Multiple sequence alignment - TraesCS2B01G510100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G510100 chr2B 100.000 4234 0 0 1 4234 706266836 706271069 0.000000e+00 7819.0
1 TraesCS2B01G510100 chr2B 86.506 541 62 7 872 1412 706115252 706115781 6.100000e-163 584.0
2 TraesCS2B01G510100 chr2B 95.536 224 10 0 3505 3728 184384169 184383946 4.030000e-95 359.0
3 TraesCS2B01G510100 chr2A 95.983 1643 57 5 1867 3503 719469492 719471131 0.000000e+00 2660.0
4 TraesCS2B01G510100 chr2A 86.975 1190 69 41 664 1791 719467557 719468722 0.000000e+00 1260.0
5 TraesCS2B01G510100 chr2A 89.293 523 43 7 3721 4234 719471132 719471650 0.000000e+00 643.0
6 TraesCS2B01G510100 chr2A 92.217 424 27 4 961 1378 719473822 719474245 2.820000e-166 595.0
7 TraesCS2B01G510100 chr2A 87.085 542 41 10 112 631 719452577 719453111 1.700000e-163 586.0
8 TraesCS2B01G510100 chr2A 89.125 423 39 5 958 1378 719402445 719402862 1.740000e-143 520.0
9 TraesCS2B01G510100 chr2A 92.470 332 25 0 1047 1378 719319212 719319543 3.830000e-130 475.0
10 TraesCS2B01G510100 chr2A 91.453 117 8 2 1 116 719451743 719451858 4.380000e-35 159.0
11 TraesCS2B01G510100 chr2D 95.290 1656 51 4 1848 3503 585375659 585377287 0.000000e+00 2601.0
12 TraesCS2B01G510100 chr2D 90.592 861 44 17 688 1527 585368209 585369053 0.000000e+00 1107.0
13 TraesCS2B01G510100 chr2D 81.593 1331 231 9 1919 3242 585345162 585346485 0.000000e+00 1088.0
14 TraesCS2B01G510100 chr2D 91.188 522 34 4 3721 4234 585377288 585377805 0.000000e+00 699.0
15 TraesCS2B01G510100 chr2D 86.882 526 59 6 872 1397 585208974 585209489 7.890000e-162 580.0
16 TraesCS2B01G510100 chr2D 88.703 478 46 6 937 1412 585343997 585344468 1.020000e-160 577.0
17 TraesCS2B01G510100 chr2D 90.783 434 32 3 967 1395 585382650 585383080 1.320000e-159 573.0
18 TraesCS2B01G510100 chr2D 92.481 133 10 0 112 244 585349129 585349261 1.550000e-44 191.0
19 TraesCS2B01G510100 chr2D 96.825 63 2 0 381 443 585368129 585368191 5.790000e-19 106.0
20 TraesCS2B01G510100 chr6A 97.321 224 5 1 3505 3727 93079076 93079299 3.090000e-101 379.0
21 TraesCS2B01G510100 chr6A 96.429 224 7 1 3505 3727 40297518 40297741 6.690000e-98 368.0
22 TraesCS2B01G510100 chr6D 97.273 220 6 0 3505 3724 464693812 464694031 1.440000e-99 374.0
23 TraesCS2B01G510100 chr5B 97.674 215 5 0 3505 3719 682812607 682812393 1.860000e-98 370.0
24 TraesCS2B01G510100 chrUn 95.964 223 9 0 3505 3727 79329729 79329507 3.110000e-96 363.0
25 TraesCS2B01G510100 chr3B 95.982 224 8 1 3505 3727 82343659 82343882 3.110000e-96 363.0
26 TraesCS2B01G510100 chr1B 95.928 221 9 0 3506 3726 46085803 46086023 4.030000e-95 359.0
27 TraesCS2B01G510100 chr1A 95.536 224 9 1 3505 3727 36554584 36554807 1.450000e-94 357.0
28 TraesCS2B01G510100 chr4D 90.566 53 5 0 4 56 69746326 69746274 2.110000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G510100 chr2B 706266836 706271069 4233 False 7819.000000 7819 100.000000 1 4234 1 chr2B.!!$F2 4233
1 TraesCS2B01G510100 chr2B 706115252 706115781 529 False 584.000000 584 86.506000 872 1412 1 chr2B.!!$F1 540
2 TraesCS2B01G510100 chr2A 719467557 719474245 6688 False 1289.500000 2660 91.117000 664 4234 4 chr2A.!!$F4 3570
3 TraesCS2B01G510100 chr2A 719451743 719453111 1368 False 372.500000 586 89.269000 1 631 2 chr2A.!!$F3 630
4 TraesCS2B01G510100 chr2D 585375659 585377805 2146 False 1650.000000 2601 93.239000 1848 4234 2 chr2D.!!$F5 2386
5 TraesCS2B01G510100 chr2D 585343997 585349261 5264 False 618.666667 1088 87.592333 112 3242 3 chr2D.!!$F3 3130
6 TraesCS2B01G510100 chr2D 585368129 585369053 924 False 606.500000 1107 93.708500 381 1527 2 chr2D.!!$F4 1146
7 TraesCS2B01G510100 chr2D 585208974 585209489 515 False 580.000000 580 86.882000 872 1397 1 chr2D.!!$F1 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
526 1265 0.036577 GATGGCCGATCTGGATGAGG 60.037 60.0 0.0 0.0 42.00 3.86 F
664 1403 0.038310 GTTCCTGCCTAGCCTTGGTT 59.962 55.0 0.0 0.0 0.00 3.67 F
683 1422 0.178915 TCCCCCATACATAGTCCGGG 60.179 60.0 0.0 0.0 36.59 5.73 F
1415 2187 0.250234 CTCTGCTCCCATCGGTTGAA 59.750 55.0 0.0 0.0 0.00 2.69 F
2027 3851 0.252789 TTATGGGTCGGAAGGGGACA 60.253 55.0 0.0 0.0 36.12 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2430 4254 0.107508 ACACCATCTGGGATGCTTCG 60.108 55.000 0.54 0.00 41.15 3.79 R
2453 4277 3.449528 TCTTCATCATCGAGCTTGAGG 57.550 47.619 9.43 9.43 0.00 3.86 R
2811 4635 3.717350 GCACATGCAAAATCAAGAAGC 57.283 42.857 0.00 0.00 41.59 3.86 R
2833 4657 0.179029 AACCAAACCTCACCCTGTCG 60.179 55.000 0.00 0.00 0.00 4.35 R
3597 5452 0.108329 TGTAACTAGCCCGAGCAAGC 60.108 55.000 0.00 0.00 43.56 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 2.224818 ACATAGCCCTAGAGAGGTACCG 60.225 54.545 6.18 0.00 41.95 4.02
60 61 2.036862 AGAGAGGTACCGACAAACAACC 59.963 50.000 6.18 0.00 0.00 3.77
65 66 2.684374 GGTACCGACAAACAACCAAGTT 59.316 45.455 0.00 0.00 0.00 2.66
68 69 5.008911 GGTACCGACAAACAACCAAGTTAAT 59.991 40.000 0.00 0.00 0.00 1.40
71 72 3.733727 CGACAAACAACCAAGTTAATGGC 59.266 43.478 0.00 0.00 44.75 4.40
73 74 3.452627 ACAAACAACCAAGTTAATGGCCA 59.547 39.130 8.56 8.56 44.75 5.36
74 75 4.057432 CAAACAACCAAGTTAATGGCCAG 58.943 43.478 13.05 0.00 44.75 4.85
140 864 4.403453 GGATACGACAACATTGAGTTTGC 58.597 43.478 0.00 0.00 38.74 3.68
163 887 3.056328 GCCTGCCGGTCTCCAAAC 61.056 66.667 1.90 0.00 0.00 2.93
170 894 2.132762 GCCGGTCTCCAAACGTATATG 58.867 52.381 1.90 0.00 0.00 1.78
205 929 3.431912 TGCGTTGTGACAACTGATGATAC 59.568 43.478 24.09 6.64 0.00 2.24
246 970 7.497249 AGTTGCTCTTATGATTGAGTATCCAAC 59.503 37.037 0.00 0.00 33.71 3.77
253 977 4.439057 TGATTGAGTATCCAACGGCTTAC 58.561 43.478 0.00 0.00 31.87 2.34
255 979 1.483415 TGAGTATCCAACGGCTTACCC 59.517 52.381 0.00 0.00 0.00 3.69
256 980 1.483415 GAGTATCCAACGGCTTACCCA 59.517 52.381 0.00 0.00 0.00 4.51
268 992 2.728007 GCTTACCCAGCTTCCATTCTT 58.272 47.619 0.00 0.00 46.27 2.52
269 993 3.092301 GCTTACCCAGCTTCCATTCTTT 58.908 45.455 0.00 0.00 46.27 2.52
270 994 4.270008 GCTTACCCAGCTTCCATTCTTTA 58.730 43.478 0.00 0.00 46.27 1.85
378 1115 0.110104 CCTGCATCCCCTTCATCCTC 59.890 60.000 0.00 0.00 0.00 3.71
452 1191 4.267928 GCTTCCTTAATACTACGCACAGTG 59.732 45.833 0.00 0.00 0.00 3.66
454 1193 4.018490 TCCTTAATACTACGCACAGTGGA 58.982 43.478 1.84 0.00 35.12 4.02
455 1194 4.647853 TCCTTAATACTACGCACAGTGGAT 59.352 41.667 1.84 0.00 35.12 3.41
462 1201 1.807165 CGCACAGTGGATCTGACGG 60.807 63.158 1.84 0.00 46.27 4.79
464 1203 1.593787 CACAGTGGATCTGACGGCT 59.406 57.895 0.00 0.00 46.27 5.52
465 1204 0.738762 CACAGTGGATCTGACGGCTG 60.739 60.000 0.00 0.00 46.27 4.85
466 1205 1.812922 CAGTGGATCTGACGGCTGC 60.813 63.158 0.00 0.00 46.27 5.25
467 1206 2.512515 GTGGATCTGACGGCTGCC 60.513 66.667 9.11 9.11 0.00 4.85
468 1207 3.002583 TGGATCTGACGGCTGCCA 61.003 61.111 20.29 0.00 0.00 4.92
469 1208 2.369633 TGGATCTGACGGCTGCCAT 61.370 57.895 20.29 1.94 0.00 4.40
470 1209 1.890979 GGATCTGACGGCTGCCATG 60.891 63.158 20.29 5.70 0.00 3.66
471 1210 1.890979 GATCTGACGGCTGCCATGG 60.891 63.158 20.29 7.63 0.00 3.66
472 1211 4.783621 TCTGACGGCTGCCATGGC 62.784 66.667 30.54 30.54 42.35 4.40
509 1248 3.121030 GACCGCGTTGCAGCAGAT 61.121 61.111 4.92 0.00 36.85 2.90
510 1249 3.372676 GACCGCGTTGCAGCAGATG 62.373 63.158 4.92 0.00 36.85 2.90
511 1250 4.170062 CCGCGTTGCAGCAGATGG 62.170 66.667 4.92 0.00 36.85 3.51
512 1251 4.824166 CGCGTTGCAGCAGATGGC 62.824 66.667 0.00 0.00 45.30 4.40
513 1252 4.487412 GCGTTGCAGCAGATGGCC 62.487 66.667 0.00 0.00 46.50 5.36
514 1253 4.170062 CGTTGCAGCAGATGGCCG 62.170 66.667 0.00 0.00 46.50 6.13
515 1254 2.747460 GTTGCAGCAGATGGCCGA 60.747 61.111 0.00 0.00 46.50 5.54
516 1255 2.117156 GTTGCAGCAGATGGCCGAT 61.117 57.895 0.00 0.00 46.50 4.18
517 1256 1.820906 TTGCAGCAGATGGCCGATC 60.821 57.895 0.00 2.42 46.50 3.69
