Multiple sequence alignment - TraesCS2B01G508800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G508800 chr2B 100.000 1922 0 0 1 1922 705020486 705022407 0.000000e+00 3550
1 TraesCS2B01G508800 chr2B 100.000 172 0 0 2456 2627 705022941 705023112 4.220000e-83 318
2 TraesCS2B01G508800 chr2A 93.017 802 36 8 853 1637 718933744 718934542 0.000000e+00 1153
3 TraesCS2B01G508800 chr6B 89.189 851 83 8 1 844 680612854 680613702 0.000000e+00 1053
4 TraesCS2B01G508800 chr1B 88.993 854 84 9 1 847 94159405 94158555 0.000000e+00 1048
5 TraesCS2B01G508800 chr4A 88.033 844 69 19 10 847 695972999 695972182 0.000000e+00 970
6 TraesCS2B01G508800 chr2D 96.016 502 20 0 1126 1627 584797946 584798447 0.000000e+00 817
7 TraesCS2B01G508800 chr2D 93.478 138 8 1 945 1082 584797810 584797946 1.230000e-48 204
8 TraesCS2B01G508800 chr7D 81.348 831 105 19 19 839 11266868 11266078 4.770000e-177 630
9 TraesCS2B01G508800 chr7D 84.234 222 30 5 151 368 51169841 51169621 7.370000e-51 211
10 TraesCS2B01G508800 chr7B 80.347 692 99 26 151 830 649138925 649139591 8.450000e-135 490
11 TraesCS2B01G508800 chr7B 80.058 692 101 26 151 830 649148734 649149400 1.830000e-131 479
12 TraesCS2B01G508800 chr7A 87.245 196 24 1 156 350 630031419 630031224 3.400000e-54 222
13 TraesCS2B01G508800 chr5D 81.319 273 43 7 133 401 467703493 467703761 5.690000e-52 215


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G508800 chr2B 705020486 705023112 2626 False 1934.0 3550 100.000 1 2627 2 chr2B.!!$F1 2626
1 TraesCS2B01G508800 chr2A 718933744 718934542 798 False 1153.0 1153 93.017 853 1637 1 chr2A.!!$F1 784
2 TraesCS2B01G508800 chr6B 680612854 680613702 848 False 1053.0 1053 89.189 1 844 1 chr6B.!!$F1 843
3 TraesCS2B01G508800 chr1B 94158555 94159405 850 True 1048.0 1048 88.993 1 847 1 chr1B.!!$R1 846
4 TraesCS2B01G508800 chr4A 695972182 695972999 817 True 970.0 970 88.033 10 847 1 chr4A.!!$R1 837
5 TraesCS2B01G508800 chr2D 584797810 584798447 637 False 510.5 817 94.747 945 1627 2 chr2D.!!$F1 682
6 TraesCS2B01G508800 chr7D 11266078 11266868 790 True 630.0 630 81.348 19 839 1 chr7D.!!$R1 820
7 TraesCS2B01G508800 chr7B 649138925 649139591 666 False 490.0 490 80.347 151 830 1 chr7B.!!$F1 679
8 TraesCS2B01G508800 chr7B 649148734 649149400 666 False 479.0 479 80.058 151 830 1 chr7B.!!$F2 679

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
600 611 0.179059 TTGGAGCACGTTCTTGCAGA 60.179 50.0 4.28 0.0 45.62 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1710 1742 0.033504 GGAGAGAACACAAGACGGCA 59.966 55.0 0.0 0.0 0.0 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.963371 GTCTTCCAGTCGCGAGGT 59.037 61.111 10.24 0.00 0.00 3.85
39 40 2.618709 GCAGTATGGCCAATAGGTTGTC 59.381 50.000 10.96 0.00 35.86 3.18
100 104 4.801516 GGTTACAGCAAAAACATTGTCGTT 59.198 37.500 0.00 0.00 0.00 3.85
112 116 1.013596 TTGTCGTTGCTGTCACAAGG 58.986 50.000 0.00 0.00 36.89 3.61
248 254 2.262637 AGTAAAATCCCTCACCGGTGA 58.737 47.619 34.13 34.13 38.06 4.02
309 317 0.317479 AAAGTAGGTCGCAGCTTCGT 59.683 50.000 5.50 0.00 0.00 3.85
591 602 0.613260 TATGCCTTCTTGGAGCACGT 59.387 50.000 0.00 0.00 39.77 4.49
594 605 0.603975 GCCTTCTTGGAGCACGTTCT 60.604 55.000 0.00 0.00 38.35 3.01
600 611 0.179059 TTGGAGCACGTTCTTGCAGA 60.179 50.000 4.28 0.00 45.62 4.26
602 613 0.601311 GGAGCACGTTCTTGCAGAGT 60.601 55.000 4.28 0.00 45.62 3.24
607 618 2.352421 GCACGTTCTTGCAGAGTAGGTA 60.352 50.000 0.00 0.00 42.49 3.08
610 621 2.095364 CGTTCTTGCAGAGTAGGTACGT 60.095 50.000 0.00 0.00 0.00 3.57
691 702 1.007387 GCGGGCAAGTTGTTTGAGG 60.007 57.895 4.48 0.00 39.21 3.86
705 716 7.230027 AGTTGTTTGAGGAGATGAAAGAAGAT 58.770 34.615 0.00 0.00 0.00 2.40
844 859 4.356289 GGCGCACCGATTATAAACATTTT 58.644 39.130 10.83 0.00 0.00 1.82
847 862 4.668837 CGCACCGATTATAAACATTTTCCG 59.331 41.667 0.00 0.00 0.00 4.30
848 863 4.973663 GCACCGATTATAAACATTTTCCGG 59.026 41.667 0.00 0.00 40.15 5.14
849 864 5.220892 GCACCGATTATAAACATTTTCCGGA 60.221 40.000 0.00 0.00 37.98 5.14
850 865 6.678409 GCACCGATTATAAACATTTTCCGGAA 60.678 38.462 14.35 14.35 37.98 4.30
851 866 7.422399 CACCGATTATAAACATTTTCCGGAAT 58.578 34.615 19.62 4.10 37.98 3.01
880 899 2.022934 GATCGTTCCGGTCCTACTTCT 58.977 52.381 0.00 0.00 29.89 2.85
893 912 6.517605 GGTCCTACTTCTGGCTCTATAAAAG 58.482 44.000 0.00 0.00 0.00 2.27
894 913 6.324254 GGTCCTACTTCTGGCTCTATAAAAGA 59.676 42.308 0.00 0.00 0.00 2.52
895 914 7.147707 GGTCCTACTTCTGGCTCTATAAAAGAA 60.148 40.741 0.00 0.00 32.46 2.52
930 949 2.297129 GGCTGCTCCTCCTCCACTT 61.297 63.158 0.00 0.00 0.00 3.16
932 951 1.515020 CTGCTCCTCCTCCACTTCG 59.485 63.158 0.00 0.00 0.00 3.79
939 958 0.395862 CTCCTCCACTTCGGGCTCTA 60.396 60.000 0.00 0.00 34.36 2.43
953 972 2.369203 GGGCTCTATAGGGTTCCTCAAC 59.631 54.545 0.59 0.00 34.61 3.18
1025 1052 2.885861 CGAGGAGGGTTCGTCCTG 59.114 66.667 13.07 3.65 46.92 3.86
1157 1187 1.374758 CTCCACGTCCACTCAAGGC 60.375 63.158 0.00 0.00 0.00 4.35
1435 1467 4.423209 AGACCCAGGAGGAGGCCC 62.423 72.222 0.00 0.00 39.89 5.80
1637 1669 0.474854 TGGCCCTGAAGAACTACCCA 60.475 55.000 0.00 0.00 0.00 4.51
1638 1670 0.919710 GGCCCTGAAGAACTACCCAT 59.080 55.000 0.00 0.00 0.00 4.00
1639 1671 1.285078 GGCCCTGAAGAACTACCCATT 59.715 52.381 0.00 0.00 0.00 3.16
1640 1672 2.291605 GGCCCTGAAGAACTACCCATTT 60.292 50.000 0.00 0.00 0.00 2.32
1641 1673 3.431415 GCCCTGAAGAACTACCCATTTT 58.569 45.455 0.00 0.00 0.00 1.82
1642 1674 4.569015 GGCCCTGAAGAACTACCCATTTTA 60.569 45.833 0.00 0.00 0.00 1.52
1643 1675 5.201243 GCCCTGAAGAACTACCCATTTTAT 58.799 41.667 0.00 0.00 0.00 1.40
1644 1676 5.299531 GCCCTGAAGAACTACCCATTTTATC 59.700 44.000 0.00 0.00 0.00 1.75
1645 1677 6.663734 CCCTGAAGAACTACCCATTTTATCT 58.336 40.000 0.00 0.00 0.00 1.98
1646 1678 7.637301 GCCCTGAAGAACTACCCATTTTATCTA 60.637 40.741 0.00 0.00 0.00 1.98
1647 1679 7.715686 CCCTGAAGAACTACCCATTTTATCTAC 59.284 40.741 0.00 0.00 0.00 2.59
1648 1680 7.715686 CCTGAAGAACTACCCATTTTATCTACC 59.284 40.741 0.00 0.00 0.00 3.18
1649 1681 8.388656 TGAAGAACTACCCATTTTATCTACCT 57.611 34.615 0.00 0.00 0.00 3.08
1650 1682 8.265055 TGAAGAACTACCCATTTTATCTACCTG 58.735 37.037 0.00 0.00 0.00 4.00
1651 1683 7.750947 AGAACTACCCATTTTATCTACCTGT 57.249 36.000 0.00 0.00 0.00 4.00
1652 1684 7.793036 AGAACTACCCATTTTATCTACCTGTC 58.207 38.462 0.00 0.00 0.00 3.51
1653 1685 7.624077 AGAACTACCCATTTTATCTACCTGTCT 59.376 37.037 0.00 0.00 0.00 3.41
1654 1686 7.750947 ACTACCCATTTTATCTACCTGTCTT 57.249 36.000 0.00 0.00 0.00 3.01
1655 1687 8.159229 ACTACCCATTTTATCTACCTGTCTTT 57.841 34.615 0.00 0.00 0.00 2.52
1656 1688 8.047310 ACTACCCATTTTATCTACCTGTCTTTG 58.953 37.037 0.00 0.00 0.00 2.77
