Multiple sequence alignment - TraesCS2B01G526700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G526700 chr2B 100.000 3139 0 0 1 3139 721114545 721111407 0.000000e+00 5797.0
1 TraesCS2B01G526700 chr2A 93.379 2326 109 15 369 2673 728759616 728757315 0.000000e+00 3400.0
2 TraesCS2B01G526700 chr2A 97.619 84 2 0 3052 3135 728753609 728753526 9.070000e-31 145.0
3 TraesCS2B01G526700 chr2D 95.809 1694 61 5 557 2246 594103025 594101338 0.000000e+00 2726.0
4 TraesCS2B01G526700 chr2D 89.286 84 7 1 3052 3135 594068944 594068863 1.540000e-18 104.0
5 TraesCS2B01G526700 chr6D 86.486 74 6 2 2255 2328 232123209 232123140 9.330000e-11 78.7
6 TraesCS2B01G526700 chr6B 84.416 77 7 3 2255 2330 310354725 310354797 1.560000e-08 71.3
7 TraesCS2B01G526700 chr6A 83.099 71 7 3 2261 2330 311859605 311859539 3.380000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G526700 chr2B 721111407 721114545 3138 True 5797.0 5797 100.000 1 3139 1 chr2B.!!$R1 3138
1 TraesCS2B01G526700 chr2A 728753526 728759616 6090 True 1772.5 3400 95.499 369 3135 2 chr2A.!!$R1 2766
2 TraesCS2B01G526700 chr2D 594101338 594103025 1687 True 2726.0 2726 95.809 557 2246 1 chr2D.!!$R2 1689


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
207 208 0.038709 GCTGGAGGCGCAGATACTAG 60.039 60.0 10.83 3.73 0.00 2.57 F
237 238 0.108138 CTCGACCTAAAGCTGGGTGG 60.108 60.0 10.44 9.49 36.34 4.61 F
250 251 0.249120 TGGGTGGAGTAGATTGCGTG 59.751 55.0 0.00 0.00 0.00 5.34 F
252 253 0.249398 GGTGGAGTAGATTGCGTGGT 59.751 55.0 0.00 0.00 0.00 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1560 1581 1.004595 CTGTCATCACAGCATCCACG 58.995 55.000 0.00 0.00 43.77 4.94 R
1639 1660 2.275418 GAACATCACGGGCCCCAT 59.725 61.111 18.66 0.37 0.00 4.00 R
1978 1999 2.751436 GGCATCGGCAGCTTTGGA 60.751 61.111 0.00 0.00 43.71 3.53 R
2172 2193 3.684788 CCTGGCAACTACATGTTCTACAC 59.315 47.826 2.30 0.00 36.63 2.90 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.008035 CCCGTCGGTTAATCGCTC 57.992 61.111 11.06 0.00 0.00 5.03
18 19 1.140161 CCCGTCGGTTAATCGCTCA 59.860 57.895 11.06 0.00 0.00 4.26
19 20 1.143969 CCCGTCGGTTAATCGCTCAC 61.144 60.000 11.06 0.00 0.00 3.51
20 21 1.143969 CCGTCGGTTAATCGCTCACC 61.144 60.000 2.43 0.00 0.00 4.02
22 23 3.003478 CGGTTAATCGCTCACCGC 58.997 61.111 0.00 0.00 46.45 5.68
23 24 2.522638 CGGTTAATCGCTCACCGCC 61.523 63.158 0.00 0.00 46.45 6.13
24 25 2.522638 GGTTAATCGCTCACCGCCG 61.523 63.158 0.00 0.00 36.73 6.46
25 26 1.517694 GTTAATCGCTCACCGCCGA 60.518 57.895 0.00 0.00 36.73 5.54
26 27 0.874607 GTTAATCGCTCACCGCCGAT 60.875 55.000 0.00 0.00 36.73 4.18
27 28 0.596600 TTAATCGCTCACCGCCGATC 60.597 55.000 0.00 0.00 36.73 3.69
28 29 1.730451 TAATCGCTCACCGCCGATCA 61.730 55.000 0.00 0.00 36.73 2.92
29 30 3.774959 ATCGCTCACCGCCGATCAC 62.775 63.158 0.00 0.00 36.73 3.06
30 31 4.498520 CGCTCACCGCCGATCACT 62.499 66.667 0.00 0.00 34.21 3.41
31 32 2.583593 GCTCACCGCCGATCACTC 60.584 66.667 0.00 0.00 0.00 3.51
32 33 2.885113 CTCACCGCCGATCACTCA 59.115 61.111 0.00 0.00 0.00 3.41
33 34 1.439228 CTCACCGCCGATCACTCAT 59.561 57.895 0.00 0.00 0.00 2.90
34 35 0.596083 CTCACCGCCGATCACTCATC 60.596 60.000 0.00 0.00 0.00 2.92
35 36 1.141665 CACCGCCGATCACTCATCA 59.858 57.895 0.00 0.00 0.00 3.07
36 37 1.141881 ACCGCCGATCACTCATCAC 59.858 57.895 0.00 0.00 0.00 3.06
37 38 1.323271 ACCGCCGATCACTCATCACT 61.323 55.000 0.00 0.00 0.00 3.41
38 39 0.873312 CCGCCGATCACTCATCACTG 60.873 60.000 0.00 0.00 0.00 3.66
39 40 0.179127 CGCCGATCACTCATCACTGT 60.179 55.000 0.00 0.00 0.00 3.55
40 41 1.284657 GCCGATCACTCATCACTGTG 58.715 55.000 0.17 0.17 35.68 3.66
41 42 1.284657 CCGATCACTCATCACTGTGC 58.715 55.000 2.12 0.00 34.49 4.57
42 43 1.284657 CGATCACTCATCACTGTGCC 58.715 55.000 2.12 0.00 34.49 5.01
43 44 1.134877 CGATCACTCATCACTGTGCCT 60.135 52.381 2.12 0.00 34.49 4.75
44 45 2.277969 GATCACTCATCACTGTGCCTG 58.722 52.381 2.12 3.52 34.49 4.85
45 46 0.321034 TCACTCATCACTGTGCCTGC 60.321 55.000 2.12 0.00 34.49 4.85
46 47 1.375140 ACTCATCACTGTGCCTGCG 60.375 57.895 2.12 1.19 0.00 5.18
47 48 2.046988 TCATCACTGTGCCTGCGG 60.047 61.111 2.12 0.00 0.00 5.69
83 84 3.172229 GCGATTAGCTTCTTCAGTCCT 57.828 47.619 0.00 0.00 44.04 3.85
84 85 2.863137 GCGATTAGCTTCTTCAGTCCTG 59.137 50.000 0.00 0.00 44.04 3.86
85 86 3.452474 CGATTAGCTTCTTCAGTCCTGG 58.548 50.000 0.00 0.00 0.00 4.45
86 87 2.770164 TTAGCTTCTTCAGTCCTGGC 57.230 50.000 0.00 0.00 0.00 4.85
87 88 0.905357 TAGCTTCTTCAGTCCTGGCC 59.095 55.000 0.00 0.00 0.00 5.36
88 89 0.839853 AGCTTCTTCAGTCCTGGCCT 60.840 55.000 3.32 0.00 0.00 5.19
89 90 0.676151 GCTTCTTCAGTCCTGGCCTG 60.676 60.000 3.32 2.54 0.00 4.85
90 91 0.979665 CTTCTTCAGTCCTGGCCTGA 59.020 55.000 11.88 2.77 37.18 3.86
91 92 0.687354 TTCTTCAGTCCTGGCCTGAC 59.313 55.000 6.99 14.11 38.62 3.51
92 93 1.194781 TCTTCAGTCCTGGCCTGACC 61.195 60.000 18.67 6.42 38.62 4.02
93 94 2.190488 CTTCAGTCCTGGCCTGACCC 62.190 65.000 18.67 4.22 38.62 4.46
94 95 4.087892 CAGTCCTGGCCTGACCCG 62.088 72.222 18.67 9.52 37.83 5.28
95 96 4.640690 AGTCCTGGCCTGACCCGT 62.641 66.667 18.67 2.33 37.83 5.28
96 97 4.394712 GTCCTGGCCTGACCCGTG 62.395 72.222 11.88 0.00 37.83 4.94
97 98 4.954118 TCCTGGCCTGACCCGTGT 62.954 66.667 11.88 0.00 37.83 4.49
98 99 3.953775 CCTGGCCTGACCCGTGTT 61.954 66.667 11.88 0.00 37.83 3.32
99 100 2.669569 CTGGCCTGACCCGTGTTG 60.670 66.667 3.32 0.00 37.83 3.33
100 101 4.263572 TGGCCTGACCCGTGTTGG 62.264 66.667 3.32 0.00 37.83 3.77
101 102 4.265056 GGCCTGACCCGTGTTGGT 62.265 66.667 0.00 0.00 42.79 3.67
102 103 2.203294 GCCTGACCCGTGTTGGTT 60.203 61.111 0.00 0.00 39.24 3.67
103 104 1.826487 GCCTGACCCGTGTTGGTTT 60.826 57.895 0.00 0.00 39.24 3.27
104 105 2.029743 CCTGACCCGTGTTGGTTTG 58.970 57.895 0.00 0.00 39.24 2.93
105 106 1.452145 CCTGACCCGTGTTGGTTTGG 61.452 60.000 0.00 0.00 39.24 3.28
107 108 2.123640 ACCCGTGTTGGTTTGGGG 60.124 61.111 0.65 0.00 46.38 4.96
108 109 2.915137 CCCGTGTTGGTTTGGGGG 60.915 66.667 0.00 0.00 38.03 5.40
109 110 2.196229 CCGTGTTGGTTTGGGGGA 59.804 61.111 0.00 0.00 0.00 4.81
110 111 1.228737 CCGTGTTGGTTTGGGGGAT 60.229 57.895 0.00 0.00 0.00 3.85
111 112 1.248101 CCGTGTTGGTTTGGGGGATC 61.248 60.000 0.00 0.00 0.00 3.36
112 113 0.251165 CGTGTTGGTTTGGGGGATCT 60.251 55.000 0.00 0.00 0.00 2.75
113 114 1.545841 GTGTTGGTTTGGGGGATCTC 58.454 55.000 0.00 0.00 0.00 2.75
114 115 1.075536 GTGTTGGTTTGGGGGATCTCT 59.924 52.381 0.00 0.00 0.00 3.10
115 116 2.307686 GTGTTGGTTTGGGGGATCTCTA 59.692 50.000 0.00 0.00 0.00 2.43
116 117 2.576191 TGTTGGTTTGGGGGATCTCTAG 59.424 50.000 0.00 0.00 0.00 2.43
117 118 2.576648 GTTGGTTTGGGGGATCTCTAGT 59.423 50.000 0.00 0.00 0.00 2.57
118 119 2.478292 TGGTTTGGGGGATCTCTAGTC 58.522 52.381 0.00 0.00 0.00 2.59
119 120 1.769465 GGTTTGGGGGATCTCTAGTCC 59.231 57.143 0.00 0.00 34.92 3.85
120 121 1.413077 GTTTGGGGGATCTCTAGTCCG 59.587 57.143 0.00 0.00 36.58 4.79
121 122 0.931468 TTGGGGGATCTCTAGTCCGA 59.069 55.000 0.00 0.00 36.58 4.55
122 123 0.478942 TGGGGGATCTCTAGTCCGAG 59.521 60.000 0.00 0.00 36.58 4.63
123 124 0.479378 GGGGGATCTCTAGTCCGAGT 59.521 60.000 0.00 0.00 36.58 4.18
124 125 1.611519 GGGGATCTCTAGTCCGAGTG 58.388 60.000 0.00 0.00 36.58 3.51
125 126 1.143277 GGGGATCTCTAGTCCGAGTGA 59.857 57.143 0.00 0.00 36.58 3.41
126 127 2.500229 GGGATCTCTAGTCCGAGTGAG 58.500 57.143 0.00 0.00 36.58 3.51
127 128 2.158726 GGGATCTCTAGTCCGAGTGAGT 60.159 54.545 0.00 0.00 36.58 3.41
128 129 2.875933 GGATCTCTAGTCCGAGTGAGTG 59.124 54.545 0.00 0.00 32.83 3.51
129 130 3.432467 GGATCTCTAGTCCGAGTGAGTGA 60.432 52.174 0.00 0.00 32.83 3.41
130 131 2.975266 TCTCTAGTCCGAGTGAGTGAC 58.025 52.381 0.00 0.00 32.83 3.67
131 132 2.011222 CTCTAGTCCGAGTGAGTGACC 58.989 57.143 0.00 0.00 0.00 4.02
132 133 0.727970 CTAGTCCGAGTGAGTGACCG 59.272 60.000 0.00 0.00 0.00 4.79
133 134 0.322648 TAGTCCGAGTGAGTGACCGA 59.677 55.000 0.00 0.00 0.00 4.69
134 135 0.322636 AGTCCGAGTGAGTGACCGAT 60.323 55.000 0.00 0.00 0.00 4.18
135 136 0.526662 GTCCGAGTGAGTGACCGATT 59.473 55.000 0.00 0.00 0.00 3.34
136 137 0.809385 TCCGAGTGAGTGACCGATTC 59.191 55.000 0.00 0.00 0.00 2.52
