Multiple sequence alignment - TraesCS2B01G521400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G521400 chr2B 100.000 2372 0 0 1 2372 716359929 716362300 0.000000e+00 4381.0
1 TraesCS2B01G521400 chr2B 95.210 167 8 0 2206 2372 357198343 357198177 5.030000e-67 265.0
2 TraesCS2B01G521400 chr2B 97.500 40 0 1 2170 2208 357515274 357515313 1.520000e-07 67.6
3 TraesCS2B01G521400 chr2B 97.436 39 0 1 2170 2207 395204373 395204411 5.470000e-07 65.8
4 TraesCS2B01G521400 chr2B 95.000 40 1 1 2170 2208 357720134 357720095 7.080000e-06 62.1
5 TraesCS2B01G521400 chr2B 94.872 39 1 1 2170 2207 357345906 357345868 2.550000e-05 60.2
6 TraesCS2B01G521400 chr3A 96.873 2079 57 4 1 2075 66004934 66002860 0.000000e+00 3472.0
7 TraesCS2B01G521400 chr5D 96.825 2079 58 4 1 2075 503264577 503262503 0.000000e+00 3467.0
8 TraesCS2B01G521400 chr5D 96.773 2076 59 4 1 2072 503245471 503247542 0.000000e+00 3456.0
9 TraesCS2B01G521400 chr5D 100.000 36 0 0 2140 2175 3145313 3145278 1.520000e-07 67.6
10 TraesCS2B01G521400 chr2A 96.825 2079 58 4 1 2075 726906256 726904182 0.000000e+00 3467.0
11 TraesCS2B01G521400 chr6D 96.777 2079 59 4 1 2075 389245623 389243549 0.000000e+00 3461.0
12 TraesCS2B01G521400 chr6D 95.210 167 8 0 2206 2372 124533624 124533790 5.030000e-67 265.0
13 TraesCS2B01G521400 chr6D 97.500 40 0 1 2170 2208 32723234 32723195 1.520000e-07 67.6
14 TraesCS2B01G521400 chr3D 96.721 2074 60 4 1 2070 589263327 589261258 0.000000e+00 3446.0
15 TraesCS2B01G521400 chr3D 100.000 36 0 0 2140 2175 154713980 154714015 1.520000e-07 67.6
16 TraesCS2B01G521400 chr2D 96.628 2076 62 4 1 2072 591984808 591986879 0.000000e+00 3439.0
17 TraesCS2B01G521400 chr7B 96.296 2079 69 4 1 2075 663099226 663097152 0.000000e+00 3406.0
18 TraesCS2B01G521400 chr1D 96.296 2079 69 4 1 2075 459904518 459902444 0.000000e+00 3406.0
19 TraesCS2B01G521400 chr1D 100.000 36 0 0 2140 2175 185753981 185754016 1.520000e-07 67.6
20 TraesCS2B01G521400 chrUn 95.808 167 7 0 2206 2372 189408589 189408755 1.080000e-68 270.0
21 TraesCS2B01G521400 chrUn 95.808 167 7 0 2206 2372 251408006 251407840 1.080000e-68 270.0
22 TraesCS2B01G521400 chrUn 95.808 167 7 0 2206 2372 345806648 345806814 1.080000e-68 270.0
23 TraesCS2B01G521400 chrUn 100.000 36 0 0 2140 2175 40096295 40096260 1.520000e-07 67.6
24 TraesCS2B01G521400 chrUn 100.000 36 0 0 2140 2175 393080956 393080921 1.520000e-07 67.6
25 TraesCS2B01G521400 chr7D 95.210 167 8 0 2206 2372 382066182 382066348 5.030000e-67 265.0
26 TraesCS2B01G521400 chr6B 95.210 167 8 0 2206 2372 306998483 306998317 5.030000e-67 265.0
27 TraesCS2B01G521400 chr6B 95.210 167 8 0 2206 2372 613164791 613164625 5.030000e-67 265.0
28 TraesCS2B01G521400 chr3B 94.643 168 8 1 2206 2372 368868135 368867968 2.340000e-65 259.0
29 TraesCS2B01G521400 chr6A 97.500 40 0 1 2170 2208 515527297 515527258 1.520000e-07 67.6
30 TraesCS2B01G521400 chr4D 100.000 36 0 0 2140 2175 123629015 123629050 1.520000e-07 67.6
31 TraesCS2B01G521400 chr4B 97.500 40 0 1 2170 2208 640815629 640815668 1.520000e-07 67.6
32 TraesCS2B01G521400 chr1B 100.000 36 0 0 2140 2175 338902858 338902823 1.520000e-07 67.6
33 TraesCS2B01G521400 chr1B 100.000 36 0 0 2140 2175 338959585 338959550 1.520000e-07 67.6
34 TraesCS2B01G521400 chr1B 100.000 36 0 0 2140 2175 683723708 683723743 1.520000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G521400 chr2B 716359929 716362300 2371 False 4381 4381 100.000 1 2372 1 chr2B.!!$F3 2371
1 TraesCS2B01G521400 chr3A 66002860 66004934 2074 True 3472 3472 96.873 1 2075 1 chr3A.!!$R1 2074
2 TraesCS2B01G521400 chr5D 503262503 503264577 2074 True 3467 3467 96.825 1 2075 1 chr5D.!!$R2 2074
3 TraesCS2B01G521400 chr5D 503245471 503247542 2071 False 3456 3456 96.773 1 2072 1 chr5D.!!$F1 2071
4 TraesCS2B01G521400 chr2A 726904182 726906256 2074 True 3467 3467 96.825 1 2075 1 chr2A.!!$R1 2074
5 TraesCS2B01G521400 chr6D 389243549 389245623 2074 True 3461 3461 96.777 1 2075 1 chr6D.!!$R2 2074
6 TraesCS2B01G521400 chr3D 589261258 589263327 2069 True 3446 3446 96.721 1 2070 1 chr3D.!!$R1 2069
7 TraesCS2B01G521400 chr2D 591984808 591986879 2071 False 3439 3439 96.628 1 2072 1 chr2D.!!$F1 2071
8 TraesCS2B01G521400 chr7B 663097152 663099226 2074 True 3406 3406 96.296 1 2075 1 chr7B.!!$R1 2074
9 TraesCS2B01G521400 chr1D 459902444 459904518 2074 True 3406 3406 96.296 1 2075 1 chr1D.!!$R1 2074

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
917 920 0.250553 TTGTAAGCTGTGTTCGGGGG 60.251 55.0 0.0 0.0 0.0 5.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2193 2198 0.035439 TGGAAGGGAATCTCGGCAAC 60.035 55.0 0.0 0.0 0.0 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 1.592400 TACTTCACGGGCGAGGTCTG 61.592 60.000 0.00 0.00 0.00 3.51
106 107 2.288186 GCTGCGCTAGGGAAAAGAATAC 59.712 50.000 11.61 0.00 0.00 1.89
465 468 1.011293 TCCCTGGGGAAGAGGATCAAT 59.989 52.381 14.00 0.00 42.05 2.57
476 479 2.312741 AGAGGATCAATTTGGCCCTTGA 59.687 45.455 13.08 13.08 37.82 3.02
516 519 0.850100 TCCCTTCAACCCTTTGAGCA 59.150 50.000 0.00 0.00 42.79 4.26
598 601 0.544357 ACGAGATCACCCCAAGGACA 60.544 55.000 0.00 0.00 36.73 4.02
638 641 1.007479 ACGGACCAACCATAGACCCTA 59.993 52.381 0.00 0.00 38.90 3.53
651 654 6.044404 ACCATAGACCCTATTCAATAAGTGGG 59.956 42.308 0.00 0.00 37.20 4.61
715 718 1.734465 GAAGGGCAATCACTCGTTCTG 59.266 52.381 0.00 0.00 0.00 3.02