518 1257 2.110627 GCAGCAGATGGCCGATCT 59.889 61.111 10.78 10.78 46.50 2.75
524 1263 3.154278 AGATGGCCGATCTGGATGA 57.846 52.632 14.56 0.00 40.19 2.92
525 1264 0.975135 AGATGGCCGATCTGGATGAG 59.025 55.000 14.56 0.00 40.19 2.90
526 1265 0.036577 GATGGCCGATCTGGATGAGG 60.037 60.000 0.00 0.00 42.00 3.86
527 1266 1.486997 ATGGCCGATCTGGATGAGGG 61.487 60.000 0.00 0.00 42.00 4.30
528 1267 1.838846 GGCCGATCTGGATGAGGGA 60.839 63.158 7.64 0.00 42.00 4.20
529 1268 1.670590 GCCGATCTGGATGAGGGAG 59.329 63.158 7.64 0.00 42.00 4.30
530 1269 0.829602 GCCGATCTGGATGAGGGAGA 60.830 60.000 7.64 0.00 42.00 3.71
531 1270 1.709578 CCGATCTGGATGAGGGAGAA 58.290 55.000 0.00 0.00 42.00 2.87
532 1271 1.617850 CCGATCTGGATGAGGGAGAAG 59.382 57.143 0.00 0.00 42.00 2.85
533 1272 2.315176 CGATCTGGATGAGGGAGAAGT 58.685 52.381 0.00 0.00 0.00 3.01
534 1273 2.697751 CGATCTGGATGAGGGAGAAGTT 59.302 50.000 0.00 0.00 0.00 2.66
535 1274 3.891977 CGATCTGGATGAGGGAGAAGTTA 59.108 47.826 0.00 0.00 0.00 2.24
536 1275 4.342378 CGATCTGGATGAGGGAGAAGTTAA 59.658 45.833 0.00 0.00 0.00 2.01
537 1276 5.606505 GATCTGGATGAGGGAGAAGTTAAC 58.393 45.833 0.00 0.00 0.00 2.01
538 1277 4.689062 TCTGGATGAGGGAGAAGTTAACT 58.311 43.478 1.12 1.12 0.00 2.24
539 1278 4.467795 TCTGGATGAGGGAGAAGTTAACTG 59.532 45.833 9.34 0.00 0.00 3.16
540 1279 3.055094 TGGATGAGGGAGAAGTTAACTGC 60.055 47.826 9.34 7.28 0.00 4.40
541 1280 3.198853 GGATGAGGGAGAAGTTAACTGCT 59.801 47.826 16.48 16.48 33.57 4.24
542 1281 4.323868 GGATGAGGGAGAAGTTAACTGCTT 60.324 45.833 17.53 1.55 30.15 3.91
543 1282 4.273148 TGAGGGAGAAGTTAACTGCTTC 57.727 45.455 17.53 15.30 41.78 3.86
553 1292 7.444558 GAAGTTAACTGCTTCTTCGATCTAG 57.555 40.000 9.34 0.00 39.25 2.43
554 1293 6.518208 AGTTAACTGCTTCTTCGATCTAGT 57.482 37.500 7.48 0.00 0.00 2.57
555 1294 7.627298 AGTTAACTGCTTCTTCGATCTAGTA 57.373 36.000 7.48 0.00 0.00 1.82
556 1295 8.228035 AGTTAACTGCTTCTTCGATCTAGTAT 57.772 34.615 7.48 0.00 0.00 2.12
557 1296 8.688151 AGTTAACTGCTTCTTCGATCTAGTATT 58.312 33.333 7.48 0.00 0.00 1.89
558 1297 9.947669 GTTAACTGCTTCTTCGATCTAGTATTA 57.052 33.333 0.00 0.00 0.00 0.98
559 1298 9.947669 TTAACTGCTTCTTCGATCTAGTATTAC 57.052 33.333 0.00 0.00 0.00 1.89
560 1299 7.811117 ACTGCTTCTTCGATCTAGTATTACT 57.189 36.000 1.30 1.30 0.00 2.24
561 1300 8.905660 ACTGCTTCTTCGATCTAGTATTACTA 57.094 34.615 3.61 3.61 0.00 1.82
563 1302 8.325421 TGCTTCTTCGATCTAGTATTACTAGG 57.675 38.462 24.13 12.75 46.25 3.02
564 1303 7.937942 TGCTTCTTCGATCTAGTATTACTAGGT 59.062 37.037 24.13 20.04 44.39 3.08
565 1304 9.434420 GCTTCTTCGATCTAGTATTACTAGGTA 57.566 37.037 24.13 11.37 41.94 3.08
582 1321 7.715265 ACTAGGTATAAATGCTTCATTCACG 57.285 36.000 0.00 0.00 32.43 4.35
583 1322 7.497595 ACTAGGTATAAATGCTTCATTCACGA 58.502 34.615 0.00 0.00 32.43 4.35
584 1323 7.985184 ACTAGGTATAAATGCTTCATTCACGAA 59.015 33.333 0.00 0.00 32.43 3.85
585 1324 7.016361 AGGTATAAATGCTTCATTCACGAAC 57.984 36.000 0.00 0.00 32.43 3.95
586 1325 6.597672 AGGTATAAATGCTTCATTCACGAACA 59.402 34.615 0.00 0.00 32.43 3.18
587 1326 7.120579 AGGTATAAATGCTTCATTCACGAACAA 59.879 33.333 0.00 0.00 32.43 2.83
588 1327 7.915397 GGTATAAATGCTTCATTCACGAACAAT 59.085 33.333 0.00 0.00 32.43 2.71
589 1328 7.745022 ATAAATGCTTCATTCACGAACAATG 57.255 32.000 0.00 0.00 32.43 2.82
590 1329 3.557577 TGCTTCATTCACGAACAATGG 57.442 42.857 0.00 0.00 32.86 3.16
591 1330 2.253603 GCTTCATTCACGAACAATGGC 58.746 47.619 0.00 0.00 32.86 4.40
592 1331 2.095059 GCTTCATTCACGAACAATGGCT 60.095 45.455 0.00 0.00 32.86 4.75
593 1332 3.495193 CTTCATTCACGAACAATGGCTG 58.505 45.455 0.00 0.00 32.86 4.85
594 1333 2.503331 TCATTCACGAACAATGGCTGT 58.497 42.857 0.00 0.00 41.27 4.40
595 1334 2.483877 TCATTCACGAACAATGGCTGTC 59.516 45.455 0.00 0.00 37.23 3.51
596 1335 1.234821 TTCACGAACAATGGCTGTCC 58.765 50.000 0.00 0.00 37.23 4.02
607 1346 1.967319 TGGCTGTCCAGAGAAAACAC 58.033 50.000 0.00 0.00 37.47 3.32
608 1347 1.490490 TGGCTGTCCAGAGAAAACACT 59.510 47.619 0.00 0.00 37.47 3.55
609 1348 2.703536 TGGCTGTCCAGAGAAAACACTA 59.296 45.455 0.00 0.00 37.47 2.74
610 1349 3.244215 TGGCTGTCCAGAGAAAACACTAG 60.244 47.826 0.00 0.00 37.47 2.57
611 1350 2.739379 GCTGTCCAGAGAAAACACTAGC 59.261 50.000 0.00 0.00 0.00 3.42
612 1351 3.556004 GCTGTCCAGAGAAAACACTAGCT 60.556 47.826 0.00 0.00 0.00 3.32
613 1352 3.993081 CTGTCCAGAGAAAACACTAGCTG 59.007 47.826 0.00 0.00 0.00 4.24
614 1353 3.244215 TGTCCAGAGAAAACACTAGCTGG 60.244 47.826 0.00 0.00 43.20 4.85
615 1354 2.972713 TCCAGAGAAAACACTAGCTGGT 59.027 45.455 0.00 0.00 42.59 4.00
616 1355 3.070018 CCAGAGAAAACACTAGCTGGTG 58.930 50.000 26.79 26.79 42.34 4.17
617 1356 3.070018 CAGAGAAAACACTAGCTGGTGG 58.930 50.000 30.64 15.00 41.09 4.61
618 1357 1.807142 GAGAAAACACTAGCTGGTGGC 59.193 52.381 30.64 17.77 41.09 5.01
619 1358 1.142870 AGAAAACACTAGCTGGTGGCA 59.857 47.619 30.64 0.00 44.79 4.92
620 1359 2.162681 GAAAACACTAGCTGGTGGCAT 58.837 47.619 30.64 17.35 44.79 4.40
621 1360 3.009033 AGAAAACACTAGCTGGTGGCATA 59.991 43.478 30.64 0.00 44.79 3.14
622 1361 3.652057 AAACACTAGCTGGTGGCATAT 57.348 42.857 30.64 9.64 44.79 1.78
623 1362 4.771114 AAACACTAGCTGGTGGCATATA 57.229 40.909 30.64 0.00 44.79 0.86
624 1363 4.982241 AACACTAGCTGGTGGCATATAT 57.018 40.909 30.64 8.19 44.79 0.86
625 1364 6.433847 AAACACTAGCTGGTGGCATATATA 57.566 37.500 30.64 0.00 44.79 0.86
626 1365 6.433847 AACACTAGCTGGTGGCATATATAA 57.566 37.500 30.64 0.00 44.79 0.98
627 1366 6.433847 ACACTAGCTGGTGGCATATATAAA 57.566 37.500 30.64 0.00 44.79 1.40
628 1367 6.837312 ACACTAGCTGGTGGCATATATAAAA 58.163 36.000 30.64 0.00 44.79 1.52
629 1368 7.461749 ACACTAGCTGGTGGCATATATAAAAT 58.538 34.615 30.64 5.33 44.79 1.82
630 1369 7.391554 ACACTAGCTGGTGGCATATATAAAATG 59.608 37.037 30.64 3.65 44.79 2.32
631 1370 7.607607 CACTAGCTGGTGGCATATATAAAATGA 59.392 37.037 21.67 0.00 44.79 2.57
632 1371 8.163408 ACTAGCTGGTGGCATATATAAAATGAA 58.837 33.333 0.13 0.00 44.79 2.57
633 1372 7.838079 AGCTGGTGGCATATATAAAATGAAA 57.162 32.000 0.00 0.00 44.79 2.69
634 1373 8.248904 AGCTGGTGGCATATATAAAATGAAAA 57.751 30.769 0.00 0.00 44.79 2.29
635 1374 8.873144 AGCTGGTGGCATATATAAAATGAAAAT 58.127 29.630 0.00 0.00 44.79 1.82
636 1375 9.492973 GCTGGTGGCATATATAAAATGAAAATT 57.507 29.630 0.00 0.00 41.35 1.82
638 1377 9.775854 TGGTGGCATATATAAAATGAAAATTGG 57.224 29.630 0.00 0.00 0.00 3.16
639 1378 9.777297 GGTGGCATATATAAAATGAAAATTGGT 57.223 29.630 0.00 0.00 0.00 3.67
651 1390 9.492973 AAAATGAAAATTGGTTAGATGTTCCTG 57.507 29.630 0.00 0.00 0.00 3.86
652 1391 6.024552 TGAAAATTGGTTAGATGTTCCTGC 57.975 37.500 0.00 0.00 0.00 4.85
653 1392 5.047377 TGAAAATTGGTTAGATGTTCCTGCC 60.047 40.000 0.00 0.00 0.00 4.85
654 1393 4.322057 AATTGGTTAGATGTTCCTGCCT 57.678 40.909 0.00 0.00 0.00 4.75
655 1394 5.450818 AATTGGTTAGATGTTCCTGCCTA 57.549 39.130 0.00 0.00 0.00 3.93
656 1395 4.487714 TTGGTTAGATGTTCCTGCCTAG 57.512 45.455 0.00 0.00 0.00 3.02
657 1396 2.170607 TGGTTAGATGTTCCTGCCTAGC 59.829 50.000 0.00 0.00 0.00 3.42
658 1397 2.485657 GGTTAGATGTTCCTGCCTAGCC 60.486 54.545 0.00 0.00 0.00 3.93
659 1398 2.436173 GTTAGATGTTCCTGCCTAGCCT 59.564 50.000 0.00 0.00 0.00 4.58
660 1399 1.589414 AGATGTTCCTGCCTAGCCTT 58.411 50.000 0.00 0.00 0.00 4.35
661 1400 1.211457 AGATGTTCCTGCCTAGCCTTG 59.789 52.381 0.00 0.00 0.00 3.61
662 1401 0.257039 ATGTTCCTGCCTAGCCTTGG 59.743 55.000 0.00 0.00 0.00 3.61
663 1402 1.133809 TGTTCCTGCCTAGCCTTGGT 61.134 55.000 0.00 0.00 0.00 3.67
664 1403 0.038310 GTTCCTGCCTAGCCTTGGTT 59.962 55.000 0.00 0.00 0.00 3.67
665 1404 0.328258 TTCCTGCCTAGCCTTGGTTC 59.672 55.000 0.00 0.00 0.00 3.62
666 1405 1.077429 CCTGCCTAGCCTTGGTTCC 60.077 63.158 0.00 0.00 0.00 3.62
667 1406 1.077429 CTGCCTAGCCTTGGTTCCC 60.077 63.158 0.00 0.00 0.00 3.97
668 1407 2.275748 GCCTAGCCTTGGTTCCCC 59.724 66.667 0.00 0.00 0.00 4.81
669 1408 3.007542 CCTAGCCTTGGTTCCCCC 58.992 66.667 0.00 0.00 0.00 5.40
