Multiple sequence alignment - TraesCS2B01G524400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G524400 chr2B 100.000 8654 0 0 991 9644 718960478 718969131 0.000000e+00 15982.0
1 TraesCS2B01G524400 chr2B 87.210 1165 94 22 3265 4405 755625248 755626381 0.000000e+00 1275.0
2 TraesCS2B01G524400 chr2B 100.000 584 0 0 1 584 718959488 718960071 0.000000e+00 1079.0
3 TraesCS2B01G524400 chr2B 86.617 665 58 17 4881 5528 603175213 603175863 0.000000e+00 706.0
4 TraesCS2B01G524400 chr2B 81.274 518 47 21 5531 6006 603175912 603176421 3.290000e-99 374.0
5 TraesCS2B01G524400 chr2B 88.430 121 14 0 4702 4822 603175094 603175214 7.800000e-31 147.0
6 TraesCS2B01G524400 chr2B 97.500 40 1 0 7722 7761 718967125 718967164 1.740000e-07 69.4
7 TraesCS2B01G524400 chr2B 97.500 40 1 0 7638 7677 718967209 718967248 1.740000e-07 69.4
8 TraesCS2B01G524400 chr2D 97.294 3252 59 15 4407 7643 592784819 592788056 0.000000e+00 5491.0
9 TraesCS2B01G524400 chr2D 96.393 2301 48 10 991 3267 592782527 592784816 0.000000e+00 3757.0
10 TraesCS2B01G524400 chr2D 95.075 1340 44 10 7680 9003 592788057 592789390 0.000000e+00 2089.0
11 TraesCS2B01G524400 chr2D 96.396 777 22 3 3637 4412 32177998 32177227 0.000000e+00 1275.0
12 TraesCS2B01G524400 chr2D 97.895 380 8 0 3265 3644 32178696 32178317 0.000000e+00 658.0
13 TraesCS2B01G524400 chr2D 87.900 562 40 12 4881 5426 512830474 512831023 3.800000e-178 636.0
14 TraesCS2B01G524400 chr2D 85.657 495 44 4 5531 6009 512831144 512831627 6.730000e-136 496.0
15 TraesCS2B01G524400 chr2D 88.654 379 20 11 219 584 592782067 592782435 3.200000e-119 440.0
16 TraesCS2B01G524400 chr2D 96.875 160 5 0 9485 9644 592790474 592790633 1.600000e-67 268.0
17 TraesCS2B01G524400 chr2D 85.778 225 26 5 9214 9434 592789800 592790022 5.820000e-57 233.0
18 TraesCS2B01G524400 chr2D 93.548 93 5 1 9096 9188 592789388 592789479 4.700000e-28 137.0
19 TraesCS2B01G524400 chr2D 86.777 121 16 0 4702 4822 512830355 512830475 1.690000e-27 135.0
20 TraesCS2B01G524400 chr2A 96.328 1634 45 9 6022 7643 727240571 727242201 0.000000e+00 2671.0
21 TraesCS2B01G524400 chr2A 93.796 1628 71 9 4396 6012 727238908 727240516 0.000000e+00 2420.0
22 TraesCS2B01G524400 chr2A 94.218 1349 43 13 7680 9003 727242202 727243540 0.000000e+00 2026.0
23 TraesCS2B01G524400 chr2A 89.007 1692 97 29 1452 3100 727237005 727238650 0.000000e+00 2012.0
24 TraesCS2B01G524400 chr2A 93.750 368 19 3 219 584 727235606 727235971 5.090000e-152 549.0
25 TraesCS2B01G524400 chr2A 89.406 387 25 9 1011 1384 727236486 727236869 3.150000e-129 473.0
26 TraesCS2B01G524400 chr2A 99.375 160 1 0 9485 9644 727244352 727244511 3.410000e-74 291.0
27 TraesCS2B01G524400 chr2A 93.919 148 9 0 3120 3267 727238770 727238917 3.500000e-54 224.0
28 TraesCS2B01G524400 chr2A 85.202 223 25 5 9214 9434 727243788 727244004 1.260000e-53 222.0
29 TraesCS2B01G524400 chr2A 91.367 139 11 1 6024 6161 776401109 776400971 1.280000e-43 189.0
30 TraesCS2B01G524400 chr2A 89.928 139 13 1 6024 6161 776426933 776426795 2.770000e-40 178.0
31 TraesCS2B01G524400 chr2A 90.164 122 8 4 9082 9200 727243521 727243641 1.300000e-33 156.0
32 TraesCS2B01G524400 chr6D 87.160 1176 102 18 3266 4412 90875202 90876357 0.000000e+00 1290.0
33 TraesCS2B01G524400 chr6D 89.664 774 76 4 3632 4404 152189552 152188782 0.000000e+00 983.0
34 TraesCS2B01G524400 chr6D 85.950 363 23 6 3262 3621 152189941 152189604 7.120000e-96 363.0
35 TraesCS2B01G524400 chr6D 95.283 106 5 0 8994 9099 52011289 52011184 1.670000e-37 169.0
36 TraesCS2B01G524400 chr6D 84.211 190 11 3 3446 3632 452312016 452312189 5.990000e-37 167.0
37 TraesCS2B01G524400 chr5A 87.147 1167 94 22 3262 4404 534362949 534361815 0.000000e+00 1273.0
38 TraesCS2B01G524400 chr5A 87.199 1164 94 21 3267 4406 606051587 606052719 0.000000e+00 1273.0
39 TraesCS2B01G524400 chr5A 86.686 1029 68 29 5531 6525 121718403 121717410 0.000000e+00 1077.0
40 TraesCS2B01G524400 chr5A 93.032 531 27 6 6034 6556 80508319 80507791 0.000000e+00 767.0
41 TraesCS2B01G524400 chr5A 86.354 491 47 14 5531 6009 80508858 80508376 1.440000e-142 518.0
42 TraesCS2B01G524400 chr5A 85.650 223 20 6 5318 5528 121718673 121718451 3.500000e-54 224.0
43 TraesCS2B01G524400 chr5A 85.268 224 19 8 5318 5528 80509128 80508906 1.630000e-52 219.0
44 TraesCS2B01G524400 chr5B 95.915 612 17 3 3794 4405 324963790 324964393 0.000000e+00 985.0
45 TraesCS2B01G524400 chr5B 93.186 543 24 6 6030 6566 117254328 117254863 0.000000e+00 785.0
46 TraesCS2B01G524400 chr5B 91.822 538 29 8 6030 6566 128677176 128677699 0.000000e+00 736.0
47 TraesCS2B01G524400 chr5B 95.511 401 16 2 3309 3708 324963376 324963775 2.940000e-179 640.0
48 TraesCS2B01G524400 chr5B 87.247 494 38 12 5531 6010 93471980 93471498 3.060000e-149 540.0
49 TraesCS2B01G524400 chr5B 83.768 499 44 22 5529 6009 128676644 128677123 1.150000e-118 438.0
50 TraesCS2B01G524400 chr5B 87.440 207 17 2 5331 5528 117253542 117253748 7.530000e-56 230.0
51 TraesCS2B01G524400 chr5B 93.600 125 8 0 5404 5528 128676471 128676595 4.600000e-43 187.0
52 TraesCS2B01G524400 chr5B 93.694 111 6 1 8998 9108 701174761 701174652 2.150000e-36 165.0
53 TraesCS2B01G524400 chr3D 87.044 849 67 13 4705 5528 552664031 552663201 0.000000e+00 918.0
54 TraesCS2B01G524400 chr3D 83.845 749 75 29 5529 6245 552663158 552662424 0.000000e+00 671.0
55 TraesCS2B01G524400 chr3D 75.307 652 82 43 1780 2400 421761304 421761907 1.250000e-58 239.0
56 TraesCS2B01G524400 chr3D 85.612 139 16 2 1186 1324 421760819 421760953 1.010000e-29 143.0
57 TraesCS2B01G524400 chr4B 86.105 842 73 15 4701 5528 81927326 81926515 0.000000e+00 867.0
58 TraesCS2B01G524400 chr4B 89.150 553 40 9 6030 6566 81925918 81925370 0.000000e+00 671.0
59 TraesCS2B01G524400 chr4B 85.714 497 49 6 5529 6009 81926470 81925980 1.120000e-138 505.0
60 TraesCS2B01G524400 chr4B 92.623 122 6 3 9002 9122 29586772 29586891 1.290000e-38 172.0
61 TraesCS2B01G524400 chr1B 86.174 839 72 14 4705 5528 169947134 169946325 0.000000e+00 867.0
62 TraesCS2B01G524400 chr1B 91.009 545 29 7 6030 6566 169945724 169945192 0.000000e+00 717.0
63 TraesCS2B01G524400 chr6A 88.923 659 61 5 3751 4408 612997759 612997112 0.000000e+00 802.0
64 TraesCS2B01G524400 chr6A 88.619 659 62 6 3751 4408 613042974 613042328 0.000000e+00 789.0
65 TraesCS2B01G524400 chr6A 86.234 385 25 15 5926 6282 125156143 125156527 9.080000e-105 392.0
66 TraesCS2B01G524400 chr6A 90.551 127 7 4 9000 9123 228534635 228534759 7.750000e-36 163.0
67 TraesCS2B01G524400 chr5D 92.379 538 26 8 6030 6566 118202461 118201938 0.000000e+00 752.0
68 TraesCS2B01G524400 chr5D 92.381 525 31 5 6034 6551 87538422 87537900 0.000000e+00 739.0
69 TraesCS2B01G524400 chr5D 87.627 493 36 11 5531 6009 87538960 87538479 5.090000e-152 549.0
70 TraesCS2B01G524400 chr5D 87.448 478 40 12 5531 5997 122058528 122058060 5.130000e-147 532.0
71 TraesCS2B01G524400 chr5D 85.371 499 34 23 5529 6009 118202991 118202514 1.880000e-131 481.0
72 TraesCS2B01G524400 chr5D 84.615 377 39 5 3255 3628 82952620 82952260 3.310000e-94 357.0
73 TraesCS2B01G524400 chr5D 87.500 296 32 3 3635 3926 82952224 82951930 4.310000e-88 337.0
74 TraesCS2B01G524400 chr5D 86.161 224 17 8 5318 5528 87539230 87539008 7.530000e-56 230.0
75 TraesCS2B01G524400 chr7A 87.661 543 37 14 6030 6566 54587081 54586563 1.070000e-168 604.0
76 TraesCS2B01G524400 chr6B 85.864 382 25 14 5929 6282 153230587 153230207 7.070000e-101 379.0
77 TraesCS2B01G524400 chr6B 89.024 246 15 2 6321 6566 153230205 153229972 2.630000e-75 294.0
78 TraesCS2B01G524400 chr7D 83.554 377 38 7 3259 3632 195287061 195287416 2.010000e-86 331.0
79 TraesCS2B01G524400 chr3B 73.966 653 96 45 1780 2400 549441970 549442580 7.640000e-46 196.0
