Multiple sequence alignment - TraesCS2B01G525100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G525100 chr2B 100.000 3359 0 0 1 3359 719462444 719465802 0.000000e+00 6204.0
1 TraesCS2B01G525100 chr2B 98.000 50 1 0 212 261 719462606 719462655 1.660000e-13 87.9
2 TraesCS2B01G525100 chr2A 95.322 2052 86 5 369 2411 727948825 727950875 0.000000e+00 3249.0
3 TraesCS2B01G525100 chr2A 85.432 556 48 9 2812 3359 727952134 727952664 6.340000e-152 547.0
4 TraesCS2B01G525100 chr2A 86.792 212 27 1 1 212 338270006 338269796 5.600000e-58 235.0
5 TraesCS2B01G525100 chr2D 95.002 2061 85 5 369 2411 593208980 593211040 0.000000e+00 3219.0
6 TraesCS2B01G525100 chr2D 87.534 369 34 7 2812 3172 593211631 593211995 1.860000e-112 416.0
7 TraesCS2B01G525100 chr2D 89.691 194 19 1 1 194 192142259 192142067 2.590000e-61 246.0
8 TraesCS2B01G525100 chr2D 88.387 155 17 1 3205 3359 593211992 593212145 5.720000e-43 185.0
9 TraesCS2B01G525100 chr7D 88.406 207 24 0 6 212 167741239 167741033 2.000000e-62 250.0
10 TraesCS2B01G525100 chr7D 86.321 212 29 0 1 212 164179476 164179687 7.250000e-57 231.0
11 TraesCS2B01G525100 chr3D 87.264 212 27 0 1 212 160881904 160882115 3.350000e-60 243.0
12 TraesCS2B01G525100 chr6D 86.792 212 28 0 1 212 178836534 178836323 1.560000e-58 237.0
13 TraesCS2B01G525100 chr1D 86.792 212 28 0 1 212 442418443 442418654 1.560000e-58 237.0
14 TraesCS2B01G525100 chr4B 86.854 213 25 3 1 212 518689350 518689140 5.600000e-58 235.0
15 TraesCS2B01G525100 chr4D 87.379 206 23 3 6 210 450127083 450127286 2.020000e-57 233.0
16 TraesCS2B01G525100 chr5D 87.879 99 11 1 496 594 370950954 370950857 7.620000e-22 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G525100 chr2B 719462444 719465802 3358 False 3145.950000 6204 99.000000 1 3359 2 chr2B.!!$F1 3358
1 TraesCS2B01G525100 chr2A 727948825 727952664 3839 False 1898.000000 3249 90.377000 369 3359 2 chr2A.!!$F1 2990
2 TraesCS2B01G525100 chr2D 593208980 593212145 3165 False 1273.333333 3219 90.307667 369 3359 3 chr2D.!!$F1 2990


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
236 237 0.033366 TGTGCAACGCTTCAGAGCTA 59.967 50.0 0.00 0.00 46.96 3.32 F
253 254 0.038526 CTAGGCGCTATACCGTTGGG 60.039 60.0 7.64 0.00 40.11 4.12 F
287 288 0.040067 GTCAGGCGCCACTCAAAAAG 60.040 55.0 31.54 6.38 0.00 2.27 F
841 856 0.041833 CACCTTCCTCCTCTCCTCCA 59.958 60.0 0.00 0.00 0.00 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1773 1791 0.245539 CCAGGCCATGTTTCTTGCAG 59.754 55.0 5.01 0.00 0.00 4.41 R
2130 2148 0.245539 GCACCTTGATTGCATGCACT 59.754 50.0 22.58 16.46 39.93 4.40 R
2151 2169 1.083806 CAATTGCCAGACGCTCGCTA 61.084 55.0 0.00 0.00 38.78 4.26 R
2740 2762 0.032952 CGGAAGGACGACTTTGTGGA 59.967 55.0 0.00 0.00 40.21 4.02 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.071874 TGTAACTGCTGAAGAATGGGG 57.928 47.619 0.00 0.00 0.00 4.96
21 22 2.375174 TGTAACTGCTGAAGAATGGGGT 59.625 45.455 0.00 0.00 0.00 4.95
22 23 2.683211 AACTGCTGAAGAATGGGGTT 57.317 45.000 0.00 0.00 0.00 4.11
23 24 1.915141 ACTGCTGAAGAATGGGGTTG 58.085 50.000 0.00 0.00 0.00 3.77
24 25 1.180029 CTGCTGAAGAATGGGGTTGG 58.820 55.000 0.00 0.00 0.00 3.77
25 26 0.899717 TGCTGAAGAATGGGGTTGGC 60.900 55.000 0.00 0.00 0.00 4.52
26 27 1.937546 GCTGAAGAATGGGGTTGGCG 61.938 60.000 0.00 0.00 0.00 5.69
27 28 1.304052 TGAAGAATGGGGTTGGCGG 60.304 57.895 0.00 0.00 0.00 6.13
28 29 2.037208 AAGAATGGGGTTGGCGGG 59.963 61.111 0.00 0.00 0.00 6.13
29 30 3.600410 AAGAATGGGGTTGGCGGGG 62.600 63.158 0.00 0.00 0.00 5.73
59 60 3.643978 GCGGCGGCTGCATCTAAG 61.644 66.667 27.92 4.01 45.35 2.18
60 61 2.202932 CGGCGGCTGCATCTAAGT 60.203 61.111 21.31 0.00 45.35 2.24
61 62 2.240500 CGGCGGCTGCATCTAAGTC 61.241 63.158 21.31 0.00 45.35 3.01
62 63 1.153369 GGCGGCTGCATCTAAGTCA 60.153 57.895 21.31 0.00 45.35 3.41
63 64 0.744414 GGCGGCTGCATCTAAGTCAA 60.744 55.000 21.31 0.00 45.35 3.18
64 65 1.303309 GCGGCTGCATCTAAGTCAAT 58.697 50.000 14.08 0.00 42.15 2.57
65 66 1.003116 GCGGCTGCATCTAAGTCAATG 60.003 52.381 14.08 0.00 42.15 2.82
66 67 2.283298 CGGCTGCATCTAAGTCAATGT 58.717 47.619 0.50 0.00 0.00 2.71
67 68 2.031314 CGGCTGCATCTAAGTCAATGTG 59.969 50.000 0.50 0.00 0.00 3.21
68 69 2.223433 GGCTGCATCTAAGTCAATGTGC 60.223 50.000 0.50 0.00 0.00 4.57
69 70 2.421073 GCTGCATCTAAGTCAATGTGCA 59.579 45.455 0.00 0.00 39.94 4.57
70 71 3.119743 GCTGCATCTAAGTCAATGTGCAA 60.120 43.478 0.00 0.00 41.41 4.08
71 72 4.439700 GCTGCATCTAAGTCAATGTGCAAT 60.440 41.667 0.00 0.00 41.41 3.56
72 73 4.989044 TGCATCTAAGTCAATGTGCAATG 58.011 39.130 0.00 0.00 39.36 2.82
73 74 3.795101 GCATCTAAGTCAATGTGCAATGC 59.205 43.478 0.00 0.00 33.09 3.56
74 75 4.357142 CATCTAAGTCAATGTGCAATGCC 58.643 43.478 1.53 0.00 0.00 4.40
75 76 3.689347 TCTAAGTCAATGTGCAATGCCT 58.311 40.909 1.53 0.00 0.00 4.75
76 77 4.842574 TCTAAGTCAATGTGCAATGCCTA 58.157 39.130 1.53 0.00 0.00 3.93
77 78 5.252547 TCTAAGTCAATGTGCAATGCCTAA 58.747 37.500 1.53 0.00 0.00 2.69
78 79 4.445452 AAGTCAATGTGCAATGCCTAAG 57.555 40.909 1.53 0.00 0.00 2.18
79 80 2.756760 AGTCAATGTGCAATGCCTAAGG 59.243 45.455 1.53 0.00 0.00 2.69
80 81 2.101783 TCAATGTGCAATGCCTAAGGG 58.898 47.619 1.53 0.00 0.00 3.95
90 91 2.187946 CCTAAGGGCCAGACGCTG 59.812 66.667 6.18 0.52 41.51 5.18
91 92 2.512515 CTAAGGGCCAGACGCTGC 60.513 66.667 6.18 0.00 41.51 5.25
92 93 3.315142 CTAAGGGCCAGACGCTGCA 62.315 63.158 6.18 0.00 41.51 4.41
93 94 3.605749 TAAGGGCCAGACGCTGCAC 62.606 63.158 6.18 0.00 41.51 4.57
96 97 3.058160 GGCCAGACGCTGCACATT 61.058 61.111 0.00 0.00 37.74 2.71
97 98 1.745115 GGCCAGACGCTGCACATTA 60.745 57.895 0.00 0.00 37.74 1.90
98 99 1.425428 GCCAGACGCTGCACATTAC 59.575 57.895 0.00 0.00 0.00 1.89
99 100 1.298157 GCCAGACGCTGCACATTACA 61.298 55.000 0.00 0.00 0.00 2.41
100 101 1.372582 CCAGACGCTGCACATTACAT 58.627 50.000 0.00 0.00 0.00 2.29
101 102 1.063027 CCAGACGCTGCACATTACATG 59.937 52.381 0.00 0.00 0.00 3.21
102 103 1.733912 CAGACGCTGCACATTACATGT 59.266 47.619 2.69 2.69 46.22 3.21
110 111 2.179764 ACATTACATGTGTGGCGCC 58.820 52.632 22.73 22.73 43.01 6.53
111 112 0.322456 ACATTACATGTGTGGCGCCT 60.322 50.000 29.70 7.80 43.01 5.52
112 113 1.065782 ACATTACATGTGTGGCGCCTA 60.066 47.619 29.70 14.39 43.01 3.93
113 114 1.599071 CATTACATGTGTGGCGCCTAG 59.401 52.381 29.70 12.91 0.00 3.02
126 127 2.416678 CCTAGCTCTGAGGCGCTG 59.583 66.667 7.64 0.00 37.05 5.18
127 128 2.279385 CTAGCTCTGAGGCGCTGC 60.279 66.667 7.64 0.00 37.05 5.25
128 129 3.070576 TAGCTCTGAGGCGCTGCA 61.071 61.111 7.64 4.82 37.05 4.41
129 130 3.362399 TAGCTCTGAGGCGCTGCAC 62.362 63.158 7.64 0.00 37.05 4.57
130 131 4.756458 GCTCTGAGGCGCTGCACT 62.756 66.667 7.64 0.00 0.00 4.40
131 132 2.508887 CTCTGAGGCGCTGCACTC 60.509 66.667 7.64 12.75 0.00 3.51
132 133 4.074526 TCTGAGGCGCTGCACTCC 62.075 66.667 7.64 6.67 32.80 3.85
133 134 4.079850 CTGAGGCGCTGCACTCCT 62.080 66.667 7.64 10.87 32.80 3.69
134 135 4.383861 TGAGGCGCTGCACTCCTG 62.384 66.667 7.64 0.00 32.80 3.86
176 177 2.941333 CTGGACAGCTGTGCAACG 59.059 61.111 35.83 24.16 45.55 4.10
177 178 3.245948 CTGGACAGCTGTGCAACGC 62.246 63.158 35.83 16.38 45.55 4.84
178 179 4.030452 GGACAGCTGTGCAACGCC 62.030 66.667 30.84 17.82 42.39 5.68
179 180 2.974698 GACAGCTGTGCAACGCCT 60.975 61.111 27.27 0.00 42.39 5.52
180 181 2.959357 GACAGCTGTGCAACGCCTC 61.959 63.158 27.27 1.81 42.39 4.70
181 182 2.974148 CAGCTGTGCAACGCCTCA 60.974 61.111 5.25 0.00 42.39 3.86
182 183 2.667536 AGCTGTGCAACGCCTCAG 60.668 61.111 4.98 0.42 42.39 3.35
183 184 2.666190 GCTGTGCAACGCCTCAGA 60.666 61.111 4.08 0.00 42.39 3.27
184 185 2.675056 GCTGTGCAACGCCTCAGAG 61.675 63.158 4.08 0.00 42.39 3.35
185 186 2.666190 TGTGCAACGCCTCAGAGC 60.666 61.111 0.00 0.00 42.39 4.09
186 187 2.358003 GTGCAACGCCTCAGAGCT 60.358 61.111 0.00 0.00 0.00 4.09
187 188 1.079819 GTGCAACGCCTCAGAGCTA 60.080 57.895 0.00 0.00 0.00 3.32
188 189 1.080995 GTGCAACGCCTCAGAGCTAG 61.081 60.000 0.00 0.00 0.00 3.42
189 190 1.520342 GCAACGCCTCAGAGCTAGG 60.520 63.158 0.00 0.00 37.17 3.02
202 203 2.810486 GCTAGGCGCTATACCGTTG 58.190 57.895 7.64 0.00 35.14 4.10
203 204 0.666577 GCTAGGCGCTATACCGTTGG 60.667 60.000 7.64 0.00 35.14 3.77
204 205 0.038526 CTAGGCGCTATACCGTTGGG 60.039 60.000 7.64 0.00 40.11 4.12
214 215 4.920112 CCGTTGGGTGTGGCGACA 62.920 66.667 0.00 0.00 38.70 4.35
215 216 3.345808 CGTTGGGTGTGGCGACAG 61.346 66.667 0.12 0.00 44.46 3.51
220 221 3.349006 GGTGTGGCGACAGCTGTG 61.349 66.667 27.27 17.30 45.46 3.66
221 222 4.017877 GTGTGGCGACAGCTGTGC 62.018 66.667 27.27 25.41 44.46 4.57
222 223 4.544047 TGTGGCGACAGCTGTGCA 62.544 61.111 27.27 14.77 44.46 4.57
223 224 3.279116 GTGGCGACAGCTGTGCAA 61.279 61.111 27.27 18.41 44.46 4.08
224 225 3.279116 TGGCGACAGCTGTGCAAC 61.279 61.111 27.27 15.45 44.37 4.17
225 226 4.374702 GGCGACAGCTGTGCAACG 62.375 66.667 27.27 21.96 44.37 4.10
227 228 3.341043 CGACAGCTGTGCAACGCT 61.341 61.111 27.27 5.24 44.91 5.07
228 229 2.885676 CGACAGCTGTGCAACGCTT 61.886 57.895 27.27 0.00 42.32 4.68
229 230 1.082496 GACAGCTGTGCAACGCTTC 60.082 57.895 27.27 1.81 42.32 3.86
230 231 1.775039 GACAGCTGTGCAACGCTTCA 61.775 55.000 27.27 0.00 42.32 3.02
231 232 1.082300 CAGCTGTGCAACGCTTCAG 60.082 57.895 5.25 2.02 42.32 3.02
232 233 1.227645 AGCTGTGCAACGCTTCAGA 60.228 52.632 5.24 0.00 42.32 3.27
233 234 1.206072 GCTGTGCAACGCTTCAGAG 59.794 57.895 4.08 0.00 42.39 3.35
234 235 1.206072 CTGTGCAACGCTTCAGAGC 59.794 57.895 0.00 0.00 45.65 4.09
235 236 1.226686 CTGTGCAACGCTTCAGAGCT 61.227 55.000 0.00 0.00 46.96 4.09
236 237 0.033366 TGTGCAACGCTTCAGAGCTA 59.967 50.000 0.00 0.00 46.96 3.32
237 238 0.718343 GTGCAACGCTTCAGAGCTAG 59.282 55.000 0.00 0.00 46.96 3.42
238 239 0.390340 TGCAACGCTTCAGAGCTAGG 60.390 55.000 0.00 0.00 46.96 3.02
239 240 1.700600 GCAACGCTTCAGAGCTAGGC 61.701 60.000 0.00 0.00 46.96 3.93
240 241 1.153745 AACGCTTCAGAGCTAGGCG 60.154 57.895 9.63 9.63 46.96 5.52
241 242 2.959071 CGCTTCAGAGCTAGGCGC 60.959 66.667 0.00 0.00 46.96 6.53
251 252 2.810486 GCTAGGCGCTATACCGTTG 58.190 57.895 7.64 0.00 35.14 4.10
252 253 0.666577 GCTAGGCGCTATACCGTTGG 60.667 60.000 7.64 0.00 35.14 3.77
253 254 0.038526 CTAGGCGCTATACCGTTGGG 60.039 60.000 7.64 0.00 40.11 4.12
263 264 4.619227 CCGTTGGGTGTGGCGTCT 62.619 66.667 0.00 0.00 0.00 4.18
264 265 2.590575 CGTTGGGTGTGGCGTCTT 60.591 61.111 0.00 0.00 0.00 3.01
265 266 2.604174 CGTTGGGTGTGGCGTCTTC 61.604 63.158 0.00 0.00 0.00 2.87
266 267 1.227853 GTTGGGTGTGGCGTCTTCT 60.228 57.895 0.00 0.00 0.00 2.85