1657 1689 5.652452 ACCCATTTTATCTACCTGTCTTTGC 59.348 40.000 0.00 0.00 0.00 3.68
1658 1690 5.220854 CCCATTTTATCTACCTGTCTTTGCG 60.221 44.000 0.00 0.00 0.00 4.85
1659 1691 4.939509 TTTTATCTACCTGTCTTTGCGC 57.060 40.909 0.00 0.00 0.00 6.09
1660 1692 3.603158 TTATCTACCTGTCTTTGCGCA 57.397 42.857 5.66 5.66 0.00 6.09
1661 1693 2.698855 ATCTACCTGTCTTTGCGCAT 57.301 45.000 12.75 0.00 0.00 4.73
1662 1694 2.010145 TCTACCTGTCTTTGCGCATC 57.990 50.000 12.75 3.01 0.00 3.91
1663 1695 1.550524 TCTACCTGTCTTTGCGCATCT 59.449 47.619 12.75 0.00 0.00 2.90
1664 1696 2.758423 TCTACCTGTCTTTGCGCATCTA 59.242 45.455 12.75 0.00 0.00 1.98
1665 1697 2.698855 ACCTGTCTTTGCGCATCTAT 57.301 45.000 12.75 0.00 0.00 1.98
1666 1698 2.555199 ACCTGTCTTTGCGCATCTATC 58.445 47.619 12.75 1.82 0.00 2.08
1667 1699 1.524355 CCTGTCTTTGCGCATCTATCG 59.476 52.381 12.75 0.00 0.00 2.92
1668 1700 1.524355 CTGTCTTTGCGCATCTATCGG 59.476 52.381 12.75 2.66 0.00 4.18
1669 1701 1.134818 TGTCTTTGCGCATCTATCGGT 60.135 47.619 12.75 0.00 0.00 4.69
1670 1702 1.523095 GTCTTTGCGCATCTATCGGTC 59.477 52.381 12.75 0.00 0.00 4.79
1671 1703 0.504384 CTTTGCGCATCTATCGGTCG 59.496 55.000 12.75 0.00 0.00 4.79
1672 1704 0.179121 TTTGCGCATCTATCGGTCGT 60.179 50.000 12.75 0.00 0.00 4.34
1673 1705 0.664224 TTGCGCATCTATCGGTCGTA 59.336 50.000 12.75 0.00 0.00 3.43
1674 1706 0.040692 TGCGCATCTATCGGTCGTAC 60.041 55.000 5.66 0.00 0.00 3.67
1675 1707 1.058590 GCGCATCTATCGGTCGTACG 61.059 60.000 9.53 9.53 0.00 3.67
1676 1708 0.234106 CGCATCTATCGGTCGTACGT 59.766 55.000 16.05 0.00 34.94 3.57
1677 1709 1.720860 CGCATCTATCGGTCGTACGTC 60.721 57.143 16.05 9.80 34.94 4.34
1678 1710 1.399471 GCATCTATCGGTCGTACGTCC 60.399 57.143 19.82 19.82 34.94 4.79
1679 1711 1.136419 CATCTATCGGTCGTACGTCCG 60.136 57.143 36.92 36.92 45.47 4.79
1680 1712 1.083144 CTATCGGTCGTACGTCCGC 60.083 63.158 37.50 17.73 44.19 5.54
1681 1713 2.739214 CTATCGGTCGTACGTCCGCG 62.739 65.000 37.50 26.61 44.19 6.46
1683 1715 4.228097 CGGTCGTACGTCCGCGAT 62.228 66.667 33.89 0.00 39.55 4.58
1684 1716 2.649975 GGTCGTACGTCCGCGATG 60.650 66.667 15.57 1.44 42.00 3.84
1685 1717 2.400798 GTCGTACGTCCGCGATGA 59.599 61.111 16.05 0.00 42.00 2.92
1686 1718 1.226101 GTCGTACGTCCGCGATGAA 60.226 57.895 16.05 0.00 42.00 2.57
1687 1719 1.226101 TCGTACGTCCGCGATGAAC 60.226 57.895 16.05 0.00 42.00 3.18
1688 1720 1.512522 CGTACGTCCGCGATGAACA 60.513 57.895 8.23 0.00 42.00 3.18
1689 1721 1.461317 CGTACGTCCGCGATGAACAG 61.461 60.000 8.23 0.03 42.00 3.16
1690 1722 1.515519 TACGTCCGCGATGAACAGC 60.516 57.895 8.23 0.00 42.00 4.40
1691 1723 1.929806 TACGTCCGCGATGAACAGCT 61.930 55.000 8.23 0.00 42.00 4.24
1692 1724 2.094659 CGTCCGCGATGAACAGCTT 61.095 57.895 8.23 0.00 41.33 3.74
1693 1725 0.800683 CGTCCGCGATGAACAGCTTA 60.801 55.000 8.23 0.00 41.33 3.09
1694 1726 1.571919 GTCCGCGATGAACAGCTTAT 58.428 50.000 8.23 0.00 0.00 1.73
1695 1727 1.523095 GTCCGCGATGAACAGCTTATC 59.477 52.381 8.23 0.00 0.00 1.75
1696 1728 1.136110 TCCGCGATGAACAGCTTATCA 59.864 47.619 8.23 0.92 0.00 2.15
1697 1729 1.258982 CCGCGATGAACAGCTTATCAC 59.741 52.381 8.23 0.00 0.00 3.06
1698 1730 1.926510 CGCGATGAACAGCTTATCACA 59.073 47.619 0.00 0.00 0.00 3.58
1699 1731 2.034254 CGCGATGAACAGCTTATCACAG 60.034 50.000 0.00 0.38 0.00 3.66
1700 1732 2.932614 GCGATGAACAGCTTATCACAGT 59.067 45.455 0.43 0.00 0.00 3.55
1701 1733 3.372206 GCGATGAACAGCTTATCACAGTT 59.628 43.478 0.43 0.00 0.00 3.16
1702 1734 4.142816 GCGATGAACAGCTTATCACAGTTT 60.143 41.667 0.43 0.00 0.00 2.66
1703 1735 5.617751 GCGATGAACAGCTTATCACAGTTTT 60.618 40.000 0.43 0.00 0.00 2.43
1704 1736 6.402118 GCGATGAACAGCTTATCACAGTTTTA 60.402 38.462 0.43 0.00 0.00 1.52
1705 1737 7.677276 GCGATGAACAGCTTATCACAGTTTTAT 60.677 37.037 0.43 0.00 0.00 1.40
1706 1738 7.637519 CGATGAACAGCTTATCACAGTTTTATG 59.362 37.037 0.43 0.00 0.00 1.90
1707 1739 7.744087 TGAACAGCTTATCACAGTTTTATGT 57.256 32.000 0.00 0.00 0.00 2.29
1708 1740 8.165239 TGAACAGCTTATCACAGTTTTATGTT 57.835 30.769 0.00 0.00 0.00 2.71
1709 1741 8.629158 TGAACAGCTTATCACAGTTTTATGTTT 58.371 29.630 0.00 0.00 0.00 2.83
1710 1742 9.463443 GAACAGCTTATCACAGTTTTATGTTTT 57.537 29.630 0.00 0.00 0.00 2.43
1711 1743 8.801715 ACAGCTTATCACAGTTTTATGTTTTG 57.198 30.769 0.00 0.00 0.00 2.44
1712 1744 7.382218 ACAGCTTATCACAGTTTTATGTTTTGC 59.618 33.333 0.00 0.00 0.00 3.68
1713 1745 6.868339 AGCTTATCACAGTTTTATGTTTTGCC 59.132 34.615 0.00 0.00 0.00 4.52
1714 1746 6.183359 GCTTATCACAGTTTTATGTTTTGCCG 60.183 38.462 0.00 0.00 0.00 5.69
1715 1747 4.640789 TCACAGTTTTATGTTTTGCCGT 57.359 36.364 0.00 0.00 0.00 5.68
1716 1748 4.602995 TCACAGTTTTATGTTTTGCCGTC 58.397 39.130 0.00 0.00 0.00 4.79
1717 1749 4.336993 TCACAGTTTTATGTTTTGCCGTCT 59.663 37.500 0.00 0.00 0.00 4.18
1718 1750 5.040635 CACAGTTTTATGTTTTGCCGTCTT 58.959 37.500 0.00 0.00 0.00 3.01
1719 1751 5.040635 ACAGTTTTATGTTTTGCCGTCTTG 58.959 37.500 0.00 0.00 0.00 3.02
1720 1752 5.040635 CAGTTTTATGTTTTGCCGTCTTGT 58.959 37.500 0.00 0.00 0.00 3.16
1721 1753 5.040635 AGTTTTATGTTTTGCCGTCTTGTG 58.959 37.500 0.00 0.00 0.00 3.33
1722 1754 4.640789 TTTATGTTTTGCCGTCTTGTGT 57.359 36.364 0.00 0.00 0.00 3.72
1723 1755 4.640789 TTATGTTTTGCCGTCTTGTGTT 57.359 36.364 0.00 0.00 0.00 3.32
1724 1756 2.553079 TGTTTTGCCGTCTTGTGTTC 57.447 45.000 0.00 0.00 0.00 3.18
1725 1757 2.088423 TGTTTTGCCGTCTTGTGTTCT 58.912 42.857 0.00 0.00 0.00 3.01
1726 1758 2.096819 TGTTTTGCCGTCTTGTGTTCTC 59.903 45.455 0.00 0.00 0.00 2.87
1727 1759 2.325583 TTTGCCGTCTTGTGTTCTCT 57.674 45.000 0.00 0.00 0.00 3.10
1728 1760 1.865865 TTGCCGTCTTGTGTTCTCTC 58.134 50.000 0.00 0.00 0.00 3.20
1729 1761 0.033504 TGCCGTCTTGTGTTCTCTCC 59.966 55.000 0.00 0.00 0.00 3.71
1730 1762 0.033504 GCCGTCTTGTGTTCTCTCCA 59.966 55.000 0.00 0.00 0.00 3.86
1731 1763 1.338200 GCCGTCTTGTGTTCTCTCCAT 60.338 52.381 0.00 0.00 0.00 3.41
1732 1764 2.872038 GCCGTCTTGTGTTCTCTCCATT 60.872 50.000 0.00 0.00 0.00 3.16
1733 1765 2.738846 CCGTCTTGTGTTCTCTCCATTG 59.261 50.000 0.00 0.00 0.00 2.82
1734 1766 2.158449 CGTCTTGTGTTCTCTCCATTGC 59.842 50.000 0.00 0.00 0.00 3.56
1735 1767 2.485814 GTCTTGTGTTCTCTCCATTGCC 59.514 50.000 0.00 0.00 0.00 4.52
1736 1768 2.106338 TCTTGTGTTCTCTCCATTGCCA 59.894 45.455 0.00 0.00 0.00 4.92
1737 1769 1.896220 TGTGTTCTCTCCATTGCCAC 58.104 50.000 0.00 0.00 0.00 5.01
1738 1770 1.168714 GTGTTCTCTCCATTGCCACC 58.831 55.000 0.00 0.00 0.00 4.61
1739 1771 1.067295 TGTTCTCTCCATTGCCACCT 58.933 50.000 0.00 0.00 0.00 4.00
1740 1772 1.271543 TGTTCTCTCCATTGCCACCTG 60.272 52.381 0.00 0.00 0.00 4.00
1741 1773 1.003580 GTTCTCTCCATTGCCACCTGA 59.996 52.381 0.00 0.00 0.00 3.86
