Multiple sequence alignment - TraesCS2B01G512500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G512500 chr2B 100.000 2772 0 0 1 2772 707981241 707984012 0.000000e+00 5120
1 TraesCS2B01G512500 chr2B 90.104 192 19 0 513 704 184486720 184486911 1.650000e-62 250
2 TraesCS2B01G512500 chr2D 93.294 1014 64 2 716 1728 586362777 586363787 0.000000e+00 1493
3 TraesCS2B01G512500 chr2D 90.647 417 37 1 1 417 490121183 490120769 1.120000e-153 553
4 TraesCS2B01G512500 chr2D 90.123 405 34 6 1768 2166 586364489 586364893 3.160000e-144 521
5 TraesCS2B01G512500 chr2D 81.553 412 51 10 2364 2772 586364892 586365281 1.600000e-82 316
6 TraesCS2B01G512500 chr2D 74.744 293 65 7 1161 1447 561931458 561931169 3.750000e-24 122
7 TraesCS2B01G512500 chr2A 91.479 1021 77 3 719 1737 721442607 721443619 0.000000e+00 1395
8 TraesCS2B01G512500 chr2A 83.766 1041 115 33 1768 2768 721444696 721445722 0.000000e+00 937
9 TraesCS2B01G512500 chr5B 84.033 977 143 7 774 1744 477987830 477988799 0.000000e+00 928
10 TraesCS2B01G512500 chr5B 89.487 390 36 3 29 418 543284201 543283817 3.210000e-134 488
11 TraesCS2B01G512500 chr5D 82.720 978 153 10 774 1744 397997254 397998222 0.000000e+00 856
12 TraesCS2B01G512500 chr5D 90.732 205 18 1 513 717 457650058 457650261 3.520000e-69 272
13 TraesCS2B01G512500 chr5D 86.058 208 23 5 514 716 521117069 521117275 4.650000e-53 219
14 TraesCS2B01G512500 chr6D 93.285 417 28 0 1 417 388953488 388953072 1.410000e-172 616
15 TraesCS2B01G512500 chr6D 79.866 745 131 13 849 1583 25952521 25953256 6.800000e-146 527
16 TraesCS2B01G512500 chr6D 89.330 403 37 4 26 424 27145471 27145071 4.120000e-138 501
17 TraesCS2B01G512500 chr6D 90.515 369 35 0 49 417 1409362 1409730 3.210000e-134 488
18 TraesCS2B01G512500 chr6D 89.163 203 19 3 516 716 333375828 333376029 1.650000e-62 250
19 TraesCS2B01G512500 chr4D 90.647 417 38 1 2 418 64706286 64706701 1.120000e-153 553
20 TraesCS2B01G512500 chr7B 90.024 411 40 1 1 411 34663578 34663987 5.260000e-147 531
21 TraesCS2B01G512500 chr6B 77.939 757 129 21 888 1620 42422955 42423697 3.280000e-119 438
22 TraesCS2B01G512500 chr1D 85.749 414 48 10 9 417 128471699 128471292 7.090000e-116 427
23 TraesCS2B01G512500 chr1D 89.216 204 22 0 514 717 4338297 4338500 3.540000e-64 255
24 TraesCS2B01G512500 chr3A 85.071 422 55 6 2 418 333324505 333324923 9.180000e-115 424
25 TraesCS2B01G512500 chr3A 87.685 203 21 4 516 716 701663899 701663699 1.660000e-57 233
26 TraesCS2B01G512500 chr7D 91.667 204 17 0 513 716 20492265 20492062 1.630000e-72 283
27 TraesCS2B01G512500 chr3B 89.423 208 20 2 514 720 660980636 660980842 7.610000e-66 261
28 TraesCS2B01G512500 chr1A 89.175 194 20 1 514 707 252276200 252276008 9.920000e-60 241


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G512500 chr2B 707981241 707984012 2771 False 5120.000000 5120 100.000000 1 2772 1 chr2B.!!$F2 2771
1 TraesCS2B01G512500 chr2D 586362777 586365281 2504 False 776.666667 1493 88.323333 716 2772 3 chr2D.!!$F1 2056
2 TraesCS2B01G512500 chr2A 721442607 721445722 3115 False 1166.000000 1395 87.622500 719 2768 2 chr2A.!!$F1 2049
3 TraesCS2B01G512500 chr5B 477987830 477988799 969 False 928.000000 928 84.033000 774 1744 1 chr5B.!!$F1 970
4 TraesCS2B01G512500 chr5D 397997254 397998222 968 False 856.000000 856 82.720000 774 1744 1 chr5D.!!$F1 970
5 TraesCS2B01G512500 chr6D 25952521 25953256 735 False 527.000000 527 79.866000 849 1583 1 chr6D.!!$F2 734
6 TraesCS2B01G512500 chr6B 42422955 42423697 742 False 438.000000 438 77.939000 888 1620 1 chr6B.!!$F1 732

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
694 695 0.03779 GATGCAGAGGCCGAGGATAC 60.038 60.0 0.0 0.0 40.13 2.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2322 3517 0.317269 CAACAACCGCTCAGCTTGTG 60.317 55.0 5.11 0.0 0.0 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.953775 CCAGGGGCGGTGAGTGTT 61.954 66.667 0.00 0.00 0.00 3.32
21 22 2.669569 CAGGGGCGGTGAGTGTTG 60.670 66.667 0.00 0.00 0.00 3.33
22 23 3.953775 AGGGGCGGTGAGTGTTGG 61.954 66.667 0.00 0.00 0.00 3.77
29 30 4.265056 GTGAGTGTTGGCCGGGGT 62.265 66.667 2.18 0.00 0.00 4.95
30 31 4.263572 TGAGTGTTGGCCGGGGTG 62.264 66.667 2.18 0.00 0.00 4.61
31 32 3.948719 GAGTGTTGGCCGGGGTGA 61.949 66.667 2.18 0.00 0.00 4.02
32 33 3.485346 GAGTGTTGGCCGGGGTGAA 62.485 63.158 2.18 0.00 0.00 3.18
33 34 2.519780 GTGTTGGCCGGGGTGAAA 60.520 61.111 2.18 0.00 0.00 2.69
34 35 2.128507 GTGTTGGCCGGGGTGAAAA 61.129 57.895 2.18 0.00 0.00 2.29
35 36 2.128507 TGTTGGCCGGGGTGAAAAC 61.129 57.895 2.18 0.00 0.00 2.43
36 37 2.522193 TTGGCCGGGGTGAAAACC 60.522 61.111 2.18 0.00 0.00 3.27
37 38 3.375443 TTGGCCGGGGTGAAAACCA 62.375 57.895 2.18 0.00 0.00 3.67
38 39 2.989253 GGCCGGGGTGAAAACCAG 60.989 66.667 2.18 0.00 0.00 4.00
39 40 2.203437 GCCGGGGTGAAAACCAGT 60.203 61.111 2.18 0.00 0.00 4.00
40 41 1.830847 GCCGGGGTGAAAACCAGTT 60.831 57.895 2.18 0.00 0.00 3.16
41 42 1.802337 GCCGGGGTGAAAACCAGTTC 61.802 60.000 2.18 0.00 0.00 3.01
42 43 0.179001 CCGGGGTGAAAACCAGTTCT 60.179 55.000 0.00 0.00 0.00 3.01
43 44 0.951558 CGGGGTGAAAACCAGTTCTG 59.048 55.000 0.00 0.00 0.00 3.02
44 45 1.749286 CGGGGTGAAAACCAGTTCTGT 60.749 52.381 0.00 0.00 0.00 3.41
45 46 1.954382 GGGGTGAAAACCAGTTCTGTC 59.046 52.381 0.00 0.00 0.00 3.51
46 47 2.422945 GGGGTGAAAACCAGTTCTGTCT 60.423 50.000 0.00 0.00 0.00 3.41
47 48 3.288092 GGGTGAAAACCAGTTCTGTCTT 58.712 45.455 0.00 0.00 0.00 3.01
48 49 3.315470 GGGTGAAAACCAGTTCTGTCTTC 59.685 47.826 0.00 0.54 0.00 2.87
49 50 3.002348 GGTGAAAACCAGTTCTGTCTTCG 59.998 47.826 0.00 0.00 0.00 3.79
50 51 3.002348 GTGAAAACCAGTTCTGTCTTCGG 59.998 47.826 0.00 0.00 0.00 4.30
51 52 2.256117 AAACCAGTTCTGTCTTCGGG 57.744 50.000 0.00 0.00 0.00 5.14
52 53 0.250338 AACCAGTTCTGTCTTCGGGC 60.250 55.000 0.00 0.00 0.00 6.13
53 54 1.371183 CCAGTTCTGTCTTCGGGCA 59.629 57.895 0.00 0.00 0.00 5.36
55 56 0.671781 CAGTTCTGTCTTCGGGCAGG 60.672 60.000 0.00 0.00 46.71 4.85
56 57 2.035442 GTTCTGTCTTCGGGCAGGC 61.035 63.158 0.00 0.00 46.71 4.85
57 58 3.254024 TTCTGTCTTCGGGCAGGCC 62.254 63.158 1.81 1.81 46.71 5.19
79 80 4.736896 GCGGCGAGTTCGTTCCCT 62.737 66.667 12.98 0.00 42.22 4.20
80 81 2.048503 CGGCGAGTTCGTTCCCTT 60.049 61.111 0.00 0.00 42.22 3.95
81 82 2.092882 CGGCGAGTTCGTTCCCTTC 61.093 63.158 0.00 0.00 42.22 3.46
82 83 1.292541 GGCGAGTTCGTTCCCTTCT 59.707 57.895 3.27 0.00 42.22 2.85
83 84 0.320508 GGCGAGTTCGTTCCCTTCTT 60.321 55.000 3.27 0.00 42.22 2.52
84 85 0.790814 GCGAGTTCGTTCCCTTCTTG 59.209 55.000 3.27 0.00 42.22 3.02
85 86 1.604693 GCGAGTTCGTTCCCTTCTTGA 60.605 52.381 3.27 0.00 42.22 3.02
86 87 2.750948 CGAGTTCGTTCCCTTCTTGAA 58.249 47.619 0.00 0.00 34.11 2.69
87 88 2.731976 CGAGTTCGTTCCCTTCTTGAAG 59.268 50.000 3.55 3.55 34.11 3.02
88 89 3.067833 GAGTTCGTTCCCTTCTTGAAGG 58.932 50.000 19.53 19.53 39.68 3.46
89 90 1.535896 GTTCGTTCCCTTCTTGAAGGC 59.464 52.381 20.71 9.02 38.63 4.35
90 91 0.320421 TCGTTCCCTTCTTGAAGGCG 60.320 55.000 20.71 18.28 38.63 5.52
91 92 1.298859 CGTTCCCTTCTTGAAGGCGG 61.299 60.000 20.71 10.58 38.63 6.13
92 93 1.303317 TTCCCTTCTTGAAGGCGGC 60.303 57.895 20.71 0.00 38.63 6.53
93 94 3.127533 CCCTTCTTGAAGGCGGCG 61.128 66.667 20.71 0.51 38.63 6.46
94 95 2.358737 CCTTCTTGAAGGCGGCGT 60.359 61.111 15.43 0.00 32.43 5.68
95 96 2.391389 CCTTCTTGAAGGCGGCGTC 61.391 63.158 17.78 17.78 32.43 5.19
96 97 2.730672 CTTCTTGAAGGCGGCGTCG 61.731 63.158 19.12 4.29 39.81 5.12
107 108 4.814294 GGCGTCGCGGTCCTCATT 62.814 66.667 11.75 0.00 0.00 2.57
108 109 3.554692 GCGTCGCGGTCCTCATTG 61.555 66.667 6.13 0.00 0.00 2.82
109 110 3.554692 CGTCGCGGTCCTCATTGC 61.555 66.667 6.13 0.00 0.00 3.56
110 111 3.195698 GTCGCGGTCCTCATTGCC 61.196 66.667 6.13 0.00 0.00 4.52
111 112 4.467084 TCGCGGTCCTCATTGCCC 62.467 66.667 6.13 0.00 0.00 5.36
112 113 4.776322 CGCGGTCCTCATTGCCCA 62.776 66.667 0.00 0.00 0.00 5.36
113 114 2.124151 GCGGTCCTCATTGCCCAT 60.124 61.111 0.00 0.00 0.00 4.00
114 115 1.754234 GCGGTCCTCATTGCCCATT 60.754 57.895 0.00 0.00 0.00 3.16
115 116 2.008268 GCGGTCCTCATTGCCCATTG 62.008 60.000 0.00 0.00 0.00 2.82
116 117 0.680921 CGGTCCTCATTGCCCATTGT 60.681 55.000 0.00 0.00 0.00 2.71
117 118 0.819582 GGTCCTCATTGCCCATTGTG 59.180 55.000 0.00 0.00 0.00 3.33
118 119 1.549203 GTCCTCATTGCCCATTGTGT 58.451 50.000 0.00 0.00 0.00 3.72
119 120 1.895131 GTCCTCATTGCCCATTGTGTT 59.105 47.619 0.00 0.00 0.00 3.32
120 121 1.894466 TCCTCATTGCCCATTGTGTTG 59.106 47.619 0.00 0.00 0.00 3.33
121 122 1.673626 CCTCATTGCCCATTGTGTTGC 60.674 52.381 0.00 0.00 0.00 4.17
122 123 1.274167 CTCATTGCCCATTGTGTTGCT 59.726 47.619 0.00 0.00 0.00 3.91
123 124 1.273048 TCATTGCCCATTGTGTTGCTC 59.727 47.619 0.00 0.00 0.00 4.26
124 125 0.609662 ATTGCCCATTGTGTTGCTCC 59.390 50.000 0.00 0.00 0.00 4.70
125 126 0.758310 TTGCCCATTGTGTTGCTCCA 60.758 50.000 0.00 0.00 0.00 3.86
126 127 1.180456 TGCCCATTGTGTTGCTCCAG 61.180 55.000 0.00 0.00 0.00 3.86
127 128 1.880819 GCCCATTGTGTTGCTCCAGG 61.881 60.000 0.00 0.00 0.00 4.45
128 129 1.252904 CCCATTGTGTTGCTCCAGGG 61.253 60.000 0.00 0.00 0.00 4.45
129 130 1.252904 CCATTGTGTTGCTCCAGGGG 61.253 60.000 0.00 0.00 0.00 4.79
130 131 0.251297 CATTGTGTTGCTCCAGGGGA 60.251 55.000 0.00 0.00 0.00 4.81
131 132 0.482446 ATTGTGTTGCTCCAGGGGAA 59.518 50.000 0.00 0.00 0.00 3.97
132 133 0.260230 TTGTGTTGCTCCAGGGGAAA 59.740 50.000 0.00 0.00 0.00 3.13
133 134 0.467290 TGTGTTGCTCCAGGGGAAAC 60.467 55.000 2.56 2.56 0.00 2.78
145 146 4.637771 GGAAACCCTGATCCGTGG 57.362 61.111 0.00 0.00 0.00 4.94
146 147 1.988015 GGAAACCCTGATCCGTGGA 59.012 57.895 0.00 0.00 0.00 4.02
147 148 0.546598 GGAAACCCTGATCCGTGGAT 59.453 55.000 0.00 0.00 37.59 3.41
175 176 4.509756 CGGAGCTCTGGTGTCATG 57.490 61.111 15.27 0.00 0.00 3.07
176 177 1.593787 CGGAGCTCTGGTGTCATGT 59.406 57.895 15.27 0.00 0.00 3.21
177 178 0.459237 CGGAGCTCTGGTGTCATGTC 60.459 60.000 15.27 0.00 0.00 3.06
178 179 0.107945 GGAGCTCTGGTGTCATGTCC 60.108 60.000 14.64 0.00 0.00 4.02
179 180 0.901124 GAGCTCTGGTGTCATGTCCT 59.099 55.000 6.43 0.00 0.00 3.85
180 181 1.277557 GAGCTCTGGTGTCATGTCCTT 59.722 52.381 6.43 0.00 0.00 3.36
181 182 1.277557 AGCTCTGGTGTCATGTCCTTC 59.722 52.381 0.00 0.00 0.00 3.46