267 268 0.818040 GTTGGGTGTGGCGTCTTCTT 60.818 55.000 0.00 0.00 0.00 2.52
268 269 0.817634 TTGGGTGTGGCGTCTTCTTG 60.818 55.000 0.00 0.00 0.00 3.02
269 270 1.227853 GGGTGTGGCGTCTTCTTGT 60.228 57.895 0.00 0.00 0.00 3.16
270 271 1.228657 GGGTGTGGCGTCTTCTTGTC 61.229 60.000 0.00 0.00 0.00 3.18
271 272 0.531974 GGTGTGGCGTCTTCTTGTCA 60.532 55.000 0.00 0.00 0.00 3.58
272 273 0.861837 GTGTGGCGTCTTCTTGTCAG 59.138 55.000 0.00 0.00 0.00 3.51
273 274 0.249868 TGTGGCGTCTTCTTGTCAGG 60.250 55.000 0.00 0.00 0.00 3.86
274 275 1.301716 TGGCGTCTTCTTGTCAGGC 60.302 57.895 0.00 0.00 0.00 4.85
275 276 2.383527 GGCGTCTTCTTGTCAGGCG 61.384 63.158 0.00 0.00 42.42 5.52
276 277 3.159984 CGTCTTCTTGTCAGGCGC 58.840 61.111 0.00 0.00 31.61 6.53
277 278 2.383527 CGTCTTCTTGTCAGGCGCC 61.384 63.158 21.89 21.89 31.61 6.53
278 279 1.301716 GTCTTCTTGTCAGGCGCCA 60.302 57.895 31.54 5.56 0.00 5.69
279 280 1.301716 TCTTCTTGTCAGGCGCCAC 60.302 57.895 31.54 20.07 0.00 5.01
280 281 1.302033 CTTCTTGTCAGGCGCCACT 60.302 57.895 31.54 5.56 0.00 4.00
281 282 1.294659 CTTCTTGTCAGGCGCCACTC 61.295 60.000 31.54 17.94 0.00 3.51
282 283 2.031012 CTTGTCAGGCGCCACTCA 59.969 61.111 31.54 20.43 0.00 3.41
283 284 1.597854 CTTGTCAGGCGCCACTCAA 60.598 57.895 31.54 25.56 0.00 3.02
284 285 1.153066 TTGTCAGGCGCCACTCAAA 60.153 52.632 31.54 13.31 0.00 2.69
285 286 0.749818 TTGTCAGGCGCCACTCAAAA 60.750 50.000 31.54 12.15 0.00 2.44
286 287 0.749818 TGTCAGGCGCCACTCAAAAA 60.750 50.000 31.54 2.05 0.00 1.94
287 288 0.040067 GTCAGGCGCCACTCAAAAAG 60.040 55.000 31.54 6.38 0.00 2.27
288 289 0.179032 TCAGGCGCCACTCAAAAAGA 60.179 50.000 31.54 8.72 0.00 2.52
289 290 0.883833 CAGGCGCCACTCAAAAAGAT 59.116 50.000 31.54 0.00 0.00 2.40
290 291 1.135575 CAGGCGCCACTCAAAAAGATC 60.136 52.381 31.54 0.00 0.00 2.75
291 292 0.881118 GGCGCCACTCAAAAAGATCA 59.119 50.000 24.80 0.00 0.00 2.92
292 293 1.135575 GGCGCCACTCAAAAAGATCAG 60.136 52.381 24.80 0.00 0.00 2.90
293 294 1.537202 GCGCCACTCAAAAAGATCAGT 59.463 47.619 0.00 0.00 0.00 3.41
294 295 2.413371 GCGCCACTCAAAAAGATCAGTC 60.413 50.000 0.00 0.00 0.00 3.51
295 296 2.160417 CGCCACTCAAAAAGATCAGTCC 59.840 50.000 0.00 0.00 0.00 3.85
296 297 3.149196 GCCACTCAAAAAGATCAGTCCA 58.851 45.455 0.00 0.00 0.00 4.02
297 298 3.190118 GCCACTCAAAAAGATCAGTCCAG 59.810 47.826 0.00 0.00 0.00 3.86
298 299 4.392940 CCACTCAAAAAGATCAGTCCAGT 58.607 43.478 0.00 0.00 0.00 4.00
299 300 5.551233 CCACTCAAAAAGATCAGTCCAGTA 58.449 41.667 0.00 0.00 0.00 2.74
300 301 5.997746 CCACTCAAAAAGATCAGTCCAGTAA 59.002 40.000 0.00 0.00 0.00 2.24
301 302 6.486657 CCACTCAAAAAGATCAGTCCAGTAAA 59.513 38.462 0.00 0.00 0.00 2.01
302 303 7.013274 CCACTCAAAAAGATCAGTCCAGTAAAA 59.987 37.037 0.00 0.00 0.00 1.52
303 304 8.072567 CACTCAAAAAGATCAGTCCAGTAAAAG 58.927 37.037 0.00 0.00 0.00 2.27
304 305 7.993183 ACTCAAAAAGATCAGTCCAGTAAAAGA 59.007 33.333 0.00 0.00 0.00 2.52
305 306 8.746052 TCAAAAAGATCAGTCCAGTAAAAGAA 57.254 30.769 0.00 0.00 0.00 2.52
306 307 9.184523 TCAAAAAGATCAGTCCAGTAAAAGAAA 57.815 29.630 0.00 0.00 0.00 2.52
307 308 9.971922 CAAAAAGATCAGTCCAGTAAAAGAAAT 57.028 29.630 0.00 0.00 0.00 2.17
312 313 9.454859 AGATCAGTCCAGTAAAAGAAATTTAGG 57.545 33.333 0.00 0.00 34.21 2.69
313 314 9.449719 GATCAGTCCAGTAAAAGAAATTTAGGA 57.550 33.333 0.00 0.00 34.21 2.94
314 315 8.848474 TCAGTCCAGTAAAAGAAATTTAGGAG 57.152 34.615 0.00 0.00 34.21 3.69
315 316 8.437575 TCAGTCCAGTAAAAGAAATTTAGGAGT 58.562 33.333 0.00 0.00 34.31 3.85
316 317 9.720769 CAGTCCAGTAAAAGAAATTTAGGAGTA 57.279 33.333 0.00 0.00 33.18 2.59
317 318 9.945904 AGTCCAGTAAAAGAAATTTAGGAGTAG 57.054 33.333 0.00 0.00 33.18 2.57
318 319 9.722184 GTCCAGTAAAAGAAATTTAGGAGTAGT 57.278 33.333 0.00 0.00 34.21 2.73
344 345 7.343691 TCATTTTGTGAATTGATTTTGTTCGC 58.656 30.769 0.00 0.00 32.78 4.70
345 346 6.653273 TTTTGTGAATTGATTTTGTTCGCA 57.347 29.167 0.00 0.00 39.70 5.10
346 347 6.653273 TTTGTGAATTGATTTTGTTCGCAA 57.347 29.167 8.67 8.67 45.29 4.85
347 348 5.886715 TGTGAATTGATTTTGTTCGCAAG 57.113 34.783 0.00 0.00 38.84 4.01
348 349 5.347342 TGTGAATTGATTTTGTTCGCAAGT 58.653 33.333 0.00 0.00 38.84 3.16
349 350 5.458452 TGTGAATTGATTTTGTTCGCAAGTC 59.542 36.000 0.00 0.00 38.84 3.01
350 351 5.458452 GTGAATTGATTTTGTTCGCAAGTCA 59.542 36.000 0.00 0.00 41.25 3.41
351 352 6.019961 GTGAATTGATTTTGTTCGCAAGTCAA 60.020 34.615 0.00 10.37 43.79 3.18
352 353 6.533012 TGAATTGATTTTGTTCGCAAGTCAAA 59.467 30.769 0.00 0.00 40.79 2.69
353 354 6.900568 ATTGATTTTGTTCGCAAGTCAAAA 57.099 29.167 11.35 0.00 46.28 2.44
358 359 5.694674 TTTGTTCGCAAGTCAAAATTGTC 57.305 34.783 0.00 0.00 38.44 3.18
359 360 4.362932 TGTTCGCAAGTCAAAATTGTCA 57.637 36.364 0.00 0.00 39.48 3.58
360 361 4.738124 TGTTCGCAAGTCAAAATTGTCAA 58.262 34.783 0.00 0.00 39.48 3.18
361 362 5.164233 TGTTCGCAAGTCAAAATTGTCAAA 58.836 33.333 0.00 0.00 39.48 2.69
362 363 5.061560 TGTTCGCAAGTCAAAATTGTCAAAC 59.938 36.000 0.00 0.00 39.48 2.93
363 364 4.992688 TCGCAAGTCAAAATTGTCAAACT 58.007 34.783 0.00 0.00 39.48 2.66
364 365 5.406649 TCGCAAGTCAAAATTGTCAAACTT 58.593 33.333 0.00 0.00 39.48 2.66
365 366 5.288232 TCGCAAGTCAAAATTGTCAAACTTG 59.712 36.000 17.27 17.27 43.92 3.16
367 368 5.798910 CAAGTCAAAATTGTCAAACTTGCC 58.201 37.500 12.02 0.31 37.76 4.52
397 405 1.340657 GCTCTCGCAGTCTGTCGTTG 61.341 60.000 13.75 9.66 35.78 4.10
463 471 1.375396 CGTCTCCATGCCGTTGGAA 60.375 57.895 2.26 0.00 45.03 3.53
469 477 1.973281 CATGCCGTTGGAACAGCCT 60.973 57.895 0.00 0.00 42.39 4.58
470 478 1.675641 ATGCCGTTGGAACAGCCTC 60.676 57.895 0.00 0.00 42.39 4.70
473 481 3.423154 CGTTGGAACAGCCTCCGC 61.423 66.667 0.00 0.00 42.39 5.54
511 519 4.980805 TTCCACGCGCACCCTGAC 62.981 66.667 5.73 0.00 0.00 3.51
841 856 0.041833 CACCTTCCTCCTCTCCTCCA 59.958 60.000 0.00 0.00 0.00 3.86
848 863 1.149711 CCTCCTCTCCTCCATCTCCAT 59.850 57.143 0.00 0.00 0.00 3.41
863 878 4.873129 CATCCACCTCGACGCCGG 62.873 72.222 0.00 0.00 36.24 6.13
1098 1116 3.443045 GGCATGGTGAGGGTTGCG 61.443 66.667 0.00 0.00 35.95 4.85
1113 1131 1.070821 TTGCGCGAGAGATGTTTGAG 58.929 50.000 12.10 0.00 0.00 3.02
1173 1191 1.146263 GGGCGGGTATGTGAAGGAG 59.854 63.158 0.00 0.00 0.00 3.69
1185 1203 1.385206 GAAGGAGGGGGAGCTGGAT 60.385 63.158 0.00 0.00 0.00 3.41
1191 1209 4.864334 GGGGAGCTGGATGTGGCG 62.864 72.222 0.00 0.00 0.00 5.69
1198 1216 4.429522 TGGATGTGGCGCTGGCAT 62.430 61.111 7.64 9.50 40.92 4.40
1221 1239 6.590656 TTGTTTAGGGATATGGTGGAGAAT 57.409 37.500 0.00 0.00 0.00 2.40
1327 1345 2.554032 CACCAGGTTGTCCATCAAGAAC 59.446 50.000 0.00 0.00 36.66 3.01
1348 1366 3.111853 GGATGCCGATCAGTGTGAATA 57.888 47.619 0.00 0.00 0.00 1.75
1383 1401 3.201930 TGGTGGATATGTATGCCAAGTGT 59.798 43.478 0.00 0.00 32.68 3.55
1392 1410 0.476338 ATGCCAAGTGTGGGTGTGTA 59.524 50.000 0.00 0.00 46.09 2.90
1425 1443 2.369394 GAAGTTTTCGATGGGATGCCT 58.631 47.619 4.35 0.00 0.00 4.75
1461 1479 4.223800 TGGAACGCCATGATCTGC 57.776 55.556 0.00 0.00 39.92 4.26
1520 1538 4.519147 GAACTCTTTGAACAGTTTCTCGC 58.481 43.478 0.00 0.00 32.83 5.03
1548 1566 4.273969 GGTTTGAGTCCAACGAACATTACA 59.726 41.667 1.33 0.00 34.44 2.41
1644 1662 5.266242 GCTGAAAAATATAGTGTTGAGCCG 58.734 41.667 3.46 0.00 0.00 5.52
1659 1677 2.158623 TGAGCCGGAAATGGAGCATTAT 60.159 45.455 5.05 0.00 32.43 1.28
1683 1701 2.877168 CTGCATGGTTGATCTTCTAGGC 59.123 50.000 0.00 0.00 0.00 3.93
1773 1791 2.184579 GGCACTGTACTCTCGGCC 59.815 66.667 0.00 0.00 0.00 6.13
1804 1822 3.256960 GCCTGGTGGACTTGGGGA 61.257 66.667 0.00 0.00 34.57 4.81
1875 1893 5.431765 CACTATGTCCTCCTTGCAAGTATT 58.568 41.667 24.35 5.33 0.00 1.89
1881 1899 4.036852 GTCCTCCTTGCAAGTATTTATGCC 59.963 45.833 24.35 0.57 41.87 4.40
2009 2027 6.975772 GTGCATAAGTTTCTAGTAGGAGACAG 59.024 42.308 0.00 0.00 0.00 3.51
2010 2028 6.890268 TGCATAAGTTTCTAGTAGGAGACAGA 59.110 38.462 0.00 0.00 0.00 3.41
2082 2100 0.921896 AGTTGGCAGATGCAGGGTAT 59.078 50.000 7.19 0.00 44.36 2.73
2091 2109 6.830179 GCAGATGCAGGGTATGTACCAGAG 62.830 54.167 11.11 1.87 43.73 3.35
2097 2115 2.865343 GGTATGTACCAGAGGTGTCG 57.135 55.000 4.34 0.00 45.73 4.35
2130 2148 5.356190 GCATGACATTGGAGATGAAGAGAAA 59.644 40.000 0.00 0.00 0.00 2.52
2304 2322 5.222870 AGGGAGATTATTGTGAGAGATGGT 58.777 41.667 0.00 0.00 0.00 3.55
2334 2352 7.943447 AGATTCCATCATATGAAAGAAGGGAAG 59.057 37.037 19.59 1.74 35.86 3.46
2399 2421 9.476761 GTTTTTGTTGTTGAATTCAGTCATTTC 57.523 29.630 8.41 7.02 0.00 2.17
2401 2423 6.130298 TGTTGTTGAATTCAGTCATTTCGT 57.870 33.333 8.41 0.00 0.00 3.85
2425 2447 7.639113 TTGGAGTCAACAGTAATGTTCTTTT 57.361 32.000 5.41 0.00 0.00 2.27
2426 2448 7.639113 TGGAGTCAACAGTAATGTTCTTTTT 57.361 32.000 5.41 0.00 0.00 1.94
2448 2470 4.904253 TTTTTCCGGGAAAACACAGTAG 57.096 40.909 29.52 0.00 40.56 2.57
2449 2471 3.564053 TTTCCGGGAAAACACAGTAGT 57.436 42.857 19.53 0.00 0.00 2.73
2450 2472 3.564053 TTCCGGGAAAACACAGTAGTT 57.436 42.857 7.09 0.00 0.00 2.24
2451 2473 3.564053 TCCGGGAAAACACAGTAGTTT 57.436 42.857 0.00 0.00 43.13 2.66
2475 2497 7.514573 TTTTCTTTCAGGAAAACGTAAAAGC 57.485 32.000 0.00 0.00 39.37 3.51
2476 2498 5.177725 TCTTTCAGGAAAACGTAAAAGCC 57.822 39.130 0.00 0.00 0.00 4.35
2477 2499 4.885325 TCTTTCAGGAAAACGTAAAAGCCT 59.115 37.500 0.00 0.00 0.00 4.58
2478 2500 5.358725 TCTTTCAGGAAAACGTAAAAGCCTT 59.641 36.000 0.00 0.00 0.00 4.35
2479 2501 4.561735 TCAGGAAAACGTAAAAGCCTTG 57.438 40.909 0.00 0.00 0.00 3.61
2480 2502 3.949113 TCAGGAAAACGTAAAAGCCTTGT 59.051 39.130 0.00 0.00 0.00 3.16
2481 2503 4.041723 CAGGAAAACGTAAAAGCCTTGTG 58.958 43.478 0.00 0.00 0.00 3.33
2482 2504 3.697542 AGGAAAACGTAAAAGCCTTGTGT 59.302 39.130 0.00 0.00 0.00 3.72
2483 2505 4.158949 AGGAAAACGTAAAAGCCTTGTGTT 59.841 37.500 0.00 0.00 0.00 3.32
2484 2506 4.865925 GGAAAACGTAAAAGCCTTGTGTTT 59.134 37.500 0.00 0.00 0.00 2.83
2485 2507 5.005012 GGAAAACGTAAAAGCCTTGTGTTTC 59.995 40.000 0.00 0.00 0.00 2.78
2486 2508 3.328237 ACGTAAAAGCCTTGTGTTTCG 57.672 42.857 0.00 0.00 0.00 3.46
2487 2509 2.937799 ACGTAAAAGCCTTGTGTTTCGA 59.062 40.909 0.00 0.00 0.00 3.71
2488 2510 3.562557 ACGTAAAAGCCTTGTGTTTCGAT 59.437 39.130 0.00 0.00 0.00 3.59
2489 2511 3.906008 CGTAAAAGCCTTGTGTTTCGATG 59.094 43.478 0.00 0.00 0.00 3.84
2490 2512 2.422276 AAAGCCTTGTGTTTCGATGC 57.578 45.000 0.00 0.00 0.00 3.91
2491 2513 1.317613 AAGCCTTGTGTTTCGATGCA 58.682 45.000 0.00 0.00 0.00 3.96
2492 2514 1.538047 AGCCTTGTGTTTCGATGCAT 58.462 45.000 0.00 0.00 0.00 3.96
2493 2515 1.888512 AGCCTTGTGTTTCGATGCATT 59.111 42.857 0.00 0.00 0.00 3.56
2494 2516 1.987770 GCCTTGTGTTTCGATGCATTG 59.012 47.619 7.70 7.70 0.00 2.82