1742 1774 0.907486 TCTCTCCATTGCCACCTGAG 59.093 55.000 0.00 0.00 0.00 3.35
1743 1775 0.107312 CTCTCCATTGCCACCTGAGG 60.107 60.000 0.00 0.00 0.00 3.86
1744 1776 0.842030 TCTCCATTGCCACCTGAGGT 60.842 55.000 0.00 0.00 35.62 3.85
1745 1777 0.911769 CTCCATTGCCACCTGAGGTA 59.088 55.000 2.59 0.00 32.11 3.08
1746 1778 1.281867 CTCCATTGCCACCTGAGGTAA 59.718 52.381 2.59 0.00 37.66 2.85
1747 1779 1.281867 TCCATTGCCACCTGAGGTAAG 59.718 52.381 2.59 0.00 36.69 2.34
1748 1780 1.098050 CATTGCCACCTGAGGTAAGC 58.902 55.000 16.55 16.55 36.69 3.09
1749 1781 0.995024 ATTGCCACCTGAGGTAAGCT 59.005 50.000 21.87 4.94 36.69 3.74
1750 1782 1.651737 TTGCCACCTGAGGTAAGCTA 58.348 50.000 21.87 14.40 35.83 3.32
1751 1783 0.902531 TGCCACCTGAGGTAAGCTAC 59.097 55.000 21.87 3.33 35.83 3.58
1752 1784 0.179108 GCCACCTGAGGTAAGCTACG 60.179 60.000 16.22 0.00 32.11 3.51
1753 1785 0.179108 CCACCTGAGGTAAGCTACGC 60.179 60.000 2.59 0.00 32.11 4.42
1754 1786 0.530744 CACCTGAGGTAAGCTACGCA 59.469 55.000 2.59 0.00 32.11 5.24
1755 1787 0.531200 ACCTGAGGTAAGCTACGCAC 59.469 55.000 0.07 0.00 32.11 5.34
1756 1788 0.179108 CCTGAGGTAAGCTACGCACC 60.179 60.000 0.00 0.00 0.00 5.01
1757 1789 0.525668 CTGAGGTAAGCTACGCACCG 60.526 60.000 0.00 0.00 37.42 4.94
1758 1790 1.226888 GAGGTAAGCTACGCACCGG 60.227 63.158 0.00 0.00 37.42 5.28
1759 1791 1.941999 GAGGTAAGCTACGCACCGGT 61.942 60.000 0.00 0.00 37.42 5.28
1760 1792 1.517913 GGTAAGCTACGCACCGGTC 60.518 63.158 2.59 0.00 0.00 4.79
1761 1793 1.213537 GTAAGCTACGCACCGGTCA 59.786 57.895 2.59 0.00 0.00 4.02
1762 1794 0.388907 GTAAGCTACGCACCGGTCAA 60.389 55.000 2.59 0.00 0.00 3.18
1763 1795 0.388907 TAAGCTACGCACCGGTCAAC 60.389 55.000 2.59 0.00 0.00 3.18
1764 1796 3.475774 GCTACGCACCGGTCAACG 61.476 66.667 17.14 17.14 43.80 4.10
1765 1797 3.475774 CTACGCACCGGTCAACGC 61.476 66.667 18.31 12.14 42.52 4.84
1769 1801 4.025401 GCACCGGTCAACGCCTTG 62.025 66.667 2.59 0.00 42.52 3.61
1770 1802 2.280524 CACCGGTCAACGCCTTGA 60.281 61.111 2.59 0.00 42.52 3.02
1776 1808 2.502093 TCAACGCCTTGACCGTGT 59.498 55.556 0.00 0.00 39.13 4.49
1777 1809 1.885388 TCAACGCCTTGACCGTGTG 60.885 57.895 0.00 0.00 39.13 3.82
1778 1810 2.177580 CAACGCCTTGACCGTGTGT 61.178 57.895 0.00 0.00 39.13 3.72
1779 1811 0.876777 CAACGCCTTGACCGTGTGTA 60.877 55.000 0.00 0.00 39.13 2.90
1780 1812 0.599204 AACGCCTTGACCGTGTGTAG 60.599 55.000 0.00 0.00 39.13 2.74
1781 1813 1.006571 CGCCTTGACCGTGTGTAGT 60.007 57.895 0.00 0.00 0.00 2.73
1782 1814 0.241749 CGCCTTGACCGTGTGTAGTA 59.758 55.000 0.00 0.00 0.00 1.82
1783 1815 1.336148 CGCCTTGACCGTGTGTAGTAA 60.336 52.381 0.00 0.00 0.00 2.24
1784 1816 2.064014 GCCTTGACCGTGTGTAGTAAC 58.936 52.381 0.00 0.00 0.00 2.50
1785 1817 2.288640 GCCTTGACCGTGTGTAGTAACT 60.289 50.000 0.00 0.00 0.00 2.24
1786 1818 3.572584 CCTTGACCGTGTGTAGTAACTC 58.427 50.000 0.00 0.00 0.00 3.01
1787 1819 3.005050 CCTTGACCGTGTGTAGTAACTCA 59.995 47.826 0.00 0.00 0.00 3.41
1788 1820 3.631145 TGACCGTGTGTAGTAACTCAC 57.369 47.619 1.64 1.64 43.47 3.51
1789 1821 2.294233 TGACCGTGTGTAGTAACTCACC 59.706 50.000 5.45 0.00 43.83 4.02
1790 1822 2.555757 GACCGTGTGTAGTAACTCACCT 59.444 50.000 5.45 0.00 43.83 4.00
1791 1823 2.961062 ACCGTGTGTAGTAACTCACCTT 59.039 45.455 5.45 0.00 43.83 3.50
1792 1824 3.243636 ACCGTGTGTAGTAACTCACCTTG 60.244 47.826 5.45 0.00 43.83 3.61
1793 1825 3.314553 CGTGTGTAGTAACTCACCTTGG 58.685 50.000 5.45 0.00 43.83 3.61
1794 1826 3.064931 GTGTGTAGTAACTCACCTTGGC 58.935 50.000 0.45 0.00 41.91 4.52
1795 1827 2.701423 TGTGTAGTAACTCACCTTGGCA 59.299 45.455 0.00 0.00 34.14 4.92
1796 1828 3.244078 TGTGTAGTAACTCACCTTGGCAG 60.244 47.826 0.00 0.00 34.14 4.85
1797 1829 3.006537 GTGTAGTAACTCACCTTGGCAGA 59.993 47.826 0.00 0.00 0.00 4.26
1798 1830 3.838317 TGTAGTAACTCACCTTGGCAGAT 59.162 43.478 0.00 0.00 0.00 2.90
1799 1831 5.020795 TGTAGTAACTCACCTTGGCAGATA 58.979 41.667 0.00 0.00 0.00 1.98
1800 1832 5.661312 TGTAGTAACTCACCTTGGCAGATAT 59.339 40.000 0.00 0.00 0.00 1.63
1801 1833 5.283457 AGTAACTCACCTTGGCAGATATC 57.717 43.478 0.00 0.00 0.00 1.63
1802 1834 3.567478 AACTCACCTTGGCAGATATCC 57.433 47.619 0.00 0.00 0.00 2.59
1803 1835 2.481441 ACTCACCTTGGCAGATATCCA 58.519 47.619 0.00 0.00 0.00 3.41
1804 1836 2.171448 ACTCACCTTGGCAGATATCCAC 59.829 50.000 0.00 0.00 32.45 4.02
1805 1837 2.171237 CTCACCTTGGCAGATATCCACA 59.829 50.000 0.00 0.00 32.45 4.17
1806 1838 2.779430 TCACCTTGGCAGATATCCACAT 59.221 45.455 0.00 0.00 32.45 3.21
1807 1839 3.973305 TCACCTTGGCAGATATCCACATA 59.027 43.478 0.00 0.00 32.45 2.29
1808 1840 4.040829 TCACCTTGGCAGATATCCACATAG 59.959 45.833 0.00 0.00 32.45 2.23
1809 1841 3.976654 ACCTTGGCAGATATCCACATAGT 59.023 43.478 0.00 0.00 32.45 2.12
1810 1842 5.012046 CACCTTGGCAGATATCCACATAGTA 59.988 44.000 0.00 0.00 32.45 1.82
1811 1843 5.787494 ACCTTGGCAGATATCCACATAGTAT 59.213 40.000 0.00 0.00 32.45 2.12
1812 1844 6.959954 ACCTTGGCAGATATCCACATAGTATA 59.040 38.462 0.00 0.00 32.45 1.47
1813 1845 7.625280 ACCTTGGCAGATATCCACATAGTATAT 59.375 37.037 0.00 0.00 32.45 0.86
1814 1846 9.147732 CCTTGGCAGATATCCACATAGTATATA 57.852 37.037 0.00 0.00 32.45 0.86
1838 1870 9.693739 ATATATCTAGCTACATGTTAGTCAGCT 57.306 33.333 20.67 20.67 44.43 4.24
1840 1872 7.825331 ATCTAGCTACATGTTAGTCAGCTAA 57.175 36.000 21.71 15.24 42.53 3.09
1841 1873 7.640597 TCTAGCTACATGTTAGTCAGCTAAA 57.359 36.000 21.71 11.22 42.53 1.85
1842 1874 8.239038 TCTAGCTACATGTTAGTCAGCTAAAT 57.761 34.615 21.71 5.77 42.53 1.40
1843 1875 8.696374 TCTAGCTACATGTTAGTCAGCTAAATT 58.304 33.333 21.71 5.48 42.53 1.82
1844 1876 9.319143 CTAGCTACATGTTAGTCAGCTAAATTT 57.681 33.333 21.71 0.00 42.53 1.82
1845 1877 8.202745 AGCTACATGTTAGTCAGCTAAATTTC 57.797 34.615 16.61 0.00 40.67 2.17
1846 1878 7.010552 AGCTACATGTTAGTCAGCTAAATTTCG 59.989 37.037 16.61 0.00 40.67 3.46
1847 1879 7.010183 GCTACATGTTAGTCAGCTAAATTTCGA 59.990 37.037 2.30 0.00 38.74 3.71
1848 1880 7.667043 ACATGTTAGTCAGCTAAATTTCGAA 57.333 32.000 0.00 0.00 38.74 3.71
1849 1881 8.268850 ACATGTTAGTCAGCTAAATTTCGAAT 57.731 30.769 0.00 0.00 38.74 3.34
1850 1882 8.730680 ACATGTTAGTCAGCTAAATTTCGAATT 58.269 29.630 0.00 0.00 38.74 2.17
1851 1883 9.214953 CATGTTAGTCAGCTAAATTTCGAATTC 57.785 33.333 0.00 0.00 38.74 2.17
1852 1884 7.453034 TGTTAGTCAGCTAAATTTCGAATTCG 58.547 34.615 21.78 21.78 38.74 3.34
1853 1885 5.470845 AGTCAGCTAAATTTCGAATTCGG 57.529 39.130 26.47 10.46 40.29 4.30
1854 1886 5.175859 AGTCAGCTAAATTTCGAATTCGGA 58.824 37.500 26.47 17.04 40.29 4.55
1855 1887 5.817816 AGTCAGCTAAATTTCGAATTCGGAT 59.182 36.000 26.47 17.66 40.29 4.18
1856 1888 6.018669 AGTCAGCTAAATTTCGAATTCGGATC 60.019 38.462 26.47 9.80 40.29 3.36