182 183 1.677217 GCTCTGGTGTCATGTCCTTCC 60.677 57.143 0.00 0.00 0.00 3.46
183 184 1.905215 CTCTGGTGTCATGTCCTTCCT 59.095 52.381 0.00 0.00 0.00 3.36
184 185 1.625315 TCTGGTGTCATGTCCTTCCTG 59.375 52.381 0.00 0.00 0.00 3.86
185 186 1.625315 CTGGTGTCATGTCCTTCCTGA 59.375 52.381 0.00 0.00 0.00 3.86
186 187 2.038952 CTGGTGTCATGTCCTTCCTGAA 59.961 50.000 0.00 0.00 0.00 3.02
187 188 2.038952 TGGTGTCATGTCCTTCCTGAAG 59.961 50.000 0.00 0.00 38.14 3.02
195 196 4.803908 CTTCCTGAAGGGGCCGCC 62.804 72.222 17.56 9.34 34.87 6.13
201 202 4.803908 GAAGGGGCCGCCTTGGAG 62.804 72.222 25.10 0.00 42.00 3.86
209 210 4.379243 CGCCTTGGAGCTCACGGT 62.379 66.667 17.19 0.00 37.15 4.83
210 211 2.032681 GCCTTGGAGCTCACGGTT 59.967 61.111 17.19 0.00 37.15 4.44
211 212 2.035442 GCCTTGGAGCTCACGGTTC 61.035 63.158 17.19 0.00 37.15 3.62
212 213 1.738099 CCTTGGAGCTCACGGTTCG 60.738 63.158 17.19 0.00 30.83 3.95
213 214 1.006102 CTTGGAGCTCACGGTTCGT 60.006 57.895 17.19 0.00 42.36 3.85
214 215 1.006571 TTGGAGCTCACGGTTCGTC 60.007 57.895 17.19 0.00 38.32 4.20
215 216 2.504244 GGAGCTCACGGTTCGTCG 60.504 66.667 17.19 0.00 38.32 5.12
216 217 2.254651 GAGCTCACGGTTCGTCGT 59.745 61.111 9.40 0.00 44.91 4.34
217 218 1.499056 GAGCTCACGGTTCGTCGTA 59.501 57.895 9.40 0.00 41.86 3.43
218 219 0.098376 GAGCTCACGGTTCGTCGTAT 59.902 55.000 9.40 0.00 41.86 3.06
219 220 0.179171 AGCTCACGGTTCGTCGTATG 60.179 55.000 0.00 0.00 41.86 2.39
220 221 0.455633 GCTCACGGTTCGTCGTATGT 60.456 55.000 0.00 0.00 41.86 2.29
221 222 1.256652 CTCACGGTTCGTCGTATGTG 58.743 55.000 0.00 0.00 41.86 3.21
222 223 0.109643 TCACGGTTCGTCGTATGTGG 60.110 55.000 7.14 0.00 41.86 4.17
223 224 1.444895 ACGGTTCGTCGTATGTGGC 60.445 57.895 0.00 0.00 41.98 5.01
224 225 1.153901 CGGTTCGTCGTATGTGGCT 60.154 57.895 0.00 0.00 0.00 4.75
225 226 0.734942 CGGTTCGTCGTATGTGGCTT 60.735 55.000 0.00 0.00 0.00 4.35
226 227 0.997196 GGTTCGTCGTATGTGGCTTC 59.003 55.000 0.00 0.00 0.00 3.86
227 228 0.638746 GTTCGTCGTATGTGGCTTCG 59.361 55.000 0.00 0.00 0.00 3.79
228 229 0.241749 TTCGTCGTATGTGGCTTCGT 59.758 50.000 0.00 0.00 0.00 3.85
229 230 0.179181 TCGTCGTATGTGGCTTCGTC 60.179 55.000 0.00 0.00 0.00 4.20
230 231 0.179171 CGTCGTATGTGGCTTCGTCT 60.179 55.000 0.00 0.00 0.00 4.18
231 232 1.546834 GTCGTATGTGGCTTCGTCTC 58.453 55.000 0.00 0.00 0.00 3.36
232 233 1.132643 GTCGTATGTGGCTTCGTCTCT 59.867 52.381 0.00 0.00 0.00 3.10
233 234 1.816835 TCGTATGTGGCTTCGTCTCTT 59.183 47.619 0.00 0.00 0.00 2.85
234 235 2.159421 TCGTATGTGGCTTCGTCTCTTC 60.159 50.000 0.00 0.00 0.00 2.87
235 236 2.186076 GTATGTGGCTTCGTCTCTTCG 58.814 52.381 0.00 0.00 0.00 3.79
236 237 0.737715 ATGTGGCTTCGTCTCTTCGC 60.738 55.000 0.00 0.00 0.00 4.70
237 238 2.126463 TGGCTTCGTCTCTTCGCG 60.126 61.111 0.00 0.00 0.00 5.87
238 239 2.881352 GGCTTCGTCTCTTCGCGG 60.881 66.667 6.13 0.00 0.00 6.46
239 240 2.126424 GCTTCGTCTCTTCGCGGT 60.126 61.111 6.13 0.00 0.00 5.68
240 241 2.437343 GCTTCGTCTCTTCGCGGTG 61.437 63.158 6.13 0.00 0.00 4.94
241 242 1.801913 CTTCGTCTCTTCGCGGTGG 60.802 63.158 6.13 0.00 0.00 4.61
242 243 2.473664 CTTCGTCTCTTCGCGGTGGT 62.474 60.000 6.13 0.00 0.00 4.16
243 244 2.742710 TTCGTCTCTTCGCGGTGGTG 62.743 60.000 6.13 0.00 0.00 4.17
244 245 2.338984 GTCTCTTCGCGGTGGTGT 59.661 61.111 6.13 0.00 0.00 4.16
245 246 1.300697 GTCTCTTCGCGGTGGTGTT 60.301 57.895 6.13 0.00 0.00 3.32
246 247 1.006571 TCTCTTCGCGGTGGTGTTC 60.007 57.895 6.13 0.00 0.00 3.18
247 248 1.300620 CTCTTCGCGGTGGTGTTCA 60.301 57.895 6.13 0.00 0.00 3.18
248 249 1.557443 CTCTTCGCGGTGGTGTTCAC 61.557 60.000 6.13 0.00 45.34 3.18
249 250 2.938823 CTTCGCGGTGGTGTTCACG 61.939 63.158 6.13 0.00 46.96 4.35
250 251 4.953868 TCGCGGTGGTGTTCACGG 62.954 66.667 6.13 0.00 46.96 4.94
252 253 2.898343 GCGGTGGTGTTCACGGTT 60.898 61.111 0.00 0.00 46.96 4.44
253 254 3.018973 CGGTGGTGTTCACGGTTG 58.981 61.111 0.00 0.00 46.96 3.77
254 255 1.521906 CGGTGGTGTTCACGGTTGA 60.522 57.895 0.00 0.00 46.96 3.18
255 256 1.495584 CGGTGGTGTTCACGGTTGAG 61.496 60.000 0.00 0.00 46.96 3.02
256 257 1.164041 GGTGGTGTTCACGGTTGAGG 61.164 60.000 0.00 0.00 46.96 3.86
257 258 0.463116 GTGGTGTTCACGGTTGAGGT 60.463 55.000 0.00 0.00 36.56 3.85
258 259 0.179067 TGGTGTTCACGGTTGAGGTC 60.179 55.000 0.00 0.00 31.71 3.85
259 260 0.883370 GGTGTTCACGGTTGAGGTCC 60.883 60.000 0.00 0.00 31.71 4.46
260 261 0.883370 GTGTTCACGGTTGAGGTCCC 60.883 60.000 0.00 0.00 31.71 4.46
261 262 1.052124 TGTTCACGGTTGAGGTCCCT 61.052 55.000 0.00 0.00 31.71 4.20
262 263 0.602905 GTTCACGGTTGAGGTCCCTG 60.603 60.000 0.00 0.00 31.71 4.45
263 264 1.764571 TTCACGGTTGAGGTCCCTGG 61.765 60.000 0.00 0.00 31.71 4.45
264 265 2.122547 ACGGTTGAGGTCCCTGGT 60.123 61.111 0.00 0.00 0.00 4.00
265 266 1.156803 ACGGTTGAGGTCCCTGGTA 59.843 57.895 0.00 0.00 0.00 3.25
266 267 0.903454 ACGGTTGAGGTCCCTGGTAG 60.903 60.000 0.00 0.00 0.00 3.18
267 268 1.602771 GGTTGAGGTCCCTGGTAGC 59.397 63.158 0.00 0.00 0.00 3.58
268 269 0.910088 GGTTGAGGTCCCTGGTAGCT 60.910 60.000 0.00 0.00 0.00 3.32
269 270 0.537653 GTTGAGGTCCCTGGTAGCTC 59.462 60.000 11.14 11.14 40.95 4.09
270 271 0.413832 TTGAGGTCCCTGGTAGCTCT 59.586 55.000 17.66 0.00 41.11 4.09
271 272 0.413832 TGAGGTCCCTGGTAGCTCTT 59.586 55.000 17.66 0.00 41.11 2.85
272 273 0.827368 GAGGTCCCTGGTAGCTCTTG 59.173 60.000 10.82 0.00 38.23 3.02
273 274 0.618968 AGGTCCCTGGTAGCTCTTGG 60.619 60.000 0.00 0.00 0.00 3.61
274 275 0.617820 GGTCCCTGGTAGCTCTTGGA 60.618 60.000 0.00 0.00 0.00 3.53
275 276 0.827368 GTCCCTGGTAGCTCTTGGAG 59.173 60.000 0.00 0.00 0.00 3.86
284 285 3.297391 GCTCTTGGAGCGATTAGGG 57.703 57.895 3.74 0.00 45.85 3.53
285 286 0.466124 GCTCTTGGAGCGATTAGGGT 59.534 55.000 3.74 0.00 45.85 4.34
286 287 1.808133 GCTCTTGGAGCGATTAGGGTG 60.808 57.143 3.74 0.00 45.85 4.61
287 288 0.830648 TCTTGGAGCGATTAGGGTGG 59.169 55.000 0.00 0.00 0.00 4.61
288 289 0.541863 CTTGGAGCGATTAGGGTGGT 59.458 55.000 0.00 0.00 0.00 4.16
289 290 0.251916 TTGGAGCGATTAGGGTGGTG 59.748 55.000 0.00 0.00 0.00 4.17
290 291 0.907704 TGGAGCGATTAGGGTGGTGT 60.908 55.000 0.00 0.00 0.00 4.16
291 292 1.117150 GGAGCGATTAGGGTGGTGTA 58.883 55.000 0.00 0.00 0.00 2.90
292 293 1.068741 GGAGCGATTAGGGTGGTGTAG 59.931 57.143 0.00 0.00 0.00 2.74
293 294 1.755380 GAGCGATTAGGGTGGTGTAGT 59.245 52.381 0.00 0.00 0.00 2.73
294 295 2.167900 GAGCGATTAGGGTGGTGTAGTT 59.832 50.000 0.00 0.00 0.00 2.24
295 296 2.093658 AGCGATTAGGGTGGTGTAGTTG 60.094 50.000 0.00 0.00 0.00 3.16
296 297 2.277084 CGATTAGGGTGGTGTAGTTGC 58.723 52.381 0.00 0.00 0.00 4.17
297 298 2.277084 GATTAGGGTGGTGTAGTTGCG 58.723 52.381 0.00 0.00 0.00 4.85
298 299 0.320946 TTAGGGTGGTGTAGTTGCGC 60.321 55.000 0.00 0.00 0.00 6.09
299 300 1.189524 TAGGGTGGTGTAGTTGCGCT 61.190 55.000 9.73 0.00 0.00 5.92
300 301 2.033194 GGGTGGTGTAGTTGCGCTC 61.033 63.158 9.73 1.40 0.00 5.03
301 302 1.301401 GGTGGTGTAGTTGCGCTCA 60.301 57.895 9.73 0.00 0.00 4.26
302 303 0.882927 GGTGGTGTAGTTGCGCTCAA 60.883 55.000 9.73 0.00 0.00 3.02
311 312 3.623848 TTGCGCTCAACACCTATGT 57.376 47.368 9.73 0.00 42.46 2.29
312 313 2.753055 TTGCGCTCAACACCTATGTA 57.247 45.000 9.73 0.00 38.45 2.29
313 314 2.979814 TGCGCTCAACACCTATGTAT 57.020 45.000 9.73 0.00 38.45 2.29
314 315 2.821546 TGCGCTCAACACCTATGTATC 58.178 47.619 9.73 0.00 38.45 2.24
315 316 2.430694 TGCGCTCAACACCTATGTATCT 59.569 45.455 9.73 0.00 38.45 1.98
316 317 3.634910 TGCGCTCAACACCTATGTATCTA 59.365 43.478 9.73 0.00 38.45 1.98
317 318 4.230657 GCGCTCAACACCTATGTATCTAG 58.769 47.826 0.00 0.00 38.45 2.43
318 319 4.230657 CGCTCAACACCTATGTATCTAGC 58.769 47.826 0.00 0.00 38.45 3.42
319 320 4.561105 GCTCAACACCTATGTATCTAGCC 58.439 47.826 0.00 0.00 38.45 3.93
320 321 4.282195 GCTCAACACCTATGTATCTAGCCT 59.718 45.833 0.00 0.00 38.45 4.58
321 322 5.221541 GCTCAACACCTATGTATCTAGCCTT 60.222 44.000 0.00 0.00 38.45 4.35
322 323 6.161855 TCAACACCTATGTATCTAGCCTTG 57.838 41.667 0.00 0.00 38.45 3.61
323 324 5.897250 TCAACACCTATGTATCTAGCCTTGA 59.103 40.000 0.00 0.00 38.45 3.02
324 325 6.040955 TCAACACCTATGTATCTAGCCTTGAG 59.959 42.308 0.00 0.00 38.45 3.02
325 326 5.459505 ACACCTATGTATCTAGCCTTGAGT 58.540 41.667 0.00 0.00 37.26 3.41
326 327 5.303078 ACACCTATGTATCTAGCCTTGAGTG 59.697 44.000 0.00 0.00 37.26 3.51
327 328 5.303078 CACCTATGTATCTAGCCTTGAGTGT 59.697 44.000 0.00 0.00 0.00 3.55
328 329 5.303078 ACCTATGTATCTAGCCTTGAGTGTG 59.697 44.000 0.00 0.00 0.00 3.82
329 330 5.303078 CCTATGTATCTAGCCTTGAGTGTGT 59.697 44.000 0.00 0.00 0.00 3.72
330 331 4.456280 TGTATCTAGCCTTGAGTGTGTG 57.544 45.455 0.00 0.00 0.00 3.82
331 332 2.393271 ATCTAGCCTTGAGTGTGTGC 57.607 50.000 0.00 0.00 0.00 4.57
332 333 0.038251 TCTAGCCTTGAGTGTGTGCG 60.038 55.000 0.00 0.00 0.00 5.34
333 334 0.319900 CTAGCCTTGAGTGTGTGCGT 60.320 55.000 0.00 0.00 0.00 5.24
334 335 0.599991 TAGCCTTGAGTGTGTGCGTG 60.600 55.000 0.00 0.00 0.00 5.34
335 336 2.180204 GCCTTGAGTGTGTGCGTGT 61.180 57.895 0.00 0.00 0.00 4.49
336 337 1.643292 CCTTGAGTGTGTGCGTGTG 59.357 57.895 0.00 0.00 0.00 3.82
337 338 1.089481 CCTTGAGTGTGTGCGTGTGT 61.089 55.000 0.00 0.00 0.00 3.72
338 339 0.726827 CTTGAGTGTGTGCGTGTGTT 59.273 50.000 0.00 0.00 0.00 3.32
339 340 0.445829 TTGAGTGTGTGCGTGTGTTG 59.554 50.000 0.00 0.00 0.00 3.33
340 341 1.351707 GAGTGTGTGCGTGTGTTGG 59.648 57.895 0.00 0.00 0.00 3.77
341 342 2.047151 GAGTGTGTGCGTGTGTTGGG 62.047 60.000 0.00 0.00 0.00 4.12
342 343 2.826287 TGTGTGCGTGTGTTGGGG 60.826 61.111 0.00 0.00 0.00 4.96
343 344 2.826738 GTGTGCGTGTGTTGGGGT 60.827 61.111 0.00 0.00 0.00 4.95
344 345 2.826287 TGTGCGTGTGTTGGGGTG 60.826 61.111 0.00 0.00 0.00 4.61
345 346 3.591835 GTGCGTGTGTTGGGGTGG 61.592 66.667 0.00 0.00 0.00 4.61
349 350 3.591835 GTGTGTTGGGGTGGCGTG 61.592 66.667 0.00 0.00 0.00 5.34
350 351 4.116585 TGTGTTGGGGTGGCGTGT 62.117 61.111 0.00 0.00 0.00 4.49
351 352 3.591835 GTGTTGGGGTGGCGTGTG 61.592 66.667 0.00 0.00 0.00 3.82
352 353 4.116585 TGTTGGGGTGGCGTGTGT 62.117 61.111 0.00 0.00 0.00 3.72
353 354 2.831284 GTTGGGGTGGCGTGTGTT 60.831 61.111 0.00 0.00 0.00 3.32
354 355 2.043852 TTGGGGTGGCGTGTGTTT 60.044 55.556 0.00 0.00 0.00 2.83
355 356 2.418910 TTGGGGTGGCGTGTGTTTG 61.419 57.895 0.00 0.00 0.00 2.93
356 357 2.831284 GGGGTGGCGTGTGTTTGT 60.831 61.111 0.00 0.00 0.00 2.83