670 1409 1.928567 CCTAGCCTTGGTTCCCCCA 60.929 63.158 0.00 0.00 43.27 4.96
671 1410 1.289244 CCTAGCCTTGGTTCCCCCAT 61.289 60.000 0.00 0.00 44.74 4.00
672 1411 1.518367 CTAGCCTTGGTTCCCCCATA 58.482 55.000 0.00 0.00 44.74 2.74
673 1412 1.143073 CTAGCCTTGGTTCCCCCATAC 59.857 57.143 0.00 0.00 44.74 2.39
674 1413 0.849094 AGCCTTGGTTCCCCCATACA 60.849 55.000 0.00 0.00 44.74 2.29
675 1414 0.261696 GCCTTGGTTCCCCCATACAT 59.738 55.000 0.00 0.00 44.74 2.29
676 1415 1.497286 GCCTTGGTTCCCCCATACATA 59.503 52.381 0.00 0.00 44.74 2.29
677 1416 2.489073 GCCTTGGTTCCCCCATACATAG 60.489 54.545 0.00 0.00 44.74 2.23
678 1417 2.783510 CCTTGGTTCCCCCATACATAGT 59.216 50.000 0.00 0.00 44.74 2.12
679 1418 3.181443 CCTTGGTTCCCCCATACATAGTC 60.181 52.174 0.00 0.00 44.74 2.59
680 1419 2.414612 TGGTTCCCCCATACATAGTCC 58.585 52.381 0.00 0.00 38.72 3.85
681 1420 1.346722 GGTTCCCCCATACATAGTCCG 59.653 57.143 0.00 0.00 0.00 4.79
682 1421 1.346722 GTTCCCCCATACATAGTCCGG 59.653 57.143 0.00 0.00 0.00 5.14
683 1422 0.178915 TCCCCCATACATAGTCCGGG 60.179 60.000 0.00 0.00 36.59 5.73
684 1423 0.473117 CCCCCATACATAGTCCGGGT 60.473 60.000 0.00 0.00 34.89 5.28
685 1424 0.974383 CCCCATACATAGTCCGGGTC 59.026 60.000 0.00 0.00 34.89 4.46
686 1425 0.974383 CCCATACATAGTCCGGGTCC 59.026 60.000 0.00 0.00 31.80 4.46
703 1442 2.336088 CTGCCAAAACGCCACTGG 59.664 61.111 0.00 0.00 0.00 4.00
735 1474 7.552687 TGATGCCTACACCTTGTTTATTTAGAG 59.447 37.037 0.00 0.00 0.00 2.43
742 1481 8.828688 ACACCTTGTTTATTTAGAGTGTACTC 57.171 34.615 3.85 3.85 43.17 2.59
807 1566 4.600012 CGATACGGATGAATATTTGGCC 57.400 45.455 0.00 0.00 0.00 5.36
875 1635 1.219393 GACTCCTGTGTAGGGCAGC 59.781 63.158 0.00 0.00 44.70 5.25
915 1675 2.266373 CTACAAGTAGCACGCGTCG 58.734 57.895 9.86 6.55 0.00 5.12
941 1701 3.444717 TAGCTAACGACGAGCGCCG 62.445 63.158 15.25 15.25 44.98 6.46
967 1731 3.963428 AGTAAACCAGAGTACTGCCAG 57.037 47.619 0.00 0.00 42.25 4.85
1413 2185 1.817099 GCTCTGCTCCCATCGGTTG 60.817 63.158 0.00 0.00 0.00 3.77
1415 2187 0.250234 CTCTGCTCCCATCGGTTGAA 59.750 55.000 0.00 0.00 0.00 2.69
1417 2189 1.361668 CTGCTCCCATCGGTTGAACG 61.362 60.000 0.00 0.00 0.00 3.95
1418 2190 2.106683 GCTCCCATCGGTTGAACGG 61.107 63.158 0.00 0.00 0.00 4.44
1419 2191 2.046700 TCCCATCGGTTGAACGGC 60.047 61.111 0.00 0.00 0.00 5.68
1420 2192 2.046314 CCCATCGGTTGAACGGCT 60.046 61.111 0.00 0.00 0.00 5.52
1421 2193 2.106683 CCCATCGGTTGAACGGCTC 61.107 63.158 0.00 0.00 0.00 4.70
1422 2194 2.106683 CCATCGGTTGAACGGCTCC 61.107 63.158 0.00 0.00 0.00 4.70
1423 2195 1.375396 CATCGGTTGAACGGCTCCA 60.375 57.895 0.00 0.00 0.00 3.86
1424 2196 1.375523 ATCGGTTGAACGGCTCCAC 60.376 57.895 0.00 0.00 0.00 4.02
1425 2197 2.798148 ATCGGTTGAACGGCTCCACC 62.798 60.000 0.00 1.20 36.65 4.61
1446 2225 0.675837 TCCGTCTCGATGGTTCGTCT 60.676 55.000 5.16 0.00 45.65 4.18
1449 2228 2.349627 CCGTCTCGATGGTTCGTCTATC 60.350 54.545 0.00 0.00 45.65 2.08
1529 2334 1.937899 GCGTTGTACACCTCTTGTTGT 59.062 47.619 0.00 0.00 39.91 3.32
1532 2337 4.212636 GCGTTGTACACCTCTTGTTGTATT 59.787 41.667 0.00 0.00 39.91 1.89
1537 2342 7.733402 TGTACACCTCTTGTTGTATTTTACC 57.267 36.000 0.00 0.00 39.91 2.85
1539 2344 7.658575 TGTACACCTCTTGTTGTATTTTACCTC 59.341 37.037 0.00 0.00 39.91 3.85
1542 2347 7.390718 ACACCTCTTGTTGTATTTTACCTCATC 59.609 37.037 0.00 0.00 33.09 2.92
1543 2348 6.884836 ACCTCTTGTTGTATTTTACCTCATCC 59.115 38.462 0.00 0.00 0.00 3.51
1558 2363 1.550524 TCATCCCTTGTTGGACTCTCG 59.449 52.381 0.00 0.00 37.20 4.04
1560 2365 0.832135 TCCCTTGTTGGACTCTCGCT 60.832 55.000 0.00 0.00 38.35 4.93
1573 2378 5.050490 GGACTCTCGCTGCATATTTTTCTA 58.950 41.667 0.00 0.00 0.00 2.10
1576 2381 5.751028 ACTCTCGCTGCATATTTTTCTACTC 59.249 40.000 0.00 0.00 0.00 2.59
1601 2406 2.125512 GCGGAATCTGTCAGCCGT 60.126 61.111 15.88 0.00 45.22 5.68
1602 2407 1.141019 GCGGAATCTGTCAGCCGTA 59.859 57.895 15.88 0.00 45.22 4.02
1604 2409 1.278238 CGGAATCTGTCAGCCGTAAC 58.722 55.000 8.71 0.00 38.99 2.50
1605 2410 1.278238 GGAATCTGTCAGCCGTAACG 58.722 55.000 0.00 0.00 0.00 3.18
1607 2412 2.159338 GGAATCTGTCAGCCGTAACGTA 60.159 50.000 0.00 0.00 0.00 3.57
1625 2430 8.335356 CGTAACGTAGTAGTATAAGCAGGTAAA 58.665 37.037 0.00 0.00 45.00 2.01
1644 2703 7.814107 CAGGTAAAATGTTGCATTTACTGTCAT 59.186 33.333 16.30 1.40 40.30 3.06
1656 2715 2.645838 ACTGTCATCCAGCAGTGTTT 57.354 45.000 0.00 0.00 45.68 2.83
1658 2717 1.808945 CTGTCATCCAGCAGTGTTTCC 59.191 52.381 0.00 0.00 33.59 3.13
1691 2751 3.980646 AGCAAGTTGTGTTCGCAATTA 57.019 38.095 4.48 0.00 0.00 1.40
1710 2770 7.052565 CAATTACTGCACAATCAAATCAACC 57.947 36.000 0.00 0.00 0.00 3.77
1739 2799 4.537751 AGTCTGCTCAGTGGCTTATACTA 58.462 43.478 5.39 0.00 0.00 1.82
1745 2805 4.681942 GCTCAGTGGCTTATACTATGAACG 59.318 45.833 0.00 0.00 0.00 3.95
1751 2811 5.238650 GTGGCTTATACTATGAACGCCATTT 59.761 40.000 3.23 0.00 46.33 2.32
1786 2846 3.430779 GGAAAGTTCCGTCGGTAGG 57.569 57.895 11.88 0.00 37.65 3.18
1792 2852 0.600057 GTTCCGTCGGTAGGTGACTT 59.400 55.000 11.88 0.00 43.67 3.01
1793 2853 0.599558 TTCCGTCGGTAGGTGACTTG 59.400 55.000 11.88 0.00 43.67 3.16
1795 2855 1.445582 CGTCGGTAGGTGACTTGGC 60.446 63.158 0.00 0.00 43.67 4.52
1815 3501 2.095567 GCAGTGGCTGACATGTTAGTTG 60.096 50.000 17.93 12.32 36.96 3.16
1828 3514 4.040936 TGTTAGTTGGCCCACATGTTAT 57.959 40.909 10.02 0.00 0.00 1.89
1833 3529 2.560542 GTTGGCCCACATGTTATTCACA 59.439 45.455 0.00 0.00 40.71 3.58
1858 3616 9.994432 CATAAGTTAAGTTAGAGGAAATTGCTG 57.006 33.333 8.64 0.00 0.00 4.41
1861 3619 6.881602 AGTTAAGTTAGAGGAAATTGCTGGAG 59.118 38.462 0.00 0.00 0.00 3.86
1862 3620 4.917906 AGTTAGAGGAAATTGCTGGAGT 57.082 40.909 0.00 0.00 0.00 3.85
1863 3621 6.374417 AAGTTAGAGGAAATTGCTGGAGTA 57.626 37.500 0.00 0.00 0.00 2.59
1864 3622 6.374417 AGTTAGAGGAAATTGCTGGAGTAA 57.626 37.500 0.00 0.00 0.00 2.24
1865 3623 6.410540 AGTTAGAGGAAATTGCTGGAGTAAG 58.589 40.000 0.00 0.00 0.00 2.34
1966 3790 8.888332 TGTAGTTGTTCATTATATTGTTTGCG 57.112 30.769 0.00 0.00 0.00 4.85
2027 3851 0.252789 TTATGGGTCGGAAGGGGACA 60.253 55.000 0.00 0.00 36.12 4.02
2132 3956 1.936547 CTTCTCACAGGATTTAGCGCC 59.063 52.381 2.29 0.00 0.00 6.53
2329 4153 2.430921 CCTTGTCTTCGCGCTCGT 60.431 61.111 5.56 0.00 36.96 4.18
2430 4254 2.034124 ACATTGCATCCACTAATGGCC 58.966 47.619 0.00 0.00 46.80 5.36
2453 4277 0.749454 GCATCCCAGATGGTGTCACC 60.749 60.000 15.64 15.64 39.22 4.02
2492 4316 4.713792 AGATGACCTCAACAAGAAGGTT 57.286 40.909 0.00 0.00 34.38 3.50
2811 4635 2.161609 GGTGCCTTGAGGTAATTGAACG 59.838 50.000 0.00 0.00 37.57 3.95
2850 4681 0.884704 CACGACAGGGTGAGGTTTGG 60.885 60.000 0.00 0.00 40.38 3.28
3258 5100 8.773404 ACTAGCTTTTGTAATTATCGTGACTT 57.227 30.769 0.00 0.00 0.00 3.01
3276 5118 3.606687 ACTTAAAGATGTTAGCACGGGG 58.393 45.455 0.00 0.00 0.00 5.73
3328 5173 4.923281 GCTTGAACGAATTGTTATTTGGCT 59.077 37.500 0.00 0.00 42.09 4.75
3341 5186 6.155827 TGTTATTTGGCTTTGTGCTAATGTC 58.844 36.000 0.00 0.00 41.70 3.06
3349 5202 5.007136 GGCTTTGTGCTAATGTCTAGCTTAG 59.993 44.000 0.00 0.00 40.95 2.18
3369 5222 9.131791 AGCTTAGTTTTTAGGAATTCAGTTGAA 57.868 29.630 7.93 0.00 38.56 2.69
3432 5286 3.967332 ATGCCATTCTTTTGGGTCTTG 57.033 42.857 0.00 0.00 37.24 3.02
3443 5297 8.528044 TTCTTTTGGGTCTTGTTTTATAGTGT 57.472 30.769 0.00 0.00 0.00 3.55
3504 5359 5.897377 AAAATACTCCCTCCGTCAATTTG 57.103 39.130 0.00 0.00 0.00 2.32
3506 5361 1.064825 ACTCCCTCCGTCAATTTGGT 58.935 50.000 0.00 0.00 0.00 3.67
3507 5362 1.423921 ACTCCCTCCGTCAATTTGGTT 59.576 47.619 0.00 0.00 0.00 3.67
3510 5365 1.960689 CCCTCCGTCAATTTGGTTGTT 59.039 47.619 0.00 0.00 38.95 2.83
3513 5368 3.818773 CCTCCGTCAATTTGGTTGTTACT 59.181 43.478 0.00 0.00 38.95 2.24
3514 5369 4.083484 CCTCCGTCAATTTGGTTGTTACTC 60.083 45.833 0.00 0.00 38.95 2.59
3516 5371 5.067273 TCCGTCAATTTGGTTGTTACTCAT 58.933 37.500 0.00 0.00 38.95 2.90
3517 5372 5.049060 TCCGTCAATTTGGTTGTTACTCATG 60.049 40.000 0.00 0.00 38.95 3.07