791 794 4.094476 CCTTCCTGGTTCTCCTGTAACTA 58.906 47.826 0.00 0.00 34.23 2.24
794 797 5.006896 TCCTGGTTCTCCTGTAACTAGAA 57.993 43.478 0.00 0.00 37.56 2.10
850 853 3.130340 TCCAACTCAGCACCTTTTGTTTC 59.870 43.478 0.00 0.00 0.00 2.78
915 918 1.878953 AGTTGTAAGCTGTGTTCGGG 58.121 50.000 0.00 0.00 0.00 5.14
916 919 0.872388 GTTGTAAGCTGTGTTCGGGG 59.128 55.000 0.00 0.00 0.00 5.73
917 920 0.250553 TTGTAAGCTGTGTTCGGGGG 60.251 55.000 0.00 0.00 0.00 5.40
1006 1009 1.796017 TACCCTATGGCGGATGTCAA 58.204 50.000 0.00 0.00 30.39 3.18
1013 1016 1.669760 GGCGGATGTCAACGGTTCA 60.670 57.895 0.00 0.00 0.00 3.18
1216 1219 1.410004 CTTGCGGTGGATACCTAGGA 58.590 55.000 17.98 0.00 45.22 2.94
1255 1258 0.713883 CGTAGCAAGCGACGAAATGT 59.286 50.000 20.37 0.00 45.38 2.71
1335 1338 0.622136 TGCCTGCTGAATCCATGAGT 59.378 50.000 0.00 0.00 0.00 3.41
1398 1401 4.441913 CCAGAGGAAAAGAAAGCAAAAGCA 60.442 41.667 0.00 0.00 0.00 3.91
1710 1713 5.697633 GGTAGTGAAATAGAACGTGAAACCA 59.302 40.000 0.00 0.00 0.00 3.67
1718 1721 1.873591 GAACGTGAAACCATGCTGAGT 59.126 47.619 0.00 0.00 0.00 3.41
1748 1751 1.075601 TGGGAGGGCAAAGTGATCTT 58.924 50.000 0.00 0.00 35.14 2.40
1762 1765 1.621317 TGATCTTTGACCACGTGCCTA 59.379 47.619 10.91 0.00 0.00 3.93
1778 1781 2.170397 TGCCTATTGAAGAATGAGCCGA 59.830 45.455 0.00 0.00 0.00 5.54
1810 1813 2.807676 CAGTGGCTTGGTTAAGGGAAT 58.192 47.619 0.00 0.00 34.40 3.01
1822 1825 3.083386 GGGAATGGAACCCACCGA 58.917 61.111 0.00 0.00 46.05 4.69
1827 1830 2.075355 AATGGAACCCACCGAAGCCA 62.075 55.000 0.00 0.00 35.80 4.75
1837 1840 0.535335 ACCGAAGCCATAGCGAAAGA 59.465 50.000 0.00 0.00 46.67 2.52
1898 1901 3.879346 ACCTGGGTGATCTATCCATGAT 58.121 45.455 0.00 0.00 0.00 2.45
1999 2002 0.953471 TGAAATGCCACTCGAACCCG 60.953 55.000 0.00 0.00 37.07 5.28
2022 2027 1.768870 GCTAGCTGGTTCTCCCCAATA 59.231 52.381 7.70 0.00 33.07 1.90
2023 2028 2.224402 GCTAGCTGGTTCTCCCCAATAG 60.224 54.545 7.70 0.00 33.07 1.73
2044 2049 2.177394 TTGAGGCGCAACAGTTGATA 57.823 45.000 17.99 0.00 0.00 2.15
2072 2077 3.649023 TCTAGGGGTAAAGCACTGTTTCA 59.351 43.478 0.00 0.00 0.00 2.69
2075 2080 2.956333 GGGGTAAAGCACTGTTTCAGTT 59.044 45.455 0.00 0.00 42.59 3.16
2076 2081 3.004419 GGGGTAAAGCACTGTTTCAGTTC 59.996 47.826 0.00 0.00 42.59 3.01
2077 2082 3.883489 GGGTAAAGCACTGTTTCAGTTCT 59.117 43.478 0.00 0.00 42.59 3.01
2078 2083 4.338400 GGGTAAAGCACTGTTTCAGTTCTT 59.662 41.667 8.47 8.47 46.35 2.52
2081 2086 4.639135 AAGCACTGTTTCAGTTCTTTCC 57.361 40.909 8.47 0.00 43.14 3.13
2082 2087 3.891049 AGCACTGTTTCAGTTCTTTCCT 58.109 40.909 0.00 0.00 42.59 3.36
2083 2088 4.273318 AGCACTGTTTCAGTTCTTTCCTT 58.727 39.130 0.00 0.00 42.59 3.36
2084 2089 4.336713 AGCACTGTTTCAGTTCTTTCCTTC 59.663 41.667 0.00 0.00 42.59 3.46
2085 2090 4.498177 GCACTGTTTCAGTTCTTTCCTTCC 60.498 45.833 0.00 0.00 42.59 3.46
2086 2091 4.884164 CACTGTTTCAGTTCTTTCCTTCCT 59.116 41.667 0.00 0.00 42.59 3.36
2087 2092 5.358160 CACTGTTTCAGTTCTTTCCTTCCTT 59.642 40.000 0.00 0.00 42.59 3.36
2088 2093 6.542370 CACTGTTTCAGTTCTTTCCTTCCTTA 59.458 38.462 0.00 0.00 42.59 2.69
2089 2094 6.542735 ACTGTTTCAGTTCTTTCCTTCCTTAC 59.457 38.462 0.00 0.00 42.59 2.34
2090 2095 6.419791 TGTTTCAGTTCTTTCCTTCCTTACA 58.580 36.000 0.00 0.00 0.00 2.41
2091 2096 6.887545 TGTTTCAGTTCTTTCCTTCCTTACAA 59.112 34.615 0.00 0.00 0.00 2.41
2092 2097 7.394923 TGTTTCAGTTCTTTCCTTCCTTACAAA 59.605 33.333 0.00 0.00 0.00 2.83
2093 2098 7.948034 TTCAGTTCTTTCCTTCCTTACAAAA 57.052 32.000 0.00 0.00 0.00 2.44
2094 2099 7.948034 TCAGTTCTTTCCTTCCTTACAAAAA 57.052 32.000 0.00 0.00 0.00 1.94
2117 2122 7.519032 AAAATTGAGTCAACTATTTTCGGGA 57.481 32.000 7.96 0.00 32.91 5.14
2118 2123 7.519032 AAATTGAGTCAACTATTTTCGGGAA 57.481 32.000 7.96 0.00 0.00 3.97
2119 2124 5.934935 TTGAGTCAACTATTTTCGGGAAC 57.065 39.130 0.08 0.00 0.00 3.62
2135 2140 3.946606 GGGAACGATGGGACTAAAAAGA 58.053 45.455 0.00 0.00 0.00 2.52
2136 2141 4.524053 GGGAACGATGGGACTAAAAAGAT 58.476 43.478 0.00 0.00 0.00 2.40
2137 2142 4.948004 GGGAACGATGGGACTAAAAAGATT 59.052 41.667 0.00 0.00 0.00 2.40
2138 2143 5.163652 GGGAACGATGGGACTAAAAAGATTG 60.164 44.000 0.00 0.00 0.00 2.67
2139 2144 5.414765 GGAACGATGGGACTAAAAAGATTGT 59.585 40.000 0.00 0.00 0.00 2.71
2140 2145 6.403309 GGAACGATGGGACTAAAAAGATTGTC 60.403 42.308 0.00 0.00 0.00 3.18
2141 2146 5.556915 ACGATGGGACTAAAAAGATTGTCA 58.443 37.500 0.00 0.00 0.00 3.58
2142 2147 6.001460 ACGATGGGACTAAAAAGATTGTCAA 58.999 36.000 0.00 0.00 0.00 3.18
2143 2148 6.659242 ACGATGGGACTAAAAAGATTGTCAAT 59.341 34.615 0.00 0.00 0.00 2.57
2144 2149 7.176690 ACGATGGGACTAAAAAGATTGTCAATT 59.823 33.333 0.00 0.00 0.00 2.32
2145 2150 8.673711 CGATGGGACTAAAAAGATTGTCAATTA 58.326 33.333 0.00 0.00 0.00 1.40
2147 2152 8.934023 TGGGACTAAAAAGATTGTCAATTAGT 57.066 30.769 7.83 7.83 36.57 2.24
2148 2153 9.010029 TGGGACTAAAAAGATTGTCAATTAGTC 57.990 33.333 19.13 19.13 44.08 2.59
2151 2156 8.934023 ACTAAAAAGATTGTCAATTAGTCCCA 57.066 30.769 0.00 0.00 30.07 4.37
2152 2157 8.793592 ACTAAAAAGATTGTCAATTAGTCCCAC 58.206 33.333 0.00 0.00 30.07 4.61
2153 2158 7.595819 AAAAAGATTGTCAATTAGTCCCACA 57.404 32.000 0.00 0.00 0.00 4.17
2154 2159 6.575162 AAAGATTGTCAATTAGTCCCACAC 57.425 37.500 0.00 0.00 0.00 3.82
2155 2160 5.505181 AGATTGTCAATTAGTCCCACACT 57.495 39.130 0.00 0.00 39.41 3.55
2156 2161 5.880901 AGATTGTCAATTAGTCCCACACTT 58.119 37.500 0.00 0.00 36.43 3.16
2157 2162 5.940470 AGATTGTCAATTAGTCCCACACTTC 59.060 40.000 0.00 0.00 36.43 3.01