80 TraesCS2B01G524400 chr3B 96.154 104 4 0 8995 9098 5951434 5951331 4.630000e-38 171.0
81 TraesCS2B01G524400 chr7B 97.059 102 3 0 9002 9103 40404463 40404564 1.290000e-38 172.0
82 TraesCS2B01G524400 chr7B 96.970 99 3 0 9000 9098 181033588 181033686 5.990000e-37 167.0
83 TraesCS2B01G524400 chr4A 94.595 111 5 1 9002 9112 665601140 665601249 4.630000e-38 171.0
84 TraesCS2B01G524400 chr4A 92.920 113 7 1 8996 9108 703218665 703218554 7.750000e-36 163.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G524400 chr2B 718959488 718969131 9643 False 4299.950000 15982 98.750000 1 9644 4 chr2B.!!$F3 9643
1 TraesCS2B01G524400 chr2B 755625248 755626381 1133 False 1275.000000 1275 87.210000 3265 4405 1 chr2B.!!$F1 1140
2 TraesCS2B01G524400 chr2B 603175094 603176421 1327 False 409.000000 706 85.440333 4702 6006 3 chr2B.!!$F2 1304
3 TraesCS2B01G524400 chr2D 592782067 592790633 8566 False 1773.571429 5491 93.373857 219 9644 7 chr2D.!!$F2 9425
4 TraesCS2B01G524400 chr2D 32177227 32178696 1469 True 966.500000 1275 97.145500 3265 4412 2 chr2D.!!$R1 1147
5 TraesCS2B01G524400 chr2D 512830355 512831627 1272 False 422.333333 636 86.778000 4702 6009 3 chr2D.!!$F1 1307
6 TraesCS2B01G524400 chr2A 727235606 727244511 8905 False 1104.400000 2671 92.516500 219 9644 10 chr2A.!!$F1 9425
7 TraesCS2B01G524400 chr6D 90875202 90876357 1155 False 1290.000000 1290 87.160000 3266 4412 1 chr6D.!!$F1 1146
8 TraesCS2B01G524400 chr6D 152188782 152189941 1159 True 673.000000 983 87.807000 3262 4404 2 chr6D.!!$R2 1142
9 TraesCS2B01G524400 chr5A 534361815 534362949 1134 True 1273.000000 1273 87.147000 3262 4404 1 chr5A.!!$R1 1142
10 TraesCS2B01G524400 chr5A 606051587 606052719 1132 False 1273.000000 1273 87.199000 3267 4406 1 chr5A.!!$F1 1139
11 TraesCS2B01G524400 chr5A 121717410 121718673 1263 True 650.500000 1077 86.168000 5318 6525 2 chr5A.!!$R3 1207
12 TraesCS2B01G524400 chr5A 80507791 80509128 1337 True 501.333333 767 88.218000 5318 6556 3 chr5A.!!$R2 1238
13 TraesCS2B01G524400 chr5B 324963376 324964393 1017 False 812.500000 985 95.713000 3309 4405 2 chr5B.!!$F3 1096
14 TraesCS2B01G524400 chr5B 117253542 117254863 1321 False 507.500000 785 90.313000 5331 6566 2 chr5B.!!$F1 1235
15 TraesCS2B01G524400 chr5B 128676471 128677699 1228 False 453.666667 736 89.730000 5404 6566 3 chr5B.!!$F2 1162
16 TraesCS2B01G524400 chr3D 552662424 552664031 1607 True 794.500000 918 85.444500 4705 6245 2 chr3D.!!$R1 1540
17 TraesCS2B01G524400 chr4B 81925370 81927326 1956 True 681.000000 867 86.989667 4701 6566 3 chr4B.!!$R1 1865
18 TraesCS2B01G524400 chr1B 169945192 169947134 1942 True 792.000000 867 88.591500 4705 6566 2 chr1B.!!$R1 1861
19 TraesCS2B01G524400 chr6A 612997112 612997759 647 True 802.000000 802 88.923000 3751 4408 1 chr6A.!!$R1 657
20 TraesCS2B01G524400 chr6A 613042328 613042974 646 True 789.000000 789 88.619000 3751 4408 1 chr6A.!!$R2 657
21 TraesCS2B01G524400 chr5D 118201938 118202991 1053 True 616.500000 752 88.875000 5529 6566 2 chr5D.!!$R4 1037
22 TraesCS2B01G524400 chr5D 87537900 87539230 1330 True 506.000000 739 88.723000 5318 6551 3 chr5D.!!$R3 1233
23 TraesCS2B01G524400 chr5D 82951930 82952620 690 True 347.000000 357 86.057500 3255 3926 2 chr5D.!!$R2 671
24 TraesCS2B01G524400 chr7A 54586563 54587081 518 True 604.000000 604 87.661000 6030 6566 1 chr7A.!!$R1 536
25 TraesCS2B01G524400 chr6B 153229972 153230587 615 True 336.500000 379 87.444000 5929 6566 2 chr6B.!!$R1 637

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
114 115 0.039346 CACCAATTGCACATCACGCA 60.039 50.000 0.00 0.00 37.68 5.24 F
212 213 0.250467 TTCTTGCTCACCCTCAGCAC 60.250 55.000 0.00 0.00 46.65 4.40 F
218 219 0.250513 CTCACCCTCAGCACTTACCC 59.749 60.000 0.00 0.00 0.00 3.69 F
223 224 0.404040 CCTCAGCACTTACCCCCAAA 59.596 55.000 0.00 0.00 0.00 3.28 F
1350 1479 0.794473 GCGGGTGCGTTATATAAGCC 59.206 55.000 11.79 3.38 0.00 4.35 F
2554 2779 2.104792 TGTCAGGTCAACAGAGGGAAAG 59.895 50.000 0.00 0.00 0.00 2.62 F
4732 5496 2.807967 GCAGTGTCTGAACATAGCACAA 59.192 45.455 0.66 0.00 37.81 3.33 F
4934 5698 0.172352 GGAGCACTCTCTGGTTCGAG 59.828 60.000 0.00 0.00 39.31 4.04 F
5773 6688 1.909700 TTCCGGAGCAGCATCTTTTT 58.090 45.000 3.34 0.00 0.00 1.94 F
6917 7957 3.571401 ACTCACAGGCATTTTGAAAGGAG 59.429 43.478 0.00 0.00 0.00 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1479 1676 1.986698 ATCACAAAATTGCTGCGAGC 58.013 45.000 0.00 1.70 42.82 5.03 R
1588 1785 4.938832 CAGGTAAAAACACGTCCATATGGA 59.061 41.667 20.98 20.98 43.08 3.41 R
2009 2232 5.290885 CAGGCAAAAGAAAAACAGTGTAACC 59.709 40.000 0.00 0.00 37.80 2.85 R
2554 2779 6.806739 GGACATGTTACCTTGCAAATAGTTTC 59.193 38.462 0.00 0.00 0.00 2.78 R
2784 3009 3.175109 GGGTACACCTAATTCTGACGG 57.825 52.381 0.00 0.00 35.85 4.79 R
4836 5600 3.873361 CCACTGTATCAATGACGCAAGAT 59.127 43.478 0.00 0.00 43.62 2.40 R
6326 7355 1.134098 AGCCCATTACCATCAGAACGG 60.134 52.381 0.00 0.00 0.00 4.44 R
7058 8098 1.453928 GCATACCTGCCAGAACCCC 60.454 63.158 0.00 0.00 42.88 4.95 R
7460 8510 4.702131 GTGAGGGAGACATGCTGTTTTTAT 59.298 41.667 0.00 0.00 0.00 1.40 R
9212 10296 0.888736 CATTCGAGGCCACCACAACA 60.889 55.000 5.01 0.00 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.956043 CCAAATGTGGTGGTGGTCG 59.044 57.895 0.00 0.00 40.42 4.79
30 31 1.285641 CAAATGTGGTGGTGGTCGC 59.714 57.895 0.00 0.00 0.00 5.19
31 32 1.901464 AAATGTGGTGGTGGTCGCC 60.901 57.895 0.00 0.00 46.03 5.54
43 44 4.166011 GTCGCCGCCATGCTTGAC 62.166 66.667 0.22 0.00 0.00 3.18
44 45 4.695993 TCGCCGCCATGCTTGACA 62.696 61.111 0.22 0.00 0.00 3.58
45 46 3.736100 CGCCGCCATGCTTGACAA 61.736 61.111 0.22 0.00 0.00 3.18
46 47 2.887360 GCCGCCATGCTTGACAAT 59.113 55.556 0.22 0.00 0.00 2.71
47 48 1.226773 GCCGCCATGCTTGACAATC 60.227 57.895 0.22 0.00 0.00 2.67
48 49 1.936436 GCCGCCATGCTTGACAATCA 61.936 55.000 0.22 0.00 0.00 2.57
49 50 0.099968 CCGCCATGCTTGACAATCAG 59.900 55.000 0.22 0.00 0.00 2.90
50 51 0.524816 CGCCATGCTTGACAATCAGC 60.525 55.000 0.22 0.00 0.00 4.26
51 52 0.528924 GCCATGCTTGACAATCAGCA 59.471 50.000 2.89 2.89 35.91 4.41
52 53 1.067425 GCCATGCTTGACAATCAGCAA 60.067 47.619 4.49 0.00 35.40 3.91
53 54 2.610976 GCCATGCTTGACAATCAGCAAA 60.611 45.455 4.49 0.00 35.40 3.68
54 55 2.991190 CCATGCTTGACAATCAGCAAAC 59.009 45.455 4.49 0.00 35.40 2.93
55 56 3.305813 CCATGCTTGACAATCAGCAAACT 60.306 43.478 4.49 0.00 35.40 2.66
56 57 4.082625 CCATGCTTGACAATCAGCAAACTA 60.083 41.667 4.49 0.00 35.40 2.24
57 58 4.488126 TGCTTGACAATCAGCAAACTAC 57.512 40.909 0.00 0.00 31.24 2.73
58 59 4.136796 TGCTTGACAATCAGCAAACTACT 58.863 39.130 0.00 0.00 31.24 2.57
59 60 4.580167 TGCTTGACAATCAGCAAACTACTT 59.420 37.500 0.00 0.00 31.24 2.24
60 61 5.149977 GCTTGACAATCAGCAAACTACTTC 58.850 41.667 0.00 0.00 0.00 3.01
61 62 5.689383 TTGACAATCAGCAAACTACTTCC 57.311 39.130 0.00 0.00 0.00 3.46
62 63 4.973168 TGACAATCAGCAAACTACTTCCT 58.027 39.130 0.00 0.00 0.00 3.36
63 64 4.997395 TGACAATCAGCAAACTACTTCCTC 59.003 41.667 0.00 0.00 0.00 3.71
64 65 4.327680 ACAATCAGCAAACTACTTCCTCC 58.672 43.478 0.00 0.00 0.00 4.30
65 66 4.042187 ACAATCAGCAAACTACTTCCTCCT 59.958 41.667 0.00 0.00 0.00 3.69
66 67 3.963428 TCAGCAAACTACTTCCTCCTC 57.037 47.619 0.00 0.00 0.00 3.71
67 68 2.567615 TCAGCAAACTACTTCCTCCTCC 59.432 50.000 0.00 0.00 0.00 4.30
68 69 2.303022 CAGCAAACTACTTCCTCCTCCA 59.697 50.000 0.00 0.00 0.00 3.86
69 70 3.054802 CAGCAAACTACTTCCTCCTCCAT 60.055 47.826 0.00 0.00 0.00 3.41
70 71 3.589288 AGCAAACTACTTCCTCCTCCATT 59.411 43.478 0.00 0.00 0.00 3.16
71 72 3.942115 GCAAACTACTTCCTCCTCCATTC 59.058 47.826 0.00 0.00 0.00 2.67
72 73 4.184629 CAAACTACTTCCTCCTCCATTCG 58.815 47.826 0.00 0.00 0.00 3.34
73 74 3.103080 ACTACTTCCTCCTCCATTCGT 57.897 47.619 0.00 0.00 0.00 3.85
