Multiple sequence alignment - TraesCS2B01G522800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G522800 | chr2B | 100.000 | 3757 | 0 | 0 | 1 | 3757 | 717471490 | 717475246 | 0.000000e+00 | 6938.0 |
1 | TraesCS2B01G522800 | chr2B | 95.930 | 172 | 7 | 0 | 124 | 295 | 793708293 | 793708464 | 2.860000e-71 | 279.0 |
2 | TraesCS2B01G522800 | chr2D | 90.638 | 1976 | 93 | 50 | 718 | 2650 | 591953007 | 591954933 | 0.000000e+00 | 2540.0 |
3 | TraesCS2B01G522800 | chr2D | 93.541 | 929 | 39 | 11 | 2837 | 3757 | 591955594 | 591956509 | 0.000000e+00 | 1363.0 |
4 | TraesCS2B01G522800 | chr2D | 89.474 | 133 | 7 | 3 | 3 | 128 | 591952423 | 591952555 | 1.080000e-35 | 161.0 |
5 | TraesCS2B01G522800 | chr2A | 89.269 | 1752 | 95 | 40 | 969 | 2678 | 726417715 | 726419415 | 0.000000e+00 | 2108.0 |
6 | TraesCS2B01G522800 | chr2A | 91.549 | 923 | 56 | 12 | 2837 | 3757 | 726420991 | 726421893 | 0.000000e+00 | 1253.0 |
7 | TraesCS2B01G522800 | chr2A | 84.699 | 366 | 31 | 9 | 368 | 726 | 726416462 | 726416809 | 3.590000e-90 | 342.0 |
8 | TraesCS2B01G522800 | chr2A | 90.338 | 207 | 19 | 1 | 742 | 948 | 726417192 | 726417397 | 1.720000e-68 | 270.0 |
9 | TraesCS2B01G522800 | chr2A | 85.455 | 110 | 9 | 5 | 2670 | 2774 | 726419731 | 726419838 | 1.430000e-19 | 108.0 |
10 | TraesCS2B01G522800 | chr2A | 97.561 | 41 | 1 | 0 | 300 | 340 | 726416437 | 726416477 | 1.870000e-08 | 71.3 |
11 | TraesCS2B01G522800 | chr5B | 84.968 | 632 | 53 | 19 | 3130 | 3742 | 709331873 | 709332481 | 1.490000e-168 | 603.0 |
12 | TraesCS2B01G522800 | chr5B | 96.970 | 165 | 5 | 0 | 125 | 289 | 338489035 | 338489199 | 1.030000e-70 | 278.0 |
13 | TraesCS2B01G522800 | chr5B | 96.386 | 166 | 6 | 0 | 125 | 290 | 145828344 | 145828179 | 1.330000e-69 | 274.0 |
14 | TraesCS2B01G522800 | chr4A | 85.868 | 559 | 45 | 18 | 3130 | 3672 | 605733498 | 605732958 | 7.040000e-157 | 564.0 |
15 | TraesCS2B01G522800 | chr4A | 75.357 | 280 | 38 | 22 | 2460 | 2715 | 453609493 | 453609221 | 5.130000e-19 | 106.0 |
16 | TraesCS2B01G522800 | chr5D | 85.689 | 559 | 41 | 14 | 3134 | 3672 | 557214112 | 557213573 | 1.520000e-153 | 553.0 |
17 | TraesCS2B01G522800 | chr5D | 89.831 | 59 | 5 | 1 | 2651 | 2708 | 403937270 | 403937212 | 1.450000e-09 | 75.0 |
18 | TraesCS2B01G522800 | chr6D | 98.160 | 163 | 3 | 0 | 125 | 287 | 81746930 | 81746768 | 6.140000e-73 | 285.0 |
19 | TraesCS2B01G522800 | chr3D | 97.041 | 169 | 4 | 1 | 119 | 287 | 596058970 | 596059137 | 2.210000e-72 | 283.0 |
20 | TraesCS2B01G522800 | chr6B | 97.006 | 167 | 5 | 0 | 125 | 291 | 229680946 | 229680780 | 7.950000e-72 | 281.0 |
21 | TraesCS2B01G522800 | chr3A | 96.429 | 168 | 6 | 0 | 125 | 292 | 731100877 | 731100710 | 1.030000e-70 | 278.0 |
22 | TraesCS2B01G522800 | chr1B | 94.857 | 175 | 7 | 1 | 124 | 298 | 120646733 | 120646561 | 4.780000e-69 | 272.0 |
23 | TraesCS2B01G522800 | chr1B | 89.865 | 148 | 8 | 3 | 3 | 144 | 628795880 | 628796026 | 2.300000e-42 | 183.0 |
24 | TraesCS2B01G522800 | chr1A | 94.798 | 173 | 9 | 0 | 125 | 297 | 492657471 | 492657299 | 1.720000e-68 | 270.0 |
25 | TraesCS2B01G522800 | chr4D | 78.283 | 198 | 21 | 18 | 2532 | 2708 | 121437261 | 121437065 | 1.430000e-19 | 108.0 |
26 | TraesCS2B01G522800 | chr4B | 77.143 | 210 | 26 | 18 | 2533 | 2721 | 184238087 | 184237879 | 6.640000e-18 | 102.0 |
27 | TraesCS2B01G522800 | chr7D | 83.000 | 100 | 13 | 3 | 2613 | 2708 | 128787063 | 128787162 | 1.860000e-13 | 87.9 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G522800 | chr2B | 717471490 | 717475246 | 3756 | False | 6938.000000 | 6938 | 100.000000 | 1 | 3757 | 1 | chr2B.!!$F1 | 3756 |
1 | TraesCS2B01G522800 | chr2D | 591952423 | 591956509 | 4086 | False | 1354.666667 | 2540 | 91.217667 | 3 | 3757 | 3 | chr2D.!!$F1 | 3754 |
2 | TraesCS2B01G522800 | chr2A | 726416437 | 726421893 | 5456 | False | 692.050000 | 2108 | 89.811833 | 300 | 3757 | 6 | chr2A.!!$F1 | 3457 |
3 | TraesCS2B01G522800 | chr5B | 709331873 | 709332481 | 608 | False | 603.000000 | 603 | 84.968000 | 3130 | 3742 | 1 | chr5B.!!$F2 | 612 |
4 | TraesCS2B01G522800 | chr4A | 605732958 | 605733498 | 540 | True | 564.000000 | 564 | 85.868000 | 3130 | 3672 | 1 | chr4A.!!$R2 | 542 |
5 | TraesCS2B01G522800 | chr5D | 557213573 | 557214112 | 539 | True | 553.000000 | 553 | 85.689000 | 3134 | 3672 | 1 | chr5D.!!$R2 | 538 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
32 | 33 | 0.260230 | TGGTTTGCAGGGTGGAAAGA | 59.740 | 50.0 | 0.00 | 0.00 | 38.34 | 2.52 | F |
242 | 250 | 0.388294 | GCTCCGTATGTAGTCCACCC | 59.612 | 60.0 | 0.00 | 0.00 | 0.00 | 4.61 | F |
458 | 473 | 0.537188 | ATTGTACGCCTGGAGTGGAG | 59.463 | 55.0 | 13.68 | 0.00 | 0.00 | 3.86 | F |
1195 | 1902 | 0.591741 | GGATCATGTCGACGTCGGAC | 60.592 | 60.0 | 35.05 | 28.73 | 40.29 | 4.79 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1015 | 1718 | 0.468226 | TCTCAAGGCTTTGTGTCCGT | 59.532 | 50.0 | 8.56 | 0.0 | 35.73 | 4.69 | R |
1614 | 2324 | 0.526524 | GTCGCTCCTCATGAAGTCCG | 60.527 | 60.0 | 0.00 | 0.0 | 0.00 | 4.79 | R |
2368 | 3078 | 0.388649 | GCACGAACGTGGACTGATCT | 60.389 | 55.0 | 24.71 | 0.0 | 45.49 | 2.75 | R |
3110 | 5468 | 0.249405 | AGGCCGCAATTTTGTGTGTG | 60.249 | 50.0 | 0.00 | 0.0 | 36.98 | 3.82 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
25 | 26 | 2.173519 | CATTCTGATGGTTTGCAGGGT | 58.826 | 47.619 | 0.00 | 0.00 | 33.05 | 4.34 |
32 | 33 | 0.260230 | TGGTTTGCAGGGTGGAAAGA | 59.740 | 50.000 | 0.00 | 0.00 | 38.34 | 2.52 |
38 | 39 | 2.790433 | TGCAGGGTGGAAAGATTGTAC | 58.210 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
39 | 40 | 2.107378 | TGCAGGGTGGAAAGATTGTACA | 59.893 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
40 | 41 | 3.245229 | TGCAGGGTGGAAAGATTGTACAT | 60.245 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
42 | 43 | 4.588899 | CAGGGTGGAAAGATTGTACATCA | 58.411 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
43 | 44 | 4.396166 | CAGGGTGGAAAGATTGTACATCAC | 59.604 | 45.833 | 0.00 | 0.00 | 0.00 | 3.06 |
45 | 46 | 4.396166 | GGGTGGAAAGATTGTACATCACAG | 59.604 | 45.833 | 0.00 | 0.00 | 38.72 | 3.66 |
101 | 109 | 3.558931 | TGTTCAAACAGAAGGCAGAGA | 57.441 | 42.857 | 0.00 | 0.00 | 36.78 | 3.10 |
113 | 121 | 2.813907 | AGGCAGAGAAGCTCTTGAGTA | 58.186 | 47.619 | 0.00 | 0.00 | 38.99 | 2.59 |
133 | 141 | 2.468915 | AGCTTACAAGGTACTCCCTCC | 58.531 | 52.381 | 0.00 | 0.00 | 45.47 | 4.30 |
134 | 142 | 2.185387 | GCTTACAAGGTACTCCCTCCA | 58.815 | 52.381 | 0.00 | 0.00 | 45.47 | 3.86 |
135 | 143 | 2.772515 | GCTTACAAGGTACTCCCTCCAT | 59.227 | 50.000 | 0.00 | 0.00 | 45.47 | 3.41 |
136 | 144 | 3.200165 | GCTTACAAGGTACTCCCTCCATT | 59.800 | 47.826 | 0.00 | 0.00 | 45.47 | 3.16 |
137 | 145 | 4.683671 | GCTTACAAGGTACTCCCTCCATTC | 60.684 | 50.000 | 0.00 | 0.00 | 45.47 | 2.67 |
138 | 146 | 2.197465 | ACAAGGTACTCCCTCCATTCC | 58.803 | 52.381 | 0.00 | 0.00 | 45.47 | 3.01 |
139 | 147 | 2.225908 | ACAAGGTACTCCCTCCATTCCT | 60.226 | 50.000 | 0.00 | 0.00 | 45.47 | 3.36 |
140 | 148 | 3.013648 | ACAAGGTACTCCCTCCATTCCTA | 59.986 | 47.826 | 0.00 | 0.00 | 45.47 | 2.94 |
141 | 149 | 4.037927 | CAAGGTACTCCCTCCATTCCTAA | 58.962 | 47.826 | 0.00 | 0.00 | 45.47 | 2.69 |
142 | 150 | 4.363546 | AGGTACTCCCTCCATTCCTAAA | 57.636 | 45.455 | 0.00 | 0.00 | 40.71 | 1.85 |
143 | 151 | 4.909284 | AGGTACTCCCTCCATTCCTAAAT | 58.091 | 43.478 | 0.00 | 0.00 | 40.71 | 1.40 |
144 | 152 | 6.051946 | AGGTACTCCCTCCATTCCTAAATA | 57.948 | 41.667 | 0.00 | 0.00 | 40.71 | 1.40 |
145 | 153 | 6.644882 | AGGTACTCCCTCCATTCCTAAATAT | 58.355 | 40.000 | 0.00 | 0.00 | 40.71 | 1.28 |
146 | 154 | 7.786968 | AGGTACTCCCTCCATTCCTAAATATA | 58.213 | 38.462 | 0.00 | 0.00 | 40.71 | 0.86 |
148 | 156 | 8.541234 | GGTACTCCCTCCATTCCTAAATATAAG | 58.459 | 40.741 | 0.00 | 0.00 | 0.00 | 1.73 |