1857 1889 5.236478 TCAGCTAAATTTCGAATTCGGATCC 59.764 40.000 26.47 0.00 40.29 3.36
1858 1890 4.211374 AGCTAAATTTCGAATTCGGATCCG 59.789 41.667 28.62 28.62 40.29 4.18
1859 1891 4.025145 GCTAAATTTCGAATTCGGATCCGT 60.025 41.667 32.15 15.04 40.74 4.69
1860 1892 4.531659 AAATTTCGAATTCGGATCCGTC 57.468 40.909 32.15 21.58 40.74 4.79
1861 1893 2.658373 TTTCGAATTCGGATCCGTCA 57.342 45.000 32.15 20.92 40.74 4.35
1862 1894 2.658373 TTCGAATTCGGATCCGTCAA 57.342 45.000 32.15 21.15 40.74 3.18
1863 1895 2.882927 TCGAATTCGGATCCGTCAAT 57.117 45.000 32.15 22.40 40.74 2.57
1864 1896 3.173668 TCGAATTCGGATCCGTCAATT 57.826 42.857 32.15 28.41 40.74 2.32
1865 1897 3.527533 TCGAATTCGGATCCGTCAATTT 58.472 40.909 32.15 18.82 40.74 1.82
1866 1898 3.308595 TCGAATTCGGATCCGTCAATTTG 59.691 43.478 32.15 29.29 40.74 2.32
1867 1899 3.308595 CGAATTCGGATCCGTCAATTTGA 59.691 43.478 28.54 11.90 40.74 2.69
1868 1900 4.201773 CGAATTCGGATCCGTCAATTTGAA 60.202 41.667 28.54 18.38 40.74 2.69
1869 1901 5.504010 CGAATTCGGATCCGTCAATTTGAAT 60.504 40.000 28.54 19.48 40.74 2.57
1870 1902 4.614555 TTCGGATCCGTCAATTTGAATG 57.385 40.909 32.15 0.87 40.74 2.67
1871 1903 3.867857 TCGGATCCGTCAATTTGAATGA 58.132 40.909 32.15 6.64 40.74 2.57
1872 1904 4.257731 TCGGATCCGTCAATTTGAATGAA 58.742 39.130 32.15 6.17 40.74 2.57
1873 1905 4.332543 TCGGATCCGTCAATTTGAATGAAG 59.667 41.667 32.15 0.00 40.74 3.02
1874 1906 4.496341 CGGATCCGTCAATTTGAATGAAGG 60.496 45.833 26.35 2.62 44.65 3.46
1877 1909 4.905429 TCCGTCAATTTGAATGAAGGAGA 58.095 39.130 7.03 0.00 46.14 3.71
1878 1910 5.312895 TCCGTCAATTTGAATGAAGGAGAA 58.687 37.500 7.03 0.00 46.14 2.87
1879 1911 5.412594 TCCGTCAATTTGAATGAAGGAGAAG 59.587 40.000 7.03 0.00 46.14 2.85
1880 1912 5.392380 CCGTCAATTTGAATGAAGGAGAAGG 60.392 44.000 0.00 0.00 45.70 3.46
1881 1913 5.412594 CGTCAATTTGAATGAAGGAGAAGGA 59.587 40.000 0.00 0.00 0.00 3.36
1882 1914 6.072508 CGTCAATTTGAATGAAGGAGAAGGAA 60.073 38.462 0.00 0.00 0.00 3.36
1883 1915 7.311408 GTCAATTTGAATGAAGGAGAAGGAAG 58.689 38.462 0.00 0.00 0.00 3.46
1884 1916 7.175641 GTCAATTTGAATGAAGGAGAAGGAAGA 59.824 37.037 0.00 0.00 0.00 2.87
1885 1917 7.892241 TCAATTTGAATGAAGGAGAAGGAAGAT 59.108 33.333 0.00 0.00 0.00 2.40
1886 1918 7.878547 ATTTGAATGAAGGAGAAGGAAGATC 57.121 36.000 0.00 0.00 0.00 2.75
1887 1919 5.016051 TGAATGAAGGAGAAGGAAGATCG 57.984 43.478 0.00 0.00 0.00 3.69
1888 1920 4.467795 TGAATGAAGGAGAAGGAAGATCGT 59.532 41.667 0.00 0.00 0.00 3.73
1889 1921 4.664150 ATGAAGGAGAAGGAAGATCGTC 57.336 45.455 0.00 0.00 0.00 4.20
1890 1922 3.431415 TGAAGGAGAAGGAAGATCGTCA 58.569 45.455 10.88 0.00 0.00 4.35
1891 1923 3.193691 TGAAGGAGAAGGAAGATCGTCAC 59.806 47.826 10.88 0.55 0.00 3.67
1892 1924 2.104170 AGGAGAAGGAAGATCGTCACC 58.896 52.381 10.88 5.70 0.00 4.02
1893 1925 1.137282 GGAGAAGGAAGATCGTCACCC 59.863 57.143 10.88 0.64 0.00 4.61
1894 1926 1.137282 GAGAAGGAAGATCGTCACCCC 59.863 57.143 10.88 0.00 0.00 4.95
1895 1927 0.902531 GAAGGAAGATCGTCACCCCA 59.097 55.000 10.88 0.00 0.00 4.96
1896 1928 1.486726 GAAGGAAGATCGTCACCCCAT 59.513 52.381 10.88 0.00 0.00 4.00
1897 1929 1.584724 AGGAAGATCGTCACCCCATT 58.415 50.000 10.88 0.00 0.00 3.16
1898 1930 1.916181 AGGAAGATCGTCACCCCATTT 59.084 47.619 10.88 0.00 0.00 2.32
1899 1931 3.112263 AGGAAGATCGTCACCCCATTTA 58.888 45.455 10.88 0.00 0.00 1.40
1900 1932 3.716872 AGGAAGATCGTCACCCCATTTAT 59.283 43.478 10.88 0.00 0.00 1.40
1901 1933 4.065789 GGAAGATCGTCACCCCATTTATC 58.934 47.826 10.88 0.00 0.00 1.75
1902 1934 4.202367 GGAAGATCGTCACCCCATTTATCT 60.202 45.833 10.88 0.00 0.00 1.98
1903 1935 5.011738 GGAAGATCGTCACCCCATTTATCTA 59.988 44.000 10.88 0.00 0.00 1.98
1904 1936 6.295916 GGAAGATCGTCACCCCATTTATCTAT 60.296 42.308 10.88 0.00 0.00 1.98
1905 1937 6.287589 AGATCGTCACCCCATTTATCTATC 57.712 41.667 0.00 0.00 0.00 2.08
1906 1938 5.780282 AGATCGTCACCCCATTTATCTATCA 59.220 40.000 0.00 0.00 0.00 2.15
1907 1939 6.441924 AGATCGTCACCCCATTTATCTATCAT 59.558 38.462 0.00 0.00 0.00 2.45
1908 1940 7.619698 AGATCGTCACCCCATTTATCTATCATA 59.380 37.037 0.00 0.00 0.00 2.15
1909 1941 7.170393 TCGTCACCCCATTTATCTATCATAG 57.830 40.000 0.00 0.00 0.00 2.23
1910 1942 6.951778 TCGTCACCCCATTTATCTATCATAGA 59.048 38.462 0.00 0.00 39.50 1.98
1911 1943 7.122799 TCGTCACCCCATTTATCTATCATAGAG 59.877 40.741 0.00 0.00 38.38 2.43
1912 1944 7.093727 CGTCACCCCATTTATCTATCATAGAGT 60.094 40.741 0.00 0.00 38.38 3.24
1913 1945 8.598041 GTCACCCCATTTATCTATCATAGAGTT 58.402 37.037 0.00 0.00 38.38 3.01
1914 1946 9.170890 TCACCCCATTTATCTATCATAGAGTTT 57.829 33.333 0.00 0.00 38.38 2.66
2472 2504 2.498726 GGCAAGCGAGAGAGAGGG 59.501 66.667 0.00 0.00 0.00 4.30
2473 2505 2.498726 GCAAGCGAGAGAGAGGGG 59.501 66.667 0.00 0.00 0.00 4.79
2474 2506 2.055042 GCAAGCGAGAGAGAGGGGA 61.055 63.158 0.00 0.00 0.00 4.81
2475 2507 1.608717 GCAAGCGAGAGAGAGGGGAA 61.609 60.000 0.00 0.00 0.00 3.97
2476 2508 0.459489 CAAGCGAGAGAGAGGGGAAG 59.541 60.000 0.00 0.00 0.00 3.46
2477 2509 0.333312 AAGCGAGAGAGAGGGGAAGA 59.667 55.000 0.00 0.00 0.00 2.87
2478 2510 0.333312 AGCGAGAGAGAGGGGAAGAA 59.667 55.000 0.00 0.00 0.00 2.52
2479 2511 0.744281 GCGAGAGAGAGGGGAAGAAG 59.256 60.000 0.00 0.00 0.00 2.85
2480 2512 1.683629 GCGAGAGAGAGGGGAAGAAGA 60.684 57.143 0.00 0.00 0.00 2.87
2481 2513 2.944129 CGAGAGAGAGGGGAAGAAGAT 58.056 52.381 0.00 0.00 0.00 2.40
2482 2514 3.749310 GCGAGAGAGAGGGGAAGAAGATA 60.749 52.174 0.00 0.00 0.00 1.98
2483 2515 4.465886 CGAGAGAGAGGGGAAGAAGATAA 58.534 47.826 0.00 0.00 0.00 1.75
2484 2516 4.890581 CGAGAGAGAGGGGAAGAAGATAAA 59.109 45.833 0.00 0.00 0.00 1.40
2485 2517 5.221165 CGAGAGAGAGGGGAAGAAGATAAAC 60.221 48.000 0.00 0.00 0.00 2.01
2486 2518 4.966168 AGAGAGAGGGGAAGAAGATAAACC 59.034 45.833 0.00 0.00 0.00 3.27
2487 2519 3.707102 AGAGAGGGGAAGAAGATAAACCG 59.293 47.826 0.00 0.00 0.00 4.44
2488 2520 3.451540 GAGAGGGGAAGAAGATAAACCGT 59.548 47.826 0.00 0.00 0.00 4.83
2489 2521 3.844804 AGAGGGGAAGAAGATAAACCGTT 59.155 43.478 0.00 0.00 0.00 4.44
2490 2522 3.939592 GAGGGGAAGAAGATAAACCGTTG 59.060 47.826 0.00 0.00 0.00 4.10
2491 2523 3.014623 GGGGAAGAAGATAAACCGTTGG 58.985 50.000 0.00 0.00 0.00 3.77
2492 2524 3.307904 GGGGAAGAAGATAAACCGTTGGA 60.308 47.826 0.00 0.00 0.00 3.53
2493 2525 4.524053 GGGAAGAAGATAAACCGTTGGAT 58.476 43.478 0.00 0.00 0.00 3.41
2494 2526 4.575236 GGGAAGAAGATAAACCGTTGGATC 59.425 45.833 0.00 0.00 0.00 3.36
2495 2527 5.429130 GGAAGAAGATAAACCGTTGGATCT 58.571 41.667 0.00 3.96 0.00 2.75
2496 2528 5.880887 GGAAGAAGATAAACCGTTGGATCTT 59.119 40.000 16.29 16.29 40.49 2.40
2497 2529 6.183360 GGAAGAAGATAAACCGTTGGATCTTG 60.183 42.308 19.33 0.00 38.46 3.02
2498 2530 6.049955 AGAAGATAAACCGTTGGATCTTGA 57.950 37.500 19.33 0.00 38.46 3.02