357 358 1.526455 GGGGTGGCGTGTGTTTGTA 60.526 57.895 0.00 0.00 0.00 2.41
358 359 0.891904 GGGGTGGCGTGTGTTTGTAT 60.892 55.000 0.00 0.00 0.00 2.29
359 360 0.519961 GGGTGGCGTGTGTTTGTATC 59.480 55.000 0.00 0.00 0.00 2.24
360 361 0.165079 GGTGGCGTGTGTTTGTATCG 59.835 55.000 0.00 0.00 0.00 2.92
361 362 1.141645 GTGGCGTGTGTTTGTATCGA 58.858 50.000 0.00 0.00 0.00 3.59
362 363 1.136446 GTGGCGTGTGTTTGTATCGAC 60.136 52.381 0.00 0.00 0.00 4.20
363 364 1.269883 TGGCGTGTGTTTGTATCGACT 60.270 47.619 0.00 0.00 0.00 4.18
364 365 1.796459 GGCGTGTGTTTGTATCGACTT 59.204 47.619 0.00 0.00 0.00 3.01
365 366 2.411031 GGCGTGTGTTTGTATCGACTTG 60.411 50.000 0.00 0.00 0.00 3.16
366 367 2.220133 GCGTGTGTTTGTATCGACTTGT 59.780 45.455 0.00 0.00 0.00 3.16
367 368 3.302870 GCGTGTGTTTGTATCGACTTGTT 60.303 43.478 0.00 0.00 0.00 2.83
368 369 4.200827 CGTGTGTTTGTATCGACTTGTTG 58.799 43.478 0.00 0.00 0.00 3.33
369 370 4.026393 CGTGTGTTTGTATCGACTTGTTGA 60.026 41.667 0.00 0.00 0.00 3.18
370 371 5.333035 CGTGTGTTTGTATCGACTTGTTGAT 60.333 40.000 8.38 8.38 0.00 2.57
371 372 5.845953 GTGTGTTTGTATCGACTTGTTGATG 59.154 40.000 12.41 0.00 0.00 3.07
372 373 5.049749 TGTGTTTGTATCGACTTGTTGATGG 60.050 40.000 12.41 0.00 0.00 3.51
373 374 5.049680 GTGTTTGTATCGACTTGTTGATGGT 60.050 40.000 12.41 0.00 0.00 3.55
374 375 5.529430 TGTTTGTATCGACTTGTTGATGGTT 59.471 36.000 12.41 0.00 0.00 3.67
375 376 6.706716 TGTTTGTATCGACTTGTTGATGGTTA 59.293 34.615 12.41 0.00 0.00 2.85
376 377 7.389330 TGTTTGTATCGACTTGTTGATGGTTAT 59.611 33.333 12.41 0.00 0.00 1.89
377 378 7.915293 TTGTATCGACTTGTTGATGGTTATT 57.085 32.000 12.41 0.00 0.00 1.40
378 379 7.302350 TGTATCGACTTGTTGATGGTTATTG 57.698 36.000 12.41 0.00 0.00 1.90
379 380 4.678509 TCGACTTGTTGATGGTTATTGC 57.321 40.909 0.00 0.00 0.00 3.56
380 381 4.323417 TCGACTTGTTGATGGTTATTGCT 58.677 39.130 0.00 0.00 0.00 3.91
381 382 4.759693 TCGACTTGTTGATGGTTATTGCTT 59.240 37.500 0.00 0.00 0.00 3.91
382 383 5.240623 TCGACTTGTTGATGGTTATTGCTTT 59.759 36.000 0.00 0.00 0.00 3.51
383 384 6.428465 TCGACTTGTTGATGGTTATTGCTTTA 59.572 34.615 0.00 0.00 0.00 1.85
384 385 7.120579 TCGACTTGTTGATGGTTATTGCTTTAT 59.879 33.333 0.00 0.00 0.00 1.40
385 386 8.394877 CGACTTGTTGATGGTTATTGCTTTATA 58.605 33.333 0.00 0.00 0.00 0.98
402 403 6.730960 CTTTATATATAAAGCCGGGCGAAA 57.269 37.500 25.10 2.81 41.69 3.46
403 404 6.730960 TTTATATATAAAGCCGGGCGAAAG 57.269 37.500 14.39 0.00 0.00 2.62
422 423 7.707774 CGAAAGCCTTTTTGGATAAAAGAAA 57.292 32.000 10.65 0.00 39.04 2.52
423 424 7.787084 CGAAAGCCTTTTTGGATAAAAGAAAG 58.213 34.615 10.65 0.00 39.04 2.62
424 425 7.651704 CGAAAGCCTTTTTGGATAAAAGAAAGA 59.348 33.333 10.65 0.00 39.04 2.52
425 426 9.325198 GAAAGCCTTTTTGGATAAAAGAAAGAA 57.675 29.630 10.65 0.00 39.04 2.52
426 427 9.679661 AAAGCCTTTTTGGATAAAAGAAAGAAA 57.320 25.926 10.65 0.00 39.04 2.52
427 428 8.893219 AGCCTTTTTGGATAAAAGAAAGAAAG 57.107 30.769 10.65 0.00 39.04 2.62
428 429 8.704668 AGCCTTTTTGGATAAAAGAAAGAAAGA 58.295 29.630 10.65 0.00 39.04 2.52
429 430 9.325198 GCCTTTTTGGATAAAAGAAAGAAAGAA 57.675 29.630 10.65 0.00 39.04 2.52
452 453 6.663944 AAAAAGAGCTTCATACGGTACATC 57.336 37.500 0.00 0.00 0.00 3.06
453 454 5.599999 AAAGAGCTTCATACGGTACATCT 57.400 39.130 0.00 0.00 0.00 2.90
454 455 6.710597 AAAGAGCTTCATACGGTACATCTA 57.289 37.500 0.00 0.00 0.00 1.98
455 456 6.902771 AAGAGCTTCATACGGTACATCTAT 57.097 37.500 0.00 0.00 0.00 1.98
456 457 6.503589 AGAGCTTCATACGGTACATCTATC 57.496 41.667 0.00 0.00 0.00 2.08
457 458 6.004574 AGAGCTTCATACGGTACATCTATCA 58.995 40.000 0.00 0.00 0.00 2.15
458 459 6.150307 AGAGCTTCATACGGTACATCTATCAG 59.850 42.308 0.00 0.00 0.00 2.90
459 460 6.004574 AGCTTCATACGGTACATCTATCAGA 58.995 40.000 0.00 0.00 0.00 3.27
460 461 6.490381 AGCTTCATACGGTACATCTATCAGAA 59.510 38.462 0.00 0.00 0.00 3.02
461 462 6.583050 GCTTCATACGGTACATCTATCAGAAC 59.417 42.308 0.00 0.00 0.00 3.01
462 463 7.522399 GCTTCATACGGTACATCTATCAGAACT 60.522 40.741 0.00 0.00 0.00 3.01
463 464 8.913487 TTCATACGGTACATCTATCAGAACTA 57.087 34.615 0.00 0.00 0.00 2.24
464 465 8.549338 TCATACGGTACATCTATCAGAACTAG 57.451 38.462 0.00 0.00 0.00 2.57
465 466 8.373220 TCATACGGTACATCTATCAGAACTAGA 58.627 37.037 0.00 0.00 0.00 2.43
466 467 6.864360 ACGGTACATCTATCAGAACTAGAC 57.136 41.667 0.00 0.00 0.00 2.59
467 468 6.354938 ACGGTACATCTATCAGAACTAGACA 58.645 40.000 0.00 0.00 0.00 3.41
468 469 6.999272 ACGGTACATCTATCAGAACTAGACAT 59.001 38.462 0.00 0.00 0.00 3.06
469 470 7.173562 ACGGTACATCTATCAGAACTAGACATC 59.826 40.741 0.00 0.00 0.00 3.06
470 471 7.389330 CGGTACATCTATCAGAACTAGACATCT 59.611 40.741 0.00 0.00 0.00 2.90
471 472 8.726988 GGTACATCTATCAGAACTAGACATCTC 58.273 40.741 0.00 0.00 0.00 2.75
472 473 7.759489 ACATCTATCAGAACTAGACATCTCC 57.241 40.000 0.00 0.00 0.00 3.71
473 474 6.719370 ACATCTATCAGAACTAGACATCTCCC 59.281 42.308 0.00 0.00 0.00 4.30
474 475 6.523035 TCTATCAGAACTAGACATCTCCCT 57.477 41.667 0.00 0.00 0.00 4.20
475 476 6.303054 TCTATCAGAACTAGACATCTCCCTG 58.697 44.000 0.00 0.00 0.00 4.45
476 477 4.323569 TCAGAACTAGACATCTCCCTGT 57.676 45.455 0.00 0.00 0.00 4.00
477 478 4.019858 TCAGAACTAGACATCTCCCTGTG 58.980 47.826 0.00 0.00 0.00 3.66
478 479 4.019858 CAGAACTAGACATCTCCCTGTGA 58.980 47.826 0.00 0.00 0.00 3.58
479 480 4.020543 AGAACTAGACATCTCCCTGTGAC 58.979 47.826 0.00 0.00 0.00 3.67
480 481 3.748645 ACTAGACATCTCCCTGTGACT 57.251 47.619 0.00 0.00 0.00 3.41
481 482 3.360867 ACTAGACATCTCCCTGTGACTG 58.639 50.000 0.00 0.00 0.00 3.51
482 483 2.317371 AGACATCTCCCTGTGACTGT 57.683 50.000 0.00 0.00 0.00 3.55
483 484 3.458044 AGACATCTCCCTGTGACTGTA 57.542 47.619 0.00 0.00 0.00 2.74
484 485 3.987745 AGACATCTCCCTGTGACTGTAT 58.012 45.455 0.00 0.00 0.00 2.29
485 486 3.703556 AGACATCTCCCTGTGACTGTATG 59.296 47.826 0.00 0.00 0.00 2.39
486 487 2.169352 ACATCTCCCTGTGACTGTATGC 59.831 50.000 0.00 0.00 0.00 3.14
487 488 1.195115 TCTCCCTGTGACTGTATGCC 58.805 55.000 0.00 0.00 0.00 4.40
488 489 0.179100 CTCCCTGTGACTGTATGCCG 60.179 60.000 0.00 0.00 0.00 5.69
489 490 1.815421 CCCTGTGACTGTATGCCGC 60.815 63.158 0.00 0.00 0.00 6.53
490 491 1.815421 CCTGTGACTGTATGCCGCC 60.815 63.158 0.00 0.00 0.00 6.13
491 492 1.815421 CTGTGACTGTATGCCGCCC 60.815 63.158 0.00 0.00 0.00 6.13
492 493 2.267642 GTGACTGTATGCCGCCCA 59.732 61.111 0.00 0.00 0.00 5.36
493 494 2.106683 GTGACTGTATGCCGCCCAC 61.107 63.158 0.00 0.00 0.00 4.61
494 495 2.267642 GACTGTATGCCGCCCACA 59.732 61.111 0.00 0.00 0.00 4.17
495 496 1.376683 GACTGTATGCCGCCCACAA 60.377 57.895 0.00 0.00 0.00 3.33
496 497 1.644786 GACTGTATGCCGCCCACAAC 61.645 60.000 0.00 0.00 0.00 3.32
497 498 1.673993 CTGTATGCCGCCCACAACA 60.674 57.895 0.00 0.00 0.00 3.33
498 499 1.001517 TGTATGCCGCCCACAACAT 60.002 52.632 0.00 0.00 0.00 2.71
499 500 0.253327 TGTATGCCGCCCACAACATA 59.747 50.000 0.00 0.00 0.00 2.29
500 501 1.133945 TGTATGCCGCCCACAACATAT 60.134 47.619 0.00 0.00 0.00 1.78
501 502 2.104963 TGTATGCCGCCCACAACATATA 59.895 45.455 0.00 0.00 0.00 0.86
502 503 2.584835 ATGCCGCCCACAACATATAT 57.415 45.000 0.00 0.00 0.00 0.86
503 504 3.712016 ATGCCGCCCACAACATATATA 57.288 42.857 0.00 0.00 0.00 0.86
504 505 3.712016 TGCCGCCCACAACATATATAT 57.288 42.857 0.00 0.00 0.00 0.86
505 506 4.027674 TGCCGCCCACAACATATATATT 57.972 40.909 0.00 0.00 0.00 1.28
506 507 3.755905 TGCCGCCCACAACATATATATTG 59.244 43.478 2.11 2.11 0.00 1.90
507 508 3.128589 GCCGCCCACAACATATATATTGG 59.871 47.826 8.54 4.71 0.00 3.16
508 509 4.584874 CCGCCCACAACATATATATTGGA 58.415 43.478 8.54 0.00 0.00 3.53
509 510 4.635765 CCGCCCACAACATATATATTGGAG 59.364 45.833 8.54 0.95 0.00 3.86
510 511 5.245531 CGCCCACAACATATATATTGGAGT 58.754 41.667 8.54 0.00 0.00 3.85
511 512 5.705441 CGCCCACAACATATATATTGGAGTT 59.295 40.000 8.54 2.53 0.00 3.01
512 513 6.206634 CGCCCACAACATATATATTGGAGTTT 59.793 38.462 8.54 0.00 0.00 2.66
513 514 7.389330 CGCCCACAACATATATATTGGAGTTTA 59.611 37.037 8.54 0.00 0.00 2.01
514 515 8.730680 GCCCACAACATATATATTGGAGTTTAG 58.269 37.037 8.54 1.22 0.00 1.85
515 516 9.231297 CCCACAACATATATATTGGAGTTTAGG 57.769 37.037 8.54 7.83 0.00 2.69
528 529 7.841282 TTGGAGTTTAGGATATGAGTCTAGG 57.159 40.000 0.00 0.00 0.00 3.02
529 530 6.315714 TGGAGTTTAGGATATGAGTCTAGGG 58.684 44.000 0.00 0.00 0.00 3.53
530 531 6.104243 TGGAGTTTAGGATATGAGTCTAGGGA 59.896 42.308 0.00 0.00 0.00 4.20
531 532 6.661805 GGAGTTTAGGATATGAGTCTAGGGAG 59.338 46.154 0.00 0.00 0.00 4.30
532 533 6.014012 AGTTTAGGATATGAGTCTAGGGAGC 58.986 44.000 0.00 0.00 0.00 4.70
533 534 5.869540 TTAGGATATGAGTCTAGGGAGCT 57.130 43.478 0.00 0.00 0.00 4.09
534 535 4.757997 AGGATATGAGTCTAGGGAGCTT 57.242 45.455 0.00 0.00 0.00 3.74
535 536 5.869540 AGGATATGAGTCTAGGGAGCTTA 57.130 43.478 0.00 0.00 0.00 3.09
536 537 6.416044 AGGATATGAGTCTAGGGAGCTTAT 57.584 41.667 0.00 0.00 0.00 1.73
537 538 6.810500 AGGATATGAGTCTAGGGAGCTTATT 58.189 40.000 0.00 0.00 0.00 1.40
538 539 6.895204 AGGATATGAGTCTAGGGAGCTTATTC 59.105 42.308 0.00 0.00 0.00 1.75
539 540 6.895204 GGATATGAGTCTAGGGAGCTTATTCT 59.105 42.308 0.00 0.00 0.00 2.40
540 541 7.398904 GGATATGAGTCTAGGGAGCTTATTCTT 59.601 40.741 0.00 0.00 0.00 2.52
541 542 8.734593 ATATGAGTCTAGGGAGCTTATTCTTT 57.265 34.615 0.00 0.00 0.00 2.52
542 543 9.830186 ATATGAGTCTAGGGAGCTTATTCTTTA 57.170 33.333 0.00 0.00 0.00 1.85
543 544 8.734593 ATGAGTCTAGGGAGCTTATTCTTTAT 57.265 34.615 0.00 0.00 0.00 1.40
544 545 8.554490 TGAGTCTAGGGAGCTTATTCTTTATT 57.446 34.615 0.00 0.00 0.00 1.40
545 546 8.993424 TGAGTCTAGGGAGCTTATTCTTTATTT 58.007 33.333 0.00 0.00 0.00 1.40
546 547 9.839817 GAGTCTAGGGAGCTTATTCTTTATTTT 57.160 33.333 0.00 0.00 0.00 1.82
547 548 9.620259 AGTCTAGGGAGCTTATTCTTTATTTTG 57.380 33.333 0.00 0.00 0.00 2.44
548 549 8.346300 GTCTAGGGAGCTTATTCTTTATTTTGC 58.654 37.037 0.00 0.00 0.00 3.68
549 550 6.471233 AGGGAGCTTATTCTTTATTTTGCC 57.529 37.500 0.00 0.00 0.00 4.52
550 551 6.197903 AGGGAGCTTATTCTTTATTTTGCCT 58.802 36.000 0.00 0.00 0.00 4.75
551 552 6.669591 AGGGAGCTTATTCTTTATTTTGCCTT 59.330 34.615 0.00 0.00 0.00 4.35
552 553 7.839200 AGGGAGCTTATTCTTTATTTTGCCTTA 59.161 33.333 0.00 0.00 0.00 2.69
553 554 7.921214 GGGAGCTTATTCTTTATTTTGCCTTAC 59.079 37.037 0.00 0.00 0.00 2.34
554 555 7.921214 GGAGCTTATTCTTTATTTTGCCTTACC 59.079 37.037 0.00 0.00 0.00 2.85