74 75 3.025262 ACTACTTCCTCCTCCATTCGTC 58.975 50.000 0.00 0.00 0.00 4.20
75 76 1.196012 ACTTCCTCCTCCATTCGTCC 58.804 55.000 0.00 0.00 0.00 4.79
76 77 1.273324 ACTTCCTCCTCCATTCGTCCT 60.273 52.381 0.00 0.00 0.00 3.85
77 78 1.834263 CTTCCTCCTCCATTCGTCCTT 59.166 52.381 0.00 0.00 0.00 3.36
78 79 1.952621 TCCTCCTCCATTCGTCCTTT 58.047 50.000 0.00 0.00 0.00 3.11
79 80 1.831736 TCCTCCTCCATTCGTCCTTTC 59.168 52.381 0.00 0.00 0.00 2.62
80 81 1.134371 CCTCCTCCATTCGTCCTTTCC 60.134 57.143 0.00 0.00 0.00 3.13
81 82 0.909623 TCCTCCATTCGTCCTTTCCC 59.090 55.000 0.00 0.00 0.00 3.97
82 83 0.912486 CCTCCATTCGTCCTTTCCCT 59.088 55.000 0.00 0.00 0.00 4.20
83 84 1.134371 CCTCCATTCGTCCTTTCCCTC 60.134 57.143 0.00 0.00 0.00 4.30
84 85 0.909623 TCCATTCGTCCTTTCCCTCC 59.090 55.000 0.00 0.00 0.00 4.30
85 86 0.912486 CCATTCGTCCTTTCCCTCCT 59.088 55.000 0.00 0.00 0.00 3.69
86 87 1.282157 CCATTCGTCCTTTCCCTCCTT 59.718 52.381 0.00 0.00 0.00 3.36
87 88 2.633488 CATTCGTCCTTTCCCTCCTTC 58.367 52.381 0.00 0.00 0.00 3.46
88 89 0.981943 TTCGTCCTTTCCCTCCTTCC 59.018 55.000 0.00 0.00 0.00 3.46
89 90 0.116541 TCGTCCTTTCCCTCCTTCCT 59.883 55.000 0.00 0.00 0.00 3.36
90 91 0.537653 CGTCCTTTCCCTCCTTCCTC 59.462 60.000 0.00 0.00 0.00 3.71
91 92 1.897647 CGTCCTTTCCCTCCTTCCTCT 60.898 57.143 0.00 0.00 0.00 3.69
92 93 1.834896 GTCCTTTCCCTCCTTCCTCTC 59.165 57.143 0.00 0.00 0.00 3.20
93 94 1.437149 TCCTTTCCCTCCTTCCTCTCA 59.563 52.381 0.00 0.00 0.00 3.27
94 95 1.557371 CCTTTCCCTCCTTCCTCTCAC 59.443 57.143 0.00 0.00 0.00 3.51
95 96 1.557371 CTTTCCCTCCTTCCTCTCACC 59.443 57.143 0.00 0.00 0.00 4.02
96 97 0.491823 TTCCCTCCTTCCTCTCACCA 59.508 55.000 0.00 0.00 0.00 4.17
97 98 0.252284 TCCCTCCTTCCTCTCACCAC 60.252 60.000 0.00 0.00 0.00 4.16
98 99 1.268283 CCCTCCTTCCTCTCACCACC 61.268 65.000 0.00 0.00 0.00 4.61
99 100 0.545309 CCTCCTTCCTCTCACCACCA 60.545 60.000 0.00 0.00 0.00 4.17
100 101 1.352083 CTCCTTCCTCTCACCACCAA 58.648 55.000 0.00 0.00 0.00 3.67
101 102 1.912043 CTCCTTCCTCTCACCACCAAT 59.088 52.381 0.00 0.00 0.00 3.16
102 103 2.307098 CTCCTTCCTCTCACCACCAATT 59.693 50.000 0.00 0.00 0.00 2.32
103 104 2.040278 TCCTTCCTCTCACCACCAATTG 59.960 50.000 0.00 0.00 0.00 2.32
104 105 1.815003 CTTCCTCTCACCACCAATTGC 59.185 52.381 0.00 0.00 0.00 3.56
105 106 0.770499 TCCTCTCACCACCAATTGCA 59.230 50.000 0.00 0.00 0.00 4.08
106 107 0.883833 CCTCTCACCACCAATTGCAC 59.116 55.000 0.00 0.00 0.00 4.57
107 108 1.608055 CTCTCACCACCAATTGCACA 58.392 50.000 0.00 0.00 0.00 4.57
108 109 2.165167 CTCTCACCACCAATTGCACAT 58.835 47.619 0.00 0.00 0.00 3.21
109 110 2.161855 TCTCACCACCAATTGCACATC 58.838 47.619 0.00 0.00 0.00 3.06
110 111 1.887854 CTCACCACCAATTGCACATCA 59.112 47.619 0.00 0.00 0.00 3.07
111 112 1.612950 TCACCACCAATTGCACATCAC 59.387 47.619 0.00 0.00 0.00 3.06
112 113 0.597568 ACCACCAATTGCACATCACG 59.402 50.000 0.00 0.00 0.00 4.35
113 114 0.733566 CCACCAATTGCACATCACGC 60.734 55.000 0.00 0.00 0.00 5.34
114 115 0.039346 CACCAATTGCACATCACGCA 60.039 50.000 0.00 0.00 37.68 5.24
148 149 8.697846 ATTCAGCAAATTATTGTCACTTCATG 57.302 30.769 0.00 0.00 38.85 3.07
149 150 7.451501 TCAGCAAATTATTGTCACTTCATGA 57.548 32.000 0.00 0.00 38.85 3.07
150 151 7.884257 TCAGCAAATTATTGTCACTTCATGAA 58.116 30.769 8.12 8.12 39.72 2.57
151 152 8.024865 TCAGCAAATTATTGTCACTTCATGAAG 58.975 33.333 29.74 29.74 39.72 3.02
152 153 8.024865 CAGCAAATTATTGTCACTTCATGAAGA 58.975 33.333 36.15 17.73 39.72 2.87
153 154 8.025445 AGCAAATTATTGTCACTTCATGAAGAC 58.975 33.333 36.15 25.90 39.72 3.01
154 155 7.809331 GCAAATTATTGTCACTTCATGAAGACA 59.191 33.333 36.15 27.85 39.72 3.41
155 156 9.850628 CAAATTATTGTCACTTCATGAAGACAT 57.149 29.630 36.15 21.96 39.72 3.06
187 188 8.810652 TTACAAAGTTTTGGTCATATTTCAGC 57.189 30.769 9.22 0.00 42.34 4.26
188 189 5.920273 ACAAAGTTTTGGTCATATTTCAGCG 59.080 36.000 9.22 0.00 42.34 5.18
189 190 5.957842 AAGTTTTGGTCATATTTCAGCGA 57.042 34.783 0.00 0.00 0.00 4.93
190 191 5.957842 AGTTTTGGTCATATTTCAGCGAA 57.042 34.783 0.00 0.00 0.00 4.70
191 192 6.325919 AGTTTTGGTCATATTTCAGCGAAA 57.674 33.333 6.26 6.26 35.94 3.46
192 193 6.924111 AGTTTTGGTCATATTTCAGCGAAAT 58.076 32.000 16.71 16.71 43.49 2.17
193 194 7.378181 AGTTTTGGTCATATTTCAGCGAAATT 58.622 30.769 17.40 7.10 41.64 1.82
194 195 7.872483 AGTTTTGGTCATATTTCAGCGAAATTT 59.128 29.630 17.40 10.03 41.64 1.82
195 196 7.810766 TTTGGTCATATTTCAGCGAAATTTC 57.189 32.000 17.40 8.20 41.64 2.17
196 197 6.757897 TGGTCATATTTCAGCGAAATTTCT 57.242 33.333 15.92 0.00 41.64 2.52
197 198 7.156876 TGGTCATATTTCAGCGAAATTTCTT 57.843 32.000 15.92 1.75 41.64 2.52
198 199 7.028962 TGGTCATATTTCAGCGAAATTTCTTG 58.971 34.615 15.92 13.32 41.64 3.02
199 200 6.020360 GGTCATATTTCAGCGAAATTTCTTGC 60.020 38.462 15.92 12.40 41.64 4.01
200 201 6.749118 GTCATATTTCAGCGAAATTTCTTGCT 59.251 34.615 15.92 14.35 41.64 3.91
201 202 6.968904 TCATATTTCAGCGAAATTTCTTGCTC 59.031 34.615 15.92 0.94 41.64 4.26
202 203 4.566545 TTTCAGCGAAATTTCTTGCTCA 57.433 36.364 15.92 2.25 34.99 4.26
203 204 3.542712 TCAGCGAAATTTCTTGCTCAC 57.457 42.857 15.92 0.00 34.99 3.51
204 205 2.226437 TCAGCGAAATTTCTTGCTCACC 59.774 45.455 15.92 0.00 34.99 4.02
205 206 1.541588 AGCGAAATTTCTTGCTCACCC 59.458 47.619 15.92 0.00 30.37 4.61
206 207 1.541588 GCGAAATTTCTTGCTCACCCT 59.458 47.619 15.92 0.00 0.00 4.34
207 208 2.414691 GCGAAATTTCTTGCTCACCCTC 60.415 50.000 15.92 0.00 0.00 4.30
208 209 2.813754 CGAAATTTCTTGCTCACCCTCA 59.186 45.455 15.92 0.00 0.00 3.86
209 210 3.120060 CGAAATTTCTTGCTCACCCTCAG 60.120 47.826 15.92 0.00 0.00 3.35
210 211 1.831580 ATTTCTTGCTCACCCTCAGC 58.168 50.000 0.00 0.00 37.40 4.26
211 212 0.473755 TTTCTTGCTCACCCTCAGCA 59.526 50.000 0.00 0.00 45.32 4.41
212 213 0.250467 TTCTTGCTCACCCTCAGCAC 60.250 55.000 0.00 0.00 46.65 4.40
213 214 1.123861 TCTTGCTCACCCTCAGCACT 61.124 55.000 0.00 0.00 46.65 4.40
214 215 0.250640 CTTGCTCACCCTCAGCACTT 60.251 55.000 0.00 0.00 46.65 3.16
215 216 1.002430 CTTGCTCACCCTCAGCACTTA 59.998 52.381 0.00 0.00 46.65 2.24
216 217 0.321671 TGCTCACCCTCAGCACTTAC 59.678 55.000 0.00 0.00 42.09 2.34
217 218 0.391793 GCTCACCCTCAGCACTTACC 60.392 60.000 0.00 0.00 36.82 2.85
218 219 0.250513 CTCACCCTCAGCACTTACCC 59.749 60.000 0.00 0.00 0.00 3.69
219 220 1.198759 TCACCCTCAGCACTTACCCC 61.199 60.000 0.00 0.00 0.00 4.95
220 221 1.923909 ACCCTCAGCACTTACCCCC 60.924 63.158 0.00 0.00 0.00 5.40
221 222 1.923395 CCCTCAGCACTTACCCCCA 60.923 63.158 0.00 0.00 0.00 4.96
222 223 1.497309 CCCTCAGCACTTACCCCCAA 61.497 60.000 0.00 0.00 0.00 4.12
223 224 0.404040 CCTCAGCACTTACCCCCAAA 59.596 55.000 0.00 0.00 0.00 3.28
224 225 1.005924 CCTCAGCACTTACCCCCAAAT 59.994 52.381 0.00 0.00 0.00 2.32
225 226 2.369394 CTCAGCACTTACCCCCAAATC 58.631 52.381 0.00 0.00 0.00 2.17
226 227 1.005450 TCAGCACTTACCCCCAAATCC 59.995 52.381 0.00 0.00 0.00 3.01
227 228 1.005924 CAGCACTTACCCCCAAATCCT 59.994 52.381 0.00 0.00 0.00 3.24
232 233 2.581246 ACTTACCCCCAAATCCTCTTCC 59.419 50.000 0.00 0.00 0.00 3.46
233 234 2.369668 TACCCCCAAATCCTCTTCCA 57.630 50.000 0.00 0.00 0.00 3.53
235 236 1.288932 ACCCCCAAATCCTCTTCCATG 59.711 52.381 0.00 0.00 0.00 3.66
240 241 4.386761 CCCCAAATCCTCTTCCATGTACAT 60.387 45.833 1.41 1.41 0.00 2.29
265 266 2.712944 CGATTTGCCATGGCCTGCA 61.713 57.895 33.44 12.76 41.09 4.41
266 267 1.143183 GATTTGCCATGGCCTGCAG 59.857 57.895 33.44 6.78 38.95 4.41
267 268 2.918230 GATTTGCCATGGCCTGCAGC 62.918 60.000 33.44 13.68 38.95 5.25
407 419 3.564345 AACCCAGGCTCAGCAGCTG 62.564 63.158 17.10 17.10 46.03 4.24
1147 1264 1.137086 CGATTTCCGTCTCTGGGACAT 59.863 52.381 8.63 0.00 44.70 3.06
1212 1329 4.438744 GCTGATTTTGTGTTAGGATTCGGG 60.439 45.833 0.00 0.00 0.00 5.14
1338 1466 1.713830 GATGTTAGAACGCGGGTGC 59.286 57.895 12.47 3.48 37.91 5.01
1350 1479 0.794473 GCGGGTGCGTTATATAAGCC 59.206 55.000 11.79 3.38 0.00 4.35