3519 5374 5.851177 CGTCAATTTGGTTGTTACTCATGAC 59.149 40.000 0.00 0.00 38.95 3.06
3521 5376 6.857964 GTCAATTTGGTTGTTACTCATGACTG 59.142 38.462 0.00 0.00 38.95 3.51
3522 5377 6.545666 TCAATTTGGTTGTTACTCATGACTGT 59.454 34.615 0.00 0.00 38.95 3.55
3523 5378 6.560253 ATTTGGTTGTTACTCATGACTGTC 57.440 37.500 0.00 0.00 0.00 3.51
3524 5379 3.649073 TGGTTGTTACTCATGACTGTCG 58.351 45.455 2.98 0.00 0.00 4.35
3525 5380 3.319689 TGGTTGTTACTCATGACTGTCGA 59.680 43.478 2.98 0.00 0.00 4.20
3527 5382 4.748102 GGTTGTTACTCATGACTGTCGAAA 59.252 41.667 2.98 0.00 0.00 3.46
3528 5383 5.107453 GGTTGTTACTCATGACTGTCGAAAG 60.107 44.000 0.00 0.00 0.00 2.62
3529 5384 5.196341 TGTTACTCATGACTGTCGAAAGT 57.804 39.130 8.32 8.32 0.00 2.66
3530 5385 5.597806 TGTTACTCATGACTGTCGAAAGTT 58.402 37.500 10.22 0.00 0.00 2.66
3532 5387 7.375834 TGTTACTCATGACTGTCGAAAGTTAT 58.624 34.615 10.22 8.57 0.00 1.89
3534 5389 6.712241 ACTCATGACTGTCGAAAGTTATTG 57.288 37.500 10.22 8.85 0.00 1.90
3536 5391 6.366332 ACTCATGACTGTCGAAAGTTATTGAC 59.634 38.462 10.22 0.00 34.79 3.18
3538 5393 6.366061 TCATGACTGTCGAAAGTTATTGACTG 59.634 38.462 10.22 0.77 39.00 3.51
3539 5394 4.447724 TGACTGTCGAAAGTTATTGACTGC 59.552 41.667 10.22 0.00 39.00 4.40
3540 5395 3.428870 ACTGTCGAAAGTTATTGACTGCG 59.571 43.478 1.19 0.00 39.00 5.18
3543 5398 4.084745 TGTCGAAAGTTATTGACTGCGTTC 60.085 41.667 0.00 0.00 39.00 3.95
3544 5399 3.120616 TCGAAAGTTATTGACTGCGTTCG 59.879 43.478 7.29 7.29 42.91 3.95
3545 5400 3.720920 CGAAAGTTATTGACTGCGTTCGG 60.721 47.826 6.18 0.00 40.15 4.30
3565 5420 1.238439 CAGGGCGACTGTTGTTCATT 58.762 50.000 0.00 0.00 42.42 2.57
3566 5421 1.069022 CAGGGCGACTGTTGTTCATTG 60.069 52.381 0.00 0.00 42.42 2.82
3568 5423 1.334960 GGGCGACTGTTGTTCATTGTG 60.335 52.381 0.00 0.00 0.00 3.33
3569 5424 1.398595 GCGACTGTTGTTCATTGTGC 58.601 50.000 0.00 0.00 0.00 4.57
3571 5426 2.908634 CGACTGTTGTTCATTGTGCTC 58.091 47.619 0.00 0.00 0.00 4.26
3574 5429 0.950836 TGTTGTTCATTGTGCTCGGG 59.049 50.000 0.00 0.00 0.00 5.14
3575 5430 1.234821 GTTGTTCATTGTGCTCGGGA 58.765 50.000 0.00 0.00 0.00 5.14
3576 5431 1.606668 GTTGTTCATTGTGCTCGGGAA 59.393 47.619 0.00 0.00 0.00 3.97
3577 5432 1.522668 TGTTCATTGTGCTCGGGAAG 58.477 50.000 0.00 0.00 0.00 3.46
3578 5433 0.804989 GTTCATTGTGCTCGGGAAGG 59.195 55.000 0.00 0.00 0.00 3.46
3580 5435 1.271856 TCATTGTGCTCGGGAAGGTA 58.728 50.000 0.00 0.00 0.00 3.08
3581 5436 1.626321 TCATTGTGCTCGGGAAGGTAA 59.374 47.619 0.00 0.00 0.00 2.85
3582 5437 2.238646 TCATTGTGCTCGGGAAGGTAAT 59.761 45.455 0.00 0.00 0.00 1.89
3583 5438 2.107950 TTGTGCTCGGGAAGGTAATG 57.892 50.000 0.00 0.00 0.00 1.90
3584 5439 0.981183 TGTGCTCGGGAAGGTAATGT 59.019 50.000 0.00 0.00 0.00 2.71
3585 5440 1.338674 TGTGCTCGGGAAGGTAATGTG 60.339 52.381 0.00 0.00 0.00 3.21
3586 5441 0.251916 TGCTCGGGAAGGTAATGTGG 59.748 55.000 0.00 0.00 0.00 4.17
3589 5444 2.483188 GCTCGGGAAGGTAATGTGGTAG 60.483 54.545 0.00 0.00 0.00 3.18
3590 5445 1.483415 TCGGGAAGGTAATGTGGTAGC 59.517 52.381 0.00 0.00 0.00 3.58
3591 5446 1.805120 CGGGAAGGTAATGTGGTAGCG 60.805 57.143 0.00 0.00 0.00 4.26
3596 5451 0.944386 GGTAATGTGGTAGCGCATGG 59.056 55.000 20.79 0.00 0.00 3.66
3597 5452 0.944386 GTAATGTGGTAGCGCATGGG 59.056 55.000 20.79 5.19 0.00 4.00
3598 5453 0.817634 TAATGTGGTAGCGCATGGGC 60.818 55.000 26.04 26.04 0.00 5.36
3599 5454 2.556840 AATGTGGTAGCGCATGGGCT 62.557 55.000 35.54 35.54 46.88 5.19
3600 5455 2.438434 GTGGTAGCGCATGGGCTT 60.438 61.111 37.82 23.12 41.39 4.35
3601 5456 2.438254 TGGTAGCGCATGGGCTTG 60.438 61.111 37.82 0.00 41.39 4.01
3602 5457 3.892581 GGTAGCGCATGGGCTTGC 61.893 66.667 37.82 28.87 41.39 4.01
3603 5458 2.825836 GTAGCGCATGGGCTTGCT 60.826 61.111 37.82 19.45 41.39 3.91
3604 5459 2.514592 TAGCGCATGGGCTTGCTC 60.515 61.111 37.82 8.57 41.39 4.26
3609 5464 4.809496 CATGGGCTTGCTCGGGCT 62.809 66.667 9.62 0.00 39.59 5.19
3610 5465 3.089874 ATGGGCTTGCTCGGGCTA 61.090 61.111 9.62 0.00 39.59 3.93
3612 5467 3.787001 GGGCTTGCTCGGGCTAGT 61.787 66.667 19.82 0.00 41.90 2.57
3614 5469 1.520666 GGCTTGCTCGGGCTAGTTA 59.479 57.895 19.82 0.00 41.90 2.24
3616 5471 0.108329 GCTTGCTCGGGCTAGTTACA 60.108 55.000 19.82 0.00 41.90 2.41
3617 5472 1.927895 CTTGCTCGGGCTAGTTACAG 58.072 55.000 9.62 0.00 36.75 2.74
3618 5473 1.476891 CTTGCTCGGGCTAGTTACAGA 59.523 52.381 9.62 0.00 36.75 3.41
3619 5474 1.103803 TGCTCGGGCTAGTTACAGAG 58.896 55.000 9.62 0.00 39.59 3.35
3620 5475 0.386113 GCTCGGGCTAGTTACAGAGG 59.614 60.000 0.00 0.00 35.22 3.69
3631 5939 7.362142 GGGCTAGTTACAGAGGAAATTTTTCTG 60.362 40.741 22.23 22.23 43.04 3.02
3632 5940 7.362142 GGCTAGTTACAGAGGAAATTTTTCTGG 60.362 40.741 25.13 14.28 41.98 3.86
3633 5941 7.390718 GCTAGTTACAGAGGAAATTTTTCTGGA 59.609 37.037 25.13 19.35 41.98 3.86
3634 5942 7.751768 AGTTACAGAGGAAATTTTTCTGGAG 57.248 36.000 25.13 10.77 41.98 3.86
3635 5943 7.518188 AGTTACAGAGGAAATTTTTCTGGAGA 58.482 34.615 25.13 14.36 41.98 3.71
3636 5944 7.663493 AGTTACAGAGGAAATTTTTCTGGAGAG 59.337 37.037 25.13 10.29 41.98 3.20
3637 5945 5.946486 ACAGAGGAAATTTTTCTGGAGAGT 58.054 37.500 25.13 10.76 41.98 3.24
3638 5946 5.767168 ACAGAGGAAATTTTTCTGGAGAGTG 59.233 40.000 25.13 9.91 41.98 3.51
3639 5947 5.182760 CAGAGGAAATTTTTCTGGAGAGTGG 59.817 44.000 18.71 0.28 37.35 4.00
3640 5948 3.829026 AGGAAATTTTTCTGGAGAGTGGC 59.171 43.478 3.28 0.00 37.35 5.01
3641 5949 3.366374 GGAAATTTTTCTGGAGAGTGGCG 60.366 47.826 3.28 0.00 37.35 5.69
3642 5950 2.859165 ATTTTTCTGGAGAGTGGCGA 57.141 45.000 0.00 0.00 0.00 5.54
3643 5951 2.169832 TTTTTCTGGAGAGTGGCGAG 57.830 50.000 0.00 0.00 0.00 5.03
3644 5952 1.338107 TTTTCTGGAGAGTGGCGAGA 58.662 50.000 0.00 0.00 0.00 4.04
3645 5953 1.561643 TTTCTGGAGAGTGGCGAGAT 58.438 50.000 0.00 0.00 0.00 2.75
3646 5954 2.437085 TTCTGGAGAGTGGCGAGATA 57.563 50.000 0.00 0.00 0.00 1.98
3647 5955 2.437085 TCTGGAGAGTGGCGAGATAA 57.563 50.000 0.00 0.00 0.00 1.75
3648 5956 2.735151 TCTGGAGAGTGGCGAGATAAA 58.265 47.619 0.00 0.00 0.00 1.40
3649 5957 2.427453 TCTGGAGAGTGGCGAGATAAAC 59.573 50.000 0.00 0.00 0.00 2.01
3650 5958 1.480954 TGGAGAGTGGCGAGATAAACC 59.519 52.381 0.00 0.00 0.00 3.27
3651 5959 1.757699 GGAGAGTGGCGAGATAAACCT 59.242 52.381 0.00 0.00 0.00 3.50
3652 5960 2.223852 GGAGAGTGGCGAGATAAACCTC 60.224 54.545 0.00 0.00 0.00 3.85
3653 5961 1.757699 AGAGTGGCGAGATAAACCTCC 59.242 52.381 0.00 0.00 0.00 4.30
3654 5962 1.757699 GAGTGGCGAGATAAACCTCCT 59.242 52.381 0.00 0.00 0.00 3.69
3655 5963 1.482593 AGTGGCGAGATAAACCTCCTG 59.517 52.381 0.00 0.00 0.00 3.86
3656 5964 1.480954 GTGGCGAGATAAACCTCCTGA 59.519 52.381 0.00 0.00 0.00 3.86
3657 5965 2.103263 GTGGCGAGATAAACCTCCTGAT 59.897 50.000 0.00 0.00 0.00 2.90
3658 5966 2.771943 TGGCGAGATAAACCTCCTGATT 59.228 45.455 0.00 0.00 0.00 2.57
3659 5967 3.199946 TGGCGAGATAAACCTCCTGATTT 59.800 43.478 0.00 0.00 0.00 2.17
3660 5968 3.810386 GGCGAGATAAACCTCCTGATTTC 59.190 47.826 0.00 0.00 0.00 2.17
3661 5969 4.443598 GGCGAGATAAACCTCCTGATTTCT 60.444 45.833 0.00 0.00 0.00 2.52
3662 5970 5.119694 GCGAGATAAACCTCCTGATTTCTT 58.880 41.667 0.00 0.00 0.00 2.52
3663 5971 6.281405 GCGAGATAAACCTCCTGATTTCTTA 58.719 40.000 0.00 0.00 0.00 2.10
3664 5972 6.201234 GCGAGATAAACCTCCTGATTTCTTAC 59.799 42.308 0.00 0.00 0.00 2.34
3665 5973 7.493367 CGAGATAAACCTCCTGATTTCTTACT 58.507 38.462 0.00 0.00 0.00 2.24
3666 5974 7.650104 CGAGATAAACCTCCTGATTTCTTACTC 59.350 40.741 0.00 0.00 0.00 2.59
3667 5975 7.797062 AGATAAACCTCCTGATTTCTTACTCC 58.203 38.462 0.00 0.00 0.00 3.85
3668 5976 4.846168 AACCTCCTGATTTCTTACTCCC 57.154 45.455 0.00 0.00 0.00 4.30
3669 5977 3.116174 ACCTCCTGATTTCTTACTCCCC 58.884 50.000 0.00 0.00 0.00 4.81
3670 5978 3.246535 ACCTCCTGATTTCTTACTCCCCT 60.247 47.826 0.00 0.00 0.00 4.79
3671 5979 3.783082 CCTCCTGATTTCTTACTCCCCTT 59.217 47.826 0.00 0.00 0.00 3.95
3672 5980 4.141597 CCTCCTGATTTCTTACTCCCCTTC 60.142 50.000 0.00 0.00 0.00 3.46