2499 2531 6.653989 AGAAGATAAACCGTTGGATCTTGAT 58.346 36.000 19.33 9.95 38.46 2.57
2500 2532 6.763610 AGAAGATAAACCGTTGGATCTTGATC 59.236 38.462 19.33 10.28 38.46 2.92
2501 2533 5.050490 AGATAAACCGTTGGATCTTGATCG 58.950 41.667 4.75 0.00 0.00 3.69
2502 2534 3.328382 AAACCGTTGGATCTTGATCGA 57.672 42.857 4.75 0.00 0.00 3.59
2503 2535 3.328382 AACCGTTGGATCTTGATCGAA 57.672 42.857 4.36 4.36 0.00 3.71
2504 2536 2.618053 ACCGTTGGATCTTGATCGAAC 58.382 47.619 20.84 20.84 36.39 3.95
2505 2537 2.028476 ACCGTTGGATCTTGATCGAACA 60.028 45.455 26.15 10.14 38.60 3.18
2506 2538 2.604914 CCGTTGGATCTTGATCGAACAG 59.395 50.000 26.15 20.51 38.60 3.16
2507 2539 3.254060 CGTTGGATCTTGATCGAACAGT 58.746 45.455 26.15 0.00 38.60 3.55
2508 2540 3.679980 CGTTGGATCTTGATCGAACAGTT 59.320 43.478 26.15 0.00 38.60 3.16
2509 2541 4.434725 CGTTGGATCTTGATCGAACAGTTG 60.435 45.833 26.15 13.74 38.60 3.16
2510 2542 4.535526 TGGATCTTGATCGAACAGTTGA 57.464 40.909 0.00 0.00 0.00 3.18
2511 2543 5.089970 TGGATCTTGATCGAACAGTTGAT 57.910 39.130 0.00 2.10 0.00 2.57
2512 2544 6.220726 TGGATCTTGATCGAACAGTTGATA 57.779 37.500 0.00 0.00 0.00 2.15
2513 2545 6.042777 TGGATCTTGATCGAACAGTTGATAC 58.957 40.000 0.00 3.64 0.00 2.24
2514 2546 6.042777 GGATCTTGATCGAACAGTTGATACA 58.957 40.000 10.49 0.00 0.00 2.29
2515 2547 6.199908 GGATCTTGATCGAACAGTTGATACAG 59.800 42.308 10.49 0.00 0.00 2.74
2516 2548 5.410924 TCTTGATCGAACAGTTGATACAGG 58.589 41.667 0.00 0.00 0.00 4.00
2517 2549 5.185056 TCTTGATCGAACAGTTGATACAGGA 59.815 40.000 0.00 0.09 0.00 3.86
2518 2550 5.400066 TGATCGAACAGTTGATACAGGAA 57.600 39.130 0.00 0.00 0.00 3.36
2519 2551 5.789521 TGATCGAACAGTTGATACAGGAAA 58.210 37.500 0.00 0.00 0.00 3.13
2520 2552 6.227522 TGATCGAACAGTTGATACAGGAAAA 58.772 36.000 0.00 0.00 0.00 2.29
2521 2553 6.368791 TGATCGAACAGTTGATACAGGAAAAG 59.631 38.462 0.00 0.00 0.00 2.27
2522 2554 4.994852 TCGAACAGTTGATACAGGAAAAGG 59.005 41.667 0.00 0.00 0.00 3.11
2523 2555 4.994852 CGAACAGTTGATACAGGAAAAGGA 59.005 41.667 0.00 0.00 0.00 3.36
2524 2556 5.120830 CGAACAGTTGATACAGGAAAAGGAG 59.879 44.000 0.00 0.00 0.00 3.69
2525 2557 5.825593 ACAGTTGATACAGGAAAAGGAGA 57.174 39.130 0.00 0.00 0.00 3.71
2526 2558 6.187727 ACAGTTGATACAGGAAAAGGAGAA 57.812 37.500 0.00 0.00 0.00 2.87
2527 2559 6.784031 ACAGTTGATACAGGAAAAGGAGAAT 58.216 36.000 0.00 0.00 0.00 2.40
2528 2560 6.881602 ACAGTTGATACAGGAAAAGGAGAATC 59.118 38.462 0.00 0.00 0.00 2.52
2529 2561 6.036517 CAGTTGATACAGGAAAAGGAGAATCG 59.963 42.308 0.00 0.00 34.37 3.34
2530 2562 5.932619 TGATACAGGAAAAGGAGAATCGA 57.067 39.130 0.00 0.00 34.37 3.59
2531 2563 5.661458 TGATACAGGAAAAGGAGAATCGAC 58.339 41.667 0.00 0.00 34.37 4.20
2532 2564 5.422331 TGATACAGGAAAAGGAGAATCGACT 59.578 40.000 0.00 0.00 34.37 4.18
2533 2565 3.931578 ACAGGAAAAGGAGAATCGACTG 58.068 45.455 0.00 0.00 34.37 3.51
2534 2566 3.265791 CAGGAAAAGGAGAATCGACTGG 58.734 50.000 0.00 0.00 34.37 4.00
2535 2567 2.907042 AGGAAAAGGAGAATCGACTGGT 59.093 45.455 0.00 0.00 34.37 4.00
2536 2568 3.055747 AGGAAAAGGAGAATCGACTGGTC 60.056 47.826 0.00 0.00 34.37 4.02
2566 2598 3.762407 TTTTCAGTCGATTGACCTGGA 57.238 42.857 10.49 2.82 46.74 3.86
2567 2599 3.762407 TTTCAGTCGATTGACCTGGAA 57.238 42.857 10.49 8.58 46.74 3.53
2568 2600 2.743636 TCAGTCGATTGACCTGGAAC 57.256 50.000 6.51 0.00 46.74 3.62
2569 2601 1.275291 TCAGTCGATTGACCTGGAACC 59.725 52.381 6.51 0.00 46.74 3.62
2570 2602 0.246635 AGTCGATTGACCTGGAACCG 59.753 55.000 9.62 0.00 46.74 4.44
2571 2603 0.739813 GTCGATTGACCTGGAACCGG 60.740 60.000 0.00 0.00 39.30 5.28
2572 2604 1.189524 TCGATTGACCTGGAACCGGT 61.190 55.000 0.00 0.00 37.50 5.28
2581 2613 3.316029 GGAACCGGTCCCTATGCA 58.684 61.111 8.04 0.00 41.10 3.96
2582 2614 1.837090 GGAACCGGTCCCTATGCAT 59.163 57.895 8.04 3.79 41.10 3.96
2583 2615 0.182775 GGAACCGGTCCCTATGCATT 59.817 55.000 8.04 0.00 41.10 3.56
2584 2616 1.418637 GGAACCGGTCCCTATGCATTA 59.581 52.381 8.04 0.00 41.10 1.90
2585 2617 2.490991 GAACCGGTCCCTATGCATTAC 58.509 52.381 8.04 0.00 0.00 1.89
2586 2618 0.763035 ACCGGTCCCTATGCATTACC 59.237 55.000 3.54 7.30 0.00 2.85
2587 2619 0.036306 CCGGTCCCTATGCATTACCC 59.964 60.000 3.54 0.00 0.00 3.69
2588 2620 0.762418 CGGTCCCTATGCATTACCCA 59.238 55.000 3.54 0.00 0.00 4.51
2589 2621 1.351017 CGGTCCCTATGCATTACCCAT 59.649 52.381 3.54 0.00 0.00 4.00
2590 2622 2.795329 GGTCCCTATGCATTACCCATG 58.205 52.381 3.54 0.00 35.73 3.66
2591 2623 2.375174 GGTCCCTATGCATTACCCATGA 59.625 50.000 3.54 0.00 34.31 3.07
2592 2624 3.181434 GGTCCCTATGCATTACCCATGAA 60.181 47.826 3.54 0.00 34.31 2.57
2593 2625 4.469657 GTCCCTATGCATTACCCATGAAA 58.530 43.478 3.54 0.00 34.31 2.69
2594 2626 4.892934 GTCCCTATGCATTACCCATGAAAA 59.107 41.667 3.54 0.00 34.31 2.29
2595 2627 5.362430 GTCCCTATGCATTACCCATGAAAAA 59.638 40.000 3.54 0.00 34.31 1.94
2596 2628 5.598005 TCCCTATGCATTACCCATGAAAAAG 59.402 40.000 3.54 0.00 34.31 2.27
2597 2629 5.363580 CCCTATGCATTACCCATGAAAAAGT 59.636 40.000 3.54 0.00 34.31 2.66
2598 2630 6.275335 CCTATGCATTACCCATGAAAAAGTG 58.725 40.000 3.54 0.00 34.31 3.16
2599 2631 3.924144 TGCATTACCCATGAAAAAGTGC 58.076 40.909 0.00 0.00 34.31 4.40
2600 2632 2.923020 GCATTACCCATGAAAAAGTGCG 59.077 45.455 0.00 0.00 34.31 5.34
2601 2633 3.613910 GCATTACCCATGAAAAAGTGCGT 60.614 43.478 0.00 0.00 34.31 5.24
2602 2634 4.555262 CATTACCCATGAAAAAGTGCGTT 58.445 39.130 0.00 0.00 34.31 4.84
2603 2635 5.704888 CATTACCCATGAAAAAGTGCGTTA 58.295 37.500 0.00 0.00 34.31 3.18
2604 2636 5.968528 TTACCCATGAAAAAGTGCGTTAT 57.031 34.783 0.00 0.00 0.00 1.89
2605 2637 4.434713 ACCCATGAAAAAGTGCGTTATC 57.565 40.909 0.00 0.00 0.00 1.75
2606 2638 4.079253 ACCCATGAAAAAGTGCGTTATCT 58.921 39.130 0.00 0.00 0.00 1.98
2607 2639 4.082787 ACCCATGAAAAAGTGCGTTATCTG 60.083 41.667 0.00 0.00 0.00 2.90
2608 2640 4.155826 CCCATGAAAAAGTGCGTTATCTGA 59.844 41.667 0.00 0.00 0.00 3.27
2609 2641 5.163622 CCCATGAAAAAGTGCGTTATCTGAT 60.164 40.000 0.00 0.00 0.00 2.90
2610 2642 6.038161 CCCATGAAAAAGTGCGTTATCTGATA 59.962 38.462 0.00 0.00 0.00 2.15
2611 2643 7.415095 CCCATGAAAAAGTGCGTTATCTGATAA 60.415 37.037 6.01 6.01 0.00 1.75
2612 2644 8.131100 CCATGAAAAAGTGCGTTATCTGATAAT 58.869 33.333 12.84 0.00 0.00 1.28
2613 2645 8.950961 CATGAAAAAGTGCGTTATCTGATAATG 58.049 33.333 20.32 20.32 35.37 1.90
2614 2646 8.039603 TGAAAAAGTGCGTTATCTGATAATGT 57.960 30.769 23.52 8.31 34.87 2.71
2615 2647 9.157104 TGAAAAAGTGCGTTATCTGATAATGTA 57.843 29.630 23.52 19.06 34.87 2.29
2616 2648 9.638300 GAAAAAGTGCGTTATCTGATAATGTAG 57.362 33.333 23.52 12.95 34.87 2.74
2617 2649 8.942338 AAAAGTGCGTTATCTGATAATGTAGA 57.058 30.769 23.52 10.80 34.87 2.59