1479 1676 2.152699 CGCTCTGTACAACTCGGCG 61.153 63.158 0.00 0.00 35.54 6.46
1494 1691 2.438954 GGCGCTCGCAGCAATTTTG 61.439 57.895 16.36 0.00 42.58 2.44
1853 2058 4.637534 GTGTTGATACTGATGTGGAGCATT 59.362 41.667 0.00 0.00 38.06 3.56
2009 2232 3.550437 TTTGGGTTGGTTGATTGGTTG 57.450 42.857 0.00 0.00 0.00 3.77
2163 2388 6.127394 TGTGATGTAACAAATGCATTGCCTAT 60.127 34.615 13.82 3.48 43.13 2.57
2246 2471 3.189495 GCTCCTTGGAGCAGAAAGTTTAC 59.811 47.826 30.25 2.45 46.73 2.01
2554 2779 2.104792 TGTCAGGTCAACAGAGGGAAAG 59.895 50.000 0.00 0.00 0.00 2.62
2615 2840 8.094548 TGCTCATTATATGTTACAGATGGGTAC 58.905 37.037 2.42 0.00 0.00 3.34
2631 2856 7.390440 CAGATGGGTACATAAGTTTCAGAACAA 59.610 37.037 0.00 0.00 37.47 2.83
2784 3009 3.658757 TTAATTTGCTTGTGTGGCCTC 57.341 42.857 3.32 0.00 0.00 4.70
2981 3206 7.523293 TTCATTGGATGTCACTATTGTGTTT 57.477 32.000 7.18 0.00 44.14 2.83
2982 3207 7.523293 TCATTGGATGTCACTATTGTGTTTT 57.477 32.000 7.18 0.00 44.14 2.43
3045 3283 5.742453 GCACTATGATGCTTGTGATTTTCTG 59.258 40.000 0.00 0.00 42.62 3.02
3071 3309 5.882557 ACCAATGACTCTTGATTACATCACC 59.117 40.000 0.00 0.00 39.39 4.02
3136 3482 6.622427 ACCTATGTAGCTTTTCTAGGTTGT 57.378 37.500 9.82 0.00 39.24 3.32
3137 3483 7.017319 ACCTATGTAGCTTTTCTAGGTTGTT 57.983 36.000 9.82 0.00 39.24 2.83
3364 3716 6.406177 CGTTGATTTCTTCCATGGGATGAATT 60.406 38.462 13.02 9.98 42.62 2.17
3379 3731 4.514441 GGATGAATTACTGCCACTCATCAG 59.486 45.833 11.32 0.00 42.68 2.90
3698 4454 6.419710 CACGGAACCACTTTTTATTTTTCTCC 59.580 38.462 0.00 0.00 0.00 3.71
3749 4505 3.207265 ACGCATGGCAATACTCCATTA 57.793 42.857 0.00 0.00 42.11 1.90
4093 4855 7.482654 TCTTCATCGGATGCTAAGTTATTTG 57.517 36.000 13.15 0.00 0.00 2.32
4178 4940 9.087424 AGTTTGAACATGAAAAAGCTAAAAGAC 57.913 29.630 0.00 0.00 0.00 3.01
4726 5490 3.070878 TCCAACAGCAGTGTCTGAACATA 59.929 43.478 17.77 1.54 37.81 2.29
4732 5496 2.807967 GCAGTGTCTGAACATAGCACAA 59.192 45.455 0.66 0.00 37.81 3.33
4934 5698 0.172352 GGAGCACTCTCTGGTTCGAG 59.828 60.000 0.00 0.00 39.31 4.04
5289 6061 3.921677 AGCATTGGTTCAGCAAAATCAG 58.078 40.909 0.00 0.00 0.00 2.90
5291 6063 4.060205 GCATTGGTTCAGCAAAATCAGTT 58.940 39.130 0.00 0.00 0.00 3.16
5292 6064 4.084223 GCATTGGTTCAGCAAAATCAGTTG 60.084 41.667 0.00 0.00 0.00 3.16
5336 6143 9.561270 GAGGTGCTCTTCTTTATTTTTAATCAC 57.439 33.333 0.00 0.00 0.00 3.06
5372 6180 9.367444 ACATATTACGCTATTAATCTGCCTAAC 57.633 33.333 0.00 0.00 0.00 2.34
5467 6288 8.429641 TCTAAAGCTAAATAGTATTGTGGAGGG 58.570 37.037 0.00 0.00 0.00 4.30
5700 6606 4.689612 AGCACTTGAGACTTTAGGTTGA 57.310 40.909 0.00 0.00 0.00 3.18
5773 6688 1.909700 TTCCGGAGCAGCATCTTTTT 58.090 45.000 3.34 0.00 0.00 1.94
5889 6836 5.364778 TGACTTGGATATTAACATGACCCG 58.635 41.667 0.00 0.00 0.00 5.28
6028 7046 5.215252 TGTTCACAGAAGTTCTCCTAAGG 57.785 43.478 1.26 0.00 0.00 2.69
6326 7355 4.142600 CCAAACAATGTTAGCTCTACTGGC 60.143 45.833 0.00 0.00 0.00 4.85
6569 7609 8.874744 AGGAAGAGCTTATTATTAACTTCGAC 57.125 34.615 0.00 0.00 34.88 4.20
6917 7957 3.571401 ACTCACAGGCATTTTGAAAGGAG 59.429 43.478 0.00 0.00 0.00 3.69
6980 8020 4.593206 TGGAAAAGACTCTGAGCCTTCTAA 59.407 41.667 6.70 0.00 0.00 2.10
7038 8078 7.977853 AGCATGCCTGAAAGTATTGATAAAAAG 59.022 33.333 15.66 0.00 0.00 2.27
7177 8217 4.545610 GGATTCTGCTGATAGAAGAGACG 58.454 47.826 0.00 0.00 39.81 4.18
7203 8243 4.757149 GGAAAAGATGGGAATGACGATAGG 59.243 45.833 0.00 0.00 43.77 2.57
7423 8465 4.347000 AGTTGCCCTTTCTCTTGTGTACTA 59.653 41.667 0.00 0.00 0.00 1.82
7460 8510 2.039480 ACTGCAGAAAGAGCCATTCTCA 59.961 45.455 23.35 0.00 44.35 3.27
7643 8696 6.059484 TCATGAATGCTCAGAATCATGCTAA 58.941 36.000 9.19 0.00 45.48 3.09
7644 8697 6.204882 TCATGAATGCTCAGAATCATGCTAAG 59.795 38.462 9.19 0.00 45.48 2.18
7645 8698 4.820173 TGAATGCTCAGAATCATGCTAAGG 59.180 41.667 0.00 0.00 0.00 2.69
7646 8699 3.920231 TGCTCAGAATCATGCTAAGGT 57.080 42.857 0.00 0.00 0.00 3.50
7647 8700 3.538591 TGCTCAGAATCATGCTAAGGTG 58.461 45.455 0.00 0.00 0.00 4.00
7648 8701 2.877168 GCTCAGAATCATGCTAAGGTGG 59.123 50.000 0.00 0.00 0.00 4.61
7649 8702 2.877168 CTCAGAATCATGCTAAGGTGGC 59.123 50.000 0.00 0.00 0.00 5.01
7650 8703 2.507058 TCAGAATCATGCTAAGGTGGCT 59.493 45.455 0.00 0.00 0.00 4.75
7651 8704 2.877168 CAGAATCATGCTAAGGTGGCTC 59.123 50.000 0.00 0.00 0.00 4.70
7652 8705 2.776536 AGAATCATGCTAAGGTGGCTCT 59.223 45.455 0.00 0.00 0.00 4.09
7653 8706 2.634815 ATCATGCTAAGGTGGCTCTG 57.365 50.000 0.00 0.00 0.00 3.35
7654 8707 1.571955 TCATGCTAAGGTGGCTCTGA 58.428 50.000 0.00 0.00 0.00 3.27
7655 8708 1.908619 TCATGCTAAGGTGGCTCTGAA 59.091 47.619 0.00 0.00 0.00 3.02
7656 8709 2.305635 TCATGCTAAGGTGGCTCTGAAA 59.694 45.455 0.00 0.00 0.00 2.69
7657 8710 2.185004 TGCTAAGGTGGCTCTGAAAC 57.815 50.000 0.00 0.00 0.00 2.78
7658 8711 1.419762 TGCTAAGGTGGCTCTGAAACA 59.580 47.619 0.00 0.00 0.00 2.83
7659 8712 2.040278 TGCTAAGGTGGCTCTGAAACAT 59.960 45.455 0.00 0.00 0.00 2.71
7660 8713 2.680339 GCTAAGGTGGCTCTGAAACATC 59.320 50.000 0.00 0.00 0.00 3.06
7661 8714 2.957402 AAGGTGGCTCTGAAACATCA 57.043 45.000 0.00 0.00 0.00 3.07
7662 8715 2.486472 AGGTGGCTCTGAAACATCAG 57.514 50.000 0.00 0.00 39.00 2.90
7663 8716 1.701847 AGGTGGCTCTGAAACATCAGT 59.298 47.619 5.80 0.00 38.75 3.41
7664 8717 2.906389 AGGTGGCTCTGAAACATCAGTA 59.094 45.455 5.80 0.00 38.75 2.74
7665 8718 3.055530 AGGTGGCTCTGAAACATCAGTAG 60.056 47.826 5.80 4.07 38.75 2.57
7666 8719 3.307059 GGTGGCTCTGAAACATCAGTAGT 60.307 47.826 5.80 0.00 38.75 2.73
7667 8720 4.081642 GGTGGCTCTGAAACATCAGTAGTA 60.082 45.833 5.80 0.00 38.75 1.82
7668 8721 5.395768 GGTGGCTCTGAAACATCAGTAGTAT 60.396 44.000 5.80 0.00 38.75 2.12
7669 8722 6.109359 GTGGCTCTGAAACATCAGTAGTATT 58.891 40.000 5.80 0.00 38.75 1.89
7670 8723 6.595716 GTGGCTCTGAAACATCAGTAGTATTT 59.404 38.462 5.80 0.00 38.75 1.40
7671 8724 7.119846 GTGGCTCTGAAACATCAGTAGTATTTT 59.880 37.037 5.80 0.00 38.75 1.82
7672 8725 7.119699 TGGCTCTGAAACATCAGTAGTATTTTG 59.880 37.037 5.80 0.00 38.75 2.44
7673 8726 7.334421 GGCTCTGAAACATCAGTAGTATTTTGA 59.666 37.037 5.80 0.00 38.75 2.69
7674 8727 8.887717 GCTCTGAAACATCAGTAGTATTTTGAT 58.112 33.333 5.80 0.00 38.75 2.57
7748 8802 2.906389 AGGTGGCTCTGAAACATCAGTA 59.094 45.455 5.80 0.00 38.75 2.74
7852 8906 8.915654 CAAAGCTAAATAATGTTGGAACTGTTC 58.084 33.333 12.05 12.05 0.00 3.18
8126 9186 9.770097 TTGGTGTGAATTTTCAGCAATTTATAA 57.230 25.926 17.84 0.00 43.69 0.98
8174 9235 2.941720 GCTGTAGCTGATTTCTGGGAAG 59.058 50.000 0.00 0.00 38.21 3.46
8195 9256 0.694196 GGGTTAGTACAACAGGGCCA 59.306 55.000 6.18 0.00 0.00 5.36
8488 9554 3.329889 TGGCAGGGTCGGCATTCT 61.330 61.111 0.00 0.00 36.38 2.40
8762 9840 2.422093 GGATCTAGCCTCCAACAAAGGG 60.422 54.545 6.36 0.00 34.26 3.95
8767 9845 1.971695 CCTCCAACAAAGGGGACGC 60.972 63.158 0.00 0.00 0.00 5.19
8925 10004 9.507280 GCGTCCCTTTTTAACTATTTTATTACC 57.493 33.333 0.00 0.00 0.00 2.85
9003 10087 0.461870 TGGGACATGCTGCGATGTAC 60.462 55.000 14.95 14.95 36.67 2.90
9004 10088 0.179073 GGGACATGCTGCGATGTACT 60.179 55.000 19.61 2.15 37.34 2.73
9005 10089 1.212616 GGACATGCTGCGATGTACTC 58.787 55.000 15.62 6.87 36.67 2.59
9006 10090 1.212616 GACATGCTGCGATGTACTCC 58.787 55.000 14.60 3.20 36.67 3.85
9007 10091 0.179073 ACATGCTGCGATGTACTCCC 60.179 55.000 13.49 0.00 34.69 4.30
9008 10092 0.105593 CATGCTGCGATGTACTCCCT 59.894 55.000 0.00 0.00 0.00 4.20
9009 10093 0.390860 ATGCTGCGATGTACTCCCTC 59.609 55.000 0.00 0.00 0.00 4.30
9010 10094 1.068250 GCTGCGATGTACTCCCTCC 59.932 63.158 0.00 0.00 0.00 4.30
9011 10095 1.360551 CTGCGATGTACTCCCTCCG 59.639 63.158 0.00 0.00 0.00 4.63
9012 10096 1.379443 TGCGATGTACTCCCTCCGT 60.379 57.895 0.00 0.00 0.00 4.69
9013 10097 1.359475 GCGATGTACTCCCTCCGTC 59.641 63.158 0.00 0.00 0.00 4.79
9014 10098 2.031360 CGATGTACTCCCTCCGTCC 58.969 63.158 0.00 0.00 0.00 4.79