2158 2163 4.015872 TGTCAATTAGTCCCACACTTCC 57.984 45.455 0.00 0.00 36.43 3.46
2159 2164 3.244770 TGTCAATTAGTCCCACACTTCCC 60.245 47.826 0.00 0.00 36.43 3.97
2160 2165 2.027561 TCAATTAGTCCCACACTTCCCG 60.028 50.000 0.00 0.00 36.43 5.14
2161 2166 0.252197 ATTAGTCCCACACTTCCCGC 59.748 55.000 0.00 0.00 36.43 6.13
2162 2167 1.122632 TTAGTCCCACACTTCCCGCA 61.123 55.000 0.00 0.00 36.43 5.69
2163 2168 1.541310 TAGTCCCACACTTCCCGCAG 61.541 60.000 0.00 0.00 36.43 5.18
2176 2181 3.303605 CGCAGGAATCGAAGAGCG 58.696 61.111 6.68 6.68 43.63 5.03
2177 2182 2.233654 CGCAGGAATCGAAGAGCGG 61.234 63.158 11.52 0.00 43.63 5.52
2178 2183 1.153549 GCAGGAATCGAAGAGCGGT 60.154 57.895 0.00 0.00 43.63 5.68
2180 2185 1.726853 CAGGAATCGAAGAGCGGTTT 58.273 50.000 0.00 0.00 44.78 3.27
2181 2186 1.661112 CAGGAATCGAAGAGCGGTTTC 59.339 52.381 0.00 0.00 44.78 2.78
2182 2187 1.007580 GGAATCGAAGAGCGGTTTCC 58.992 55.000 0.00 0.00 44.78 3.13
2183 2188 1.405661 GGAATCGAAGAGCGGTTTCCT 60.406 52.381 6.31 0.00 44.78 3.36
2184 2189 1.927838 GAATCGAAGAGCGGTTTCCTC 59.072 52.381 0.00 0.00 44.78 3.71
2185 2190 0.895530 ATCGAAGAGCGGTTTCCTCA 59.104 50.000 0.00 0.00 43.63 3.86
2186 2191 0.677288 TCGAAGAGCGGTTTCCTCAA 59.323 50.000 0.00 0.00 41.33 3.02
2187 2192 1.069513 TCGAAGAGCGGTTTCCTCAAA 59.930 47.619 0.00 0.00 41.33 2.69
2188 2193 2.076863 CGAAGAGCGGTTTCCTCAAAT 58.923 47.619 0.00 0.00 36.03 2.32
2189 2194 2.159653 CGAAGAGCGGTTTCCTCAAATG 60.160 50.000 0.00 0.00 36.03 2.32
2190 2195 2.568623 AGAGCGGTTTCCTCAAATGT 57.431 45.000 0.00 0.00 0.00 2.71
2191 2196 2.154462 AGAGCGGTTTCCTCAAATGTG 58.846 47.619 0.00 0.00 0.00 3.21
2192 2197 1.200020 GAGCGGTTTCCTCAAATGTGG 59.800 52.381 0.00 0.00 0.00 4.17
2193 2198 0.243636 GCGGTTTCCTCAAATGTGGG 59.756 55.000 1.98 0.00 0.00 4.61
2194 2199 1.616159 CGGTTTCCTCAAATGTGGGT 58.384 50.000 1.98 0.00 0.00 4.51
2195 2200 1.960689 CGGTTTCCTCAAATGTGGGTT 59.039 47.619 1.98 0.00 0.00 4.11
2196 2201 2.288152 CGGTTTCCTCAAATGTGGGTTG 60.288 50.000 1.98 0.00 0.00 3.77
2197 2202 2.547855 GGTTTCCTCAAATGTGGGTTGC 60.548 50.000 1.98 0.00 0.00 4.17
2198 2203 1.337118 TTCCTCAAATGTGGGTTGCC 58.663 50.000 1.98 0.00 0.00 4.52
2199 2204 0.893270 TCCTCAAATGTGGGTTGCCG 60.893 55.000 1.98 0.00 0.00 5.69
2200 2205 0.893270 CCTCAAATGTGGGTTGCCGA 60.893 55.000 0.00 0.00 0.00 5.54
2201 2206 0.523072 CTCAAATGTGGGTTGCCGAG 59.477 55.000 0.00 0.00 0.00 4.63
2202 2207 0.109532 TCAAATGTGGGTTGCCGAGA 59.890 50.000 0.00 0.00 0.00 4.04
2203 2208 1.176527 CAAATGTGGGTTGCCGAGAT 58.823 50.000 0.00 0.00 0.00 2.75
2204 2209 1.545582 CAAATGTGGGTTGCCGAGATT 59.454 47.619 0.00 0.00 27.41 2.40
2205 2210 1.463674 AATGTGGGTTGCCGAGATTC 58.536 50.000 0.00 0.00 0.00 2.52
2206 2211 0.394352 ATGTGGGTTGCCGAGATTCC 60.394 55.000 0.00 0.00 0.00 3.01
2207 2212 1.749258 GTGGGTTGCCGAGATTCCC 60.749 63.158 0.00 0.00 38.68 3.97
2208 2213 1.923395 TGGGTTGCCGAGATTCCCT 60.923 57.895 0.00 0.00 38.95 4.20
2209 2214 1.303282 GGGTTGCCGAGATTCCCTT 59.697 57.895 0.00 0.00 35.63 3.95
2210 2215 0.748367 GGGTTGCCGAGATTCCCTTC 60.748 60.000 0.00 0.00 35.63 3.46
2211 2216 0.748367 GGTTGCCGAGATTCCCTTCC 60.748 60.000 0.00 0.00 0.00 3.46
2212 2217 0.035439 GTTGCCGAGATTCCCTTCCA 60.035 55.000 0.00 0.00 0.00 3.53
2213 2218 0.695924 TTGCCGAGATTCCCTTCCAA 59.304 50.000 0.00 0.00 0.00 3.53
2214 2219 0.695924 TGCCGAGATTCCCTTCCAAA 59.304 50.000 0.00 0.00 0.00 3.28
2215 2220 1.095600 GCCGAGATTCCCTTCCAAAC 58.904 55.000 0.00 0.00 0.00 2.93
2216 2221 1.613255 GCCGAGATTCCCTTCCAAACA 60.613 52.381 0.00 0.00 0.00 2.83
2217 2222 2.084546 CCGAGATTCCCTTCCAAACAC 58.915 52.381 0.00 0.00 0.00 3.32
2218 2223 2.084546 CGAGATTCCCTTCCAAACACC 58.915 52.381 0.00 0.00 0.00 4.16
2219 2224 2.552155 CGAGATTCCCTTCCAAACACCA 60.552 50.000 0.00 0.00 0.00 4.17
2220 2225 3.496331 GAGATTCCCTTCCAAACACCAA 58.504 45.455 0.00 0.00 0.00 3.67
2221 2226 4.089361 GAGATTCCCTTCCAAACACCAAT 58.911 43.478 0.00 0.00 0.00 3.16
2222 2227 4.089361 AGATTCCCTTCCAAACACCAATC 58.911 43.478 0.00 0.00 0.00 2.67
2223 2228 2.302587 TCCCTTCCAAACACCAATCC 57.697 50.000 0.00 0.00 0.00 3.01
2224 2229 1.501170 TCCCTTCCAAACACCAATCCA 59.499 47.619 0.00 0.00 0.00 3.41
2225 2230 2.091055 TCCCTTCCAAACACCAATCCAA 60.091 45.455 0.00 0.00 0.00 3.53
2226 2231 2.905736 CCCTTCCAAACACCAATCCAAT 59.094 45.455 0.00 0.00 0.00 3.16
2227 2232 3.055891 CCCTTCCAAACACCAATCCAATC 60.056 47.826 0.00 0.00 0.00 2.67
2228 2233 3.834231 CCTTCCAAACACCAATCCAATCT 59.166 43.478 0.00 0.00 0.00 2.40
2229 2234 4.082026 CCTTCCAAACACCAATCCAATCTC 60.082 45.833 0.00 0.00 0.00 2.75
2230 2235 3.430453 TCCAAACACCAATCCAATCTCC 58.570 45.455 0.00 0.00 0.00 3.71
2231 2236 3.164268 CCAAACACCAATCCAATCTCCA 58.836 45.455 0.00 0.00 0.00 3.86
2232 2237 3.770933 CCAAACACCAATCCAATCTCCAT 59.229 43.478 0.00 0.00 0.00 3.41
2233 2238 4.223477 CCAAACACCAATCCAATCTCCATT 59.777 41.667 0.00 0.00 0.00 3.16
2234 2239 5.413499 CAAACACCAATCCAATCTCCATTC 58.587 41.667 0.00 0.00 0.00 2.67
2235 2240 3.635591 ACACCAATCCAATCTCCATTCC 58.364 45.455 0.00 0.00 0.00 3.01
2236 2241 3.270433 ACACCAATCCAATCTCCATTCCT 59.730 43.478 0.00 0.00 0.00 3.36
2237 2242 4.264532 ACACCAATCCAATCTCCATTCCTT 60.265 41.667 0.00 0.00 0.00 3.36
2238 2243 4.098960 CACCAATCCAATCTCCATTCCTTG 59.901 45.833 0.00 0.00 0.00 3.61
2239 2244 4.017222 ACCAATCCAATCTCCATTCCTTGA 60.017 41.667 0.00 0.00 0.00 3.02
2240 2245 5.145564 CCAATCCAATCTCCATTCCTTGAT 58.854 41.667 0.00 0.00 0.00 2.57