3673 5981 3.780850 TCCTGATTTCTTACTCCCCTTCC 59.219 47.826 0.00 0.00 0.00 3.46
3674 5982 3.783082 CCTGATTTCTTACTCCCCTTCCT 59.217 47.826 0.00 0.00 0.00 3.36
3675 5983 4.228438 CCTGATTTCTTACTCCCCTTCCTT 59.772 45.833 0.00 0.00 0.00 3.36
3676 5984 5.179452 TGATTTCTTACTCCCCTTCCTTG 57.821 43.478 0.00 0.00 0.00 3.61
3677 5985 4.601857 TGATTTCTTACTCCCCTTCCTTGT 59.398 41.667 0.00 0.00 0.00 3.16
3678 5986 5.788533 TGATTTCTTACTCCCCTTCCTTGTA 59.211 40.000 0.00 0.00 0.00 2.41
3679 5987 6.273730 TGATTTCTTACTCCCCTTCCTTGTAA 59.726 38.462 0.00 0.00 0.00 2.41
3680 5988 5.494390 TTCTTACTCCCCTTCCTTGTAAC 57.506 43.478 0.00 0.00 0.00 2.50
3681 5989 4.759953 TCTTACTCCCCTTCCTTGTAACT 58.240 43.478 0.00 0.00 0.00 2.24
3682 5990 4.530946 TCTTACTCCCCTTCCTTGTAACTG 59.469 45.833 0.00 0.00 0.00 3.16
3683 5991 2.986050 ACTCCCCTTCCTTGTAACTGA 58.014 47.619 0.00 0.00 0.00 3.41
3684 5992 3.532102 ACTCCCCTTCCTTGTAACTGAT 58.468 45.455 0.00 0.00 0.00 2.90
3685 5993 4.695606 ACTCCCCTTCCTTGTAACTGATA 58.304 43.478 0.00 0.00 0.00 2.15
3686 5994 5.289510 ACTCCCCTTCCTTGTAACTGATAT 58.710 41.667 0.00 0.00 0.00 1.63
3687 5995 5.131142 ACTCCCCTTCCTTGTAACTGATATG 59.869 44.000 0.00 0.00 0.00 1.78
3688 5996 5.285401 TCCCCTTCCTTGTAACTGATATGA 58.715 41.667 0.00 0.00 0.00 2.15
3689 5997 5.911178 TCCCCTTCCTTGTAACTGATATGAT 59.089 40.000 0.00 0.00 0.00 2.45
3690 5998 6.389869 TCCCCTTCCTTGTAACTGATATGATT 59.610 38.462 0.00 0.00 0.00 2.57
3691 5999 7.570982 TCCCCTTCCTTGTAACTGATATGATTA 59.429 37.037 0.00 0.00 0.00 1.75
3692 6000 8.386264 CCCCTTCCTTGTAACTGATATGATTAT 58.614 37.037 0.00 0.00 0.00 1.28
3693 6001 9.799106 CCCTTCCTTGTAACTGATATGATTATT 57.201 33.333 0.00 0.00 0.00 1.40
3711 6019 8.918961 TGATTATTGTTTAATAAAGGTTGCCG 57.081 30.769 0.00 0.00 40.91 5.69
3712 6020 8.740906 TGATTATTGTTTAATAAAGGTTGCCGA 58.259 29.630 0.00 0.00 40.91 5.54
3713 6021 9.575783 GATTATTGTTTAATAAAGGTTGCCGAA 57.424 29.630 0.00 0.00 40.91 4.30
3715 6023 9.575783 TTATTGTTTAATAAAGGTTGCCGAATC 57.424 29.630 0.00 0.00 36.18 2.52
3716 6024 6.827586 TGTTTAATAAAGGTTGCCGAATCT 57.172 33.333 0.00 0.00 0.00 2.40
3717 6025 7.925043 TGTTTAATAAAGGTTGCCGAATCTA 57.075 32.000 0.00 0.00 0.00 1.98
3718 6026 8.338072 TGTTTAATAAAGGTTGCCGAATCTAA 57.662 30.769 0.00 0.00 0.00 2.10
3719 6027 8.794553 TGTTTAATAAAGGTTGCCGAATCTAAA 58.205 29.630 0.00 0.00 0.00 1.85
3777 6085 3.503365 TCGTTTAGGGTTTCTCTCCTCA 58.497 45.455 0.00 0.00 34.75 3.86
3784 6092 1.913262 TTTCTCTCCTCAGGCGGCA 60.913 57.895 13.08 0.00 0.00 5.69
3795 6103 3.499737 GGCGGCAACTCCATCACG 61.500 66.667 3.07 0.00 42.67 4.35
3814 6122 2.047655 CTGCGAGTTTACCGGCCA 60.048 61.111 0.00 0.00 0.00 5.36
3816 6124 3.484547 GCGAGTTTACCGGCCACG 61.485 66.667 0.00 0.06 40.55 4.94
3873 6181 2.524394 GCCGGGCTATGGAGAGGA 60.524 66.667 12.87 0.00 0.00 3.71
3874 6182 2.578714 GCCGGGCTATGGAGAGGAG 61.579 68.421 12.87 0.00 0.00 3.69
4021 7551 4.570719 GGGGAGGAGGAAATGAAGAAATGT 60.571 45.833 0.00 0.00 0.00 2.71
4065 7595 2.100584 TGATTGGCAGGTTGAACACAAC 59.899 45.455 0.00 0.00 41.91 3.32
4074 7604 2.285977 GTTGAACACAACTCGTCCCTT 58.714 47.619 0.00 0.00 40.20 3.95
4075 7605 2.681344 GTTGAACACAACTCGTCCCTTT 59.319 45.455 0.00 0.00 40.20 3.11
4076 7606 3.823281 TGAACACAACTCGTCCCTTTA 57.177 42.857 0.00 0.00 0.00 1.85
4077 7607 4.139859 TGAACACAACTCGTCCCTTTAA 57.860 40.909 0.00 0.00 0.00 1.52
4160 7690 4.873010 AGTATAGAGAGGCAGGAGACAAA 58.127 43.478 0.00 0.00 0.00 2.83
4194 7903 4.761739 TCCAGATGTTTTGTCTCAATGACC 59.238 41.667 0.00 0.00 44.75 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 6.209986 AGGGCTATGTTAACCTAAAACAAACC 59.790 38.462 2.48 0.00 40.05 3.27
50 51 4.055360 GGCCATTAACTTGGTTGTTTGTC 58.945 43.478 0.00 0.00 39.11 3.18
93 94 4.039124 AGCCTTCCAACCAAATTACAACAG 59.961 41.667 0.00 0.00 0.00 3.16
148 872 0.108329 ATACGTTTGGAGACCGGCAG 60.108 55.000 0.00 0.00 0.00 4.85
170 894 2.444256 AACGCATAGGGAGCCCTCC 61.444 63.158 12.24 0.00 44.43 4.30
180 904 3.679502 TCATCAGTTGTCACAACGCATAG 59.320 43.478 15.05 6.01 0.00 2.23
188 912 2.028567 TGCCGTATCATCAGTTGTCACA 60.029 45.455 0.00 0.00 0.00 3.58
253 977 6.966534 AATATGTAAAGAATGGAAGCTGGG 57.033 37.500 0.00 0.00 0.00 4.45
255 979 9.125026 ACCTTAATATGTAAAGAATGGAAGCTG 57.875 33.333 0.00 0.00 0.00 4.24
305 1042 0.327867 ATGGAGGGGATTGCAGAGGA 60.328 55.000 0.00 0.00 0.00 3.71
309 1046 1.213678 TCTTGATGGAGGGGATTGCAG 59.786 52.381 0.00 0.00 0.00 4.41
378 1115 1.386533 ATCGCCAAGCTGAAAGATGG 58.613 50.000 0.00 0.00 43.09 3.51
452 1191 1.890979 CATGGCAGCCGTCAGATCC 60.891 63.158 1.92 0.00 0.00 3.36
454 1193 2.191375 CCATGGCAGCCGTCAGAT 59.809 61.111 1.92 0.00 0.00 2.90
455 1194 4.783621 GCCATGGCAGCCGTCAGA 62.784 66.667 32.08 0.00 41.49 3.27
467 1206 4.424566 GTGCCGGTTGCTGCCATG 62.425 66.667 1.90 0.00 42.00 3.66
492 1231 3.121030 ATCTGCTGCAACGCGGTC 61.121 61.111 12.47 0.00 37.24 4.79
493 1232 3.425713 CATCTGCTGCAACGCGGT 61.426 61.111 12.47 0.00 37.24 5.68
494 1233 4.170062 CCATCTGCTGCAACGCGG 62.170 66.667 12.47 0.34 38.08 6.46
495 1234 4.824166 GCCATCTGCTGCAACGCG 62.824 66.667 3.53 3.53 36.87 6.01
496 1235 4.487412 GGCCATCTGCTGCAACGC 62.487 66.667 3.02 2.64 40.92 4.84
497 1236 4.170062 CGGCCATCTGCTGCAACG 62.170 66.667 2.24 0.00 40.07 4.10
498 1237 2.056481 GATCGGCCATCTGCTGCAAC 62.056 60.000 2.24 0.00 46.56 4.17
499 1238 1.820906 GATCGGCCATCTGCTGCAA 60.821 57.895 2.24 0.00 46.56 4.08
500 1239 2.203112 GATCGGCCATCTGCTGCA 60.203 61.111 2.24 0.88 46.56 4.41
501 1240 2.110627 AGATCGGCCATCTGCTGC 59.889 61.111 14.56 0.00 46.56 5.25
506 1245 0.975135 CTCATCCAGATCGGCCATCT 59.025 55.000 2.24 7.73 43.33 2.90
507 1246 0.036577 CCTCATCCAGATCGGCCATC 60.037 60.000 2.24 5.26 33.14 3.51
508 1247 1.486997 CCCTCATCCAGATCGGCCAT 61.487 60.000 2.24 0.00 33.14 4.40
509 1248 2.142761 CCCTCATCCAGATCGGCCA 61.143 63.158 2.24 0.00 33.14 5.36
510 1249 1.825281 CTCCCTCATCCAGATCGGCC 61.825 65.000 0.00 0.00 33.14 6.13
511 1250 0.829602 TCTCCCTCATCCAGATCGGC 60.830 60.000 0.00 0.00 33.14 5.54
512 1251 1.617850 CTTCTCCCTCATCCAGATCGG 59.382 57.143 0.00 0.00 0.00 4.18
513 1252 2.315176 ACTTCTCCCTCATCCAGATCG 58.685 52.381 0.00 0.00 0.00 3.69
514 1253 5.365314 AGTTAACTTCTCCCTCATCCAGATC 59.635 44.000 1.12 0.00 0.00 2.75
515 1254 5.130145 CAGTTAACTTCTCCCTCATCCAGAT 59.870 44.000 5.07 0.00 0.00 2.90
516 1255 4.467795 CAGTTAACTTCTCCCTCATCCAGA 59.532 45.833 5.07 0.00 0.00 3.86
517 1256 4.764172 CAGTTAACTTCTCCCTCATCCAG 58.236 47.826 5.07 0.00 0.00 3.86
518 1257 3.055094 GCAGTTAACTTCTCCCTCATCCA 60.055 47.826 5.07 0.00 0.00 3.41
519 1258 3.198853 AGCAGTTAACTTCTCCCTCATCC 59.801 47.826 5.07 0.00 0.00 3.51
520 1259 4.479786 AGCAGTTAACTTCTCCCTCATC 57.520 45.455 5.07 0.00 0.00 2.92
521 1260 4.837972 GAAGCAGTTAACTTCTCCCTCAT 58.162 43.478 8.27 0.00 40.33 2.90
522 1261 4.273148 GAAGCAGTTAACTTCTCCCTCA 57.727 45.455 8.27 0.00 40.33 3.86
529 1268 7.030768 ACTAGATCGAAGAAGCAGTTAACTTC 58.969 38.462 5.07 0.24 43.58 3.01
530 1269 6.926313 ACTAGATCGAAGAAGCAGTTAACTT 58.074 36.000 5.07 0.00 43.58 2.66
531 1270 6.518208 ACTAGATCGAAGAAGCAGTTAACT 57.482 37.500 1.12 1.12 43.58 2.24
532 1271 8.859517 AATACTAGATCGAAGAAGCAGTTAAC 57.140 34.615 0.00 0.00 43.58 2.01
533 1272 9.947669 GTAATACTAGATCGAAGAAGCAGTTAA 57.052 33.333 0.00 0.00 43.58 2.01
534 1273 9.339850 AGTAATACTAGATCGAAGAAGCAGTTA 57.660 33.333 0.00 0.00 43.58 2.24
535 1274 8.228035 AGTAATACTAGATCGAAGAAGCAGTT 57.772 34.615 0.00 0.00 43.58 3.16
536 1275 7.811117 AGTAATACTAGATCGAAGAAGCAGT 57.189 36.000 0.00 0.00 43.58 4.40
556 1295 9.256477 CGTGAATGAAGCATTTATACCTAGTAA 57.744 33.333 0.00 0.00 33.90 2.24
557 1296 8.635328 TCGTGAATGAAGCATTTATACCTAGTA 58.365 33.333 0.00 0.00 33.90 1.82
558 1297 7.497595 TCGTGAATGAAGCATTTATACCTAGT 58.502 34.615 0.00 0.00 33.90 2.57
559 1298 7.946655 TCGTGAATGAAGCATTTATACCTAG 57.053 36.000 0.00 0.00 33.90 3.02