137 138 0.523546 CCGAGTGAGTGACCGATTCG 60.524 60.000 0.00 0.00 0.00 3.34
147 148 4.143333 CCGATTCGGGTCGCCTGT 62.143 66.667 17.53 0.00 44.15 4.00
148 149 2.125673 CGATTCGGGTCGCCTGTT 60.126 61.111 0.00 0.00 34.56 3.16
149 150 2.165301 CGATTCGGGTCGCCTGTTC 61.165 63.158 0.00 3.61 34.56 3.18
150 151 1.218316 GATTCGGGTCGCCTGTTCT 59.782 57.895 4.89 0.00 0.00 3.01
151 152 1.079127 ATTCGGGTCGCCTGTTCTG 60.079 57.895 4.89 0.00 0.00 3.02
152 153 1.827399 ATTCGGGTCGCCTGTTCTGT 61.827 55.000 4.89 0.00 0.00 3.41
153 154 2.709125 TTCGGGTCGCCTGTTCTGTG 62.709 60.000 4.89 0.00 0.00 3.66
154 155 2.741092 GGGTCGCCTGTTCTGTGA 59.259 61.111 0.00 0.00 0.00 3.58
155 156 1.296715 GGGTCGCCTGTTCTGTGAT 59.703 57.895 0.00 0.00 0.00 3.06
156 157 0.741221 GGGTCGCCTGTTCTGTGATC 60.741 60.000 0.00 0.00 0.00 2.92
157 158 0.741221 GGTCGCCTGTTCTGTGATCC 60.741 60.000 0.00 0.00 0.00 3.36
158 159 0.741221 GTCGCCTGTTCTGTGATCCC 60.741 60.000 0.00 0.00 0.00 3.85
159 160 1.191489 TCGCCTGTTCTGTGATCCCA 61.191 55.000 0.00 0.00 0.00 4.37
160 161 1.021390 CGCCTGTTCTGTGATCCCAC 61.021 60.000 0.00 0.00 43.46 4.61
175 176 2.666862 CACACGCGGGGCTGTTTA 60.667 61.111 15.46 0.00 0.00 2.01
176 177 2.111460 ACACGCGGGGCTGTTTAA 59.889 55.556 15.46 0.00 0.00 1.52
177 178 1.302993 ACACGCGGGGCTGTTTAAT 60.303 52.632 15.46 0.00 0.00 1.40
178 179 1.303091 ACACGCGGGGCTGTTTAATC 61.303 55.000 15.46 0.00 0.00 1.75
179 180 2.104253 ACGCGGGGCTGTTTAATCG 61.104 57.895 12.47 0.00 0.00 3.34
180 181 2.104253 CGCGGGGCTGTTTAATCGT 61.104 57.895 0.00 0.00 0.00 3.73
181 182 1.719709 GCGGGGCTGTTTAATCGTC 59.280 57.895 0.00 0.00 0.00 4.20
182 183 0.743345 GCGGGGCTGTTTAATCGTCT 60.743 55.000 0.00 0.00 0.00 4.18
183 184 1.287425 CGGGGCTGTTTAATCGTCTC 58.713 55.000 0.00 0.00 0.00 3.36
184 185 1.287425 GGGGCTGTTTAATCGTCTCG 58.713 55.000 0.00 0.00 0.00 4.04
185 186 1.405121 GGGGCTGTTTAATCGTCTCGT 60.405 52.381 0.00 0.00 0.00 4.18
186 187 1.925185 GGGCTGTTTAATCGTCTCGTC 59.075 52.381 0.00 0.00 0.00 4.20
187 188 2.416972 GGGCTGTTTAATCGTCTCGTCT 60.417 50.000 0.00 0.00 0.00 4.18
188 189 2.599082 GGCTGTTTAATCGTCTCGTCTG 59.401 50.000 0.00 0.00 0.00 3.51
189 190 2.028165 GCTGTTTAATCGTCTCGTCTGC 59.972 50.000 0.00 0.00 0.00 4.26
190 191 3.502920 CTGTTTAATCGTCTCGTCTGCT 58.497 45.455 0.00 0.00 0.00 4.24
191 192 3.242518 TGTTTAATCGTCTCGTCTGCTG 58.757 45.455 0.00 0.00 0.00 4.41
192 193 2.561733 TTAATCGTCTCGTCTGCTGG 57.438 50.000 0.00 0.00 0.00 4.85
193 194 1.746470 TAATCGTCTCGTCTGCTGGA 58.254 50.000 0.00 0.00 0.00 3.86
194 195 0.453793 AATCGTCTCGTCTGCTGGAG 59.546 55.000 0.00 0.00 0.00 3.86
195 196 1.380403 ATCGTCTCGTCTGCTGGAGG 61.380 60.000 0.00 0.00 0.00 4.30
196 197 2.183046 GTCTCGTCTGCTGGAGGC 59.817 66.667 0.00 0.00 42.22 4.70
204 205 2.501128 TGCTGGAGGCGCAGATAC 59.499 61.111 10.83 0.00 45.43 2.24
205 206 2.060383 TGCTGGAGGCGCAGATACT 61.060 57.895 10.83 0.00 45.43 2.12
206 207 0.755327 TGCTGGAGGCGCAGATACTA 60.755 55.000 10.83 0.00 45.43 1.82
207 208 0.038709 GCTGGAGGCGCAGATACTAG 60.039 60.000 10.83 3.73 0.00 2.57
208 209 1.610363 CTGGAGGCGCAGATACTAGA 58.390 55.000 10.83 0.00 0.00 2.43
209 210 1.957177 CTGGAGGCGCAGATACTAGAA 59.043 52.381 10.83 0.00 0.00 2.10
210 211 2.560542 CTGGAGGCGCAGATACTAGAAT 59.439 50.000 10.83 0.00 0.00 2.40
211 212 2.297315 TGGAGGCGCAGATACTAGAATG 59.703 50.000 10.83 0.00 0.00 2.67
212 213 2.297597 GGAGGCGCAGATACTAGAATGT 59.702 50.000 10.83 0.00 0.00 2.71
213 214 3.312828 GAGGCGCAGATACTAGAATGTG 58.687 50.000 10.83 0.00 0.00 3.21
214 215 2.695666 AGGCGCAGATACTAGAATGTGT 59.304 45.455 10.83 0.00 0.00 3.72
215 216 3.053455 GGCGCAGATACTAGAATGTGTC 58.947 50.000 10.83 0.00 0.00 3.67
216 217 3.053455 GCGCAGATACTAGAATGTGTCC 58.947 50.000 0.30 0.00 0.00 4.02
217 218 3.243569 GCGCAGATACTAGAATGTGTCCT 60.244 47.826 0.30 0.00 0.00 3.85
218 219 4.541779 CGCAGATACTAGAATGTGTCCTC 58.458 47.826 0.00 0.00 0.00 3.71
219 220 4.277174 CGCAGATACTAGAATGTGTCCTCT 59.723 45.833 0.00 0.00 0.00 3.69
220 221 5.561919 CGCAGATACTAGAATGTGTCCTCTC 60.562 48.000 0.00 0.00 0.00 3.20
221 222 5.561919 GCAGATACTAGAATGTGTCCTCTCG 60.562 48.000 0.00 0.00 0.00 4.04
222 223 5.760743 CAGATACTAGAATGTGTCCTCTCGA 59.239 44.000 0.00 0.00 0.00 4.04
223 224 5.761234 AGATACTAGAATGTGTCCTCTCGAC 59.239 44.000 0.00 0.00 42.33 4.20
224 225 3.018149 ACTAGAATGTGTCCTCTCGACC 58.982 50.000 0.00 0.00 41.18 4.79
225 226 2.223803 AGAATGTGTCCTCTCGACCT 57.776 50.000 0.00 0.00 41.18 3.85
226 227 3.367646 AGAATGTGTCCTCTCGACCTA 57.632 47.619 0.00 0.00 41.18 3.08
227 228 3.698289 AGAATGTGTCCTCTCGACCTAA 58.302 45.455 0.00 0.00 41.18 2.69
228 229 4.087182 AGAATGTGTCCTCTCGACCTAAA 58.913 43.478 0.00 0.00 41.18 1.85
229 230 4.158764 AGAATGTGTCCTCTCGACCTAAAG 59.841 45.833 0.00 0.00 41.18 1.85
230 231 1.544691 TGTGTCCTCTCGACCTAAAGC 59.455 52.381 0.00 0.00 41.18 3.51
231 232 1.819903 GTGTCCTCTCGACCTAAAGCT 59.180 52.381 0.00 0.00 41.18 3.74
232 233 1.819288 TGTCCTCTCGACCTAAAGCTG 59.181 52.381 0.00 0.00 41.18 4.24
233 234 1.135333 GTCCTCTCGACCTAAAGCTGG 59.865 57.143 0.00 0.00 35.23 4.85
234 235 0.461961 CCTCTCGACCTAAAGCTGGG 59.538 60.000 0.00 0.00 0.00 4.45
235 236 1.187087 CTCTCGACCTAAAGCTGGGT 58.813 55.000 6.05 6.05 39.59 4.51
236 237 0.895530 TCTCGACCTAAAGCTGGGTG 59.104 55.000 10.44 4.65 36.34 4.61
237 238 0.108138 CTCGACCTAAAGCTGGGTGG 60.108 60.000 10.44 9.49 36.34 4.61
238 239 0.543410 TCGACCTAAAGCTGGGTGGA 60.543 55.000 10.44 11.38 38.37 4.02
239 240 0.108138 CGACCTAAAGCTGGGTGGAG 60.108 60.000 10.44 0.39 36.34 3.86
240 241 0.984995 GACCTAAAGCTGGGTGGAGT 59.015 55.000 10.44 0.00 36.34 3.85
241 242 2.185387 GACCTAAAGCTGGGTGGAGTA 58.815 52.381 10.44 0.00 36.34 2.59
242 243 2.168728 GACCTAAAGCTGGGTGGAGTAG 59.831 54.545 10.44 0.00 36.34 2.57
243 244 2.225547 ACCTAAAGCTGGGTGGAGTAGA 60.226 50.000 5.62 0.00 34.53 2.59
244 245 3.041946 CCTAAAGCTGGGTGGAGTAGAT 58.958 50.000 0.00 0.00 0.00 1.98
245 246 3.456277 CCTAAAGCTGGGTGGAGTAGATT 59.544 47.826 0.00 0.00 0.00 2.40
246 247 3.356529 AAAGCTGGGTGGAGTAGATTG 57.643 47.619 0.00 0.00 0.00 2.67
247 248 0.543749 AGCTGGGTGGAGTAGATTGC 59.456 55.000 0.00 0.00 0.00 3.56
248 249 0.811616 GCTGGGTGGAGTAGATTGCG 60.812 60.000 0.00 0.00 0.00 4.85
249 250 0.537188 CTGGGTGGAGTAGATTGCGT 59.463 55.000 0.00 0.00 0.00 5.24
250 251 0.249120 TGGGTGGAGTAGATTGCGTG 59.751 55.000 0.00 0.00 0.00 5.34
251 252 0.462047 GGGTGGAGTAGATTGCGTGG 60.462 60.000 0.00 0.00 0.00 4.94
252 253 0.249398 GGTGGAGTAGATTGCGTGGT 59.751 55.000 0.00 0.00 0.00 4.16
253 254 1.338769 GGTGGAGTAGATTGCGTGGTT 60.339 52.381 0.00 0.00 0.00 3.67
254 255 2.423577 GTGGAGTAGATTGCGTGGTTT 58.576 47.619 0.00 0.00 0.00 3.27
255 256 2.159627 GTGGAGTAGATTGCGTGGTTTG 59.840 50.000 0.00 0.00 0.00 2.93
256 257 2.224426 TGGAGTAGATTGCGTGGTTTGT 60.224 45.455 0.00 0.00 0.00 2.83
257 258 2.415512 GGAGTAGATTGCGTGGTTTGTC 59.584 50.000 0.00 0.00 0.00 3.18
258 259 3.326747 GAGTAGATTGCGTGGTTTGTCT 58.673 45.455 0.00 0.00 0.00 3.41
259 260 3.067106 AGTAGATTGCGTGGTTTGTCTG 58.933 45.455 0.00 0.00 0.00 3.51
260 261 2.254546 AGATTGCGTGGTTTGTCTGA 57.745 45.000 0.00 0.00 0.00 3.27
261 262 2.571212 AGATTGCGTGGTTTGTCTGAA 58.429 42.857 0.00 0.00 0.00 3.02
262 263 2.948979 AGATTGCGTGGTTTGTCTGAAA 59.051 40.909 0.00 0.00 0.00 2.69
263 264 2.842208 TTGCGTGGTTTGTCTGAAAG 57.158 45.000 0.00 0.00 0.00 2.62
264 265 2.031258 TGCGTGGTTTGTCTGAAAGA 57.969 45.000 0.00 0.00 43.69 2.52
280 281 6.959361 TCTGAAAGACATGTTTTCTTACAGC 58.041 36.000 22.52 7.45 38.67 4.40
281 282 6.017109 TCTGAAAGACATGTTTTCTTACAGCC 60.017 38.462 22.52 1.42 38.67 4.85
282 283 4.749245 AAGACATGTTTTCTTACAGCCG 57.251 40.909 0.00 0.00 31.28 5.52
283 284 4.002906 AGACATGTTTTCTTACAGCCGA 57.997 40.909 0.00 0.00 0.00 5.54
284 285 4.579869 AGACATGTTTTCTTACAGCCGAT 58.420 39.130 0.00 0.00 0.00 4.18
285 286 5.003804 AGACATGTTTTCTTACAGCCGATT 58.996 37.500 0.00 0.00 0.00 3.34
286 287 5.473504 AGACATGTTTTCTTACAGCCGATTT 59.526 36.000 0.00 0.00 0.00 2.17
287 288 6.653320 AGACATGTTTTCTTACAGCCGATTTA 59.347 34.615 0.00 0.00 0.00 1.40