149 | 157 | 9.102453 | GTACTCCCTCCATTCCTAAATATAAGT | 57.898 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
150 | 158 | 8.208575 | ACTCCCTCCATTCCTAAATATAAGTC | 57.791 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
151 | 159 | 8.019652 | ACTCCCTCCATTCCTAAATATAAGTCT | 58.980 | 37.037 | 0.00 | 0.00 | 0.00 | 3.24 |
153 | 161 | 9.237706 | TCCCTCCATTCCTAAATATAAGTCTTT | 57.762 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
154 | 162 | 9.289782 | CCCTCCATTCCTAAATATAAGTCTTTG | 57.710 | 37.037 | 0.00 | 0.00 | 0.00 | 2.77 |
155 | 163 | 9.853177 | CCTCCATTCCTAAATATAAGTCTTTGT | 57.147 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
171 | 179 | 7.962995 | AGTCTTTGTAGAGATTCCACTATGA | 57.037 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
172 | 180 | 8.367660 | AGTCTTTGTAGAGATTCCACTATGAA | 57.632 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
173 | 181 | 8.254508 | AGTCTTTGTAGAGATTCCACTATGAAC | 58.745 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
174 | 182 | 8.254508 | GTCTTTGTAGAGATTCCACTATGAACT | 58.745 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
175 | 183 | 9.475620 | TCTTTGTAGAGATTCCACTATGAACTA | 57.524 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
177 | 185 | 8.589701 | TTGTAGAGATTCCACTATGAACTACA | 57.410 | 34.615 | 0.00 | 0.00 | 33.29 | 2.74 |
178 | 186 | 8.768501 | TGTAGAGATTCCACTATGAACTACAT | 57.231 | 34.615 | 0.00 | 0.00 | 42.39 | 2.29 |
179 | 187 | 9.862149 | TGTAGAGATTCCACTATGAACTACATA | 57.138 | 33.333 | 0.00 | 0.00 | 40.07 | 2.29 |
181 | 189 | 7.877003 | AGAGATTCCACTATGAACTACATACG | 58.123 | 38.462 | 0.00 | 0.00 | 40.07 | 3.06 |
182 | 190 | 6.982852 | AGATTCCACTATGAACTACATACGG | 58.017 | 40.000 | 0.00 | 0.00 | 40.07 | 4.02 |
183 | 191 | 6.776116 | AGATTCCACTATGAACTACATACGGA | 59.224 | 38.462 | 0.00 | 0.00 | 40.07 | 4.69 |
184 | 192 | 6.971726 | TTCCACTATGAACTACATACGGAT | 57.028 | 37.500 | 0.00 | 0.00 | 37.58 | 4.18 |
185 | 193 | 6.327279 | TCCACTATGAACTACATACGGATG | 57.673 | 41.667 | 5.94 | 5.94 | 40.07 | 3.51 |
187 | 195 | 6.999871 | TCCACTATGAACTACATACGGATGTA | 59.000 | 38.462 | 19.32 | 19.32 | 44.77 | 2.29 |
188 | 196 | 7.668469 | TCCACTATGAACTACATACGGATGTAT | 59.332 | 37.037 | 20.64 | 7.28 | 45.42 | 2.29 |
189 | 197 | 8.953313 | CCACTATGAACTACATACGGATGTATA | 58.047 | 37.037 | 20.64 | 10.04 | 45.42 | 1.47 |
196 | 204 | 9.666626 | GAACTACATACGGATGTATATAGATGC | 57.333 | 37.037 | 20.64 | 0.00 | 45.42 | 3.91 |
197 | 205 | 8.747538 | ACTACATACGGATGTATATAGATGCA | 57.252 | 34.615 | 20.64 | 0.00 | 45.42 | 3.96 |
198 | 206 | 9.355916 | ACTACATACGGATGTATATAGATGCAT | 57.644 | 33.333 | 20.64 | 0.00 | 45.42 | 3.96 |
201 | 209 | 9.890629 | ACATACGGATGTATATAGATGCATTTT | 57.109 | 29.630 | 12.79 | 0.00 | 44.77 | 1.82 |
205 | 213 | 9.944376 | ACGGATGTATATAGATGCATTTTAAGT | 57.056 | 29.630 | 11.19 | 0.00 | 38.38 | 2.24 |
214 | 222 | 6.839124 | AGATGCATTTTAAGTGTGGATTCA | 57.161 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
215 | 223 | 7.414222 | AGATGCATTTTAAGTGTGGATTCAT | 57.586 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
216 | 224 | 7.844009 | AGATGCATTTTAAGTGTGGATTCATT | 58.156 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
217 | 225 | 7.977853 | AGATGCATTTTAAGTGTGGATTCATTC | 59.022 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
218 | 226 | 6.990798 | TGCATTTTAAGTGTGGATTCATTCA | 58.009 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
219 | 227 | 7.613585 | TGCATTTTAAGTGTGGATTCATTCAT | 58.386 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
220 | 228 | 8.095792 | TGCATTTTAAGTGTGGATTCATTCATT | 58.904 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
221 | 229 | 8.938906 | GCATTTTAAGTGTGGATTCATTCATTT | 58.061 | 29.630 | 0.00 | 0.00 | 0.00 | 2.32 |
224 | 232 | 7.887996 | TTAAGTGTGGATTCATTCATTTTGC | 57.112 | 32.000 | 0.00 | 0.00 | 0.00 | 3.68 |
225 | 233 | 5.733620 | AGTGTGGATTCATTCATTTTGCT | 57.266 | 34.783 | 0.00 | 0.00 | 0.00 | 3.91 |
226 | 234 | 5.717119 | AGTGTGGATTCATTCATTTTGCTC | 58.283 | 37.500 | 0.00 | 0.00 | 0.00 | 4.26 |
227 | 235 | 4.866486 | GTGTGGATTCATTCATTTTGCTCC | 59.134 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
228 | 236 | 4.107622 | GTGGATTCATTCATTTTGCTCCG | 58.892 | 43.478 | 0.00 | 0.00 | 0.00 | 4.63 |
229 | 237 | 3.763360 | TGGATTCATTCATTTTGCTCCGT | 59.237 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
230 | 238 | 4.946772 | TGGATTCATTCATTTTGCTCCGTA | 59.053 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
231 | 239 | 5.593909 | TGGATTCATTCATTTTGCTCCGTAT | 59.406 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
232 | 240 | 5.916883 | GGATTCATTCATTTTGCTCCGTATG | 59.083 | 40.000 | 0.00 | 0.00 | 0.00 | 2.39 |
233 | 241 | 5.895636 | TTCATTCATTTTGCTCCGTATGT | 57.104 | 34.783 | 0.00 | 0.00 | 0.00 | 2.29 |
234 | 242 | 6.993786 | TTCATTCATTTTGCTCCGTATGTA | 57.006 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
235 | 243 | 6.603237 | TCATTCATTTTGCTCCGTATGTAG | 57.397 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
236 | 244 | 6.112734 | TCATTCATTTTGCTCCGTATGTAGT | 58.887 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
237 | 245 | 6.257849 | TCATTCATTTTGCTCCGTATGTAGTC | 59.742 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
238 | 246 | 4.439057 | TCATTTTGCTCCGTATGTAGTCC | 58.561 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
239 | 247 | 3.965379 | TTTTGCTCCGTATGTAGTCCA | 57.035 | 42.857 | 0.00 | 0.00 | 0.00 | 4.02 |
240 | 248 | 2.953466 | TTGCTCCGTATGTAGTCCAC | 57.047 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
241 | 249 | 1.108776 | TGCTCCGTATGTAGTCCACC | 58.891 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
242 | 250 | 0.388294 | GCTCCGTATGTAGTCCACCC | 59.612 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
243 | 251 | 1.771565 | CTCCGTATGTAGTCCACCCA | 58.228 | 55.000 | 0.00 | 0.00 | 0.00 | 4.51 |
244 | 252 | 1.681793 | CTCCGTATGTAGTCCACCCAG | 59.318 | 57.143 | 0.00 | 0.00 | 0.00 | 4.45 |
245 | 253 | 1.006281 | TCCGTATGTAGTCCACCCAGT | 59.994 | 52.381 | 0.00 | 0.00 | 0.00 | 4.00 |
246 | 254 | 1.136305 | CCGTATGTAGTCCACCCAGTG | 59.864 | 57.143 | 0.00 | 0.00 | 0.00 | 3.66 |
247 | 255 | 2.097036 | CGTATGTAGTCCACCCAGTGA | 58.903 | 52.381 | 0.00 | 0.00 | 35.23 | 3.41 |
248 | 256 | 2.494471 | CGTATGTAGTCCACCCAGTGAA | 59.506 | 50.000 | 0.00 | 0.00 | 35.23 | 3.18 |
249 | 257 | 3.056393 | CGTATGTAGTCCACCCAGTGAAA | 60.056 | 47.826 | 0.00 | 0.00 | 35.23 | 2.69 |
250 | 258 | 4.382685 | CGTATGTAGTCCACCCAGTGAAAT | 60.383 | 45.833 | 0.00 | 0.00 | 35.23 | 2.17 |
251 | 259 | 3.695830 | TGTAGTCCACCCAGTGAAATC | 57.304 | 47.619 | 0.00 | 0.00 | 35.23 | 2.17 |
252 | 260 | 3.248024 | TGTAGTCCACCCAGTGAAATCT | 58.752 | 45.455 | 0.00 | 0.00 | 35.23 | 2.40 |
253 | 261 | 3.260884 | TGTAGTCCACCCAGTGAAATCTC | 59.739 | 47.826 | 0.00 | 0.00 | 35.23 | 2.75 |
254 | 262 | 2.625639 | AGTCCACCCAGTGAAATCTCT | 58.374 | 47.619 | 0.00 | 0.00 | 35.23 | 3.10 |
255 | 263 | 3.791320 | AGTCCACCCAGTGAAATCTCTA | 58.209 | 45.455 | 0.00 | 0.00 | 35.23 | 2.43 |
256 | 264 | 3.515901 | AGTCCACCCAGTGAAATCTCTAC | 59.484 | 47.826 | 0.00 | 0.00 | 35.23 | 2.59 |
257 | 265 | 3.260884 | GTCCACCCAGTGAAATCTCTACA | 59.739 | 47.826 | 0.00 | 0.00 | 35.23 | 2.74 |
258 | 266 | 3.907474 | TCCACCCAGTGAAATCTCTACAA | 59.093 | 43.478 | 0.00 | 0.00 | 35.23 | 2.41 |
259 | 267 | 4.349636 | TCCACCCAGTGAAATCTCTACAAA | 59.650 | 41.667 | 0.00 | 0.00 | 35.23 | 2.83 |
260 | 268 | 4.697352 | CCACCCAGTGAAATCTCTACAAAG | 59.303 | 45.833 | 0.00 | 0.00 | 35.23 | 2.77 |
261 | 269 | 5.513094 | CCACCCAGTGAAATCTCTACAAAGA | 60.513 | 44.000 | 0.00 | 0.00 | 35.23 | 2.52 |