560 1299 7.766738 TGTTCGTGAATGAAGCATTTATACCTA 59.233 33.333 0.00 0.00 33.90 3.08
561 1300 6.597672 TGTTCGTGAATGAAGCATTTATACCT 59.402 34.615 0.00 0.00 33.90 3.08
562 1301 6.781138 TGTTCGTGAATGAAGCATTTATACC 58.219 36.000 0.00 0.00 33.90 2.73
563 1302 8.736742 CATTGTTCGTGAATGAAGCATTTATAC 58.263 33.333 0.00 0.00 33.90 1.47
564 1303 7.914871 CCATTGTTCGTGAATGAAGCATTTATA 59.085 33.333 0.00 0.00 33.90 0.98
565 1304 6.753279 CCATTGTTCGTGAATGAAGCATTTAT 59.247 34.615 0.00 0.00 33.90 1.40
566 1305 6.092092 CCATTGTTCGTGAATGAAGCATTTA 58.908 36.000 0.00 0.00 33.90 1.40
567 1306 4.925054 CCATTGTTCGTGAATGAAGCATTT 59.075 37.500 0.00 0.00 33.90 2.32
568 1307 4.487948 CCATTGTTCGTGAATGAAGCATT 58.512 39.130 0.00 0.00 36.72 3.56
569 1308 3.674138 GCCATTGTTCGTGAATGAAGCAT 60.674 43.478 0.00 0.00 33.36 3.79
570 1309 2.351641 GCCATTGTTCGTGAATGAAGCA 60.352 45.455 0.00 0.00 33.36 3.91
571 1310 2.095059 AGCCATTGTTCGTGAATGAAGC 60.095 45.455 0.00 0.00 33.36 3.86
572 1311 3.058016 ACAGCCATTGTTCGTGAATGAAG 60.058 43.478 0.00 0.00 36.31 3.02
573 1312 2.884012 ACAGCCATTGTTCGTGAATGAA 59.116 40.909 0.00 0.00 36.31 2.57
574 1313 2.483877 GACAGCCATTGTTCGTGAATGA 59.516 45.455 0.00 0.00 41.05 2.57
575 1314 2.414559 GGACAGCCATTGTTCGTGAATG 60.415 50.000 0.00 0.00 41.05 2.67
576 1315 1.812571 GGACAGCCATTGTTCGTGAAT 59.187 47.619 0.00 0.00 41.05 2.57
577 1316 1.234821 GGACAGCCATTGTTCGTGAA 58.765 50.000 0.00 0.00 41.05 3.18
578 1317 0.107643 TGGACAGCCATTGTTCGTGA 59.892 50.000 0.00 0.00 41.05 4.35
579 1318 0.518636 CTGGACAGCCATTGTTCGTG 59.481 55.000 0.00 0.00 44.91 4.35
580 1319 0.396435 TCTGGACAGCCATTGTTCGT 59.604 50.000 0.00 0.00 44.91 3.85
581 1320 1.081892 CTCTGGACAGCCATTGTTCG 58.918 55.000 0.00 0.00 44.91 3.95
582 1321 2.479566 TCTCTGGACAGCCATTGTTC 57.520 50.000 0.00 0.00 44.91 3.18
583 1322 2.957402 TTCTCTGGACAGCCATTGTT 57.043 45.000 0.00 0.00 44.91 2.83
584 1323 2.887152 GTTTTCTCTGGACAGCCATTGT 59.113 45.455 0.00 0.00 44.91 2.71
585 1324 2.886523 TGTTTTCTCTGGACAGCCATTG 59.113 45.455 0.00 0.00 44.91 2.82
586 1325 2.887152 GTGTTTTCTCTGGACAGCCATT 59.113 45.455 0.00 0.00 44.91 3.16
587 1326 2.107204 AGTGTTTTCTCTGGACAGCCAT 59.893 45.455 0.00 0.00 44.91 4.40
588 1327 1.490490 AGTGTTTTCTCTGGACAGCCA 59.510 47.619 0.00 0.00 43.47 4.75
589 1328 2.262423 AGTGTTTTCTCTGGACAGCC 57.738 50.000 0.00 0.00 0.00 4.85
590 1329 2.739379 GCTAGTGTTTTCTCTGGACAGC 59.261 50.000 0.00 0.00 0.00 4.40
591 1330 3.993081 CAGCTAGTGTTTTCTCTGGACAG 59.007 47.826 0.00 0.00 0.00 3.51
592 1331 3.244215 CCAGCTAGTGTTTTCTCTGGACA 60.244 47.826 3.42 0.00 42.64 4.02
593 1332 3.244249 ACCAGCTAGTGTTTTCTCTGGAC 60.244 47.826 13.66 0.00 42.64 4.02
594 1333 2.972713 ACCAGCTAGTGTTTTCTCTGGA 59.027 45.455 13.66 0.00 42.64 3.86
595 1334 3.070018 CACCAGCTAGTGTTTTCTCTGG 58.930 50.000 3.89 7.09 44.80 3.86
596 1335 3.070018 CCACCAGCTAGTGTTTTCTCTG 58.930 50.000 11.43 0.00 35.93 3.35
597 1336 2.551071 GCCACCAGCTAGTGTTTTCTCT 60.551 50.000 11.43 0.00 38.99 3.10
598 1337 1.807142 GCCACCAGCTAGTGTTTTCTC 59.193 52.381 11.43 0.00 38.99 2.87
599 1338 1.142870 TGCCACCAGCTAGTGTTTTCT 59.857 47.619 11.43 0.00 44.23 2.52
600 1339 1.604604 TGCCACCAGCTAGTGTTTTC 58.395 50.000 11.43 0.00 44.23 2.29
601 1340 2.292828 ATGCCACCAGCTAGTGTTTT 57.707 45.000 11.43 0.00 44.23 2.43
602 1341 3.652057 ATATGCCACCAGCTAGTGTTT 57.348 42.857 11.43 0.00 44.23 2.83
603 1342 4.982241 ATATATGCCACCAGCTAGTGTT 57.018 40.909 11.43 0.00 44.23 3.32
604 1343 6.433847 TTTATATATGCCACCAGCTAGTGT 57.566 37.500 11.43 0.00 44.23 3.55
605 1344 7.607607 TCATTTTATATATGCCACCAGCTAGTG 59.392 37.037 5.18 5.18 44.23 2.74
606 1345 7.689299 TCATTTTATATATGCCACCAGCTAGT 58.311 34.615 0.00 0.00 44.23 2.57
607 1346 8.565896 TTCATTTTATATATGCCACCAGCTAG 57.434 34.615 0.00 0.00 44.23 3.42
608 1347 8.932434 TTTCATTTTATATATGCCACCAGCTA 57.068 30.769 0.00 0.00 44.23 3.32
609 1348 7.838079 TTTCATTTTATATATGCCACCAGCT 57.162 32.000 0.00 0.00 44.23 4.24
610 1349 9.492973 AATTTTCATTTTATATATGCCACCAGC 57.507 29.630 0.00 0.00 44.14 4.85
612 1351 9.775854 CCAATTTTCATTTTATATATGCCACCA 57.224 29.630 0.00 0.00 0.00 4.17
613 1352 9.777297 ACCAATTTTCATTTTATATATGCCACC 57.223 29.630 0.00 0.00 0.00 4.61
625 1364 9.492973 CAGGAACATCTAACCAATTTTCATTTT 57.507 29.630 0.00 0.00 0.00 1.82
626 1365 7.603784 GCAGGAACATCTAACCAATTTTCATTT 59.396 33.333 0.00 0.00 0.00 2.32
627 1366 7.099120 GCAGGAACATCTAACCAATTTTCATT 58.901 34.615 0.00 0.00 0.00 2.57
628 1367 6.351286 GGCAGGAACATCTAACCAATTTTCAT 60.351 38.462 0.00 0.00 0.00 2.57
629 1368 5.047377 GGCAGGAACATCTAACCAATTTTCA 60.047 40.000 0.00 0.00 0.00 2.69
630 1369 5.185828 AGGCAGGAACATCTAACCAATTTTC 59.814 40.000 0.00 0.00 0.00 2.29
631 1370 5.086621 AGGCAGGAACATCTAACCAATTTT 58.913 37.500 0.00 0.00 0.00 1.82
632 1371 4.677182 AGGCAGGAACATCTAACCAATTT 58.323 39.130 0.00 0.00 0.00 1.82
633 1372 4.322057 AGGCAGGAACATCTAACCAATT 57.678 40.909 0.00 0.00 0.00 2.32
634 1373 4.687219 GCTAGGCAGGAACATCTAACCAAT 60.687 45.833 0.00 0.00 0.00 3.16
635 1374 3.370527 GCTAGGCAGGAACATCTAACCAA 60.371 47.826 0.00 0.00 0.00 3.67
636 1375 2.170607 GCTAGGCAGGAACATCTAACCA 59.829 50.000 0.00 0.00 0.00 3.67
637 1376 2.485657 GGCTAGGCAGGAACATCTAACC 60.486 54.545 12.16 0.00 0.00 2.85
638 1377 2.436173 AGGCTAGGCAGGAACATCTAAC 59.564 50.000 19.70 0.00 0.00 2.34
639 1378 2.764269 AGGCTAGGCAGGAACATCTAA 58.236 47.619 19.70 0.00 0.00 2.10
640 1379 2.435805 CAAGGCTAGGCAGGAACATCTA 59.564 50.000 19.70 0.00 0.00 1.98
641 1380 1.211457 CAAGGCTAGGCAGGAACATCT 59.789 52.381 19.70 0.00 0.00 2.90
642 1381 1.673168 CAAGGCTAGGCAGGAACATC 58.327 55.000 19.70 0.00 0.00 3.06
643 1382 0.257039 CCAAGGCTAGGCAGGAACAT 59.743 55.000 19.70 0.00 0.00 2.71
644 1383 1.133809 ACCAAGGCTAGGCAGGAACA 61.134 55.000 27.31 0.00 0.00 3.18
645 1384 0.038310 AACCAAGGCTAGGCAGGAAC 59.962 55.000 27.31 0.00 0.00 3.62
646 1385 0.328258 GAACCAAGGCTAGGCAGGAA 59.672 55.000 27.31 0.00 0.00 3.36
647 1386 1.562672 GGAACCAAGGCTAGGCAGGA 61.563 60.000 27.31 0.00 0.00 3.86
648 1387 1.077429 GGAACCAAGGCTAGGCAGG 60.077 63.158 19.70 20.68 0.00 4.85
649 1388 4.645809 GGAACCAAGGCTAGGCAG 57.354 61.111 19.70 10.30 0.00 4.85
662 1401 1.346722 CCGGACTATGTATGGGGGAAC 59.653 57.143 0.00 0.00 0.00 3.62
663 1402 1.724545 CCGGACTATGTATGGGGGAA 58.275 55.000 0.00 0.00 0.00 3.97
664 1403 0.178915 CCCGGACTATGTATGGGGGA 60.179 60.000 0.73 0.00 36.16 4.81
665 1404 0.473117 ACCCGGACTATGTATGGGGG 60.473 60.000 0.73 0.00 44.47 5.40
666 1405 0.974383 GACCCGGACTATGTATGGGG 59.026 60.000 0.73 0.00 44.47 4.96
667 1406 0.974383 GGACCCGGACTATGTATGGG 59.026 60.000 0.73 5.51 45.70 4.00
668 1407 1.618837 CAGGACCCGGACTATGTATGG 59.381 57.143 0.73 0.00 0.00 2.74
669 1408 1.000955 GCAGGACCCGGACTATGTATG 59.999 57.143 0.73 0.00 0.00 2.39
670 1409 1.339097 GCAGGACCCGGACTATGTAT 58.661 55.000 0.73 0.00 0.00 2.29
671 1410 0.757935 GGCAGGACCCGGACTATGTA 60.758 60.000 0.73 0.00 0.00 2.29
672 1411 2.064581 GGCAGGACCCGGACTATGT 61.065 63.158 0.73 0.00 0.00 2.29
673 1412 1.622607 TTGGCAGGACCCGGACTATG 61.623 60.000 0.73 0.00 37.83 2.23
674 1413 0.912487 TTTGGCAGGACCCGGACTAT 60.912 55.000 0.73 0.00 37.83 2.12
675 1414 1.128809 TTTTGGCAGGACCCGGACTA 61.129 55.000 0.73 0.00 37.83 2.59
676 1415 2.457323 TTTTGGCAGGACCCGGACT 61.457 57.895 0.73 0.00 37.83 3.85
677 1416 2.114411 TTTTGGCAGGACCCGGAC 59.886 61.111 0.73 0.00 37.83 4.79
678 1417 2.114411 GTTTTGGCAGGACCCGGA 59.886 61.111 0.73 0.00 37.83 5.14
679 1418 3.361977 CGTTTTGGCAGGACCCGG 61.362 66.667 0.00 0.00 37.83 5.73
680 1419 4.038080 GCGTTTTGGCAGGACCCG 62.038 66.667 0.00 0.00 37.83 5.28
681 1420 3.680786 GGCGTTTTGGCAGGACCC 61.681 66.667 0.00 0.00 44.08 4.46
703 1442 0.246635 AGGTGTAGGCATCACGACAC 59.753 55.000 0.00 0.00 43.44 3.67
742 1481 1.706301 CACAGATTGACTCGCTGCG 59.294 57.895 17.25 17.25 33.03 5.18