9015 10099 1.453762 CGATGTACTCCCTCCGTCCC 61.454 65.000 0.00 0.00 0.00 4.46
9016 10100 0.396695 GATGTACTCCCTCCGTCCCA 60.397 60.000 0.00 0.00 0.00 4.37
9017 10101 0.042131 ATGTACTCCCTCCGTCCCAA 59.958 55.000 0.00 0.00 0.00 4.12
9018 10102 0.178926 TGTACTCCCTCCGTCCCAAA 60.179 55.000 0.00 0.00 0.00 3.28
9019 10103 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
9020 10104 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
9021 10105 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
9022 10106 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
9023 10107 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
9024 10108 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
9025 10109 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
9026 10110 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
9027 10111 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
9028 10112 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
9029 10113 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
9030 10114 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
9031 10115 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
9032 10116 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
9033 10117 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
9034 10118 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
9035 10119 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
9036 10120 7.041644 CGTCCCAAAATAAGTGTCTCAACTTTA 60.042 37.037 0.00 0.00 40.77 1.85
9037 10121 8.793592 GTCCCAAAATAAGTGTCTCAACTTTAT 58.206 33.333 0.00 0.00 40.77 1.40
9046 10130 7.948034 AGTGTCTCAACTTTATACTAGCTCT 57.052 36.000 0.00 0.00 0.00 4.09
9047 10131 9.463902 AAGTGTCTCAACTTTATACTAGCTCTA 57.536 33.333 0.00 0.00 37.05 2.43
9048 10132 9.116067 AGTGTCTCAACTTTATACTAGCTCTAG 57.884 37.037 0.00 2.55 39.04 2.43
9076 10160 9.726438 ACAAATTTATACTAAGCTCAAGACACT 57.274 29.630 3.19 0.00 0.00 3.55
9084 10168 7.440523 ACTAAGCTCAAGACACTTATTTTGG 57.559 36.000 3.19 0.00 0.00 3.28
9085 10169 5.712152 AAGCTCAAGACACTTATTTTGGG 57.288 39.130 0.00 0.00 0.00 4.12
9086 10170 4.985538 AGCTCAAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
9087 10171 4.762251 AGCTCAAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
9088 10172 4.378459 GCTCAAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
9089 10173 4.069304 TCAAGACACTTATTTTGGGACGG 58.931 43.478 0.00 0.00 0.00 4.79
9090 10174 4.069304 CAAGACACTTATTTTGGGACGGA 58.931 43.478 0.00 0.00 0.00 4.69
9091 10175 4.569719 AGACACTTATTTTGGGACGGAT 57.430 40.909 0.00 0.00 0.00 4.18
9092 10176 4.261801 AGACACTTATTTTGGGACGGATG 58.738 43.478 0.00 0.00 0.00 3.51
9093 10177 3.352648 ACACTTATTTTGGGACGGATGG 58.647 45.455 0.00 0.00 0.00 3.51
9094 10178 3.009695 ACACTTATTTTGGGACGGATGGA 59.990 43.478 0.00 0.00 0.00 3.41
9095 10179 3.627577 CACTTATTTTGGGACGGATGGAG 59.372 47.826 0.00 0.00 0.00 3.86
9096 10180 3.265995 ACTTATTTTGGGACGGATGGAGT 59.734 43.478 0.00 0.00 0.00 3.85
9097 10181 4.472108 ACTTATTTTGGGACGGATGGAGTA 59.528 41.667 0.00 0.00 0.00 2.59
9126 10210 9.435688 TTTGTATTGTTATATATGCTCATCGCT 57.564 29.630 0.00 0.00 40.11 4.93
9148 10232 6.037610 CGCTTATCCCTGAATCATAATTAGGC 59.962 42.308 0.00 0.00 0.00 3.93
9153 10237 3.009033 CCTGAATCATAATTAGGCCGGGA 59.991 47.826 2.18 0.00 0.00 5.14
9182 10266 0.322456 TGCAGGCCTCCACATGTAAC 60.322 55.000 0.00 0.00 0.00 2.50
9190 10274 4.096382 GGCCTCCACATGTAACTTGTATTG 59.904 45.833 0.00 0.00 0.00 1.90
9193 10277 5.063438 CCTCCACATGTAACTTGTATTGTCG 59.937 44.000 0.00 0.00 0.00 4.35
9199 10283 7.276878 CACATGTAACTTGTATTGTCGTATGGA 59.723 37.037 0.00 0.00 0.00 3.41
9211 10295 4.178156 GTCGTATGGACACGCTAAAATG 57.822 45.455 0.00 0.00 45.36 2.32
9212 10296 3.615496 GTCGTATGGACACGCTAAAATGT 59.385 43.478 0.00 0.00 45.36 2.71
9311 10692 4.037089 ACGTTTTGTCCTTAATTGTGGGTC 59.963 41.667 0.00 0.00 0.00 4.46
9312 10693 4.036971 CGTTTTGTCCTTAATTGTGGGTCA 59.963 41.667 0.00 0.00 0.00 4.02
9333 10715 4.950475 TCAGTCAGTAGTTGGATGGTAGAG 59.050 45.833 0.00 0.00 0.00 2.43
9334 10716 4.950475 CAGTCAGTAGTTGGATGGTAGAGA 59.050 45.833 0.00 0.00 0.00 3.10
9354 10736 2.554806 AATGATGCTGATGTGCAACG 57.445 45.000 0.00 0.00 46.61 4.10
9361 10743 0.800631 CTGATGTGCAACGTGCTGAT 59.199 50.000 10.54 3.73 45.31 2.90
9372 10754 1.660607 ACGTGCTGATTGAATGCTACG 59.339 47.619 0.00 0.00 37.31 3.51
9374 10756 2.535534 CGTGCTGATTGAATGCTACGTG 60.536 50.000 0.00 0.00 31.79 4.49
9375 10757 2.416547 GTGCTGATTGAATGCTACGTGT 59.583 45.455 0.00 0.00 0.00 4.49
9376 10758 3.616821 GTGCTGATTGAATGCTACGTGTA 59.383 43.478 0.00 0.00 0.00 2.90
9378 10760 4.875536 TGCTGATTGAATGCTACGTGTATT 59.124 37.500 0.00 0.00 33.69 1.89
9386 10768 7.694388 TGAATGCTACGTGTATTTCAGTATC 57.306 36.000 0.00 0.00 31.17 2.24
9387 10769 6.700081 TGAATGCTACGTGTATTTCAGTATCC 59.300 38.462 0.00 0.00 31.17 2.59
9390 10772 4.910456 GCTACGTGTATTTCAGTATCCGAG 59.090 45.833 0.00 0.00 0.00 4.63
9395 10777 4.267928 GTGTATTTCAGTATCCGAGCACAC 59.732 45.833 0.00 0.00 0.00 3.82
9427 10809 2.306805 ACATCTCCAACTGCCTCATCAA 59.693 45.455 0.00 0.00 0.00 2.57
9434 10816 4.080413 TCCAACTGCCTCATCAATGATACA 60.080 41.667 0.00 0.00 36.02 2.29
9435 10817 4.275196 CCAACTGCCTCATCAATGATACAG 59.725 45.833 15.50 15.50 41.56 2.74
9436 10818 5.121105 CAACTGCCTCATCAATGATACAGA 58.879 41.667 20.54 2.74 39.80 3.41
9437 10819 4.701765 ACTGCCTCATCAATGATACAGAC 58.298 43.478 20.54 2.57 39.80 3.51
9439 10821 3.132824 TGCCTCATCAATGATACAGACGT 59.867 43.478 0.00 0.00 36.02 4.34
9440 10822 3.492383 GCCTCATCAATGATACAGACGTG 59.508 47.826 0.00 0.00 36.02 4.49
9441 10823 4.737649 GCCTCATCAATGATACAGACGTGA 60.738 45.833 0.00 0.00 36.02 4.35
9442 10824 5.351458 CCTCATCAATGATACAGACGTGAA 58.649 41.667 0.00 0.00 36.02 3.18
9458 11267 6.693545 CAGACGTGAACTTTCCTACAGATATC 59.306 42.308 0.00 0.00 0.00 1.63
9460 11269 4.441415 CGTGAACTTTCCTACAGATATCGC 59.559 45.833 0.00 0.00 0.00 4.58
9461 11270 4.745620 GTGAACTTTCCTACAGATATCGCC 59.254 45.833 0.00 0.00 0.00 5.54
9463 11272 4.592485 ACTTTCCTACAGATATCGCCAG 57.408 45.455 0.00 0.00 0.00 4.85
9464 11273 3.322254 ACTTTCCTACAGATATCGCCAGG 59.678 47.826 11.32 11.32 0.00 4.45
9466 11275 3.458044 TCCTACAGATATCGCCAGGAT 57.542 47.619 14.60 0.00 39.25 3.24
9467 11276 4.586306 TCCTACAGATATCGCCAGGATA 57.414 45.455 14.60 0.00 41.71 2.59
9468 11277 4.930696 TCCTACAGATATCGCCAGGATAA 58.069 43.478 14.60 0.00 40.87 1.75
9469 11278 5.519808 TCCTACAGATATCGCCAGGATAAT 58.480 41.667 14.60 0.00 40.87 1.28
9470 11279 5.594725 TCCTACAGATATCGCCAGGATAATC 59.405 44.000 14.60 0.00 40.87 1.75
9471 11280 5.360999 CCTACAGATATCGCCAGGATAATCA 59.639 44.000 11.89 0.00 40.87 2.57
9472 11281 5.078411 ACAGATATCGCCAGGATAATCAC 57.922 43.478 0.00 0.00 40.87 3.06
9473 11282 4.081420 ACAGATATCGCCAGGATAATCACC 60.081 45.833 0.00 0.00 40.87 4.02
9482 11291 4.627611 CAGGATAATCACCTGTTTGCTG 57.372 45.455 0.00 0.00 46.71 4.41
9483 11292 4.012374 CAGGATAATCACCTGTTTGCTGT 58.988 43.478 0.00 0.00 46.71 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 1.285641 GCGACCACCACCACATTTG 59.714 57.895 0.00 0.00 0.00 2.32
13 14 1.901464 GGCGACCACCACCACATTT 60.901 57.895 0.00 0.00 0.00 2.32
14 15 2.282180 GGCGACCACCACCACATT 60.282 61.111 0.00 0.00 0.00 2.71
15 16 4.697756 CGGCGACCACCACCACAT 62.698 66.667 0.00 0.00 0.00 3.21
26 27 4.166011 GTCAAGCATGGCGGCGAC 62.166 66.667 12.98 9.31 39.27 5.19
27 28 4.695993 TGTCAAGCATGGCGGCGA 62.696 61.111 12.98 0.00 39.27 5.54
28 29 2.924922 GATTGTCAAGCATGGCGGCG 62.925 60.000 0.51 0.51 39.27 6.46
29 30 1.226773 GATTGTCAAGCATGGCGGC 60.227 57.895 0.00 0.00 32.34 6.53
30 31 0.099968 CTGATTGTCAAGCATGGCGG 59.900 55.000 3.58 0.00 32.34 6.13
31 32 0.524816 GCTGATTGTCAAGCATGGCG 60.525 55.000 3.58 0.00 32.34 5.69