262 | 270 | 5.409826 | CACCCAGTGAAATCTCTACAAAGAC | 59.590 | 44.000 | 0.00 | 0.00 | 35.23 | 3.01 |
263 | 271 | 5.308237 | ACCCAGTGAAATCTCTACAAAGACT | 59.692 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
264 | 272 | 6.183361 | ACCCAGTGAAATCTCTACAAAGACTT | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
265 | 273 | 7.016268 | ACCCAGTGAAATCTCTACAAAGACTTA | 59.984 | 37.037 | 0.00 | 0.00 | 0.00 | 2.24 |
266 | 274 | 7.332182 | CCCAGTGAAATCTCTACAAAGACTTAC | 59.668 | 40.741 | 0.00 | 0.00 | 0.00 | 2.34 |
267 | 275 | 7.872993 | CCAGTGAAATCTCTACAAAGACTTACA | 59.127 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
268 | 276 | 9.429359 | CAGTGAAATCTCTACAAAGACTTACAT | 57.571 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
274 | 282 | 9.793259 | AATCTCTACAAAGACTTACATTTTGGA | 57.207 | 29.630 | 0.00 | 0.00 | 36.41 | 3.53 |
275 | 283 | 9.793259 | ATCTCTACAAAGACTTACATTTTGGAA | 57.207 | 29.630 | 0.00 | 0.00 | 36.41 | 3.53 |
276 | 284 | 9.052759 | TCTCTACAAAGACTTACATTTTGGAAC | 57.947 | 33.333 | 0.00 | 0.00 | 36.41 | 3.62 |
277 | 285 | 7.857569 | TCTACAAAGACTTACATTTTGGAACG | 58.142 | 34.615 | 0.00 | 0.00 | 36.41 | 3.95 |
278 | 286 | 5.827666 | ACAAAGACTTACATTTTGGAACGG | 58.172 | 37.500 | 0.00 | 0.00 | 36.41 | 4.44 |
279 | 287 | 5.591067 | ACAAAGACTTACATTTTGGAACGGA | 59.409 | 36.000 | 0.00 | 0.00 | 36.41 | 4.69 |
280 | 288 | 5.941948 | AAGACTTACATTTTGGAACGGAG | 57.058 | 39.130 | 0.00 | 0.00 | 0.00 | 4.63 |
281 | 289 | 4.324267 | AGACTTACATTTTGGAACGGAGG | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
282 | 290 | 3.418047 | ACTTACATTTTGGAACGGAGGG | 58.582 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
283 | 291 | 3.073356 | ACTTACATTTTGGAACGGAGGGA | 59.927 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
284 | 292 | 2.200373 | ACATTTTGGAACGGAGGGAG | 57.800 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
285 | 293 | 1.423921 | ACATTTTGGAACGGAGGGAGT | 59.576 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
286 | 294 | 2.640826 | ACATTTTGGAACGGAGGGAGTA | 59.359 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
287 | 295 | 3.265995 | ACATTTTGGAACGGAGGGAGTAT | 59.734 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
288 | 296 | 4.472108 | ACATTTTGGAACGGAGGGAGTATA | 59.528 | 41.667 | 0.00 | 0.00 | 0.00 | 1.47 |
289 | 297 | 5.045432 | ACATTTTGGAACGGAGGGAGTATAA | 60.045 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
290 | 298 | 4.748277 | TTTGGAACGGAGGGAGTATAAG | 57.252 | 45.455 | 0.00 | 0.00 | 0.00 | 1.73 |
291 | 299 | 3.675348 | TGGAACGGAGGGAGTATAAGA | 57.325 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
292 | 300 | 3.563223 | TGGAACGGAGGGAGTATAAGAG | 58.437 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
293 | 301 | 3.053095 | TGGAACGGAGGGAGTATAAGAGT | 60.053 | 47.826 | 0.00 | 0.00 | 0.00 | 3.24 |
294 | 302 | 3.318557 | GGAACGGAGGGAGTATAAGAGTG | 59.681 | 52.174 | 0.00 | 0.00 | 0.00 | 3.51 |
295 | 303 | 3.666345 | ACGGAGGGAGTATAAGAGTGT | 57.334 | 47.619 | 0.00 | 0.00 | 0.00 | 3.55 |
296 | 304 | 3.978610 | ACGGAGGGAGTATAAGAGTGTT | 58.021 | 45.455 | 0.00 | 0.00 | 0.00 | 3.32 |
297 | 305 | 4.351127 | ACGGAGGGAGTATAAGAGTGTTT | 58.649 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
298 | 306 | 5.513233 | ACGGAGGGAGTATAAGAGTGTTTA | 58.487 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
334 | 349 | 7.453838 | GTGTGGTTCTAACACGAGAAATTATC | 58.546 | 38.462 | 0.00 | 0.00 | 41.64 | 1.75 |
345 | 360 | 9.495572 | AACACGAGAAATTATCTTTCTTCTTCT | 57.504 | 29.630 | 2.08 | 0.00 | 38.96 | 2.85 |
346 | 361 | 9.495572 | ACACGAGAAATTATCTTTCTTCTTCTT | 57.504 | 29.630 | 2.08 | 0.00 | 38.96 | 2.52 |
362 | 377 | 8.466086 | TCTTCTTCTTTCTTCTTTTTGTTTGC | 57.534 | 30.769 | 0.00 | 0.00 | 0.00 | 3.68 |
363 | 378 | 6.869421 | TCTTCTTTCTTCTTTTTGTTTGCG | 57.131 | 33.333 | 0.00 | 0.00 | 0.00 | 4.85 |
364 | 379 | 6.616947 | TCTTCTTTCTTCTTTTTGTTTGCGA | 58.383 | 32.000 | 0.00 | 0.00 | 0.00 | 5.10 |
365 | 380 | 7.087639 | TCTTCTTTCTTCTTTTTGTTTGCGAA | 58.912 | 30.769 | 0.00 | 0.00 | 0.00 | 4.70 |
366 | 381 | 7.596995 | TCTTCTTTCTTCTTTTTGTTTGCGAAA | 59.403 | 29.630 | 0.00 | 0.00 | 0.00 | 3.46 |
367 | 382 | 7.276953 | TCTTTCTTCTTTTTGTTTGCGAAAG | 57.723 | 32.000 | 0.00 | 0.00 | 38.13 | 2.62 |
368 | 383 | 7.087639 | TCTTTCTTCTTTTTGTTTGCGAAAGA | 58.912 | 30.769 | 0.00 | 0.00 | 41.32 | 2.52 |
369 | 384 | 6.869421 | TTCTTCTTTTTGTTTGCGAAAGAG | 57.131 | 33.333 | 0.00 | 0.00 | 39.67 | 2.85 |
370 | 385 | 6.189677 | TCTTCTTTTTGTTTGCGAAAGAGA | 57.810 | 33.333 | 0.00 | 0.00 | 39.67 | 3.10 |
371 | 386 | 6.616947 | TCTTCTTTTTGTTTGCGAAAGAGAA | 58.383 | 32.000 | 0.00 | 0.00 | 39.67 | 2.87 |
372 | 387 | 7.087639 | TCTTCTTTTTGTTTGCGAAAGAGAAA | 58.912 | 30.769 | 0.00 | 0.00 | 39.67 | 2.52 |
373 | 388 | 6.626199 | TCTTTTTGTTTGCGAAAGAGAAAC | 57.374 | 33.333 | 0.00 | 0.00 | 35.22 | 2.78 |
374 | 389 | 6.386654 | TCTTTTTGTTTGCGAAAGAGAAACT | 58.613 | 32.000 | 0.00 | 0.00 | 35.22 | 2.66 |
375 | 390 | 7.531716 | TCTTTTTGTTTGCGAAAGAGAAACTA | 58.468 | 30.769 | 0.00 | 0.00 | 35.22 | 2.24 |
376 | 391 | 8.188139 | TCTTTTTGTTTGCGAAAGAGAAACTAT | 58.812 | 29.630 | 0.00 | 0.00 | 35.22 | 2.12 |
377 | 392 | 7.908193 | TTTTGTTTGCGAAAGAGAAACTATC | 57.092 | 32.000 | 0.00 | 0.00 | 36.50 | 2.08 |
378 | 393 | 6.861065 | TTGTTTGCGAAAGAGAAACTATCT | 57.139 | 33.333 | 0.00 | 0.00 | 42.61 | 1.98 |
379 | 394 | 6.861065 | TGTTTGCGAAAGAGAAACTATCTT | 57.139 | 33.333 | 0.00 | 0.00 | 38.96 | 2.40 |
380 | 395 | 7.259290 | TGTTTGCGAAAGAGAAACTATCTTT | 57.741 | 32.000 | 0.79 | 0.79 | 46.89 | 2.52 |
414 | 429 | 2.093447 | GGGTGTGGATGAAGGTCTACAG | 60.093 | 54.545 | 0.00 | 0.00 | 39.76 | 2.74 |
442 | 457 | 3.152341 | ACTCTGGTTTTGCAGGAGATTG | 58.848 | 45.455 | 0.00 | 0.00 | 0.00 | 2.67 |
443 | 458 | 3.152341 | CTCTGGTTTTGCAGGAGATTGT | 58.848 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
444 | 459 | 4.202461 | ACTCTGGTTTTGCAGGAGATTGTA | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
445 | 460 | 4.072131 | TCTGGTTTTGCAGGAGATTGTAC | 58.928 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
446 | 461 | 2.811431 | TGGTTTTGCAGGAGATTGTACG | 59.189 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
447 | 462 | 2.414161 | GGTTTTGCAGGAGATTGTACGC | 60.414 | 50.000 | 0.00 | 0.00 | 0.00 | 4.42 |
448 | 463 | 1.448985 | TTTGCAGGAGATTGTACGCC | 58.551 | 50.000 | 0.00 | 0.00 | 0.00 | 5.68 |
449 | 464 | 0.613260 | TTGCAGGAGATTGTACGCCT | 59.387 | 50.000 | 0.00 | 0.00 | 40.49 | 5.52 |
452 | 467 | 3.300032 | AGGAGATTGTACGCCTGGA | 57.700 | 52.632 | 0.00 | 0.00 | 38.55 | 3.86 |
453 | 468 | 1.115467 | AGGAGATTGTACGCCTGGAG | 58.885 | 55.000 | 0.00 | 0.00 | 38.55 | 3.86 |
458 | 473 | 0.537188 | ATTGTACGCCTGGAGTGGAG | 59.463 | 55.000 | 13.68 | 0.00 | 0.00 | 3.86 |
459 | 474 | 0.830444 | TTGTACGCCTGGAGTGGAGT | 60.830 | 55.000 | 13.68 | 0.00 | 42.57 | 3.85 |
474 | 489 | 1.566298 | GGAGTCTTGGAGGCCATGGT | 61.566 | 60.000 | 14.67 | 0.00 | 31.53 | 3.55 |
475 | 490 | 1.204146 | GAGTCTTGGAGGCCATGGTA | 58.796 | 55.000 | 14.67 | 0.00 | 31.53 | 3.25 |
489 | 510 | 0.914644 | ATGGTATGGCACTGTGAGCT | 59.085 | 50.000 | 12.86 | 0.00 | 0.00 | 4.09 |
528 | 549 | 6.533730 | CAAAAGATATGGTAGATGGCCTGTA | 58.466 | 40.000 | 3.32 | 0.00 | 0.00 | 2.74 |
552 | 578 | 3.375299 | CGACTAGGCATTTTCCTTTGAGG | 59.625 | 47.826 | 0.00 | 0.00 | 37.66 | 3.86 |
570 | 596 | 4.346730 | TGAGGAAAAAGATGGTCATGCAT | 58.653 | 39.130 | 0.00 | 0.00 | 0.00 | 3.96 |
595 | 623 | 4.637276 | TGTGAGACACCGTTGTGAATAAT | 58.363 | 39.130 | 0.00 | 0.00 | 45.76 | 1.28 |
596 | 624 | 5.060506 | TGTGAGACACCGTTGTGAATAATT | 58.939 | 37.500 | 0.00 | 0.00 | 45.76 | 1.40 |