2618 2650 9.547753 AAAAGTGCGTTATCTGATAATGTAGAT 57.452 29.630 23.52 12.65 37.42 1.98
2619 2651 8.526218 AAGTGCGTTATCTGATAATGTAGATG 57.474 34.615 23.52 5.81 35.42 2.90
2620 2652 7.661968 AGTGCGTTATCTGATAATGTAGATGT 58.338 34.615 23.52 8.05 35.42 3.06
2621 2653 8.793592 AGTGCGTTATCTGATAATGTAGATGTA 58.206 33.333 23.52 2.31 35.42 2.29
2622 2654 9.406828 GTGCGTTATCTGATAATGTAGATGTAA 57.593 33.333 23.52 4.82 35.42 2.41
2623 2655 9.974980 TGCGTTATCTGATAATGTAGATGTAAA 57.025 29.630 23.52 0.00 35.42 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.056125 CTGCACCTCGCGACTGGA 62.056 66.667 20.15 11.56 46.97 3.86
12 13 0.464373 ATTGGCCATACTGCACCTCG 60.464 55.000 6.09 0.00 0.00 4.63
17 18 2.025416 ACAACCTATTGGCCATACTGCA 60.025 45.455 6.09 0.00 40.42 4.41
81 83 2.602660 GCAACGACAATGTTTTTGCTGT 59.397 40.909 19.37 0.00 39.57 4.40
100 104 2.062361 CTTTGCGCCTTGTGACAGCA 62.062 55.000 4.18 0.00 35.90 4.41
112 116 1.226746 ACTAACTGACCACTTTGCGC 58.773 50.000 0.00 0.00 0.00 6.09
230 236 3.181458 GCTATCACCGGTGAGGGATTTTA 60.181 47.826 37.98 23.64 46.96 1.52
248 254 3.950395 GCAAGGTCCTCAGATTTTGCTAT 59.050 43.478 0.00 0.00 39.33 2.97
291 299 0.109226 GACGAAGCTGCGACCTACTT 60.109 55.000 24.02 0.00 34.83 2.24
309 317 4.122046 CAGATTTGCTACATCCATCACGA 58.878 43.478 0.00 0.00 0.00 4.35
439 448 1.867233 CGGCATTACATCCTGCTACAC 59.133 52.381 0.00 0.00 38.45 2.90
493 502 0.036765 AAAGCTACAACCGGCATCGA 60.037 50.000 0.00 0.00 39.00 3.59
560 571 4.685169 AGAAGGCATACATTTGTCAACG 57.315 40.909 0.00 0.00 0.00 4.10
569 580 2.648059 GTGCTCCAAGAAGGCATACAT 58.352 47.619 0.00 0.00 38.27 2.29
591 602 2.161012 CGACGTACCTACTCTGCAAGAA 59.839 50.000 0.00 0.00 46.34 2.52
594 605 0.806868 CCGACGTACCTACTCTGCAA 59.193 55.000 0.00 0.00 0.00 4.08
600 611 2.045926 ACCGCCGACGTACCTACT 60.046 61.111 0.00 0.00 37.70 2.57
602 613 3.195002 CGACCGCCGACGTACCTA 61.195 66.667 0.00 0.00 41.76 3.08
682 693 7.226441 TCATCTTCTTTCATCTCCTCAAACAA 58.774 34.615 0.00 0.00 0.00 2.83
691 702 8.167985 CGTCTTTTCTTCATCTTCTTTCATCTC 58.832 37.037 0.00 0.00 0.00 2.75
705 716 2.813754 CCCTTGCATCGTCTTTTCTTCA 59.186 45.455 0.00 0.00 0.00 3.02
844 859 7.756395 GGAACGATCCTATATATATTCCGGA 57.244 40.000 0.00 0.00 42.93 5.14
880 899 4.258543 CCGGTGTTTCTTTTATAGAGCCA 58.741 43.478 0.00 0.00 33.51 4.75
911 930 3.791586 GTGGAGGAGGAGCAGCCC 61.792 72.222 0.00 0.00 37.37 5.19
924 943 1.480683 CCCTATAGAGCCCGAAGTGGA 60.481 57.143 0.00 0.00 42.00 4.02
930 949 0.858369 AGGAACCCTATAGAGCCCGA 59.142 55.000 0.00 0.00 28.47 5.14
932 951 2.369203 GTTGAGGAACCCTATAGAGCCC 59.631 54.545 0.00 0.00 31.76 5.19
953 972 1.819632 CGCGAGATTTTGGGGAGGG 60.820 63.158 0.00 0.00 0.00 4.30
1157 1187 0.869454 TTTCCTTTTGCTGTTGCGCG 60.869 50.000 0.00 0.00 43.34 6.86
1233 1263 2.124942 GCCAGCTTCTTCCCGGAG 60.125 66.667 0.73 0.00 0.00 4.63
1407 1439 3.781770 CTGGGTCTCGATCTGCGCC 62.782 68.421 4.18 0.00 40.61 6.53
1483 1515 2.321263 TACTCCTCGGCGACCTCGAT 62.321 60.000 4.99 0.00 43.02 3.59
1637 1669 4.941263 TGCGCAAAGACAGGTAGATAAAAT 59.059 37.500 8.16 0.00 0.00 1.82
1638 1670 4.320023 TGCGCAAAGACAGGTAGATAAAA 58.680 39.130 8.16 0.00 0.00 1.52
1639 1671 3.932822 TGCGCAAAGACAGGTAGATAAA 58.067 40.909 8.16 0.00 0.00 1.40
1640 1672 3.603158 TGCGCAAAGACAGGTAGATAA 57.397 42.857 8.16 0.00 0.00 1.75
1641 1673 3.384789 AGATGCGCAAAGACAGGTAGATA 59.615 43.478 17.11 0.00 0.00 1.98
1642 1674 2.169352 AGATGCGCAAAGACAGGTAGAT 59.831 45.455 17.11 0.00 0.00 1.98
1643 1675 1.550524 AGATGCGCAAAGACAGGTAGA 59.449 47.619 17.11 0.00 0.00 2.59
1644 1676 2.015736 AGATGCGCAAAGACAGGTAG 57.984 50.000 17.11 0.00 0.00 3.18
1645 1677 3.717707 GATAGATGCGCAAAGACAGGTA 58.282 45.455 17.11 0.00 0.00 3.08
1646 1678 2.555199 GATAGATGCGCAAAGACAGGT 58.445 47.619 17.11 0.00 0.00 4.00
1647 1679 1.524355 CGATAGATGCGCAAAGACAGG 59.476 52.381 17.11 0.00 39.76 4.00
1648 1680 1.524355 CCGATAGATGCGCAAAGACAG 59.476 52.381 17.11 5.13 39.76 3.51
1649 1681 1.134818 ACCGATAGATGCGCAAAGACA 60.135 47.619 17.11 0.00 39.76 3.41
1650 1682 1.523095 GACCGATAGATGCGCAAAGAC 59.477 52.381 17.11 6.67 39.76 3.01
1651 1683 1.852942 GACCGATAGATGCGCAAAGA 58.147 50.000 17.11 1.75 39.76 2.52
1652 1684 0.504384 CGACCGATAGATGCGCAAAG 59.496 55.000 17.11 1.93 39.76 2.77
1653 1685 0.179121 ACGACCGATAGATGCGCAAA 60.179 50.000 17.11 2.95 39.76 3.68
1654 1686 0.664224 TACGACCGATAGATGCGCAA 59.336 50.000 17.11 0.00 39.76 4.85
1655 1687 0.040692 GTACGACCGATAGATGCGCA 60.041 55.000 14.96 14.96 39.76 6.09
1656 1688 1.058590 CGTACGACCGATAGATGCGC 61.059 60.000 10.44 0.00 39.76 6.09
1657 1689 0.234106 ACGTACGACCGATAGATGCG 59.766 55.000 24.41 0.00 39.76 4.73
1658 1690 1.399471 GGACGTACGACCGATAGATGC 60.399 57.143 24.41 0.00 39.76 3.91
1659 1691 2.591066 GGACGTACGACCGATAGATG 57.409 55.000 24.41 0.00 39.76 2.90
1667 1699 2.582202 TTCATCGCGGACGTACGACC 62.582 60.000 27.46 24.23 41.76 4.79
1668 1700 1.226101 TTCATCGCGGACGTACGAC 60.226 57.895 27.46 16.49 41.76 4.34
1669 1701 1.226101 GTTCATCGCGGACGTACGA 60.226 57.895 27.46 17.32 43.33 3.43
1670 1702 1.461317 CTGTTCATCGCGGACGTACG 61.461 60.000 17.86 17.86 41.18 3.67
1671 1703 1.740043 GCTGTTCATCGCGGACGTAC 61.740 60.000 6.13 0.00 41.18 3.67
1672 1704 1.515519 GCTGTTCATCGCGGACGTA 60.516 57.895 6.13 0.00 41.18 3.57
1673 1705 2.765250 AAGCTGTTCATCGCGGACGT 62.765 55.000 6.13 0.00 41.18 4.34
1674 1706 0.800683 TAAGCTGTTCATCGCGGACG 60.801 55.000 6.13 0.00 42.01 4.79
1675 1707 1.523095 GATAAGCTGTTCATCGCGGAC 59.477 52.381 6.13 0.78 0.00 4.79
1676 1708 1.136110 TGATAAGCTGTTCATCGCGGA 59.864 47.619 6.13 0.00 0.00 5.54
1677 1709 1.258982 GTGATAAGCTGTTCATCGCGG 59.741 52.381 6.13 0.00 0.00 6.46
1678 1710 1.926510 TGTGATAAGCTGTTCATCGCG 59.073 47.619 0.00 0.00 32.98 5.87
1679 1711 2.932614 ACTGTGATAAGCTGTTCATCGC 59.067 45.455 2.49 3.96 0.00 4.58
1680 1712 5.536554 AAACTGTGATAAGCTGTTCATCG 57.463 39.130 2.49 0.79 0.00 3.84
1681 1713 8.454106 ACATAAAACTGTGATAAGCTGTTCATC 58.546 33.333 2.49 0.00 0.00 2.92
1682 1714 8.340618 ACATAAAACTGTGATAAGCTGTTCAT 57.659 30.769 2.49 0.00 0.00 2.57
1683 1715 7.744087 ACATAAAACTGTGATAAGCTGTTCA 57.256 32.000 0.00 0.00 0.00 3.18
1684 1716 9.463443 AAAACATAAAACTGTGATAAGCTGTTC 57.537 29.630 0.00 0.00 0.00 3.18
1685 1717 9.248291 CAAAACATAAAACTGTGATAAGCTGTT 57.752 29.630 0.00 0.00 0.00 3.16
1686 1718 7.382218 GCAAAACATAAAACTGTGATAAGCTGT 59.618 33.333 0.00 0.00 0.00 4.40
1687 1719 7.148755 GGCAAAACATAAAACTGTGATAAGCTG 60.149 37.037 0.00 0.00 0.00 4.24
1688 1720 6.868339 GGCAAAACATAAAACTGTGATAAGCT 59.132 34.615 0.00 0.00 0.00 3.74
1689 1721 6.183359 CGGCAAAACATAAAACTGTGATAAGC 60.183 38.462 0.00 0.00 0.00 3.09