2495 2517 2.351641 GCCTTGTGTTTCGATGCATTGA 60.352 45.455 12.88 12.88 0.00 2.57
2496 2518 3.674138 GCCTTGTGTTTCGATGCATTGAT 60.674 43.478 17.46 0.00 0.00 2.57
2497 2519 4.438608 GCCTTGTGTTTCGATGCATTGATA 60.439 41.667 17.46 10.13 0.00 2.15
2498 2520 5.268544 CCTTGTGTTTCGATGCATTGATAG 58.731 41.667 17.46 8.14 0.00 2.08
2499 2521 5.065090 CCTTGTGTTTCGATGCATTGATAGA 59.935 40.000 17.46 8.68 0.00 1.98
2500 2522 6.403527 CCTTGTGTTTCGATGCATTGATAGAA 60.404 38.462 17.46 6.46 0.00 2.10
2501 2523 6.110543 TGTGTTTCGATGCATTGATAGAAG 57.889 37.500 17.46 0.00 0.00 2.85
2502 2524 5.874261 TGTGTTTCGATGCATTGATAGAAGA 59.126 36.000 17.46 5.15 0.00 2.87
2503 2525 6.539826 TGTGTTTCGATGCATTGATAGAAGAT 59.460 34.615 17.46 0.00 0.00 2.40
2504 2526 7.710475 TGTGTTTCGATGCATTGATAGAAGATA 59.290 33.333 17.46 3.77 0.00 1.98
2505 2527 8.551205 GTGTTTCGATGCATTGATAGAAGATAA 58.449 33.333 17.46 3.60 0.00 1.75
2506 2528 8.768019 TGTTTCGATGCATTGATAGAAGATAAG 58.232 33.333 17.46 0.00 0.00 1.73
2507 2529 8.982685 GTTTCGATGCATTGATAGAAGATAAGA 58.017 33.333 17.46 0.00 0.00 2.10
2508 2530 8.754230 TTCGATGCATTGATAGAAGATAAGAG 57.246 34.615 17.46 0.00 0.00 2.85
2509 2531 7.890515 TCGATGCATTGATAGAAGATAAGAGT 58.109 34.615 12.88 0.00 0.00 3.24
2510 2532 8.363390 TCGATGCATTGATAGAAGATAAGAGTT 58.637 33.333 12.88 0.00 0.00 3.01
2511 2533 8.986847 CGATGCATTGATAGAAGATAAGAGTTT 58.013 33.333 8.37 0.00 0.00 2.66
2513 2535 9.624373 ATGCATTGATAGAAGATAAGAGTTTGT 57.376 29.630 0.00 0.00 0.00 2.83
2523 2545 8.861086 AGAAGATAAGAGTTTGTACAAGTCAGA 58.139 33.333 17.64 8.63 0.00 3.27
2524 2546 9.134734 GAAGATAAGAGTTTGTACAAGTCAGAG 57.865 37.037 17.64 0.00 0.00 3.35
2525 2547 8.410673 AGATAAGAGTTTGTACAAGTCAGAGA 57.589 34.615 17.64 0.00 0.00 3.10
2526 2548 8.519526 AGATAAGAGTTTGTACAAGTCAGAGAG 58.480 37.037 17.64 0.00 0.00 3.20
2527 2549 5.461032 AGAGTTTGTACAAGTCAGAGAGG 57.539 43.478 17.64 0.00 0.00 3.69
2528 2550 4.282195 AGAGTTTGTACAAGTCAGAGAGGG 59.718 45.833 17.64 0.00 0.00 4.30
2529 2551 3.067833 GTTTGTACAAGTCAGAGAGGGC 58.932 50.000 8.56 0.00 0.00 5.19
2530 2552 2.009681 TGTACAAGTCAGAGAGGGCA 57.990 50.000 0.00 0.00 0.00 5.36
2531 2553 1.618837 TGTACAAGTCAGAGAGGGCAC 59.381 52.381 0.00 0.00 0.00 5.01
2532 2554 1.618837 GTACAAGTCAGAGAGGGCACA 59.381 52.381 0.00 0.00 0.00 4.57
2533 2555 0.683973 ACAAGTCAGAGAGGGCACAG 59.316 55.000 0.00 0.00 0.00 3.66
2534 2556 0.673022 CAAGTCAGAGAGGGCACAGC 60.673 60.000 0.00 0.00 0.00 4.40
2535 2557 0.835543 AAGTCAGAGAGGGCACAGCT 60.836 55.000 0.00 0.00 0.00 4.24
2536 2558 0.040351 AGTCAGAGAGGGCACAGCTA 59.960 55.000 0.00 0.00 0.00 3.32
2537 2559 0.459489 GTCAGAGAGGGCACAGCTAG 59.541 60.000 0.00 0.00 0.00 3.42
2538 2560 0.332972 TCAGAGAGGGCACAGCTAGA 59.667 55.000 0.00 0.00 0.00 2.43
2539 2561 0.746063 CAGAGAGGGCACAGCTAGAG 59.254 60.000 0.00 0.00 0.00 2.43
2540 2562 0.334676 AGAGAGGGCACAGCTAGAGT 59.665 55.000 0.00 0.00 0.00 3.24
2541 2563 0.459489 GAGAGGGCACAGCTAGAGTG 59.541 60.000 10.43 10.43 39.92 3.51
2542 2564 0.040351 AGAGGGCACAGCTAGAGTGA 59.960 55.000 16.98 0.00 39.30 3.41
2543 2565 0.174617 GAGGGCACAGCTAGAGTGAC 59.825 60.000 16.98 14.53 44.35 3.67
2544 2566 0.542938 AGGGCACAGCTAGAGTGACA 60.543 55.000 19.42 0.00 46.90 3.58
2545 2567 0.321671 GGGCACAGCTAGAGTGACAA 59.678 55.000 19.42 0.00 46.90 3.18
2546 2568 1.433534 GGCACAGCTAGAGTGACAAC 58.566 55.000 16.98 2.49 44.47 3.32
2547 2569 1.063806 GCACAGCTAGAGTGACAACG 58.936 55.000 16.98 0.00 39.30 4.10
2548 2570 1.603172 GCACAGCTAGAGTGACAACGT 60.603 52.381 16.98 0.00 39.30 3.99
2549 2571 2.054363 CACAGCTAGAGTGACAACGTG 58.946 52.381 9.44 0.00 39.30 4.49
2550 2572 1.954382 ACAGCTAGAGTGACAACGTGA 59.046 47.619 0.00 0.00 0.00 4.35
2551 2573 2.558795 ACAGCTAGAGTGACAACGTGAT 59.441 45.455 0.00 0.00 0.00 3.06
2552 2574 2.919859 CAGCTAGAGTGACAACGTGATG 59.080 50.000 0.00 0.00 0.00 3.07
2553 2575 2.094494 AGCTAGAGTGACAACGTGATGG 60.094 50.000 0.00 0.00 0.00 3.51
2554 2576 2.263077 CTAGAGTGACAACGTGATGGC 58.737 52.381 0.00 0.00 0.00 4.40
2555 2577 0.320771 AGAGTGACAACGTGATGGCC 60.321 55.000 0.00 0.00 0.00 5.36
2556 2578 1.298859 GAGTGACAACGTGATGGCCC 61.299 60.000 0.00 0.00 0.00 5.80
2557 2579 1.599518 GTGACAACGTGATGGCCCA 60.600 57.895 0.00 0.00 0.00 5.36
2558 2580 1.149401 TGACAACGTGATGGCCCAA 59.851 52.632 0.00 0.00 0.00 4.12
2559 2581 0.888736 TGACAACGTGATGGCCCAAG 60.889 55.000 0.00 0.00 0.00 3.61
2560 2582 2.200170 GACAACGTGATGGCCCAAGC 62.200 60.000 0.00 0.00 38.76 4.01
2570 2592 4.303257 GCCCAAGCCACTAGACAC 57.697 61.111 0.00 0.00 0.00 3.67
2571 2593 1.377333 GCCCAAGCCACTAGACACC 60.377 63.158 0.00 0.00 0.00 4.16
2572 2594 2.066340 CCCAAGCCACTAGACACCA 58.934 57.895 0.00 0.00 0.00 4.17
2573 2595 0.321653 CCCAAGCCACTAGACACCAC 60.322 60.000 0.00 0.00 0.00 4.16
2574 2596 0.321653 CCAAGCCACTAGACACCACC 60.322 60.000 0.00 0.00 0.00 4.61
2575 2597 0.687354 CAAGCCACTAGACACCACCT 59.313 55.000 0.00 0.00 0.00 4.00
2576 2598 0.687354 AAGCCACTAGACACCACCTG 59.313 55.000 0.00 0.00 0.00 4.00
2577 2599 1.376037 GCCACTAGACACCACCTGC 60.376 63.158 0.00 0.00 0.00 4.85
2578 2600 2.057830 CCACTAGACACCACCTGCA 58.942 57.895 0.00 0.00 0.00 4.41
2579 2601 0.320771 CCACTAGACACCACCTGCAC 60.321 60.000 0.00 0.00 0.00 4.57
2580 2602 0.392706 CACTAGACACCACCTGCACA 59.607 55.000 0.00 0.00 0.00 4.57
2581 2603 0.681733 ACTAGACACCACCTGCACAG 59.318 55.000 0.00 0.00 0.00 3.66
2582 2604 0.671781 CTAGACACCACCTGCACAGC 60.672 60.000 0.00 0.00 0.00 4.40
2583 2605 2.111999 TAGACACCACCTGCACAGCC 62.112 60.000 0.00 0.00 0.00 4.85
2584 2606 4.935495 ACACCACCTGCACAGCCG 62.935 66.667 0.00 0.00 0.00 5.52
2588 2610 3.594775 CACCTGCACAGCCGCAAA 61.595 61.111 0.00 0.00 42.45 3.68
2589 2611 2.832661 ACCTGCACAGCCGCAAAA 60.833 55.556 0.00 0.00 42.45 2.44
2590 2612 2.355009 CCTGCACAGCCGCAAAAC 60.355 61.111 0.00 0.00 42.45 2.43
2591 2613 2.355009 CTGCACAGCCGCAAAACC 60.355 61.111 0.00 0.00 42.45 3.27
2592 2614 2.832661 TGCACAGCCGCAAAACCT 60.833 55.556 0.00 0.00 39.45 3.50
2593 2615 2.050077 GCACAGCCGCAAAACCTC 60.050 61.111 0.00 0.00 0.00 3.85
2594 2616 2.555547 GCACAGCCGCAAAACCTCT 61.556 57.895 0.00 0.00 0.00 3.69
2595 2617 2.032981 CACAGCCGCAAAACCTCTT 58.967 52.632 0.00 0.00 0.00 2.85
2596 2618 0.318107 CACAGCCGCAAAACCTCTTG 60.318 55.000 0.00 0.00 0.00 3.02
2597 2619 1.372128 CAGCCGCAAAACCTCTTGC 60.372 57.895 0.00 0.00 46.70 4.01
2601 2623 2.049156 GCAAAACCTCTTGCGCCC 60.049 61.111 4.18 0.00 42.09 6.13
2602 2624 2.255252 CAAAACCTCTTGCGCCCG 59.745 61.111 4.18 0.00 0.00 6.13
2603 2625 3.670377 AAAACCTCTTGCGCCCGC 61.670 61.111 4.18 5.60 42.35 6.13
2620 2642 4.704833 CCGTCACCCACTGCCTGG 62.705 72.222 0.00 0.00 40.26 4.45
2622 2644 3.958860 GTCACCCACTGCCTGGCT 61.959 66.667 21.03 0.00 39.01 4.75
2623 2645 3.177884 TCACCCACTGCCTGGCTT 61.178 61.111 21.03 3.67 39.01 4.35
2624 2646 2.674380 CACCCACTGCCTGGCTTC 60.674 66.667 21.03 0.00 39.01 3.86
2625 2647 3.971702 ACCCACTGCCTGGCTTCC 61.972 66.667 21.03 0.00 39.01 3.46
2627 2649 4.020617 CCACTGCCTGGCTTCCGA 62.021 66.667 21.03 0.00 31.36 4.55
2628 2650 2.743928 CACTGCCTGGCTTCCGAC 60.744 66.667 21.03 0.00 0.00 4.79
2629 2651 2.925170 ACTGCCTGGCTTCCGACT 60.925 61.111 21.03 0.00 0.00 4.18
2630 2652 2.348998 CTGCCTGGCTTCCGACTT 59.651 61.111 21.03 0.00 0.00 3.01
2631 2653 2.032528 TGCCTGGCTTCCGACTTG 59.967 61.111 21.03 0.00 0.00 3.16
2632 2654 2.347490 GCCTGGCTTCCGACTTGA 59.653 61.111 12.43 0.00 0.00 3.02
2633 2655 1.078143 GCCTGGCTTCCGACTTGAT 60.078 57.895 12.43 0.00 0.00 2.57
2634 2656 1.372087 GCCTGGCTTCCGACTTGATG 61.372 60.000 12.43 0.00 0.00 3.07
2635 2657 0.250234 CCTGGCTTCCGACTTGATGA 59.750 55.000 0.00 0.00 0.00 2.92
2636 2658 1.134280 CCTGGCTTCCGACTTGATGAT 60.134 52.381 0.00 0.00 0.00 2.45
2637 2659 2.636830 CTGGCTTCCGACTTGATGATT 58.363 47.619 0.00 0.00 0.00 2.57
2638 2660 2.353889 CTGGCTTCCGACTTGATGATTG 59.646 50.000 0.00 0.00 0.00 2.67
2639 2661 1.064654 GGCTTCCGACTTGATGATTGC 59.935 52.381 0.00 0.00 0.00 3.56
2640 2662 1.267732 GCTTCCGACTTGATGATTGCG 60.268 52.381 0.00 0.00 0.00 4.85
2641 2663 2.002586 CTTCCGACTTGATGATTGCGT 58.997 47.619 0.00 0.00 0.00 5.24
2642 2664 2.093306 TCCGACTTGATGATTGCGTT 57.907 45.000 0.00 0.00 0.00 4.84
2643 2665 1.731709 TCCGACTTGATGATTGCGTTG 59.268 47.619 0.00 0.00 0.00 4.10
2644 2666 1.527696 CGACTTGATGATTGCGTTGC 58.472 50.000 0.00 0.00 0.00 4.17
2645 2667 1.136000 CGACTTGATGATTGCGTTGCA 60.136 47.619 0.00 0.00 36.47 4.08
2646 2668 2.512885 GACTTGATGATTGCGTTGCAG 58.487 47.619 0.00 0.00 40.61 4.41
2647 2669 1.881973 ACTTGATGATTGCGTTGCAGT 59.118 42.857 0.00 0.00 40.61 4.40
2648 2670 2.247637 CTTGATGATTGCGTTGCAGTG 58.752 47.619 0.00 0.00 40.61 3.66
2649 2671 0.109643 TGATGATTGCGTTGCAGTGC 60.110 50.000 8.58 8.58 40.61 4.40
2650 2672 0.169672 GATGATTGCGTTGCAGTGCT 59.830 50.000 17.60 0.00 40.61 4.40
2651 2673 0.599558 ATGATTGCGTTGCAGTGCTT 59.400 45.000 17.60 1.83 40.61 3.91
2652 2674 0.040157 TGATTGCGTTGCAGTGCTTC 60.040 50.000 17.60 8.26 40.61 3.86
2653 2675 0.730494 GATTGCGTTGCAGTGCTTCC 60.730 55.000 17.60 2.96 40.61 3.46
2654 2676 1.454572 ATTGCGTTGCAGTGCTTCCA 61.455 50.000 17.60 5.50 40.61 3.53
2655 2677 2.062361 TTGCGTTGCAGTGCTTCCAG 62.062 55.000 17.60 4.60 40.61 3.86
2656 2678 2.253758 GCGTTGCAGTGCTTCCAGA 61.254 57.895 17.60 0.00 0.00 3.86
2657 2679 1.785041 GCGTTGCAGTGCTTCCAGAA 61.785 55.000 17.60 0.00 0.00 3.02
2658 2680 0.877071 CGTTGCAGTGCTTCCAGAAT 59.123 50.000 17.60 0.00 0.00 2.40
2659 2681 1.135859 CGTTGCAGTGCTTCCAGAATC 60.136 52.381 17.60 0.00 0.00 2.52
2660 2682 1.881973 GTTGCAGTGCTTCCAGAATCA 59.118 47.619 17.60 0.00 0.00 2.57
2661 2683 1.527034 TGCAGTGCTTCCAGAATCAC 58.473 50.000 17.60 6.31 37.61 3.06
2662 2684 0.807496 GCAGTGCTTCCAGAATCACC 59.193 55.000 8.18 0.00 37.96 4.02
2663 2685 1.883638 GCAGTGCTTCCAGAATCACCA 60.884 52.381 8.18 0.00 37.96 4.17
2664 2686 2.719739 CAGTGCTTCCAGAATCACCAT 58.280 47.619 10.00 0.00 37.96 3.55
2665 2687 2.422479 CAGTGCTTCCAGAATCACCATG 59.578 50.000 10.00 1.35 37.96 3.66
2666 2688 1.133790 GTGCTTCCAGAATCACCATGC 59.866 52.381 3.53 0.00 32.89 4.06
2667 2689 0.743097 GCTTCCAGAATCACCATGCC 59.257 55.000 0.00 0.00 0.00 4.40
2668 2690 1.956636 GCTTCCAGAATCACCATGCCA 60.957 52.381 0.00 0.00 0.00 4.92
2669 2691 1.747355 CTTCCAGAATCACCATGCCAC 59.253 52.381 0.00 0.00 0.00 5.01
2670 2692 0.034186 TCCAGAATCACCATGCCACC 60.034 55.000 0.00 0.00 0.00 4.61
2671 2693 0.323633 CCAGAATCACCATGCCACCA 60.324 55.000 0.00 0.00 0.00 4.17