598 | 626 | 5.049680 | GTGAGACACCGTTGTGAATAATTGT | 60.050 | 40.000 | 0.00 | 0.00 | 45.76 | 2.71 |
635 | 663 | 7.642669 | TCTAGAATTTGCTTTGACTGAAACAG | 58.357 | 34.615 | 0.00 | 0.00 | 37.52 | 3.16 |
655 | 683 | 5.385198 | ACAGAACACAATCCCAGTTTACAT | 58.615 | 37.500 | 0.00 | 0.00 | 0.00 | 2.29 |
706 | 734 | 5.181690 | TCAACCTCTTTGGATTTTTCACG | 57.818 | 39.130 | 0.00 | 0.00 | 39.71 | 4.35 |
713 | 741 | 4.808364 | TCTTTGGATTTTTCACGGCAAAAG | 59.192 | 37.500 | 0.00 | 0.00 | 0.00 | 2.27 |
842 | 1241 | 5.105187 | TCCATGATCAGTTCGTCTCTTGATT | 60.105 | 40.000 | 0.09 | 0.00 | 0.00 | 2.57 |
854 | 1253 | 7.525688 | TCGTCTCTTGATTGACATGAAATAC | 57.474 | 36.000 | 0.00 | 0.00 | 33.39 | 1.89 |
860 | 1259 | 9.338291 | CTCTTGATTGACATGAAATACTTTGTG | 57.662 | 33.333 | 0.00 | 0.00 | 33.39 | 3.33 |
905 | 1304 | 7.415653 | CCATCAAAGTAGAAGGGTAAAAGATGC | 60.416 | 40.741 | 0.00 | 0.00 | 0.00 | 3.91 |
909 | 1308 | 6.869206 | AGTAGAAGGGTAAAAGATGCTGTA | 57.131 | 37.500 | 0.00 | 0.00 | 0.00 | 2.74 |
955 | 1354 | 9.086336 | ACAACAAGTTTACAACATTGATTCTTG | 57.914 | 29.630 | 0.00 | 9.35 | 35.20 | 3.02 |
961 | 1360 | 8.090214 | AGTTTACAACATTGATTCTTGATTGGG | 58.910 | 33.333 | 0.00 | 0.00 | 0.00 | 4.12 |
964 | 1363 | 5.776716 | ACAACATTGATTCTTGATTGGGACT | 59.223 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
965 | 1364 | 6.947733 | ACAACATTGATTCTTGATTGGGACTA | 59.052 | 34.615 | 0.00 | 0.00 | 0.00 | 2.59 |
966 | 1365 | 7.616935 | ACAACATTGATTCTTGATTGGGACTAT | 59.383 | 33.333 | 0.00 | 0.00 | 0.00 | 2.12 |
967 | 1366 | 9.123902 | CAACATTGATTCTTGATTGGGACTATA | 57.876 | 33.333 | 0.00 | 0.00 | 0.00 | 1.31 |
981 | 1677 | 8.686739 | ATTGGGACTATATAGCACTCCTATTT | 57.313 | 34.615 | 9.78 | 0.00 | 37.84 | 1.40 |
1013 | 1716 | 2.427232 | TTGTCCAAGGAACGTACGAG | 57.573 | 50.000 | 24.41 | 4.12 | 0.00 | 4.18 |
1014 | 1717 | 0.599558 | TGTCCAAGGAACGTACGAGG | 59.400 | 55.000 | 24.41 | 12.84 | 0.00 | 4.63 |
1015 | 1718 | 0.883833 | GTCCAAGGAACGTACGAGGA | 59.116 | 55.000 | 24.41 | 14.83 | 0.00 | 3.71 |
1016 | 1719 | 0.883833 | TCCAAGGAACGTACGAGGAC | 59.116 | 55.000 | 24.41 | 8.98 | 0.00 | 3.85 |
1056 | 1759 | 7.542477 | TGAGAAAGAAGTCGATAAACATCTGTC | 59.458 | 37.037 | 0.00 | 0.00 | 33.39 | 3.51 |
1059 | 1762 | 7.588143 | AAGAAGTCGATAAACATCTGTCTTG | 57.412 | 36.000 | 0.00 | 0.00 | 28.35 | 3.02 |
1129 | 1836 | 2.476185 | GCACGCACGCAAATTCTAGATT | 60.476 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
1130 | 1837 | 3.242284 | GCACGCACGCAAATTCTAGATTA | 60.242 | 43.478 | 0.00 | 0.00 | 0.00 | 1.75 |
1131 | 1838 | 4.552767 | GCACGCACGCAAATTCTAGATTAT | 60.553 | 41.667 | 0.00 | 0.00 | 0.00 | 1.28 |
1195 | 1902 | 0.591741 | GGATCATGTCGACGTCGGAC | 60.592 | 60.000 | 35.05 | 28.73 | 40.29 | 4.79 |
1292 | 1999 | 4.410400 | GCTCCCACCTGTTCCGGG | 62.410 | 72.222 | 0.00 | 0.00 | 41.76 | 5.73 |
1325 | 2032 | 4.681978 | AGGTCAAGGCGACGGTGC | 62.682 | 66.667 | 0.00 | 0.00 | 46.42 | 5.01 |
1408 | 2115 | 1.805945 | CTACCCGAACAGCTGCGTC | 60.806 | 63.158 | 15.27 | 10.84 | 0.00 | 5.19 |
1481 | 2188 | 1.374252 | CCCCACTTTCTCCGACGTG | 60.374 | 63.158 | 0.00 | 0.00 | 0.00 | 4.49 |
1483 | 2190 | 1.366366 | CCACTTTCTCCGACGTGGT | 59.634 | 57.895 | 0.00 | 0.00 | 41.46 | 4.16 |
1532 | 2242 | 1.421485 | GCGTCCATCAAGTTCAGCG | 59.579 | 57.895 | 0.00 | 0.00 | 0.00 | 5.18 |
1614 | 2324 | 4.436998 | CGACGACTGGGGCTGGAC | 62.437 | 72.222 | 0.00 | 0.00 | 0.00 | 4.02 |
1937 | 2647 | 3.743091 | GACCTCTCGCTCGCCTTCG | 62.743 | 68.421 | 0.00 | 0.00 | 0.00 | 3.79 |
2117 | 2827 | 3.788766 | CGGCGCACAGGTACAAGC | 61.789 | 66.667 | 10.83 | 0.00 | 0.00 | 4.01 |
2254 | 2964 | 3.853671 | CGTGCATGCAGTTTATTTCTTCC | 59.146 | 43.478 | 23.41 | 3.12 | 0.00 | 3.46 |
2405 | 3115 | 3.802685 | CGTGCCATTTACTACCTTCTAGC | 59.197 | 47.826 | 0.00 | 0.00 | 0.00 | 3.42 |
2413 | 3123 | 9.574516 | CCATTTACTACCTTCTAGCCATTTAAT | 57.425 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2417 | 3127 | 7.334844 | ACTACCTTCTAGCCATTTAATTTGC | 57.665 | 36.000 | 0.00 | 0.00 | 0.00 | 3.68 |
2419 | 3129 | 6.456795 | ACCTTCTAGCCATTTAATTTGCTC | 57.543 | 37.500 | 2.52 | 0.00 | 35.34 | 4.26 |
2420 | 3130 | 6.190587 | ACCTTCTAGCCATTTAATTTGCTCT | 58.809 | 36.000 | 2.52 | 0.00 | 35.34 | 4.09 |
2421 | 3131 | 6.665248 | ACCTTCTAGCCATTTAATTTGCTCTT | 59.335 | 34.615 | 2.52 | 0.00 | 35.34 | 2.85 |
2488 | 3207 | 2.034558 | GCTAATACCCGTGCATTGCAAT | 59.965 | 45.455 | 13.94 | 5.99 | 41.47 | 3.56 |
2492 | 3211 | 2.509786 | CCGTGCATTGCAATGGGC | 60.510 | 61.111 | 34.23 | 24.04 | 41.47 | 5.36 |
2509 | 3228 | 6.090763 | GCAATGGGCACAACTTTATTTTAGTC | 59.909 | 38.462 | 0.00 | 0.00 | 43.97 | 2.59 |
2511 | 3230 | 4.163552 | GGGCACAACTTTATTTTAGTCGC | 58.836 | 43.478 | 0.00 | 0.00 | 0.00 | 5.19 |
2524 | 3243 | 8.997621 | TTATTTTAGTCGCTCAGTGTAGAATT | 57.002 | 30.769 | 0.00 | 0.00 | 0.00 | 2.17 |
2525 | 3244 | 7.907214 | ATTTTAGTCGCTCAGTGTAGAATTT | 57.093 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2526 | 3245 | 7.724305 | TTTTAGTCGCTCAGTGTAGAATTTT | 57.276 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2527 | 3246 | 7.724305 | TTTAGTCGCTCAGTGTAGAATTTTT | 57.276 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
2558 | 3281 | 6.566079 | TGACTGGGTTGAGATTGAGATATT | 57.434 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
2570 | 3293 | 6.060788 | AGATTGAGATATTTTGTCAGGAGGC | 58.939 | 40.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2573 | 3296 | 5.188434 | TGAGATATTTTGTCAGGAGGCAAG | 58.812 | 41.667 | 0.00 | 0.00 | 0.00 | 4.01 |
2591 | 3323 | 7.201741 | GGAGGCAAGAGGTAAAAAGATATGTTC | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 3.18 |
2610 | 3356 | 7.823745 | ATGTTCCTGAGATTTGTGTACTTTT | 57.176 | 32.000 | 0.00 | 0.00 | 0.00 | 2.27 |
2611 | 3357 | 8.918202 | ATGTTCCTGAGATTTGTGTACTTTTA | 57.082 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
2638 | 3384 | 7.935338 | AGTGAGTTGATTTTGTATTTTGCTG | 57.065 | 32.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2639 | 3385 | 6.421801 | AGTGAGTTGATTTTGTATTTTGCTGC | 59.578 | 34.615 | 0.00 | 0.00 | 0.00 | 5.25 |
2657 | 3407 | 3.703420 | CTGCAGATTTCTTGCTATTGGC | 58.297 | 45.455 | 8.42 | 0.00 | 42.22 | 4.52 |
2718 | 3801 | 0.324738 | TTCTCCAGAGCCGAGGTGAT | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 3.06 |
2722 | 3805 | 1.599047 | CAGAGCCGAGGTGATGGTT | 59.401 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
2723 | 3806 | 0.824109 | CAGAGCCGAGGTGATGGTTA | 59.176 | 55.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2738 | 3826 | 7.561356 | AGGTGATGGTTAGAAAAATAGGGATTG | 59.439 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
2743 | 3831 | 6.661805 | TGGTTAGAAAAATAGGGATTGTCACC | 59.338 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
2744 | 3832 | 6.890268 | GGTTAGAAAAATAGGGATTGTCACCT | 59.110 | 38.462 | 0.00 | 0.00 | 40.89 | 4.00 |
2746 | 3834 | 5.264395 | AGAAAAATAGGGATTGTCACCTGG | 58.736 | 41.667 | 0.00 | 0.00 | 37.72 | 4.45 |
2749 | 3837 | 4.675063 | AATAGGGATTGTCACCTGGTTT | 57.325 | 40.909 | 0.00 | 0.00 | 37.72 | 3.27 |
2792 | 5032 | 5.158141 | TGAAGGAGCATATATGGAAGAGGT | 58.842 | 41.667 | 14.51 | 0.00 | 0.00 | 3.85 |
2801 | 5041 | 6.016777 | GCATATATGGAAGAGGTGGAAACAAG | 60.017 | 42.308 | 14.51 | 0.00 | 46.06 | 3.16 |
2813 | 5053 | 5.659079 | AGGTGGAAACAAGACCAACAAATTA | 59.341 | 36.000 | 0.00 | 0.00 | 45.28 | 1.40 |
2815 | 5055 | 6.334202 | GTGGAAACAAGACCAACAAATTACA | 58.666 | 36.000 | 0.00 | 0.00 | 46.06 | 2.41 |
2816 | 5056 | 6.814146 | GTGGAAACAAGACCAACAAATTACAA | 59.186 | 34.615 | 0.00 | 0.00 | 46.06 | 2.41 |
2818 | 5058 | 7.493971 | TGGAAACAAGACCAACAAATTACAATG | 59.506 | 33.333 | 0.00 | 0.00 | 37.44 | 2.82 |
2820 | 5060 | 8.419076 | AAACAAGACCAACAAATTACAATGTC | 57.581 | 30.769 | 0.00 | 0.00 | 0.00 | 3.06 |