555 556 7.480810 AGCTTATTCTTTATTTTGCCTTACCG 58.519 34.615 0.00 0.00 0.00 4.02
556 557 6.695713 GCTTATTCTTTATTTTGCCTTACCGG 59.304 38.462 0.00 0.00 0.00 5.28
557 558 7.629866 GCTTATTCTTTATTTTGCCTTACCGGT 60.630 37.037 13.98 13.98 34.25 5.28
558 559 6.599356 ATTCTTTATTTTGCCTTACCGGTT 57.401 33.333 15.04 0.00 34.25 4.44
559 560 5.379732 TCTTTATTTTGCCTTACCGGTTG 57.620 39.130 15.04 6.33 34.25 3.77
560 561 4.828387 TCTTTATTTTGCCTTACCGGTTGT 59.172 37.500 15.04 0.00 34.25 3.32
561 562 4.506886 TTATTTTGCCTTACCGGTTGTG 57.493 40.909 15.04 1.87 34.25 3.33
562 563 2.054232 TTTTGCCTTACCGGTTGTGA 57.946 45.000 15.04 0.00 34.25 3.58
563 564 2.279935 TTTGCCTTACCGGTTGTGAT 57.720 45.000 15.04 0.00 34.25 3.06
564 565 2.279935 TTGCCTTACCGGTTGTGATT 57.720 45.000 15.04 0.00 34.25 2.57
565 566 2.279935 TGCCTTACCGGTTGTGATTT 57.720 45.000 15.04 0.00 34.25 2.17
566 567 2.588620 TGCCTTACCGGTTGTGATTTT 58.411 42.857 15.04 0.00 34.25 1.82
567 568 2.294791 TGCCTTACCGGTTGTGATTTTG 59.705 45.455 15.04 0.00 34.25 2.44
568 569 2.554893 GCCTTACCGGTTGTGATTTTGA 59.445 45.455 15.04 0.00 34.25 2.69
569 570 3.365969 GCCTTACCGGTTGTGATTTTGAG 60.366 47.826 15.04 0.00 34.25 3.02
570 571 3.365969 CCTTACCGGTTGTGATTTTGAGC 60.366 47.826 15.04 0.00 0.00 4.26
571 572 1.686355 ACCGGTTGTGATTTTGAGCA 58.314 45.000 0.00 0.00 0.00 4.26
572 573 2.238521 ACCGGTTGTGATTTTGAGCAT 58.761 42.857 0.00 0.00 0.00 3.79
573 574 2.030007 ACCGGTTGTGATTTTGAGCATG 60.030 45.455 0.00 0.00 0.00 4.06
574 575 2.030007 CCGGTTGTGATTTTGAGCATGT 60.030 45.455 0.00 0.00 0.00 3.21
575 576 3.190327 CCGGTTGTGATTTTGAGCATGTA 59.810 43.478 0.00 0.00 0.00 2.29
576 577 4.158384 CGGTTGTGATTTTGAGCATGTAC 58.842 43.478 0.00 0.00 0.00 2.90
577 578 4.083324 CGGTTGTGATTTTGAGCATGTACT 60.083 41.667 0.00 0.00 0.00 2.73
578 579 5.562696 CGGTTGTGATTTTGAGCATGTACTT 60.563 40.000 0.00 0.00 0.00 2.24
579 580 5.858581 GGTTGTGATTTTGAGCATGTACTTC 59.141 40.000 0.00 0.00 0.00 3.01
580 581 6.294176 GGTTGTGATTTTGAGCATGTACTTCT 60.294 38.462 0.00 0.00 0.00 2.85
581 582 6.882610 TGTGATTTTGAGCATGTACTTCTT 57.117 33.333 0.00 0.00 0.00 2.52
582 583 7.275888 TGTGATTTTGAGCATGTACTTCTTT 57.724 32.000 0.00 0.00 0.00 2.52
583 584 7.715657 TGTGATTTTGAGCATGTACTTCTTTT 58.284 30.769 0.00 0.00 0.00 2.27
584 585 8.196771 TGTGATTTTGAGCATGTACTTCTTTTT 58.803 29.630 0.00 0.00 0.00 1.94
604 605 1.285578 TTTTGTTTTGCTCCGCTTGC 58.714 45.000 0.00 0.00 0.00 4.01
605 606 0.869454 TTTGTTTTGCTCCGCTTGCG 60.869 50.000 8.14 8.14 0.00 4.85
606 607 1.719725 TTGTTTTGCTCCGCTTGCGA 61.720 50.000 16.99 2.09 0.00 5.10
607 608 1.441016 GTTTTGCTCCGCTTGCGAG 60.441 57.895 16.99 12.25 0.00 5.03
613 614 3.569916 CTCCGCTTGCGAGCTATAA 57.430 52.632 23.42 5.45 46.96 0.98
614 615 2.071688 CTCCGCTTGCGAGCTATAAT 57.928 50.000 23.42 0.00 46.96 1.28
615 616 3.217599 CTCCGCTTGCGAGCTATAATA 57.782 47.619 23.42 2.05 46.96 0.98
616 617 2.917971 CTCCGCTTGCGAGCTATAATAC 59.082 50.000 23.42 0.00 46.96 1.89
617 618 2.557056 TCCGCTTGCGAGCTATAATACT 59.443 45.455 23.42 0.00 46.96 2.12
618 619 3.005472 TCCGCTTGCGAGCTATAATACTT 59.995 43.478 23.42 0.00 46.96 2.24
619 620 3.741344 CCGCTTGCGAGCTATAATACTTT 59.259 43.478 23.42 0.00 46.96 2.66
620 621 4.211374 CCGCTTGCGAGCTATAATACTTTT 59.789 41.667 23.42 0.00 46.96 2.27
621 622 5.404366 CCGCTTGCGAGCTATAATACTTTTA 59.596 40.000 23.42 0.00 46.96 1.52
622 623 6.090898 CCGCTTGCGAGCTATAATACTTTTAT 59.909 38.462 23.42 0.00 46.96 1.40
623 624 6.950428 CGCTTGCGAGCTATAATACTTTTATG 59.050 38.462 23.42 0.00 46.96 1.90
624 625 7.148804 CGCTTGCGAGCTATAATACTTTTATGA 60.149 37.037 23.42 0.00 46.96 2.15
625 626 7.952637 GCTTGCGAGCTATAATACTTTTATGAC 59.047 37.037 19.25 0.00 45.65 3.06
626 627 9.197694 CTTGCGAGCTATAATACTTTTATGACT 57.802 33.333 0.00 0.00 0.00 3.41
627 628 9.542462 TTGCGAGCTATAATACTTTTATGACTT 57.458 29.630 0.00 0.00 0.00 3.01
628 629 9.542462 TGCGAGCTATAATACTTTTATGACTTT 57.458 29.630 0.00 0.00 0.00 2.66
629 630 9.798885 GCGAGCTATAATACTTTTATGACTTTG 57.201 33.333 0.00 0.00 0.00 2.77
662 663 6.874288 AAGACTATTCAATAAGATGGCTGC 57.126 37.500 0.00 0.00 0.00 5.25
663 664 5.933617 AGACTATTCAATAAGATGGCTGCA 58.066 37.500 0.50 0.00 0.00 4.41
664 665 6.540995 AGACTATTCAATAAGATGGCTGCAT 58.459 36.000 0.50 0.00 0.00 3.96
665 666 6.430308 AGACTATTCAATAAGATGGCTGCATG 59.570 38.462 0.50 0.00 0.00 4.06
666 667 3.720949 TTCAATAAGATGGCTGCATGC 57.279 42.857 11.82 11.82 41.94 4.06
667 668 2.657143 TCAATAAGATGGCTGCATGCA 58.343 42.857 21.29 21.29 45.15 3.96
668 669 3.227614 TCAATAAGATGGCTGCATGCAT 58.772 40.909 22.97 5.92 45.15 3.96
669 670 3.005367 TCAATAAGATGGCTGCATGCATG 59.995 43.478 22.97 22.70 45.15 4.06
670 671 2.351706 TAAGATGGCTGCATGCATGA 57.648 45.000 30.64 13.95 45.15 3.07
671 672 1.704641 AAGATGGCTGCATGCATGAT 58.295 45.000 30.64 14.06 45.15 2.45
672 673 1.704641 AGATGGCTGCATGCATGATT 58.295 45.000 30.64 6.95 45.15 2.57
673 674 2.871453 AGATGGCTGCATGCATGATTA 58.129 42.857 30.64 13.90 45.15 1.75
674 675 3.431415 AGATGGCTGCATGCATGATTAT 58.569 40.909 30.64 15.04 45.15 1.28
675 676 3.193479 AGATGGCTGCATGCATGATTATG 59.807 43.478 30.64 8.76 45.15 1.90
676 677 2.588620 TGGCTGCATGCATGATTATGA 58.411 42.857 30.64 5.79 45.15 2.15
677 678 3.161866 TGGCTGCATGCATGATTATGAT 58.838 40.909 30.64 0.00 45.15 2.45
678 679 3.056891 TGGCTGCATGCATGATTATGATG 60.057 43.478 30.64 6.35 45.15 3.07
679 680 2.923655 GCTGCATGCATGATTATGATGC 59.076 45.455 30.64 13.09 45.45 3.91
685 686 3.489180 GCATGATTATGATGCAGAGGC 57.511 47.619 11.54 0.00 44.74 4.70
686 687 2.163815 GCATGATTATGATGCAGAGGCC 59.836 50.000 11.54 0.00 44.74 5.19
687 688 2.174363 TGATTATGATGCAGAGGCCG 57.826 50.000 0.00 0.00 40.13 6.13
688 689 1.693606 TGATTATGATGCAGAGGCCGA 59.306 47.619 0.00 0.00 40.13 5.54
689 690 2.289257 TGATTATGATGCAGAGGCCGAG 60.289 50.000 0.00 0.00 40.13 4.63
690 691 0.394192 TTATGATGCAGAGGCCGAGG 59.606 55.000 0.00 0.00 40.13 4.63
691 692 0.469892 TATGATGCAGAGGCCGAGGA 60.470 55.000 0.00 0.00 40.13 3.71
692 693 1.126329 ATGATGCAGAGGCCGAGGAT 61.126 55.000 0.00 0.00 40.13 3.24
693 694 0.469892 TGATGCAGAGGCCGAGGATA 60.470 55.000 0.00 0.00 40.13 2.59
694 695 0.037790 GATGCAGAGGCCGAGGATAC 60.038 60.000 0.00 0.00 40.13 2.24
695 696 1.810606 ATGCAGAGGCCGAGGATACG 61.811 60.000 0.00 0.00 40.46 3.06
696 697 2.336809 CAGAGGCCGAGGATACGC 59.663 66.667 0.00 0.00 46.39 4.42
697 698 2.913060 AGAGGCCGAGGATACGCC 60.913 66.667 0.00 0.00 46.39 5.68
707 708 0.765510 AGGATACGCCTCCATTTCCC 59.234 55.000 6.63 0.00 46.97 3.97
708 709 0.472471 GGATACGCCTCCATTTCCCA 59.528 55.000 0.00 0.00 35.24 4.37
709 710 1.073923 GGATACGCCTCCATTTCCCAT 59.926 52.381 0.00 0.00 35.24 4.00
710 711 2.304761 GGATACGCCTCCATTTCCCATA 59.695 50.000 0.00 0.00 35.24 2.74
711 712 3.244770 GGATACGCCTCCATTTCCCATAA 60.245 47.826 0.00 0.00 35.24 1.90
712 713 2.818751 ACGCCTCCATTTCCCATAAA 57.181 45.000 0.00 0.00 0.00 1.40
713 714 3.094484 ACGCCTCCATTTCCCATAAAA 57.906 42.857 0.00 0.00 0.00 1.52
714 715 3.436243 ACGCCTCCATTTCCCATAAAAA 58.564 40.909 0.00 0.00 0.00 1.94
738 739 7.891183 AACAGCATATATTGGAATCGAGTAC 57.109 36.000 0.00 0.00 0.00 2.73
928 936 5.105917 TGCCAAGGTCCTTCGAAATTAATTC 60.106 40.000 0.00 0.00 34.52 2.17
977 1009 9.979578 CTAGATGACAATCTTCTATATATGCCC 57.020 37.037 0.00 0.00 40.42 5.36
1009 1041 5.940470 ACAGTTCAATAGATCAACCTCAACC 59.060 40.000 0.00 0.00 0.00 3.77
1037 1072 7.175641 ACATAACATCTCAGAAACCCAAGAAAG 59.824 37.037 0.00 0.00 0.00 2.62
1040 1076 4.771114 TCTCAGAAACCCAAGAAAGTCA 57.229 40.909 0.00 0.00 0.00 3.41
1207 1243 3.726517 CCAACAAGGACAGCGCCG 61.727 66.667 2.29 0.00 41.22 6.46
1312 1348 1.003718 AAGGCCGAGGAAAAGGACG 60.004 57.895 0.00 0.00 41.45 4.79
1365 1401 1.339097 ATATGTACTCCGGGGCTGTC 58.661 55.000 0.00 0.00 0.00 3.51
1368 1404 4.371417 TACTCCGGGGCTGTCGGT 62.371 66.667 0.00 0.00 46.82 4.69
1424 1460 1.827399 AAGTTGGGAGACGCGGTGAT 61.827 55.000 12.47 0.00 0.00 3.06
1474 1510 3.362014 CCAATATTGCGATGACGAGTTCG 60.362 47.826 10.11 0.00 46.33 3.95
1620 1665 2.158971 TGTGTAACTGCAGCAAGAGTCA 60.159 45.455 15.27 2.11 38.04 3.41
1632 1677 5.122869 GCAGCAAGAGTCAATAGTCATTTCA 59.877 40.000 0.00 0.00 0.00 2.69
1664 1709 5.941788 ACTCCTCGAAATTAATAAGCCCAT 58.058 37.500 0.00 0.00 0.00 4.00
1694 1739 5.447624 TCACTGAACTATGAAAGACGTGA 57.552 39.130 0.00 0.00 0.00 4.35
1698 1743 5.047306 ACTGAACTATGAAAGACGTGATGGA 60.047 40.000 0.00 0.00 0.00 3.41
1737 1782 6.790285 ATGGATTTGTTTTTGTGCTGATTC 57.210 33.333 0.00 0.00 0.00 2.52
1739 1784 6.347696 TGGATTTGTTTTTGTGCTGATTCTT 58.652 32.000 0.00 0.00 0.00 2.52
1741 1786 6.293027 GGATTTGTTTTTGTGCTGATTCTTGG 60.293 38.462 0.00 0.00 0.00 3.61
1744 1789 5.108517 TGTTTTTGTGCTGATTCTTGGAAC 58.891 37.500 0.00 0.00 0.00 3.62
1745 1790 5.105392 TGTTTTTGTGCTGATTCTTGGAACT 60.105 36.000 0.00 0.00 0.00 3.01
1746 1791 6.096141 TGTTTTTGTGCTGATTCTTGGAACTA 59.904 34.615 0.00 0.00 0.00 2.24
1747 1792 6.899393 TTTTGTGCTGATTCTTGGAACTAT 57.101 33.333 0.00 0.00 0.00 2.12
1748 1793 5.885230 TTGTGCTGATTCTTGGAACTATG 57.115 39.130 0.00 0.00 0.00 2.23
1749 1794 5.164620 TGTGCTGATTCTTGGAACTATGA 57.835 39.130 0.00 0.00 0.00 2.15
1751 1796 6.003326 TGTGCTGATTCTTGGAACTATGAAA 58.997 36.000 0.00 0.00 0.00 2.69
1752 1797 6.489700 TGTGCTGATTCTTGGAACTATGAAAA 59.510 34.615 0.00 0.00 0.00 2.29
1753 1798 7.014134 TGTGCTGATTCTTGGAACTATGAAAAA 59.986 33.333 0.00 0.00 0.00 1.94
1754 1799 7.327032 GTGCTGATTCTTGGAACTATGAAAAAC 59.673 37.037 0.00 0.00 0.00 2.43
1869 3027 7.754851 TTTGAACCCTACCAGTATTTCTTTC 57.245 36.000 0.00 0.00 0.00 2.62
1875 3033 4.081309 CCTACCAGTATTTCTTTCGTCCCA 60.081 45.833 0.00 0.00 0.00 4.37
1891 3049 2.691526 GTCCCAAAAGAAACCGAAACCT 59.308 45.455 0.00 0.00 0.00 3.50
1924 3082 7.993183 TCAACTAGAGAATTTCCTTTCAGTGTT 59.007 33.333 0.00 0.00 0.00 3.32
1925 3083 8.624776 CAACTAGAGAATTTCCTTTCAGTGTTT 58.375 33.333 0.00 0.00 0.00 2.83
2086 3255 4.761975 ACTAAGAGTGTTCGTTGTTTGGA 58.238 39.130 0.00 0.00 0.00 3.53
2088 3257 4.813296 AAGAGTGTTCGTTGTTTGGATC 57.187 40.909 0.00 0.00 0.00 3.36
2097 3266 3.830178 TCGTTGTTTGGATCTGTCTAGGA 59.170 43.478 0.00 0.00 0.00 2.94
2098 3267 4.466370 TCGTTGTTTGGATCTGTCTAGGAT 59.534 41.667 0.00 0.00 0.00 3.24
2150 3319 6.596888 ACATCTAAGTGACTGGATCAAACATG 59.403 38.462 0.00 0.00 39.72 3.21