2672 2694 1.548081 CAGAATCACCATGCCACCAA 58.452 50.000 0.00 0.00 0.00 3.67
2673 2695 1.203052 CAGAATCACCATGCCACCAAC 59.797 52.381 0.00 0.00 0.00 3.77
2674 2696 1.203038 AGAATCACCATGCCACCAACA 60.203 47.619 0.00 0.00 0.00 3.33
2675 2697 1.826720 GAATCACCATGCCACCAACAT 59.173 47.619 0.00 0.00 0.00 2.71
2676 2698 1.187974 ATCACCATGCCACCAACATG 58.812 50.000 0.00 0.00 43.67 3.21
2677 2699 0.112025 TCACCATGCCACCAACATGA 59.888 50.000 0.00 0.00 46.33 3.07
2678 2700 1.187974 CACCATGCCACCAACATGAT 58.812 50.000 0.00 0.00 46.33 2.45
2679 2701 1.134936 CACCATGCCACCAACATGATG 60.135 52.381 0.00 0.00 46.33 3.07
2680 2702 0.462375 CCATGCCACCAACATGATGG 59.538 55.000 19.73 19.73 46.33 3.51
2683 2705 4.438255 CCACCAACATGATGGCCA 57.562 55.556 21.09 8.56 44.75 5.36
2684 2706 2.668612 CCACCAACATGATGGCCAA 58.331 52.632 21.09 0.00 44.75 4.52
2685 2707 0.533491 CCACCAACATGATGGCCAAG 59.467 55.000 21.09 9.18 44.75 3.61
2686 2708 0.533491 CACCAACATGATGGCCAAGG 59.467 55.000 21.09 0.00 44.75 3.61
2687 2709 0.409092 ACCAACATGATGGCCAAGGA 59.591 50.000 21.09 0.00 44.75 3.36
2688 2710 0.819582 CCAACATGATGGCCAAGGAC 59.180 55.000 10.96 2.24 32.78 3.85
2689 2711 0.452987 CAACATGATGGCCAAGGACG 59.547 55.000 10.96 0.00 0.00 4.79
2690 2712 0.038166 AACATGATGGCCAAGGACGT 59.962 50.000 10.96 0.05 0.00 4.34
2691 2713 0.677731 ACATGATGGCCAAGGACGTG 60.678 55.000 10.96 15.34 0.00 4.49
2692 2714 1.750399 ATGATGGCCAAGGACGTGC 60.750 57.895 10.96 0.00 0.00 5.34
2693 2715 3.134127 GATGGCCAAGGACGTGCC 61.134 66.667 10.96 5.00 45.56 5.01
2694 2716 4.740822 ATGGCCAAGGACGTGCCC 62.741 66.667 10.96 2.43 44.72 5.36
2696 2718 4.660938 GGCCAAGGACGTGCCCTT 62.661 66.667 2.38 2.60 46.91 3.95
2697 2719 3.056328 GCCAAGGACGTGCCCTTC 61.056 66.667 2.38 0.00 44.30 3.46
2698 2720 2.359975 CCAAGGACGTGCCCTTCC 60.360 66.667 2.38 0.00 44.30 3.46
2699 2721 2.742372 CAAGGACGTGCCCTTCCG 60.742 66.667 2.38 0.00 44.30 4.30
2700 2722 2.920912 AAGGACGTGCCCTTCCGA 60.921 61.111 2.38 0.00 42.62 4.55
2701 2723 2.943978 AAGGACGTGCCCTTCCGAG 61.944 63.158 2.38 0.00 42.62 4.63
2705 2727 4.514577 CGTGCCCTTCCGAGCGAT 62.515 66.667 0.00 0.00 0.00 4.58
2706 2728 2.892425 GTGCCCTTCCGAGCGATG 60.892 66.667 0.00 0.00 0.00 3.84
2707 2729 3.390521 TGCCCTTCCGAGCGATGT 61.391 61.111 0.00 0.00 0.00 3.06
2708 2730 2.125106 GCCCTTCCGAGCGATGTT 60.125 61.111 0.00 0.00 0.00 2.71
2709 2731 2.174319 GCCCTTCCGAGCGATGTTC 61.174 63.158 0.00 0.00 0.00 3.18
2710 2732 1.878522 CCCTTCCGAGCGATGTTCG 60.879 63.158 0.00 0.00 43.89 3.95
2715 2737 3.923614 CGAGCGATGTTCGGGATC 58.076 61.111 0.00 0.00 40.84 3.36
2716 2738 1.065764 CGAGCGATGTTCGGGATCA 59.934 57.895 0.00 0.00 40.84 2.92
2717 2739 0.527600 CGAGCGATGTTCGGGATCAA 60.528 55.000 0.00 0.00 40.84 2.57
2718 2740 1.212616 GAGCGATGTTCGGGATCAAG 58.787 55.000 0.00 0.00 40.84 3.02
2719 2741 0.537188 AGCGATGTTCGGGATCAAGT 59.463 50.000 0.00 0.00 40.84 3.16
2720 2742 0.652592 GCGATGTTCGGGATCAAGTG 59.347 55.000 0.00 0.00 40.84 3.16
2721 2743 1.290203 CGATGTTCGGGATCAAGTGG 58.710 55.000 0.00 0.00 36.00 4.00
2722 2744 1.017387 GATGTTCGGGATCAAGTGGC 58.983 55.000 0.00 0.00 0.00 5.01
2723 2745 0.327924 ATGTTCGGGATCAAGTGGCA 59.672 50.000 0.00 0.00 0.00 4.92
2724 2746 0.327924 TGTTCGGGATCAAGTGGCAT 59.672 50.000 0.00 0.00 0.00 4.40
2725 2747 0.734889 GTTCGGGATCAAGTGGCATG 59.265 55.000 0.00 0.00 0.00 4.06
2726 2748 0.327924 TTCGGGATCAAGTGGCATGT 59.672 50.000 0.00 0.00 0.00 3.21
2727 2749 0.107703 TCGGGATCAAGTGGCATGTC 60.108 55.000 0.00 0.00 0.00 3.06
2728 2750 1.097547 CGGGATCAAGTGGCATGTCC 61.098 60.000 0.00 0.00 0.00 4.02
2729 2751 0.034186 GGGATCAAGTGGCATGTCCA 60.034 55.000 4.93 4.93 44.18 4.02
2738 2760 3.697424 GCATGTCCAATGCCACCA 58.303 55.556 0.00 0.00 39.01 4.17
2739 2761 1.514087 GCATGTCCAATGCCACCAG 59.486 57.895 0.00 0.00 39.01 4.00
2740 2762 1.252904 GCATGTCCAATGCCACCAGT 61.253 55.000 0.00 0.00 39.01 4.00
2741 2763 0.813184 CATGTCCAATGCCACCAGTC 59.187 55.000 0.00 0.00 0.00 3.51
2742 2764 0.323725 ATGTCCAATGCCACCAGTCC 60.324 55.000 0.00 0.00 0.00 3.85
2743 2765 1.074775 GTCCAATGCCACCAGTCCA 59.925 57.895 0.00 0.00 0.00 4.02
2744 2766 1.074775 TCCAATGCCACCAGTCCAC 59.925 57.895 0.00 0.00 0.00 4.02
2745 2767 1.228521 CCAATGCCACCAGTCCACA 60.229 57.895 0.00 0.00 0.00 4.17
2746 2768 0.827089 CCAATGCCACCAGTCCACAA 60.827 55.000 0.00 0.00 0.00 3.33
2747 2769 1.039068 CAATGCCACCAGTCCACAAA 58.961 50.000 0.00 0.00 0.00 2.83
2748 2770 1.000060 CAATGCCACCAGTCCACAAAG 60.000 52.381 0.00 0.00 0.00 2.77
2749 2771 0.185901 ATGCCACCAGTCCACAAAGT 59.814 50.000 0.00 0.00 0.00 2.66
2750 2772 0.465460 TGCCACCAGTCCACAAAGTC 60.465 55.000 0.00 0.00 0.00 3.01
2751 2773 1.507141 GCCACCAGTCCACAAAGTCG 61.507 60.000 0.00 0.00 0.00 4.18
2752 2774 0.179056 CCACCAGTCCACAAAGTCGT 60.179 55.000 0.00 0.00 0.00 4.34
2753 2775 1.217882 CACCAGTCCACAAAGTCGTC 58.782 55.000 0.00 0.00 0.00 4.20
2754 2776 0.106149 ACCAGTCCACAAAGTCGTCC 59.894 55.000 0.00 0.00 0.00 4.79
2755 2777 0.393077 CCAGTCCACAAAGTCGTCCT 59.607 55.000 0.00 0.00 0.00 3.85
2756 2778 1.202651 CCAGTCCACAAAGTCGTCCTT 60.203 52.381 0.00 0.00 33.79 3.36
2757 2779 2.135933 CAGTCCACAAAGTCGTCCTTC 58.864 52.381 0.00 0.00 31.27 3.46
2758 2780 1.070289 AGTCCACAAAGTCGTCCTTCC 59.930 52.381 0.00 0.00 31.27 3.46
2759 2781 0.032952 TCCACAAAGTCGTCCTTCCG 59.967 55.000 0.00 0.00 31.27 4.30
2760 2782 0.032952 CCACAAAGTCGTCCTTCCGA 59.967 55.000 0.00 0.00 31.27 4.55
2761 2783 1.419374 CACAAAGTCGTCCTTCCGAG 58.581 55.000 0.00 0.00 37.56 4.63
2762 2784 0.319641 ACAAAGTCGTCCTTCCGAGC 60.320 55.000 0.00 0.00 37.56 5.03
2763 2785 0.038159 CAAAGTCGTCCTTCCGAGCT 60.038 55.000 0.00 0.00 37.56 4.09
2764 2786 0.038159 AAAGTCGTCCTTCCGAGCTG 60.038 55.000 0.00 0.00 37.56 4.24
2765 2787 0.894184 AAGTCGTCCTTCCGAGCTGA 60.894 55.000 0.00 0.00 37.56 4.26
2766 2788 1.153997 GTCGTCCTTCCGAGCTGAC 60.154 63.158 0.00 0.00 37.56 3.51
2767 2789 1.602605 TCGTCCTTCCGAGCTGACA 60.603 57.895 0.00 0.00 32.18 3.58
2768 2790 1.153939 CGTCCTTCCGAGCTGACAG 60.154 63.158 0.00 0.00 0.00 3.51
2769 2791 1.867919 CGTCCTTCCGAGCTGACAGT 61.868 60.000 3.99 0.00 0.00 3.55
2789 2811 5.530915 ACAGTAATGTTCTAGTTTGCAGCAA 59.469 36.000 2.83 2.83 0.00 3.91
2802 2824 3.254470 TGCAGCAAATCCCAATTCATG 57.746 42.857 0.00 0.00 0.00 3.07
2840 4063 2.346766 TGCAGTCATGGACAGTTGTT 57.653 45.000 0.00 0.00 34.60 2.83
2875 4098 9.928236 GTAAGAGATATGTTTTCATCTTTCTGC 57.072 33.333 0.00 0.00 41.25 4.26
2884 4107 5.673337 TTTCATCTTTCTGCACACTACAC 57.327 39.130 0.00 0.00 0.00 2.90
2904 4127 8.978472 ACTACACTTAAGTTTATCCTGATAGCA 58.022 33.333 5.07 0.00 0.00 3.49
2905 4128 9.817809 CTACACTTAAGTTTATCCTGATAGCAA 57.182 33.333 5.07 0.00 0.00 3.91
2916 4140 8.635765 TTATCCTGATAGCAAAACCATAATCC 57.364 34.615 0.00 0.00 0.00 3.01
2950 4181 5.947228 TCACATTCACTCATTTTCTGTCC 57.053 39.130 0.00 0.00 0.00 4.02
2953 4184 6.205464 TCACATTCACTCATTTTCTGTCCTTC 59.795 38.462 0.00 0.00 0.00 3.46
2980 4211 1.315690 CGGCTTCCGTCCTACTGATA 58.684 55.000 0.00 0.00 42.73 2.15
2981 4212 1.887198 CGGCTTCCGTCCTACTGATAT 59.113 52.381 0.00 0.00 42.73 1.63
3006 4237 4.908601 TCCCGCATGATGATACCTTAAT 57.091 40.909 0.00 0.00 0.00 1.40
3036 4267 1.902508 AGCAGCAAGTACCTTCAGCTA 59.097 47.619 0.00 0.00 33.59 3.32
3069 4300 2.054232 AGGCTGCATTCTCTTCATGG 57.946 50.000 0.50 0.00 0.00 3.66
3070 4301 1.284198 AGGCTGCATTCTCTTCATGGT 59.716 47.619 0.50 0.00 0.00 3.55
3071 4302 1.404391 GGCTGCATTCTCTTCATGGTG 59.596 52.381 0.50 0.00 0.00 4.17
3072 4303 1.202268 GCTGCATTCTCTTCATGGTGC 60.202 52.381 0.00 0.00 0.00 5.01
3073 4304 1.063616 CTGCATTCTCTTCATGGTGCG 59.936 52.381 0.00 0.00 35.46 5.34
3074 4305 1.338960 TGCATTCTCTTCATGGTGCGA 60.339 47.619 0.00 0.00 35.46 5.10
3075 4306 1.945394 GCATTCTCTTCATGGTGCGAT 59.055 47.619 0.00 0.00 0.00 4.58
3076 4307 2.286831 GCATTCTCTTCATGGTGCGATG 60.287 50.000 0.00 0.00 0.00 3.84
3077 4308 1.372582 TTCTCTTCATGGTGCGATGC 58.627 50.000 0.00 0.00 0.00 3.91
3078 4309 0.462581 TCTCTTCATGGTGCGATGCC 60.463 55.000 0.00 0.00 0.00 4.40
3079 4310 0.745486 CTCTTCATGGTGCGATGCCA 60.745 55.000 0.00 0.00 40.68 4.92
3082 4313 1.948834 CTTCATGGTGCGATGCCAATA 59.051 47.619 0.00 0.00 39.72 1.90
3094 4336 4.034279 GCGATGCCAATAACAAATGCATTT 59.966 37.500 18.99 18.99 42.33 2.32
3109 4351 5.854010 ATGCATTTGCTTGATCTCTTCAT 57.146 34.783 3.94 0.00 42.66 2.57
3116 4358 6.555812 TTGCTTGATCTCTTCATATCATGC 57.444 37.500 13.29 13.29 45.97 4.06
3118 4360 6.745159 GCTTGATCTCTTCATATCATGCAT 57.255 37.500 14.60 0.00 45.49 3.96
3119 4361 6.777101 GCTTGATCTCTTCATATCATGCATC 58.223 40.000 14.60 0.00 45.49 3.91
3144 4386 0.535335 ATCAGCTTGCAATGCCCTTG 59.465 50.000 14.63 8.84 37.80 3.61
3150 4392 1.342174 CTTGCAATGCCCTTGTTCAGT 59.658 47.619 1.53 0.00 37.18 3.41
3151 4393 1.412079 TGCAATGCCCTTGTTCAGTT 58.588 45.000 1.53 0.00 37.18 3.16
3152 4394 1.068895 TGCAATGCCCTTGTTCAGTTG 59.931 47.619 1.53 0.00 37.18 3.16
3153 4395 1.069049 GCAATGCCCTTGTTCAGTTGT 59.931 47.619 0.00 0.00 37.18 3.32
3154 4396 2.295909 GCAATGCCCTTGTTCAGTTGTA 59.704 45.455 0.00 0.00 37.18 2.41
3155 4397 3.243704 GCAATGCCCTTGTTCAGTTGTAA 60.244 43.478 0.00 0.00 37.18 2.41
3156 4398 4.549458 CAATGCCCTTGTTCAGTTGTAAG 58.451 43.478 0.00 0.00 0.00 2.34
3157 4399 3.290948 TGCCCTTGTTCAGTTGTAAGT 57.709 42.857 0.00 0.00 0.00 2.24
3158 4400 3.626930 TGCCCTTGTTCAGTTGTAAGTT 58.373 40.909 0.00 0.00 0.00 2.66
3159 4401 3.630312 TGCCCTTGTTCAGTTGTAAGTTC 59.370 43.478 0.00 0.00 0.00 3.01
3189 4431 6.869913 TGTGTAGAGTTAAGGGATTTACAACG 59.130 38.462 0.00 0.00 0.00 4.10
3197 4439 3.418047 AGGGATTTACAACGGAACTTGG 58.582 45.455 0.00 0.00 0.00 3.61
3218 4460 5.730550 TGGTACAACTAGACATGTTCCATC 58.269 41.667 16.27 0.00 40.62 3.51
3240 4482 9.784531 CCATCATGGACAGAAAATTATACTACT 57.215 33.333 0.00 0.00 40.96 2.57
3301 4543 3.198068 CAGGATTGGACATGGAAGTACG 58.802 50.000 0.00 0.00 0.00 3.67
3307 4549 2.811431 TGGACATGGAAGTACGCTTTTG 59.189 45.455 0.00 0.00 34.61 2.44
3310 4552 2.484264 ACATGGAAGTACGCTTTTGCTC 59.516 45.455 0.00 0.00 44.80 4.26
3322 4564 2.729156 GCTTTTGCTCGTGATGTTAGGC 60.729 50.000 0.00 0.00 43.35 3.93
3335 4577 5.856455 GTGATGTTAGGCATGTTTTACACAC 59.144 40.000 0.00 0.00 38.61 3.82
3344 4586 4.660414 GCATGTTTTACACACGCGAAATTG 60.660 41.667 15.93 2.09 34.30 2.32
3347 4589 5.274718 TGTTTTACACACGCGAAATTGATT 58.725 33.333 15.93 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.375174 ACCCCATTCTTCAGCAGTTACA 59.625 45.455 0.00 0.00 0.00 2.41