2821 | 5061 | 6.205784 | ACAAGACCAACAAATTACAATGTCG | 58.794 | 36.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2823 | 5063 | 5.757886 | AGACCAACAAATTACAATGTCGTG | 58.242 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
2824 | 5064 | 5.298276 | AGACCAACAAATTACAATGTCGTGT | 59.702 | 36.000 | 0.00 | 0.00 | 35.43 | 4.49 |
2827 | 5067 | 7.481642 | ACCAACAAATTACAATGTCGTGTTAA | 58.518 | 30.769 | 0.00 | 0.00 | 32.75 | 2.01 |
2829 | 5069 | 8.808529 | CCAACAAATTACAATGTCGTGTTAAAA | 58.191 | 29.630 | 0.00 | 0.00 | 32.75 | 1.52 |
3060 | 5418 | 2.629137 | TCAACAAAAGCACATGCATCCT | 59.371 | 40.909 | 6.64 | 0.00 | 45.16 | 3.24 |
3075 | 5433 | 4.277476 | TGCATCCTAAATTTGGAACCGAT | 58.723 | 39.130 | 2.65 | 0.00 | 37.13 | 4.18 |
3089 | 5447 | 7.938140 | TTGGAACCGATCAATTTCTTTAGAT | 57.062 | 32.000 | 0.00 | 0.00 | 0.00 | 1.98 |
3090 | 5448 | 9.456147 | TTTGGAACCGATCAATTTCTTTAGATA | 57.544 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
3110 | 5468 | 7.964604 | AGATATAATTAAACCGCCTTCTGAC | 57.035 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3121 | 5480 | 2.033299 | CGCCTTCTGACACACACAAAAT | 59.967 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
3192 | 5558 | 3.672241 | GCCGATGAACAACAAATACCACC | 60.672 | 47.826 | 0.00 | 0.00 | 0.00 | 4.61 |
3221 | 5597 | 4.201970 | ACCAGTTCAACAATGTTACAACGG | 60.202 | 41.667 | 18.21 | 18.21 | 0.00 | 4.44 |
3335 | 5722 | 2.745884 | CATCAACGCGCCCTCCAA | 60.746 | 61.111 | 5.73 | 0.00 | 0.00 | 3.53 |
3475 | 5884 | 4.161377 | GCTACATCTCTCCCTTCTCTGTTT | 59.839 | 45.833 | 0.00 | 0.00 | 0.00 | 2.83 |
3676 | 6085 | 1.549203 | GGCTGATGTTTCATGGGTGT | 58.451 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3743 | 6152 | 2.027745 | TCATCTTCTCTTGGACAGTGGC | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 5.01 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 3.018856 | TGCAAACCATCAGAATGCTAGG | 58.981 | 45.455 | 0.00 | 0.00 | 37.86 | 3.02 |
1 | 2 | 3.066342 | CCTGCAAACCATCAGAATGCTAG | 59.934 | 47.826 | 0.00 | 0.00 | 37.86 | 3.42 |
25 | 26 | 8.298854 | CAAAATCTGTGATGTACAATCTTTCCA | 58.701 | 33.333 | 0.00 | 0.00 | 39.20 | 3.53 |
32 | 33 | 6.009589 | TGGACCAAAATCTGTGATGTACAAT | 58.990 | 36.000 | 0.00 | 0.00 | 39.20 | 2.71 |
38 | 39 | 6.028146 | TGAATTGGACCAAAATCTGTGATG | 57.972 | 37.500 | 11.82 | 0.00 | 0.00 | 3.07 |
39 | 40 | 5.186409 | CCTGAATTGGACCAAAATCTGTGAT | 59.814 | 40.000 | 11.82 | 0.00 | 0.00 | 3.06 |
40 | 41 | 4.523943 | CCTGAATTGGACCAAAATCTGTGA | 59.476 | 41.667 | 11.82 | 0.00 | 0.00 | 3.58 |
42 | 43 | 3.259123 | GCCTGAATTGGACCAAAATCTGT | 59.741 | 43.478 | 11.82 | 0.00 | 0.00 | 3.41 |
43 | 44 | 3.512724 | AGCCTGAATTGGACCAAAATCTG | 59.487 | 43.478 | 11.82 | 15.11 | 0.00 | 2.90 |
45 | 46 | 4.248058 | CAAGCCTGAATTGGACCAAAATC | 58.752 | 43.478 | 11.82 | 13.02 | 0.00 | 2.17 |
128 | 136 | 9.289782 | CAAAGACTTATATTTAGGAATGGAGGG | 57.710 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
129 | 137 | 9.853177 | ACAAAGACTTATATTTAGGAATGGAGG | 57.147 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
145 | 153 | 9.475620 | TCATAGTGGAATCTCTACAAAGACTTA | 57.524 | 33.333 | 0.00 | 0.00 | 29.47 | 2.24 |
146 | 154 | 8.367660 | TCATAGTGGAATCTCTACAAAGACTT | 57.632 | 34.615 | 0.00 | 0.00 | 29.47 | 3.01 |
148 | 156 | 8.254508 | AGTTCATAGTGGAATCTCTACAAAGAC | 58.745 | 37.037 | 0.00 | 0.00 | 29.47 | 3.01 |
149 | 157 | 8.367660 | AGTTCATAGTGGAATCTCTACAAAGA | 57.632 | 34.615 | 0.00 | 0.00 | 29.47 | 2.52 |
150 | 158 | 9.522804 | GTAGTTCATAGTGGAATCTCTACAAAG | 57.477 | 37.037 | 0.00 | 0.00 | 30.38 | 2.77 |
151 | 159 | 9.031537 | TGTAGTTCATAGTGGAATCTCTACAAA | 57.968 | 33.333 | 0.00 | 0.00 | 34.07 | 2.83 |
153 | 161 | 8.768501 | ATGTAGTTCATAGTGGAATCTCTACA | 57.231 | 34.615 | 0.00 | 0.00 | 37.82 | 2.74 |
155 | 163 | 9.000486 | CGTATGTAGTTCATAGTGGAATCTCTA | 58.000 | 37.037 | 0.00 | 0.00 | 39.36 | 2.43 |
157 | 165 | 7.040617 | TCCGTATGTAGTTCATAGTGGAATCTC | 60.041 | 40.741 | 7.73 | 0.00 | 39.60 | 2.75 |
158 | 166 | 6.776116 | TCCGTATGTAGTTCATAGTGGAATCT | 59.224 | 38.462 | 7.73 | 0.00 | 39.60 | 2.40 |
160 | 168 | 6.971726 | TCCGTATGTAGTTCATAGTGGAAT | 57.028 | 37.500 | 7.73 | 0.00 | 39.60 | 3.01 |
161 | 169 | 6.322969 | ACATCCGTATGTAGTTCATAGTGGAA | 59.677 | 38.462 | 12.08 | 0.00 | 44.66 | 3.53 |
162 | 170 | 5.831525 | ACATCCGTATGTAGTTCATAGTGGA | 59.168 | 40.000 | 11.01 | 11.01 | 44.66 | 4.02 |
163 | 171 | 6.085555 | ACATCCGTATGTAGTTCATAGTGG | 57.914 | 41.667 | 0.00 | 2.99 | 44.66 | 4.00 |
179 | 187 | 9.944376 | ACTTAAAATGCATCTATATACATCCGT | 57.056 | 29.630 | 0.00 | 0.00 | 0.00 | 4.69 |
188 | 196 | 9.625747 | TGAATCCACACTTAAAATGCATCTATA | 57.374 | 29.630 | 0.00 | 0.00 | 0.00 | 1.31 |
189 | 197 | 8.523915 | TGAATCCACACTTAAAATGCATCTAT | 57.476 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
190 | 198 | 7.936496 | TGAATCCACACTTAAAATGCATCTA | 57.064 | 32.000 | 0.00 | 0.00 | 0.00 | 1.98 |
191 | 199 | 6.839124 | TGAATCCACACTTAAAATGCATCT | 57.161 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
192 | 200 | 7.760794 | TGAATGAATCCACACTTAAAATGCATC | 59.239 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
193 | 201 | 7.613585 | TGAATGAATCCACACTTAAAATGCAT | 58.386 | 30.769 | 0.00 | 0.00 | 0.00 | 3.96 |
194 | 202 | 6.990798 | TGAATGAATCCACACTTAAAATGCA | 58.009 | 32.000 | 0.00 | 0.00 | 0.00 | 3.96 |
195 | 203 | 8.483307 | AATGAATGAATCCACACTTAAAATGC | 57.517 | 30.769 | 0.00 | 0.00 | 0.00 | 3.56 |
198 | 206 | 8.772705 | GCAAAATGAATGAATCCACACTTAAAA | 58.227 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
199 | 207 | 8.149647 | AGCAAAATGAATGAATCCACACTTAAA | 58.850 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
200 | 208 | 7.669427 | AGCAAAATGAATGAATCCACACTTAA | 58.331 | 30.769 | 0.00 | 0.00 | 0.00 | 1.85 |
201 | 209 | 7.230849 | AGCAAAATGAATGAATCCACACTTA | 57.769 | 32.000 | 0.00 | 0.00 | 0.00 | 2.24 |
202 | 210 | 6.105397 | AGCAAAATGAATGAATCCACACTT | 57.895 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
203 | 211 | 5.337009 | GGAGCAAAATGAATGAATCCACACT | 60.337 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
204 | 212 | 4.866486 | GGAGCAAAATGAATGAATCCACAC | 59.134 | 41.667 | 0.00 | 0.00 | 0.00 | 3.82 |
205 | 213 | 4.380761 | CGGAGCAAAATGAATGAATCCACA | 60.381 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
206 | 214 | 4.107622 | CGGAGCAAAATGAATGAATCCAC | 58.892 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
207 | 215 | 3.763360 | ACGGAGCAAAATGAATGAATCCA | 59.237 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
208 | 216 | 4.376340 | ACGGAGCAAAATGAATGAATCC | 57.624 | 40.909 | 0.00 | 0.00 | 0.00 | 3.01 |
209 | 217 | 6.498304 | ACATACGGAGCAAAATGAATGAATC | 58.502 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
210 | 218 | 6.455360 | ACATACGGAGCAAAATGAATGAAT | 57.545 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
211 | 219 | 5.895636 | ACATACGGAGCAAAATGAATGAA | 57.104 | 34.783 | 0.00 | 0.00 | 0.00 | 2.57 |
212 | 220 | 6.112734 | ACTACATACGGAGCAAAATGAATGA | 58.887 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
213 | 221 | 6.363577 | ACTACATACGGAGCAAAATGAATG | 57.636 | 37.500 | 0.00 | 0.00 | 0.00 | 2.67 |
214 | 222 | 5.527582 | GGACTACATACGGAGCAAAATGAAT | 59.472 | 40.000 | 0.00 | 0.00 | 0.00 | 2.57 |
215 | 223 | 4.873827 | GGACTACATACGGAGCAAAATGAA | 59.126 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
216 | 224 | 4.081365 | TGGACTACATACGGAGCAAAATGA | 60.081 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
217 | 225 | 4.034048 | GTGGACTACATACGGAGCAAAATG | 59.966 | 45.833 | 0.00 | 0.00 | 0.00 | 2.32 |
218 | 226 | 4.189231 | GTGGACTACATACGGAGCAAAAT | 58.811 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