288 289 6.608610 ACATGTTTTCTTACAGCCGATTTAC 58.391 36.000 0.00 0.00 0.00 2.01
289 290 6.430000 ACATGTTTTCTTACAGCCGATTTACT 59.570 34.615 0.00 0.00 0.00 2.24
290 291 6.870971 TGTTTTCTTACAGCCGATTTACTT 57.129 33.333 0.00 0.00 0.00 2.24
291 292 7.266922 TGTTTTCTTACAGCCGATTTACTTT 57.733 32.000 0.00 0.00 0.00 2.66
292 293 7.357303 TGTTTTCTTACAGCCGATTTACTTTC 58.643 34.615 0.00 0.00 0.00 2.62
293 294 7.227910 TGTTTTCTTACAGCCGATTTACTTTCT 59.772 33.333 0.00 0.00 0.00 2.52
294 295 7.739498 TTTCTTACAGCCGATTTACTTTCTT 57.261 32.000 0.00 0.00 0.00 2.52
295 296 6.721571 TCTTACAGCCGATTTACTTTCTTG 57.278 37.500 0.00 0.00 0.00 3.02
296 297 5.642063 TCTTACAGCCGATTTACTTTCTTGG 59.358 40.000 0.00 0.00 0.00 3.61
297 298 3.751518 ACAGCCGATTTACTTTCTTGGT 58.248 40.909 0.00 0.00 0.00 3.67
298 299 3.751698 ACAGCCGATTTACTTTCTTGGTC 59.248 43.478 0.00 0.00 0.00 4.02
299 300 3.127030 CAGCCGATTTACTTTCTTGGTCC 59.873 47.826 0.00 0.00 0.00 4.46
300 301 3.078837 GCCGATTTACTTTCTTGGTCCA 58.921 45.455 0.00 0.00 0.00 4.02
301 302 3.694566 GCCGATTTACTTTCTTGGTCCAT 59.305 43.478 0.00 0.00 0.00 3.41
302 303 4.157840 GCCGATTTACTTTCTTGGTCCATT 59.842 41.667 0.00 0.00 0.00 3.16
303 304 5.676331 GCCGATTTACTTTCTTGGTCCATTC 60.676 44.000 0.00 0.00 0.00 2.67
304 305 5.414454 CCGATTTACTTTCTTGGTCCATTCA 59.586 40.000 0.00 0.00 0.00 2.57
305 306 6.403636 CCGATTTACTTTCTTGGTCCATTCAG 60.404 42.308 0.00 0.00 0.00 3.02
306 307 6.371548 CGATTTACTTTCTTGGTCCATTCAGA 59.628 38.462 0.00 0.00 0.00 3.27
307 308 7.413438 CGATTTACTTTCTTGGTCCATTCAGAG 60.413 40.741 0.00 0.00 0.00 3.35
308 309 4.713792 ACTTTCTTGGTCCATTCAGAGT 57.286 40.909 0.00 0.00 0.00 3.24
309 310 4.646572 ACTTTCTTGGTCCATTCAGAGTC 58.353 43.478 0.00 0.00 0.00 3.36
310 311 3.703001 TTCTTGGTCCATTCAGAGTCC 57.297 47.619 0.00 0.00 0.00 3.85
311 312 1.550524 TCTTGGTCCATTCAGAGTCCG 59.449 52.381 0.00 0.00 0.00 4.79
312 313 0.613260 TTGGTCCATTCAGAGTCCGG 59.387 55.000 0.00 0.00 0.00 5.14
313 314 0.544357 TGGTCCATTCAGAGTCCGGT 60.544 55.000 0.00 0.00 0.00 5.28
314 315 1.272816 TGGTCCATTCAGAGTCCGGTA 60.273 52.381 0.00 0.00 0.00 4.02
315 316 2.040178 GGTCCATTCAGAGTCCGGTAT 58.960 52.381 0.00 0.00 0.00 2.73
316 317 2.434702 GGTCCATTCAGAGTCCGGTATT 59.565 50.000 0.00 0.00 0.00 1.89
317 318 3.458189 GTCCATTCAGAGTCCGGTATTG 58.542 50.000 0.00 0.00 0.00 1.90
318 319 3.104512 TCCATTCAGAGTCCGGTATTGT 58.895 45.455 0.00 0.00 0.00 2.71
319 320 4.098960 GTCCATTCAGAGTCCGGTATTGTA 59.901 45.833 0.00 0.00 0.00 2.41
320 321 4.899457 TCCATTCAGAGTCCGGTATTGTAT 59.101 41.667 0.00 0.00 0.00 2.29
321 322 5.365605 TCCATTCAGAGTCCGGTATTGTATT 59.634 40.000 0.00 0.00 0.00 1.89
322 323 5.466728 CCATTCAGAGTCCGGTATTGTATTG 59.533 44.000 0.00 0.00 0.00 1.90
323 324 4.054780 TCAGAGTCCGGTATTGTATTGC 57.945 45.455 0.00 0.00 0.00 3.56
324 325 3.131396 CAGAGTCCGGTATTGTATTGCC 58.869 50.000 0.00 0.00 0.00 4.52
325 326 2.769663 AGAGTCCGGTATTGTATTGCCA 59.230 45.455 0.00 0.00 0.00 4.92
326 327 3.131396 GAGTCCGGTATTGTATTGCCAG 58.869 50.000 0.00 0.00 0.00 4.85
327 328 1.602377 GTCCGGTATTGTATTGCCAGC 59.398 52.381 0.00 0.00 0.00 4.85
328 329 0.951558 CCGGTATTGTATTGCCAGCC 59.048 55.000 0.00 0.00 0.00 4.85
329 330 0.586319 CGGTATTGTATTGCCAGCCG 59.414 55.000 0.00 0.00 0.00 5.52
330 331 1.675552 GGTATTGTATTGCCAGCCGT 58.324 50.000 0.00 0.00 0.00 5.68
331 332 1.333619 GGTATTGTATTGCCAGCCGTG 59.666 52.381 0.00 0.00 0.00 4.94
332 333 2.285083 GTATTGTATTGCCAGCCGTGA 58.715 47.619 0.00 0.00 0.00 4.35
333 334 2.057137 ATTGTATTGCCAGCCGTGAT 57.943 45.000 0.00 0.00 0.00 3.06
334 335 1.093972 TTGTATTGCCAGCCGTGATG 58.906 50.000 0.00 0.00 0.00 3.07
335 336 1.356624 GTATTGCCAGCCGTGATGC 59.643 57.895 0.00 0.00 0.00 3.91
336 337 1.823470 TATTGCCAGCCGTGATGCC 60.823 57.895 0.00 0.00 0.00 4.40
337 338 2.549169 TATTGCCAGCCGTGATGCCA 62.549 55.000 0.00 0.00 0.00 4.92
340 341 2.672651 CCAGCCGTGATGCCACAA 60.673 61.111 0.00 0.00 43.34 3.33
341 342 2.693762 CCAGCCGTGATGCCACAAG 61.694 63.158 0.00 0.00 43.34 3.16
342 343 1.672030 CAGCCGTGATGCCACAAGA 60.672 57.895 0.00 0.00 43.34 3.02
343 344 1.376424 AGCCGTGATGCCACAAGAG 60.376 57.895 0.00 0.00 43.34 2.85
344 345 1.375908 GCCGTGATGCCACAAGAGA 60.376 57.895 0.00 0.00 43.34 3.10
345 346 1.364626 GCCGTGATGCCACAAGAGAG 61.365 60.000 0.00 0.00 43.34 3.20
346 347 1.364626 CCGTGATGCCACAAGAGAGC 61.365 60.000 0.00 0.00 43.34 4.09
347 348 0.390866 CGTGATGCCACAAGAGAGCT 60.391 55.000 0.00 0.00 43.34 4.09
348 349 1.085091 GTGATGCCACAAGAGAGCTG 58.915 55.000 0.00 0.00 42.72 4.24
349 350 0.689055 TGATGCCACAAGAGAGCTGT 59.311 50.000 0.00 0.00 0.00 4.40
350 351 1.338484 TGATGCCACAAGAGAGCTGTC 60.338 52.381 1.81 1.81 0.00 3.51
351 352 0.390866 ATGCCACAAGAGAGCTGTCG 60.391 55.000 5.05 0.00 0.00 4.35
352 353 2.386660 GCCACAAGAGAGCTGTCGC 61.387 63.158 5.05 0.00 0.00 5.19
353 354 1.739562 CCACAAGAGAGCTGTCGCC 60.740 63.158 5.05 0.00 36.60 5.54
354 355 1.005748 CACAAGAGAGCTGTCGCCA 60.006 57.895 5.05 0.00 36.60 5.69
355 356 1.005630 ACAAGAGAGCTGTCGCCAC 60.006 57.895 5.05 0.00 36.60 5.01
356 357 2.091112 CAAGAGAGCTGTCGCCACG 61.091 63.158 5.05 0.00 36.60 4.94
357 358 3.288308 AAGAGAGCTGTCGCCACGG 62.288 63.158 5.05 0.00 36.60 4.94
363 364 2.813908 CTGTCGCCACGGCTAACC 60.814 66.667 6.48 0.00 39.32 2.85
387 388 2.476352 CGTCACAGTCGTTCTGATCGAT 60.476 50.000 13.26 0.00 46.27 3.59
391 392 4.816925 TCACAGTCGTTCTGATCGATATCT 59.183 41.667 13.26 4.44 46.27 1.98
408 409 7.896811 TCGATATCTATGTTTGCTGTCCTAAT 58.103 34.615 0.34 0.00 0.00 1.73
432 433 4.125703 GGACAGTGGAATGATGTCTCATC 58.874 47.826 4.73 3.16 41.34 2.92
446 447 6.327365 TGATGTCTCATCTGCCCTATTTAGAA 59.673 38.462 10.40 0.00 0.00 2.10
448 449 6.763355 TGTCTCATCTGCCCTATTTAGAATC 58.237 40.000 0.00 0.00 0.00 2.52
449 450 6.556495 TGTCTCATCTGCCCTATTTAGAATCT 59.444 38.462 0.00 0.00 0.00 2.40
474 480 9.844790 CTAATTTTGATTGTGCAAGTATTCTGA 57.155 29.630 0.00 0.00 0.00 3.27
479 485 3.769739 TGTGCAAGTATTCTGACCAGT 57.230 42.857 0.00 0.00 0.00 4.00
488 494 6.597832 AGTATTCTGACCAGTATATCAGGC 57.402 41.667 1.66 0.00 42.25 4.85
493 499 5.706447 TCTGACCAGTATATCAGGCTAGTT 58.294 41.667 1.66 0.00 42.25 2.24
494 500 6.136857 TCTGACCAGTATATCAGGCTAGTTT 58.863 40.000 1.66 0.00 42.25 2.66
502 508 9.817809 CAGTATATCAGGCTAGTTTTGAACTTA 57.182 33.333 0.00 0.00 42.81 2.24
513 519 6.609237 AGTTTTGAACTTAGTTTCGTACCC 57.391 37.500 0.00 0.00 39.04 3.69
572 578 6.249192 TCTCATCTAAAGTCTGTCTTGAGGA 58.751 40.000 0.13 0.00 35.76 3.71
607 613 1.615392 GGCAGGTTCAGTTTGAGCATT 59.385 47.619 0.00 0.00 28.47 3.56
631 637 2.880268 CTGAAACAGTCATCACCTGCAA 59.120 45.455 0.00 0.00 35.07 4.08
759 772 1.981256 AGTTGTTTCTGGCAACCGAT 58.019 45.000 4.78 0.00 45.14 4.18
762 775 1.686355 TGTTTCTGGCAACCGATTGT 58.314 45.000 0.00 0.00 38.17 2.71
810 823 2.421424 CCTCAACATTAAGCAGCCACTC 59.579 50.000 0.00 0.00 0.00 3.51
819 832 1.815421 GCAGCCACTCATACCGGTG 60.815 63.158 19.93 1.91 0.00 4.94
844 857 2.548067 CCCACGAGTATGCCACTTATCC 60.548 54.545 0.00 0.00 37.72 2.59
850 863 4.443394 CGAGTATGCCACTTATCCGTTTAC 59.557 45.833 0.00 0.00 37.72 2.01
851 864 5.598769 GAGTATGCCACTTATCCGTTTACT 58.401 41.667 0.00 0.00 37.72 2.24
871 884 0.443869 CTCTGCCGGTTCGAATGTTG 59.556 55.000 1.90 0.00 0.00 3.33
927 948 8.296713 TGACTTAATATCCTCTTGTTTGTTTGC 58.703 33.333 0.00 0.00 0.00 3.68
928 949 8.409358 ACTTAATATCCTCTTGTTTGTTTGCT 57.591 30.769 0.00 0.00 0.00 3.91
929 950 8.860088 ACTTAATATCCTCTTGTTTGTTTGCTT 58.140 29.630 0.00 0.00 0.00 3.91
930 951 9.132521 CTTAATATCCTCTTGTTTGTTTGCTTG 57.867 33.333 0.00 0.00 0.00 4.01
931 952 6.655078 ATATCCTCTTGTTTGTTTGCTTGT 57.345 33.333 0.00 0.00 0.00 3.16
932 953 4.799564 TCCTCTTGTTTGTTTGCTTGTT 57.200 36.364 0.00 0.00 0.00 2.83
933 954 5.146010 TCCTCTTGTTTGTTTGCTTGTTT 57.854 34.783 0.00 0.00 0.00 2.83
934 955 4.928615 TCCTCTTGTTTGTTTGCTTGTTTG 59.071 37.500 0.00 0.00 0.00 2.93
1006 1027 3.711086 TGATTAGCTGCGAAGATGTCTC 58.289 45.455 0.00 0.00 0.00 3.36
1113 1134 2.691409 TCTCCCGGTTTGACATCATC 57.309 50.000 0.00 0.00 0.00 2.92
1275 1296 2.325583 ACCTTGTCTCACGCAAGAAA 57.674 45.000 6.62 0.00 44.29 2.52