2241 2246 5.010719 CCAATCCAATCTCCATTCCTTGATG 59.989 44.000 0.00 0.00 0.00 3.07
2242 2247 5.658198 ATCCAATCTCCATTCCTTGATGA 57.342 39.130 0.00 0.00 0.00 2.92
2243 2248 5.045012 TCCAATCTCCATTCCTTGATGAG 57.955 43.478 0.00 0.00 0.00 2.90
2244 2249 4.723285 TCCAATCTCCATTCCTTGATGAGA 59.277 41.667 0.00 0.00 0.00 3.27
2245 2250 5.192321 TCCAATCTCCATTCCTTGATGAGAA 59.808 40.000 0.00 0.00 0.00 2.87
2246 2251 5.889853 CCAATCTCCATTCCTTGATGAGAAA 59.110 40.000 0.00 0.00 0.00 2.52
2247 2252 6.550108 CCAATCTCCATTCCTTGATGAGAAAT 59.450 38.462 0.00 0.00 0.00 2.17
2248 2253 7.426410 CAATCTCCATTCCTTGATGAGAAATG 58.574 38.462 0.00 0.00 0.00 2.32
2249 2254 6.317663 TCTCCATTCCTTGATGAGAAATGA 57.682 37.500 0.00 0.00 0.00 2.57
2250 2255 6.354938 TCTCCATTCCTTGATGAGAAATGAG 58.645 40.000 0.00 0.00 0.00 2.90
2251 2256 4.885907 TCCATTCCTTGATGAGAAATGAGC 59.114 41.667 0.00 0.00 0.00 4.26
2252 2257 4.643334 CCATTCCTTGATGAGAAATGAGCA 59.357 41.667 0.00 0.00 0.00 4.26
2253 2258 5.126545 CCATTCCTTGATGAGAAATGAGCAA 59.873 40.000 0.00 0.00 0.00 3.91
2254 2259 5.892160 TTCCTTGATGAGAAATGAGCAAG 57.108 39.130 0.00 0.00 34.18 4.01
2255 2260 5.169992 TCCTTGATGAGAAATGAGCAAGA 57.830 39.130 0.00 0.00 35.89 3.02
2256 2261 4.940046 TCCTTGATGAGAAATGAGCAAGAC 59.060 41.667 0.00 0.00 35.89 3.01
2257 2262 4.096081 CCTTGATGAGAAATGAGCAAGACC 59.904 45.833 0.00 0.00 35.89 3.85
2258 2263 4.290711 TGATGAGAAATGAGCAAGACCA 57.709 40.909 0.00 0.00 0.00 4.02
2259 2264 4.851843 TGATGAGAAATGAGCAAGACCAT 58.148 39.130 0.00 0.00 0.00 3.55
2260 2265 5.993055 TGATGAGAAATGAGCAAGACCATA 58.007 37.500 0.00 0.00 0.00 2.74
2261 2266 6.598503 TGATGAGAAATGAGCAAGACCATAT 58.401 36.000 0.00 0.00 0.00 1.78
2262 2267 6.485648 TGATGAGAAATGAGCAAGACCATATG 59.514 38.462 0.00 0.00 0.00 1.78
2263 2268 5.748402 TGAGAAATGAGCAAGACCATATGT 58.252 37.500 1.24 0.00 0.00 2.29
2264 2269 6.182627 TGAGAAATGAGCAAGACCATATGTT 58.817 36.000 1.24 0.00 0.00 2.71
2265 2270 6.660521 TGAGAAATGAGCAAGACCATATGTTT 59.339 34.615 1.24 0.00 0.00 2.83
2266 2271 7.828717 TGAGAAATGAGCAAGACCATATGTTTA 59.171 33.333 1.24 0.00 0.00 2.01
2267 2272 8.757982 AGAAATGAGCAAGACCATATGTTTAT 57.242 30.769 1.24 0.00 0.00 1.40
2268 2273 8.844244 AGAAATGAGCAAGACCATATGTTTATC 58.156 33.333 1.24 0.00 0.00 1.75
2269 2274 8.523915 AAATGAGCAAGACCATATGTTTATCA 57.476 30.769 1.24 2.76 0.00 2.15
2270 2275 8.523915 AATGAGCAAGACCATATGTTTATCAA 57.476 30.769 1.24 0.00 0.00 2.57
2271 2276 7.936496 TGAGCAAGACCATATGTTTATCAAA 57.064 32.000 1.24 0.00 0.00 2.69
2272 2277 8.347004 TGAGCAAGACCATATGTTTATCAAAA 57.653 30.769 1.24 0.00 0.00 2.44
2273 2278 8.801299 TGAGCAAGACCATATGTTTATCAAAAA 58.199 29.630 1.24 0.00 0.00 1.94
2274 2279 9.807649 GAGCAAGACCATATGTTTATCAAAAAT 57.192 29.630 1.24 0.00 0.00 1.82
2297 2302 8.507582 AATATAGGCCCTATATAAACCTAGCC 57.492 38.462 21.01 0.79 38.30 3.93
2298 2303 3.461824 AGGCCCTATATAAACCTAGCCC 58.538 50.000 0.00 0.00 40.06 5.19
2299 2304 3.080775 AGGCCCTATATAAACCTAGCCCT 59.919 47.826 0.00 0.00 40.06 5.19
2300 2305 3.850774 GGCCCTATATAAACCTAGCCCTT 59.149 47.826 0.00 0.00 32.93 3.95
2301 2306 5.034878 GGCCCTATATAAACCTAGCCCTTA 58.965 45.833 0.00 0.00 32.93 2.69
2302 2307 5.104610 GGCCCTATATAAACCTAGCCCTTAC 60.105 48.000 0.00 0.00 32.93 2.34
2303 2308 5.725338 GCCCTATATAAACCTAGCCCTTACT 59.275 44.000 0.00 0.00 0.00 2.24
2304 2309 6.899631 GCCCTATATAAACCTAGCCCTTACTA 59.100 42.308 0.00 0.00 0.00 1.82
2305 2310 7.147759 GCCCTATATAAACCTAGCCCTTACTAC 60.148 44.444 0.00 0.00 0.00 2.73
2306 2311 7.344093 CCCTATATAAACCTAGCCCTTACTACC 59.656 44.444 0.00 0.00 0.00 3.18
2307 2312 8.121185 CCTATATAAACCTAGCCCTTACTACCT 58.879 40.741 0.00 0.00 0.00 3.08
2308 2313 7.793948 ATATAAACCTAGCCCTTACTACCTG 57.206 40.000 0.00 0.00 0.00 4.00
2309 2314 3.771071 AACCTAGCCCTTACTACCTGA 57.229 47.619 0.00 0.00 0.00 3.86
2310 2315 3.771071 ACCTAGCCCTTACTACCTGAA 57.229 47.619 0.00 0.00 0.00 3.02
2311 2316 3.372897 ACCTAGCCCTTACTACCTGAAC 58.627 50.000 0.00 0.00 0.00 3.18
2312 2317 3.012616 ACCTAGCCCTTACTACCTGAACT 59.987 47.826 0.00 0.00 0.00 3.01
2313 2318 4.031611 CCTAGCCCTTACTACCTGAACTT 58.968 47.826 0.00 0.00 0.00 2.66
2314 2319 4.099727 CCTAGCCCTTACTACCTGAACTTC 59.900 50.000 0.00 0.00 0.00 3.01
2315 2320 3.792515 AGCCCTTACTACCTGAACTTCT 58.207 45.455 0.00 0.00 0.00 2.85
2316 2321 4.168883 AGCCCTTACTACCTGAACTTCTT 58.831 43.478 0.00 0.00 0.00 2.52
2317 2322 5.339477 AGCCCTTACTACCTGAACTTCTTA 58.661 41.667 0.00 0.00 0.00 2.10
2318 2323 5.187381 AGCCCTTACTACCTGAACTTCTTAC 59.813 44.000 0.00 0.00 0.00 2.34
2319 2324 5.626347 GCCCTTACTACCTGAACTTCTTACC 60.626 48.000 0.00 0.00 0.00 2.85
2320 2325 5.720520 CCCTTACTACCTGAACTTCTTACCT 59.279 44.000 0.00 0.00 0.00 3.08
2321 2326 6.212993 CCCTTACTACCTGAACTTCTTACCTT 59.787 42.308 0.00 0.00 0.00 3.50
2322 2327 7.321908 CCTTACTACCTGAACTTCTTACCTTC 58.678 42.308 0.00 0.00 0.00 3.46
2323 2328 7.039223 CCTTACTACCTGAACTTCTTACCTTCA 60.039 40.741 0.00 0.00 0.00 3.02
2324 2329 6.742559 ACTACCTGAACTTCTTACCTTCAA 57.257 37.500 0.00 0.00 0.00 2.69
2325 2330 7.133133 ACTACCTGAACTTCTTACCTTCAAA 57.867 36.000 0.00 0.00 0.00 2.69
2326 2331 7.746703 ACTACCTGAACTTCTTACCTTCAAAT 58.253 34.615 0.00 0.00 0.00 2.32
2327 2332 8.877195 ACTACCTGAACTTCTTACCTTCAAATA 58.123 33.333 0.00 0.00 0.00 1.40
2328 2333 9.720769 CTACCTGAACTTCTTACCTTCAAATAA 57.279 33.333 0.00 0.00 0.00 1.40
2329 2334 8.622948 ACCTGAACTTCTTACCTTCAAATAAG 57.377 34.615 0.00 0.00 0.00 1.73