32 33 0.528924 TGCTGATTGTCAAGCATGGC 59.471 50.000 3.58 6.07 29.93 4.40
33 34 2.991190 GTTTGCTGATTGTCAAGCATGG 59.009 45.455 3.58 0.00 33.16 3.66
34 35 3.909430 AGTTTGCTGATTGTCAAGCATG 58.091 40.909 3.58 0.43 33.16 4.06
35 36 4.763793 AGTAGTTTGCTGATTGTCAAGCAT 59.236 37.500 3.58 0.00 33.16 3.79
36 37 4.136796 AGTAGTTTGCTGATTGTCAAGCA 58.863 39.130 3.09 3.09 31.91 3.91
37 38 4.756084 AGTAGTTTGCTGATTGTCAAGC 57.244 40.909 0.00 0.00 0.00 4.01
38 39 5.471456 AGGAAGTAGTTTGCTGATTGTCAAG 59.529 40.000 0.00 0.00 35.96 3.02
39 40 5.376625 AGGAAGTAGTTTGCTGATTGTCAA 58.623 37.500 0.00 0.00 35.96 3.18
40 41 4.973168 AGGAAGTAGTTTGCTGATTGTCA 58.027 39.130 0.00 0.00 35.96 3.58
41 42 4.393371 GGAGGAAGTAGTTTGCTGATTGTC 59.607 45.833 0.00 0.00 37.61 3.18
42 43 4.042187 AGGAGGAAGTAGTTTGCTGATTGT 59.958 41.667 0.00 0.00 37.61 2.71
43 44 4.583871 AGGAGGAAGTAGTTTGCTGATTG 58.416 43.478 0.00 0.00 37.61 2.67
44 45 4.323868 GGAGGAGGAAGTAGTTTGCTGATT 60.324 45.833 0.00 0.00 37.61 2.57
45 46 3.198853 GGAGGAGGAAGTAGTTTGCTGAT 59.801 47.826 0.00 0.00 37.61 2.90
46 47 2.567615 GGAGGAGGAAGTAGTTTGCTGA 59.432 50.000 0.00 0.00 37.61 4.26
47 48 2.303022 TGGAGGAGGAAGTAGTTTGCTG 59.697 50.000 0.00 0.00 37.61 4.41
48 49 2.621070 TGGAGGAGGAAGTAGTTTGCT 58.379 47.619 0.00 0.00 40.54 3.91
49 50 3.636153 ATGGAGGAGGAAGTAGTTTGC 57.364 47.619 0.00 0.00 0.00 3.68
50 51 4.184629 CGAATGGAGGAGGAAGTAGTTTG 58.815 47.826 0.00 0.00 0.00 2.93
51 52 3.838903 ACGAATGGAGGAGGAAGTAGTTT 59.161 43.478 0.00 0.00 0.00 2.66
52 53 3.442076 ACGAATGGAGGAGGAAGTAGTT 58.558 45.455 0.00 0.00 0.00 2.24
53 54 3.025262 GACGAATGGAGGAGGAAGTAGT 58.975 50.000 0.00 0.00 0.00 2.73
54 55 2.362717 GGACGAATGGAGGAGGAAGTAG 59.637 54.545 0.00 0.00 0.00 2.57
55 56 2.024273 AGGACGAATGGAGGAGGAAGTA 60.024 50.000 0.00 0.00 0.00 2.24
56 57 1.196012 GGACGAATGGAGGAGGAAGT 58.804 55.000 0.00 0.00 0.00 3.01
57 58 1.490574 AGGACGAATGGAGGAGGAAG 58.509 55.000 0.00 0.00 0.00 3.46
58 59 1.952621 AAGGACGAATGGAGGAGGAA 58.047 50.000 0.00 0.00 0.00 3.36
59 60 1.831736 GAAAGGACGAATGGAGGAGGA 59.168 52.381 0.00 0.00 0.00 3.71
60 61 1.134371 GGAAAGGACGAATGGAGGAGG 60.134 57.143 0.00 0.00 0.00 4.30
61 62 1.134371 GGGAAAGGACGAATGGAGGAG 60.134 57.143 0.00 0.00 0.00 3.69
62 63 0.909623 GGGAAAGGACGAATGGAGGA 59.090 55.000 0.00 0.00 0.00 3.71
63 64 0.912486 AGGGAAAGGACGAATGGAGG 59.088 55.000 0.00 0.00 0.00 4.30
64 65 1.134371 GGAGGGAAAGGACGAATGGAG 60.134 57.143 0.00 0.00 0.00 3.86
65 66 0.909623 GGAGGGAAAGGACGAATGGA 59.090 55.000 0.00 0.00 0.00 3.41
66 67 0.912486 AGGAGGGAAAGGACGAATGG 59.088 55.000 0.00 0.00 0.00 3.16
67 68 2.633488 GAAGGAGGGAAAGGACGAATG 58.367 52.381 0.00 0.00 0.00 2.67
68 69 1.560146 GGAAGGAGGGAAAGGACGAAT 59.440 52.381 0.00 0.00 0.00 3.34
69 70 0.981943 GGAAGGAGGGAAAGGACGAA 59.018 55.000 0.00 0.00 0.00 3.85
70 71 0.116541 AGGAAGGAGGGAAAGGACGA 59.883 55.000 0.00 0.00 0.00 4.20
71 72 0.537653 GAGGAAGGAGGGAAAGGACG 59.462 60.000 0.00 0.00 0.00 4.79
72 73 1.834896 GAGAGGAAGGAGGGAAAGGAC 59.165 57.143 0.00 0.00 0.00 3.85
73 74 1.437149 TGAGAGGAAGGAGGGAAAGGA 59.563 52.381 0.00 0.00 0.00 3.36
74 75 1.557371 GTGAGAGGAAGGAGGGAAAGG 59.443 57.143 0.00 0.00 0.00 3.11
75 76 1.557371 GGTGAGAGGAAGGAGGGAAAG 59.443 57.143 0.00 0.00 0.00 2.62
76 77 1.132527 TGGTGAGAGGAAGGAGGGAAA 60.133 52.381 0.00 0.00 0.00 3.13
77 78 0.491823 TGGTGAGAGGAAGGAGGGAA 59.508 55.000 0.00 0.00 0.00 3.97
78 79 0.252284 GTGGTGAGAGGAAGGAGGGA 60.252 60.000 0.00 0.00 0.00 4.20
79 80 1.268283 GGTGGTGAGAGGAAGGAGGG 61.268 65.000 0.00 0.00 0.00 4.30
80 81 0.545309 TGGTGGTGAGAGGAAGGAGG 60.545 60.000 0.00 0.00 0.00 4.30
81 82 1.352083 TTGGTGGTGAGAGGAAGGAG 58.648 55.000 0.00 0.00 0.00 3.69
82 83 2.040278 CAATTGGTGGTGAGAGGAAGGA 59.960 50.000 0.00 0.00 0.00 3.36
83 84 2.440409 CAATTGGTGGTGAGAGGAAGG 58.560 52.381 0.00 0.00 0.00 3.46
84 85 1.815003 GCAATTGGTGGTGAGAGGAAG 59.185 52.381 7.72 0.00 0.00 3.46
85 86 1.144708 TGCAATTGGTGGTGAGAGGAA 59.855 47.619 7.72 0.00 0.00 3.36
86 87 0.770499 TGCAATTGGTGGTGAGAGGA 59.230 50.000 7.72 0.00 0.00 3.71
87 88 0.883833 GTGCAATTGGTGGTGAGAGG 59.116 55.000 7.72 0.00 0.00 3.69
88 89 1.608055 TGTGCAATTGGTGGTGAGAG 58.392 50.000 7.72 0.00 0.00 3.20
89 90 2.161855 GATGTGCAATTGGTGGTGAGA 58.838 47.619 7.72 0.00 0.00 3.27
90 91 1.887854 TGATGTGCAATTGGTGGTGAG 59.112 47.619 7.72 0.00 0.00 3.51
91 92 1.612950 GTGATGTGCAATTGGTGGTGA 59.387 47.619 7.72 0.00 0.00 4.02
92 93 1.666599 CGTGATGTGCAATTGGTGGTG 60.667 52.381 7.72 0.00 0.00 4.17
93 94 0.597568 CGTGATGTGCAATTGGTGGT 59.402 50.000 7.72 0.00 0.00 4.16
94 95 0.733566 GCGTGATGTGCAATTGGTGG 60.734 55.000 7.72 0.00 0.00 4.61
95 96 0.039346 TGCGTGATGTGCAATTGGTG 60.039 50.000 7.72 0.00 39.87 4.17
96 97 0.672889 TTGCGTGATGTGCAATTGGT 59.327 45.000 7.72 0.00 46.62 3.67
97 98 3.493351 TTGCGTGATGTGCAATTGG 57.507 47.368 7.72 0.00 46.62 3.16
122 123 9.791820 CATGAAGTGACAATAATTTGCTGAATA 57.208 29.630 0.00 0.00 36.22 1.75
123 124 8.525316 TCATGAAGTGACAATAATTTGCTGAAT 58.475 29.630 0.00 0.00 36.22 2.57
124 125 7.884257 TCATGAAGTGACAATAATTTGCTGAA 58.116 30.769 0.00 0.00 36.22 3.02
125 126 7.451501 TCATGAAGTGACAATAATTTGCTGA 57.548 32.000 0.00 0.00 36.22 4.26
126 127 8.024865 TCTTCATGAAGTGACAATAATTTGCTG 58.975 33.333 29.80 4.16 39.38 4.41
127 128 8.025445 GTCTTCATGAAGTGACAATAATTTGCT 58.975 33.333 29.80 0.00 39.38 3.91
128 129 7.809331 TGTCTTCATGAAGTGACAATAATTTGC 59.191 33.333 29.80 2.89 39.38 3.68
129 130 9.850628 ATGTCTTCATGAAGTGACAATAATTTG 57.149 29.630 29.80 5.44 39.38 2.32
161 162 9.255304 GCTGAAATATGACCAAAACTTTGTAAA 57.745 29.630 1.76 0.00 36.45 2.01
162 163 7.593273 CGCTGAAATATGACCAAAACTTTGTAA 59.407 33.333 1.76 0.00 36.45 2.41
163 164 7.041030 TCGCTGAAATATGACCAAAACTTTGTA 60.041 33.333 1.76 0.00 36.45 2.41
164 165 5.920273 CGCTGAAATATGACCAAAACTTTGT 59.080 36.000 1.76 0.00 36.45 2.83
165 166 6.148948 TCGCTGAAATATGACCAAAACTTTG 58.851 36.000 0.00 0.00 37.90 2.77
166 167 6.325919 TCGCTGAAATATGACCAAAACTTT 57.674 33.333 0.00 0.00 0.00 2.66
167 168 5.957842 TCGCTGAAATATGACCAAAACTT 57.042 34.783 0.00 0.00 0.00 2.66
168 169 5.957842 TTCGCTGAAATATGACCAAAACT 57.042 34.783 0.00 0.00 0.00 2.66
169 170 7.581011 AATTTCGCTGAAATATGACCAAAAC 57.419 32.000 14.08 0.00 40.77 2.43
170 171 8.087750 AGAAATTTCGCTGAAATATGACCAAAA 58.912 29.630 12.42 0.00 40.77 2.44
171 172 7.601856 AGAAATTTCGCTGAAATATGACCAAA 58.398 30.769 12.42 0.00 40.77 3.28
172 173 7.156876 AGAAATTTCGCTGAAATATGACCAA 57.843 32.000 12.42 0.00 40.77 3.67
173 174 6.757897 AGAAATTTCGCTGAAATATGACCA 57.242 33.333 12.42 0.00 40.77 4.02
174 175 6.020360 GCAAGAAATTTCGCTGAAATATGACC 60.020 38.462 20.88 3.27 40.77 4.02
175 176 6.749118 AGCAAGAAATTTCGCTGAAATATGAC 59.251 34.615 20.88 6.44 40.77 3.06
176 177 6.855836 AGCAAGAAATTTCGCTGAAATATGA 58.144 32.000 20.88 0.00 40.77 2.15
177 178 6.748658 TGAGCAAGAAATTTCGCTGAAATATG 59.251 34.615 20.84 12.10 40.77 1.78
178 179 6.749118 GTGAGCAAGAAATTTCGCTGAAATAT 59.251 34.615 20.84 0.73 40.77 1.28
179 180 6.086222 GTGAGCAAGAAATTTCGCTGAAATA 58.914 36.000 20.84 5.91 40.77 1.40
180 181 4.919754 GTGAGCAAGAAATTTCGCTGAAAT 59.080 37.500 20.84 9.68 43.07 2.17
181 182 4.290155 GTGAGCAAGAAATTTCGCTGAAA 58.710 39.130 20.84 7.58 35.94 2.69
182 183 3.304659 GGTGAGCAAGAAATTTCGCTGAA 60.305 43.478 20.84 9.53 34.12 3.02
183 184 2.226437 GGTGAGCAAGAAATTTCGCTGA 59.774 45.455 20.84 12.63 34.12 4.26
184 185 2.589014 GGTGAGCAAGAAATTTCGCTG 58.411 47.619 20.84 17.92 34.12 5.18
185 186 1.541588 GGGTGAGCAAGAAATTTCGCT 59.458 47.619 17.26 17.26 37.44 4.93
186 187 1.541588 AGGGTGAGCAAGAAATTTCGC 59.458 47.619 12.42 10.73 0.00 4.70
187 188 2.813754 TGAGGGTGAGCAAGAAATTTCG 59.186 45.455 12.42 0.84 0.00 3.46
188 189 3.366781 GCTGAGGGTGAGCAAGAAATTTC 60.367 47.826 10.33 10.33 36.40 2.17