1344 1365 2.012673 GGGATGACTGTTGATGCTGTC 58.987 52.381 0.00 0.00 37.68 3.51
1347 1368 1.501169 TGACTGTTGATGCTGTCACG 58.499 50.000 0.00 0.00 40.63 4.35
1611 1632 1.296715 GATGTTCCCTGTGAGCGGT 59.703 57.895 0.00 0.00 0.00 5.68
1662 1683 3.077907 CCCGTGATGTTCCCTGGT 58.922 61.111 0.00 0.00 0.00 4.00
1851 1872 1.145119 GAGTGGGAAGGGGTGAAAGTT 59.855 52.381 0.00 0.00 0.00 2.66
1978 1999 2.416431 GCGCCAAAGAATGCAATCTTCT 60.416 45.455 17.16 6.35 38.69 2.85
2172 2193 0.881118 CGTGTGAGGGGAATTTGTGG 59.119 55.000 0.00 0.00 0.00 4.17
2263 2284 7.596749 ATGATTTACTCCAACTTAGTTGTCG 57.403 36.000 21.63 14.64 41.41 4.35
2264 2285 5.407387 TGATTTACTCCAACTTAGTTGTCGC 59.593 40.000 21.63 5.12 41.41 5.19
2288 2320 0.723981 GTGCTTGCTCATCGGAGTTC 59.276 55.000 0.00 0.00 43.37 3.01
2289 2321 0.610174 TGCTTGCTCATCGGAGTTCT 59.390 50.000 0.00 0.00 43.37 3.01
2290 2322 1.002430 TGCTTGCTCATCGGAGTTCTT 59.998 47.619 0.00 0.00 43.37 2.52
2293 2325 2.099141 TGCTCATCGGAGTTCTTTGG 57.901 50.000 0.00 0.00 43.37 3.28
2296 2328 2.872038 GCTCATCGGAGTTCTTTGGTGT 60.872 50.000 0.00 0.00 43.37 4.16
2297 2329 2.996621 CTCATCGGAGTTCTTTGGTGTC 59.003 50.000 0.00 0.00 36.36 3.67
2298 2330 2.367241 TCATCGGAGTTCTTTGGTGTCA 59.633 45.455 0.00 0.00 0.00 3.58
2299 2331 2.234300 TCGGAGTTCTTTGGTGTCAC 57.766 50.000 0.00 0.00 0.00 3.67
2300 2332 1.760613 TCGGAGTTCTTTGGTGTCACT 59.239 47.619 2.35 0.00 0.00 3.41
2301 2333 2.960384 TCGGAGTTCTTTGGTGTCACTA 59.040 45.455 2.35 0.00 0.00 2.74
2302 2334 3.057734 CGGAGTTCTTTGGTGTCACTAC 58.942 50.000 2.35 0.00 0.00 2.73
2303 2335 3.491964 CGGAGTTCTTTGGTGTCACTACA 60.492 47.826 2.35 0.00 0.00 2.74
2304 2336 4.058817 GGAGTTCTTTGGTGTCACTACAG 58.941 47.826 2.35 0.00 35.91 2.74
2305 2337 4.443034 GGAGTTCTTTGGTGTCACTACAGT 60.443 45.833 2.35 0.00 35.91 3.55
2307 2339 6.229936 AGTTCTTTGGTGTCACTACAGTTA 57.770 37.500 2.35 0.00 35.91 2.24
2308 2340 6.646267 AGTTCTTTGGTGTCACTACAGTTAA 58.354 36.000 2.35 0.00 35.91 2.01
2309 2341 7.280356 AGTTCTTTGGTGTCACTACAGTTAAT 58.720 34.615 2.35 0.00 35.91 1.40
2310 2342 7.773690 AGTTCTTTGGTGTCACTACAGTTAATT 59.226 33.333 2.35 0.00 35.91 1.40
2311 2343 7.490962 TCTTTGGTGTCACTACAGTTAATTG 57.509 36.000 2.35 0.00 35.91 2.32
2312 2344 6.485313 TCTTTGGTGTCACTACAGTTAATTGG 59.515 38.462 2.35 0.00 35.91 3.16
2313 2345 4.647611 TGGTGTCACTACAGTTAATTGGG 58.352 43.478 2.35 0.00 35.91 4.12
2314 2346 4.007659 GGTGTCACTACAGTTAATTGGGG 58.992 47.826 2.35 0.00 35.91 4.96
2315 2347 3.439129 GTGTCACTACAGTTAATTGGGGC 59.561 47.826 2.81 0.00 35.91 5.80
2316 2348 3.014623 GTCACTACAGTTAATTGGGGCC 58.985 50.000 0.00 0.00 0.00 5.80
2317 2349 2.645297 TCACTACAGTTAATTGGGGCCA 59.355 45.455 4.39 0.00 0.00 5.36
2318 2350 3.016736 CACTACAGTTAATTGGGGCCAG 58.983 50.000 4.39 0.00 0.00 4.85
2319 2351 2.916934 ACTACAGTTAATTGGGGCCAGA 59.083 45.455 4.39 0.00 0.00 3.86
2320 2352 2.514458 ACAGTTAATTGGGGCCAGAG 57.486 50.000 4.39 0.00 0.00 3.35
2344 2376 4.943705 GGAGTACATGATTTGCAAGGAAGA 59.056 41.667 0.00 0.00 0.00 2.87
2356 2388 1.002033 CAAGGAAGAGCTGTGTTGCAC 60.002 52.381 0.00 0.00 34.99 4.57
2361 2393 1.968540 GAGCTGTGTTGCACCCTCC 60.969 63.158 0.00 0.00 32.73 4.30
2362 2394 2.113986 GCTGTGTTGCACCCTCCT 59.886 61.111 0.00 0.00 32.73 3.69
2363 2395 1.968540 GCTGTGTTGCACCCTCCTC 60.969 63.158 0.00 0.00 32.73 3.71
2372 2404 1.494721 TGCACCCTCCTCTGTTTTCTT 59.505 47.619 0.00 0.00 0.00 2.52
2373 2405 1.882623 GCACCCTCCTCTGTTTTCTTG 59.117 52.381 0.00 0.00 0.00 3.02
2378 2410 3.406764 CCTCCTCTGTTTTCTTGTCCAG 58.593 50.000 0.00 0.00 0.00 3.86
2390 2422 2.909006 TCTTGTCCAGAGGCATTTCTCT 59.091 45.455 0.00 0.00 44.25 3.10
2467 2499 7.802720 GCAAAATGTATTGATTTGGAAAACACC 59.197 33.333 0.00 0.00 35.21 4.16
2500 2532 9.536558 CTCATGAAAAATGTTATGCAAAATGTG 57.463 29.630 0.00 0.00 0.00 3.21
2509 2541 1.393603 TGCAAAATGTGTTGACCGGA 58.606 45.000 9.46 0.00 0.00 5.14
2564 2596 2.960819 ACCTCTCTTTTCATTCGGTCG 58.039 47.619 0.00 0.00 0.00 4.79
2605 2637 5.279156 CCATGTTCCTTTTCTTTTCTCCCTG 60.279 44.000 0.00 0.00 0.00 4.45
2609 2641 4.470602 TCCTTTTCTTTTCTCCCTGAACC 58.529 43.478 0.00 0.00 33.88 3.62
2611 2643 5.371472 TCCTTTTCTTTTCTCCCTGAACCTA 59.629 40.000 0.00 0.00 33.88 3.08
2613 2645 6.207614 CCTTTTCTTTTCTCCCTGAACCTAAG 59.792 42.308 0.00 0.00 33.88 2.18
2626 2659 5.647658 CCTGAACCTAAGCATTACATTGTGA 59.352 40.000 0.00 0.00 0.00 3.58
2633 2666 7.080099 CCTAAGCATTACATTGTGATACATGC 58.920 38.462 0.00 5.76 29.50 4.06
2647 2680 1.774110 ACATGCCTTGTCAACCACAA 58.226 45.000 0.00 0.00 43.12 3.33
2716 2811 1.922447 ACCCTGCACCCAGATATTTGA 59.078 47.619 0.00 0.00 41.77 2.69
2728 2823 6.267471 ACCCAGATATTTGAAAGTGAAAGCAA 59.733 34.615 0.00 0.00 0.00 3.91
2742 2837 6.514947 AGTGAAAGCAAAACATAGCATTTCA 58.485 32.000 0.00 0.00 36.50 2.69
2753 2848 5.068636 ACATAGCATTTCATCCATGTCTCC 58.931 41.667 0.00 0.00 0.00 3.71
2788 2883 9.973661 TTTTCCCTTTCTTGAGACATTATATGA 57.026 29.630 0.00 0.00 0.00 2.15
2792 2887 9.736414 CCCTTTCTTGAGACATTATATGATGAT 57.264 33.333 13.98 2.59 0.00 2.45
2807 2902 1.453524 GATGATACACGCATGCTCGTC 59.546 52.381 17.13 12.68 41.21 4.20
2817 2912 2.072298 GCATGCTCGTCAGAAACTCTT 58.928 47.619 11.37 0.00 0.00 2.85
2818 2913 2.093467 GCATGCTCGTCAGAAACTCTTC 59.907 50.000 11.37 0.00 0.00 2.87
2830 2926 7.010552 CGTCAGAAACTCTTCTCTTCTTTTTGA 59.989 37.037 0.00 0.00 40.05 2.69
2831 2927 8.835439 GTCAGAAACTCTTCTCTTCTTTTTGAT 58.165 33.333 0.00 0.00 40.05 2.57
2838 2934 9.364989 ACTCTTCTCTTCTTTTTGATAGATTCG 57.635 33.333 0.00 0.00 0.00 3.34
2858 2954 9.268268 AGATTCGTAATGTGTTCTTTTTAGTCA 57.732 29.630 0.00 0.00 0.00 3.41
2865 2967 5.302360 TGTGTTCTTTTTAGTCATAGCCGT 58.698 37.500 0.00 0.00 0.00 5.68
2917 3019 2.808543 CTGGAGTTACAGTGTTCAAGGC 59.191 50.000 0.00 0.00 33.81 4.35
2939 3041 2.108075 TGATCTGGTGGAAAGCAAAGGA 59.892 45.455 0.00 0.00 0.00 3.36
2941 3043 0.961753 CTGGTGGAAAGCAAAGGACC 59.038 55.000 0.00 0.00 0.00 4.46
2942 3044 0.260230 TGGTGGAAAGCAAAGGACCA 59.740 50.000 0.00 0.00 0.00 4.02
2943 3045 1.133199 TGGTGGAAAGCAAAGGACCAT 60.133 47.619 0.00 0.00 33.19 3.55
2944 3046 2.109128 TGGTGGAAAGCAAAGGACCATA 59.891 45.455 0.00 0.00 33.19 2.74
2945 3047 3.161866 GGTGGAAAGCAAAGGACCATAA 58.838 45.455 0.00 0.00 33.19 1.90
2946 3048 3.769300 GGTGGAAAGCAAAGGACCATAAT 59.231 43.478 0.00 0.00 33.19 1.28
2947 3049 4.142160 GGTGGAAAGCAAAGGACCATAATC 60.142 45.833 0.00 0.00 33.19 1.75
2948 3050 4.023291 TGGAAAGCAAAGGACCATAATCC 58.977 43.478 0.00 0.00 39.28 3.01
2949 3051 3.384789 GGAAAGCAAAGGACCATAATCCC 59.615 47.826 0.00 0.00 39.91 3.85
2950 3052 2.755952 AGCAAAGGACCATAATCCCC 57.244 50.000 0.00 0.00 39.91 4.81
2951 3053 2.217776 AGCAAAGGACCATAATCCCCT 58.782 47.619 0.00 0.00 39.91 4.79
2952 3054 3.403322 AGCAAAGGACCATAATCCCCTA 58.597 45.455 0.00 0.00 39.91 3.53
2978 3080 5.310857 ACTTTCAGAAGGAATTCTACACCCT 59.689 40.000 5.23 0.00 37.19 4.34
2993 3095 4.585526 CCTAGCGCCGCGGATGAA 62.586 66.667 33.48 10.14 0.00 2.57
3002 3104 1.226746 CCGCGGATGAAACCCTAATC 58.773 55.000 24.07 0.00 0.00 1.75
3003 3105 1.226746 CGCGGATGAAACCCTAATCC 58.773 55.000 0.00 0.00 37.17 3.01
3019 3121 5.319453 CCTAATCCGATACCAGGTGTAGTA 58.681 45.833 0.76 0.00 31.61 1.82
3096 6493 4.404654 GGCAAAGGCGCGTTCCAG 62.405 66.667 16.62 10.25 42.47 3.86
3107 6504 1.668419 GCGTTCCAGATACAGGCAAT 58.332 50.000 0.00 0.00 0.00 3.56
3138 6535 9.669353 CAAATACTGTATGATAATTGAACTGGC 57.331 33.333 0.22 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.140161 TGAGCGATTAACCGACGGG 59.860 57.895 20.00 0.00 40.11 5.28
1 2 1.143969 GGTGAGCGATTAACCGACGG 61.144 60.000 13.61 13.61 0.00 4.79
2 3 2.285154 GGTGAGCGATTAACCGACG 58.715 57.895 0.00 0.00 0.00 5.12
15 16 0.596083 GATGAGTGATCGGCGGTGAG 60.596 60.000 7.21 0.00 0.00 3.51
16 17 1.319614 TGATGAGTGATCGGCGGTGA 61.320 55.000 7.21 0.00 33.17 4.02
17 18 1.141665 TGATGAGTGATCGGCGGTG 59.858 57.895 7.21 0.00 33.17 4.94
18 19 1.141881 GTGATGAGTGATCGGCGGT 59.858 57.895 7.21 0.00 33.17 5.68
19 20 0.873312 CAGTGATGAGTGATCGGCGG 60.873 60.000 7.21 0.00 33.17 6.13