219 | 227 | 3.592059 | GTGGACTACATACGGAGCAAAA | 58.408 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
220 | 228 | 2.093869 | GGTGGACTACATACGGAGCAAA | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
221 | 229 | 1.479323 | GGTGGACTACATACGGAGCAA | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 3.91 |
222 | 230 | 1.108776 | GGTGGACTACATACGGAGCA | 58.891 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
223 | 231 | 0.388294 | GGGTGGACTACATACGGAGC | 59.612 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
224 | 232 | 1.681793 | CTGGGTGGACTACATACGGAG | 59.318 | 57.143 | 0.00 | 0.00 | 0.00 | 4.63 |
225 | 233 | 1.006281 | ACTGGGTGGACTACATACGGA | 59.994 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
226 | 234 | 1.136305 | CACTGGGTGGACTACATACGG | 59.864 | 57.143 | 0.00 | 0.00 | 0.00 | 4.02 |
227 | 235 | 2.097036 | TCACTGGGTGGACTACATACG | 58.903 | 52.381 | 0.00 | 0.00 | 33.87 | 3.06 |
228 | 236 | 4.546829 | TTTCACTGGGTGGACTACATAC | 57.453 | 45.455 | 0.00 | 0.00 | 33.87 | 2.39 |
229 | 237 | 5.030147 | AGATTTCACTGGGTGGACTACATA | 58.970 | 41.667 | 0.00 | 0.00 | 33.87 | 2.29 |
230 | 238 | 3.846588 | AGATTTCACTGGGTGGACTACAT | 59.153 | 43.478 | 0.00 | 0.00 | 33.87 | 2.29 |
231 | 239 | 3.248024 | AGATTTCACTGGGTGGACTACA | 58.752 | 45.455 | 0.00 | 0.00 | 33.87 | 2.74 |
232 | 240 | 3.515901 | AGAGATTTCACTGGGTGGACTAC | 59.484 | 47.826 | 0.00 | 0.00 | 33.87 | 2.73 |
233 | 241 | 3.791320 | AGAGATTTCACTGGGTGGACTA | 58.209 | 45.455 | 0.00 | 0.00 | 33.87 | 2.59 |
234 | 242 | 2.625639 | AGAGATTTCACTGGGTGGACT | 58.374 | 47.619 | 0.00 | 0.00 | 33.87 | 3.85 |
235 | 243 | 3.260884 | TGTAGAGATTTCACTGGGTGGAC | 59.739 | 47.826 | 0.00 | 0.00 | 33.87 | 4.02 |
236 | 244 | 3.516586 | TGTAGAGATTTCACTGGGTGGA | 58.483 | 45.455 | 0.00 | 0.00 | 33.87 | 4.02 |
237 | 245 | 3.981071 | TGTAGAGATTTCACTGGGTGG | 57.019 | 47.619 | 0.00 | 0.00 | 33.87 | 4.61 |
238 | 246 | 5.409826 | GTCTTTGTAGAGATTTCACTGGGTG | 59.590 | 44.000 | 0.00 | 0.00 | 34.45 | 4.61 |
239 | 247 | 5.308237 | AGTCTTTGTAGAGATTTCACTGGGT | 59.692 | 40.000 | 0.00 | 0.00 | 0.00 | 4.51 |
240 | 248 | 5.799213 | AGTCTTTGTAGAGATTTCACTGGG | 58.201 | 41.667 | 0.00 | 0.00 | 0.00 | 4.45 |
241 | 249 | 7.872993 | TGTAAGTCTTTGTAGAGATTTCACTGG | 59.127 | 37.037 | 0.00 | 0.00 | 29.76 | 4.00 |
242 | 250 | 8.818141 | TGTAAGTCTTTGTAGAGATTTCACTG | 57.182 | 34.615 | 0.00 | 0.00 | 29.76 | 3.66 |
248 | 256 | 9.793259 | TCCAAAATGTAAGTCTTTGTAGAGATT | 57.207 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
249 | 257 | 9.793259 | TTCCAAAATGTAAGTCTTTGTAGAGAT | 57.207 | 29.630 | 0.00 | 0.00 | 0.00 | 2.75 |
250 | 258 | 9.052759 | GTTCCAAAATGTAAGTCTTTGTAGAGA | 57.947 | 33.333 | 0.00 | 0.00 | 0.00 | 3.10 |
251 | 259 | 8.009974 | CGTTCCAAAATGTAAGTCTTTGTAGAG | 58.990 | 37.037 | 0.00 | 0.00 | 0.00 | 2.43 |
252 | 260 | 7.041644 | CCGTTCCAAAATGTAAGTCTTTGTAGA | 60.042 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
253 | 261 | 7.041644 | TCCGTTCCAAAATGTAAGTCTTTGTAG | 60.042 | 37.037 | 0.00 | 0.00 | 0.00 | 2.74 |
254 | 262 | 6.766944 | TCCGTTCCAAAATGTAAGTCTTTGTA | 59.233 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
255 | 263 | 5.591067 | TCCGTTCCAAAATGTAAGTCTTTGT | 59.409 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
256 | 264 | 6.067263 | TCCGTTCCAAAATGTAAGTCTTTG | 57.933 | 37.500 | 0.00 | 0.00 | 0.00 | 2.77 |
257 | 265 | 5.240844 | CCTCCGTTCCAAAATGTAAGTCTTT | 59.759 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
258 | 266 | 4.760204 | CCTCCGTTCCAAAATGTAAGTCTT | 59.240 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
259 | 267 | 4.324267 | CCTCCGTTCCAAAATGTAAGTCT | 58.676 | 43.478 | 0.00 | 0.00 | 0.00 | 3.24 |
260 | 268 | 3.439129 | CCCTCCGTTCCAAAATGTAAGTC | 59.561 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
261 | 269 | 3.073356 | TCCCTCCGTTCCAAAATGTAAGT | 59.927 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
262 | 270 | 3.681593 | TCCCTCCGTTCCAAAATGTAAG | 58.318 | 45.455 | 0.00 | 0.00 | 0.00 | 2.34 |
263 | 271 | 3.073356 | ACTCCCTCCGTTCCAAAATGTAA | 59.927 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
264 | 272 | 2.640826 | ACTCCCTCCGTTCCAAAATGTA | 59.359 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
265 | 273 | 1.423921 | ACTCCCTCCGTTCCAAAATGT | 59.576 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
266 | 274 | 2.200373 | ACTCCCTCCGTTCCAAAATG | 57.800 | 50.000 | 0.00 | 0.00 | 0.00 | 2.32 |
267 | 275 | 5.427481 | TCTTATACTCCCTCCGTTCCAAAAT | 59.573 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
268 | 276 | 4.778958 | TCTTATACTCCCTCCGTTCCAAAA | 59.221 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
269 | 277 | 4.355549 | TCTTATACTCCCTCCGTTCCAAA | 58.644 | 43.478 | 0.00 | 0.00 | 0.00 | 3.28 |
270 | 278 | 3.958798 | CTCTTATACTCCCTCCGTTCCAA | 59.041 | 47.826 | 0.00 | 0.00 | 0.00 | 3.53 |
271 | 279 | 3.053095 | ACTCTTATACTCCCTCCGTTCCA | 60.053 | 47.826 | 0.00 | 0.00 | 0.00 | 3.53 |
272 | 280 | 3.318557 | CACTCTTATACTCCCTCCGTTCC | 59.681 | 52.174 | 0.00 | 0.00 | 0.00 | 3.62 |
273 | 281 | 3.952967 | ACACTCTTATACTCCCTCCGTTC | 59.047 | 47.826 | 0.00 | 0.00 | 0.00 | 3.95 |
274 | 282 | 3.978610 | ACACTCTTATACTCCCTCCGTT | 58.021 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
275 | 283 | 3.666345 | ACACTCTTATACTCCCTCCGT | 57.334 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
276 | 284 | 5.826737 | TCTAAACACTCTTATACTCCCTCCG | 59.173 | 44.000 | 0.00 | 0.00 | 0.00 | 4.63 |
277 | 285 | 7.726738 | AGATCTAAACACTCTTATACTCCCTCC | 59.273 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
278 | 286 | 8.700439 | AGATCTAAACACTCTTATACTCCCTC | 57.300 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
279 | 287 | 7.446013 | CGAGATCTAAACACTCTTATACTCCCT | 59.554 | 40.741 | 0.00 | 0.00 | 0.00 | 4.20 |
280 | 288 | 7.586747 | CGAGATCTAAACACTCTTATACTCCC | 58.413 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
281 | 289 | 7.079475 | GCGAGATCTAAACACTCTTATACTCC | 58.921 | 42.308 | 0.00 | 0.00 | 0.00 | 3.85 |
282 | 290 | 7.640852 | TGCGAGATCTAAACACTCTTATACTC | 58.359 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
283 | 291 | 7.569639 | TGCGAGATCTAAACACTCTTATACT | 57.430 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
284 | 292 | 7.863375 | ACATGCGAGATCTAAACACTCTTATAC | 59.137 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
285 | 293 | 7.862873 | CACATGCGAGATCTAAACACTCTTATA | 59.137 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
286 | 294 | 6.699204 | CACATGCGAGATCTAAACACTCTTAT | 59.301 | 38.462 | 0.00 | 0.00 | 0.00 | 1.73 |
287 | 295 | 6.036470 | CACATGCGAGATCTAAACACTCTTA | 58.964 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
288 | 296 | 4.867047 | CACATGCGAGATCTAAACACTCTT | 59.133 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
289 | 297 | 4.081972 | ACACATGCGAGATCTAAACACTCT | 60.082 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
290 | 298 | 4.032217 | CACACATGCGAGATCTAAACACTC | 59.968 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
291 | 299 | 3.928992 | CACACATGCGAGATCTAAACACT | 59.071 | 43.478 | 0.00 | 0.00 | 0.00 | 3.55 |
292 | 300 | 3.062639 | CCACACATGCGAGATCTAAACAC | 59.937 | 47.826 | 0.00 | 0.00 | 0.00 | 3.32 |
293 | 301 | 3.261580 | CCACACATGCGAGATCTAAACA | 58.738 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
294 | 302 | 3.262420 | ACCACACATGCGAGATCTAAAC | 58.738 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
295 | 303 | 3.610040 | ACCACACATGCGAGATCTAAA | 57.390 | 42.857 | 0.00 | 0.00 | 0.00 | 1.85 |
296 | 304 | 3.195610 | AGAACCACACATGCGAGATCTAA | 59.804 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