189 190 2.560105 GCTGAGGGTGAGCAAGAAATTT 59.440 45.455 0.00 0.00 36.40 1.82
190 191 2.165998 GCTGAGGGTGAGCAAGAAATT 58.834 47.619 0.00 0.00 36.40 1.82
191 192 1.074405 TGCTGAGGGTGAGCAAGAAAT 59.926 47.619 0.00 0.00 43.47 2.17
192 193 0.473755 TGCTGAGGGTGAGCAAGAAA 59.526 50.000 0.00 0.00 43.47 2.52
193 194 2.144952 TGCTGAGGGTGAGCAAGAA 58.855 52.632 0.00 0.00 43.47 2.52
194 195 3.890313 TGCTGAGGGTGAGCAAGA 58.110 55.556 0.00 0.00 43.47 3.02
197 198 0.321671 GTAAGTGCTGAGGGTGAGCA 59.678 55.000 0.00 0.00 44.22 4.26
198 199 0.391793 GGTAAGTGCTGAGGGTGAGC 60.392 60.000 0.00 0.00 36.95 4.26
199 200 0.250513 GGGTAAGTGCTGAGGGTGAG 59.749 60.000 0.00 0.00 0.00 3.51
200 201 1.198759 GGGGTAAGTGCTGAGGGTGA 61.199 60.000 0.00 0.00 0.00 4.02
201 202 1.299976 GGGGTAAGTGCTGAGGGTG 59.700 63.158 0.00 0.00 0.00 4.61
202 203 1.923909 GGGGGTAAGTGCTGAGGGT 60.924 63.158 0.00 0.00 0.00 4.34
203 204 1.497309 TTGGGGGTAAGTGCTGAGGG 61.497 60.000 0.00 0.00 0.00 4.30
204 205 0.404040 TTTGGGGGTAAGTGCTGAGG 59.596 55.000 0.00 0.00 0.00 3.86
205 206 2.369394 GATTTGGGGGTAAGTGCTGAG 58.631 52.381 0.00 0.00 0.00 3.35
206 207 1.005450 GGATTTGGGGGTAAGTGCTGA 59.995 52.381 0.00 0.00 0.00 4.26
207 208 1.005924 AGGATTTGGGGGTAAGTGCTG 59.994 52.381 0.00 0.00 0.00 4.41
208 209 1.285078 GAGGATTTGGGGGTAAGTGCT 59.715 52.381 0.00 0.00 0.00 4.40
209 210 1.285078 AGAGGATTTGGGGGTAAGTGC 59.715 52.381 0.00 0.00 0.00 4.40
210 211 3.621558 GAAGAGGATTTGGGGGTAAGTG 58.378 50.000 0.00 0.00 0.00 3.16
211 212 2.581246 GGAAGAGGATTTGGGGGTAAGT 59.419 50.000 0.00 0.00 0.00 2.24
212 213 2.580783 TGGAAGAGGATTTGGGGGTAAG 59.419 50.000 0.00 0.00 0.00 2.34
213 214 2.650013 TGGAAGAGGATTTGGGGGTAA 58.350 47.619 0.00 0.00 0.00 2.85
214 215 2.369668 TGGAAGAGGATTTGGGGGTA 57.630 50.000 0.00 0.00 0.00 3.69
215 216 1.288932 CATGGAAGAGGATTTGGGGGT 59.711 52.381 0.00 0.00 0.00 4.95
216 217 1.288932 ACATGGAAGAGGATTTGGGGG 59.711 52.381 0.00 0.00 0.00 5.40
217 218 2.834638 ACATGGAAGAGGATTTGGGG 57.165 50.000 0.00 0.00 0.00 4.96
218 219 4.235079 TGTACATGGAAGAGGATTTGGG 57.765 45.455 0.00 0.00 0.00 4.12
219 220 5.530171 CAGATGTACATGGAAGAGGATTTGG 59.470 44.000 14.43 0.00 0.00 3.28
220 221 5.530171 CCAGATGTACATGGAAGAGGATTTG 59.470 44.000 14.43 0.00 39.02 2.32
221 222 5.398353 CCCAGATGTACATGGAAGAGGATTT 60.398 44.000 14.43 0.00 39.02 2.17
222 223 4.103785 CCCAGATGTACATGGAAGAGGATT 59.896 45.833 14.43 0.00 39.02 3.01
223 224 3.649981 CCCAGATGTACATGGAAGAGGAT 59.350 47.826 14.43 0.00 39.02 3.24
224 225 3.041211 CCCAGATGTACATGGAAGAGGA 58.959 50.000 14.43 0.00 39.02 3.71
225 226 2.486191 GCCCAGATGTACATGGAAGAGG 60.486 54.545 14.43 6.36 39.02 3.69
226 227 2.486191 GGCCCAGATGTACATGGAAGAG 60.486 54.545 14.43 0.00 39.02 2.85
227 228 1.490490 GGCCCAGATGTACATGGAAGA 59.510 52.381 14.43 0.00 39.02 2.87
232 233 2.260844 AATCGGCCCAGATGTACATG 57.739 50.000 14.43 0.58 0.00 3.21
233 234 2.575532 CAAATCGGCCCAGATGTACAT 58.424 47.619 8.43 8.43 0.00 2.29
235 236 0.663153 GCAAATCGGCCCAGATGTAC 59.337 55.000 0.00 0.00 0.00 2.90
359 371 2.657237 GTCTGGTCTGGTCGGGTG 59.343 66.667 0.00 0.00 0.00 4.61
360 372 2.603776 GGTCTGGTCTGGTCGGGT 60.604 66.667 0.00 0.00 0.00 5.28
361 373 2.603473 TGGTCTGGTCTGGTCGGG 60.603 66.667 0.00 0.00 0.00 5.14
362 374 1.606601 TCTGGTCTGGTCTGGTCGG 60.607 63.158 0.00 0.00 0.00 4.79
363 375 1.587054 GTCTGGTCTGGTCTGGTCG 59.413 63.158 0.00 0.00 0.00 4.79
364 376 0.832135 TGGTCTGGTCTGGTCTGGTC 60.832 60.000 0.00 0.00 0.00 4.02
365 377 0.833834 CTGGTCTGGTCTGGTCTGGT 60.834 60.000 0.00 0.00 0.00 4.00
366 378 1.548357 CCTGGTCTGGTCTGGTCTGG 61.548 65.000 0.00 0.00 0.00 3.86
367 379 0.542938 TCCTGGTCTGGTCTGGTCTG 60.543 60.000 0.00 0.00 0.00 3.51
368 380 0.543174 GTCCTGGTCTGGTCTGGTCT 60.543 60.000 0.00 0.00 0.00 3.85
1338 1466 4.333372 ACAAAACCACCGGCTTATATAACG 59.667 41.667 0.00 0.00 0.00 3.18
1350 1479 2.458951 CACAATGTCACAAAACCACCG 58.541 47.619 0.00 0.00 0.00 4.94
1479 1676 1.986698 ATCACAAAATTGCTGCGAGC 58.013 45.000 0.00 1.70 42.82 5.03
1494 1691 6.884836 ACTCCAAACCAGGATAACTAAATCAC 59.115 38.462 0.00 0.00 36.99 3.06
1588 1785 4.938832 CAGGTAAAAACACGTCCATATGGA 59.061 41.667 20.98 20.98 43.08 3.41
1853 2058 9.008965 GCATTACAATACCCACATATCATAACA 57.991 33.333 0.00 0.00 0.00 2.41
2009 2232 5.290885 CAGGCAAAAGAAAAACAGTGTAACC 59.709 40.000 0.00 0.00 37.80 2.85
2554 2779 6.806739 GGACATGTTACCTTGCAAATAGTTTC 59.193 38.462 0.00 0.00 0.00 2.78
2631 2856 9.878667 CTCTATCTGCAATATCATCTTCAGATT 57.121 33.333 7.69 0.00 40.48 2.40
2784 3009 3.175109 GGGTACACCTAATTCTGACGG 57.825 52.381 0.00 0.00 35.85 4.79
2981 3206 4.463891 GGATTTTCTGCTCCATTTGAGGAA 59.536 41.667 0.00 0.00 41.33 3.36
2982 3207 4.019174 GGATTTTCTGCTCCATTTGAGGA 58.981 43.478 0.00 0.00 41.73 3.71
3135 3481 5.648092 ACTACATGCCACAGGAATTAAGAAC 59.352 40.000 0.00 0.00 0.00 3.01
3136 3482 5.815581 ACTACATGCCACAGGAATTAAGAA 58.184 37.500 0.00 0.00 0.00 2.52
3137 3483 5.435686 ACTACATGCCACAGGAATTAAGA 57.564 39.130 0.00 0.00 0.00 2.10
3749 4505 9.507329 AATCTATACGCACTCCATTATGAAATT 57.493 29.630 0.00 0.00 0.00 1.82
4178 4940 9.467258 AGAAATGTTATTGATGTGTTTGTGAAG 57.533 29.630 0.00 0.00 0.00 3.02
4726 5490 3.890756 TGAGTTGATGTTGGAATTGTGCT 59.109 39.130 0.00 0.00 0.00 4.40
4732 5496 5.128171 CCCATGATTGAGTTGATGTTGGAAT 59.872 40.000 0.00 0.00 0.00 3.01
4836 5600 3.873361 CCACTGTATCAATGACGCAAGAT 59.127 43.478 0.00 0.00 43.62 2.40
4934 5698 0.677731 TGCTGCAGGTGGAACATAGC 60.678 55.000 17.12 0.00 44.52 2.97
5336 6143 9.836076 TTAATAGCGTAATATGTACTGCACTAG 57.164 33.333 0.00 0.00 0.00 2.57
5372 6180 0.166597 ACGCATGCAAGTGAATCACG 59.833 50.000 19.57 0.00 39.64 4.35
5467 6288 9.706846 GTCCAAAAATCATTATGCATTTAAAGC 57.293 29.630 3.54 0.00 0.00 3.51
5609 6498 8.689061 CCATTTCTCTCACCATTATGAAATCAA 58.311 33.333 0.00 0.00 33.56 2.57
5700 6606 7.431249 CCAGTACAGTAATACCGTATGACAAT 58.569 38.462 8.50 0.00 0.00 2.71
5773 6688 4.085357 AGCAAACATGTGTACAGAGGAA 57.915 40.909 11.98 0.00 0.00 3.36
5791 6706 2.038426 TCGACCAGATCCAAAAGAAGCA 59.962 45.455 0.00 0.00 0.00 3.91
5889 6836 5.065218 AGTCCAGTACATCGATTTGAAATGC 59.935 40.000 0.00 0.00 0.00 3.56
6326 7355 1.134098 AGCCCATTACCATCAGAACGG 60.134 52.381 0.00 0.00 0.00 4.44
6917 7957 7.011295 CCTCTTTAAGATCTTTCTCATGACTGC 59.989 40.741 14.36 0.00 0.00 4.40
7025 8065 7.399245 TTGTAGGTGCCCTTTTTATCAATAC 57.601 36.000 0.00 0.00 34.61 1.89
7038 8078 2.437413 CTTTCCTCTTTGTAGGTGCCC 58.563 52.381 0.00 0.00 37.91 5.36
7058 8098 1.453928 GCATACCTGCCAGAACCCC 60.454 63.158 0.00 0.00 42.88 4.95
7177 8217 4.766375 TCGTCATTCCCATCTTTTCCTAC 58.234 43.478 0.00 0.00 0.00 3.18
7203 8243 5.643777 TGAGCTCTTAGTAATTTGCCTTGAC 59.356 40.000 16.19 0.00 0.00 3.18
7460 8510 4.702131 GTGAGGGAGACATGCTGTTTTTAT 59.298 41.667 0.00 0.00 0.00 1.40
7658 8711 8.758829 TGTCTACCACATCAAAATACTACTGAT 58.241 33.333 0.00 0.00 0.00 2.90
7659 8712 8.129496 TGTCTACCACATCAAAATACTACTGA 57.871 34.615 0.00 0.00 0.00 3.41
7660 8713 8.948631 ATGTCTACCACATCAAAATACTACTG 57.051 34.615 0.00 0.00 42.62 2.74
7674 8727 6.950842 AGAAATGAGATTGATGTCTACCACA 58.049 36.000 0.00 0.00 40.18 4.17
7675 8728 7.010923 GTGAGAAATGAGATTGATGTCTACCAC 59.989 40.741 0.00 0.00 0.00 4.16
7676 8729 7.044181 GTGAGAAATGAGATTGATGTCTACCA 58.956 38.462 0.00 0.00 0.00 3.25
7677 8730 6.481644 GGTGAGAAATGAGATTGATGTCTACC 59.518 42.308 0.00 0.00 0.00 3.18
7678 8731 7.044181 TGGTGAGAAATGAGATTGATGTCTAC 58.956 38.462 0.00 0.00 0.00 2.59
8174 9235 1.612462 GGCCCTGTTGTACTAACCCAC 60.612 57.143 0.00 0.00 0.00 4.61
8251 9312 8.936864 ACAAAATCCAAAACACAAATTTTCGTA 58.063 25.926 0.00 0.00 29.54 3.43
8253 9314 9.760660 TTACAAAATCCAAAACACAAATTTTCG 57.239 25.926 0.00 0.00 29.54 3.46
8259 9321 8.097662 AGGTTCTTACAAAATCCAAAACACAAA 58.902 29.630 0.00 0.00 0.00 2.83