1690 1722 6.861055 ACGGCAAAACATAAAACTGTGATAAG 59.139 34.615 0.00 0.00 0.00 1.73
1691 1723 6.740110 ACGGCAAAACATAAAACTGTGATAA 58.260 32.000 0.00 0.00 0.00 1.75
1692 1724 6.205853 AGACGGCAAAACATAAAACTGTGATA 59.794 34.615 0.00 0.00 0.00 2.15
1693 1725 5.009610 AGACGGCAAAACATAAAACTGTGAT 59.990 36.000 0.00 0.00 0.00 3.06
1694 1726 4.336993 AGACGGCAAAACATAAAACTGTGA 59.663 37.500 0.00 0.00 0.00 3.58
1695 1727 4.606961 AGACGGCAAAACATAAAACTGTG 58.393 39.130 0.00 0.00 0.00 3.66
1696 1728 4.911514 AGACGGCAAAACATAAAACTGT 57.088 36.364 0.00 0.00 0.00 3.55
1697 1729 5.040635 ACAAGACGGCAAAACATAAAACTG 58.959 37.500 0.00 0.00 0.00 3.16
1698 1730 5.040635 CACAAGACGGCAAAACATAAAACT 58.959 37.500 0.00 0.00 0.00 2.66
1699 1731 4.801516 ACACAAGACGGCAAAACATAAAAC 59.198 37.500 0.00 0.00 0.00 2.43
1700 1732 5.000012 ACACAAGACGGCAAAACATAAAA 58.000 34.783 0.00 0.00 0.00 1.52
1701 1733 4.640789 ACACAAGACGGCAAAACATAAA 57.359 36.364 0.00 0.00 0.00 1.40
1702 1734 4.336993 AGAACACAAGACGGCAAAACATAA 59.663 37.500 0.00 0.00 0.00 1.90
1703 1735 3.880490 AGAACACAAGACGGCAAAACATA 59.120 39.130 0.00 0.00 0.00 2.29
1704 1736 2.687935 AGAACACAAGACGGCAAAACAT 59.312 40.909 0.00 0.00 0.00 2.71
1705 1737 2.088423 AGAACACAAGACGGCAAAACA 58.912 42.857 0.00 0.00 0.00 2.83
1706 1738 2.354821 AGAGAACACAAGACGGCAAAAC 59.645 45.455 0.00 0.00 0.00 2.43
1707 1739 2.612212 GAGAGAACACAAGACGGCAAAA 59.388 45.455 0.00 0.00 0.00 2.44
1708 1740 2.210116 GAGAGAACACAAGACGGCAAA 58.790 47.619 0.00 0.00 0.00 3.68
1709 1741 1.540363 GGAGAGAACACAAGACGGCAA 60.540 52.381 0.00 0.00 0.00 4.52
1710 1742 0.033504 GGAGAGAACACAAGACGGCA 59.966 55.000 0.00 0.00 0.00 5.69
1711 1743 0.033504 TGGAGAGAACACAAGACGGC 59.966 55.000 0.00 0.00 0.00 5.68
1712 1744 2.738846 CAATGGAGAGAACACAAGACGG 59.261 50.000 0.00 0.00 0.00 4.79
1713 1745 2.158449 GCAATGGAGAGAACACAAGACG 59.842 50.000 0.00 0.00 0.00 4.18
1714 1746 2.485814 GGCAATGGAGAGAACACAAGAC 59.514 50.000 0.00 0.00 0.00 3.01
1715 1747 2.106338 TGGCAATGGAGAGAACACAAGA 59.894 45.455 0.00 0.00 0.00 3.02
1716 1748 2.227388 GTGGCAATGGAGAGAACACAAG 59.773 50.000 0.00 0.00 0.00 3.16
1717 1749 2.229792 GTGGCAATGGAGAGAACACAA 58.770 47.619 0.00 0.00 0.00 3.33
1718 1750 1.545428 GGTGGCAATGGAGAGAACACA 60.545 52.381 0.00 0.00 0.00 3.72
1719 1751 1.168714 GGTGGCAATGGAGAGAACAC 58.831 55.000 0.00 0.00 0.00 3.32
1720 1752 1.067295 AGGTGGCAATGGAGAGAACA 58.933 50.000 0.00 0.00 0.00 3.18
1721 1753 1.003580 TCAGGTGGCAATGGAGAGAAC 59.996 52.381 0.00 0.00 0.00 3.01
1722 1754 1.280133 CTCAGGTGGCAATGGAGAGAA 59.720 52.381 4.98 0.00 0.00 2.87
1723 1755 0.907486 CTCAGGTGGCAATGGAGAGA 59.093 55.000 4.98 0.00 0.00 3.10
1724 1756 0.107312 CCTCAGGTGGCAATGGAGAG 60.107 60.000 10.94 4.89 0.00 3.20
1725 1757 0.842030 ACCTCAGGTGGCAATGGAGA 60.842 55.000 0.00 0.00 32.98 3.71
1726 1758 0.911769 TACCTCAGGTGGCAATGGAG 59.088 55.000 6.61 0.00 36.19 3.86
1727 1759 1.281867 CTTACCTCAGGTGGCAATGGA 59.718 52.381 6.61 0.00 36.19 3.41
1728 1760 1.755179 CTTACCTCAGGTGGCAATGG 58.245 55.000 6.61 0.00 36.19 3.16
1729 1761 1.098050 GCTTACCTCAGGTGGCAATG 58.902 55.000 6.61 0.00 36.19 2.82
1730 1762 0.995024 AGCTTACCTCAGGTGGCAAT 59.005 50.000 20.95 3.71 37.88 3.56
1731 1763 1.278127 GTAGCTTACCTCAGGTGGCAA 59.722 52.381 20.95 2.30 37.88 4.52
1732 1764 0.902531 GTAGCTTACCTCAGGTGGCA 59.097 55.000 20.95 8.35 37.88 4.92
1733 1765 0.179108 CGTAGCTTACCTCAGGTGGC 60.179 60.000 6.61 11.12 36.19 5.01
1748 1780 3.475774 GCGTTGACCGGTGCGTAG 61.476 66.667 14.63 0.00 36.94 3.51
1752 1784 4.025401 CAAGGCGTTGACCGGTGC 62.025 66.667 14.63 9.45 35.46 5.01
1753 1785 2.280524 TCAAGGCGTTGACCGGTG 60.281 61.111 14.63 0.00 37.79 4.94
1759 1791 1.885388 CACACGGTCAAGGCGTTGA 60.885 57.895 17.46 17.46 40.55 3.18
1760 1792 0.876777 TACACACGGTCAAGGCGTTG 60.877 55.000 12.91 12.91 34.67 4.10
1761 1793 0.599204 CTACACACGGTCAAGGCGTT 60.599 55.000 0.00 0.00 0.00 4.84
1762 1794 1.006571 CTACACACGGTCAAGGCGT 60.007 57.895 0.00 0.00 0.00 5.68
1763 1795 0.241749 TACTACACACGGTCAAGGCG 59.758 55.000 0.00 0.00 0.00 5.52
1764 1796 2.064014 GTTACTACACACGGTCAAGGC 58.936 52.381 0.00 0.00 0.00 4.35
1765 1797 3.005050 TGAGTTACTACACACGGTCAAGG 59.995 47.826 0.00 0.00 0.00 3.61
1766 1798 3.979495 GTGAGTTACTACACACGGTCAAG 59.021 47.826 9.07 0.00 36.41 3.02
1767 1799 3.243501 GGTGAGTTACTACACACGGTCAA 60.244 47.826 13.72 0.00 43.95 3.18
1768 1800 2.294233 GGTGAGTTACTACACACGGTCA 59.706 50.000 13.72 0.00 43.95 4.02
1769 1801 2.555757 AGGTGAGTTACTACACACGGTC 59.444 50.000 13.72 1.22 43.95 4.79
1770 1802 2.590821 AGGTGAGTTACTACACACGGT 58.409 47.619 13.72 0.00 43.95 4.83
1771 1803 3.314553 CAAGGTGAGTTACTACACACGG 58.685 50.000 13.72 2.90 43.95 4.94
1772 1804 3.314553 CCAAGGTGAGTTACTACACACG 58.685 50.000 13.72 0.00 43.95 4.49
1773 1805 3.064931 GCCAAGGTGAGTTACTACACAC 58.935 50.000 13.72 5.91 42.79 3.82
1774 1806 2.701423 TGCCAAGGTGAGTTACTACACA 59.299 45.455 13.72 0.00 38.57 3.72
1775 1807 3.006537 TCTGCCAAGGTGAGTTACTACAC 59.993 47.826 6.46 6.46 36.44 2.90
1776 1808 3.236047 TCTGCCAAGGTGAGTTACTACA 58.764 45.455 0.00 0.00 0.00 2.74
1777 1809 3.955650 TCTGCCAAGGTGAGTTACTAC 57.044 47.619 0.00 0.00 0.00 2.73
1778 1810 5.304614 GGATATCTGCCAAGGTGAGTTACTA 59.695 44.000 2.05 0.00 0.00 1.82
1779 1811 4.101741 GGATATCTGCCAAGGTGAGTTACT 59.898 45.833 2.05 0.00 0.00 2.24
1780 1812 4.141711 TGGATATCTGCCAAGGTGAGTTAC 60.142 45.833 2.05 0.00 31.13 2.50
1781 1813 4.037222 TGGATATCTGCCAAGGTGAGTTA 58.963 43.478 2.05 0.00 31.13 2.24
1782 1814 2.846206 TGGATATCTGCCAAGGTGAGTT 59.154 45.455 2.05 0.00 31.13 3.01
1783 1815 2.171448 GTGGATATCTGCCAAGGTGAGT 59.829 50.000 2.05 0.00 37.12 3.41
1784 1816 2.171237 TGTGGATATCTGCCAAGGTGAG 59.829 50.000 2.05 0.00 37.12 3.51
1785 1817 2.195727 TGTGGATATCTGCCAAGGTGA 58.804 47.619 2.05 0.00 37.12 4.02
1786 1818 2.715749 TGTGGATATCTGCCAAGGTG 57.284 50.000 2.05 0.00 37.12 4.00
1787 1819 3.976654 ACTATGTGGATATCTGCCAAGGT 59.023 43.478 2.05 0.00 37.12 3.50
1788 1820 4.630644 ACTATGTGGATATCTGCCAAGG 57.369 45.455 2.05 0.00 37.12 3.61
1812 1844 9.693739 AGCTGACTAACATGTAGCTAGATATAT 57.306 33.333 16.61 0.00 42.45 0.86
1814 1846 9.521841 TTAGCTGACTAACATGTAGCTAGATAT 57.478 33.333 20.83 4.40 44.77 1.63
1815 1847 8.919777 TTAGCTGACTAACATGTAGCTAGATA 57.080 34.615 20.83 9.31 44.77 1.98
1816 1848 7.825331 TTAGCTGACTAACATGTAGCTAGAT 57.175 36.000 20.83 0.00 44.77 1.98
1817 1849 7.640597 TTTAGCTGACTAACATGTAGCTAGA 57.359 36.000 20.83 16.39 44.77 2.43
1818 1850 8.879342 AATTTAGCTGACTAACATGTAGCTAG 57.121 34.615 20.83 12.61 44.77 3.42
1819 1851 9.314321 GAAATTTAGCTGACTAACATGTAGCTA 57.686 33.333 18.92 18.92 42.45 3.32