2170 3339 9.591792 AAACATGAAAAGGAAAAGAAAAGAGAG 57.408 29.630 0.00 0.00 0.00 3.20
2174 3343 8.000780 TGAAAAGGAAAAGAAAAGAGAGAAGG 57.999 34.615 0.00 0.00 0.00 3.46
2184 3358 6.176896 AGAAAAGAGAGAAGGAAATACCAGC 58.823 40.000 0.00 0.00 42.04 4.85
2197 3371 5.880332 GGAAATACCAGCTCAAATCTACACA 59.120 40.000 0.00 0.00 38.79 3.72
2206 3380 8.461222 CCAGCTCAAATCTACACATAAAATCAA 58.539 33.333 0.00 0.00 0.00 2.57
2215 3389 8.662781 TCTACACATAAAATCAATGGTAGAGC 57.337 34.615 0.00 0.00 35.07 4.09
2216 3390 6.363577 ACACATAAAATCAATGGTAGAGCG 57.636 37.500 0.00 0.00 0.00 5.03
2217 3391 5.296780 ACACATAAAATCAATGGTAGAGCGG 59.703 40.000 0.00 0.00 0.00 5.52
2218 3392 4.275936 ACATAAAATCAATGGTAGAGCGGC 59.724 41.667 0.00 0.00 0.00 6.53
2219 3393 2.418368 AAATCAATGGTAGAGCGGCA 57.582 45.000 1.45 0.00 0.00 5.69
2220 3394 1.668419 AATCAATGGTAGAGCGGCAC 58.332 50.000 1.45 0.00 0.00 5.01
2221 3395 0.541392 ATCAATGGTAGAGCGGCACA 59.459 50.000 1.45 0.00 0.00 4.57
2222 3396 0.541392 TCAATGGTAGAGCGGCACAT 59.459 50.000 1.45 0.00 0.00 3.21
2223 3397 0.940126 CAATGGTAGAGCGGCACATC 59.060 55.000 1.45 0.00 0.00 3.06
2229 3424 2.352225 GGTAGAGCGGCACATCTAGATG 60.352 54.545 27.63 27.63 44.15 2.90
2243 3438 6.150738 CATCTAGATGTGCTTTAGCGATTC 57.849 41.667 22.42 0.00 45.83 2.52
2282 3477 5.952347 AGTTTTATCAAATTCCCTGTCCCTC 59.048 40.000 0.00 0.00 0.00 4.30
2310 3505 6.500684 TGGATAGAGTGTTTCAAGATTTGC 57.499 37.500 0.00 0.00 0.00 3.68
2312 3507 3.904136 AGAGTGTTTCAAGATTTGCGG 57.096 42.857 0.00 0.00 0.00 5.69
2345 3541 0.179045 AGCTGAGCGGTTGTTGTTCT 60.179 50.000 0.00 0.00 0.00 3.01
2351 3547 3.690139 TGAGCGGTTGTTGTTCTGTTTTA 59.310 39.130 0.00 0.00 0.00 1.52
2356 3552 5.051973 GCGGTTGTTGTTCTGTTTTATTGTC 60.052 40.000 0.00 0.00 0.00 3.18
2363 3559 5.626142 TGTTCTGTTTTATTGTCTGGGCTA 58.374 37.500 0.00 0.00 0.00 3.93
2364 3560 6.065374 TGTTCTGTTTTATTGTCTGGGCTAA 58.935 36.000 0.00 0.00 0.00 3.09
2370 3566 8.644374 TGTTTTATTGTCTGGGCTAATTTAGT 57.356 30.769 5.38 0.00 0.00 2.24
2378 3574 4.534500 TCTGGGCTAATTTAGTTGACCTGA 59.466 41.667 5.38 8.77 0.00 3.86
2423 3619 7.201679 GCTATATCTTGCTTGTTGTGAGACATT 60.202 37.037 0.00 0.00 0.00 2.71
2430 3626 0.883833 GTTGTGAGACATTGCCCCAG 59.116 55.000 0.00 0.00 0.00 4.45
2434 3630 1.133976 GTGAGACATTGCCCCAGCTAT 60.134 52.381 0.00 0.00 40.80 2.97
2479 3675 2.766263 CCAGTCCAACACTATAGCTCCA 59.234 50.000 0.00 0.00 32.21 3.86
2504 3700 3.558033 AGCGGTTTTGGGAAAGTTCTAA 58.442 40.909 0.00 0.00 0.00 2.10
2505 3701 4.149598 AGCGGTTTTGGGAAAGTTCTAAT 58.850 39.130 0.00 0.00 0.00 1.73
2506 3702 4.022329 AGCGGTTTTGGGAAAGTTCTAATG 60.022 41.667 0.00 0.00 0.00 1.90
2507 3703 4.261867 GCGGTTTTGGGAAAGTTCTAATGT 60.262 41.667 0.00 0.00 0.00 2.71
2508 3704 5.219633 CGGTTTTGGGAAAGTTCTAATGTG 58.780 41.667 0.00 0.00 0.00 3.21
2509 3705 5.221165 CGGTTTTGGGAAAGTTCTAATGTGT 60.221 40.000 0.00 0.00 0.00 3.72
2512 3708 3.670625 TGGGAAAGTTCTAATGTGTCGG 58.329 45.455 0.00 0.00 0.00 4.79
2513 3709 3.071892 TGGGAAAGTTCTAATGTGTCGGT 59.928 43.478 0.00 0.00 0.00 4.69
2514 3710 4.070009 GGGAAAGTTCTAATGTGTCGGTT 58.930 43.478 0.00 0.00 0.00 4.44
2515 3711 4.153655 GGGAAAGTTCTAATGTGTCGGTTC 59.846 45.833 0.00 0.00 0.00 3.62
2516 3712 4.143179 GGAAAGTTCTAATGTGTCGGTTCG 60.143 45.833 0.00 0.00 0.00 3.95
2517 3713 2.955614 AGTTCTAATGTGTCGGTTCGG 58.044 47.619 0.00 0.00 0.00 4.30
2518 3714 2.559668 AGTTCTAATGTGTCGGTTCGGA 59.440 45.455 0.00 0.00 0.00 4.55
2519 3715 2.642139 TCTAATGTGTCGGTTCGGAC 57.358 50.000 4.03 4.03 37.45 4.79
2520 3716 1.203052 TCTAATGTGTCGGTTCGGACC 59.797 52.381 1.39 1.39 42.87 4.46
2571 3787 8.770438 TTTTGCTTCTTTTGTTTCTACATGTT 57.230 26.923 2.30 0.00 33.44 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.953775 AACACTCACCGCCCCTGG 61.954 66.667 0.00 0.00 0.00 4.45
4 5 2.669569 CAACACTCACCGCCCCTG 60.670 66.667 0.00 0.00 0.00 4.45
5 6 3.953775 CCAACACTCACCGCCCCT 61.954 66.667 0.00 0.00 0.00 4.79
12 13 4.265056 ACCCCGGCCAACACTCAC 62.265 66.667 2.24 0.00 0.00 3.51
13 14 4.263572 CACCCCGGCCAACACTCA 62.264 66.667 2.24 0.00 0.00 3.41
14 15 2.969300 TTTCACCCCGGCCAACACTC 62.969 60.000 2.24 0.00 0.00 3.51
15 16 2.575455 TTTTCACCCCGGCCAACACT 62.575 55.000 2.24 0.00 0.00 3.55
16 17 2.128507 TTTTCACCCCGGCCAACAC 61.129 57.895 2.24 0.00 0.00 3.32
17 18 2.128507 GTTTTCACCCCGGCCAACA 61.129 57.895 2.24 0.00 0.00 3.33
18 19 2.732016 GTTTTCACCCCGGCCAAC 59.268 61.111 2.24 0.00 0.00 3.77
19 20 2.522193 GGTTTTCACCCCGGCCAA 60.522 61.111 2.24 0.00 37.03 4.52
20 21 3.801068 CTGGTTTTCACCCCGGCCA 62.801 63.158 2.24 0.00 43.49 5.36
21 22 2.989253 CTGGTTTTCACCCCGGCC 60.989 66.667 0.00 0.00 43.49 6.13
22 23 1.802337 GAACTGGTTTTCACCCCGGC 61.802 60.000 0.00 0.00 43.49 6.13
23 24 0.179001 AGAACTGGTTTTCACCCCGG 60.179 55.000 0.00 0.00 43.49 5.73
24 25 0.951558 CAGAACTGGTTTTCACCCCG 59.048 55.000 0.00 0.00 43.49 5.73
25 26 1.954382 GACAGAACTGGTTTTCACCCC 59.046 52.381 6.76 0.00 43.49 4.95
26 27 2.932261 AGACAGAACTGGTTTTCACCC 58.068 47.619 6.76 0.00 43.49 4.61
27 28 3.002348 CGAAGACAGAACTGGTTTTCACC 59.998 47.826 6.76 0.00 44.56 4.02
28 29 3.002348 CCGAAGACAGAACTGGTTTTCAC 59.998 47.826 6.76 0.00 34.19 3.18
29 30 3.202906 CCGAAGACAGAACTGGTTTTCA 58.797 45.455 6.76 0.00 34.19 2.69
30 31 2.548480 CCCGAAGACAGAACTGGTTTTC 59.452 50.000 6.76 6.11 34.19 2.29
31 32 2.572290 CCCGAAGACAGAACTGGTTTT 58.428 47.619 6.76 0.00 34.19 2.43
32 33 1.814248 GCCCGAAGACAGAACTGGTTT 60.814 52.381 6.76 0.57 34.19 3.27
33 34 0.250338 GCCCGAAGACAGAACTGGTT 60.250 55.000 6.76 0.00 34.19 3.67
34 35 1.371558 GCCCGAAGACAGAACTGGT 59.628 57.895 6.76 0.00 34.19 4.00
35 36 0.671781 CTGCCCGAAGACAGAACTGG 60.672 60.000 6.76 0.00 34.20 4.00
36 37 0.671781 CCTGCCCGAAGACAGAACTG 60.672 60.000 0.00 0.00 34.20 3.16
37 38 1.674057 CCTGCCCGAAGACAGAACT 59.326 57.895 0.00 0.00 34.20 3.01
38 39 2.035442 GCCTGCCCGAAGACAGAAC 61.035 63.158 0.00 0.00 34.20 3.01
39 40 2.347490 GCCTGCCCGAAGACAGAA 59.653 61.111 0.00 0.00 34.20 3.02
40 41 3.706373 GGCCTGCCCGAAGACAGA 61.706 66.667 0.00 0.00 34.20 3.41
62 63 4.736896 AGGGAACGAACTCGCCGC 62.737 66.667 0.00 0.54 44.43 6.53
63 64 2.048503 AAGGGAACGAACTCGCCG 60.049 61.111 0.00 0.00 44.43 6.46
64 65 0.320508 AAGAAGGGAACGAACTCGCC 60.321 55.000 0.00 0.00 44.43 5.54
65 66 0.790814 CAAGAAGGGAACGAACTCGC 59.209 55.000 0.00 0.00 44.43 5.03
66 67 2.433868 TCAAGAAGGGAACGAACTCG 57.566 50.000 0.00 0.00 46.33 4.18
78 79 2.730672 CGACGCCGCCTTCAAGAAG 61.731 63.158 2.83 2.83 38.14 2.85
79 80 2.736995 CGACGCCGCCTTCAAGAA 60.737 61.111 0.00 0.00 0.00 2.52
90 91 4.814294 AATGAGGACCGCGACGCC 62.814 66.667 15.34 5.60 0.00 5.68
91 92 3.554692 CAATGAGGACCGCGACGC 61.555 66.667 8.23 10.49 0.00 5.19
92 93 3.554692 GCAATGAGGACCGCGACG 61.555 66.667 8.23 0.00 0.00 5.12
93 94 3.195698 GGCAATGAGGACCGCGAC 61.196 66.667 8.23 0.17 0.00 5.19
94 95 4.467084 GGGCAATGAGGACCGCGA 62.467 66.667 8.23 0.00 0.00 5.87
95 96 4.776322 TGGGCAATGAGGACCGCG 62.776 66.667 0.00 0.00 39.59 6.46
96 97 1.754234 AATGGGCAATGAGGACCGC 60.754 57.895 0.00 0.00 39.59 5.68
97 98 0.680921 ACAATGGGCAATGAGGACCG 60.681 55.000 0.00 0.00 39.59 4.79
98 99 0.819582 CACAATGGGCAATGAGGACC 59.180 55.000 0.00 0.00 36.06 4.46
99 100 1.549203 ACACAATGGGCAATGAGGAC 58.451 50.000 0.00 0.00 0.00 3.85
100 101 1.894466 CAACACAATGGGCAATGAGGA 59.106 47.619 0.00 0.00 0.00 3.71
101 102 1.673626 GCAACACAATGGGCAATGAGG 60.674 52.381 0.00 0.00 0.00 3.86
102 103 1.274167 AGCAACACAATGGGCAATGAG 59.726 47.619 0.00 0.00 0.00 2.90
103 104 1.273048 GAGCAACACAATGGGCAATGA 59.727 47.619 0.00 0.00 0.00 2.57
104 105 1.673626 GGAGCAACACAATGGGCAATG 60.674 52.381 0.00 0.00 0.00 2.82
105 106 0.609662 GGAGCAACACAATGGGCAAT 59.390 50.000 0.00 0.00 0.00 3.56
106 107 0.758310 TGGAGCAACACAATGGGCAA 60.758 50.000 0.00 0.00 0.00 4.52
107 108 1.152589 TGGAGCAACACAATGGGCA 60.153 52.632 0.00 0.00 0.00 5.36
108 109 1.588082 CTGGAGCAACACAATGGGC 59.412 57.895 0.00 0.00 0.00 5.36
109 110 1.252904 CCCTGGAGCAACACAATGGG 61.253 60.000 0.00 0.00 0.00 4.00
110 111 1.252904 CCCCTGGAGCAACACAATGG 61.253 60.000 0.00 0.00 0.00 3.16
111 112 0.251297 TCCCCTGGAGCAACACAATG 60.251 55.000 0.00 0.00 0.00 2.82
112 113 0.482446 TTCCCCTGGAGCAACACAAT 59.518 50.000 0.00 0.00 31.21 2.71
113 114 0.260230 TTTCCCCTGGAGCAACACAA 59.740 50.000 0.00 0.00 31.21 3.33
114 115 0.467290 GTTTCCCCTGGAGCAACACA 60.467 55.000 0.00 0.00 31.21 3.72
115 116 1.179174 GGTTTCCCCTGGAGCAACAC 61.179 60.000 0.00 0.00 31.21 3.32
116 117 1.152830 GGTTTCCCCTGGAGCAACA 59.847 57.895 0.00 0.00 31.21 3.33
117 118 4.097218 GGTTTCCCCTGGAGCAAC 57.903 61.111 0.00 0.00 31.21 4.17
127 128 1.077716 CCACGGATCAGGGTTTCCC 60.078 63.158 0.00 0.00 45.90 3.97
128 129 0.546598 ATCCACGGATCAGGGTTTCC 59.453 55.000 0.00 0.00 0.00 3.13
153 154 4.767255 CACCAGAGCTCCGCCACC 62.767 72.222 10.93 0.00 0.00 4.61
154 155 3.941657 GACACCAGAGCTCCGCCAC 62.942 68.421 10.93 0.00 0.00 5.01
155 156 3.695606 GACACCAGAGCTCCGCCA 61.696 66.667 10.93 0.00 0.00 5.69
156 157 3.023949 ATGACACCAGAGCTCCGCC 62.024 63.158 10.93 0.00 0.00 6.13
157 158 1.812922 CATGACACCAGAGCTCCGC 60.813 63.158 10.93 0.00 0.00 5.54
158 159 0.459237 GACATGACACCAGAGCTCCG 60.459 60.000 10.93 0.00 0.00 4.63
159 160 0.107945 GGACATGACACCAGAGCTCC 60.108 60.000 10.93 0.00 0.00 4.70
160 161 0.901124 AGGACATGACACCAGAGCTC 59.099 55.000 5.27 5.27 0.00 4.09
161 162 1.277557 GAAGGACATGACACCAGAGCT 59.722 52.381 0.00 0.00 0.00 4.09
162 163 1.677217 GGAAGGACATGACACCAGAGC 60.677 57.143 0.00 0.00 0.00 4.09
163 164 1.905215 AGGAAGGACATGACACCAGAG 59.095 52.381 0.00 0.00 0.00 3.35
164 165 1.625315 CAGGAAGGACATGACACCAGA 59.375 52.381 0.00 0.00 31.40 3.86
165 166 1.625315 TCAGGAAGGACATGACACCAG 59.375 52.381 0.00 0.00 34.30 4.00
166 167 1.728323 TCAGGAAGGACATGACACCA 58.272 50.000 0.00 0.00 34.30 4.17
167 168 2.704572 CTTCAGGAAGGACATGACACC 58.295 52.381 0.00 0.00 39.05 4.16
178 179 4.803908 GGCGGCCCCTTCAGGAAG 62.804 72.222 8.12 2.01 38.24 3.46
192 193 3.883744 AACCGTGAGCTCCAAGGCG 62.884 63.158 12.15 7.88 46.59 5.52
193 194 2.032681 AACCGTGAGCTCCAAGGC 59.967 61.111 12.15 0.00 46.59 4.35
195 196 1.006102 ACGAACCGTGAGCTCCAAG 60.006 57.895 12.15 1.57 39.18 3.61