8319 9382 6.597672 TCTTAAGTTGACACAACACAAGACAT 59.402 34.615 18.00 0.00 0.00 3.06
8357 9420 5.576447 TTCAAAGAAGTTCCAGGTGAAAC 57.424 39.130 0.00 0.00 33.94 2.78
8394 9457 5.009610 TGGAGGCTTGAATGTTTGTTCTAAC 59.990 40.000 0.00 0.00 0.00 2.34
8403 9466 2.731572 CCTCATGGAGGCTTGAATGTT 58.268 47.619 0.00 0.00 43.29 2.71
8404 9467 2.431954 CCTCATGGAGGCTTGAATGT 57.568 50.000 0.00 0.00 43.29 2.71
8488 9554 2.891580 GGTCTAGGATGAAGCACGGATA 59.108 50.000 0.00 0.00 0.00 2.59
8762 9840 3.429141 TGAGTCGTCGAGGCGTCC 61.429 66.667 0.00 0.00 0.00 4.79
8864 9942 2.561478 TGAAGTCCCCTGCTTGTAAC 57.439 50.000 0.00 0.00 0.00 2.50
8865 9943 4.919774 TTATGAAGTCCCCTGCTTGTAA 57.080 40.909 0.00 0.00 0.00 2.41
8925 10004 5.256474 ACATGACCCCAAGAGAAAATACAG 58.744 41.667 0.00 0.00 0.00 2.74
9003 10087 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
9004 10088 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
9005 10089 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
9006 10090 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
9007 10091 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
9008 10092 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
9009 10093 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
9010 10094 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
9011 10095 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
9012 10096 8.934023 ATAAAGTTGAGACACTTATTTTGGGA 57.066 30.769 0.00 0.00 35.87 4.37
9020 10104 9.463902 AGAGCTAGTATAAAGTTGAGACACTTA 57.536 33.333 0.00 0.00 35.87 2.24
9021 10105 8.356000 AGAGCTAGTATAAAGTTGAGACACTT 57.644 34.615 0.00 0.00 38.74 3.16
9022 10106 7.948034 AGAGCTAGTATAAAGTTGAGACACT 57.052 36.000 0.00 0.00 0.00 3.55
9023 10107 8.895737 ACTAGAGCTAGTATAAAGTTGAGACAC 58.104 37.037 8.35 0.00 43.98 3.67
9050 10134 9.726438 AGTGTCTTGAGCTTAGTATAAATTTGT 57.274 29.630 0.00 0.00 0.00 2.83
9058 10142 9.167311 CCAAAATAAGTGTCTTGAGCTTAGTAT 57.833 33.333 0.00 0.00 0.00 2.12
9059 10143 7.606456 CCCAAAATAAGTGTCTTGAGCTTAGTA 59.394 37.037 0.00 0.00 0.00 1.82
9060 10144 6.431234 CCCAAAATAAGTGTCTTGAGCTTAGT 59.569 38.462 0.00 0.00 0.00 2.24
9061 10145 6.655003 TCCCAAAATAAGTGTCTTGAGCTTAG 59.345 38.462 0.00 0.00 0.00 2.18
9062 10146 6.430000 GTCCCAAAATAAGTGTCTTGAGCTTA 59.570 38.462 0.00 0.00 0.00 3.09
9063 10147 5.241728 GTCCCAAAATAAGTGTCTTGAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
9064 10148 4.762251 GTCCCAAAATAAGTGTCTTGAGCT 59.238 41.667 0.00 0.00 0.00 4.09
9065 10149 4.378459 CGTCCCAAAATAAGTGTCTTGAGC 60.378 45.833 0.00 0.00 0.00 4.26
9066 10150 4.154195 CCGTCCCAAAATAAGTGTCTTGAG 59.846 45.833 0.00 0.00 0.00 3.02
9067 10151 4.069304 CCGTCCCAAAATAAGTGTCTTGA 58.931 43.478 0.00 0.00 0.00 3.02
9068 10152 4.069304 TCCGTCCCAAAATAAGTGTCTTG 58.931 43.478 0.00 0.00 0.00 3.02
9069 10153 4.360951 TCCGTCCCAAAATAAGTGTCTT 57.639 40.909 0.00 0.00 0.00 3.01
9070 10154 4.261801 CATCCGTCCCAAAATAAGTGTCT 58.738 43.478 0.00 0.00 0.00 3.41
9071 10155 3.377172 CCATCCGTCCCAAAATAAGTGTC 59.623 47.826 0.00 0.00 0.00 3.67
9072 10156 3.009695 TCCATCCGTCCCAAAATAAGTGT 59.990 43.478 0.00 0.00 0.00 3.55
9073 10157 3.616219 TCCATCCGTCCCAAAATAAGTG 58.384 45.455 0.00 0.00 0.00 3.16
9074 10158 3.265995 ACTCCATCCGTCCCAAAATAAGT 59.734 43.478 0.00 0.00 0.00 2.24
9075 10159 3.886123 ACTCCATCCGTCCCAAAATAAG 58.114 45.455 0.00 0.00 0.00 1.73
9076 10160 5.438698 TTACTCCATCCGTCCCAAAATAA 57.561 39.130 0.00 0.00 0.00 1.40
9077 10161 5.640158 ATTACTCCATCCGTCCCAAAATA 57.360 39.130 0.00 0.00 0.00 1.40
9078 10162 4.519906 ATTACTCCATCCGTCCCAAAAT 57.480 40.909 0.00 0.00 0.00 1.82
9079 10163 4.310022 AATTACTCCATCCGTCCCAAAA 57.690 40.909 0.00 0.00 0.00 2.44
9080 10164 4.310022 AAATTACTCCATCCGTCCCAAA 57.690 40.909 0.00 0.00 0.00 3.28
9081 10165 4.013728 CAAAATTACTCCATCCGTCCCAA 58.986 43.478 0.00 0.00 0.00 4.12
9082 10166 3.009695 ACAAAATTACTCCATCCGTCCCA 59.990 43.478 0.00 0.00 0.00 4.37
9083 10167 3.617284 ACAAAATTACTCCATCCGTCCC 58.383 45.455 0.00 0.00 0.00 4.46
9084 10168 6.317893 ACAATACAAAATTACTCCATCCGTCC 59.682 38.462 0.00 0.00 0.00 4.79
9085 10169 7.316544 ACAATACAAAATTACTCCATCCGTC 57.683 36.000 0.00 0.00 0.00 4.79
9086 10170 7.696992 AACAATACAAAATTACTCCATCCGT 57.303 32.000 0.00 0.00 0.00 4.69
9126 10210 6.414732 CGGCCTAATTATGATTCAGGGATAA 58.585 40.000 0.00 0.00 0.00 1.75
9148 10232 1.605202 CCTGCAACACATTTTTCCCGG 60.605 52.381 0.00 0.00 0.00 5.73
9153 10237 1.070601 GGAGGCCTGCAACACATTTTT 59.929 47.619 20.97 0.00 0.00 1.94
9190 10274 3.615496 ACATTTTAGCGTGTCCATACGAC 59.385 43.478 2.14 0.00 46.46 4.34
9193 10277 4.939509 ACACATTTTAGCGTGTCCATAC 57.060 40.909 0.00 0.00 42.61 2.39
9201 10285 2.034053 CCACCACAACACATTTTAGCGT 59.966 45.455 0.00 0.00 0.00 5.07
9202 10286 2.660490 CCACCACAACACATTTTAGCG 58.340 47.619 0.00 0.00 0.00 4.26
9203 10287 2.403259 GCCACCACAACACATTTTAGC 58.597 47.619 0.00 0.00 0.00 3.09
9204 10288 2.627699 AGGCCACCACAACACATTTTAG 59.372 45.455 5.01 0.00 0.00 1.85
9207 10291 1.039856 GAGGCCACCACAACACATTT 58.960 50.000 5.01 0.00 0.00 2.32
9210 10294 2.203139 CGAGGCCACCACAACACA 60.203 61.111 5.01 0.00 0.00 3.72
9211 10295 0.889186 ATTCGAGGCCACCACAACAC 60.889 55.000 5.01 0.00 0.00 3.32
9212 10296 0.888736 CATTCGAGGCCACCACAACA 60.889 55.000 5.01 0.00 0.00 3.33
9237 10616 1.344114 TGCAACCAATCTGCCTTTTCC 59.656 47.619 0.00 0.00 39.13 3.13
9239 10618 2.531522 GTGCAACCAATCTGCCTTTT 57.468 45.000 0.00 0.00 39.13 2.27
9305 10685 1.968493 TCCAACTACTGACTGACCCAC 59.032 52.381 0.00 0.00 0.00 4.61
9311 10692 4.950475 TCTCTACCATCCAACTACTGACTG 59.050 45.833 0.00 0.00 0.00 3.51
9312 10693 5.194473 TCTCTACCATCCAACTACTGACT 57.806 43.478 0.00 0.00 0.00 3.41
9333 10715 2.850060 CGTTGCACATCAGCATCATTTC 59.150 45.455 0.00 0.00 45.19 2.17
9334 10716 2.229543 ACGTTGCACATCAGCATCATTT 59.770 40.909 0.00 0.00 45.19 2.32
9354 10736 2.416547 ACACGTAGCATTCAATCAGCAC 59.583 45.455 0.00 0.00 0.00 4.40
9361 10743 7.223971 GGATACTGAAATACACGTAGCATTCAA 59.776 37.037 0.00 0.00 0.00 2.69
9372 10754 4.267928 GTGTGCTCGGATACTGAAATACAC 59.732 45.833 0.00 0.00 0.00 2.90
9374 10756 4.267928 GTGTGTGCTCGGATACTGAAATAC 59.732 45.833 0.00 0.00 0.00 1.89
9375 10757 4.081917 TGTGTGTGCTCGGATACTGAAATA 60.082 41.667 0.00 0.00 0.00 1.40
9376 10758 3.262420 GTGTGTGCTCGGATACTGAAAT 58.738 45.455 0.00 0.00 0.00 2.17
9378 10760 1.616374 TGTGTGTGCTCGGATACTGAA 59.384 47.619 0.00 0.00 0.00 3.02
9386 10768 3.357079 GGGCTTGTGTGTGCTCGG 61.357 66.667 0.00 0.00 0.00 4.63
9387 10769 2.591429 TGGGCTTGTGTGTGCTCG 60.591 61.111 0.00 0.00 31.17 5.03
9390 10772 1.174712 ATGTCTGGGCTTGTGTGTGC 61.175 55.000 0.00 0.00 0.00 4.57
9395 10777 0.325933 TGGAGATGTCTGGGCTTGTG 59.674 55.000 0.00 0.00 0.00 3.33
9427 10809 5.407407 AGGAAAGTTCACGTCTGTATCAT 57.593 39.130 0.00 0.00 0.00 2.45
9434 10816 6.458478 CGATATCTGTAGGAAAGTTCACGTCT 60.458 42.308 0.34 0.00 0.00 4.18
9435 10817 5.681982 CGATATCTGTAGGAAAGTTCACGTC 59.318 44.000 0.34 0.00 0.00 4.34
9436 10818 5.579718 CGATATCTGTAGGAAAGTTCACGT 58.420 41.667 0.34 0.00 0.00 4.49
9437 10819 4.441415 GCGATATCTGTAGGAAAGTTCACG 59.559 45.833 0.34 0.00 0.00 4.35
9439 10821 4.404394 TGGCGATATCTGTAGGAAAGTTCA 59.596 41.667 0.34 0.00 0.00 3.18
9440 10822 4.945246 TGGCGATATCTGTAGGAAAGTTC 58.055 43.478 0.34 0.00 0.00 3.01
9441 10823 4.202264 CCTGGCGATATCTGTAGGAAAGTT 60.202 45.833 9.27 0.00 0.00 2.66
9442 10824 3.322254 CCTGGCGATATCTGTAGGAAAGT 59.678 47.826 9.27 0.00 0.00 2.66
9481 11290 8.397575 TGGTTGCTGTAAATTACTGAATTACA 57.602 30.769 13.13 0.00 34.01 2.41
9482 11291 7.968405 CCTGGTTGCTGTAAATTACTGAATTAC 59.032 37.037 13.13 0.45 34.01 1.89
9483 11292 7.122055 CCCTGGTTGCTGTAAATTACTGAATTA 59.878 37.037 13.13 0.00 34.01 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.