66
2704 2954 5.437060 ACTGTTGTCTATGTTTGACCAACT 58.563 37.500 0.00 0.00 36.21 3.16
2705 2955 5.751243 ACTGTTGTCTATGTTTGACCAAC 57.249 39.130 0.00 0.00 33.83 3.77
2706 2956 5.883115 TCAACTGTTGTCTATGTTTGACCAA 59.117 36.000 19.12 0.00 33.83 3.67
2707 2957 5.295787 GTCAACTGTTGTCTATGTTTGACCA 59.704 40.000 19.12 0.00 33.83 4.02
2708 2958 5.527582 AGTCAACTGTTGTCTATGTTTGACC 59.472 40.000 19.12 0.00 33.83 4.02
2709 2959 6.604735 AGTCAACTGTTGTCTATGTTTGAC 57.395 37.500 19.12 7.06 35.21 3.18
2710 2960 7.624360 AAAGTCAACTGTTGTCTATGTTTGA 57.376 32.000 18.10 0.00 0.00 2.69
2711 2961 8.586273 CAAAAAGTCAACTGTTGTCTATGTTTG 58.414 33.333 18.10 20.31 0.00 2.93
2712 2962 8.519526 TCAAAAAGTCAACTGTTGTCTATGTTT 58.480 29.630 18.10 15.17 0.00 2.83
2713 2963 8.050778 TCAAAAAGTCAACTGTTGTCTATGTT 57.949 30.769 18.10 11.23 0.00 2.71
2714 2964 7.624360 TCAAAAAGTCAACTGTTGTCTATGT 57.376 32.000 18.10 6.70 0.00 2.29
2715 2965 8.909708 TTTCAAAAAGTCAACTGTTGTCTATG 57.090 30.769 18.10 16.41 0.00 2.23
2716 2966 9.921637 TTTTTCAAAAAGTCAACTGTTGTCTAT 57.078 25.926 18.10 9.54 0.00 1.98
2717 2967 9.187455 GTTTTTCAAAAAGTCAACTGTTGTCTA 57.813 29.630 18.10 2.66 0.00 2.59
2718 2968 7.926018 AGTTTTTCAAAAAGTCAACTGTTGTCT 59.074 29.630 19.12 16.12 0.00 3.41
2719 2969 8.072238 AGTTTTTCAAAAAGTCAACTGTTGTC 57.928 30.769 19.12 14.15 0.00 3.18
2720 2970 9.535878 TTAGTTTTTCAAAAAGTCAACTGTTGT 57.464 25.926 19.12 0.00 0.00 3.32
2746 2996 8.836735 CCCTCCATTCCTAAATATAAGGTGTAT 58.163 37.037 4.41 0.00 35.48 2.29
2747 2997 8.020253 TCCCTCCATTCCTAAATATAAGGTGTA 58.980 37.037 4.41 0.00 35.48 2.90
2748 2998 6.855061 TCCCTCCATTCCTAAATATAAGGTGT 59.145 38.462 4.41 0.00 35.48 4.16
2749 2999 7.017651 ACTCCCTCCATTCCTAAATATAAGGTG 59.982 40.741 4.41 0.00 35.48 4.00
2750 3000 7.089566 ACTCCCTCCATTCCTAAATATAAGGT 58.910 38.462 4.41 0.00 35.48 3.50
2751 3001 7.575499 ACTCCCTCCATTCCTAAATATAAGG 57.425 40.000 0.00 0.00 35.26 2.69
2766 3016 6.381498 TTGTGTTGAAATATACTCCCTCCA 57.619 37.500 0.00 0.00 0.00 3.86
2850 4316 0.762418 TGACACCACAACGGATTCCT 59.238 50.000 0.30 0.00 38.63 3.36
2854 4320 3.137484 CGATGACACCACAACGGAT 57.863 52.632 0.00 0.00 38.63 4.18
2928 4394 4.292178 GGGAGGAGCAGATCGCCG 62.292 72.222 6.02 0.00 44.04 6.46
3184 4689 0.111061 TGCTGTTTGAGATGCTGGGT 59.889 50.000 0.00 0.00 0.00 4.51
3196 4701 1.026718 GCTACGGGATGCTGCTGTTT 61.027 55.000 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.