2330 2335 8.437575 ACCTGAACTTCTTACCTTCAAATAAGA 58.562 33.333 0.00 0.00 35.98 2.10
2331 2336 8.722394 CCTGAACTTCTTACCTTCAAATAAGAC 58.278 37.037 0.00 0.00 37.19 3.01
2332 2337 9.495572 CTGAACTTCTTACCTTCAAATAAGACT 57.504 33.333 0.00 0.00 37.19 3.24
2338 2343 8.773404 TCTTACCTTCAAATAAGACTAACTGC 57.227 34.615 0.00 0.00 33.47 4.40
2339 2344 7.822822 TCTTACCTTCAAATAAGACTAACTGCC 59.177 37.037 0.00 0.00 33.47 4.85
2340 2345 5.254115 ACCTTCAAATAAGACTAACTGCCC 58.746 41.667 0.00 0.00 0.00 5.36
2341 2346 4.332819 CCTTCAAATAAGACTAACTGCCCG 59.667 45.833 0.00 0.00 0.00 6.13
2342 2347 4.811969 TCAAATAAGACTAACTGCCCGA 57.188 40.909 0.00 0.00 0.00 5.14
2343 2348 5.155278 TCAAATAAGACTAACTGCCCGAA 57.845 39.130 0.00 0.00 0.00 4.30
2344 2349 4.933400 TCAAATAAGACTAACTGCCCGAAC 59.067 41.667 0.00 0.00 0.00 3.95
2345 2350 3.538634 ATAAGACTAACTGCCCGAACC 57.461 47.619 0.00 0.00 0.00 3.62
2346 2351 1.349067 AAGACTAACTGCCCGAACCT 58.651 50.000 0.00 0.00 0.00 3.50
2347 2352 0.608640 AGACTAACTGCCCGAACCTG 59.391 55.000 0.00 0.00 0.00 4.00
2348 2353 1.003718 ACTAACTGCCCGAACCTGC 60.004 57.895 0.00 0.00 0.00 4.85
2349 2354 1.296715 CTAACTGCCCGAACCTGCT 59.703 57.895 0.00 0.00 0.00 4.24
2350 2355 0.321653 CTAACTGCCCGAACCTGCTT 60.322 55.000 0.00 0.00 0.00 3.91
2351 2356 0.605319 TAACTGCCCGAACCTGCTTG 60.605 55.000 0.00 0.00 0.00 4.01
2352 2357 3.741476 CTGCCCGAACCTGCTTGC 61.741 66.667 0.00 0.00 0.00 4.01
2353 2358 4.269523 TGCCCGAACCTGCTTGCT 62.270 61.111 0.00 0.00 0.00 3.91
2354 2359 2.985847 GCCCGAACCTGCTTGCTT 60.986 61.111 0.00 0.00 0.00 3.91
2355 2360 1.674322 GCCCGAACCTGCTTGCTTA 60.674 57.895 0.00 0.00 0.00 3.09
2356 2361 1.032114 GCCCGAACCTGCTTGCTTAT 61.032 55.000 0.00 0.00 0.00 1.73
2357 2362 1.745827 GCCCGAACCTGCTTGCTTATA 60.746 52.381 0.00 0.00 0.00 0.98
2358 2363 2.851195 CCCGAACCTGCTTGCTTATAT 58.149 47.619 0.00 0.00 0.00 0.86
2359 2364 3.214328 CCCGAACCTGCTTGCTTATATT 58.786 45.455 0.00 0.00 0.00 1.28
2360 2365 3.251004 CCCGAACCTGCTTGCTTATATTC 59.749 47.826 0.00 0.00 0.00 1.75
2361 2366 4.130118 CCGAACCTGCTTGCTTATATTCT 58.870 43.478 0.00 0.00 0.00 2.40
2362 2367 5.297547 CCGAACCTGCTTGCTTATATTCTA 58.702 41.667 0.00 0.00 0.00 2.10
2363 2368 5.177696 CCGAACCTGCTTGCTTATATTCTAC 59.822 44.000 0.00 0.00 0.00 2.59
2364 2369 5.107837 CGAACCTGCTTGCTTATATTCTACG 60.108 44.000 0.00 0.00 0.00 3.51
2365 2370 5.531122 ACCTGCTTGCTTATATTCTACGA 57.469 39.130 0.00 0.00 0.00 3.43
2366 2371 6.102897 ACCTGCTTGCTTATATTCTACGAT 57.897 37.500 0.00 0.00 0.00 3.73
2367 2372 5.928839 ACCTGCTTGCTTATATTCTACGATG 59.071 40.000 0.00 0.00 0.00 3.84
2368 2373 5.928839 CCTGCTTGCTTATATTCTACGATGT 59.071 40.000 0.00 0.00 0.00 3.06
2369 2374 7.090808 CCTGCTTGCTTATATTCTACGATGTA 58.909 38.462 0.00 0.00 0.00 2.29
2370 2375 7.598869 CCTGCTTGCTTATATTCTACGATGTAA 59.401 37.037 0.00 0.00 0.00 2.41
2371 2376 9.144747 CTGCTTGCTTATATTCTACGATGTAAT 57.855 33.333 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 62 1.826385 CCATCCTGGACTTGAACCAC 58.174 55.000 0.00 0.00 40.96 4.16
92 93 7.554118 CAGATGCTTCTTGTATTCTTTTCCCTA 59.446 37.037 0.00 0.00 0.00 3.53
106 107 5.674068 GCATGAAAGAGTCAGATGCTTCTTG 60.674 44.000 0.00 0.00 40.43 3.02
175 178 2.811431 CAACGACCCAATTGCAAGAGTA 59.189 45.455 4.94 0.00 0.00 2.59
176 179 1.608590 CAACGACCCAATTGCAAGAGT 59.391 47.619 4.94 0.00 0.00 3.24
465 468 4.735369 TCAAGTTATTCTCAAGGGCCAAA 58.265 39.130 6.18 0.00 0.00 3.28
476 479 6.328672 AGGGAGATAGTGCATCAAGTTATTCT 59.671 38.462 0.00 0.00 35.96 2.40
516 519 7.661437 GGATTTTCCTTCCTTTTGCTACATTTT 59.339 33.333 0.00 0.00 32.53 1.82
607 610 2.687566 GGTCCGTGACCCCTGGAT 60.688 66.667 10.92 0.00 46.19 3.41
625 628 7.421382 CCCACTTATTGAATAGGGTCTATGGTT 60.421 40.741 0.00 0.00 0.00 3.67
638 641 5.594317 GGCTAATGTGTCCCACTTATTGAAT 59.406 40.000 0.00 0.00 35.11 2.57
651 654 3.573491 GCGGGCGGCTAATGTGTC 61.573 66.667 9.56 0.00 39.11 3.67
715 718 8.299570 TCTTTGATCTTAAGAATGCTGGTTTTC 58.700 33.333 9.71 0.00 0.00 2.29
770 773 5.017490 TCTAGTTACAGGAGAACCAGGAAG 58.983 45.833 0.00 0.00 38.94 3.46
791 794 0.328258 CTTGTGGTTCCGGGGATTCT 59.672 55.000 0.00 0.00 0.00 2.40
794 797 0.999712 ATTCTTGTGGTTCCGGGGAT 59.000 50.000 0.00 0.00 0.00 3.85
850 853 4.928615 AGAGCAACTCTTCTCAAAATCTCG 59.071 41.667 0.00 0.00 37.60 4.04
931 934 3.511477 ACCATAGAGGCCAACGATAGAT 58.489 45.455 5.01 0.00 43.14 1.98
993 996 1.002624 AACCGTTGACATCCGCCAT 60.003 52.632 0.00 0.00 0.00 4.40
1013 1016 0.466124 GGCTGGAGATAAGCGGACTT 59.534 55.000 0.00 0.00 41.78 3.01
1216 1219 0.905337 CCCTTCCTCGTCTCTGGGTT 60.905 60.000 0.00 0.00 0.00 4.11
1255 1258 4.145807 TGCTTATTTTCAACTCCCCGAAA 58.854 39.130 0.00 0.00 0.00 3.46
1335 1338 0.324943 GCCAGGTTGTCTCTTGCCTA 59.675 55.000 0.00 0.00 0.00 3.93
1578 1581 1.349357 TGATTCACACGGGATTCCACA 59.651 47.619 4.80 0.00 0.00 4.17
1626 1629 1.672854 CGCTATCGGTCACCCAGGAA 61.673 60.000 0.00 0.00 0.00 3.36
1710 1713 0.403271 ACTGCTTGGGAACTCAGCAT 59.597 50.000 0.00 0.00 43.49 3.79
1748 1751 2.037902 TCTTCAATAGGCACGTGGTCAA 59.962 45.455 18.88 0.00 0.00 3.18
1762 1765 2.093973 AGTCGTCGGCTCATTCTTCAAT 60.094 45.455 0.00 0.00 0.00 2.57
1778 1781 0.972983 AGCCACTGCCTATGAGTCGT 60.973 55.000 0.00 0.00 38.69 4.34
1810 1813 1.202099 TATGGCTTCGGTGGGTTCCA 61.202 55.000 0.00 0.00 0.00 3.53
1822 1825 2.763448 AGACTCTCTTTCGCTATGGCTT 59.237 45.455 0.00 0.00 36.09 4.35
1827 1830 6.294843 GCCCTATTAAGACTCTCTTTCGCTAT 60.295 42.308 0.00 0.00 37.89 2.97