20 21 0.179127 ACAGTGATGAGTGATCGGCG 60.179 55.000 0.00 0.00 33.17 6.46
21 22 1.284657 CACAGTGATGAGTGATCGGC 58.715 55.000 0.00 0.00 37.97 5.54
22 23 1.284657 GCACAGTGATGAGTGATCGG 58.715 55.000 4.15 0.00 37.97 4.18
23 24 1.134877 AGGCACAGTGATGAGTGATCG 60.135 52.381 4.15 0.00 37.97 3.69
24 25 2.277969 CAGGCACAGTGATGAGTGATC 58.722 52.381 4.15 0.00 37.97 2.92
25 26 1.678123 GCAGGCACAGTGATGAGTGAT 60.678 52.381 4.15 0.00 37.97 3.06
26 27 0.321034 GCAGGCACAGTGATGAGTGA 60.321 55.000 4.15 0.00 37.97 3.41
27 28 1.632948 CGCAGGCACAGTGATGAGTG 61.633 60.000 4.15 0.00 38.74 3.51
28 29 1.375140 CGCAGGCACAGTGATGAGT 60.375 57.895 4.15 0.00 0.00 3.41
29 30 2.104859 CCGCAGGCACAGTGATGAG 61.105 63.158 4.15 3.91 46.14 2.90
30 31 2.046988 CCGCAGGCACAGTGATGA 60.047 61.111 4.15 0.00 46.14 2.92
52 53 4.215742 TAATCGCTCACCGCCGGG 62.216 66.667 8.57 0.00 40.11 5.73
53 54 2.658593 CTAATCGCTCACCGCCGG 60.659 66.667 0.00 0.00 36.73 6.13
54 55 3.330853 GCTAATCGCTCACCGCCG 61.331 66.667 0.00 0.00 36.73 6.46
63 64 2.863137 CAGGACTGAAGAAGCTAATCGC 59.137 50.000 0.00 0.00 39.57 4.58
64 65 3.452474 CCAGGACTGAAGAAGCTAATCG 58.548 50.000 0.00 0.00 0.00 3.34
65 66 3.202097 GCCAGGACTGAAGAAGCTAATC 58.798 50.000 0.00 0.00 0.00 1.75
66 67 2.092699 GGCCAGGACTGAAGAAGCTAAT 60.093 50.000 0.00 0.00 0.00 1.73
67 68 1.279271 GGCCAGGACTGAAGAAGCTAA 59.721 52.381 0.00 0.00 0.00 3.09
68 69 0.905357 GGCCAGGACTGAAGAAGCTA 59.095 55.000 0.00 0.00 0.00 3.32
69 70 0.839853 AGGCCAGGACTGAAGAAGCT 60.840 55.000 5.01 0.00 0.00 3.74
70 71 0.676151 CAGGCCAGGACTGAAGAAGC 60.676 60.000 19.06 0.00 42.14 3.86
71 72 0.979665 TCAGGCCAGGACTGAAGAAG 59.020 55.000 24.25 0.00 45.60 2.85
72 73 3.164024 TCAGGCCAGGACTGAAGAA 57.836 52.632 24.25 0.00 45.60 2.52
73 74 4.975490 TCAGGCCAGGACTGAAGA 57.025 55.556 24.25 0.00 45.60 2.87
76 77 2.607750 GGGTCAGGCCAGGACTGA 60.608 66.667 22.61 22.61 46.50 3.41
77 78 4.087892 CGGGTCAGGCCAGGACTG 62.088 72.222 17.61 17.61 40.64 3.51
78 79 4.640690 ACGGGTCAGGCCAGGACT 62.641 66.667 22.23 0.00 39.65 3.85
79 80 4.394712 CACGGGTCAGGCCAGGAC 62.395 72.222 16.85 16.85 39.65 3.85
80 81 4.954118 ACACGGGTCAGGCCAGGA 62.954 66.667 5.01 0.00 39.65 3.86
81 82 3.953775 AACACGGGTCAGGCCAGG 61.954 66.667 5.01 0.00 39.65 4.45
82 83 2.669569 CAACACGGGTCAGGCCAG 60.670 66.667 5.01 0.00 39.65 4.85
83 84 4.263572 CCAACACGGGTCAGGCCA 62.264 66.667 5.01 0.00 39.65 5.36
84 85 3.785122 AACCAACACGGGTCAGGCC 62.785 63.158 9.02 0.00 41.32 5.19
85 86 1.826487 AAACCAACACGGGTCAGGC 60.826 57.895 9.02 0.00 41.32 4.85
86 87 1.452145 CCAAACCAACACGGGTCAGG 61.452 60.000 7.64 7.64 41.32 3.86
87 88 1.452145 CCCAAACCAACACGGGTCAG 61.452 60.000 0.00 0.00 41.32 3.51
88 89 1.454111 CCCAAACCAACACGGGTCA 60.454 57.895 0.00 0.00 41.32 4.02
89 90 2.197605 CCCCAAACCAACACGGGTC 61.198 63.158 0.00 0.00 41.32 4.46
90 91 2.123640 CCCCAAACCAACACGGGT 60.124 61.111 0.00 0.00 45.04 5.28
91 92 2.723464 ATCCCCCAAACCAACACGGG 62.723 60.000 0.00 0.00 40.22 5.28
92 93 1.228737 ATCCCCCAAACCAACACGG 60.229 57.895 0.00 0.00 42.50 4.94
93 94 0.251165 AGATCCCCCAAACCAACACG 60.251 55.000 0.00 0.00 0.00 4.49
94 95 1.075536 AGAGATCCCCCAAACCAACAC 59.924 52.381 0.00 0.00 0.00 3.32
95 96 1.455822 AGAGATCCCCCAAACCAACA 58.544 50.000 0.00 0.00 0.00 3.33
96 97 2.576648 ACTAGAGATCCCCCAAACCAAC 59.423 50.000 0.00 0.00 0.00 3.77
97 98 2.844348 GACTAGAGATCCCCCAAACCAA 59.156 50.000 0.00 0.00 0.00 3.67
98 99 2.478292 GACTAGAGATCCCCCAAACCA 58.522 52.381 0.00 0.00 0.00 3.67
99 100 1.769465 GGACTAGAGATCCCCCAAACC 59.231 57.143 0.00 0.00 0.00 3.27
100 101 1.413077 CGGACTAGAGATCCCCCAAAC 59.587 57.143 0.00 0.00 31.99 2.93
101 102 1.289830 TCGGACTAGAGATCCCCCAAA 59.710 52.381 0.00 0.00 31.99 3.28
102 103 0.931468 TCGGACTAGAGATCCCCCAA 59.069 55.000 0.00 0.00 31.99 4.12
103 104 0.478942 CTCGGACTAGAGATCCCCCA 59.521 60.000 0.00 0.00 40.57 4.96
104 105 0.479378 ACTCGGACTAGAGATCCCCC 59.521 60.000 0.00 0.00 40.57 5.40
105 106 1.143277 TCACTCGGACTAGAGATCCCC 59.857 57.143 0.00 0.00 40.57 4.81
106 107 2.158726 ACTCACTCGGACTAGAGATCCC 60.159 54.545 0.00 0.00 40.57 3.85
107 108 2.875933 CACTCACTCGGACTAGAGATCC 59.124 54.545 0.00 0.00 40.57 3.36
108 109 3.558418 GTCACTCACTCGGACTAGAGATC 59.442 52.174 0.00 0.00 40.57 2.75
109 110 3.537580 GTCACTCACTCGGACTAGAGAT 58.462 50.000 0.00 0.00 40.57 2.75
110 111 2.354906 GGTCACTCACTCGGACTAGAGA 60.355 54.545 0.00 0.00 40.57 3.10
111 112 2.011222 GGTCACTCACTCGGACTAGAG 58.989 57.143 0.00 0.00 43.56 2.43
112 113 1.675116 CGGTCACTCACTCGGACTAGA 60.675 57.143 0.00 0.00 0.00 2.43
113 114 0.727970 CGGTCACTCACTCGGACTAG 59.272 60.000 0.00 0.00 0.00 2.57
114 115 0.322648 TCGGTCACTCACTCGGACTA 59.677 55.000 0.00 0.00 0.00 2.59
115 116 0.322636 ATCGGTCACTCACTCGGACT 60.323 55.000 0.00 0.00 0.00 3.85
116 117 0.526662 AATCGGTCACTCACTCGGAC 59.473 55.000 0.00 0.00 0.00 4.79
117 118 0.809385 GAATCGGTCACTCACTCGGA 59.191 55.000 0.00 0.00 0.00 4.55
118 119 0.523546 CGAATCGGTCACTCACTCGG 60.524 60.000 0.00 0.00 0.00 4.63
119 120 0.523546 CCGAATCGGTCACTCACTCG 60.524 60.000 14.46 0.00 42.73 4.18
120 121 0.179134 CCCGAATCGGTCACTCACTC 60.179 60.000 21.12 0.00 46.80 3.51
121 122 0.898789 ACCCGAATCGGTCACTCACT 60.899 55.000 21.12 0.00 46.80 3.41
122 123 1.590147 ACCCGAATCGGTCACTCAC 59.410 57.895 21.12 0.00 46.80 3.51
123 124 4.107029 ACCCGAATCGGTCACTCA 57.893 55.556 21.12 0.00 46.80 3.41
128 129 3.834799 AGGCGACCCGAATCGGTC 61.835 66.667 21.12 15.91 46.80 4.79
129 130 4.143333 CAGGCGACCCGAATCGGT 62.143 66.667 21.12 8.69 46.80 4.69
131 132 2.125673 AACAGGCGACCCGAATCG 60.126 61.111 0.00 0.00 45.09 3.34
132 133 1.084370 CAGAACAGGCGACCCGAATC 61.084 60.000 0.00 0.00 35.76 2.52
133 134 1.079127 CAGAACAGGCGACCCGAAT 60.079 57.895 0.00 0.00 35.76 3.34
134 135 2.342279 CAGAACAGGCGACCCGAA 59.658 61.111 0.00 0.00 35.76 4.30
135 136 2.915659 ACAGAACAGGCGACCCGA 60.916 61.111 0.00 0.00 35.76 5.14
136 137 2.507110 ATCACAGAACAGGCGACCCG 62.507 60.000 0.00 0.00 35.76 5.28
137 138 0.741221 GATCACAGAACAGGCGACCC 60.741 60.000 0.00 0.00 0.00 4.46
138 139 0.741221 GGATCACAGAACAGGCGACC 60.741 60.000 0.00 0.00 0.00 4.79
139 140 0.741221 GGGATCACAGAACAGGCGAC 60.741 60.000 0.00 0.00 0.00 5.19
140 141 1.191489 TGGGATCACAGAACAGGCGA 61.191 55.000 0.00 0.00 0.00 5.54
141 142 1.021390 GTGGGATCACAGAACAGGCG 61.021 60.000 0.00 0.00 43.13 5.52
142 143 2.859992 GTGGGATCACAGAACAGGC 58.140 57.895 0.00 0.00 43.13 4.85
158 159 1.582610 ATTAAACAGCCCCGCGTGTG 61.583 55.000 4.92 0.00 0.00 3.82
159 160 1.302993 ATTAAACAGCCCCGCGTGT 60.303 52.632 4.92 0.00 0.00 4.49
160 161 1.427819 GATTAAACAGCCCCGCGTG 59.572 57.895 4.92 0.00 0.00 5.34
161 162 2.104253 CGATTAAACAGCCCCGCGT 61.104 57.895 4.92 0.00 0.00 6.01
162 163 2.032185 GACGATTAAACAGCCCCGCG 62.032 60.000 0.00 0.00 0.00 6.46
163 164 0.743345 AGACGATTAAACAGCCCCGC 60.743 55.000 0.00 0.00 0.00 6.13
164 165 1.287425 GAGACGATTAAACAGCCCCG 58.713 55.000 0.00 0.00 0.00 5.73
165 166 1.287425 CGAGACGATTAAACAGCCCC 58.713 55.000 0.00 0.00 0.00 5.80
166 167 1.925185 GACGAGACGATTAAACAGCCC 59.075 52.381 0.00 0.00 0.00 5.19
167 168 2.599082 CAGACGAGACGATTAAACAGCC 59.401 50.000 0.00 0.00 0.00 4.85
168 169 2.028165 GCAGACGAGACGATTAAACAGC 59.972 50.000 0.00 0.00 0.00 4.40
169 170 3.301906 CAGCAGACGAGACGATTAAACAG 59.698 47.826 0.00 0.00 0.00 3.16
170 171 3.242518 CAGCAGACGAGACGATTAAACA 58.757 45.455 0.00 0.00 0.00 2.83
171 172 2.599082 CCAGCAGACGAGACGATTAAAC 59.401 50.000 0.00 0.00 0.00 2.01
172 173 2.490509 TCCAGCAGACGAGACGATTAAA 59.509 45.455 0.00 0.00 0.00 1.52
173 174 2.089201 TCCAGCAGACGAGACGATTAA 58.911 47.619 0.00 0.00 0.00 1.40
174 175 1.671328 CTCCAGCAGACGAGACGATTA 59.329 52.381 0.00 0.00 0.00 1.75
175 176 0.453793 CTCCAGCAGACGAGACGATT 59.546 55.000 0.00 0.00 0.00 3.34
176 177 1.380403 CCTCCAGCAGACGAGACGAT 61.380 60.000 0.00 0.00 0.00 3.73
177 178 2.041115 CCTCCAGCAGACGAGACGA 61.041 63.158 0.00 0.00 0.00 4.20
178 179 2.487428 CCTCCAGCAGACGAGACG 59.513 66.667 0.00 0.00 0.00 4.18
179 180 2.183046 GCCTCCAGCAGACGAGAC 59.817 66.667 0.00 0.00 42.97 3.36