196 197 1.006571 GACGAACCGTGAGCTCCAA 60.007 57.895 12.15 0.00 41.37 3.53
197 198 2.649034 GACGAACCGTGAGCTCCA 59.351 61.111 12.15 0.00 41.37 3.86
198 199 1.915614 TACGACGAACCGTGAGCTCC 61.916 60.000 12.15 1.40 41.37 4.70
199 200 0.098376 ATACGACGAACCGTGAGCTC 59.902 55.000 6.82 6.82 41.37 4.09
200 201 0.179171 CATACGACGAACCGTGAGCT 60.179 55.000 0.00 0.00 41.37 4.09
201 202 0.455633 ACATACGACGAACCGTGAGC 60.456 55.000 0.00 0.00 41.37 4.26
202 203 1.256652 CACATACGACGAACCGTGAG 58.743 55.000 0.00 6.97 41.37 3.51
203 204 0.109643 CCACATACGACGAACCGTGA 60.110 55.000 0.00 0.00 41.37 4.35
204 205 1.680105 GCCACATACGACGAACCGTG 61.680 60.000 0.00 3.26 41.37 4.94
205 206 1.444895 GCCACATACGACGAACCGT 60.445 57.895 0.00 0.00 45.10 4.83
206 207 0.734942 AAGCCACATACGACGAACCG 60.735 55.000 0.00 0.00 0.00 4.44
207 208 0.997196 GAAGCCACATACGACGAACC 59.003 55.000 0.00 0.00 0.00 3.62
208 209 0.638746 CGAAGCCACATACGACGAAC 59.361 55.000 0.00 0.00 0.00 3.95
209 210 0.241749 ACGAAGCCACATACGACGAA 59.758 50.000 0.00 0.00 0.00 3.85
210 211 0.179181 GACGAAGCCACATACGACGA 60.179 55.000 0.00 0.00 0.00 4.20
211 212 0.179171 AGACGAAGCCACATACGACG 60.179 55.000 0.00 0.00 0.00 5.12
212 213 1.132643 AGAGACGAAGCCACATACGAC 59.867 52.381 0.00 0.00 0.00 4.34
213 214 1.460504 AGAGACGAAGCCACATACGA 58.539 50.000 0.00 0.00 0.00 3.43
214 215 2.186076 GAAGAGACGAAGCCACATACG 58.814 52.381 0.00 0.00 0.00 3.06
215 216 2.186076 CGAAGAGACGAAGCCACATAC 58.814 52.381 0.00 0.00 35.09 2.39
216 217 1.469251 GCGAAGAGACGAAGCCACATA 60.469 52.381 0.00 0.00 35.09 2.29
217 218 0.737715 GCGAAGAGACGAAGCCACAT 60.738 55.000 0.00 0.00 35.09 3.21
218 219 1.372997 GCGAAGAGACGAAGCCACA 60.373 57.895 0.00 0.00 35.09 4.17
219 220 2.437343 CGCGAAGAGACGAAGCCAC 61.437 63.158 0.00 0.00 35.09 5.01
220 221 2.126463 CGCGAAGAGACGAAGCCA 60.126 61.111 0.00 0.00 35.09 4.75
221 222 2.881352 CCGCGAAGAGACGAAGCC 60.881 66.667 8.23 0.00 35.09 4.35
222 223 2.126424 ACCGCGAAGAGACGAAGC 60.126 61.111 8.23 0.00 35.09 3.86
223 224 1.801913 CCACCGCGAAGAGACGAAG 60.802 63.158 8.23 0.00 35.09 3.79
224 225 2.257371 CCACCGCGAAGAGACGAA 59.743 61.111 8.23 0.00 35.09 3.85
225 226 2.981909 ACCACCGCGAAGAGACGA 60.982 61.111 8.23 0.00 35.09 4.20
226 227 2.805353 CACCACCGCGAAGAGACG 60.805 66.667 8.23 0.00 0.00 4.18
227 228 1.282930 GAACACCACCGCGAAGAGAC 61.283 60.000 8.23 0.00 0.00 3.36
228 229 1.006571 GAACACCACCGCGAAGAGA 60.007 57.895 8.23 0.00 0.00 3.10
229 230 1.300620 TGAACACCACCGCGAAGAG 60.301 57.895 8.23 0.00 0.00 2.85
230 231 1.593209 GTGAACACCACCGCGAAGA 60.593 57.895 8.23 0.00 39.86 2.87
231 232 2.935955 GTGAACACCACCGCGAAG 59.064 61.111 8.23 0.00 39.86 3.79
232 233 2.962786 CGTGAACACCACCGCGAA 60.963 61.111 8.23 0.00 42.76 4.70
233 234 4.953868 CCGTGAACACCACCGCGA 62.954 66.667 8.23 0.00 42.76 5.87
235 236 2.898343 AACCGTGAACACCACCGC 60.898 61.111 0.00 0.00 42.76 5.68
236 237 1.495584 CTCAACCGTGAACACCACCG 61.496 60.000 0.00 0.00 42.76 4.94
237 238 1.164041 CCTCAACCGTGAACACCACC 61.164 60.000 0.00 0.00 42.76 4.61
238 239 0.463116 ACCTCAACCGTGAACACCAC 60.463 55.000 0.00 0.00 42.30 4.16
239 240 0.179067 GACCTCAACCGTGAACACCA 60.179 55.000 0.00 0.00 31.88 4.17
240 241 0.883370 GGACCTCAACCGTGAACACC 60.883 60.000 0.00 0.00 31.88 4.16
241 242 0.883370 GGGACCTCAACCGTGAACAC 60.883 60.000 0.00 0.00 31.88 3.32
242 243 1.052124 AGGGACCTCAACCGTGAACA 61.052 55.000 0.00 0.00 31.88 3.18
243 244 0.602905 CAGGGACCTCAACCGTGAAC 60.603 60.000 0.00 0.00 43.30 3.18
244 245 1.752198 CAGGGACCTCAACCGTGAA 59.248 57.895 0.00 0.00 43.30 3.18
245 246 2.214216 CCAGGGACCTCAACCGTGA 61.214 63.158 0.00 0.00 43.30 4.35
246 247 1.189524 TACCAGGGACCTCAACCGTG 61.190 60.000 0.00 0.00 41.24 4.94
247 248 0.903454 CTACCAGGGACCTCAACCGT 60.903 60.000 0.00 0.00 0.00 4.83
248 249 1.898154 CTACCAGGGACCTCAACCG 59.102 63.158 0.00 0.00 0.00 4.44
249 250 0.910088 AGCTACCAGGGACCTCAACC 60.910 60.000 0.00 0.00 0.00 3.77
250 251 0.537653 GAGCTACCAGGGACCTCAAC 59.462 60.000 0.00 0.00 0.00 3.18
251 252 0.413832 AGAGCTACCAGGGACCTCAA 59.586 55.000 0.00 0.00 0.00 3.02
252 253 0.413832 AAGAGCTACCAGGGACCTCA 59.586 55.000 0.00 0.00 0.00 3.86
253 254 0.827368 CAAGAGCTACCAGGGACCTC 59.173 60.000 0.00 0.00 0.00 3.85
254 255 0.618968 CCAAGAGCTACCAGGGACCT 60.619 60.000 0.00 0.00 0.00 3.85
255 256 0.617820 TCCAAGAGCTACCAGGGACC 60.618 60.000 0.00 0.00 0.00 4.46
256 257 0.827368 CTCCAAGAGCTACCAGGGAC 59.173 60.000 0.00 0.00 0.00 4.46
257 258 3.306902 CTCCAAGAGCTACCAGGGA 57.693 57.895 0.00 0.00 0.00 4.20
267 268 1.202580 CCACCCTAATCGCTCCAAGAG 60.203 57.143 0.00 0.00 0.00 2.85
268 269 0.830648 CCACCCTAATCGCTCCAAGA 59.169 55.000 0.00 0.00 0.00 3.02
269 270 0.541863 ACCACCCTAATCGCTCCAAG 59.458 55.000 0.00 0.00 0.00 3.61
270 271 0.251916 CACCACCCTAATCGCTCCAA 59.748 55.000 0.00 0.00 0.00 3.53
271 272 0.907704 ACACCACCCTAATCGCTCCA 60.908 55.000 0.00 0.00 0.00 3.86
272 273 1.068741 CTACACCACCCTAATCGCTCC 59.931 57.143 0.00 0.00 0.00 4.70
273 274 1.755380 ACTACACCACCCTAATCGCTC 59.245 52.381 0.00 0.00 0.00 5.03
274 275 1.861982 ACTACACCACCCTAATCGCT 58.138 50.000 0.00 0.00 0.00 4.93
275 276 2.277084 CAACTACACCACCCTAATCGC 58.723 52.381 0.00 0.00 0.00 4.58
276 277 2.277084 GCAACTACACCACCCTAATCG 58.723 52.381 0.00 0.00 0.00 3.34
277 278 2.277084 CGCAACTACACCACCCTAATC 58.723 52.381 0.00 0.00 0.00 1.75
278 279 1.677820 GCGCAACTACACCACCCTAAT 60.678 52.381 0.30 0.00 0.00 1.73
279 280 0.320946 GCGCAACTACACCACCCTAA 60.321 55.000 0.30 0.00 0.00 2.69
280 281 1.189524 AGCGCAACTACACCACCCTA 61.190 55.000 11.47 0.00 0.00 3.53
281 282 2.032071 GCGCAACTACACCACCCT 59.968 61.111 0.30 0.00 0.00 4.34
282 283 2.032071 AGCGCAACTACACCACCC 59.968 61.111 11.47 0.00 0.00 4.61
283 284 0.882927 TTGAGCGCAACTACACCACC 60.883 55.000 11.47 0.00 0.00 4.61
284 285 2.612200 TTGAGCGCAACTACACCAC 58.388 52.632 11.47 0.00 0.00 4.16
293 294 2.753055 TACATAGGTGTTGAGCGCAA 57.247 45.000 11.47 0.00 39.77 4.85
294 295 2.430694 AGATACATAGGTGTTGAGCGCA 59.569 45.455 11.47 0.00 39.77 6.09
295 296 3.099267 AGATACATAGGTGTTGAGCGC 57.901 47.619 0.00 0.00 39.77 5.92
296 297 4.230657 GCTAGATACATAGGTGTTGAGCG 58.769 47.826 0.00 0.00 39.77 5.03
297 298 4.282195 AGGCTAGATACATAGGTGTTGAGC 59.718 45.833 0.00 0.00 39.77 4.26
298 299 6.040955 TCAAGGCTAGATACATAGGTGTTGAG 59.959 42.308 0.00 0.00 39.77 3.02
299 300 5.897250 TCAAGGCTAGATACATAGGTGTTGA 59.103 40.000 0.00 0.00 39.77 3.18
300 301 6.161855 TCAAGGCTAGATACATAGGTGTTG 57.838 41.667 0.00 0.00 39.77 3.33
301 302 5.900123 ACTCAAGGCTAGATACATAGGTGTT 59.100 40.000 0.00 0.00 39.77 3.32
302 303 5.303078 CACTCAAGGCTAGATACATAGGTGT 59.697 44.000 0.00 0.00 42.39 4.16
303 304 5.303078 ACACTCAAGGCTAGATACATAGGTG 59.697 44.000 0.00 0.00 0.00 4.00
304 305 5.303078 CACACTCAAGGCTAGATACATAGGT 59.697 44.000 0.00 0.00 0.00 3.08
305 306 5.303078 ACACACTCAAGGCTAGATACATAGG 59.697 44.000 0.00 0.00 0.00 2.57
306 307 6.212235 CACACACTCAAGGCTAGATACATAG 58.788 44.000 0.00 0.00 0.00 2.23
307 308 5.451937 GCACACACTCAAGGCTAGATACATA 60.452 44.000 0.00 0.00 0.00 2.29
308 309 4.681781 GCACACACTCAAGGCTAGATACAT 60.682 45.833 0.00 0.00 0.00 2.29
309 310 3.368427 GCACACACTCAAGGCTAGATACA 60.368 47.826 0.00 0.00 0.00 2.29
310 311 3.190874 GCACACACTCAAGGCTAGATAC 58.809 50.000 0.00 0.00 0.00 2.24
311 312 2.159240 CGCACACACTCAAGGCTAGATA 60.159 50.000 0.00 0.00 0.00 1.98
312 313 1.404717 CGCACACACTCAAGGCTAGAT 60.405 52.381 0.00 0.00 0.00 1.98
313 314 0.038251 CGCACACACTCAAGGCTAGA 60.038 55.000 0.00 0.00 0.00 2.43
314 315 0.319900 ACGCACACACTCAAGGCTAG 60.320 55.000 0.00 0.00 0.00 3.42
315 316 0.599991 CACGCACACACTCAAGGCTA 60.600 55.000 0.00 0.00 0.00 3.93
316 317 1.889105 CACGCACACACTCAAGGCT 60.889 57.895 0.00 0.00 0.00 4.58
317 318 2.180204 ACACGCACACACTCAAGGC 61.180 57.895 0.00 0.00 0.00 4.35
318 319 1.089481 ACACACGCACACACTCAAGG 61.089 55.000 0.00 0.00 0.00 3.61
319 320 0.726827 AACACACGCACACACTCAAG 59.273 50.000 0.00 0.00 0.00 3.02
320 321 0.445829 CAACACACGCACACACTCAA 59.554 50.000 0.00 0.00 0.00 3.02
321 322 1.365368 CCAACACACGCACACACTCA 61.365 55.000 0.00 0.00 0.00 3.41
322 323 1.351707 CCAACACACGCACACACTC 59.648 57.895 0.00 0.00 0.00 3.51
323 324 2.112198 CCCAACACACGCACACACT 61.112 57.895 0.00 0.00 0.00 3.55
324 325 2.407210 CCCAACACACGCACACAC 59.593 61.111 0.00 0.00 0.00 3.82
325 326 2.826287 CCCCAACACACGCACACA 60.826 61.111 0.00 0.00 0.00 3.72
326 327 2.826738 ACCCCAACACACGCACAC 60.827 61.111 0.00 0.00 0.00 3.82
327 328 2.826287 CACCCCAACACACGCACA 60.826 61.111 0.00 0.00 0.00 4.57
328 329 3.591835 CCACCCCAACACACGCAC 61.592 66.667 0.00 0.00 0.00 5.34
332 333 3.591835 CACGCCACCCCAACACAC 61.592 66.667 0.00 0.00 0.00 3.82
333 334 4.116585 ACACGCCACCCCAACACA 62.117 61.111 0.00 0.00 0.00 3.72
334 335 3.591835 CACACGCCACCCCAACAC 61.592 66.667 0.00 0.00 0.00 3.32
335 336 3.646942 AACACACGCCACCCCAACA 62.647 57.895 0.00 0.00 0.00 3.33
336 337 2.419739 AAACACACGCCACCCCAAC 61.420 57.895 0.00 0.00 0.00 3.77
337 338 2.043852 AAACACACGCCACCCCAA 60.044 55.556 0.00 0.00 0.00 4.12
338 339 2.266816 TACAAACACACGCCACCCCA 62.267 55.000 0.00 0.00 0.00 4.96
339 340 0.891904 ATACAAACACACGCCACCCC 60.892 55.000 0.00 0.00 0.00 4.95
340 341 0.519961 GATACAAACACACGCCACCC 59.480 55.000 0.00 0.00 0.00 4.61
341 342 0.165079 CGATACAAACACACGCCACC 59.835 55.000 0.00 0.00 0.00 4.61
342 343 1.136446 GTCGATACAAACACACGCCAC 60.136 52.381 0.00 0.00 0.00 5.01
343 344 1.141645 GTCGATACAAACACACGCCA 58.858 50.000 0.00 0.00 0.00 5.69
344 345 1.425412 AGTCGATACAAACACACGCC 58.575 50.000 0.00 0.00 0.00 5.68
345 346 2.220133 ACAAGTCGATACAAACACACGC 59.780 45.455 0.00 0.00 0.00 5.34
346 347 4.026393 TCAACAAGTCGATACAAACACACG 60.026 41.667 0.00 0.00 0.00 4.49
347 348 5.398176 TCAACAAGTCGATACAAACACAC 57.602 39.130 0.00 0.00 0.00 3.82
348 349 5.049749 CCATCAACAAGTCGATACAAACACA 60.050 40.000 0.00 0.00 0.00 3.72
349 350 5.049680 ACCATCAACAAGTCGATACAAACAC 60.050 40.000 0.00 0.00 0.00 3.32
350 351 5.060506 ACCATCAACAAGTCGATACAAACA 58.939 37.500 0.00 0.00 0.00 2.83
351 352 5.607119 ACCATCAACAAGTCGATACAAAC 57.393 39.130 0.00 0.00 0.00 2.93
352 353 7.915293 ATAACCATCAACAAGTCGATACAAA 57.085 32.000 0.00 0.00 0.00 2.83