804 1563 2.096819 TCGTGCGATCAAATAAAAGGCC 59.903 45.455 0.00 0.00 0.00 5.19
807 1566 5.611596 CGTGTATCGTGCGATCAAATAAAAG 59.388 40.000 10.52 0.00 36.17 2.27
913 1673 1.138883 CGTTAGCTAGCAGCCACGA 59.861 57.895 18.83 0.00 45.83 4.35
915 1675 1.140407 CGTCGTTAGCTAGCAGCCAC 61.140 60.000 18.83 6.52 43.77 5.01
917 1677 0.592754 CTCGTCGTTAGCTAGCAGCC 60.593 60.000 18.83 2.35 43.77 4.85
941 1701 4.246458 CAGTACTCTGGTTTACTTGGCTC 58.754 47.826 0.00 0.00 37.97 4.70
945 1705 3.997021 CTGGCAGTACTCTGGTTTACTTG 59.003 47.826 6.28 0.00 41.57 3.16
1105 1877 4.962836 GTGCCACAGCTGCCACCT 62.963 66.667 15.27 0.00 40.80 4.00
1417 2189 4.131088 GAGACGGACGGTGGAGCC 62.131 72.222 0.00 0.00 0.00 4.70
1418 2190 4.477975 CGAGACGGACGGTGGAGC 62.478 72.222 0.00 0.00 0.00 4.70
1419 2191 2.113433 ATCGAGACGGACGGTGGAG 61.113 63.158 0.00 0.00 0.00 3.86
1420 2192 2.045634 ATCGAGACGGACGGTGGA 60.046 61.111 0.00 0.00 0.00 4.02
1421 2193 2.102357 CATCGAGACGGACGGTGG 59.898 66.667 0.00 0.00 38.07 4.61
1422 2194 2.102357 CCATCGAGACGGACGGTG 59.898 66.667 0.00 0.00 40.85 4.94
1423 2195 1.930908 GAACCATCGAGACGGACGGT 61.931 60.000 5.39 0.00 0.00 4.83
1424 2196 1.226603 GAACCATCGAGACGGACGG 60.227 63.158 5.39 0.00 0.00 4.79
1425 2197 4.379221 GAACCATCGAGACGGACG 57.621 61.111 5.39 0.00 0.00 4.79
1446 2225 4.527944 CATCAGGACGGCTAGATAGGATA 58.472 47.826 0.00 0.00 0.00 2.59
1449 2228 1.821753 CCATCAGGACGGCTAGATAGG 59.178 57.143 0.00 0.00 36.89 2.57
1529 2334 6.011981 AGTCCAACAAGGGATGAGGTAAAATA 60.012 38.462 0.00 0.00 39.62 1.40
1532 2337 3.655777 AGTCCAACAAGGGATGAGGTAAA 59.344 43.478 0.00 0.00 39.62 2.01
1537 2342 2.417924 CGAGAGTCCAACAAGGGATGAG 60.418 54.545 0.00 0.00 39.62 2.90
1539 2344 2.009042 GCGAGAGTCCAACAAGGGATG 61.009 57.143 0.00 0.00 39.62 3.51
1542 2347 0.671781 CAGCGAGAGTCCAACAAGGG 60.672 60.000 0.00 0.00 38.24 3.95
1543 2348 1.294659 GCAGCGAGAGTCCAACAAGG 61.295 60.000 0.00 0.00 39.47 3.61
1558 2363 5.741040 GCAGTTGAGTAGAAAAATATGCAGC 59.259 40.000 0.00 0.00 0.00 5.25
1560 2365 6.623549 GCTGCAGTTGAGTAGAAAAATATGCA 60.624 38.462 16.64 0.00 37.59 3.96
1573 2378 0.322975 AGATTCCGCTGCAGTTGAGT 59.677 50.000 16.64 8.86 0.00 3.41
1576 2381 0.445436 GACAGATTCCGCTGCAGTTG 59.555 55.000 16.64 8.37 39.51 3.16
1602 2407 9.525409 CATTTTACCTGCTTATACTACTACGTT 57.475 33.333 0.00 0.00 0.00 3.99
1604 2409 9.525409 AACATTTTACCTGCTTATACTACTACG 57.475 33.333 0.00 0.00 0.00 3.51
1607 2412 7.827236 TGCAACATTTTACCTGCTTATACTACT 59.173 33.333 0.00 0.00 35.78 2.57
1625 2430 5.957798 CTGGATGACAGTAAATGCAACATT 58.042 37.500 0.00 0.00 42.42 2.71
1626 2431 5.571784 CTGGATGACAGTAAATGCAACAT 57.428 39.130 0.00 0.00 42.42 2.71
1691 2751 3.638160 AGTGGTTGATTTGATTGTGCAGT 59.362 39.130 0.00 0.00 0.00 4.40
1698 2758 6.094603 GCAGACTATGAGTGGTTGATTTGATT 59.905 38.462 0.00 0.00 0.00 2.57
1701 2761 4.940046 AGCAGACTATGAGTGGTTGATTTG 59.060 41.667 0.00 0.00 0.00 2.32
1706 2766 3.056250 ACTGAGCAGACTATGAGTGGTTG 60.056 47.826 4.21 0.00 0.00 3.77
1710 2770 2.738000 GCCACTGAGCAGACTATGAGTG 60.738 54.545 4.21 0.00 31.77 3.51
1739 2799 5.975693 TTTCCTCTAAAAATGGCGTTCAT 57.024 34.783 0.00 0.00 37.79 2.57
1763 2823 1.134310 ACCGACGGAACTTTCCTGTTT 60.134 47.619 23.38 0.00 45.33 2.83
1764 2824 0.466963 ACCGACGGAACTTTCCTGTT 59.533 50.000 23.38 0.00 45.33 3.16
1765 2825 1.271656 CTACCGACGGAACTTTCCTGT 59.728 52.381 23.38 5.94 45.33 4.00
1780 2840 0.670546 CACTGCCAAGTCACCTACCG 60.671 60.000 0.00 0.00 32.98 4.02
1786 2846 1.227943 TCAGCCACTGCCAAGTCAC 60.228 57.895 0.00 0.00 38.69 3.67
1791 2851 0.467844 AACATGTCAGCCACTGCCAA 60.468 50.000 0.00 0.00 38.69 4.52
1792 2852 0.399833 TAACATGTCAGCCACTGCCA 59.600 50.000 0.00 0.00 38.69 4.92
1793 2853 1.089920 CTAACATGTCAGCCACTGCC 58.910 55.000 0.00 0.00 38.69 4.85
1795 2855 2.485426 CCAACTAACATGTCAGCCACTG 59.515 50.000 0.00 0.00 0.00 3.66
1833 3529 9.178758 CCAGCAATTTCCTCTAACTTAACTTAT 57.821 33.333 0.00 0.00 0.00 1.73
1863 3621 9.787435 TGTTGTAATCCAGTTGATAACTTACTT 57.213 29.630 0.00 0.00 40.46 2.24
1864 3622 9.216117 GTGTTGTAATCCAGTTGATAACTTACT 57.784 33.333 0.00 0.00 40.46 2.24
1865 3623 8.995220 TGTGTTGTAATCCAGTTGATAACTTAC 58.005 33.333 0.00 0.00 40.46 2.34
2027 3851 1.138266 AGAAAGCACACCACGTGTAGT 59.862 47.619 15.65 9.56 45.65 2.73
2132 3956 0.934436 CACAAAGGCAAACGCTTCCG 60.934 55.000 0.00 0.00 41.14 4.30
2184 4008 2.056223 CGGTGACCCCACGATAGGT 61.056 63.158 0.00 0.00 44.09 3.08
2329 4153 0.248743 GGATACGAACGGCATGACGA 60.249 55.000 31.27 4.41 37.61 4.20
2430 4254 0.107508 ACACCATCTGGGATGCTTCG 60.108 55.000 0.54 0.00 41.15 3.79
2453 4277 3.449528 TCTTCATCATCGAGCTTGAGG 57.550 47.619 9.43 9.43 0.00 3.86
2811 4635 3.717350 GCACATGCAAAATCAAGAAGC 57.283 42.857 0.00 0.00 41.59 3.86
2833 4657 0.179029 AACCAAACCTCACCCTGTCG 60.179 55.000 0.00 0.00 0.00 4.35
3258 5100 3.199071 ACATCCCCGTGCTAACATCTTTA 59.801 43.478 0.00 0.00 0.00 1.85
3269 5111 2.983030 TGTGCAACATCCCCGTGC 60.983 61.111 0.00 0.00 45.67 5.34
3328 5173 7.979444 AAACTAAGCTAGACATTAGCACAAA 57.021 32.000 8.69 0.00 42.68 2.83
3432 5286 8.387190 ACAGGAGGTTGTTAACACTATAAAAC 57.613 34.615 8.07 1.66 0.00 2.43
3504 5359 3.909430 TCGACAGTCATGAGTAACAACC 58.091 45.455 1.86 0.00 0.00 3.77
3506 5361 5.597806 ACTTTCGACAGTCATGAGTAACAA 58.402 37.500 1.86 0.00 0.00 2.83
3507 5362 5.196341 ACTTTCGACAGTCATGAGTAACA 57.804 39.130 1.86 0.00 0.00 2.41
3510 5365 7.541091 GTCAATAACTTTCGACAGTCATGAGTA 59.459 37.037 4.39 0.00 0.00 2.59
3513 5368 6.366061 CAGTCAATAACTTTCGACAGTCATGA 59.634 38.462 4.39 7.22 35.45 3.07
3514 5369 6.528826 CAGTCAATAACTTTCGACAGTCATG 58.471 40.000 4.39 5.06 35.45 3.07
3516 5371 4.447724 GCAGTCAATAACTTTCGACAGTCA 59.552 41.667 4.39 0.00 35.45 3.41
3517 5372 4.433022 CGCAGTCAATAACTTTCGACAGTC 60.433 45.833 4.39 0.00 35.45 3.51
3519 5374 3.428870 ACGCAGTCAATAACTTTCGACAG 59.571 43.478 0.00 0.00 29.74 3.51
3521 5376 4.383679 GAACGCAGTCAATAACTTTCGAC 58.616 43.478 0.00 0.00 45.00 4.20
3522 5377 3.120616 CGAACGCAGTCAATAACTTTCGA 59.879 43.478 5.12 0.00 45.00 3.71
3523 5378 3.395671 CGAACGCAGTCAATAACTTTCG 58.604 45.455 0.00 0.00 45.00 3.46
3524 5379 3.732943 CCGAACGCAGTCAATAACTTTC 58.267 45.455 0.00 0.00 45.00 2.62
3525 5380 2.095919 GCCGAACGCAGTCAATAACTTT 60.096 45.455 0.00 0.00 45.00 2.66
3527 5382 1.076332 GCCGAACGCAGTCAATAACT 58.924 50.000 0.00 0.00 45.00 2.24
3528 5383 0.793861 TGCCGAACGCAGTCAATAAC 59.206 50.000 0.00 0.00 45.00 1.89
3529 5384 3.218844 TGCCGAACGCAGTCAATAA 57.781 47.368 0.00 0.00 45.00 1.40
3530 5385 4.999212 TGCCGAACGCAGTCAATA 57.001 50.000 0.00 0.00 45.00 1.90
3540 5395 4.681978 ACAGTCGCCCTGCCGAAC 62.682 66.667 2.29 0.00 45.68 3.95
3543 5398 4.988598 ACAACAGTCGCCCTGCCG 62.989 66.667 2.29 0.00 45.68 5.69
3544 5399 2.594592 AACAACAGTCGCCCTGCC 60.595 61.111 2.29 0.00 45.68 4.85
3545 5400 1.237285 ATGAACAACAGTCGCCCTGC 61.237 55.000 2.29 0.00 45.68 4.85
3548 5403 0.951558 ACAATGAACAACAGTCGCCC 59.048 50.000 0.00 0.00 0.00 6.13
3549 5404 1.925946 GCACAATGAACAACAGTCGCC 60.926 52.381 0.00 0.00 0.00 5.54
3550 5405 1.002468 AGCACAATGAACAACAGTCGC 60.002 47.619 0.00 0.00 0.00 5.19
3551 5406 2.660094 CGAGCACAATGAACAACAGTCG 60.660 50.000 0.00 0.00 0.00 4.18
3552 5407 2.349817 CCGAGCACAATGAACAACAGTC 60.350 50.000 0.00 0.00 0.00 3.51
3553 5408 1.603802 CCGAGCACAATGAACAACAGT 59.396 47.619 0.00 0.00 0.00 3.55
3555 5410 0.950836 CCCGAGCACAATGAACAACA 59.049 50.000 0.00 0.00 0.00 3.33
3556 5411 1.234821 TCCCGAGCACAATGAACAAC 58.765 50.000 0.00 0.00 0.00 3.32
3557 5412 1.879380 CTTCCCGAGCACAATGAACAA 59.121 47.619 0.00 0.00 0.00 2.83
3558 5413 1.522668 CTTCCCGAGCACAATGAACA 58.477 50.000 0.00 0.00 0.00 3.18
3559 5414 0.804989 CCTTCCCGAGCACAATGAAC 59.195 55.000 0.00 0.00 0.00 3.18
3561 5416 1.271856 TACCTTCCCGAGCACAATGA 58.728 50.000 0.00 0.00 0.00 2.57