297 | 305 | 2.760650 | AGAACCACACATGCGAGATCTA | 59.239 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
298 | 306 | 1.552337 | AGAACCACACATGCGAGATCT | 59.448 | 47.619 | 0.00 | 0.00 | 0.00 | 2.75 |
340 | 355 | 6.616947 | TCGCAAACAAAAAGAAGAAAGAAGA | 58.383 | 32.000 | 0.00 | 0.00 | 0.00 | 2.87 |
341 | 356 | 6.869421 | TCGCAAACAAAAAGAAGAAAGAAG | 57.131 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
342 | 357 | 7.596995 | TCTTTCGCAAACAAAAAGAAGAAAGAA | 59.403 | 29.630 | 12.89 | 0.82 | 44.94 | 2.52 |
343 | 358 | 7.087639 | TCTTTCGCAAACAAAAAGAAGAAAGA | 58.912 | 30.769 | 11.68 | 11.68 | 45.39 | 2.52 |
344 | 359 | 7.273381 | TCTCTTTCGCAAACAAAAAGAAGAAAG | 59.727 | 33.333 | 7.93 | 7.93 | 42.47 | 2.62 |
345 | 360 | 7.087639 | TCTCTTTCGCAAACAAAAAGAAGAAA | 58.912 | 30.769 | 0.00 | 0.00 | 38.25 | 2.52 |
346 | 361 | 6.616947 | TCTCTTTCGCAAACAAAAAGAAGAA | 58.383 | 32.000 | 0.00 | 0.00 | 38.25 | 2.52 |
347 | 362 | 6.189677 | TCTCTTTCGCAAACAAAAAGAAGA | 57.810 | 33.333 | 0.00 | 0.00 | 38.25 | 2.87 |
348 | 363 | 6.869421 | TTCTCTTTCGCAAACAAAAAGAAG | 57.131 | 33.333 | 0.00 | 0.00 | 38.25 | 2.85 |
349 | 364 | 6.866248 | AGTTTCTCTTTCGCAAACAAAAAGAA | 59.134 | 30.769 | 0.00 | 0.00 | 38.25 | 2.52 |
350 | 365 | 6.386654 | AGTTTCTCTTTCGCAAACAAAAAGA | 58.613 | 32.000 | 0.00 | 0.00 | 36.84 | 2.52 |
351 | 366 | 6.632171 | AGTTTCTCTTTCGCAAACAAAAAG | 57.368 | 33.333 | 0.00 | 0.00 | 33.26 | 2.27 |
352 | 367 | 8.188139 | AGATAGTTTCTCTTTCGCAAACAAAAA | 58.812 | 29.630 | 0.00 | 0.00 | 33.26 | 1.94 |
353 | 368 | 7.703328 | AGATAGTTTCTCTTTCGCAAACAAAA | 58.297 | 30.769 | 0.00 | 0.00 | 33.26 | 2.44 |
354 | 369 | 7.259290 | AGATAGTTTCTCTTTCGCAAACAAA | 57.741 | 32.000 | 0.00 | 0.00 | 33.26 | 2.83 |
355 | 370 | 6.861065 | AGATAGTTTCTCTTTCGCAAACAA | 57.139 | 33.333 | 0.00 | 0.00 | 33.26 | 2.83 |
356 | 371 | 6.861065 | AAGATAGTTTCTCTTTCGCAAACA | 57.139 | 33.333 | 0.00 | 0.00 | 33.26 | 2.83 |
357 | 372 | 7.768220 | GAAAGATAGTTTCTCTTTCGCAAAC | 57.232 | 36.000 | 9.32 | 0.00 | 44.97 | 2.93 |
374 | 389 | 9.480861 | CCACACCCTATGATCTATAGAAAGATA | 57.519 | 37.037 | 6.52 | 3.08 | 41.10 | 1.98 |
375 | 390 | 8.180165 | TCCACACCCTATGATCTATAGAAAGAT | 58.820 | 37.037 | 6.52 | 2.04 | 41.10 | 2.40 |
376 | 391 | 7.535738 | TCCACACCCTATGATCTATAGAAAGA | 58.464 | 38.462 | 6.52 | 0.00 | 41.10 | 2.52 |
377 | 392 | 7.782897 | TCCACACCCTATGATCTATAGAAAG | 57.217 | 40.000 | 6.52 | 2.61 | 41.10 | 2.62 |
378 | 393 | 7.955750 | TCATCCACACCCTATGATCTATAGAAA | 59.044 | 37.037 | 6.52 | 0.00 | 41.10 | 2.52 |
379 | 394 | 7.478721 | TCATCCACACCCTATGATCTATAGAA | 58.521 | 38.462 | 6.52 | 0.00 | 41.10 | 2.10 |
380 | 395 | 7.044496 | TCATCCACACCCTATGATCTATAGA | 57.956 | 40.000 | 4.57 | 4.57 | 41.10 | 1.98 |
381 | 396 | 7.147759 | CCTTCATCCACACCCTATGATCTATAG | 60.148 | 44.444 | 0.00 | 0.00 | 38.80 | 1.31 |
382 | 397 | 6.669591 | CCTTCATCCACACCCTATGATCTATA | 59.330 | 42.308 | 0.00 | 0.00 | 30.17 | 1.31 |
383 | 398 | 5.486775 | CCTTCATCCACACCCTATGATCTAT | 59.513 | 44.000 | 0.00 | 0.00 | 30.17 | 1.98 |
384 | 399 | 4.840680 | CCTTCATCCACACCCTATGATCTA | 59.159 | 45.833 | 0.00 | 0.00 | 30.17 | 1.98 |
393 | 408 | 1.906574 | TGTAGACCTTCATCCACACCC | 59.093 | 52.381 | 0.00 | 0.00 | 0.00 | 4.61 |
414 | 429 | 2.808543 | CTGCAAAACCAGAGTCTACCAC | 59.191 | 50.000 | 0.00 | 0.00 | 34.77 | 4.16 |
422 | 437 | 3.152341 | ACAATCTCCTGCAAAACCAGAG | 58.848 | 45.455 | 0.00 | 0.00 | 34.77 | 3.35 |
423 | 438 | 3.228188 | ACAATCTCCTGCAAAACCAGA | 57.772 | 42.857 | 0.00 | 0.00 | 34.77 | 3.86 |
442 | 457 | 0.966370 | AGACTCCACTCCAGGCGTAC | 60.966 | 60.000 | 0.00 | 0.00 | 0.00 | 3.67 |
443 | 458 | 0.251653 | AAGACTCCACTCCAGGCGTA | 60.252 | 55.000 | 0.00 | 0.00 | 0.00 | 4.42 |
444 | 459 | 1.534235 | AAGACTCCACTCCAGGCGT | 60.534 | 57.895 | 0.00 | 0.00 | 0.00 | 5.68 |
445 | 460 | 1.079543 | CAAGACTCCACTCCAGGCG | 60.080 | 63.158 | 0.00 | 0.00 | 0.00 | 5.52 |
446 | 461 | 1.194781 | TCCAAGACTCCACTCCAGGC | 61.195 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
447 | 462 | 0.901124 | CTCCAAGACTCCACTCCAGG | 59.099 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
448 | 463 | 0.901124 | CCTCCAAGACTCCACTCCAG | 59.099 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
449 | 464 | 1.194781 | GCCTCCAAGACTCCACTCCA | 61.195 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
450 | 465 | 1.599576 | GCCTCCAAGACTCCACTCC | 59.400 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
451 | 466 | 1.194781 | TGGCCTCCAAGACTCCACTC | 61.195 | 60.000 | 3.32 | 0.00 | 0.00 | 3.51 |
452 | 467 | 0.548682 | ATGGCCTCCAAGACTCCACT | 60.549 | 55.000 | 3.32 | 0.00 | 36.95 | 4.00 |
453 | 468 | 0.393537 | CATGGCCTCCAAGACTCCAC | 60.394 | 60.000 | 3.32 | 0.00 | 36.95 | 4.02 |
458 | 473 | 1.477558 | CCATACCATGGCCTCCAAGAC | 60.478 | 57.143 | 13.04 | 0.00 | 44.70 | 3.01 |
459 | 474 | 0.846015 | CCATACCATGGCCTCCAAGA | 59.154 | 55.000 | 13.04 | 0.00 | 44.70 | 3.02 |
474 | 489 | 4.395854 | CACATAAAAGCTCACAGTGCCATA | 59.604 | 41.667 | 0.00 | 0.00 | 0.00 | 2.74 |
475 | 490 | 3.192001 | CACATAAAAGCTCACAGTGCCAT | 59.808 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
512 | 533 | 1.048601 | CGGTACAGGCCATCTACCAT | 58.951 | 55.000 | 18.65 | 0.00 | 0.00 | 3.55 |
528 | 549 | 3.081804 | CAAAGGAAAATGCCTAGTCGGT | 58.918 | 45.455 | 0.00 | 0.00 | 37.26 | 4.69 |
552 | 578 | 7.259882 | TCACATTATGCATGACCATCTTTTTC | 58.740 | 34.615 | 10.16 | 0.00 | 36.24 | 2.29 |
557 | 583 | 5.061853 | GTCTCACATTATGCATGACCATCT | 58.938 | 41.667 | 10.16 | 0.00 | 36.24 | 2.90 |
563 | 589 | 3.197265 | CGGTGTCTCACATTATGCATGA | 58.803 | 45.455 | 10.16 | 0.00 | 35.86 | 3.07 |
570 | 596 | 3.737032 | TCACAACGGTGTCTCACATTA | 57.263 | 42.857 | 1.16 | 0.00 | 45.45 | 1.90 |
595 | 623 | 8.677300 | GCAAATTCTAGATTCCTTCATGTACAA | 58.323 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
596 | 624 | 8.049117 | AGCAAATTCTAGATTCCTTCATGTACA | 58.951 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
598 | 626 | 9.466497 | AAAGCAAATTCTAGATTCCTTCATGTA | 57.534 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
635 | 663 | 6.811253 | TGTATGTAAACTGGGATTGTGTTC | 57.189 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
655 | 683 | 8.177119 | ACTGCAAAAGGTCTTCAAAATATGTA | 57.823 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
665 | 693 | 5.452777 | GTTGATGTACTGCAAAAGGTCTTC | 58.547 | 41.667 | 0.00 | 0.00 | 0.00 | 2.87 |
676 | 704 | 3.674997 | TCCAAAGAGGTTGATGTACTGC | 58.325 | 45.455 | 0.00 | 0.00 | 39.87 | 4.40 |
739 | 1134 | 3.140144 | TGAGGGGTGGAAAGAGTTCATTT | 59.860 | 43.478 | 0.00 | 0.00 | 35.25 | 2.32 |
740 | 1135 | 2.716424 | TGAGGGGTGGAAAGAGTTCATT | 59.284 | 45.455 | 0.00 | 0.00 | 35.25 | 2.57 |
783 | 1178 | 6.642707 | AAAATTGACCCTCGAATTTACACA | 57.357 | 33.333 | 0.00 | 0.00 | 32.66 | 3.72 |
842 | 1241 | 4.148079 | TGGGCACAAAGTATTTCATGTCA | 58.852 | 39.130 | 0.00 | 0.00 | 35.03 | 3.58 |
860 | 1259 | 0.466372 | GGTCTCTTAATGGGCTGGGC | 60.466 | 60.000 | 0.00 | 0.00 | 0.00 | 5.36 |
948 | 1347 | 8.317679 | AGTGCTATATAGTCCCAATCAAGAATC | 58.682 | 37.037 | 11.38 | 0.00 | 0.00 | 2.52 |
949 | 1348 | 8.212259 | AGTGCTATATAGTCCCAATCAAGAAT | 57.788 | 34.615 | 11.38 | 0.00 | 0.00 | 2.40 |
952 | 1351 | 6.212388 | AGGAGTGCTATATAGTCCCAATCAAG | 59.788 | 42.308 | 11.38 | 0.00 | 38.22 | 3.02 |
953 | 1352 | 6.084738 | AGGAGTGCTATATAGTCCCAATCAA | 58.915 | 40.000 | 11.38 | 0.00 | 38.22 | 2.57 |
954 | 1353 | 5.655394 | AGGAGTGCTATATAGTCCCAATCA | 58.345 | 41.667 | 11.38 | 0.00 | 38.22 | 2.57 |
955 | 1354 | 7.906199 | ATAGGAGTGCTATATAGTCCCAATC | 57.094 | 40.000 | 11.38 | 9.08 | 38.22 | 2.67 |
958 | 1357 | 9.784376 | AATAAATAGGAGTGCTATATAGTCCCA | 57.216 | 33.333 | 11.38 | 0.68 | 38.22 | 4.37 |