353 354 7.625395 GCAATAACCATCAACAAGTCGATACAA 60.625 37.037 0.00 0.00 0.00 2.41
354 355 6.183360 GCAATAACCATCAACAAGTCGATACA 60.183 38.462 0.00 0.00 0.00 2.29
355 356 6.037172 AGCAATAACCATCAACAAGTCGATAC 59.963 38.462 0.00 0.00 0.00 2.24
356 357 6.112734 AGCAATAACCATCAACAAGTCGATA 58.887 36.000 0.00 0.00 0.00 2.92
357 358 4.943705 AGCAATAACCATCAACAAGTCGAT 59.056 37.500 0.00 0.00 0.00 3.59
358 359 4.323417 AGCAATAACCATCAACAAGTCGA 58.677 39.130 0.00 0.00 0.00 4.20
359 360 4.685169 AGCAATAACCATCAACAAGTCG 57.315 40.909 0.00 0.00 0.00 4.18
380 381 5.122711 GCTTTCGCCCGGCTTTATATATAAA 59.877 40.000 15.47 15.47 0.00 1.40
381 382 4.632688 GCTTTCGCCCGGCTTTATATATAA 59.367 41.667 8.05 0.81 0.00 0.98
382 383 4.186159 GCTTTCGCCCGGCTTTATATATA 58.814 43.478 8.05 0.00 0.00 0.86
383 384 3.007635 GCTTTCGCCCGGCTTTATATAT 58.992 45.455 8.05 0.00 0.00 0.86
384 385 2.419667 GCTTTCGCCCGGCTTTATATA 58.580 47.619 8.05 0.00 0.00 0.86
385 386 1.235724 GCTTTCGCCCGGCTTTATAT 58.764 50.000 8.05 0.00 0.00 0.86
386 387 2.697819 GCTTTCGCCCGGCTTTATA 58.302 52.632 8.05 0.00 0.00 0.98
387 388 3.509659 GCTTTCGCCCGGCTTTAT 58.490 55.556 8.05 0.00 0.00 1.40
395 396 6.588452 CTTTTATCCAAAAAGGCTTTCGCCC 61.588 44.000 13.76 0.00 41.81 6.13
396 397 4.388773 CTTTTATCCAAAAAGGCTTTCGCC 59.611 41.667 13.76 0.00 41.51 5.54
397 398 5.227152 TCTTTTATCCAAAAAGGCTTTCGC 58.773 37.500 13.76 0.00 37.72 4.70
398 399 7.651704 TCTTTCTTTTATCCAAAAAGGCTTTCG 59.348 33.333 13.76 7.62 37.72 3.46
399 400 8.887036 TCTTTCTTTTATCCAAAAAGGCTTTC 57.113 30.769 13.76 0.00 37.72 2.62
400 401 9.679661 TTTCTTTCTTTTATCCAAAAAGGCTTT 57.320 25.926 6.68 6.68 37.72 3.51
401 402 9.330063 CTTTCTTTCTTTTATCCAAAAAGGCTT 57.670 29.630 9.62 0.00 37.72 4.35
402 403 8.704668 TCTTTCTTTCTTTTATCCAAAAAGGCT 58.295 29.630 9.62 0.00 37.72 4.58
403 404 8.887036 TCTTTCTTTCTTTTATCCAAAAAGGC 57.113 30.769 9.62 0.00 37.72 4.35
429 430 6.407202 AGATGTACCGTATGAAGCTCTTTTT 58.593 36.000 0.00 0.00 0.00 1.94
430 431 5.978814 AGATGTACCGTATGAAGCTCTTTT 58.021 37.500 0.00 0.00 0.00 2.27
431 432 5.599999 AGATGTACCGTATGAAGCTCTTT 57.400 39.130 0.00 0.00 0.00 2.52
432 433 6.490381 TGATAGATGTACCGTATGAAGCTCTT 59.510 38.462 0.00 0.00 0.00 2.85
433 434 6.004574 TGATAGATGTACCGTATGAAGCTCT 58.995 40.000 0.00 0.00 0.00 4.09
434 435 6.149640 TCTGATAGATGTACCGTATGAAGCTC 59.850 42.308 0.00 0.00 0.00 4.09
435 436 6.004574 TCTGATAGATGTACCGTATGAAGCT 58.995 40.000 0.00 0.00 0.00 3.74
436 437 6.255596 TCTGATAGATGTACCGTATGAAGC 57.744 41.667 0.00 0.00 0.00 3.86
437 438 7.877003 AGTTCTGATAGATGTACCGTATGAAG 58.123 38.462 0.00 0.00 0.00 3.02
438 439 7.818997 AGTTCTGATAGATGTACCGTATGAA 57.181 36.000 0.00 0.00 0.00 2.57
439 440 8.373220 TCTAGTTCTGATAGATGTACCGTATGA 58.627 37.037 0.00 0.00 0.00 2.15
440 441 8.444715 GTCTAGTTCTGATAGATGTACCGTATG 58.555 40.741 0.00 0.00 32.15 2.39
441 442 8.155510 TGTCTAGTTCTGATAGATGTACCGTAT 58.844 37.037 0.00 0.00 32.15 3.06
442 443 7.503549 TGTCTAGTTCTGATAGATGTACCGTA 58.496 38.462 0.00 0.00 32.15 4.02
443 444 6.354938 TGTCTAGTTCTGATAGATGTACCGT 58.645 40.000 0.00 0.00 32.15 4.83
444 445 6.862711 TGTCTAGTTCTGATAGATGTACCG 57.137 41.667 0.00 0.00 32.15 4.02
445 446 8.630054 AGATGTCTAGTTCTGATAGATGTACC 57.370 38.462 0.00 0.00 32.15 3.34
446 447 8.726988 GGAGATGTCTAGTTCTGATAGATGTAC 58.273 40.741 0.00 0.00 32.15 2.90
447 448 7.885922 GGGAGATGTCTAGTTCTGATAGATGTA 59.114 40.741 0.00 0.00 32.15 2.29
448 449 6.719370 GGGAGATGTCTAGTTCTGATAGATGT 59.281 42.308 0.00 0.00 32.15 3.06
449 450 6.947733 AGGGAGATGTCTAGTTCTGATAGATG 59.052 42.308 0.00 0.00 32.15 2.90
450 451 6.947733 CAGGGAGATGTCTAGTTCTGATAGAT 59.052 42.308 0.00 0.00 32.15 1.98
451 452 6.126332 ACAGGGAGATGTCTAGTTCTGATAGA 60.126 42.308 0.00 0.00 0.00 1.98
452 453 6.016360 CACAGGGAGATGTCTAGTTCTGATAG 60.016 46.154 0.00 0.00 0.00 2.08
453 454 5.830457 CACAGGGAGATGTCTAGTTCTGATA 59.170 44.000 0.00 0.00 0.00 2.15
454 455 4.648762 CACAGGGAGATGTCTAGTTCTGAT 59.351 45.833 0.00 0.00 0.00 2.90
455 456 4.019858 CACAGGGAGATGTCTAGTTCTGA 58.980 47.826 0.00 0.00 0.00 3.27
456 457 4.019858 TCACAGGGAGATGTCTAGTTCTG 58.980 47.826 0.00 0.00 0.00 3.02
457 458 4.020543 GTCACAGGGAGATGTCTAGTTCT 58.979 47.826 0.00 0.00 0.00 3.01
458 459 4.020543 AGTCACAGGGAGATGTCTAGTTC 58.979 47.826 0.00 0.00 0.00 3.01
459 460 3.766591 CAGTCACAGGGAGATGTCTAGTT 59.233 47.826 0.00 0.00 0.00 2.24
460 461 3.245443 ACAGTCACAGGGAGATGTCTAGT 60.245 47.826 0.00 0.00 0.00 2.57
461 462 3.360867 ACAGTCACAGGGAGATGTCTAG 58.639 50.000 0.00 0.00 0.00 2.43
462 463 3.458044 ACAGTCACAGGGAGATGTCTA 57.542 47.619 0.00 0.00 0.00 2.59
463 464 2.317371 ACAGTCACAGGGAGATGTCT 57.683 50.000 0.00 0.00 0.00 3.41
464 465 3.739519 GCATACAGTCACAGGGAGATGTC 60.740 52.174 0.00 0.00 31.14 3.06
465 466 2.169352 GCATACAGTCACAGGGAGATGT 59.831 50.000 0.00 0.00 32.80 3.06
466 467 2.484417 GGCATACAGTCACAGGGAGATG 60.484 54.545 0.00 0.00 0.00 2.90
467 468 1.765314 GGCATACAGTCACAGGGAGAT 59.235 52.381 0.00 0.00 0.00 2.75
468 469 1.195115 GGCATACAGTCACAGGGAGA 58.805 55.000 0.00 0.00 0.00 3.71
469 470 0.179100 CGGCATACAGTCACAGGGAG 60.179 60.000 0.00 0.00 0.00 4.30
470 471 1.897423 CGGCATACAGTCACAGGGA 59.103 57.895 0.00 0.00 0.00 4.20
471 472 1.815421 GCGGCATACAGTCACAGGG 60.815 63.158 0.00 0.00 0.00 4.45
472 473 1.815421 GGCGGCATACAGTCACAGG 60.815 63.158 3.07 0.00 0.00 4.00
473 474 1.815421 GGGCGGCATACAGTCACAG 60.815 63.158 12.47 0.00 0.00 3.66
474 475 2.267642 GGGCGGCATACAGTCACA 59.732 61.111 12.47 0.00 0.00 3.58
475 476 2.106683 GTGGGCGGCATACAGTCAC 61.107 63.158 12.47 3.73 0.00 3.67
476 477 2.118233 TTGTGGGCGGCATACAGTCA 62.118 55.000 12.47 0.00 0.00 3.41
477 478 1.376683 TTGTGGGCGGCATACAGTC 60.377 57.895 12.47 0.00 0.00 3.51
478 479 1.674322 GTTGTGGGCGGCATACAGT 60.674 57.895 12.47 0.00 0.00 3.55
479 480 1.031571 ATGTTGTGGGCGGCATACAG 61.032 55.000 12.47 0.00 0.00 2.74
480 481 0.253327 TATGTTGTGGGCGGCATACA 59.747 50.000 12.47 12.83 0.00 2.29
481 482 1.604604 ATATGTTGTGGGCGGCATAC 58.395 50.000 12.47 10.06 0.00 2.39
482 483 3.712016 ATATATGTTGTGGGCGGCATA 57.288 42.857 12.47 0.00 0.00 3.14
483 484 2.584835 ATATATGTTGTGGGCGGCAT 57.415 45.000 12.47 0.00 0.00 4.40
484 485 3.712016 ATATATATGTTGTGGGCGGCA 57.288 42.857 12.47 0.00 0.00 5.69
485 486 3.128589 CCAATATATATGTTGTGGGCGGC 59.871 47.826 17.76 0.00 0.00 6.53
486 487 4.584874 TCCAATATATATGTTGTGGGCGG 58.415 43.478 17.76 5.01 0.00 6.13
487 488 5.245531 ACTCCAATATATATGTTGTGGGCG 58.754 41.667 17.76 5.58 0.00 6.13
488 489 7.524717 AAACTCCAATATATATGTTGTGGGC 57.475 36.000 17.76 0.00 0.00 5.36
489 490 9.231297 CCTAAACTCCAATATATATGTTGTGGG 57.769 37.037 17.76 12.64 0.00 4.61
502 503 9.535170 CCTAGACTCATATCCTAAACTCCAATA 57.465 37.037 0.00 0.00 0.00 1.90
503 504 7.456269 CCCTAGACTCATATCCTAAACTCCAAT 59.544 40.741 0.00 0.00 0.00 3.16
504 505 6.782988 CCCTAGACTCATATCCTAAACTCCAA 59.217 42.308 0.00 0.00 0.00 3.53
505 506 6.104243 TCCCTAGACTCATATCCTAAACTCCA 59.896 42.308 0.00 0.00 0.00 3.86
506 507 6.553857 TCCCTAGACTCATATCCTAAACTCC 58.446 44.000 0.00 0.00 0.00 3.85
507 508 6.152154 GCTCCCTAGACTCATATCCTAAACTC 59.848 46.154 0.00 0.00 0.00 3.01
508 509 6.014012 GCTCCCTAGACTCATATCCTAAACT 58.986 44.000 0.00 0.00 0.00 2.66
509 510 6.014012 AGCTCCCTAGACTCATATCCTAAAC 58.986 44.000 0.00 0.00 0.00 2.01
510 511 6.220881 AGCTCCCTAGACTCATATCCTAAA 57.779 41.667 0.00 0.00 0.00 1.85
511 512 5.869540 AGCTCCCTAGACTCATATCCTAA 57.130 43.478 0.00 0.00 0.00 2.69
512 513 5.869540 AAGCTCCCTAGACTCATATCCTA 57.130 43.478 0.00 0.00 0.00 2.94
513 514 4.757997 AAGCTCCCTAGACTCATATCCT 57.242 45.455 0.00 0.00 0.00 3.24
514 515 6.895204 AGAATAAGCTCCCTAGACTCATATCC 59.105 42.308 0.00 0.00 0.00 2.59
515 516 7.954666 AGAATAAGCTCCCTAGACTCATATC 57.045 40.000 0.00 0.00 0.00 1.63
516 517 8.734593 AAAGAATAAGCTCCCTAGACTCATAT 57.265 34.615 0.00 0.00 0.00 1.78
517 518 9.830186 ATAAAGAATAAGCTCCCTAGACTCATA 57.170 33.333 0.00 0.00 0.00 2.15
518 519 8.734593 ATAAAGAATAAGCTCCCTAGACTCAT 57.265 34.615 0.00 0.00 0.00 2.90
519 520 8.554490 AATAAAGAATAAGCTCCCTAGACTCA 57.446 34.615 0.00 0.00 0.00 3.41
520 521 9.839817 AAAATAAAGAATAAGCTCCCTAGACTC 57.160 33.333 0.00 0.00 0.00 3.36
521 522 9.620259 CAAAATAAAGAATAAGCTCCCTAGACT 57.380 33.333 0.00 0.00 0.00 3.24
522 523 8.346300 GCAAAATAAAGAATAAGCTCCCTAGAC 58.654 37.037 0.00 0.00 0.00 2.59
523 524 7.502561 GGCAAAATAAAGAATAAGCTCCCTAGA 59.497 37.037 0.00 0.00 0.00 2.43
524 525 7.503902 AGGCAAAATAAAGAATAAGCTCCCTAG 59.496 37.037 0.00 0.00 0.00 3.02
525 526 7.354312 AGGCAAAATAAAGAATAAGCTCCCTA 58.646 34.615 0.00 0.00 0.00 3.53
526 527 6.197903 AGGCAAAATAAAGAATAAGCTCCCT 58.802 36.000 0.00 0.00 0.00 4.20
527 528 6.471233 AGGCAAAATAAAGAATAAGCTCCC 57.529 37.500 0.00 0.00 0.00 4.30
528 529 7.921214 GGTAAGGCAAAATAAAGAATAAGCTCC 59.079 37.037 0.00 0.00 0.00 4.70
529 530 7.644157 CGGTAAGGCAAAATAAAGAATAAGCTC 59.356 37.037 0.00 0.00 0.00 4.09
530 531 7.416326 CCGGTAAGGCAAAATAAAGAATAAGCT 60.416 37.037 0.00 0.00 0.00 3.74
531 532 6.695713 CCGGTAAGGCAAAATAAAGAATAAGC 59.304 38.462 0.00 0.00 0.00 3.09
532 533 7.768240 ACCGGTAAGGCAAAATAAAGAATAAG 58.232 34.615 4.49 0.00 46.52 1.73
533 534 7.706100 ACCGGTAAGGCAAAATAAAGAATAA 57.294 32.000 4.49 0.00 46.52 1.40
534 535 7.177041 ACAACCGGTAAGGCAAAATAAAGAATA 59.823 33.333 8.00 0.00 46.52 1.75
535 536 6.014925 ACAACCGGTAAGGCAAAATAAAGAAT 60.015 34.615 8.00 0.00 46.52 2.40
536 537 5.302313 ACAACCGGTAAGGCAAAATAAAGAA 59.698 36.000 8.00 0.00 46.52 2.52
537 538 4.828387 ACAACCGGTAAGGCAAAATAAAGA 59.172 37.500 8.00 0.00 46.52 2.52
538 539 4.920927 CACAACCGGTAAGGCAAAATAAAG 59.079 41.667 8.00 0.00 46.52 1.85
539 540 4.583489 TCACAACCGGTAAGGCAAAATAAA 59.417 37.500 8.00 0.00 46.52 1.40
540 541 4.142790 TCACAACCGGTAAGGCAAAATAA 58.857 39.130 8.00 0.00 46.52 1.40
541 542 3.752665 TCACAACCGGTAAGGCAAAATA 58.247 40.909 8.00 0.00 46.52 1.40
542 543 2.588620 TCACAACCGGTAAGGCAAAAT 58.411 42.857 8.00 0.00 46.52 1.82
543 544 2.054232 TCACAACCGGTAAGGCAAAA 57.946 45.000 8.00 0.00 46.52 2.44
544 545 2.279935 ATCACAACCGGTAAGGCAAA 57.720 45.000 8.00 0.00 46.52 3.68
545 546 2.279935 AATCACAACCGGTAAGGCAA 57.720 45.000 8.00 0.00 46.52 4.52