3562 5417 2.107950 TTACCTTCCCGAGCACAATG 57.892 50.000 0.00 0.00 0.00 2.82
3565 5420 0.981183 ACATTACCTTCCCGAGCACA 59.019 50.000 0.00 0.00 0.00 4.57
3566 5421 1.369625 CACATTACCTTCCCGAGCAC 58.630 55.000 0.00 0.00 0.00 4.40
3568 5423 0.252197 ACCACATTACCTTCCCGAGC 59.748 55.000 0.00 0.00 0.00 5.03
3569 5424 2.483188 GCTACCACATTACCTTCCCGAG 60.483 54.545 0.00 0.00 0.00 4.63
3571 5426 1.805120 CGCTACCACATTACCTTCCCG 60.805 57.143 0.00 0.00 0.00 5.14
3574 5429 2.018542 TGCGCTACCACATTACCTTC 57.981 50.000 9.73 0.00 0.00 3.46
3575 5430 2.288666 CATGCGCTACCACATTACCTT 58.711 47.619 9.73 0.00 0.00 3.50
3576 5431 1.475034 CCATGCGCTACCACATTACCT 60.475 52.381 9.73 0.00 0.00 3.08
3577 5432 0.944386 CCATGCGCTACCACATTACC 59.056 55.000 9.73 0.00 0.00 2.85
3578 5433 0.944386 CCCATGCGCTACCACATTAC 59.056 55.000 9.73 0.00 0.00 1.89
3580 5435 2.120909 GCCCATGCGCTACCACATT 61.121 57.895 9.73 0.00 0.00 2.71
3581 5436 2.516930 GCCCATGCGCTACCACAT 60.517 61.111 9.73 0.00 0.00 3.21
3582 5437 3.266686 AAGCCCATGCGCTACCACA 62.267 57.895 9.73 0.00 44.33 4.17
3583 5438 2.438434 AAGCCCATGCGCTACCAC 60.438 61.111 9.73 0.00 44.33 4.16
3584 5439 2.438254 CAAGCCCATGCGCTACCA 60.438 61.111 9.73 0.00 44.33 3.25
3585 5440 3.892581 GCAAGCCCATGCGCTACC 61.893 66.667 9.73 0.00 44.33 3.18
3596 5451 0.810426 GTAACTAGCCCGAGCAAGCC 60.810 60.000 0.00 0.00 43.56 4.35
3597 5452 0.108329 TGTAACTAGCCCGAGCAAGC 60.108 55.000 0.00 0.00 43.56 4.01
3598 5453 1.476891 TCTGTAACTAGCCCGAGCAAG 59.523 52.381 0.00 0.00 43.56 4.01
3599 5454 1.476891 CTCTGTAACTAGCCCGAGCAA 59.523 52.381 0.00 0.00 43.56 3.91
3600 5455 1.103803 CTCTGTAACTAGCCCGAGCA 58.896 55.000 0.00 0.00 43.56 4.26
3601 5456 0.386113 CCTCTGTAACTAGCCCGAGC 59.614 60.000 0.00 0.00 40.32 5.03
3602 5457 2.054232 TCCTCTGTAACTAGCCCGAG 57.946 55.000 0.00 0.00 0.00 4.63
3603 5458 2.519771 TTCCTCTGTAACTAGCCCGA 57.480 50.000 0.00 0.00 0.00 5.14
3604 5459 3.821421 ATTTCCTCTGTAACTAGCCCG 57.179 47.619 0.00 0.00 0.00 6.13
3605 5460 6.659668 AGAAAAATTTCCTCTGTAACTAGCCC 59.340 38.462 2.37 0.00 37.92 5.19
3607 5462 7.390718 TCCAGAAAAATTTCCTCTGTAACTAGC 59.609 37.037 20.55 0.00 37.92 3.42
3609 5464 8.656806 TCTCCAGAAAAATTTCCTCTGTAACTA 58.343 33.333 20.55 6.67 37.92 2.24
3610 5465 7.518188 TCTCCAGAAAAATTTCCTCTGTAACT 58.482 34.615 20.55 0.00 37.92 2.24
3612 5467 7.445402 CACTCTCCAGAAAAATTTCCTCTGTAA 59.555 37.037 20.55 12.19 37.92 2.41
3614 5469 5.767168 CACTCTCCAGAAAAATTTCCTCTGT 59.233 40.000 20.55 6.86 37.92 3.41
3616 5471 5.320277 CCACTCTCCAGAAAAATTTCCTCT 58.680 41.667 2.37 0.00 37.92 3.69
3617 5472 4.082517 GCCACTCTCCAGAAAAATTTCCTC 60.083 45.833 2.37 0.00 37.92 3.71
3618 5473 3.829026 GCCACTCTCCAGAAAAATTTCCT 59.171 43.478 2.37 0.00 37.92 3.36
3619 5474 3.366374 CGCCACTCTCCAGAAAAATTTCC 60.366 47.826 2.37 0.00 37.92 3.13
3620 5475 3.502211 TCGCCACTCTCCAGAAAAATTTC 59.498 43.478 0.00 0.00 37.45 2.17
3631 5939 1.757699 AGGTTTATCTCGCCACTCTCC 59.242 52.381 0.00 0.00 0.00 3.71
3632 5940 2.223852 GGAGGTTTATCTCGCCACTCTC 60.224 54.545 0.00 0.00 34.74 3.20
3633 5941 1.757699 GGAGGTTTATCTCGCCACTCT 59.242 52.381 0.00 0.00 34.74 3.24
3634 5942 1.757699 AGGAGGTTTATCTCGCCACTC 59.242 52.381 0.00 0.00 34.74 3.51
3635 5943 1.482593 CAGGAGGTTTATCTCGCCACT 59.517 52.381 0.00 0.00 34.74 4.00
3636 5944 1.480954 TCAGGAGGTTTATCTCGCCAC 59.519 52.381 0.00 0.00 34.74 5.01
3637 5945 1.860641 TCAGGAGGTTTATCTCGCCA 58.139 50.000 0.00 0.00 34.74 5.69
3638 5946 3.477210 AATCAGGAGGTTTATCTCGCC 57.523 47.619 0.00 0.00 34.74 5.54
3639 5947 4.698575 AGAAATCAGGAGGTTTATCTCGC 58.301 43.478 0.00 0.00 34.74 5.03
3640 5948 7.493367 AGTAAGAAATCAGGAGGTTTATCTCG 58.507 38.462 0.00 0.00 34.74 4.04
3641 5949 7.929245 GGAGTAAGAAATCAGGAGGTTTATCTC 59.071 40.741 0.00 0.00 0.00 2.75
3642 5950 7.147461 GGGAGTAAGAAATCAGGAGGTTTATCT 60.147 40.741 0.00 0.00 0.00 1.98
3643 5951 6.993308 GGGAGTAAGAAATCAGGAGGTTTATC 59.007 42.308 0.00 0.00 0.00 1.75
3644 5952 6.126449 GGGGAGTAAGAAATCAGGAGGTTTAT 60.126 42.308 0.00 0.00 0.00 1.40
3645 5953 5.191124 GGGGAGTAAGAAATCAGGAGGTTTA 59.809 44.000 0.00 0.00 0.00 2.01
3646 5954 4.018324 GGGGAGTAAGAAATCAGGAGGTTT 60.018 45.833 0.00 0.00 0.00 3.27
3647 5955 3.523972 GGGGAGTAAGAAATCAGGAGGTT 59.476 47.826 0.00 0.00 0.00 3.50
3648 5956 3.116174 GGGGAGTAAGAAATCAGGAGGT 58.884 50.000 0.00 0.00 0.00 3.85
3649 5957 3.388913 AGGGGAGTAAGAAATCAGGAGG 58.611 50.000 0.00 0.00 0.00 4.30
3650 5958 4.141597 GGAAGGGGAGTAAGAAATCAGGAG 60.142 50.000 0.00 0.00 0.00 3.69
3651 5959 3.780850 GGAAGGGGAGTAAGAAATCAGGA 59.219 47.826 0.00 0.00 0.00 3.86
3652 5960 3.783082 AGGAAGGGGAGTAAGAAATCAGG 59.217 47.826 0.00 0.00 0.00 3.86
3653 5961 5.189180 CAAGGAAGGGGAGTAAGAAATCAG 58.811 45.833 0.00 0.00 0.00 2.90
3654 5962 4.601857 ACAAGGAAGGGGAGTAAGAAATCA 59.398 41.667 0.00 0.00 0.00 2.57
3655 5963 5.180810 ACAAGGAAGGGGAGTAAGAAATC 57.819 43.478 0.00 0.00 0.00 2.17
3656 5964 6.274908 AGTTACAAGGAAGGGGAGTAAGAAAT 59.725 38.462 0.00 0.00 0.00 2.17
3657 5965 5.609708 AGTTACAAGGAAGGGGAGTAAGAAA 59.390 40.000 0.00 0.00 0.00 2.52
3658 5966 5.012768 CAGTTACAAGGAAGGGGAGTAAGAA 59.987 44.000 0.00 0.00 0.00 2.52
3659 5967 4.530946 CAGTTACAAGGAAGGGGAGTAAGA 59.469 45.833 0.00 0.00 0.00 2.10
3660 5968 4.530946 TCAGTTACAAGGAAGGGGAGTAAG 59.469 45.833 0.00 0.00 0.00 2.34
3661 5969 4.495565 TCAGTTACAAGGAAGGGGAGTAA 58.504 43.478 0.00 0.00 0.00 2.24
3662 5970 4.136341 TCAGTTACAAGGAAGGGGAGTA 57.864 45.455 0.00 0.00 0.00 2.59
3663 5971 2.986050 TCAGTTACAAGGAAGGGGAGT 58.014 47.619 0.00 0.00 0.00 3.85
3664 5972 5.366768 TCATATCAGTTACAAGGAAGGGGAG 59.633 44.000 0.00 0.00 0.00 4.30
3665 5973 5.285401 TCATATCAGTTACAAGGAAGGGGA 58.715 41.667 0.00 0.00 0.00 4.81
3666 5974 5.630415 TCATATCAGTTACAAGGAAGGGG 57.370 43.478 0.00 0.00 0.00 4.79
3667 5975 9.799106 AATAATCATATCAGTTACAAGGAAGGG 57.201 33.333 0.00 0.00 0.00 3.95
3685 5993 9.528018 CGGCAACCTTTATTAAACAATAATCAT 57.472 29.630 0.00 0.00 0.00 2.45
3686 5994 8.740906 TCGGCAACCTTTATTAAACAATAATCA 58.259 29.630 0.00 0.00 0.00 2.57
3687 5995 9.575783 TTCGGCAACCTTTATTAAACAATAATC 57.424 29.630 0.00 0.00 0.00 1.75
3689 5997 9.575783 GATTCGGCAACCTTTATTAAACAATAA 57.424 29.630 0.00 0.00 0.00 1.40
3690 5998 8.962679 AGATTCGGCAACCTTTATTAAACAATA 58.037 29.630 0.00 0.00 0.00 1.90
3691 5999 7.836842 AGATTCGGCAACCTTTATTAAACAAT 58.163 30.769 0.00 0.00 0.00 2.71
3692 6000 7.222000 AGATTCGGCAACCTTTATTAAACAA 57.778 32.000 0.00 0.00 0.00 2.83
3693 6001 6.827586 AGATTCGGCAACCTTTATTAAACA 57.172 33.333 0.00 0.00 0.00 2.83
3694 6002 9.628746 TTTTAGATTCGGCAACCTTTATTAAAC 57.371 29.630 0.00 0.00 0.00 2.01
3777 6085 2.045926 GTGATGGAGTTGCCGCCT 60.046 61.111 0.00 0.00 40.66 5.52
3784 6092 2.434884 CGCAGCCGTGATGGAGTT 60.435 61.111 0.00 0.00 42.00 3.01
3795 6103 3.497031 GCCGGTAAACTCGCAGCC 61.497 66.667 1.90 0.00 0.00 4.85
3814 6122 3.387947 CCGGTGGCTAGGTTCCGT 61.388 66.667 0.00 0.00 41.17 4.69
3816 6124 2.267961 CACCGGTGGCTAGGTTCC 59.732 66.667 27.57 0.00 39.00 3.62
3873 6181 4.271807 TCTTGGGTACAGATCAGATCCT 57.728 45.455 6.80 0.00 0.00 3.24
3874 6182 4.262808 CCATCTTGGGTACAGATCAGATCC 60.263 50.000 6.80 0.00 32.67 3.36
3959 7481 3.192001 AGTTCGTTATCGTCCAAGTGCTA 59.808 43.478 0.00 0.00 38.33 3.49
4021 7551 0.750546 GCCATCTTGCATCTGCCTCA 60.751 55.000 0.00 0.00 41.18 3.86
4065 7595 6.018669 GCTGATGAACTAATTAAAGGGACGAG 60.019 42.308 0.00 0.00 0.00 4.18
4074 7604 6.754675 TCGAACATCGCTGATGAACTAATTAA 59.245 34.615 20.36 0.00 42.09 1.40
4075 7605 6.270064 TCGAACATCGCTGATGAACTAATTA 58.730 36.000 20.36 0.00 42.09 1.40
4076 7606 5.109210 TCGAACATCGCTGATGAACTAATT 58.891 37.500 20.36 7.28 42.09 1.40
4077 7607 4.682787 TCGAACATCGCTGATGAACTAAT 58.317 39.130 20.36 0.20 42.09 1.73
4194 7903 0.460284 CCATGGACGACCTTCTTCCG 60.460 60.000 5.56 0.00 37.60 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.