180 181 3.443925 CGCCTCCAGCAGACGAGA 61.444 66.667 0.00 0.00 44.04 4.04
187 188 0.755327 TAGTATCTGCGCCTCCAGCA 60.755 55.000 4.18 0.00 44.04 4.41
188 189 0.038709 CTAGTATCTGCGCCTCCAGC 60.039 60.000 4.18 0.00 38.52 4.85
189 190 1.610363 TCTAGTATCTGCGCCTCCAG 58.390 55.000 4.18 0.00 0.00 3.86
190 191 2.067365 TTCTAGTATCTGCGCCTCCA 57.933 50.000 4.18 0.00 0.00 3.86
191 192 2.297597 ACATTCTAGTATCTGCGCCTCC 59.702 50.000 4.18 0.00 0.00 4.30
192 193 3.243569 ACACATTCTAGTATCTGCGCCTC 60.244 47.826 4.18 0.00 0.00 4.70
193 194 2.695666 ACACATTCTAGTATCTGCGCCT 59.304 45.455 4.18 0.00 0.00 5.52
194 195 3.053455 GACACATTCTAGTATCTGCGCC 58.947 50.000 4.18 0.00 0.00 6.53
195 196 3.053455 GGACACATTCTAGTATCTGCGC 58.947 50.000 0.00 0.00 0.00 6.09
196 197 4.277174 AGAGGACACATTCTAGTATCTGCG 59.723 45.833 0.00 0.00 0.00 5.18
197 198 5.561919 CGAGAGGACACATTCTAGTATCTGC 60.562 48.000 0.00 0.00 0.00 4.26
198 199 5.760743 TCGAGAGGACACATTCTAGTATCTG 59.239 44.000 0.00 0.00 0.00 2.90
199 200 5.761234 GTCGAGAGGACACATTCTAGTATCT 59.239 44.000 0.00 0.00 45.36 1.98
200 201 5.992729 GTCGAGAGGACACATTCTAGTATC 58.007 45.833 0.00 0.00 45.36 2.24
213 214 1.135333 CCAGCTTTAGGTCGAGAGGAC 59.865 57.143 0.00 0.00 45.31 3.85
214 215 1.475403 CCAGCTTTAGGTCGAGAGGA 58.525 55.000 0.00 0.00 0.00 3.71
215 216 0.461961 CCCAGCTTTAGGTCGAGAGG 59.538 60.000 0.00 0.00 0.00 3.69
216 217 1.134965 CACCCAGCTTTAGGTCGAGAG 60.135 57.143 0.00 0.00 32.72 3.20
217 218 0.895530 CACCCAGCTTTAGGTCGAGA 59.104 55.000 0.00 0.00 32.72 4.04
218 219 0.108138 CCACCCAGCTTTAGGTCGAG 60.108 60.000 0.00 0.00 32.72 4.04
219 220 0.543410 TCCACCCAGCTTTAGGTCGA 60.543 55.000 0.00 0.00 32.72 4.20
220 221 0.108138 CTCCACCCAGCTTTAGGTCG 60.108 60.000 0.00 0.00 32.72 4.79
221 222 0.984995 ACTCCACCCAGCTTTAGGTC 59.015 55.000 0.00 0.00 32.72 3.85
222 223 2.188817 CTACTCCACCCAGCTTTAGGT 58.811 52.381 0.00 0.00 36.58 3.08
223 224 2.467880 TCTACTCCACCCAGCTTTAGG 58.532 52.381 0.00 0.00 0.00 2.69
224 225 4.446371 CAATCTACTCCACCCAGCTTTAG 58.554 47.826 0.00 0.00 0.00 1.85
225 226 3.370527 GCAATCTACTCCACCCAGCTTTA 60.371 47.826 0.00 0.00 0.00 1.85
226 227 2.619074 GCAATCTACTCCACCCAGCTTT 60.619 50.000 0.00 0.00 0.00 3.51
227 228 1.065126 GCAATCTACTCCACCCAGCTT 60.065 52.381 0.00 0.00 0.00 3.74
228 229 0.543749 GCAATCTACTCCACCCAGCT 59.456 55.000 0.00 0.00 0.00 4.24
229 230 0.811616 CGCAATCTACTCCACCCAGC 60.812 60.000 0.00 0.00 0.00 4.85
230 231 0.537188 ACGCAATCTACTCCACCCAG 59.463 55.000 0.00 0.00 0.00 4.45
231 232 0.249120 CACGCAATCTACTCCACCCA 59.751 55.000 0.00 0.00 0.00 4.51
232 233 0.462047 CCACGCAATCTACTCCACCC 60.462 60.000 0.00 0.00 0.00 4.61
233 234 0.249398 ACCACGCAATCTACTCCACC 59.751 55.000 0.00 0.00 0.00 4.61
234 235 2.094762 AACCACGCAATCTACTCCAC 57.905 50.000 0.00 0.00 0.00 4.02
235 236 2.224426 ACAAACCACGCAATCTACTCCA 60.224 45.455 0.00 0.00 0.00 3.86
236 237 2.415512 GACAAACCACGCAATCTACTCC 59.584 50.000 0.00 0.00 0.00 3.85
237 238 3.123621 CAGACAAACCACGCAATCTACTC 59.876 47.826 0.00 0.00 0.00 2.59
238 239 3.067106 CAGACAAACCACGCAATCTACT 58.933 45.455 0.00 0.00 0.00 2.57
239 240 3.064207 TCAGACAAACCACGCAATCTAC 58.936 45.455 0.00 0.00 0.00 2.59
240 241 3.394674 TCAGACAAACCACGCAATCTA 57.605 42.857 0.00 0.00 0.00 1.98
241 242 2.254546 TCAGACAAACCACGCAATCT 57.745 45.000 0.00 0.00 0.00 2.40
242 243 3.003275 TCTTTCAGACAAACCACGCAATC 59.997 43.478 0.00 0.00 0.00 2.67
243 244 2.948979 TCTTTCAGACAAACCACGCAAT 59.051 40.909 0.00 0.00 0.00 3.56
244 245 2.096819 GTCTTTCAGACAAACCACGCAA 59.903 45.455 0.00 0.00 44.45 4.85
245 246 1.668751 GTCTTTCAGACAAACCACGCA 59.331 47.619 0.00 0.00 44.45 5.24
246 247 2.384899 GTCTTTCAGACAAACCACGC 57.615 50.000 0.00 0.00 44.45 5.34
255 256 6.853362 GCTGTAAGAAAACATGTCTTTCAGAC 59.147 38.462 24.33 20.94 45.84 3.51
256 257 6.017109 GGCTGTAAGAAAACATGTCTTTCAGA 60.017 38.462 24.33 14.41 45.84 3.27
257 258 6.145535 GGCTGTAAGAAAACATGTCTTTCAG 58.854 40.000 23.38 21.52 45.77 3.02
258 259 5.277779 CGGCTGTAAGAAAACATGTCTTTCA 60.278 40.000 23.38 15.41 36.69 2.69
259 260 5.049680 TCGGCTGTAAGAAAACATGTCTTTC 60.050 40.000 18.14 18.14 36.69 2.62
260 261 4.819630 TCGGCTGTAAGAAAACATGTCTTT 59.180 37.500 0.00 2.19 36.69 2.52
261 262 4.385825 TCGGCTGTAAGAAAACATGTCTT 58.614 39.130 0.00 0.69 38.80 3.01
262 263 4.002906 TCGGCTGTAAGAAAACATGTCT 57.997 40.909 0.00 0.00 34.07 3.41
263 264 4.946784 ATCGGCTGTAAGAAAACATGTC 57.053 40.909 0.00 0.00 34.07 3.06
264 265 5.705609 AAATCGGCTGTAAGAAAACATGT 57.294 34.783 0.00 0.00 34.07 3.21
265 266 6.842163 AGTAAATCGGCTGTAAGAAAACATG 58.158 36.000 0.00 0.00 34.07 3.21
266 267 7.448748 AAGTAAATCGGCTGTAAGAAAACAT 57.551 32.000 0.00 0.00 34.07 2.71
267 268 6.870971 AAGTAAATCGGCTGTAAGAAAACA 57.129 33.333 0.00 0.00 34.07 2.83
268 269 7.582352 AGAAAGTAAATCGGCTGTAAGAAAAC 58.418 34.615 0.00 0.00 34.07 2.43
269 270 7.739498 AGAAAGTAAATCGGCTGTAAGAAAA 57.261 32.000 0.00 0.00 34.07 2.29
270 271 7.308348 CCAAGAAAGTAAATCGGCTGTAAGAAA 60.308 37.037 0.00 0.00 34.07 2.52
271 272 6.148811 CCAAGAAAGTAAATCGGCTGTAAGAA 59.851 38.462 0.00 0.00 34.07 2.52
272 273 5.642063 CCAAGAAAGTAAATCGGCTGTAAGA 59.358 40.000 0.00 0.00 34.07 2.10
273 274 5.411669 ACCAAGAAAGTAAATCGGCTGTAAG 59.588 40.000 0.00 0.00 0.00 2.34
274 275 5.310451 ACCAAGAAAGTAAATCGGCTGTAA 58.690 37.500 0.00 0.00 0.00 2.41
275 276 4.901868 ACCAAGAAAGTAAATCGGCTGTA 58.098 39.130 0.00 0.00 0.00 2.74
276 277 3.751518 ACCAAGAAAGTAAATCGGCTGT 58.248 40.909 0.00 0.00 0.00 4.40
277 278 3.127030 GGACCAAGAAAGTAAATCGGCTG 59.873 47.826 0.00 0.00 0.00 4.85
278 279 3.244770 TGGACCAAGAAAGTAAATCGGCT 60.245 43.478 0.00 0.00 0.00 5.52
279 280 3.078837 TGGACCAAGAAAGTAAATCGGC 58.921 45.455 0.00 0.00 0.00 5.54
280 281 5.414454 TGAATGGACCAAGAAAGTAAATCGG 59.586 40.000 0.00 0.00 0.00 4.18
281 282 6.371548 TCTGAATGGACCAAGAAAGTAAATCG 59.628 38.462 0.00 0.00 0.00 3.34
282 283 7.391833 ACTCTGAATGGACCAAGAAAGTAAATC 59.608 37.037 0.00 0.00 0.00 2.17
283 284 7.234355 ACTCTGAATGGACCAAGAAAGTAAAT 58.766 34.615 0.00 0.00 0.00 1.40
284 285 6.601332 ACTCTGAATGGACCAAGAAAGTAAA 58.399 36.000 0.00 0.00 0.00 2.01
285 286 6.187727 ACTCTGAATGGACCAAGAAAGTAA 57.812 37.500 0.00 0.00 0.00 2.24
286 287 5.280011 GGACTCTGAATGGACCAAGAAAGTA 60.280 44.000 0.00 0.00 0.00 2.24
287 288 4.505742 GGACTCTGAATGGACCAAGAAAGT 60.506 45.833 0.00 0.00 0.00 2.66
288 289 4.006319 GGACTCTGAATGGACCAAGAAAG 58.994 47.826 0.00 0.00 0.00 2.62
289 290 3.557054 CGGACTCTGAATGGACCAAGAAA 60.557 47.826 0.00 0.00 0.00 2.52
290 291 2.028112 CGGACTCTGAATGGACCAAGAA 60.028 50.000 0.00 0.00 0.00 2.52
291 292 1.550524 CGGACTCTGAATGGACCAAGA 59.449 52.381 0.00 0.00 0.00 3.02
292 293 1.406069 CCGGACTCTGAATGGACCAAG 60.406 57.143 0.00 0.00 0.00 3.61
293 294 0.613260 CCGGACTCTGAATGGACCAA 59.387 55.000 0.00 0.00 0.00 3.67
294 295 0.544357 ACCGGACTCTGAATGGACCA 60.544 55.000 9.46 0.00 0.00 4.02
295 296 1.481871 TACCGGACTCTGAATGGACC 58.518 55.000 9.46 0.00 0.00 4.46
296 297 3.118738 ACAATACCGGACTCTGAATGGAC 60.119 47.826 9.46 0.00 0.00 4.02
297 298 3.104512 ACAATACCGGACTCTGAATGGA 58.895 45.455 9.46 0.00 0.00 3.41
298 299 3.543680 ACAATACCGGACTCTGAATGG 57.456 47.619 9.46 0.00 0.00 3.16
299 300 5.050091 GCAATACAATACCGGACTCTGAATG 60.050 44.000 9.46 0.00 0.00 2.67
300 301 5.057149 GCAATACAATACCGGACTCTGAAT 58.943 41.667 9.46 0.00 0.00 2.57
301 302 4.439057 GCAATACAATACCGGACTCTGAA 58.561 43.478 9.46 0.00 0.00 3.02
302 303 3.181469 GGCAATACAATACCGGACTCTGA 60.181 47.826 9.46 0.00 0.00 3.27
303 304 3.131396 GGCAATACAATACCGGACTCTG 58.869 50.000 9.46 1.83 0.00 3.35
304 305 2.769663 TGGCAATACAATACCGGACTCT 59.230 45.455 9.46 0.00 0.00 3.24
305 306 3.131396 CTGGCAATACAATACCGGACTC 58.869 50.000 9.46 0.00 0.00 3.36
306 307 2.745152 GCTGGCAATACAATACCGGACT 60.745 50.000 9.46 0.00 0.00 3.85
307 308 1.602377 GCTGGCAATACAATACCGGAC 59.398 52.381 9.46 0.00 0.00 4.79
308 309 1.476110 GGCTGGCAATACAATACCGGA 60.476 52.381 9.46 0.00 0.00 5.14
309 310 0.951558 GGCTGGCAATACAATACCGG 59.048 55.000 0.00 0.00 0.00 5.28