546 547 2.279935 AAATCACAACCGGTAAGGCA 57.720 45.000 8.00 0.00 46.52 4.75
547 548 2.554893 TCAAAATCACAACCGGTAAGGC 59.445 45.455 8.00 0.00 46.52 4.35
549 550 3.252215 TGCTCAAAATCACAACCGGTAAG 59.748 43.478 8.00 6.45 0.00 2.34
550 551 3.215151 TGCTCAAAATCACAACCGGTAA 58.785 40.909 8.00 0.00 0.00 2.85
551 552 2.852449 TGCTCAAAATCACAACCGGTA 58.148 42.857 8.00 0.00 0.00 4.02
552 553 1.686355 TGCTCAAAATCACAACCGGT 58.314 45.000 0.00 0.00 0.00 5.28
553 554 2.030007 ACATGCTCAAAATCACAACCGG 60.030 45.455 0.00 0.00 0.00 5.28
554 555 3.287312 ACATGCTCAAAATCACAACCG 57.713 42.857 0.00 0.00 0.00 4.44
555 556 5.376854 AGTACATGCTCAAAATCACAACC 57.623 39.130 0.00 0.00 0.00 3.77
556 557 6.672147 AGAAGTACATGCTCAAAATCACAAC 58.328 36.000 0.00 0.00 0.00 3.32
557 558 6.882610 AGAAGTACATGCTCAAAATCACAA 57.117 33.333 0.00 0.00 0.00 3.33
558 559 6.882610 AAGAAGTACATGCTCAAAATCACA 57.117 33.333 0.00 0.00 0.00 3.58
559 560 8.579682 AAAAAGAAGTACATGCTCAAAATCAC 57.420 30.769 0.00 0.00 0.00 3.06
600 601 9.197694 AGTCATAAAAGTATTATAGCTCGCAAG 57.802 33.333 0.00 0.00 0.00 4.01
601 602 9.542462 AAGTCATAAAAGTATTATAGCTCGCAA 57.458 29.630 0.00 0.00 0.00 4.85
602 603 9.542462 AAAGTCATAAAAGTATTATAGCTCGCA 57.458 29.630 0.00 0.00 0.00 5.10
603 604 9.798885 CAAAGTCATAAAAGTATTATAGCTCGC 57.201 33.333 0.00 0.00 0.00 5.03
636 637 8.840321 GCAGCCATCTTATTGAATAGTCTTAAA 58.160 33.333 0.00 0.00 0.00 1.52
637 638 7.992608 TGCAGCCATCTTATTGAATAGTCTTAA 59.007 33.333 0.00 0.00 0.00 1.85
638 639 7.508687 TGCAGCCATCTTATTGAATAGTCTTA 58.491 34.615 0.00 0.00 0.00 2.10
639 640 6.359804 TGCAGCCATCTTATTGAATAGTCTT 58.640 36.000 0.00 0.00 0.00 3.01
640 641 5.933617 TGCAGCCATCTTATTGAATAGTCT 58.066 37.500 0.00 0.00 0.00 3.24
641 642 6.609533 CATGCAGCCATCTTATTGAATAGTC 58.390 40.000 0.00 0.00 0.00 2.59
642 643 5.048224 GCATGCAGCCATCTTATTGAATAGT 60.048 40.000 14.21 0.00 37.23 2.12
643 644 5.048294 TGCATGCAGCCATCTTATTGAATAG 60.048 40.000 18.46 0.00 44.83 1.73
644 645 4.828387 TGCATGCAGCCATCTTATTGAATA 59.172 37.500 18.46 0.00 44.83 1.75
645 646 3.639561 TGCATGCAGCCATCTTATTGAAT 59.360 39.130 18.46 0.00 44.83 2.57
646 647 3.025262 TGCATGCAGCCATCTTATTGAA 58.975 40.909 18.46 0.00 44.83 2.69
647 648 2.657143 TGCATGCAGCCATCTTATTGA 58.343 42.857 18.46 0.00 44.83 2.57
648 649 3.005367 TCATGCATGCAGCCATCTTATTG 59.995 43.478 26.69 14.73 44.83 1.90
649 650 3.227614 TCATGCATGCAGCCATCTTATT 58.772 40.909 26.69 1.43 44.83 1.40
650 651 2.871453 TCATGCATGCAGCCATCTTAT 58.129 42.857 26.69 2.26 44.83 1.73
651 652 2.351706 TCATGCATGCAGCCATCTTA 57.648 45.000 26.69 0.00 44.83 2.10
652 653 1.704641 ATCATGCATGCAGCCATCTT 58.295 45.000 26.69 3.94 44.83 2.40
653 654 1.704641 AATCATGCATGCAGCCATCT 58.295 45.000 26.69 4.78 44.83 2.90
654 655 3.192633 TCATAATCATGCATGCAGCCATC 59.807 43.478 26.69 0.00 44.83 3.51
655 656 3.161866 TCATAATCATGCATGCAGCCAT 58.838 40.909 26.69 14.11 44.83 4.40
656 657 2.588620 TCATAATCATGCATGCAGCCA 58.411 42.857 26.69 12.34 44.83 4.75
657 658 3.511699 CATCATAATCATGCATGCAGCC 58.488 45.455 26.69 0.00 44.83 4.85
658 659 2.923655 GCATCATAATCATGCATGCAGC 59.076 45.455 26.69 15.37 45.19 5.25
665 666 2.163815 GGCCTCTGCATCATAATCATGC 59.836 50.000 0.00 0.00 45.92 4.06
666 667 2.418976 CGGCCTCTGCATCATAATCATG 59.581 50.000 0.00 0.00 40.13 3.07
667 668 2.303890 TCGGCCTCTGCATCATAATCAT 59.696 45.455 0.00 0.00 40.13 2.45
668 669 1.693606 TCGGCCTCTGCATCATAATCA 59.306 47.619 0.00 0.00 40.13 2.57
669 670 2.344950 CTCGGCCTCTGCATCATAATC 58.655 52.381 0.00 0.00 40.13 1.75
670 671 1.002888 CCTCGGCCTCTGCATCATAAT 59.997 52.381 0.00 0.00 40.13 1.28
671 672 0.394192 CCTCGGCCTCTGCATCATAA 59.606 55.000 0.00 0.00 40.13 1.90
672 673 0.469892 TCCTCGGCCTCTGCATCATA 60.470 55.000 0.00 0.00 40.13 2.15
673 674 1.126329 ATCCTCGGCCTCTGCATCAT 61.126 55.000 0.00 0.00 40.13 2.45
674 675 0.469892 TATCCTCGGCCTCTGCATCA 60.470 55.000 0.00 0.00 40.13 3.07
675 676 0.037790 GTATCCTCGGCCTCTGCATC 60.038 60.000 0.00 0.00 40.13 3.91
676 677 1.810606 CGTATCCTCGGCCTCTGCAT 61.811 60.000 0.00 0.00 40.13 3.96
677 678 2.490148 CGTATCCTCGGCCTCTGCA 61.490 63.158 0.00 0.00 40.13 4.41
678 679 2.336809 CGTATCCTCGGCCTCTGC 59.663 66.667 0.00 0.00 0.00 4.26
679 680 2.336809 GCGTATCCTCGGCCTCTG 59.663 66.667 0.00 0.00 0.00 3.35
689 690 0.472471 TGGGAAATGGAGGCGTATCC 59.528 55.000 1.46 1.46 40.03 2.59
690 691 2.568623 ATGGGAAATGGAGGCGTATC 57.431 50.000 0.00 0.00 0.00 2.24
691 692 4.447138 TTTATGGGAAATGGAGGCGTAT 57.553 40.909 0.00 0.00 0.00 3.06
692 693 3.935818 TTTATGGGAAATGGAGGCGTA 57.064 42.857 0.00 0.00 0.00 4.42
693 694 2.818751 TTTATGGGAAATGGAGGCGT 57.181 45.000 0.00 0.00 0.00 5.68
711 712 8.225603 ACTCGATTCCAATATATGCTGTTTTT 57.774 30.769 0.00 0.00 0.00 1.94
712 713 7.807977 ACTCGATTCCAATATATGCTGTTTT 57.192 32.000 0.00 0.00 0.00 2.43
713 714 8.150945 AGTACTCGATTCCAATATATGCTGTTT 58.849 33.333 0.00 0.00 0.00 2.83
714 715 7.671302 AGTACTCGATTCCAATATATGCTGTT 58.329 34.615 0.00 0.00 0.00 3.16
974 1006 0.690762 TTGAACTGTAGGTGGAGGGC 59.309 55.000 0.00 0.00 0.00 5.19
977 1009 6.471233 TGATCTATTGAACTGTAGGTGGAG 57.529 41.667 0.00 0.00 0.00 3.86
1009 1041 4.588899 TGGGTTTCTGAGATGTTATGTGG 58.411 43.478 0.00 0.00 0.00 4.17
1037 1072 3.181493 CCTCATGGTTTTGCTGCTATGAC 60.181 47.826 0.00 0.00 0.00 3.06
1040 1076 1.753073 GCCTCATGGTTTTGCTGCTAT 59.247 47.619 0.00 0.00 35.27 2.97
1287 1323 1.838073 TTTCCTCGGCCTTCAGGGTC 61.838 60.000 11.36 0.00 37.43 4.46
1312 1348 2.545532 CGATGACCTGCTGGATCTTCTC 60.546 54.545 17.64 2.67 37.04 2.87
1368 1404 1.301716 GGCAGCCTTGTCGAACAGA 60.302 57.895 3.29 0.00 0.00 3.41
1474 1510 0.169009 GATTTCACGCCTGCCTTGAC 59.831 55.000 0.00 0.00 0.00 3.18
1540 1576 1.929836 CAGCTTCGTTACATCCAGAGC 59.070 52.381 0.00 0.00 0.00 4.09
1620 1665 7.395489 AGGAGTTTGCTCATTGAAATGACTATT 59.605 33.333 1.55 0.00 43.37 1.73
1632 1677 6.817765 TTAATTTCGAGGAGTTTGCTCATT 57.182 33.333 0.00 0.00 43.37 2.57
1694 1739 8.599624 ATCCATAGAAAAGAAATGTGTTCCAT 57.400 30.769 0.00 0.00 34.36 3.41
1714 1759 6.527423 AGAATCAGCACAAAAACAAATCCAT 58.473 32.000 0.00 0.00 0.00 3.41
1854 3012 5.486735 TTGGGACGAAAGAAATACTGGTA 57.513 39.130 0.00 0.00 0.00 3.25
1869 3027 2.542205 GGTTTCGGTTTCTTTTGGGACG 60.542 50.000 0.00 0.00 0.00 4.79
2056 3222 5.209818 ACGAACACTCTTAGTCATTGGAA 57.790 39.130 0.00 0.00 0.00 3.53
2067 3234 4.273480 CAGATCCAAACAACGAACACTCTT 59.727 41.667 0.00 0.00 0.00 2.85
2068 3235 3.809832 CAGATCCAAACAACGAACACTCT 59.190 43.478 0.00 0.00 0.00 3.24
2069 3236 3.560068 ACAGATCCAAACAACGAACACTC 59.440 43.478 0.00 0.00 0.00 3.51
2086 3255 8.811017 CCACATCTAAATGTATCCTAGACAGAT 58.189 37.037 0.00 0.00 44.41 2.90
2088 3257 7.957002 ACCACATCTAAATGTATCCTAGACAG 58.043 38.462 0.00 0.00 44.41 3.51
2150 3319 8.226819 TCCTTCTCTCTTTTCTTTTCCTTTTC 57.773 34.615 0.00 0.00 0.00 2.29
2170 3339 6.823689 TGTAGATTTGAGCTGGTATTTCCTTC 59.176 38.462 0.00 0.00 37.07 3.46
2174 3343 6.985188 TGTGTAGATTTGAGCTGGTATTTC 57.015 37.500 0.00 0.00 0.00 2.17
2197 3371 4.275936 GTGCCGCTCTACCATTGATTTTAT 59.724 41.667 0.00 0.00 0.00 1.40
2206 3380 1.615883 CTAGATGTGCCGCTCTACCAT 59.384 52.381 0.00 0.00 0.00 3.55
2220 3394 5.164109 CGAATCGCTAAAGCACATCTAGATG 60.164 44.000 27.63 27.63 42.21 2.90
2221 3395 4.920340 CGAATCGCTAAAGCACATCTAGAT 59.080 41.667 0.00 0.00 42.21 1.98
2222 3396 4.202020 ACGAATCGCTAAAGCACATCTAGA 60.202 41.667 1.15 0.00 42.21 2.43
2223 3397 4.045104 ACGAATCGCTAAAGCACATCTAG 58.955 43.478 1.15 0.00 42.21 2.43
2229 3424 2.875080 ACAACGAATCGCTAAAGCAC 57.125 45.000 1.15 0.00 42.21 4.40
2255 3450 6.661805 GGGACAGGGAATTTGATAAAACTGTA 59.338 38.462 0.00 0.00 37.98 2.74
2257 3452 5.716703 AGGGACAGGGAATTTGATAAAACTG 59.283 40.000 0.00 0.00 0.00 3.16
2261 3456 5.528600 TGAGGGACAGGGAATTTGATAAA 57.471 39.130 0.00 0.00 0.00 1.40
2264 3459 5.937492 ATATGAGGGACAGGGAATTTGAT 57.063 39.130 0.00 0.00 0.00 2.57
2269 3464 3.680169 TCCAATATGAGGGACAGGGAAT 58.320 45.455 0.00 0.00 0.00 3.01
2321 3516 2.063541 AACAACCGCTCAGCTTGTGC 62.064 55.000 5.11 0.00 40.05 4.57
2322 3517 0.317269 CAACAACCGCTCAGCTTGTG 60.317 55.000 5.11 0.00 0.00 3.33
2323 3518 0.748005 ACAACAACCGCTCAGCTTGT 60.748 50.000 0.00 0.00 0.00 3.16
2324 3519 0.381801 AACAACAACCGCTCAGCTTG 59.618 50.000 0.00 0.00 0.00 4.01
2325 3520 0.663153 GAACAACAACCGCTCAGCTT 59.337 50.000 0.00 0.00 0.00 3.74
2345 3541 8.644374 ACTAAATTAGCCCAGACAATAAAACA 57.356 30.769 0.00 0.00 0.00 2.83
2351 3547 5.652452 GGTCAACTAAATTAGCCCAGACAAT 59.348 40.000 0.00 0.00 0.00 2.71
2356 3552 4.636206 GTCAGGTCAACTAAATTAGCCCAG 59.364 45.833 0.00 0.00 0.00 4.45
2378 3574 4.579384 CCCACGCACAACCCTGGT 62.579 66.667 0.00 0.00 0.00 4.00
2423 3619 3.976593 CAGAGGATAGCTGGGGCA 58.023 61.111 0.00 0.00 41.70 5.36
2430 3626 2.072487 TGGTGCCCCAGAGGATAGC 61.072 63.158 0.00 0.00 38.24 2.97
2434 3630 0.474854 TTTAGTGGTGCCCCAGAGGA 60.475 55.000 0.00 0.00 42.94 3.71
2442 3638 0.953960 CTGGACCGTTTAGTGGTGCC 60.954 60.000 1.14 0.00 46.25 5.01
2479 3675 1.256812 CTTTCCCAAAACCGCTCCAT 58.743 50.000 0.00 0.00 0.00 3.41
2512 3708 2.291465 AGGTTTTAAAAGCGGTCCGAAC 59.709 45.455 17.49 8.33 41.06 3.95
2513 3709 2.574450 AGGTTTTAAAAGCGGTCCGAA 58.426 42.857 17.49 0.00 41.06 4.30
2514 3710 2.259266 AGGTTTTAAAAGCGGTCCGA 57.741 45.000 17.49 0.00 41.06 4.55
2515 3711 2.351060 GGAAGGTTTTAAAAGCGGTCCG 60.351 50.000 26.23 6.99 41.06 4.79
2516 3712 2.351060 CGGAAGGTTTTAAAAGCGGTCC 60.351 50.000 28.28 28.28 41.06 4.46
2517 3713 2.291465 ACGGAAGGTTTTAAAAGCGGTC 59.709 45.455 20.97 20.39 41.06 4.79
2518 3714 2.033675 CACGGAAGGTTTTAAAAGCGGT 59.966 45.455 20.97 14.62 41.06 5.68
2519 3715 2.033675 ACACGGAAGGTTTTAAAAGCGG 59.966 45.455 20.97 14.88 41.06 5.52
2520 3716 3.343380 ACACGGAAGGTTTTAAAAGCG 57.657 42.857 20.97 11.49 41.06 4.68
2521 3717 4.426416 ACAACACGGAAGGTTTTAAAAGC 58.574 39.130 19.94 19.94 36.69 3.51
2522 3718 8.637281 AATAACAACACGGAAGGTTTTAAAAG 57.363 30.769 0.00 0.00 0.00 2.27
2523 3719 8.999220 AAATAACAACACGGAAGGTTTTAAAA 57.001 26.923 0.00 0.00 0.00 1.52
2524 3720 8.870879 CAAAATAACAACACGGAAGGTTTTAAA 58.129 29.630 0.00 0.00 0.00 1.52
2525 3721 7.010275 GCAAAATAACAACACGGAAGGTTTTAA 59.990 33.333 0.00 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.