1 2 3.073274 ACCCCATTCTTCAGCAGTTAC 57.927 47.619 0.00 0.00 0.00 2.50
2 3 3.420893 CAACCCCATTCTTCAGCAGTTA 58.579 45.455 0.00 0.00 0.00 2.24
3 4 2.242043 CAACCCCATTCTTCAGCAGTT 58.758 47.619 0.00 0.00 0.00 3.16
4 5 1.548582 CCAACCCCATTCTTCAGCAGT 60.549 52.381 0.00 0.00 0.00 4.40
5 6 1.180029 CCAACCCCATTCTTCAGCAG 58.820 55.000 0.00 0.00 0.00 4.24
6 7 0.899717 GCCAACCCCATTCTTCAGCA 60.900 55.000 0.00 0.00 0.00 4.41
7 8 1.893062 GCCAACCCCATTCTTCAGC 59.107 57.895 0.00 0.00 0.00 4.26
8 9 1.315257 CCGCCAACCCCATTCTTCAG 61.315 60.000 0.00 0.00 0.00 3.02
9 10 1.304052 CCGCCAACCCCATTCTTCA 60.304 57.895 0.00 0.00 0.00 3.02
10 11 2.052104 CCCGCCAACCCCATTCTTC 61.052 63.158 0.00 0.00 0.00 2.87
11 12 2.037208 CCCGCCAACCCCATTCTT 59.963 61.111 0.00 0.00 0.00 2.52
12 13 4.060667 CCCCGCCAACCCCATTCT 62.061 66.667 0.00 0.00 0.00 2.40
42 43 3.643978 CTTAGATGCAGCCGCCGC 61.644 66.667 0.00 0.00 37.32 6.53
43 44 2.202932 ACTTAGATGCAGCCGCCG 60.203 61.111 0.00 0.00 37.32 6.46
44 45 0.744414 TTGACTTAGATGCAGCCGCC 60.744 55.000 0.00 0.00 37.32 6.13
45 46 1.003116 CATTGACTTAGATGCAGCCGC 60.003 52.381 0.00 0.00 39.24 6.53
46 47 2.031314 CACATTGACTTAGATGCAGCCG 59.969 50.000 0.00 0.00 0.00 5.52
47 48 2.223433 GCACATTGACTTAGATGCAGCC 60.223 50.000 0.00 0.00 33.27 4.85
48 49 2.421073 TGCACATTGACTTAGATGCAGC 59.579 45.455 0.00 0.00 38.11 5.25
49 50 4.690184 TTGCACATTGACTTAGATGCAG 57.310 40.909 0.00 0.00 43.37 4.41
50 51 4.675933 GCATTGCACATTGACTTAGATGCA 60.676 41.667 3.15 0.00 41.08 3.96
51 52 3.795101 GCATTGCACATTGACTTAGATGC 59.205 43.478 3.15 0.00 0.00 3.91
52 53 4.097437 AGGCATTGCACATTGACTTAGATG 59.903 41.667 11.39 0.00 26.15 2.90
53 54 4.275810 AGGCATTGCACATTGACTTAGAT 58.724 39.130 11.39 0.00 26.15 1.98
54 55 3.689347 AGGCATTGCACATTGACTTAGA 58.311 40.909 11.39 0.00 26.15 2.10
55 56 5.449588 CCTTAGGCATTGCACATTGACTTAG 60.450 44.000 11.39 6.78 32.75 2.18
56 57 4.398988 CCTTAGGCATTGCACATTGACTTA 59.601 41.667 11.39 0.00 32.75 2.24
57 58 3.194116 CCTTAGGCATTGCACATTGACTT 59.806 43.478 11.39 0.00 32.75 3.01
58 59 2.756760 CCTTAGGCATTGCACATTGACT 59.243 45.455 11.39 6.19 34.68 3.41
59 60 2.159198 CCCTTAGGCATTGCACATTGAC 60.159 50.000 11.39 0.00 0.00 3.18
60 61 2.101783 CCCTTAGGCATTGCACATTGA 58.898 47.619 11.39 0.00 0.00 2.57
61 62 2.589798 CCCTTAGGCATTGCACATTG 57.410 50.000 11.39 0.00 0.00 2.82
73 74 2.187946 CAGCGTCTGGCCCTTAGG 59.812 66.667 0.00 0.00 45.17 2.69
74 75 2.512515 GCAGCGTCTGGCCCTTAG 60.513 66.667 0.00 0.00 45.17 2.18
75 76 3.318384 TGCAGCGTCTGGCCCTTA 61.318 61.111 0.00 0.00 45.17 2.69
79 80 1.745115 TAATGTGCAGCGTCTGGCC 60.745 57.895 0.00 0.00 45.17 5.36
80 81 1.298157 TGTAATGTGCAGCGTCTGGC 61.298 55.000 8.57 2.87 44.05 4.85
81 82 1.063027 CATGTAATGTGCAGCGTCTGG 59.937 52.381 8.57 0.00 40.20 3.86
82 83 2.447089 CATGTAATGTGCAGCGTCTG 57.553 50.000 0.00 2.92 40.20 3.51
94 95 1.953559 CTAGGCGCCACACATGTAAT 58.046 50.000 31.54 5.89 0.00 1.89
95 96 0.742990 GCTAGGCGCCACACATGTAA 60.743 55.000 31.54 0.72 0.00 2.41
96 97 1.153449 GCTAGGCGCCACACATGTA 60.153 57.895 31.54 9.35 0.00 2.29
97 98 2.436646 GCTAGGCGCCACACATGT 60.437 61.111 31.54 8.51 0.00 3.21
98 99 2.124983 AGCTAGGCGCCACACATG 60.125 61.111 31.54 12.28 40.39 3.21
99 100 2.187946 GAGCTAGGCGCCACACAT 59.812 61.111 31.54 10.27 40.39 3.21
100 101 2.997315 AGAGCTAGGCGCCACACA 60.997 61.111 31.54 9.67 40.39 3.72
101 102 2.510238 CAGAGCTAGGCGCCACAC 60.510 66.667 31.54 17.11 40.39 3.82
102 103 2.679996 TCAGAGCTAGGCGCCACA 60.680 61.111 31.54 15.42 40.39 4.17
103 104 2.105930 CTCAGAGCTAGGCGCCAC 59.894 66.667 31.54 17.93 40.39 5.01
104 105 3.150335 CCTCAGAGCTAGGCGCCA 61.150 66.667 31.54 14.00 40.39 5.69
113 114 4.756458 AGTGCAGCGCCTCAGAGC 62.756 66.667 2.29 0.00 39.42 4.09
114 115 2.508887 GAGTGCAGCGCCTCAGAG 60.509 66.667 2.29 0.00 0.00 3.35
115 116 4.074526 GGAGTGCAGCGCCTCAGA 62.075 66.667 2.29 0.00 33.96 3.27
116 117 4.079850 AGGAGTGCAGCGCCTCAG 62.080 66.667 2.29 0.00 44.40 3.35
117 118 4.383861 CAGGAGTGCAGCGCCTCA 62.384 66.667 2.29 0.00 44.40 3.86
159 160 2.941333 CGTTGCACAGCTGTCCAG 59.059 61.111 18.64 7.42 0.00 3.86
160 161 3.279116 GCGTTGCACAGCTGTCCA 61.279 61.111 18.64 12.56 0.00 4.02
161 162 4.030452 GGCGTTGCACAGCTGTCC 62.030 66.667 18.64 9.14 0.00 4.02
162 163 2.959357 GAGGCGTTGCACAGCTGTC 61.959 63.158 18.64 12.59 0.00 3.51
163 164 2.974698 GAGGCGTTGCACAGCTGT 60.975 61.111 15.25 15.25 0.00 4.40
164 165 2.962827 CTGAGGCGTTGCACAGCTG 61.963 63.158 13.48 13.48 31.18 4.24
165 166 2.667536 CTGAGGCGTTGCACAGCT 60.668 61.111 11.71 0.00 31.18 4.24
166 167 2.666190 TCTGAGGCGTTGCACAGC 60.666 61.111 4.13 4.13 35.66 4.40
167 168 2.675056 GCTCTGAGGCGTTGCACAG 61.675 63.158 6.83 8.26 36.46 3.66
168 169 1.815817 TAGCTCTGAGGCGTTGCACA 61.816 55.000 6.83 0.00 37.29 4.57
169 170 1.079819 TAGCTCTGAGGCGTTGCAC 60.080 57.895 6.83 0.00 37.29 4.57
170 171 1.216444 CTAGCTCTGAGGCGTTGCA 59.784 57.895 6.83 0.00 37.29 4.08
171 172 1.520342 CCTAGCTCTGAGGCGTTGC 60.520 63.158 6.83 0.00 37.29 4.17
172 173 4.823276 CCTAGCTCTGAGGCGTTG 57.177 61.111 6.83 0.00 37.29 4.10
185 186 0.038526 CCCAACGGTATAGCGCCTAG 60.039 60.000 23.33 10.82 0.00 3.02
186 187 0.756442 ACCCAACGGTATAGCGCCTA 60.756 55.000 23.33 0.00 42.18 3.93
187 188 2.062177 ACCCAACGGTATAGCGCCT 61.062 57.895 23.33 8.86 42.18 5.52
188 189 1.885850 CACCCAACGGTATAGCGCC 60.886 63.158 23.33 0.00 42.04 6.53
189 190 1.153509 ACACCCAACGGTATAGCGC 60.154 57.895 23.33 0.00 42.04 5.92
190 191 0.808453 CCACACCCAACGGTATAGCG 60.808 60.000 21.96 21.96 42.04 4.26
191 192 1.093496 GCCACACCCAACGGTATAGC 61.093 60.000 0.00 0.00 42.04 2.97
192 193 0.808453 CGCCACACCCAACGGTATAG 60.808 60.000 0.00 0.00 42.04 1.31
193 194 1.218585 CGCCACACCCAACGGTATA 59.781 57.895 0.00 0.00 42.04 1.47
194 195 2.046700 CGCCACACCCAACGGTAT 60.047 61.111 0.00 0.00 42.04 2.73
195 196 3.232483 TCGCCACACCCAACGGTA 61.232 61.111 0.00 0.00 42.04 4.02
196 197 4.922026 GTCGCCACACCCAACGGT 62.922 66.667 0.00 0.00 46.31 4.83
197 198 4.920112 TGTCGCCACACCCAACGG 62.920 66.667 0.00 0.00 0.00 4.44
198 199 3.345808 CTGTCGCCACACCCAACG 61.346 66.667 0.00 0.00 0.00 4.10
199 200 3.660111 GCTGTCGCCACACCCAAC 61.660 66.667 0.00 0.00 0.00 3.77
200 201 3.872603 AGCTGTCGCCACACCCAA 61.873 61.111 0.00 0.00 36.60 4.12
201 202 4.624364 CAGCTGTCGCCACACCCA 62.624 66.667 5.25 0.00 36.60 4.51
202 203 4.626081 ACAGCTGTCGCCACACCC 62.626 66.667 15.25 0.00 36.60 4.61
203 204 3.349006 CACAGCTGTCGCCACACC 61.349 66.667 18.64 0.00 36.60 4.16
204 205 4.017877 GCACAGCTGTCGCCACAC 62.018 66.667 18.64 0.00 36.60 3.82
205 206 4.544047 TGCACAGCTGTCGCCACA 62.544 61.111 27.26 15.41 36.60 4.17
206 207 3.279116 TTGCACAGCTGTCGCCAC 61.279 61.111 27.26 13.48 36.60 5.01
207 208 3.279116 GTTGCACAGCTGTCGCCA 61.279 61.111 27.26 19.13 36.60 5.69
208 209 4.374702 CGTTGCACAGCTGTCGCC 62.375 66.667 27.26 16.52 36.60 5.54
210 211 2.754805 GAAGCGTTGCACAGCTGTCG 62.755 60.000 18.64 18.48 43.78 4.35
211 212 1.082496 GAAGCGTTGCACAGCTGTC 60.082 57.895 18.64 12.59 43.78 3.51
212 213 1.779025 CTGAAGCGTTGCACAGCTGT 61.779 55.000 15.25 15.25 43.78 4.40
213 214 1.082300 CTGAAGCGTTGCACAGCTG 60.082 57.895 13.48 13.48 43.78 4.24
214 215 1.226686 CTCTGAAGCGTTGCACAGCT 61.227 55.000 9.11 9.11 46.97 4.24
215 216 1.206072 CTCTGAAGCGTTGCACAGC 59.794 57.895 4.53 4.53 36.09 4.40
216 217 1.206072 GCTCTGAAGCGTTGCACAG 59.794 57.895 8.82 8.82 39.10 3.66
217 218 3.333414 GCTCTGAAGCGTTGCACA 58.667 55.556 0.00 0.00 39.10 4.57
234 235 0.038526 CCCAACGGTATAGCGCCTAG 60.039 60.000 23.33 10.82 0.00 3.02
235 236 0.756442 ACCCAACGGTATAGCGCCTA 60.756 55.000 23.33 0.00 42.18 3.93
236 237 2.062177 ACCCAACGGTATAGCGCCT 61.062 57.895 23.33 8.86 42.18 5.52
237 238 1.885850 CACCCAACGGTATAGCGCC 60.886 63.158 23.33 0.00 42.04 6.53
238 239 1.153509 ACACCCAACGGTATAGCGC 60.154 57.895 23.33 0.00 42.04 5.92
239 240 0.808453 CCACACCCAACGGTATAGCG 60.808 60.000 21.96 21.96 42.04 4.26
240 241 1.093496 GCCACACCCAACGGTATAGC 61.093 60.000 0.00 0.00 42.04 2.97
241 242 0.808453 CGCCACACCCAACGGTATAG 60.808 60.000 0.00 0.00 42.04 1.31
242 243 1.218585 CGCCACACCCAACGGTATA 59.781 57.895 0.00 0.00 42.04 1.47
243 244 2.046700 CGCCACACCCAACGGTAT 60.047 61.111 0.00 0.00 42.04 2.73
244 245 3.518419 GACGCCACACCCAACGGTA 62.518 63.158 0.00 0.00 42.04 4.02
245 246 4.922026 GACGCCACACCCAACGGT 62.922 66.667 0.00 0.00 46.31 4.83
246 247 4.619227 AGACGCCACACCCAACGG 62.619 66.667 0.00 0.00 0.00 4.44
247 248 2.590575 AAGACGCCACACCCAACG 60.591 61.111 0.00 0.00 0.00 4.10
248 249 0.818040 AAGAAGACGCCACACCCAAC 60.818 55.000 0.00 0.00 0.00 3.77
249 250 0.817634 CAAGAAGACGCCACACCCAA 60.818 55.000 0.00 0.00 0.00 4.12
250 251 1.227823 CAAGAAGACGCCACACCCA 60.228 57.895 0.00 0.00 0.00 4.51
251 252 1.227853 ACAAGAAGACGCCACACCC 60.228 57.895 0.00 0.00 0.00 4.61
252 253 0.531974 TGACAAGAAGACGCCACACC 60.532 55.000 0.00 0.00 0.00 4.16
253 254 0.861837 CTGACAAGAAGACGCCACAC 59.138 55.000 0.00 0.00 0.00 3.82
254 255 0.249868 CCTGACAAGAAGACGCCACA 60.250 55.000 0.00 0.00 0.00 4.17
255 256 1.569479 GCCTGACAAGAAGACGCCAC 61.569 60.000 0.00 0.00 0.00 5.01
256 257 1.301716 GCCTGACAAGAAGACGCCA 60.302 57.895 0.00 0.00 0.00 5.69
257 258 2.383527 CGCCTGACAAGAAGACGCC 61.384 63.158 0.00 0.00 0.00 5.68
258 259 3.016474 GCGCCTGACAAGAAGACGC 62.016 63.158 0.00 0.00 37.93 5.19
259 260 2.383527 GGCGCCTGACAAGAAGACG 61.384 63.158 22.15 0.00 0.00 4.18
260 261 1.301716 TGGCGCCTGACAAGAAGAC 60.302 57.895 29.70 0.00 0.00 3.01
261 262 1.301716 GTGGCGCCTGACAAGAAGA 60.302 57.895 29.70 0.00 32.32 2.87
262 263 1.294659 GAGTGGCGCCTGACAAGAAG 61.295 60.000 29.70 0.00 32.32 2.85
263 264 1.301716 GAGTGGCGCCTGACAAGAA 60.302 57.895 29.70 0.07 32.32 2.52
264 265 2.038814 TTGAGTGGCGCCTGACAAGA 62.039 55.000 29.70 1.01 32.32 3.02
265 266 1.165907 TTTGAGTGGCGCCTGACAAG 61.166 55.000 29.70 0.00 32.32 3.16
266 267 0.749818 TTTTGAGTGGCGCCTGACAA 60.750 50.000 29.70 24.70 32.32 3.18
267 268 0.749818 TTTTTGAGTGGCGCCTGACA 60.750 50.000 29.70 20.51 0.00 3.58
268 269 0.040067 CTTTTTGAGTGGCGCCTGAC 60.040 55.000 29.70 18.92 0.00 3.51
269 270 0.179032 TCTTTTTGAGTGGCGCCTGA 60.179 50.000 29.70 4.80 0.00 3.86
270 271 0.883833 ATCTTTTTGAGTGGCGCCTG 59.116 50.000 29.70 6.34 0.00 4.85
271 272 1.168714 GATCTTTTTGAGTGGCGCCT 58.831 50.000 29.70 8.29 0.00 5.52
272 273 0.881118 TGATCTTTTTGAGTGGCGCC 59.119 50.000 22.73 22.73 0.00 6.53
273 274 1.537202 ACTGATCTTTTTGAGTGGCGC 59.463 47.619 0.00 0.00 0.00 6.53