310 311 0.586319 CGGCTGGCAATACAATACCG 59.414 55.000 1.08 0.00 0.00 4.02
311 312 1.333619 CACGGCTGGCAATACAATACC 59.666 52.381 1.08 0.00 0.00 2.73
312 313 2.285083 TCACGGCTGGCAATACAATAC 58.715 47.619 1.08 0.00 0.00 1.89
313 314 2.700722 TCACGGCTGGCAATACAATA 57.299 45.000 1.08 0.00 0.00 1.90
314 315 1.677576 CATCACGGCTGGCAATACAAT 59.322 47.619 1.08 0.00 0.00 2.71
315 316 1.093972 CATCACGGCTGGCAATACAA 58.906 50.000 1.08 0.00 0.00 2.41
316 317 1.375853 GCATCACGGCTGGCAATACA 61.376 55.000 1.08 0.00 0.00 2.29
317 318 1.356624 GCATCACGGCTGGCAATAC 59.643 57.895 1.08 0.00 0.00 1.89
318 319 1.823470 GGCATCACGGCTGGCAATA 60.823 57.895 1.08 0.00 38.90 1.90
319 320 3.142838 GGCATCACGGCTGGCAAT 61.143 61.111 1.08 0.00 38.90 3.56
320 321 4.657408 TGGCATCACGGCTGGCAA 62.657 61.111 7.71 0.00 45.00 4.52
323 324 2.672651 TTGTGGCATCACGGCTGG 60.673 61.111 0.00 0.00 46.42 4.85
324 325 1.642037 CTCTTGTGGCATCACGGCTG 61.642 60.000 0.00 0.00 46.42 4.85
325 326 1.376424 CTCTTGTGGCATCACGGCT 60.376 57.895 0.00 0.00 46.42 5.52
326 327 1.364626 CTCTCTTGTGGCATCACGGC 61.365 60.000 0.00 0.00 46.42 5.68
327 328 1.364626 GCTCTCTTGTGGCATCACGG 61.365 60.000 0.00 0.00 46.42 4.94
328 329 0.390866 AGCTCTCTTGTGGCATCACG 60.391 55.000 0.00 0.00 46.42 4.35
329 330 1.085091 CAGCTCTCTTGTGGCATCAC 58.915 55.000 0.00 0.00 43.87 3.06
330 331 0.689055 ACAGCTCTCTTGTGGCATCA 59.311 50.000 0.00 0.00 0.00 3.07
331 332 1.367659 GACAGCTCTCTTGTGGCATC 58.632 55.000 0.00 0.00 0.00 3.91
332 333 0.390866 CGACAGCTCTCTTGTGGCAT 60.391 55.000 0.00 0.00 0.00 4.40
333 334 1.005748 CGACAGCTCTCTTGTGGCA 60.006 57.895 0.00 0.00 0.00 4.92
334 335 2.386660 GCGACAGCTCTCTTGTGGC 61.387 63.158 0.00 0.00 41.01 5.01
335 336 1.739562 GGCGACAGCTCTCTTGTGG 60.740 63.158 0.00 0.00 44.37 4.17
336 337 1.005748 TGGCGACAGCTCTCTTGTG 60.006 57.895 0.00 0.00 44.37 3.33
337 338 1.005630 GTGGCGACAGCTCTCTTGT 60.006 57.895 0.00 0.00 44.46 3.16
338 339 2.091112 CGTGGCGACAGCTCTCTTG 61.091 63.158 0.00 0.00 44.46 3.02
339 340 2.259818 CGTGGCGACAGCTCTCTT 59.740 61.111 0.00 0.00 44.46 2.85
340 341 3.753434 CCGTGGCGACAGCTCTCT 61.753 66.667 0.00 0.00 44.46 3.10
356 357 0.731855 GACTGTGACGACGGTTAGCC 60.732 60.000 0.00 0.00 42.11 3.93
357 358 1.063951 CGACTGTGACGACGGTTAGC 61.064 60.000 0.00 0.00 42.11 3.09
358 359 0.236711 ACGACTGTGACGACGGTTAG 59.763 55.000 0.00 0.00 42.11 2.34
359 360 0.662619 AACGACTGTGACGACGGTTA 59.337 50.000 0.00 0.00 42.11 2.85
360 361 0.593263 GAACGACTGTGACGACGGTT 60.593 55.000 0.00 0.00 42.11 4.44
361 362 1.009222 GAACGACTGTGACGACGGT 60.009 57.895 0.00 0.00 44.92 4.83
362 363 0.997226 CAGAACGACTGTGACGACGG 60.997 60.000 0.00 0.00 41.30 4.79
363 364 0.041576 TCAGAACGACTGTGACGACG 60.042 55.000 12.23 0.00 45.86 5.12
364 365 2.243407 GATCAGAACGACTGTGACGAC 58.757 52.381 12.23 0.00 45.86 4.34
365 366 1.136057 CGATCAGAACGACTGTGACGA 60.136 52.381 12.23 0.00 45.86 4.20
366 367 1.136057 TCGATCAGAACGACTGTGACG 60.136 52.381 0.00 14.18 45.86 4.35
367 368 2.613730 TCGATCAGAACGACTGTGAC 57.386 50.000 0.00 6.35 45.86 3.67
387 388 6.328934 TCCCATTAGGACAGCAAACATAGATA 59.671 38.462 0.00 0.00 40.93 1.98
391 392 4.853468 TCCCATTAGGACAGCAAACATA 57.147 40.909 0.00 0.00 40.93 2.29
408 409 2.237143 GAGACATCATTCCACTGTCCCA 59.763 50.000 0.00 0.00 40.08 4.37
448 449 9.844790 TCAGAATACTTGCACAATCAAAATTAG 57.155 29.630 0.00 0.00 0.00 1.73
449 450 9.624697 GTCAGAATACTTGCACAATCAAAATTA 57.375 29.630 0.00 0.00 0.00 1.40
458 464 4.085357 ACTGGTCAGAATACTTGCACAA 57.915 40.909 4.84 0.00 0.00 3.33
462 468 6.870965 CCTGATATACTGGTCAGAATACTTGC 59.129 42.308 4.84 0.00 43.50 4.01
468 474 6.318913 ACTAGCCTGATATACTGGTCAGAAT 58.681 40.000 4.84 0.00 43.50 2.40
474 480 6.808321 TCAAAACTAGCCTGATATACTGGT 57.192 37.500 0.00 0.00 39.38 4.00
488 494 7.358683 CGGGTACGAAACTAAGTTCAAAACTAG 60.359 40.741 0.00 0.00 41.36 2.57
493 499 4.057432 CCGGGTACGAAACTAAGTTCAAA 58.943 43.478 0.00 0.00 44.60 2.69
494 500 3.652274 CCGGGTACGAAACTAAGTTCAA 58.348 45.455 0.00 0.00 44.60 2.69
502 508 2.363359 CCTAATAGCCGGGTACGAAACT 59.637 50.000 17.09 0.00 44.60 2.66
503 509 2.546584 CCCTAATAGCCGGGTACGAAAC 60.547 54.545 17.09 0.00 44.60 2.78
513 519 6.662865 ATCATCTGATATCCCTAATAGCCG 57.337 41.667 0.00 0.00 32.01 5.52
527 533 9.976776 ATGAGATAAATAAGGCAATCATCTGAT 57.023 29.630 0.00 0.00 36.07 2.90
572 578 0.535335 CTGCCAGCCAGAAATTGCAT 59.465 50.000 0.00 0.00 44.64 3.96
607 613 4.065088 GCAGGTGATGACTGTTTCAGTTA 58.935 43.478 3.91 0.61 45.44 2.24
651 661 7.093354 GTCAGTCATGAGAGATCTAACAACAA 58.907 38.462 0.00 0.00 35.66 2.83
759 772 4.259356 CAAGCAAGATGATCTCCTCACAA 58.741 43.478 0.00 0.00 36.48 3.33
762 775 4.019950 TGAACAAGCAAGATGATCTCCTCA 60.020 41.667 0.00 0.00 38.53 3.86
810 823 1.813753 CGTGGGAAGCACCGGTATG 60.814 63.158 6.87 0.00 40.11 2.39
819 832 1.090052 GTGGCATACTCGTGGGAAGC 61.090 60.000 0.00 0.00 0.00 3.86
844 857 1.347320 GAACCGGCAGAGAGTAAACG 58.653 55.000 0.00 0.00 0.00 3.60
850 863 0.108615 ACATTCGAACCGGCAGAGAG 60.109 55.000 0.00 0.00 0.00 3.20
851 864 0.320374 AACATTCGAACCGGCAGAGA 59.680 50.000 0.00 0.00 0.00 3.10
871 884 5.106396 GCCAGCATCCTTATGACATAACATC 60.106 44.000 3.68 0.00 34.84 3.06
927 948 3.632145 AGAGCACCCTACAAACAAACAAG 59.368 43.478 0.00 0.00 0.00 3.16
928 949 3.380004 CAGAGCACCCTACAAACAAACAA 59.620 43.478 0.00 0.00 0.00 2.83
929 950 2.948979 CAGAGCACCCTACAAACAAACA 59.051 45.455 0.00 0.00 0.00 2.83
930 951 3.211045 TCAGAGCACCCTACAAACAAAC 58.789 45.455 0.00 0.00 0.00 2.93
931 952 3.135712 TCTCAGAGCACCCTACAAACAAA 59.864 43.478 0.00 0.00 0.00 2.83
932 953 2.703536 TCTCAGAGCACCCTACAAACAA 59.296 45.455 0.00 0.00 0.00 2.83
933 954 2.325484 TCTCAGAGCACCCTACAAACA 58.675 47.619 0.00 0.00 0.00 2.83
934 955 3.244249 ACTTCTCAGAGCACCCTACAAAC 60.244 47.826 0.00 0.00 0.00 2.93
995 1016 4.179926 TGAACTTCCAGAGACATCTTCG 57.820 45.455 0.00 0.00 31.64 3.79
1006 1027 3.181471 ACCTCGCTATCATGAACTTCCAG 60.181 47.826 0.00 0.00 0.00 3.86
1113 1134 3.187227 CCAACTCTGGATCTTTGACAACG 59.813 47.826 0.00 0.00 46.92 4.10
1344 1365 2.554806 AATTGATCATGTGCTGCGTG 57.445 45.000 0.00 0.00 35.47 5.34
1347 1368 4.561606 GTCTTCAAATTGATCATGTGCTGC 59.438 41.667 0.00 0.00 0.00 5.25
1560 1581 1.004595 CTGTCATCACAGCATCCACG 58.995 55.000 0.00 0.00 43.77 4.94
1639 1660 2.275418 GAACATCACGGGCCCCAT 59.725 61.111 18.66 0.37 0.00 4.00
1758 1779 2.915659 AGTCCGGTCTTCACGCCA 60.916 61.111 0.00 0.00 0.00 5.69
1978 1999 2.751436 GGCATCGGCAGCTTTGGA 60.751 61.111 0.00 0.00 43.71 3.53
2172 2193 3.684788 CCTGGCAACTACATGTTCTACAC 59.315 47.826 2.30 0.00 36.63 2.90
2255 2276 2.356553 GCACACCCGCGACAACTA 60.357 61.111 8.23 0.00 0.00 2.24
2256 2277 3.750373 AAGCACACCCGCGACAACT 62.750 57.895 8.23 0.00 36.85 3.16
2257 2278 3.276846 AAGCACACCCGCGACAAC 61.277 61.111 8.23 0.00 36.85 3.32
2258 2279 3.276091 CAAGCACACCCGCGACAA 61.276 61.111 8.23 0.00 36.85 3.18
2263 2284 3.044059 GATGAGCAAGCACACCCGC 62.044 63.158 0.00 0.00 0.00 6.13
2264 2285 2.743752 CGATGAGCAAGCACACCCG 61.744 63.158 0.00 0.00 0.00 5.28
2288 2320 6.293955 CCCAATTAACTGTAGTGACACCAAAG 60.294 42.308 0.84 0.00 0.00 2.77
2289 2321 5.533154 CCCAATTAACTGTAGTGACACCAAA 59.467 40.000 0.84 0.00 0.00 3.28
2290 2322 5.067273 CCCAATTAACTGTAGTGACACCAA 58.933 41.667 0.84 0.00 0.00 3.67
2293 2325 3.439129 GCCCCAATTAACTGTAGTGACAC 59.561 47.826 0.00 0.00 0.00 3.67
2296 2328 2.645297 TGGCCCCAATTAACTGTAGTGA 59.355 45.455 0.00 0.00 0.00 3.41
2297 2329 3.016736 CTGGCCCCAATTAACTGTAGTG 58.983 50.000 0.00 0.00 0.00 2.74
2298 2330 2.916934 TCTGGCCCCAATTAACTGTAGT 59.083 45.455 0.00 0.00 0.00 2.73
2299 2331 3.545703 CTCTGGCCCCAATTAACTGTAG 58.454 50.000 0.00 0.00 0.00 2.74
2300 2332 2.241176 CCTCTGGCCCCAATTAACTGTA 59.759 50.000 0.00 0.00 0.00 2.74
2301 2333 1.005924 CCTCTGGCCCCAATTAACTGT 59.994 52.381 0.00 0.00 0.00 3.55
2302 2334 1.686115 CCCTCTGGCCCCAATTAACTG 60.686 57.143 0.00 0.00 0.00 3.16
2303 2335 0.631212 CCCTCTGGCCCCAATTAACT 59.369 55.000 0.00 0.00 0.00 2.24
2304 2336 0.629058 TCCCTCTGGCCCCAATTAAC 59.371 55.000 0.00 0.00 0.00 2.01