1837 1840 4.649674 TGACAATCGCCCTATTAAGACTCT 59.350 41.667 0.00 0.00 0.00 3.24
1898 1901 4.012374 GTTTCATCCAAGCTTCATCCTGA 58.988 43.478 0.00 0.00 0.00 3.86
1999 2002 1.691195 GGGGAGAACCAGCTAGCTCC 61.691 65.000 16.15 12.16 44.84 4.70
2044 2049 2.772515 GTGCTTTACCCCTAGATGTCCT 59.227 50.000 0.00 0.00 0.00 3.85
2092 2097 7.947282 TCCCGAAAATAGTTGACTCAATTTTT 58.053 30.769 0.00 3.01 33.03 1.94
2093 2098 7.519032 TCCCGAAAATAGTTGACTCAATTTT 57.481 32.000 0.00 4.95 34.98 1.82
2094 2099 7.368059 GTTCCCGAAAATAGTTGACTCAATTT 58.632 34.615 0.00 0.00 0.00 1.82
2095 2100 6.348213 CGTTCCCGAAAATAGTTGACTCAATT 60.348 38.462 0.00 0.00 35.63 2.32
2096 2101 5.121768 CGTTCCCGAAAATAGTTGACTCAAT 59.878 40.000 0.00 0.00 35.63 2.57
2097 2102 4.449743 CGTTCCCGAAAATAGTTGACTCAA 59.550 41.667 0.00 0.00 35.63 3.02
2098 2103 3.991773 CGTTCCCGAAAATAGTTGACTCA 59.008 43.478 0.00 0.00 35.63 3.41
2099 2104 4.240096 TCGTTCCCGAAAATAGTTGACTC 58.760 43.478 0.00 0.00 40.86 3.36
2100 2105 4.261578 TCGTTCCCGAAAATAGTTGACT 57.738 40.909 0.00 0.00 40.86 3.41
2113 2118 2.389962 TTTTAGTCCCATCGTTCCCG 57.610 50.000 0.00 0.00 0.00 5.14
2114 2119 3.946606 TCTTTTTAGTCCCATCGTTCCC 58.053 45.455 0.00 0.00 0.00 3.97
2115 2120 5.414765 ACAATCTTTTTAGTCCCATCGTTCC 59.585 40.000 0.00 0.00 0.00 3.62
2116 2121 6.148811 TGACAATCTTTTTAGTCCCATCGTTC 59.851 38.462 0.00 0.00 0.00 3.95
2117 2122 6.001460 TGACAATCTTTTTAGTCCCATCGTT 58.999 36.000 0.00 0.00 0.00 3.85
2118 2123 5.556915 TGACAATCTTTTTAGTCCCATCGT 58.443 37.500 0.00 0.00 0.00 3.73
2119 2124 6.494893 TTGACAATCTTTTTAGTCCCATCG 57.505 37.500 0.00 0.00 0.00 3.84
2121 2126 9.533831 ACTAATTGACAATCTTTTTAGTCCCAT 57.466 29.630 0.05 0.00 0.00 4.00
2122 2127 8.934023 ACTAATTGACAATCTTTTTAGTCCCA 57.066 30.769 0.05 0.00 0.00 4.37
2125 2130 9.010029 TGGGACTAATTGACAATCTTTTTAGTC 57.990 33.333 20.60 20.60 42.10 2.59
2126 2131 8.793592 GTGGGACTAATTGACAATCTTTTTAGT 58.206 33.333 9.76 9.76 33.77 2.24
2127 2132 8.792633 TGTGGGACTAATTGACAATCTTTTTAG 58.207 33.333 0.05 2.88 0.00 1.85
2128 2133 8.573035 GTGTGGGACTAATTGACAATCTTTTTA 58.427 33.333 0.05 0.00 0.00 1.52
2129 2134 7.287696 AGTGTGGGACTAATTGACAATCTTTTT 59.712 33.333 0.05 0.00 30.86 1.94
2130 2135 6.777580 AGTGTGGGACTAATTGACAATCTTTT 59.222 34.615 0.05 0.00 30.86 2.27
2131 2136 6.306987 AGTGTGGGACTAATTGACAATCTTT 58.693 36.000 0.05 0.00 30.86 2.52
2132 2137 5.880901 AGTGTGGGACTAATTGACAATCTT 58.119 37.500 0.05 0.00 30.86 2.40
2133 2138 5.505181 AGTGTGGGACTAATTGACAATCT 57.495 39.130 0.05 0.00 30.86 2.40
2134 2139 5.123979 GGAAGTGTGGGACTAATTGACAATC 59.876 44.000 0.05 0.00 33.09 2.67
2135 2140 5.010282 GGAAGTGTGGGACTAATTGACAAT 58.990 41.667 0.00 0.00 33.09 2.71
2136 2141 4.394729 GGAAGTGTGGGACTAATTGACAA 58.605 43.478 0.00 0.00 33.09 3.18
2137 2142 3.244770 GGGAAGTGTGGGACTAATTGACA 60.245 47.826 0.00 0.00 33.09 3.58
2138 2143 3.344515 GGGAAGTGTGGGACTAATTGAC 58.655 50.000 0.00 0.00 33.09 3.18
2139 2144 2.027561 CGGGAAGTGTGGGACTAATTGA 60.028 50.000 0.00 0.00 33.09 2.57
2140 2145 2.356135 CGGGAAGTGTGGGACTAATTG 58.644 52.381 0.00 0.00 33.09 2.32
2141 2146 1.339727 GCGGGAAGTGTGGGACTAATT 60.340 52.381 0.00 0.00 33.09 1.40
2142 2147 0.252197 GCGGGAAGTGTGGGACTAAT 59.748 55.000 0.00 0.00 33.09 1.73
2143 2148 1.122632 TGCGGGAAGTGTGGGACTAA 61.123 55.000 0.00 0.00 33.09 2.24
2144 2149 1.534476 TGCGGGAAGTGTGGGACTA 60.534 57.895 0.00 0.00 33.09 2.59
2145 2150 2.847234 TGCGGGAAGTGTGGGACT 60.847 61.111 0.00 0.00 35.94 3.85
2146 2151 2.358737 CTGCGGGAAGTGTGGGAC 60.359 66.667 0.00 0.00 0.00 4.46
2147 2152 3.636231 CCTGCGGGAAGTGTGGGA 61.636 66.667 5.28 0.00 33.58 4.37
2148 2153 3.190738 TTCCTGCGGGAAGTGTGGG 62.191 63.158 23.60 0.00 45.72 4.61
2149 2154 2.429930 TTCCTGCGGGAAGTGTGG 59.570 61.111 23.60 0.00 45.72 4.17
2156 2161 1.816537 CTCTTCGATTCCTGCGGGA 59.183 57.895 11.27 11.27 40.36 5.14
2157 2162 1.884926 GCTCTTCGATTCCTGCGGG 60.885 63.158 4.71 4.71 0.00 6.13
2158 2163 2.233654 CGCTCTTCGATTCCTGCGG 61.234 63.158 9.71 0.00 41.67 5.69
2159 2164 2.233654 CCGCTCTTCGATTCCTGCG 61.234 63.158 10.34 10.34 41.67 5.18
2160 2165 0.741221 AACCGCTCTTCGATTCCTGC 60.741 55.000 0.00 0.00 41.67 4.85
2161 2166 1.661112 GAAACCGCTCTTCGATTCCTG 59.339 52.381 0.00 0.00 41.67 3.86
2162 2167 1.405661 GGAAACCGCTCTTCGATTCCT 60.406 52.381 3.46 0.00 43.91 3.36
2163 2168 1.007580 GGAAACCGCTCTTCGATTCC 58.992 55.000 0.00 0.00 42.37 3.01
2164 2169 1.927838 GAGGAAACCGCTCTTCGATTC 59.072 52.381 0.00 0.00 41.67 2.52
2165 2170 1.275291 TGAGGAAACCGCTCTTCGATT 59.725 47.619 0.00 0.00 41.67 3.34
2166 2171 0.895530 TGAGGAAACCGCTCTTCGAT 59.104 50.000 0.00 0.00 41.67 3.59
2167 2172 0.677288 TTGAGGAAACCGCTCTTCGA 59.323 50.000 0.00 0.00 41.67 3.71
2168 2173 1.508632 TTTGAGGAAACCGCTCTTCG 58.491 50.000 0.00 0.00 38.08 3.79
2169 2174 2.814336 ACATTTGAGGAAACCGCTCTTC 59.186 45.455 0.00 0.00 0.00 2.87
2170 2175 2.554032 CACATTTGAGGAAACCGCTCTT 59.446 45.455 0.00 0.00 0.00 2.85
2171 2176 2.154462 CACATTTGAGGAAACCGCTCT 58.846 47.619 0.00 0.00 0.00 4.09
2172 2177 1.200020 CCACATTTGAGGAAACCGCTC 59.800 52.381 0.00 0.00 0.00 5.03
2173 2178 1.247567 CCACATTTGAGGAAACCGCT 58.752 50.000 0.00 0.00 0.00 5.52
2174 2179 0.243636 CCCACATTTGAGGAAACCGC 59.756 55.000 0.00 0.00 0.00 5.68
2175 2180 1.616159 ACCCACATTTGAGGAAACCG 58.384 50.000 0.00 0.00 0.00 4.44
2176 2181 2.547855 GCAACCCACATTTGAGGAAACC 60.548 50.000 0.00 0.00 0.00 3.27
2177 2182 2.547855 GGCAACCCACATTTGAGGAAAC 60.548 50.000 0.00 0.00 0.00 2.78