274 275 2.160417 GGACTGATCTTTTTGAGTGGCG 59.840 50.000 0.00 0.00 0.00 5.69
275 276 3.149196 TGGACTGATCTTTTTGAGTGGC 58.851 45.455 0.00 0.00 0.00 5.01
276 277 4.392940 ACTGGACTGATCTTTTTGAGTGG 58.607 43.478 0.00 0.00 0.00 4.00
277 278 7.496529 TTTACTGGACTGATCTTTTTGAGTG 57.503 36.000 0.00 0.00 0.00 3.51
278 279 7.993183 TCTTTTACTGGACTGATCTTTTTGAGT 59.007 33.333 0.00 0.00 0.00 3.41
279 280 8.383318 TCTTTTACTGGACTGATCTTTTTGAG 57.617 34.615 0.00 0.00 0.00 3.02
280 281 8.746052 TTCTTTTACTGGACTGATCTTTTTGA 57.254 30.769 0.00 0.00 0.00 2.69
281 282 9.971922 ATTTCTTTTACTGGACTGATCTTTTTG 57.028 29.630 0.00 0.00 0.00 2.44
286 287 9.454859 CCTAAATTTCTTTTACTGGACTGATCT 57.545 33.333 0.00 0.00 0.00 2.75
287 288 9.449719 TCCTAAATTTCTTTTACTGGACTGATC 57.550 33.333 0.00 0.00 0.00 2.92
288 289 9.454859 CTCCTAAATTTCTTTTACTGGACTGAT 57.545 33.333 0.00 0.00 0.00 2.90
289 290 8.437575 ACTCCTAAATTTCTTTTACTGGACTGA 58.562 33.333 0.00 0.00 0.00 3.41
290 291 8.622948 ACTCCTAAATTTCTTTTACTGGACTG 57.377 34.615 0.00 0.00 0.00 3.51
291 292 9.945904 CTACTCCTAAATTTCTTTTACTGGACT 57.054 33.333 0.00 0.00 0.00 3.85
292 293 9.722184 ACTACTCCTAAATTTCTTTTACTGGAC 57.278 33.333 0.00 0.00 0.00 4.02
319 320 7.010830 TGCGAACAAAATCAATTCACAAAATGA 59.989 29.630 0.00 0.00 34.65 2.57
320 321 7.124471 TGCGAACAAAATCAATTCACAAAATG 58.876 30.769 0.00 0.00 0.00 2.32
321 322 7.244166 TGCGAACAAAATCAATTCACAAAAT 57.756 28.000 0.00 0.00 0.00 1.82
322 323 6.653273 TGCGAACAAAATCAATTCACAAAA 57.347 29.167 0.00 0.00 0.00 2.44
323 324 6.312426 ACTTGCGAACAAAATCAATTCACAAA 59.688 30.769 0.00 0.00 34.74 2.83
324 325 5.809562 ACTTGCGAACAAAATCAATTCACAA 59.190 32.000 0.00 0.00 34.74 3.33
325 326 5.347342 ACTTGCGAACAAAATCAATTCACA 58.653 33.333 0.00 0.00 34.74 3.58
326 327 5.458452 TGACTTGCGAACAAAATCAATTCAC 59.542 36.000 0.00 0.00 34.74 3.18
327 328 5.586339 TGACTTGCGAACAAAATCAATTCA 58.414 33.333 0.00 0.00 34.74 2.57
328 329 6.509317 TTGACTTGCGAACAAAATCAATTC 57.491 33.333 0.00 0.00 36.64 2.17
329 330 6.900568 TTTGACTTGCGAACAAAATCAATT 57.099 29.167 0.00 0.00 39.16 2.32
330 331 6.900568 TTTTGACTTGCGAACAAAATCAAT 57.099 29.167 12.02 0.00 39.16 2.57
331 332 6.900568 ATTTTGACTTGCGAACAAAATCAA 57.099 29.167 18.11 1.09 45.03 2.57
332 333 6.312426 ACAATTTTGACTTGCGAACAAAATCA 59.688 30.769 21.37 5.74 46.39 2.57
333 334 6.704819 ACAATTTTGACTTGCGAACAAAATC 58.295 32.000 21.37 0.00 46.39 2.17
335 336 5.635280 TGACAATTTTGACTTGCGAACAAAA 59.365 32.000 16.04 16.04 43.91 2.44
336 337 5.164233 TGACAATTTTGACTTGCGAACAAA 58.836 33.333 0.00 0.00 34.74 2.83
337 338 4.738124 TGACAATTTTGACTTGCGAACAA 58.262 34.783 0.00 0.00 0.00 2.83
338 339 4.362932 TGACAATTTTGACTTGCGAACA 57.637 36.364 0.00 0.00 0.00 3.18
339 340 5.288472 AGTTTGACAATTTTGACTTGCGAAC 59.712 36.000 0.00 0.00 31.44 3.95
340 341 5.406649 AGTTTGACAATTTTGACTTGCGAA 58.593 33.333 0.00 0.00 0.00 4.70
341 342 4.992688 AGTTTGACAATTTTGACTTGCGA 58.007 34.783 0.00 0.00 0.00 5.10
342 343 5.483213 CAAGTTTGACAATTTTGACTTGCG 58.517 37.500 13.83 0.00 38.01 4.85
344 345 5.500610 CGGCAAGTTTGACAATTTTGACTTG 60.501 40.000 18.90 18.90 44.01 3.16
345 346 4.566360 CGGCAAGTTTGACAATTTTGACTT 59.434 37.500 13.42 6.43 35.35 3.01
346 347 4.111916 CGGCAAGTTTGACAATTTTGACT 58.888 39.130 13.42 1.07 35.35 3.41
347 348 3.245048 CCGGCAAGTTTGACAATTTTGAC 59.755 43.478 13.42 10.57 35.35 3.18
348 349 3.131223 TCCGGCAAGTTTGACAATTTTGA 59.869 39.130 13.42 0.00 35.35 2.69
349 350 3.452474 TCCGGCAAGTTTGACAATTTTG 58.548 40.909 0.00 7.47 35.35 2.44
350 351 3.810310 TCCGGCAAGTTTGACAATTTT 57.190 38.095 0.00 0.00 35.35 1.82
351 352 3.320541 TGATCCGGCAAGTTTGACAATTT 59.679 39.130 0.00 0.00 35.35 1.82
352 353 2.890311 TGATCCGGCAAGTTTGACAATT 59.110 40.909 0.00 0.00 35.35 2.32
353 354 2.513753 TGATCCGGCAAGTTTGACAAT 58.486 42.857 0.00 0.00 35.35 2.71
354 355 1.974265 TGATCCGGCAAGTTTGACAA 58.026 45.000 0.00 0.00 35.35 3.18
355 356 1.974265 TTGATCCGGCAAGTTTGACA 58.026 45.000 0.00 0.00 35.35 3.58
356 357 2.487762 TCATTGATCCGGCAAGTTTGAC 59.512 45.455 0.00 0.00 0.00 3.18
357 358 2.749076 CTCATTGATCCGGCAAGTTTGA 59.251 45.455 0.00 0.00 0.00 2.69
358 359 2.733227 GCTCATTGATCCGGCAAGTTTG 60.733 50.000 0.00 0.00 0.00 2.93
359 360 1.474077 GCTCATTGATCCGGCAAGTTT 59.526 47.619 0.00 0.00 0.00 2.66
360 361 1.098050 GCTCATTGATCCGGCAAGTT 58.902 50.000 0.00 0.00 0.00 2.66
361 362 0.254178 AGCTCATTGATCCGGCAAGT 59.746 50.000 0.00 0.00 0.00 3.16
362 363 0.942962 GAGCTCATTGATCCGGCAAG 59.057 55.000 9.40 0.00 0.00 4.01
363 364 0.543277 AGAGCTCATTGATCCGGCAA 59.457 50.000 17.77 0.00 0.00 4.52
364 365 0.105593 GAGAGCTCATTGATCCGGCA 59.894 55.000 17.77 0.00 0.00 5.69
365 366 0.943359 CGAGAGCTCATTGATCCGGC 60.943 60.000 17.77 0.00 0.00 6.13
366 367 3.191903 CGAGAGCTCATTGATCCGG 57.808 57.895 17.77 0.00 0.00 5.14
673 681 1.002274 GGAGGAGGAGGAGGCTTCA 59.998 63.158 0.00 0.00 0.00 3.02
675 683 0.263468 GTAGGAGGAGGAGGAGGCTT 59.737 60.000 0.00 0.00 0.00 4.35
676 684 1.661004 GGTAGGAGGAGGAGGAGGCT 61.661 65.000 0.00 0.00 0.00 4.58
841 856 1.739338 GCGTCGAGGTGGATGGAGAT 61.739 60.000 7.01 0.00 0.00 2.75
936 954 2.722548 CGCACGTAGAGATCGCCG 60.723 66.667 0.00 0.00 0.00 6.46
939 957 0.924363 CGTTCCGCACGTAGAGATCG 60.924 60.000 0.00 0.00 44.49 3.69
1088 1106 2.351244 ATCTCTCGCGCAACCCTCA 61.351 57.895 8.75 0.00 0.00 3.86
1098 1116 3.486542 GCATTTCCTCAAACATCTCTCGC 60.487 47.826 0.00 0.00 0.00 5.03
1113 1131 1.134401 TCATCTCTCACCGGCATTTCC 60.134 52.381 0.00 0.00 0.00 3.13
1173 1191 4.512914 GCCACATCCAGCTCCCCC 62.513 72.222 0.00 0.00 0.00 5.40
1185 1203 1.175347 TAAACAATGCCAGCGCCACA 61.175 50.000 2.29 0.00 0.00 4.17
1191 1209 3.256631 CCATATCCCTAAACAATGCCAGC 59.743 47.826 0.00 0.00 0.00 4.85
1197 1215 6.590656 TTCTCCACCATATCCCTAAACAAT 57.409 37.500 0.00 0.00 0.00 2.71
1198 1216 6.364701 CATTCTCCACCATATCCCTAAACAA 58.635 40.000 0.00 0.00 0.00 2.83
1221 1239 1.207488 CCTCATTCACCCTGACCCCA 61.207 60.000 0.00 0.00 0.00 4.96
1348 1366 2.771321 CCACCATGGCAGCCCCTAT 61.771 63.158 13.04 0.00 0.00 2.57
1383 1401 2.429930 GCCACTGCTACACACCCA 59.570 61.111 0.00 0.00 33.53 4.51
1392 1410 2.011617 AAACTTCCCTGGCCACTGCT 62.012 55.000 0.00 0.00 37.74 4.24
1425 1443 3.011144 TCCATGCAAAAACATCCCTCCTA 59.989 43.478 0.00 0.00 0.00 2.94
1461 1479 2.110967 CCCATGAGCAGCAAGTCCG 61.111 63.158 0.00 0.00 0.00 4.79
1511 1529 0.602905 CAAACCCTCGGCGAGAAACT 60.603 55.000 36.47 16.04 0.00 2.66
1520 1538 0.949105 CGTTGGACTCAAACCCTCGG 60.949 60.000 0.00 0.00 34.28 4.63
1548 1566 2.336667 GCATTTAGCACGCCAACAAAT 58.663 42.857 0.00 0.00 44.79 2.32
1644 1662 2.288640 GCAGCCATAATGCTCCATTTCC 60.289 50.000 0.00 0.00 40.32 3.13
1659 1677 1.005097 AGAAGATCAACCATGCAGCCA 59.995 47.619 0.00 0.00 0.00 4.75
1683 1701 1.209504 TCTTGAATAAGACCAGCCCGG 59.790 52.381 0.00 0.00 37.99 5.73
1743 1761 4.410400 GTGCCCCAGAGAACCGGG 62.410 72.222 6.32 0.00 42.67 5.73
1773 1791 0.245539 CCAGGCCATGTTTCTTGCAG 59.754 55.000 5.01 0.00 0.00 4.41
1804 1822 5.242795 ACTAGCTTGTTACCAACCTTGAT 57.757 39.130 0.00 0.00 0.00 2.57
1825 1843 4.809070 AGCTGGCTCCAGTTCAAC 57.191 55.556 16.51 0.70 45.24 3.18
1875 1893 3.055240 CCCATTTCTTTGCCTTGGCATAA 60.055 43.478 15.58 11.09 0.00 1.90
1881 1899 4.020839 ACTTCATCCCATTTCTTTGCCTTG 60.021 41.667 0.00 0.00 0.00 3.61
1944 1962 1.599047 GCTCCAGCCAGCTGACTTA 59.401 57.895 21.01 0.00 46.30 2.24
2009 2027 2.860735 CGAACGGAATCCTTGTGATCTC 59.139 50.000 0.00 0.00 31.61 2.75
2010 2028 2.418746 CCGAACGGAATCCTTGTGATCT 60.419 50.000 7.53 0.00 37.50 2.75
2063 2081 0.921896 ATACCCTGCATCTGCCAACT 59.078 50.000 0.00 0.00 41.18 3.16
2082 2100 1.244816 CAGACGACACCTCTGGTACA 58.755 55.000 0.00 0.00 32.11 2.90
2091 2109 2.348666 GTCATGCAATACAGACGACACC 59.651 50.000 0.00 0.00 0.00 4.16
2097 2115 4.877823 TCTCCAATGTCATGCAATACAGAC 59.122 41.667 9.92 5.45 0.00 3.51
2130 2148 0.245539 GCACCTTGATTGCATGCACT 59.754 50.000 22.58 16.46 39.93 4.40
2151 2169 1.083806 CAATTGCCAGACGCTCGCTA 61.084 55.000 0.00 0.00 38.78 4.26
2334 2352 3.821033 ACCAATAGTCAAGGCAAGAACAC 59.179 43.478 0.00 0.00 0.00 3.32
2401 2423 7.639113 AAAAGAACATTACTGTTGACTCCAA 57.361 32.000 2.81 0.00 45.57 3.53
2427 2449 4.271661 ACTACTGTGTTTTCCCGGAAAAA 58.728 39.130 23.97 13.18 42.09 1.94
2429 2451 3.564053 ACTACTGTGTTTTCCCGGAAA 57.436 42.857 8.63 8.63 0.00 3.13
2430 2452 3.564053 AACTACTGTGTTTTCCCGGAA 57.436 42.857 0.73 0.00 0.00 4.30
2431 2453 3.564053 AAACTACTGTGTTTTCCCGGA 57.436 42.857 0.73 0.00 36.86 5.14
2432 2454 4.642445 AAAAACTACTGTGTTTTCCCGG 57.358 40.909 15.98 0.00 45.77 5.73
2450 2472 7.063662 GGCTTTTACGTTTTCCTGAAAGAAAAA 59.936 33.333 0.00 0.00 44.88 1.94
2451 2473 6.532302 GGCTTTTACGTTTTCCTGAAAGAAAA 59.468 34.615 0.00 0.00 42.07 2.29
2452 2474 6.037726 GGCTTTTACGTTTTCCTGAAAGAAA 58.962 36.000 0.00 0.00 34.07 2.52
2453 2475 5.358725 AGGCTTTTACGTTTTCCTGAAAGAA 59.641 36.000 0.00 0.00 34.07 2.52
2454 2476 4.885325 AGGCTTTTACGTTTTCCTGAAAGA 59.115 37.500 0.00 0.00 34.07 2.52
2455 2477 5.183014 AGGCTTTTACGTTTTCCTGAAAG 57.817 39.130 0.00 0.00 0.00 2.62
2456 2478 5.105675 ACAAGGCTTTTACGTTTTCCTGAAA 60.106 36.000 0.00 0.00 0.00 2.69
2457 2479 4.399934 ACAAGGCTTTTACGTTTTCCTGAA 59.600 37.500 0.00 0.00 0.00 3.02
2458 2480 3.949113 ACAAGGCTTTTACGTTTTCCTGA 59.051 39.130 0.00 0.00 0.00 3.86
2459 2481 4.041723 CACAAGGCTTTTACGTTTTCCTG 58.958 43.478 0.00 0.00 0.00 3.86
2460 2482 3.697542 ACACAAGGCTTTTACGTTTTCCT 59.302 39.130 0.00 0.00 0.00 3.36
2461 2483 4.036567 ACACAAGGCTTTTACGTTTTCC 57.963 40.909 0.00 0.00 0.00 3.13
2462 2484 5.275556 CGAAACACAAGGCTTTTACGTTTTC 60.276 40.000 0.00 5.36 0.00 2.29
2463 2485 4.559643 CGAAACACAAGGCTTTTACGTTTT 59.440 37.500 0.00 0.00 0.00 2.43
2464 2486 4.099824 CGAAACACAAGGCTTTTACGTTT 58.900 39.130 0.00 4.96 0.00 3.60
2465 2487 3.374678 TCGAAACACAAGGCTTTTACGTT 59.625 39.130 0.00 0.00 0.00 3.99
2466 2488 2.937799 TCGAAACACAAGGCTTTTACGT 59.062 40.909 0.00 0.00 0.00 3.57
2467 2489 3.595709 TCGAAACACAAGGCTTTTACG 57.404 42.857 0.00 0.00 0.00 3.18
2468 2490 3.668656 GCATCGAAACACAAGGCTTTTAC 59.331 43.478 0.00 0.00 0.00 2.01
2469 2491 3.316588 TGCATCGAAACACAAGGCTTTTA 59.683 39.130 0.00 0.00 0.00 1.52
2470 2492 2.100584 TGCATCGAAACACAAGGCTTTT 59.899 40.909 0.00 0.00 0.00 2.27
2471 2493 1.680735 TGCATCGAAACACAAGGCTTT 59.319 42.857 0.00 0.00 0.00 3.51
2472 2494 1.317613 TGCATCGAAACACAAGGCTT 58.682 45.000 0.00 0.00 0.00 4.35
2473 2495 1.538047 ATGCATCGAAACACAAGGCT 58.462 45.000 0.00 0.00 0.00 4.58