2305 2337 0.926293 CTCCCTCTGGCCCCAATTAA 59.074 55.000 0.00 0.00 0.00 1.40
2307 2339 0.253630 TACTCCCTCTGGCCCCAATT 60.254 55.000 0.00 0.00 0.00 2.32
2308 2340 0.988678 GTACTCCCTCTGGCCCCAAT 60.989 60.000 0.00 0.00 0.00 3.16
2309 2341 1.615424 GTACTCCCTCTGGCCCCAA 60.615 63.158 0.00 0.00 0.00 4.12
2310 2342 2.040606 GTACTCCCTCTGGCCCCA 59.959 66.667 0.00 0.00 0.00 4.96
2311 2343 1.384643 ATGTACTCCCTCTGGCCCC 60.385 63.158 0.00 0.00 0.00 5.80
2312 2344 0.691078 TCATGTACTCCCTCTGGCCC 60.691 60.000 0.00 0.00 0.00 5.80
2313 2345 1.428869 ATCATGTACTCCCTCTGGCC 58.571 55.000 0.00 0.00 0.00 5.36
2314 2346 3.209410 CAAATCATGTACTCCCTCTGGC 58.791 50.000 0.00 0.00 0.00 4.85
2315 2347 3.209410 GCAAATCATGTACTCCCTCTGG 58.791 50.000 0.00 0.00 0.00 3.86
2316 2348 3.877559 TGCAAATCATGTACTCCCTCTG 58.122 45.455 0.00 0.00 0.00 3.35
2317 2349 4.521146 CTTGCAAATCATGTACTCCCTCT 58.479 43.478 0.00 0.00 0.00 3.69
2318 2350 3.629398 CCTTGCAAATCATGTACTCCCTC 59.371 47.826 0.00 0.00 0.00 4.30
2319 2351 3.266772 TCCTTGCAAATCATGTACTCCCT 59.733 43.478 0.00 0.00 0.00 4.20
2320 2352 3.620488 TCCTTGCAAATCATGTACTCCC 58.380 45.455 0.00 0.00 0.00 4.30
2356 2388 2.106511 TGGACAAGAAAACAGAGGAGGG 59.893 50.000 0.00 0.00 0.00 4.30
2362 2394 2.172505 TGCCTCTGGACAAGAAAACAGA 59.827 45.455 0.00 0.00 37.61 3.41
2363 2395 2.575532 TGCCTCTGGACAAGAAAACAG 58.424 47.619 0.00 0.00 33.37 3.16
2372 2404 2.259917 TGAGAGAAATGCCTCTGGACA 58.740 47.619 0.00 0.00 43.11 4.02
2373 2405 3.465871 GATGAGAGAAATGCCTCTGGAC 58.534 50.000 0.00 0.00 43.11 4.02
2378 2410 3.818180 ACATGGATGAGAGAAATGCCTC 58.182 45.455 0.00 0.00 0.00 4.70
2390 2422 6.975196 TTCAAAGGAAAGAAACATGGATGA 57.025 33.333 0.00 0.00 0.00 2.92
2448 2480 6.009115 ACTCGGTGTTTTCCAAATCAATAC 57.991 37.500 0.00 0.00 0.00 1.89
2451 2483 4.202070 GGAACTCGGTGTTTTCCAAATCAA 60.202 41.667 0.00 0.00 39.30 2.57
2452 2484 3.316868 GGAACTCGGTGTTTTCCAAATCA 59.683 43.478 0.00 0.00 39.30 2.57
2500 2532 0.889186 AAGTGGCATGTCCGGTCAAC 60.889 55.000 5.25 0.00 37.80 3.18
2509 2541 2.380064 TCCTTCCAAAAGTGGCATGT 57.620 45.000 0.00 0.00 45.54 3.21
2564 2596 3.189287 ACATGGACGAAATGCTCTGTTTC 59.811 43.478 0.00 0.00 33.36 2.78
2579 2611 5.279006 GGGAGAAAAGAAAAGGAACATGGAC 60.279 44.000 0.00 0.00 0.00 4.02
2583 2615 5.705400 TCAGGGAGAAAAGAAAAGGAACAT 58.295 37.500 0.00 0.00 0.00 2.71
2605 2637 8.208718 TGTATCACAATGTAATGCTTAGGTTC 57.791 34.615 0.00 0.00 0.00 3.62
2609 2641 7.040892 AGGCATGTATCACAATGTAATGCTTAG 60.041 37.037 13.08 0.00 39.08 2.18
2611 2643 5.595542 AGGCATGTATCACAATGTAATGCTT 59.404 36.000 13.08 6.56 39.08 3.91
2613 2645 5.443185 AGGCATGTATCACAATGTAATGC 57.557 39.130 0.00 0.00 38.52 3.56
2626 2659 3.153369 TGTGGTTGACAAGGCATGTAT 57.847 42.857 0.00 0.00 44.12 2.29
2647 2680 2.968574 TGAGGAGAGAAGACTTGCAACT 59.031 45.455 0.00 0.00 0.00 3.16
2700 2795 4.661222 TCACTTTCAAATATCTGGGTGCA 58.339 39.130 0.00 0.00 0.00 4.57
2701 2796 5.643379 TTCACTTTCAAATATCTGGGTGC 57.357 39.130 0.00 0.00 0.00 5.01
2702 2797 6.095377 GCTTTCACTTTCAAATATCTGGGTG 58.905 40.000 0.00 0.00 0.00 4.61
2703 2798 5.774690 TGCTTTCACTTTCAAATATCTGGGT 59.225 36.000 0.00 0.00 0.00 4.51
2704 2799 6.271488 TGCTTTCACTTTCAAATATCTGGG 57.729 37.500 0.00 0.00 0.00 4.45
2705 2800 8.490355 GTTTTGCTTTCACTTTCAAATATCTGG 58.510 33.333 0.00 0.00 0.00 3.86
2706 2801 9.033481 TGTTTTGCTTTCACTTTCAAATATCTG 57.967 29.630 0.00 0.00 0.00 2.90
2716 2811 7.495279 TGAAATGCTATGTTTTGCTTTCACTTT 59.505 29.630 0.00 0.00 34.64 2.66
2728 2823 6.040166 GGAGACATGGATGAAATGCTATGTTT 59.960 38.462 0.00 0.00 36.87 2.83
2762 2857 9.973661 TCATATAATGTCTCAAGAAAGGGAAAA 57.026 29.630 0.00 0.00 0.00 2.29
2766 2861 9.736414 ATCATCATATAATGTCTCAAGAAAGGG 57.264 33.333 0.00 0.00 0.00 3.95
2771 2866 9.846248 CGTGTATCATCATATAATGTCTCAAGA 57.154 33.333 0.00 0.00 0.00 3.02
2772 2867 8.590470 GCGTGTATCATCATATAATGTCTCAAG 58.410 37.037 0.00 0.00 0.00 3.02
2773 2868 8.087750 TGCGTGTATCATCATATAATGTCTCAA 58.912 33.333 0.00 0.00 0.00 3.02
2774 2869 7.601856 TGCGTGTATCATCATATAATGTCTCA 58.398 34.615 0.00 0.00 0.00 3.27
2775 2870 8.538039 CATGCGTGTATCATCATATAATGTCTC 58.462 37.037 0.00 0.00 0.00 3.36
2776 2871 7.010830 GCATGCGTGTATCATCATATAATGTCT 59.989 37.037 0.00 0.00 0.00 3.41
2777 2872 7.010830 AGCATGCGTGTATCATCATATAATGTC 59.989 37.037 13.01 0.00 0.00 3.06
2778 2873 6.820152 AGCATGCGTGTATCATCATATAATGT 59.180 34.615 13.01 0.00 0.00 2.71
2779 2874 7.242914 AGCATGCGTGTATCATCATATAATG 57.757 36.000 13.01 0.00 0.00 1.90
2780 2875 6.199719 CGAGCATGCGTGTATCATCATATAAT 59.800 38.462 13.01 0.00 0.00 1.28
2781 2876 5.516339 CGAGCATGCGTGTATCATCATATAA 59.484 40.000 13.01 0.00 0.00 0.98
2782 2877 5.036737 CGAGCATGCGTGTATCATCATATA 58.963 41.667 13.01 0.00 0.00 0.86
2783 2878 3.861689 CGAGCATGCGTGTATCATCATAT 59.138 43.478 13.01 0.00 0.00 1.78
2784 2879 3.244976 CGAGCATGCGTGTATCATCATA 58.755 45.455 13.01 0.00 0.00 2.15
2785 2880 2.064014 CGAGCATGCGTGTATCATCAT 58.936 47.619 13.01 0.00 0.00 2.45
2786 2881 1.202405 ACGAGCATGCGTGTATCATCA 60.202 47.619 13.01 0.00 43.79 3.07
2787 2882 1.453524 GACGAGCATGCGTGTATCATC 59.546 52.381 13.01 0.00 45.72 2.92
2788 2883 1.202405 TGACGAGCATGCGTGTATCAT 60.202 47.619 13.01 0.00 45.72 2.45
2792 2887 0.242555 TTCTGACGAGCATGCGTGTA 59.757 50.000 13.01 0.00 45.72 2.90
2796 2891 0.368227 GAGTTTCTGACGAGCATGCG 59.632 55.000 13.01 0.84 37.29 4.73
2838 2934 7.903431 CGGCTATGACTAAAAAGAACACATTAC 59.097 37.037 0.00 0.00 0.00 1.89
2852 2948 2.035449 CGGAATCCACGGCTATGACTAA 59.965 50.000 0.00 0.00 0.00 2.24
2855 2951 1.222115 GCGGAATCCACGGCTATGAC 61.222 60.000 0.00 0.00 34.19 3.06
2856 2952 1.069090 GCGGAATCCACGGCTATGA 59.931 57.895 0.00 0.00 34.19 2.15
2857 2953 0.946221 GAGCGGAATCCACGGCTATG 60.946 60.000 0.00 0.00 44.19 2.23
2858 2954 1.367840 GAGCGGAATCCACGGCTAT 59.632 57.895 0.00 0.00 44.19 2.97
2859 2955 1.609635 TTGAGCGGAATCCACGGCTA 61.610 55.000 0.00 0.00 44.19 3.93
2865 2967 0.606096 TCGACTTTGAGCGGAATCCA 59.394 50.000 0.00 0.00 0.00 3.41
2887 2989 1.079336 GTAACTCCAGACACCGGGC 60.079 63.158 6.32 0.00 0.00 6.13
2888 2990 0.246635 CTGTAACTCCAGACACCGGG 59.753 60.000 6.32 0.00 34.23 5.73
2899 3001 3.728845 TCAGCCTTGAACACTGTAACTC 58.271 45.455 0.00 0.00 33.12 3.01
2901 3003 4.153117 CAGATCAGCCTTGAACACTGTAAC 59.847 45.833 0.00 0.00 36.78 2.50
2917 3019 2.490903 CCTTTGCTTTCCACCAGATCAG 59.509 50.000 0.00 0.00 0.00 2.90
2939 3041 6.652205 TCTGAAAGTTTAGGGGATTATGGT 57.348 37.500 0.00 0.00 33.76 3.55
2941 3043 7.346471 TCCTTCTGAAAGTTTAGGGGATTATG 58.654 38.462 2.93 0.00 31.96 1.90
2942 3044 7.525158 TCCTTCTGAAAGTTTAGGGGATTAT 57.475 36.000 2.93 0.00 31.96 1.28
2943 3045 6.963117 TCCTTCTGAAAGTTTAGGGGATTA 57.037 37.500 2.93 0.00 31.96 1.75
2944 3046 5.860648 TCCTTCTGAAAGTTTAGGGGATT 57.139 39.130 2.93 0.00 31.96 3.01
2945 3047 5.860648 TTCCTTCTGAAAGTTTAGGGGAT 57.139 39.130 2.93 0.00 31.96 3.85
2946 3048 5.860648 ATTCCTTCTGAAAGTTTAGGGGA 57.139 39.130 2.93 4.18 36.33 4.81
2947 3049 6.249192 AGAATTCCTTCTGAAAGTTTAGGGG 58.751 40.000 0.65 2.47 40.28 4.79
2948 3050 7.883311 TGTAGAATTCCTTCTGAAAGTTTAGGG 59.117 37.037 0.65 0.00 41.83 3.53
2949 3051 8.722394 GTGTAGAATTCCTTCTGAAAGTTTAGG 58.278 37.037 0.65 0.00 41.83 2.69
2950 3052 8.722394 GGTGTAGAATTCCTTCTGAAAGTTTAG 58.278 37.037 0.65 0.00 41.83 1.85
2951 3053 7.664318 GGGTGTAGAATTCCTTCTGAAAGTTTA 59.336 37.037 0.65 0.00 41.83 2.01
2952 3054 6.490381 GGGTGTAGAATTCCTTCTGAAAGTTT 59.510 38.462 0.65 0.00 41.83 2.66
2978 3080 2.888534 GTTTCATCCGCGGCGCTA 60.889 61.111 30.54 18.26 0.00 4.26
2993 3095 2.704065 CACCTGGTATCGGATTAGGGTT 59.296 50.000 0.00 0.00 32.81 4.11
2998 3100 5.072741 GGTACTACACCTGGTATCGGATTA 58.927 45.833 0.00 0.00 44.79 1.75
3019 3121 1.080501 CACGTCTCAGCGACATGGT 60.081 57.895 0.00 0.00 42.98 3.55
3046 3148 0.315869 CGCACAACGGTGTTCTGTTC 60.316 55.000 1.53 0.00 46.95 3.18
3047 3149 1.719117 CGCACAACGGTGTTCTGTT 59.281 52.632 1.53 0.00 46.95 3.16
3096 6493 7.934457 ACAGTATTTGATTGATTGCCTGTATC 58.066 34.615 0.00 0.00 0.00 2.24



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.