2178 2183 1.691434 GGCAACCCACATTTGAGGAAA 59.309 47.619 0.00 0.00 0.00 3.13
2179 2184 1.337118 GGCAACCCACATTTGAGGAA 58.663 50.000 0.00 0.00 0.00 3.36
2180 2185 0.893270 CGGCAACCCACATTTGAGGA 60.893 55.000 0.00 0.00 0.00 3.71
2181 2186 0.893270 TCGGCAACCCACATTTGAGG 60.893 55.000 0.00 0.00 0.00 3.86
2182 2187 0.523072 CTCGGCAACCCACATTTGAG 59.477 55.000 0.00 0.00 0.00 3.02
2183 2188 0.109532 TCTCGGCAACCCACATTTGA 59.890 50.000 0.00 0.00 0.00 2.69
2184 2189 1.176527 ATCTCGGCAACCCACATTTG 58.823 50.000 0.00 0.00 0.00 2.32
2185 2190 1.818674 GAATCTCGGCAACCCACATTT 59.181 47.619 0.00 0.00 0.00 2.32
2186 2191 1.463674 GAATCTCGGCAACCCACATT 58.536 50.000 0.00 0.00 0.00 2.71
2187 2192 0.394352 GGAATCTCGGCAACCCACAT 60.394 55.000 0.00 0.00 0.00 3.21
2188 2193 1.002624 GGAATCTCGGCAACCCACA 60.003 57.895 0.00 0.00 0.00 4.17
2189 2194 1.749258 GGGAATCTCGGCAACCCAC 60.749 63.158 0.00 0.00 40.20 4.61
2190 2195 1.497309 AAGGGAATCTCGGCAACCCA 61.497 55.000 0.00 0.00 42.62 4.51
2191 2196 0.748367 GAAGGGAATCTCGGCAACCC 60.748 60.000 0.00 0.00 40.71 4.11
2192 2197 0.748367 GGAAGGGAATCTCGGCAACC 60.748 60.000 0.00 0.00 0.00 3.77
2193 2198 0.035439 TGGAAGGGAATCTCGGCAAC 60.035 55.000 0.00 0.00 0.00 4.17
2194 2199 0.695924 TTGGAAGGGAATCTCGGCAA 59.304 50.000 0.00 0.00 0.00 4.52
2195 2200 0.695924 TTTGGAAGGGAATCTCGGCA 59.304 50.000 0.00 0.00 0.00 5.69
2196 2201 1.095600 GTTTGGAAGGGAATCTCGGC 58.904 55.000 0.00 0.00 0.00 5.54
2197 2202 2.084546 GTGTTTGGAAGGGAATCTCGG 58.915 52.381 0.00 0.00 0.00 4.63
2198 2203 2.084546 GGTGTTTGGAAGGGAATCTCG 58.915 52.381 0.00 0.00 0.00 4.04
2199 2204 3.154827 TGGTGTTTGGAAGGGAATCTC 57.845 47.619 0.00 0.00 0.00 2.75
2200 2205 3.611025 TTGGTGTTTGGAAGGGAATCT 57.389 42.857 0.00 0.00 0.00 2.40
2201 2206 3.195610 GGATTGGTGTTTGGAAGGGAATC 59.804 47.826 0.00 0.00 0.00 2.52
2202 2207 3.173151 GGATTGGTGTTTGGAAGGGAAT 58.827 45.455 0.00 0.00 0.00 3.01
2203 2208 2.091055 TGGATTGGTGTTTGGAAGGGAA 60.091 45.455 0.00 0.00 0.00 3.97
2204 2209 1.501170 TGGATTGGTGTTTGGAAGGGA 59.499 47.619 0.00 0.00 0.00 4.20
2205 2210 2.008242 TGGATTGGTGTTTGGAAGGG 57.992 50.000 0.00 0.00 0.00 3.95
2206 2211 3.834231 AGATTGGATTGGTGTTTGGAAGG 59.166 43.478 0.00 0.00 0.00 3.46
2207 2212 4.082026 GGAGATTGGATTGGTGTTTGGAAG 60.082 45.833 0.00 0.00 0.00 3.46
2208 2213 3.831911 GGAGATTGGATTGGTGTTTGGAA 59.168 43.478 0.00 0.00 0.00 3.53
2209 2214 3.181424 TGGAGATTGGATTGGTGTTTGGA 60.181 43.478 0.00 0.00 0.00 3.53
2210 2215 3.164268 TGGAGATTGGATTGGTGTTTGG 58.836 45.455 0.00 0.00 0.00 3.28
2211 2216 5.410355 AATGGAGATTGGATTGGTGTTTG 57.590 39.130 0.00 0.00 0.00 2.93
2212 2217 4.467438 GGAATGGAGATTGGATTGGTGTTT 59.533 41.667 0.00 0.00 0.00 2.83
2213 2218 4.026052 GGAATGGAGATTGGATTGGTGTT 58.974 43.478 0.00 0.00 0.00 3.32
2214 2219 3.270433 AGGAATGGAGATTGGATTGGTGT 59.730 43.478 0.00 0.00 0.00 4.16
2215 2220 3.907221 AGGAATGGAGATTGGATTGGTG 58.093 45.455 0.00 0.00 0.00 4.17
2216 2221 4.017222 TCAAGGAATGGAGATTGGATTGGT 60.017 41.667 0.00 0.00 0.00 3.67
2217 2222 4.539726 TCAAGGAATGGAGATTGGATTGG 58.460 43.478 0.00 0.00 0.00 3.16
2218 2223 5.831525 TCATCAAGGAATGGAGATTGGATTG 59.168 40.000 0.00 0.00 0.00 2.67
2219 2224 6.022107 TCATCAAGGAATGGAGATTGGATT 57.978 37.500 0.00 0.00 0.00 3.01
2220 2225 5.371769 TCTCATCAAGGAATGGAGATTGGAT 59.628 40.000 0.00 0.00 0.00 3.41
2221 2226 4.723285 TCTCATCAAGGAATGGAGATTGGA 59.277 41.667 0.00 0.00 0.00 3.53
2222 2227 5.045012 TCTCATCAAGGAATGGAGATTGG 57.955 43.478 0.00 0.00 0.00 3.16
2223 2228 7.426410 CATTTCTCATCAAGGAATGGAGATTG 58.574 38.462 0.00 0.00 44.40 2.67
2224 2229 7.584122 CATTTCTCATCAAGGAATGGAGATT 57.416 36.000 0.00 0.00 44.40 2.40
2231 2236 6.095160 GTCTTGCTCATTTCTCATCAAGGAAT 59.905 38.462 0.00 0.00 33.02 3.01
2232 2237 5.413833 GTCTTGCTCATTTCTCATCAAGGAA 59.586 40.000 0.00 0.00 33.68 3.36
2233 2238 4.940046 GTCTTGCTCATTTCTCATCAAGGA 59.060 41.667 0.00 0.00 33.68 3.36
2234 2239 4.096081 GGTCTTGCTCATTTCTCATCAAGG 59.904 45.833 0.00 0.00 33.68 3.61
2235 2240 4.698780 TGGTCTTGCTCATTTCTCATCAAG 59.301 41.667 0.00 0.00 34.04 3.02
2236 2241 4.654915 TGGTCTTGCTCATTTCTCATCAA 58.345 39.130 0.00 0.00 0.00 2.57
2237 2242 4.290711 TGGTCTTGCTCATTTCTCATCA 57.709 40.909 0.00 0.00 0.00 3.07
2238 2243 6.485984 ACATATGGTCTTGCTCATTTCTCATC 59.514 38.462 7.80 0.00 0.00 2.92
2239 2244 6.363065 ACATATGGTCTTGCTCATTTCTCAT 58.637 36.000 7.80 0.00 0.00 2.90
2240 2245 5.748402 ACATATGGTCTTGCTCATTTCTCA 58.252 37.500 7.80 0.00 0.00 3.27
2241 2246 6.690194 AACATATGGTCTTGCTCATTTCTC 57.310 37.500 7.80 0.00 0.00 2.87
2242 2247 8.757982 ATAAACATATGGTCTTGCTCATTTCT 57.242 30.769 7.80 0.00 0.00 2.52
2243 2248 8.623903 TGATAAACATATGGTCTTGCTCATTTC 58.376 33.333 7.80 0.00 0.00 2.17
2244 2249 8.523915 TGATAAACATATGGTCTTGCTCATTT 57.476 30.769 7.80 0.00 0.00 2.32
2245 2250 8.523915 TTGATAAACATATGGTCTTGCTCATT 57.476 30.769 7.80 0.00 0.00 2.57
2246 2251 8.523915 TTTGATAAACATATGGTCTTGCTCAT 57.476 30.769 7.80 0.00 0.00 2.90
2247 2252 7.936496 TTTGATAAACATATGGTCTTGCTCA 57.064 32.000 7.80 0.00 0.00 4.26
2248 2253 9.807649 ATTTTTGATAAACATATGGTCTTGCTC 57.192 29.630 7.80 0.00 0.00 4.26
2271 2276 8.946248 GGCTAGGTTTATATAGGGCCTATATTT 58.054 37.037 38.05 24.99 39.47 1.40
2272 2277 7.516557 GGGCTAGGTTTATATAGGGCCTATATT 59.483 40.741 38.05 26.54 39.47 1.28
2273 2278 7.023744 GGGCTAGGTTTATATAGGGCCTATAT 58.976 42.308 36.17 36.17 41.06 0.86