2474 2496 1.987770 CAATGCATCGAAACACAAGGC 59.012 47.619 0.00 0.00 0.00 4.35
2475 2497 3.557577 TCAATGCATCGAAACACAAGG 57.442 42.857 0.00 0.00 0.00 3.61
2476 2498 6.110543 TCTATCAATGCATCGAAACACAAG 57.889 37.500 0.00 0.00 0.00 3.16
2477 2499 6.371271 TCTTCTATCAATGCATCGAAACACAA 59.629 34.615 0.00 0.00 0.00 3.33
2478 2500 5.874261 TCTTCTATCAATGCATCGAAACACA 59.126 36.000 0.00 0.00 0.00 3.72
2479 2501 6.349973 TCTTCTATCAATGCATCGAAACAC 57.650 37.500 0.00 0.00 0.00 3.32
2480 2502 8.661352 TTATCTTCTATCAATGCATCGAAACA 57.339 30.769 0.00 0.00 0.00 2.83
2481 2503 8.982685 TCTTATCTTCTATCAATGCATCGAAAC 58.017 33.333 0.00 0.00 0.00 2.78
2482 2504 9.201127 CTCTTATCTTCTATCAATGCATCGAAA 57.799 33.333 0.00 0.00 0.00 3.46
2483 2505 8.363390 ACTCTTATCTTCTATCAATGCATCGAA 58.637 33.333 0.00 0.00 0.00 3.71
2484 2506 7.890515 ACTCTTATCTTCTATCAATGCATCGA 58.109 34.615 0.00 0.00 0.00 3.59
2485 2507 8.531622 AACTCTTATCTTCTATCAATGCATCG 57.468 34.615 0.00 0.00 0.00 3.84
2487 2509 9.624373 ACAAACTCTTATCTTCTATCAATGCAT 57.376 29.630 0.00 0.00 0.00 3.96
2497 2519 8.861086 TCTGACTTGTACAAACTCTTATCTTCT 58.139 33.333 10.03 0.00 0.00 2.85
2498 2520 9.134734 CTCTGACTTGTACAAACTCTTATCTTC 57.865 37.037 10.03 0.00 0.00 2.87
2499 2521 8.861086 TCTCTGACTTGTACAAACTCTTATCTT 58.139 33.333 10.03 0.00 0.00 2.40
2500 2522 8.410673 TCTCTGACTTGTACAAACTCTTATCT 57.589 34.615 10.03 0.00 0.00 1.98
2501 2523 7.757624 CCTCTCTGACTTGTACAAACTCTTATC 59.242 40.741 10.03 0.37 0.00 1.75
2502 2524 7.310113 CCCTCTCTGACTTGTACAAACTCTTAT 60.310 40.741 10.03 0.00 0.00 1.73
2503 2525 6.015350 CCCTCTCTGACTTGTACAAACTCTTA 60.015 42.308 10.03 0.18 0.00 2.10
2504 2526 5.221541 CCCTCTCTGACTTGTACAAACTCTT 60.222 44.000 10.03 0.00 0.00 2.85
2505 2527 4.282195 CCCTCTCTGACTTGTACAAACTCT 59.718 45.833 10.03 0.00 0.00 3.24
2506 2528 4.561105 CCCTCTCTGACTTGTACAAACTC 58.439 47.826 10.03 7.75 0.00 3.01
2507 2529 3.244249 GCCCTCTCTGACTTGTACAAACT 60.244 47.826 10.03 0.00 0.00 2.66
2508 2530 3.067833 GCCCTCTCTGACTTGTACAAAC 58.932 50.000 10.03 7.53 0.00 2.93
2509 2531 2.703536 TGCCCTCTCTGACTTGTACAAA 59.296 45.455 10.03 0.00 0.00 2.83
2510 2532 2.037251 GTGCCCTCTCTGACTTGTACAA 59.963 50.000 8.28 8.28 0.00 2.41
2511 2533 1.618837 GTGCCCTCTCTGACTTGTACA 59.381 52.381 0.00 0.00 0.00 2.90
2512 2534 1.618837 TGTGCCCTCTCTGACTTGTAC 59.381 52.381 0.00 0.00 0.00 2.90
2513 2535 1.895798 CTGTGCCCTCTCTGACTTGTA 59.104 52.381 0.00 0.00 0.00 2.41
2514 2536 0.683973 CTGTGCCCTCTCTGACTTGT 59.316 55.000 0.00 0.00 0.00 3.16
2515 2537 0.673022 GCTGTGCCCTCTCTGACTTG 60.673 60.000 0.00 0.00 0.00 3.16
2516 2538 0.835543 AGCTGTGCCCTCTCTGACTT 60.836 55.000 0.00 0.00 0.00 3.01
2517 2539 0.040351 TAGCTGTGCCCTCTCTGACT 59.960 55.000 0.00 0.00 0.00 3.41
2518 2540 0.459489 CTAGCTGTGCCCTCTCTGAC 59.541 60.000 0.00 0.00 0.00 3.51
2519 2541 0.332972 TCTAGCTGTGCCCTCTCTGA 59.667 55.000 0.00 0.00 0.00 3.27
2520 2542 0.746063 CTCTAGCTGTGCCCTCTCTG 59.254 60.000 0.00 0.00 0.00 3.35
2521 2543 0.334676 ACTCTAGCTGTGCCCTCTCT 59.665 55.000 0.00 0.00 0.00 3.10
2522 2544 0.459489 CACTCTAGCTGTGCCCTCTC 59.541 60.000 0.00 0.00 0.00 3.20
2523 2545 0.040351 TCACTCTAGCTGTGCCCTCT 59.960 55.000 0.00 0.00 35.58 3.69
2524 2546 0.174617 GTCACTCTAGCTGTGCCCTC 59.825 60.000 0.00 0.49 35.58 4.30
2525 2547 0.542938 TGTCACTCTAGCTGTGCCCT 60.543 55.000 0.00 0.00 35.58 5.19
2526 2548 0.321671 TTGTCACTCTAGCTGTGCCC 59.678 55.000 0.00 5.20 35.58 5.36
2527 2549 1.433534 GTTGTCACTCTAGCTGTGCC 58.566 55.000 0.00 1.55 35.58 5.01
2528 2550 1.063806 CGTTGTCACTCTAGCTGTGC 58.936 55.000 0.00 6.88 35.58 4.57
2529 2551 2.054363 CACGTTGTCACTCTAGCTGTG 58.946 52.381 0.00 8.74 36.82 3.66
2530 2552 1.954382 TCACGTTGTCACTCTAGCTGT 59.046 47.619 0.00 0.00 0.00 4.40
2531 2553 2.706555 TCACGTTGTCACTCTAGCTG 57.293 50.000 0.00 0.00 0.00 4.24
2532 2554 2.094494 CCATCACGTTGTCACTCTAGCT 60.094 50.000 0.00 0.00 0.00 3.32
2533 2555 2.263077 CCATCACGTTGTCACTCTAGC 58.737 52.381 0.00 0.00 0.00 3.42
2534 2556 2.263077 GCCATCACGTTGTCACTCTAG 58.737 52.381 0.00 0.00 0.00 2.43
2535 2557 1.067142 GGCCATCACGTTGTCACTCTA 60.067 52.381 0.00 0.00 0.00 2.43
2536 2558 0.320771 GGCCATCACGTTGTCACTCT 60.321 55.000 0.00 0.00 0.00 3.24
2537 2559 1.298859 GGGCCATCACGTTGTCACTC 61.299 60.000 4.39 0.00 0.00 3.51
2538 2560 1.302511 GGGCCATCACGTTGTCACT 60.303 57.895 4.39 0.00 0.00 3.41
2539 2561 1.169661 TTGGGCCATCACGTTGTCAC 61.170 55.000 7.26 0.00 0.00 3.67
2540 2562 0.888736 CTTGGGCCATCACGTTGTCA 60.889 55.000 7.26 0.00 0.00 3.58
2541 2563 1.875963 CTTGGGCCATCACGTTGTC 59.124 57.895 7.26 0.00 0.00 3.18
2542 2564 2.268076 GCTTGGGCCATCACGTTGT 61.268 57.895 7.26 0.00 0.00 3.32
2543 2565 2.568090 GCTTGGGCCATCACGTTG 59.432 61.111 7.26 0.00 0.00 4.10
2553 2575 1.377333 GGTGTCTAGTGGCTTGGGC 60.377 63.158 0.00 0.00 37.82 5.36
2554 2576 0.321653 GTGGTGTCTAGTGGCTTGGG 60.322 60.000 0.00 0.00 0.00 4.12
2555 2577 0.321653 GGTGGTGTCTAGTGGCTTGG 60.322 60.000 0.00 0.00 0.00 3.61
2556 2578 0.687354 AGGTGGTGTCTAGTGGCTTG 59.313 55.000 0.00 0.00 0.00 4.01
2557 2579 0.687354 CAGGTGGTGTCTAGTGGCTT 59.313 55.000 0.00 0.00 0.00 4.35
2558 2580 1.831652 GCAGGTGGTGTCTAGTGGCT 61.832 60.000 0.00 0.00 0.00 4.75
2559 2581 1.376037 GCAGGTGGTGTCTAGTGGC 60.376 63.158 0.00 0.00 0.00 5.01
2560 2582 0.320771 GTGCAGGTGGTGTCTAGTGG 60.321 60.000 0.00 0.00 0.00 4.00
2561 2583 0.392706 TGTGCAGGTGGTGTCTAGTG 59.607 55.000 0.00 0.00 0.00 2.74
2562 2584 0.681733 CTGTGCAGGTGGTGTCTAGT 59.318 55.000 0.00 0.00 0.00 2.57
2563 2585 0.671781 GCTGTGCAGGTGGTGTCTAG 60.672 60.000 1.11 0.00 0.00 2.43
2564 2586 1.371183 GCTGTGCAGGTGGTGTCTA 59.629 57.895 1.11 0.00 0.00 2.59
2565 2587 2.111878 GCTGTGCAGGTGGTGTCT 59.888 61.111 1.11 0.00 0.00 3.41
2566 2588 2.980233 GGCTGTGCAGGTGGTGTC 60.980 66.667 1.11 0.00 0.00 3.67
2567 2589 4.935495 CGGCTGTGCAGGTGGTGT 62.935 66.667 1.11 0.00 0.00 4.16
2575 2597 2.832661 AGGTTTTGCGGCTGTGCA 60.833 55.556 0.00 0.00 44.61 4.57
2576 2598 2.050077 GAGGTTTTGCGGCTGTGC 60.050 61.111 0.00 0.00 0.00 4.57
2577 2599 0.318107 CAAGAGGTTTTGCGGCTGTG 60.318 55.000 0.00 0.00 0.00 3.66
2578 2600 2.032981 CAAGAGGTTTTGCGGCTGT 58.967 52.632 0.00 0.00 0.00 4.40
2579 2601 1.372128 GCAAGAGGTTTTGCGGCTG 60.372 57.895 0.00 0.00 43.36 4.85
2580 2602 3.042560 GCAAGAGGTTTTGCGGCT 58.957 55.556 0.00 0.00 43.36 5.52
2585 2607 2.255252 CGGGCGCAAGAGGTTTTG 59.745 61.111 10.83 0.00 43.02 2.44
2586 2608 3.670377 GCGGGCGCAAGAGGTTTT 61.670 61.111 10.83 0.00 41.49 2.43
2603 2625 4.704833 CCAGGCAGTGGGTGACGG 62.705 72.222 0.00 0.00 43.63 4.79
2611 2633 2.738213 AAGTCGGAAGCCAGGCAGTG 62.738 60.000 15.80 0.00 0.00 3.66
2612 2634 2.520536 AAGTCGGAAGCCAGGCAGT 61.521 57.895 15.80 0.00 0.00 4.40
2613 2635 2.037136 CAAGTCGGAAGCCAGGCAG 61.037 63.158 15.80 1.77 0.00 4.85
2614 2636 1.841302 ATCAAGTCGGAAGCCAGGCA 61.841 55.000 15.80 0.00 0.00 4.75
2615 2637 1.078143 ATCAAGTCGGAAGCCAGGC 60.078 57.895 1.84 1.84 0.00 4.85
2616 2638 0.250234 TCATCAAGTCGGAAGCCAGG 59.750 55.000 0.00 0.00 0.00 4.45
2617 2639 2.322355 ATCATCAAGTCGGAAGCCAG 57.678 50.000 0.00 0.00 0.00 4.85
2618 2640 2.358957 CAATCATCAAGTCGGAAGCCA 58.641 47.619 0.00 0.00 0.00 4.75
2619 2641 1.064654 GCAATCATCAAGTCGGAAGCC 59.935 52.381 0.00 0.00 0.00 4.35
2620 2642 1.267732 CGCAATCATCAAGTCGGAAGC 60.268 52.381 0.00 0.00 0.00 3.86
2621 2643 2.002586 ACGCAATCATCAAGTCGGAAG 58.997 47.619 0.00 0.00 0.00 3.46
2622 2644 2.093306 ACGCAATCATCAAGTCGGAA 57.907 45.000 0.00 0.00 0.00 4.30
2623 2645 1.731709 CAACGCAATCATCAAGTCGGA 59.268 47.619 0.00 0.00 0.00 4.55
2624 2646 1.791555 GCAACGCAATCATCAAGTCGG 60.792 52.381 0.00 0.00 0.00 4.79
2625 2647 1.136000 TGCAACGCAATCATCAAGTCG 60.136 47.619 0.00 0.00 34.76 4.18
2626 2648 2.095567 ACTGCAACGCAATCATCAAGTC 60.096 45.455 0.00 0.00 38.41 3.01
2627 2649 1.881973 ACTGCAACGCAATCATCAAGT 59.118 42.857 0.00 0.00 38.41 3.16
2628 2650 2.247637 CACTGCAACGCAATCATCAAG 58.752 47.619 0.00 0.00 38.41 3.02
2629 2651 1.666599 GCACTGCAACGCAATCATCAA 60.667 47.619 2.23 0.00 38.41 2.57
2630 2652 0.109643 GCACTGCAACGCAATCATCA 60.110 50.000 2.23 0.00 38.41 3.07
2631 2653 0.169672 AGCACTGCAACGCAATCATC 59.830 50.000 9.48 0.00 38.41 2.92
2632 2654 0.599558 AAGCACTGCAACGCAATCAT 59.400 45.000 9.48 0.00 38.41 2.45
2633 2655 0.040157 GAAGCACTGCAACGCAATCA 60.040 50.000 9.48 0.00 38.41 2.57
2634 2656 0.730494 GGAAGCACTGCAACGCAATC 60.730 55.000 9.48 6.94 38.41 2.67
2635 2657 1.286880 GGAAGCACTGCAACGCAAT 59.713 52.632 9.48 0.00 38.41 3.56
2636 2658 2.062361 CTGGAAGCACTGCAACGCAA 62.062 55.000 9.48 0.00 38.41 4.85
2637 2659 2.515757 TGGAAGCACTGCAACGCA 60.516 55.556 9.48 0.00 36.92 5.24
2638 2660 1.785041 TTCTGGAAGCACTGCAACGC 61.785 55.000 3.30 0.00 0.00 4.84
2639 2661 0.877071 ATTCTGGAAGCACTGCAACG 59.123 50.000 3.30 0.00 0.00 4.10
2640 2662 1.881973 TGATTCTGGAAGCACTGCAAC 59.118 47.619 3.30 0.00 31.05 4.17
2641 2663 2.275134 TGATTCTGGAAGCACTGCAA 57.725 45.000 3.30 0.00 31.05 4.08
2647 2669 1.466856 GCATGGTGATTCTGGAAGCA 58.533 50.000 0.00 0.00 33.94 3.91
2648 2670 0.743097 GGCATGGTGATTCTGGAAGC 59.257 55.000 0.00 0.00 0.00 3.86
2649 2671 1.747355 GTGGCATGGTGATTCTGGAAG 59.253 52.381 0.00 0.00 0.00 3.46
2650 2672 1.616725 GGTGGCATGGTGATTCTGGAA 60.617 52.381 0.00 0.00 0.00 3.53
2651 2673 0.034186 GGTGGCATGGTGATTCTGGA 60.034 55.000 0.00 0.00 0.00 3.86
2652 2674 0.323633 TGGTGGCATGGTGATTCTGG 60.324 55.000 0.00 0.00 0.00 3.86
2653 2675 1.203052 GTTGGTGGCATGGTGATTCTG 59.797 52.381 0.00 0.00 0.00 3.02
2654 2676 1.203038 TGTTGGTGGCATGGTGATTCT 60.203 47.619 0.00 0.00 0.00 2.40
2655 2677 1.255882 TGTTGGTGGCATGGTGATTC 58.744 50.000 0.00 0.00 0.00 2.52
2656 2678 1.551430 CATGTTGGTGGCATGGTGATT 59.449 47.619 0.00 0.00 39.82 2.57
2657 2679 1.187974 CATGTTGGTGGCATGGTGAT 58.812 50.000 0.00 0.00 39.82 3.06
2658 2680 0.112025 TCATGTTGGTGGCATGGTGA 59.888 50.000 0.00 0.00 42.72 4.02
2659 2681 1.134936 CATCATGTTGGTGGCATGGTG 60.135 52.381 4.47 4.47 45.29 4.17
2660 2682 1.187974 CATCATGTTGGTGGCATGGT 58.812 50.000 0.00 0.00 42.72 3.55
2661 2683 0.462375 CCATCATGTTGGTGGCATGG 59.538 55.000 13.81 3.33 42.45 3.66
2667 2689 0.533491 CCTTGGCCATCATGTTGGTG 59.467 55.000 21.24 10.85 39.11 4.17
2668 2690 0.409092 TCCTTGGCCATCATGTTGGT 59.591 50.000 21.24 0.00 39.11 3.67
2669 2691 0.819582 GTCCTTGGCCATCATGTTGG 59.180 55.000 17.14 17.14 39.94 3.77
2670 2692 0.452987 CGTCCTTGGCCATCATGTTG 59.547 55.000 6.09 0.00 0.00 3.33
2671 2693 0.038166 ACGTCCTTGGCCATCATGTT 59.962 50.000 6.09 0.00 0.00 2.71