1013 | 1716 | 0.534203 | TCAAGGCTTTGTGTCCGTCC | 60.534 | 55.000 | 8.56 | 0.00 | 35.73 | 4.79 |
1014 | 1717 | 0.868406 | CTCAAGGCTTTGTGTCCGTC | 59.132 | 55.000 | 8.56 | 0.00 | 35.73 | 4.79 |
1015 | 1718 | 0.468226 | TCTCAAGGCTTTGTGTCCGT | 59.532 | 50.000 | 8.56 | 0.00 | 35.73 | 4.69 |
1016 | 1719 | 1.593196 | TTCTCAAGGCTTTGTGTCCG | 58.407 | 50.000 | 8.56 | 0.00 | 35.73 | 4.79 |
1017 | 1720 | 3.214328 | TCTTTCTCAAGGCTTTGTGTCC | 58.786 | 45.455 | 8.56 | 0.00 | 35.73 | 4.02 |
1056 | 1759 | 4.149571 | CGTAGAGAATCCATTCGATGCAAG | 59.850 | 45.833 | 0.00 | 0.00 | 41.56 | 4.01 |
1059 | 1762 | 3.643763 | ACGTAGAGAATCCATTCGATGC | 58.356 | 45.455 | 0.00 | 0.00 | 41.56 | 3.91 |
1292 | 1999 | 1.445582 | CCTCCGTGTAGTTGGCGAC | 60.446 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
1342 | 2049 | 2.081212 | GGTGAACGTGCTCGACTCG | 61.081 | 63.158 | 16.04 | 0.00 | 40.98 | 4.18 |
1463 | 2170 | 1.374252 | CACGTCGGAGAAAGTGGGG | 60.374 | 63.158 | 0.00 | 0.00 | 41.52 | 4.96 |
1614 | 2324 | 0.526524 | GTCGCTCCTCATGAAGTCCG | 60.527 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1795 | 2505 | 2.997897 | GTGGTGAGCTCCCCGTCT | 60.998 | 66.667 | 12.15 | 0.00 | 0.00 | 4.18 |
1904 | 2614 | 1.671379 | GGTCCTCCTTGAACACGGC | 60.671 | 63.158 | 0.00 | 0.00 | 0.00 | 5.68 |
1906 | 2616 | 0.969894 | AGAGGTCCTCCTTGAACACG | 59.030 | 55.000 | 15.72 | 0.00 | 45.24 | 4.49 |
1981 | 2691 | 2.680352 | ACCTCGGCGTCCATGTCT | 60.680 | 61.111 | 6.85 | 0.00 | 0.00 | 3.41 |
2006 | 2716 | 2.040178 | GTAGATGAACCGGATCAGGGT | 58.960 | 52.381 | 19.86 | 9.93 | 40.20 | 4.34 |
2042 | 2752 | 1.742880 | GCTGCTGCTTCATGTCCGA | 60.743 | 57.895 | 8.53 | 0.00 | 36.03 | 4.55 |
2117 | 2827 | 2.008329 | GATGTGCTTCAGCTTCTCCAG | 58.992 | 52.381 | 0.00 | 0.00 | 42.66 | 3.86 |
2218 | 2928 | 2.970974 | GCACGCCTTCTTCAGCACC | 61.971 | 63.158 | 0.00 | 0.00 | 0.00 | 5.01 |
2254 | 2964 | 0.674534 | CGGCTACTAGGTTAGCAGGG | 59.325 | 60.000 | 12.86 | 0.70 | 40.86 | 4.45 |
2365 | 3075 | 1.471684 | ACGAACGTGGACTGATCTACC | 59.528 | 52.381 | 0.00 | 0.00 | 32.82 | 3.18 |
2368 | 3078 | 0.388649 | GCACGAACGTGGACTGATCT | 60.389 | 55.000 | 24.71 | 0.00 | 45.49 | 2.75 |
2458 | 3168 | 6.446781 | TGCACGGGTATTAGCTATATACTC | 57.553 | 41.667 | 17.80 | 15.20 | 0.00 | 2.59 |
2459 | 3169 | 7.265673 | CAATGCACGGGTATTAGCTATATACT | 58.734 | 38.462 | 0.00 | 4.53 | 0.00 | 2.12 |
2460 | 3170 | 6.018994 | GCAATGCACGGGTATTAGCTATATAC | 60.019 | 42.308 | 0.00 | 13.40 | 0.00 | 1.47 |
2462 | 3172 | 4.876107 | GCAATGCACGGGTATTAGCTATAT | 59.124 | 41.667 | 0.00 | 0.00 | 0.00 | 0.86 |
2464 | 3174 | 3.074412 | GCAATGCACGGGTATTAGCTAT | 58.926 | 45.455 | 0.00 | 0.00 | 0.00 | 2.97 |
2468 | 3178 | 3.550639 | CCATTGCAATGCACGGGTATTAG | 60.551 | 47.826 | 30.15 | 10.97 | 38.71 | 1.73 |
2469 | 3179 | 2.360483 | CCATTGCAATGCACGGGTATTA | 59.640 | 45.455 | 30.15 | 0.00 | 38.71 | 0.98 |
2488 | 3207 | 4.320641 | GCGACTAAAATAAAGTTGTGCCCA | 60.321 | 41.667 | 0.00 | 0.00 | 31.92 | 5.36 |
2492 | 3211 | 6.792250 | CACTGAGCGACTAAAATAAAGTTGTG | 59.208 | 38.462 | 0.00 | 0.00 | 31.92 | 3.33 |
2558 | 3281 | 1.140312 | ACCTCTTGCCTCCTGACAAA | 58.860 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2570 | 3293 | 8.792830 | TCAGGAACATATCTTTTTACCTCTTG | 57.207 | 34.615 | 0.00 | 0.00 | 0.00 | 3.02 |
2573 | 3296 | 9.620259 | AATCTCAGGAACATATCTTTTTACCTC | 57.380 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
2708 | 3791 | 2.396590 | TTTCTAACCATCACCTCGGC | 57.603 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
2718 | 3801 | 6.661805 | GGTGACAATCCCTATTTTTCTAACCA | 59.338 | 38.462 | 0.00 | 0.00 | 0.00 | 3.67 |
2722 | 3805 | 6.011981 | ACCAGGTGACAATCCCTATTTTTCTA | 60.012 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
2723 | 3806 | 5.222337 | ACCAGGTGACAATCCCTATTTTTCT | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2764 | 3852 | 9.327628 | CTCTTCCATATATGCTCCTTCATATTG | 57.672 | 37.037 | 7.24 | 2.15 | 39.57 | 1.90 |
2768 | 3856 | 5.789575 | ACCTCTTCCATATATGCTCCTTCAT | 59.210 | 40.000 | 7.24 | 0.00 | 0.00 | 2.57 |
2769 | 3857 | 5.012458 | CACCTCTTCCATATATGCTCCTTCA | 59.988 | 44.000 | 7.24 | 0.00 | 0.00 | 3.02 |
2770 | 3858 | 5.486526 | CACCTCTTCCATATATGCTCCTTC | 58.513 | 45.833 | 7.24 | 0.00 | 0.00 | 3.46 |
2776 | 3864 | 5.376625 | TGTTTCCACCTCTTCCATATATGC | 58.623 | 41.667 | 7.24 | 0.00 | 0.00 | 3.14 |
2777 | 3865 | 7.227512 | GTCTTGTTTCCACCTCTTCCATATATG | 59.772 | 40.741 | 5.68 | 5.68 | 0.00 | 1.78 |
2778 | 3866 | 7.283329 | GTCTTGTTTCCACCTCTTCCATATAT | 58.717 | 38.462 | 0.00 | 0.00 | 0.00 | 0.86 |
2779 | 3867 | 6.352737 | GGTCTTGTTTCCACCTCTTCCATATA | 60.353 | 42.308 | 0.00 | 0.00 | 0.00 | 0.86 |
2781 | 3869 | 4.263331 | GGTCTTGTTTCCACCTCTTCCATA | 60.263 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
2792 | 5032 | 6.531503 | TGTAATTTGTTGGTCTTGTTTCCA | 57.468 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
2801 | 5041 | 5.516090 | ACACGACATTGTAATTTGTTGGTC | 58.484 | 37.500 | 0.00 | 0.00 | 32.51 | 4.02 |
2827 | 5067 | 9.513727 | GTTGATTTGGCATTGTAATTTGTTTTT | 57.486 | 25.926 | 0.00 | 0.00 | 0.00 | 1.94 |
2829 | 5069 | 8.218338 | TGTTGATTTGGCATTGTAATTTGTTT | 57.782 | 26.923 | 0.00 | 0.00 | 0.00 | 2.83 |
2830 | 5070 | 7.798596 | TGTTGATTTGGCATTGTAATTTGTT | 57.201 | 28.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2832 | 5072 | 8.030744 | TGATGTTGATTTGGCATTGTAATTTG | 57.969 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
2833 | 5073 | 8.618702 | TTGATGTTGATTTGGCATTGTAATTT | 57.381 | 26.923 | 0.00 | 0.00 | 0.00 | 1.82 |
2835 | 5075 | 8.670135 | CAATTGATGTTGATTTGGCATTGTAAT | 58.330 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
3023 | 5379 | 7.164008 | GCTTTTGTTGACAATAAATTTGTGTGC | 59.836 | 33.333 | 10.44 | 5.40 | 35.55 | 4.57 |
3024 | 5380 | 8.173775 | TGCTTTTGTTGACAATAAATTTGTGTG | 58.826 | 29.630 | 10.44 | 5.37 | 35.55 | 3.82 |
3025 | 5381 | 8.174422 | GTGCTTTTGTTGACAATAAATTTGTGT | 58.826 | 29.630 | 10.44 | 8.59 | 35.55 | 3.72 |
3026 | 5382 | 8.173775 | TGTGCTTTTGTTGACAATAAATTTGTG | 58.826 | 29.630 | 10.44 | 1.60 | 35.55 | 3.33 |
3030 | 5386 | 7.012138 | TGCATGTGCTTTTGTTGACAATAAATT | 59.988 | 29.630 | 10.44 | 0.00 | 42.66 | 1.82 |
3043 | 5401 | 6.402766 | CCAAATTTAGGATGCATGTGCTTTTG | 60.403 | 38.462 | 2.46 | 7.21 | 42.66 | 2.44 |
3089 | 5447 | 6.314400 | GTGTGTCAGAAGGCGGTTTAATTATA | 59.686 | 38.462 | 0.00 | 0.00 | 0.00 | 0.98 |
3090 | 5448 | 5.123344 | GTGTGTCAGAAGGCGGTTTAATTAT | 59.877 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
3109 | 5467 | 0.529555 | GGCCGCAATTTTGTGTGTGT | 60.530 | 50.000 | 3.43 | 0.00 | 36.98 | 3.72 |
3110 | 5468 | 0.249405 | AGGCCGCAATTTTGTGTGTG | 60.249 | 50.000 | 0.00 | 0.00 | 36.98 | 3.82 |
3121 | 5480 | 2.284798 | TTTTGTTCGCAAGGCCGCAA | 62.285 | 50.000 | 0.00 | 0.00 | 38.47 | 4.85 |
3150 | 5510 | 2.301346 | CTTGAGGTTTCAGGTTGCTGT | 58.699 | 47.619 | 0.00 | 0.00 | 34.15 | 4.40 |
3192 | 5558 | 5.418310 | AACATTGTTGAACTGGTAACTCG | 57.582 | 39.130 | 0.15 | 0.00 | 37.61 | 4.18 |
3221 | 5597 | 5.602628 | CTTAGCAATACCTCTCCCTGTAAC | 58.397 | 45.833 | 0.00 | 0.00 | 0.00 | 2.50 |
3335 | 5722 | 9.168553 | TGTCTGTATCTAGATTAGGTAGGTAGT | 57.831 | 37.037 | 11.25 | 0.00 | 0.00 | 2.73 |
3414 | 5818 | 7.458409 | AGCTAATTCACATGATTGAAACTGT | 57.542 | 32.000 | 0.00 | 0.00 | 38.95 | 3.55 |
3415 | 5821 | 9.661187 | GATAGCTAATTCACATGATTGAAACTG | 57.339 | 33.333 | 0.00 | 0.00 | 38.95 | 3.16 |
3475 | 5884 | 1.601430 | CGATCGACATCTCTCTCAGCA | 59.399 | 52.381 | 10.26 | 0.00 | 0.00 | 4.41 |
3676 | 6085 | 0.756442 | AGCAAGCAGGCAAGGAACAA | 60.756 | 50.000 | 2.37 | 0.00 | 35.83 | 2.83 |
3714 | 6123 | 2.553086 | CAAGAGAAGATGAGCAGAGGC | 58.447 | 52.381 | 0.00 | 0.00 | 41.61 | 4.70 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.