2274 2279 6.165314 AGGGCTAGGTTTATATAGGGCCTATA 59.835 42.308 30.31 30.31 44.43 1.31
2275 2280 5.041758 AGGGCTAGGTTTATATAGGGCCTAT 60.042 44.000 28.12 28.12 44.43 2.57
2276 2281 4.299568 AGGGCTAGGTTTATATAGGGCCTA 59.700 45.833 17.16 17.16 44.43 3.93
2277 2282 3.080775 AGGGCTAGGTTTATATAGGGCCT 59.919 47.826 12.58 12.58 42.13 5.19
2278 2283 3.461824 AGGGCTAGGTTTATATAGGGCC 58.538 50.000 0.00 0.00 38.05 5.80
2279 2284 5.725338 AGTAAGGGCTAGGTTTATATAGGGC 59.275 44.000 0.00 0.00 0.00 5.19
2280 2285 7.344093 GGTAGTAAGGGCTAGGTTTATATAGGG 59.656 44.444 0.00 0.00 0.00 3.53
2281 2286 8.121185 AGGTAGTAAGGGCTAGGTTTATATAGG 58.879 40.741 0.00 0.00 0.00 2.57
2282 2287 8.968969 CAGGTAGTAAGGGCTAGGTTTATATAG 58.031 40.741 0.00 0.00 0.00 1.31
2283 2288 8.681584 TCAGGTAGTAAGGGCTAGGTTTATATA 58.318 37.037 0.00 0.00 0.00 0.86
2284 2289 7.541967 TCAGGTAGTAAGGGCTAGGTTTATAT 58.458 38.462 0.00 0.00 0.00 0.86
2285 2290 6.925934 TCAGGTAGTAAGGGCTAGGTTTATA 58.074 40.000 0.00 0.00 0.00 0.98
2286 2291 5.785123 TCAGGTAGTAAGGGCTAGGTTTAT 58.215 41.667 0.00 0.00 0.00 1.40
2287 2292 5.211078 TCAGGTAGTAAGGGCTAGGTTTA 57.789 43.478 0.00 0.00 0.00 2.01
2288 2293 4.070681 TCAGGTAGTAAGGGCTAGGTTT 57.929 45.455 0.00 0.00 0.00 3.27
2289 2294 3.771071 TCAGGTAGTAAGGGCTAGGTT 57.229 47.619 0.00 0.00 0.00 3.50
2290 2295 3.012616 AGTTCAGGTAGTAAGGGCTAGGT 59.987 47.826 0.00 0.00 0.00 3.08
2291 2296 3.644335 AGTTCAGGTAGTAAGGGCTAGG 58.356 50.000 0.00 0.00 0.00 3.02
2292 2297 4.957327 AGAAGTTCAGGTAGTAAGGGCTAG 59.043 45.833 5.50 0.00 0.00 3.42
2293 2298 4.944177 AGAAGTTCAGGTAGTAAGGGCTA 58.056 43.478 5.50 0.00 0.00 3.93
2294 2299 3.792515 AGAAGTTCAGGTAGTAAGGGCT 58.207 45.455 5.50 0.00 0.00 5.19
2295 2300 4.554960 AAGAAGTTCAGGTAGTAAGGGC 57.445 45.455 5.50 0.00 0.00 5.19
2296 2301 5.720520 AGGTAAGAAGTTCAGGTAGTAAGGG 59.279 44.000 5.50 0.00 0.00 3.95
2297 2302 6.854091 AGGTAAGAAGTTCAGGTAGTAAGG 57.146 41.667 5.50 0.00 0.00 2.69
2298 2303 7.893658 TGAAGGTAAGAAGTTCAGGTAGTAAG 58.106 38.462 5.50 0.00 0.00 2.34
2299 2304 7.844493 TGAAGGTAAGAAGTTCAGGTAGTAA 57.156 36.000 5.50 0.00 0.00 2.24
2300 2305 7.844493 TTGAAGGTAAGAAGTTCAGGTAGTA 57.156 36.000 5.50 0.00 32.00 1.82
2301 2306 6.742559 TTGAAGGTAAGAAGTTCAGGTAGT 57.257 37.500 5.50 0.00 32.00 2.73
2302 2307 9.720769 TTATTTGAAGGTAAGAAGTTCAGGTAG 57.279 33.333 5.50 0.00 32.00 3.18
2303 2308 9.720769 CTTATTTGAAGGTAAGAAGTTCAGGTA 57.279 33.333 5.50 0.00 32.00 3.08
2304 2309 8.437575 TCTTATTTGAAGGTAAGAAGTTCAGGT 58.562 33.333 5.50 0.00 34.84 4.00
2305 2310 8.722394 GTCTTATTTGAAGGTAAGAAGTTCAGG 58.278 37.037 5.50 0.00 38.32 3.86
2306 2311 9.495572 AGTCTTATTTGAAGGTAAGAAGTTCAG 57.504 33.333 5.50 0.00 38.32 3.02
2312 2317 9.216117 GCAGTTAGTCTTATTTGAAGGTAAGAA 57.784 33.333 4.42 0.00 38.32 2.52
2313 2318 7.822822 GGCAGTTAGTCTTATTTGAAGGTAAGA 59.177 37.037 0.00 0.00 35.25 2.10
2314 2319 7.065923 GGGCAGTTAGTCTTATTTGAAGGTAAG 59.934 40.741 0.00 0.00 0.00 2.34
2315 2320 6.882678 GGGCAGTTAGTCTTATTTGAAGGTAA 59.117 38.462 0.00 0.00 0.00 2.85
2316 2321 6.412214 GGGCAGTTAGTCTTATTTGAAGGTA 58.588 40.000 0.00 0.00 0.00 3.08
2317 2322 5.254115 GGGCAGTTAGTCTTATTTGAAGGT 58.746 41.667 0.00 0.00 0.00 3.50
2318 2323 4.332819 CGGGCAGTTAGTCTTATTTGAAGG 59.667 45.833 0.00 0.00 0.00 3.46
2319 2324 5.175859 TCGGGCAGTTAGTCTTATTTGAAG 58.824 41.667 0.00 0.00 0.00 3.02
2320 2325 5.155278 TCGGGCAGTTAGTCTTATTTGAA 57.845 39.130 0.00 0.00 0.00 2.69
2321 2326 4.811969 TCGGGCAGTTAGTCTTATTTGA 57.188 40.909 0.00 0.00 0.00 2.69
2322 2327 4.094442 GGTTCGGGCAGTTAGTCTTATTTG 59.906 45.833 0.00 0.00 0.00 2.32
2323 2328 4.019591 AGGTTCGGGCAGTTAGTCTTATTT 60.020 41.667 0.00 0.00 0.00 1.40
2324 2329 3.518303 AGGTTCGGGCAGTTAGTCTTATT 59.482 43.478 0.00 0.00 0.00 1.40
2325 2330 3.105283 AGGTTCGGGCAGTTAGTCTTAT 58.895 45.455 0.00 0.00 0.00 1.73
2326 2331 2.232941 CAGGTTCGGGCAGTTAGTCTTA 59.767 50.000 0.00 0.00 0.00 2.10
2327 2332 1.002087 CAGGTTCGGGCAGTTAGTCTT 59.998 52.381 0.00 0.00 0.00 3.01
2328 2333 0.608640 CAGGTTCGGGCAGTTAGTCT 59.391 55.000 0.00 0.00 0.00 3.24
2329 2334 1.019805 GCAGGTTCGGGCAGTTAGTC 61.020 60.000 0.00 0.00 0.00 2.59
2330 2335 1.003718 GCAGGTTCGGGCAGTTAGT 60.004 57.895 0.00 0.00 0.00 2.24
2331 2336 0.321653 AAGCAGGTTCGGGCAGTTAG 60.322 55.000 0.00 0.00 0.00 2.34
2332 2337 0.605319 CAAGCAGGTTCGGGCAGTTA 60.605 55.000 0.00 0.00 0.00 2.24
2333 2338 1.898574 CAAGCAGGTTCGGGCAGTT 60.899 57.895 0.00 0.00 0.00 3.16
2334 2339 2.281761 CAAGCAGGTTCGGGCAGT 60.282 61.111 0.00 0.00 0.00 4.40
2335 2340 3.741476 GCAAGCAGGTTCGGGCAG 61.741 66.667 0.00 0.00 0.00 4.85
2336 2341 2.404566 TAAGCAAGCAGGTTCGGGCA 62.405 55.000 0.00 0.00 39.08 5.36
2337 2342 1.032114 ATAAGCAAGCAGGTTCGGGC 61.032 55.000 0.00 0.00 39.08 6.13
2338 2343 2.325583 TATAAGCAAGCAGGTTCGGG 57.674 50.000 0.00 0.00 39.08 5.14
2339 2344 4.130118 AGAATATAAGCAAGCAGGTTCGG 58.870 43.478 0.00 0.00 39.08 4.30
2340 2345 5.107837 CGTAGAATATAAGCAAGCAGGTTCG 60.108 44.000 0.00 0.00 39.08 3.95
2341 2346 5.983720 TCGTAGAATATAAGCAAGCAGGTTC 59.016 40.000 0.00 0.00 39.08 3.62
2342 2347 5.914033 TCGTAGAATATAAGCAAGCAGGTT 58.086 37.500 0.00 0.00 41.60 3.50
2343 2348 5.531122 TCGTAGAATATAAGCAAGCAGGT 57.469 39.130 0.00 0.00 0.00 4.00
2344 2349 5.928839 ACATCGTAGAATATAAGCAAGCAGG 59.071 40.000 0.00 0.00 43.58 4.85
2345 2350 8.520835 TTACATCGTAGAATATAAGCAAGCAG 57.479 34.615 0.00 0.00 43.58 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.