2672 2694 0.677731 CACGTCCTTGGCCATCATGT 60.678 55.000 6.09 1.73 0.00 3.21
2673 2695 1.996786 GCACGTCCTTGGCCATCATG 61.997 60.000 6.09 1.00 0.00 3.07
2674 2696 1.750399 GCACGTCCTTGGCCATCAT 60.750 57.895 6.09 0.00 0.00 2.45
2675 2697 2.359850 GCACGTCCTTGGCCATCA 60.360 61.111 6.09 0.00 0.00 3.07
2676 2698 3.134127 GGCACGTCCTTGGCCATC 61.134 66.667 6.09 0.00 46.92 3.51
2680 2702 3.056328 GAAGGGCACGTCCTTGGC 61.056 66.667 12.93 0.87 46.31 4.52
2681 2703 2.359975 GGAAGGGCACGTCCTTGG 60.360 66.667 14.35 0.00 46.31 3.61
2682 2704 2.742372 CGGAAGGGCACGTCCTTG 60.742 66.667 19.18 0.02 46.31 3.61
2684 2706 3.382832 CTCGGAAGGGCACGTCCT 61.383 66.667 19.18 0.00 42.32 3.85
2692 2714 1.878522 CGAACATCGCTCGGAAGGG 60.879 63.158 0.00 0.00 36.81 3.95
2693 2715 3.693245 CGAACATCGCTCGGAAGG 58.307 61.111 0.00 0.00 31.14 3.46
2698 2720 0.527600 TTGATCCCGAACATCGCTCG 60.528 55.000 0.00 0.00 38.82 5.03
2699 2721 1.212616 CTTGATCCCGAACATCGCTC 58.787 55.000 0.00 0.00 38.82 5.03
2700 2722 0.537188 ACTTGATCCCGAACATCGCT 59.463 50.000 0.00 0.00 38.82 4.93
2701 2723 0.652592 CACTTGATCCCGAACATCGC 59.347 55.000 0.00 0.00 38.82 4.58
2702 2724 1.290203 CCACTTGATCCCGAACATCG 58.710 55.000 0.00 0.00 40.07 3.84
2703 2725 1.017387 GCCACTTGATCCCGAACATC 58.983 55.000 0.00 0.00 0.00 3.06
2704 2726 0.327924 TGCCACTTGATCCCGAACAT 59.672 50.000 0.00 0.00 0.00 2.71
2705 2727 0.327924 ATGCCACTTGATCCCGAACA 59.672 50.000 0.00 0.00 0.00 3.18
2706 2728 0.734889 CATGCCACTTGATCCCGAAC 59.265 55.000 0.00 0.00 0.00 3.95
2707 2729 0.327924 ACATGCCACTTGATCCCGAA 59.672 50.000 0.00 0.00 0.00 4.30
2708 2730 0.107703 GACATGCCACTTGATCCCGA 60.108 55.000 0.00 0.00 0.00 5.14
2709 2731 1.097547 GGACATGCCACTTGATCCCG 61.098 60.000 0.00 0.00 36.34 5.14
2710 2732 0.034186 TGGACATGCCACTTGATCCC 60.034 55.000 4.93 0.00 43.33 3.85
2711 2733 3.575506 TGGACATGCCACTTGATCC 57.424 52.632 4.93 0.00 43.33 3.36
2721 2743 1.252904 ACTGGTGGCATTGGACATGC 61.253 55.000 0.00 0.00 43.85 4.06
2722 2744 0.813184 GACTGGTGGCATTGGACATG 59.187 55.000 0.00 0.00 32.08 3.21
2723 2745 0.323725 GGACTGGTGGCATTGGACAT 60.324 55.000 0.00 0.00 32.08 3.06
2724 2746 1.074775 GGACTGGTGGCATTGGACA 59.925 57.895 0.00 0.00 0.00 4.02
2725 2747 1.074775 TGGACTGGTGGCATTGGAC 59.925 57.895 0.00 0.00 0.00 4.02
2726 2748 1.074775 GTGGACTGGTGGCATTGGA 59.925 57.895 0.00 0.00 0.00 3.53
2727 2749 0.827089 TTGTGGACTGGTGGCATTGG 60.827 55.000 0.00 0.00 0.00 3.16
2728 2750 1.000060 CTTTGTGGACTGGTGGCATTG 60.000 52.381 0.00 0.00 0.00 2.82
2729 2751 1.331214 CTTTGTGGACTGGTGGCATT 58.669 50.000 0.00 0.00 0.00 3.56
2730 2752 0.185901 ACTTTGTGGACTGGTGGCAT 59.814 50.000 0.00 0.00 0.00 4.40
2731 2753 0.465460 GACTTTGTGGACTGGTGGCA 60.465 55.000 0.00 0.00 0.00 4.92
2732 2754 1.507141 CGACTTTGTGGACTGGTGGC 61.507 60.000 0.00 0.00 0.00 5.01
2733 2755 0.179056 ACGACTTTGTGGACTGGTGG 60.179 55.000 0.00 0.00 0.00 4.61
2734 2756 1.217882 GACGACTTTGTGGACTGGTG 58.782 55.000 0.00 0.00 0.00 4.17
2735 2757 0.106149 GGACGACTTTGTGGACTGGT 59.894 55.000 0.00 0.00 0.00 4.00
2736 2758 0.393077 AGGACGACTTTGTGGACTGG 59.607 55.000 0.00 0.00 0.00 4.00
2737 2759 2.135933 GAAGGACGACTTTGTGGACTG 58.864 52.381 0.00 0.00 40.21 3.51
2738 2760 1.070289 GGAAGGACGACTTTGTGGACT 59.930 52.381 0.00 0.00 40.21 3.85
2739 2761 1.509703 GGAAGGACGACTTTGTGGAC 58.490 55.000 0.00 0.00 40.21 4.02
2740 2762 0.032952 CGGAAGGACGACTTTGTGGA 59.967 55.000 0.00 0.00 40.21 4.02
2741 2763 0.032952 TCGGAAGGACGACTTTGTGG 59.967 55.000 0.00 0.00 40.21 4.17
2742 2764 1.419374 CTCGGAAGGACGACTTTGTG 58.581 55.000 0.00 0.00 40.21 3.33
2743 2765 0.319641 GCTCGGAAGGACGACTTTGT 60.320 55.000 0.00 0.00 40.21 2.83
2744 2766 0.038159 AGCTCGGAAGGACGACTTTG 60.038 55.000 0.00 0.00 40.21 2.77
2745 2767 0.038159 CAGCTCGGAAGGACGACTTT 60.038 55.000 0.00 0.00 40.21 2.66
2746 2768 0.894184 TCAGCTCGGAAGGACGACTT 60.894 55.000 0.00 0.00 43.65 3.01
2747 2769 1.303398 TCAGCTCGGAAGGACGACT 60.303 57.895 0.00 0.00 38.06 4.18
2748 2770 1.153997 GTCAGCTCGGAAGGACGAC 60.154 63.158 0.00 0.00 38.06 4.34
2749 2771 1.587043 CTGTCAGCTCGGAAGGACGA 61.587 60.000 0.00 0.00 41.13 4.20
2750 2772 1.153939 CTGTCAGCTCGGAAGGACG 60.154 63.158 0.00 0.00 33.04 4.79
2751 2773 1.174783 TACTGTCAGCTCGGAAGGAC 58.825 55.000 0.00 0.00 0.00 3.85
2752 2774 1.919240 TTACTGTCAGCTCGGAAGGA 58.081 50.000 0.00 0.00 0.00 3.36
2753 2775 2.093973 ACATTACTGTCAGCTCGGAAGG 60.094 50.000 0.00 0.00 0.00 3.46
2754 2776 3.238108 ACATTACTGTCAGCTCGGAAG 57.762 47.619 0.00 0.00 0.00 3.46
2755 2777 3.258372 AGAACATTACTGTCAGCTCGGAA 59.742 43.478 0.00 0.00 33.36 4.30
2756 2778 2.826128 AGAACATTACTGTCAGCTCGGA 59.174 45.455 0.00 0.00 33.36 4.55
2757 2779 3.238108 AGAACATTACTGTCAGCTCGG 57.762 47.619 0.00 0.00 33.36 4.63
2758 2780 4.987832 ACTAGAACATTACTGTCAGCTCG 58.012 43.478 0.00 0.00 33.36 5.03
2759 2781 6.401581 GCAAACTAGAACATTACTGTCAGCTC 60.402 42.308 0.00 0.00 33.36 4.09
2760 2782 5.409826 GCAAACTAGAACATTACTGTCAGCT 59.590 40.000 0.00 0.00 33.36 4.24
2761 2783 5.179368 TGCAAACTAGAACATTACTGTCAGC 59.821 40.000 0.00 0.00 33.36 4.26
2762 2784 6.619446 GCTGCAAACTAGAACATTACTGTCAG 60.619 42.308 0.00 0.00 33.36 3.51
2763 2785 5.179368 GCTGCAAACTAGAACATTACTGTCA 59.821 40.000 0.00 0.00 33.36 3.58
2764 2786 5.179368 TGCTGCAAACTAGAACATTACTGTC 59.821 40.000 0.00 0.00 33.36 3.51
2765 2787 5.063204 TGCTGCAAACTAGAACATTACTGT 58.937 37.500 0.00 0.00 37.12 3.55
2766 2788 5.611796 TGCTGCAAACTAGAACATTACTG 57.388 39.130 0.00 0.00 0.00 2.74
2767 2789 6.633500 TTTGCTGCAAACTAGAACATTACT 57.367 33.333 22.84 0.00 0.00 2.24
2768 2790 6.528072 GGATTTGCTGCAAACTAGAACATTAC 59.472 38.462 28.11 7.89 36.13 1.89
2769 2791 6.350110 GGGATTTGCTGCAAACTAGAACATTA 60.350 38.462 28.11 3.73 36.13 1.90
2789 2811 3.633525 CCGATGTCACATGAATTGGGATT 59.366 43.478 0.00 0.00 40.70 3.01
2802 2824 2.990941 CATTGCTAATGCCGATGTCAC 58.009 47.619 0.00 0.00 38.71 3.67
2840 4063 5.353394 AACATATCTCTTACCCGCTGAAA 57.647 39.130 0.00 0.00 0.00 2.69
2874 4097 6.872020 TCAGGATAAACTTAAGTGTAGTGTGC 59.128 38.462 9.34 0.00 0.00 4.57
2884 4107 8.956426 TGGTTTTGCTATCAGGATAAACTTAAG 58.044 33.333 0.00 0.00 0.00 1.85
2904 4127 9.753674 TGAATACTTCTTCAGGATTATGGTTTT 57.246 29.630 0.00 0.00 35.98 2.43
2905 4128 9.178758 GTGAATACTTCTTCAGGATTATGGTTT 57.821 33.333 0.00 0.00 35.98 3.27
2916 4140 7.895975 TGAGTGAATGTGAATACTTCTTCAG 57.104 36.000 0.00 0.00 35.88 3.02
2933 4157 6.179906 AGAGAAGGACAGAAAATGAGTGAA 57.820 37.500 0.00 0.00 0.00 3.18
2934 4158 5.305386 TGAGAGAAGGACAGAAAATGAGTGA 59.695 40.000 0.00 0.00 0.00 3.41
2935 4159 5.545588 TGAGAGAAGGACAGAAAATGAGTG 58.454 41.667 0.00 0.00 0.00 3.51
2936 4160 5.279910 CCTGAGAGAAGGACAGAAAATGAGT 60.280 44.000 0.00 0.00 40.02 3.41
2937 4161 5.177326 CCTGAGAGAAGGACAGAAAATGAG 58.823 45.833 0.00 0.00 40.02 2.90
2938 4162 4.564406 GCCTGAGAGAAGGACAGAAAATGA 60.564 45.833 0.00 0.00 40.02 2.57
2939 4163 3.688673 GCCTGAGAGAAGGACAGAAAATG 59.311 47.826 0.00 0.00 40.02 2.32
2945 4176 1.515020 CCGCCTGAGAGAAGGACAG 59.485 63.158 0.00 0.00 40.02 3.51
2950 4181 1.153469 GGAAGCCGCCTGAGAGAAG 60.153 63.158 0.00 0.00 0.00 2.85
2980 4211 6.753913 AAGGTATCATCATGCGGGATATAT 57.246 37.500 0.00 0.00 0.00 0.86
2981 4212 7.669089 TTAAGGTATCATCATGCGGGATATA 57.331 36.000 0.00 0.00 0.00 0.86
3006 4237 4.467795 AGGTACTTGCTGCTTAAGAGATCA 59.532 41.667 6.67 0.00 27.25 2.92
3036 4267 3.230134 TGCAGCCTTTTGTGATACCTTT 58.770 40.909 0.00 0.00 0.00 3.11
3069 4300 2.282290 GCATTTGTTATTGGCATCGCAC 59.718 45.455 0.00 0.00 0.00 5.34
3070 4301 2.094338 TGCATTTGTTATTGGCATCGCA 60.094 40.909 0.00 0.00 0.00 5.10
3071 4302 2.538437 TGCATTTGTTATTGGCATCGC 58.462 42.857 0.00 0.00 0.00 4.58
3072 4303 5.494618 CAAATGCATTTGTTATTGGCATCG 58.505 37.500 34.17 12.14 43.80 3.84
3073 4304 5.065474 AGCAAATGCATTTGTTATTGGCATC 59.935 36.000 38.75 24.30 46.63 3.91
3074 4305 4.944930 AGCAAATGCATTTGTTATTGGCAT 59.055 33.333 38.75 18.32 46.63 4.40
3075 4306 4.325119 AGCAAATGCATTTGTTATTGGCA 58.675 34.783 38.75 0.00 46.63 4.92
3076 4307 4.950434 AGCAAATGCATTTGTTATTGGC 57.050 36.364 38.75 27.91 46.63 4.52
3077 4308 6.483385 TCAAGCAAATGCATTTGTTATTGG 57.517 33.333 38.75 26.79 46.63 3.16
3078 4309 7.970384 AGATCAAGCAAATGCATTTGTTATTG 58.030 30.769 38.75 35.48 46.63 1.90
3079 4310 8.038944 AGAGATCAAGCAAATGCATTTGTTATT 58.961 29.630 38.75 30.13 46.63 1.40
3082 4313 5.790593 AGAGATCAAGCAAATGCATTTGTT 58.209 33.333 38.75 34.28 46.63 2.83
3094 4336 5.617252 TGCATGATATGAAGAGATCAAGCA 58.383 37.500 9.88 9.88 46.66 3.91
3095 4337 6.183360 GGATGCATGATATGAAGAGATCAAGC 60.183 42.308 2.46 5.40 42.28 4.01
3109 4351 3.265995 AGCTGATGGATGGATGCATGATA 59.734 43.478 2.46 0.00 39.04 2.15
3116 4358 1.687563 TGCAAGCTGATGGATGGATG 58.312 50.000 0.00 0.00 0.00 3.51
3117 4359 2.447408 TTGCAAGCTGATGGATGGAT 57.553 45.000 0.00 0.00 0.00 3.41
3118 4360 2.028876 CATTGCAAGCTGATGGATGGA 58.971 47.619 4.94 0.00 0.00 3.41
3119 4361 1.538204 GCATTGCAAGCTGATGGATGG 60.538 52.381 4.94 0.00 0.00 3.51
3152 4394 9.623350 CCTTAACTCTACACAGTTAGAACTTAC 57.377 37.037 0.00 0.00 39.49 2.34
3153 4395 8.800332 CCCTTAACTCTACACAGTTAGAACTTA 58.200 37.037 0.00 0.00 39.49 2.24
3154 4396 7.508296 TCCCTTAACTCTACACAGTTAGAACTT 59.492 37.037 0.00 0.00 39.49 2.66
3155 4397 7.008941 TCCCTTAACTCTACACAGTTAGAACT 58.991 38.462 0.00 0.00 39.49 3.01
3156 4398 7.224522 TCCCTTAACTCTACACAGTTAGAAC 57.775 40.000 0.00 0.00 39.49 3.01
3157 4399 8.431910 AATCCCTTAACTCTACACAGTTAGAA 57.568 34.615 0.00 0.00 39.49 2.10
3158 4400 8.431910 AAATCCCTTAACTCTACACAGTTAGA 57.568 34.615 0.00 0.00 39.49 2.10
3159 4401 9.583765 GTAAATCCCTTAACTCTACACAGTTAG 57.416 37.037 0.00 0.00 39.49 2.34
3189 4431 5.548406 ACATGTCTAGTTGTACCAAGTTCC 58.452 41.667 0.00 0.00 0.00 3.62
3197 4439 7.847878 TCCATGATGGAACATGTCTAGTTGTAC 60.848 40.741 12.63 0.00 45.00 2.90
3233 4475 8.638629 AGTCAGAAACTGAACACTAGTAGTAT 57.361 34.615 1.57 0.00 42.46 2.12
3267 4509 1.267806 CAATCCTGCAGACACACCAAC 59.732 52.381 17.39 0.00 0.00 3.77
3301 4543 2.729156 GCCTAACATCACGAGCAAAAGC 60.729 50.000 0.00 0.00 0.00 3.51
3307 4549 1.656652 ACATGCCTAACATCACGAGC 58.343 50.000 0.00 0.00 36.64 5.03
3310 4552 5.086058 GTGTAAAACATGCCTAACATCACG 58.914 41.667 0.00 0.00 36.64 4.35
3322 4564 4.672862 TCAATTTCGCGTGTGTAAAACATG 59.327 37.500 5.77 1.88 46.86 3.21
3335 4577 1.468520 ACCCACTCAATCAATTTCGCG 59.531 47.619 0.00 0.00 0.00 5.87



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.