1820 1852 7.010552 CGAAATTTAGCTGACTAACATGTAGCT 59.989 37.037 20.67 20.67 45.74 3.32
1821 1853 7.010183 TCGAAATTTAGCTGACTAACATGTAGC 59.990 37.037 9.14 9.14 38.11 3.58
1822 1854 8.407457 TCGAAATTTAGCTGACTAACATGTAG 57.593 34.615 0.00 0.00 38.11 2.74
1823 1855 8.766000 TTCGAAATTTAGCTGACTAACATGTA 57.234 30.769 0.00 0.00 38.11 2.29
1824 1856 7.667043 TTCGAAATTTAGCTGACTAACATGT 57.333 32.000 0.00 0.00 38.11 3.21
1825 1857 9.214953 GAATTCGAAATTTAGCTGACTAACATG 57.785 33.333 0.00 0.00 38.11 3.21
1826 1858 8.116753 CGAATTCGAAATTTAGCTGACTAACAT 58.883 33.333 23.29 0.00 43.02 2.71
1827 1859 7.412563 CCGAATTCGAAATTTAGCTGACTAACA 60.413 37.037 28.76 0.00 43.02 2.41
1828 1860 6.900299 CCGAATTCGAAATTTAGCTGACTAAC 59.100 38.462 28.76 0.00 43.02 2.34
1829 1861 6.814644 TCCGAATTCGAAATTTAGCTGACTAA 59.185 34.615 28.76 0.00 43.02 2.24
1830 1862 6.334989 TCCGAATTCGAAATTTAGCTGACTA 58.665 36.000 28.76 0.00 43.02 2.59
1831 1863 5.175859 TCCGAATTCGAAATTTAGCTGACT 58.824 37.500 28.76 0.00 43.02 3.41
1832 1864 5.464965 TCCGAATTCGAAATTTAGCTGAC 57.535 39.130 28.76 0.00 43.02 3.51
1833 1865 5.236478 GGATCCGAATTCGAAATTTAGCTGA 59.764 40.000 28.76 13.20 43.02 4.26
1834 1866 5.444122 GGATCCGAATTCGAAATTTAGCTG 58.556 41.667 28.76 8.15 43.02 4.24
1835 1867 4.211374 CGGATCCGAATTCGAAATTTAGCT 59.789 41.667 30.62 1.73 43.02 3.32
1836 1868 4.025145 ACGGATCCGAATTCGAAATTTAGC 60.025 41.667 39.55 9.20 43.02 3.09
1837 1869 5.233476 TGACGGATCCGAATTCGAAATTTAG 59.767 40.000 39.55 14.83 43.02 1.85
1838 1870 5.110598 TGACGGATCCGAATTCGAAATTTA 58.889 37.500 39.55 7.80 43.02 1.40
1839 1871 3.936453 TGACGGATCCGAATTCGAAATTT 59.064 39.130 39.55 13.36 43.02 1.82
1840 1872 3.527533 TGACGGATCCGAATTCGAAATT 58.472 40.909 39.55 13.94 43.02 1.82
1841 1873 3.173668 TGACGGATCCGAATTCGAAAT 57.826 42.857 39.55 20.17 43.02 2.17
1842 1874 2.658373 TGACGGATCCGAATTCGAAA 57.342 45.000 39.55 16.39 43.02 3.46
1843 1875 2.658373 TTGACGGATCCGAATTCGAA 57.342 45.000 39.55 18.96 43.02 3.71
1844 1876 2.882927 ATTGACGGATCCGAATTCGA 57.117 45.000 39.55 25.55 43.02 3.71
1845 1877 3.308595 TCAAATTGACGGATCCGAATTCG 59.691 43.478 39.55 23.58 42.83 3.34
1846 1878 4.875544 TCAAATTGACGGATCCGAATTC 57.124 40.909 39.55 26.16 42.83 2.17
1847 1879 5.356751 TCATTCAAATTGACGGATCCGAATT 59.643 36.000 39.55 29.40 42.83 2.17
1848 1880 4.881273 TCATTCAAATTGACGGATCCGAAT 59.119 37.500 39.55 25.72 42.83 3.34
1849 1881 4.257731 TCATTCAAATTGACGGATCCGAA 58.742 39.130 39.55 24.63 42.83 4.30
1850 1882 3.867857 TCATTCAAATTGACGGATCCGA 58.132 40.909 39.55 19.09 42.83 4.55
1851 1883 4.496341 CCTTCATTCAAATTGACGGATCCG 60.496 45.833 32.20 32.20 46.03 4.18
1852 1884 4.640201 TCCTTCATTCAAATTGACGGATCC 59.360 41.667 0.00 0.00 0.00 3.36
1853 1885 5.586243 TCTCCTTCATTCAAATTGACGGATC 59.414 40.000 0.00 0.00 31.14 3.36
1854 1886 5.500234 TCTCCTTCATTCAAATTGACGGAT 58.500 37.500 0.00 0.00 31.14 4.18
1855 1887 4.905429 TCTCCTTCATTCAAATTGACGGA 58.095 39.130 0.00 0.00 0.00 4.69
1856 1888 5.392380 CCTTCTCCTTCATTCAAATTGACGG 60.392 44.000 0.00 0.00 0.00 4.79
1857 1889 5.412594 TCCTTCTCCTTCATTCAAATTGACG 59.587 40.000 0.00 0.00 0.00 4.35
1858 1890 6.824305 TCCTTCTCCTTCATTCAAATTGAC 57.176 37.500 0.00 0.00 0.00 3.18
1859 1891 7.233632 TCTTCCTTCTCCTTCATTCAAATTGA 58.766 34.615 0.00 0.00 0.00 2.57
1860 1892 7.458409 TCTTCCTTCTCCTTCATTCAAATTG 57.542 36.000 0.00 0.00 0.00 2.32
1861 1893 7.066766 CGATCTTCCTTCTCCTTCATTCAAATT 59.933 37.037 0.00 0.00 0.00 1.82
1862 1894 6.541641 CGATCTTCCTTCTCCTTCATTCAAAT 59.458 38.462 0.00 0.00 0.00 2.32
1863 1895 5.877012 CGATCTTCCTTCTCCTTCATTCAAA 59.123 40.000 0.00 0.00 0.00 2.69
1864 1896 5.046304 ACGATCTTCCTTCTCCTTCATTCAA 60.046 40.000 0.00 0.00 0.00 2.69
1865 1897 4.467795 ACGATCTTCCTTCTCCTTCATTCA 59.532 41.667 0.00 0.00 0.00 2.57
1866 1898 5.017294 ACGATCTTCCTTCTCCTTCATTC 57.983 43.478 0.00 0.00 0.00 2.67
1867 1899 4.467795 TGACGATCTTCCTTCTCCTTCATT 59.532 41.667 0.00 0.00 0.00 2.57
1868 1900 4.026744 TGACGATCTTCCTTCTCCTTCAT 58.973 43.478 0.00 0.00 0.00 2.57
1869 1901 3.193691 GTGACGATCTTCCTTCTCCTTCA 59.806 47.826 0.00 0.00 0.00 3.02
1870 1902 3.429684 GGTGACGATCTTCCTTCTCCTTC 60.430 52.174 0.00 0.00 0.00 3.46
1871 1903 2.498078 GGTGACGATCTTCCTTCTCCTT 59.502 50.000 0.00 0.00 0.00 3.36
1872 1904 2.104170 GGTGACGATCTTCCTTCTCCT 58.896 52.381 0.00 0.00 0.00 3.69
1873 1905 1.137282 GGGTGACGATCTTCCTTCTCC 59.863 57.143 0.00 0.00 0.00 3.71
1874 1906 1.137282 GGGGTGACGATCTTCCTTCTC 59.863 57.143 0.00 0.00 0.00 2.87
1875 1907 1.196012 GGGGTGACGATCTTCCTTCT 58.804 55.000 0.00 0.00 0.00 2.85
1876 1908 0.902531 TGGGGTGACGATCTTCCTTC 59.097 55.000 0.00 0.00 0.00 3.46
1877 1909 1.584724 ATGGGGTGACGATCTTCCTT 58.415 50.000 0.00 0.00 0.00 3.36
1878 1910 1.584724 AATGGGGTGACGATCTTCCT 58.415 50.000 0.00 0.00 0.00 3.36
1879 1911 2.420058 AAATGGGGTGACGATCTTCC 57.580 50.000 0.00 0.00 0.00 3.46
1880 1912 4.962155 AGATAAATGGGGTGACGATCTTC 58.038 43.478 0.00 0.00 0.00 2.87
1881 1913 6.270000 TGATAGATAAATGGGGTGACGATCTT 59.730 38.462 0.00 0.00 0.00 2.40
1882 1914 5.780282 TGATAGATAAATGGGGTGACGATCT 59.220 40.000 0.00 0.00 0.00 2.75
1883 1915 6.037786 TGATAGATAAATGGGGTGACGATC 57.962 41.667 0.00 0.00 0.00 3.69
1884 1916 6.627087 ATGATAGATAAATGGGGTGACGAT 57.373 37.500 0.00 0.00 0.00 3.73
1885 1917 6.951778 TCTATGATAGATAAATGGGGTGACGA 59.048 38.462 0.00 0.00 0.00 4.20
1886 1918 7.093727 ACTCTATGATAGATAAATGGGGTGACG 60.094 40.741 2.11 0.00 33.66 4.35
1887 1919 8.140112 ACTCTATGATAGATAAATGGGGTGAC 57.860 38.462 2.11 0.00 33.66 3.67
1888 1920 8.742125 AACTCTATGATAGATAAATGGGGTGA 57.258 34.615 2.11 0.00 33.66 4.02
2455 2487 2.498726 CCCTCTCTCTCGCTTGCC 59.501 66.667 0.00 0.00 0.00 4.52
2456 2488 1.608717 TTCCCCTCTCTCTCGCTTGC 61.609 60.000 0.00 0.00 0.00 4.01
2457 2489 0.459489 CTTCCCCTCTCTCTCGCTTG 59.541 60.000 0.00 0.00 0.00 4.01
2458 2490 0.333312 TCTTCCCCTCTCTCTCGCTT 59.667 55.000 0.00 0.00 0.00 4.68
2459 2491 0.333312 TTCTTCCCCTCTCTCTCGCT 59.667 55.000 0.00 0.00 0.00 4.93
2460 2492 0.744281 CTTCTTCCCCTCTCTCTCGC 59.256 60.000 0.00 0.00 0.00 5.03
2461 2493 2.428544 TCTTCTTCCCCTCTCTCTCG 57.571 55.000 0.00 0.00 0.00 4.04
2462 2494 5.069914 GGTTTATCTTCTTCCCCTCTCTCTC 59.930 48.000 0.00 0.00 0.00 3.20
2463 2495 4.966168 GGTTTATCTTCTTCCCCTCTCTCT 59.034 45.833 0.00 0.00 0.00 3.10
2464 2496 4.202172 CGGTTTATCTTCTTCCCCTCTCTC 60.202 50.000 0.00 0.00 0.00 3.20
2465 2497 3.707102 CGGTTTATCTTCTTCCCCTCTCT 59.293 47.826 0.00 0.00 0.00 3.10
2466 2498 3.451540 ACGGTTTATCTTCTTCCCCTCTC 59.548 47.826 0.00 0.00 0.00 3.20
2467 2499 3.451890 ACGGTTTATCTTCTTCCCCTCT 58.548 45.455 0.00 0.00 0.00 3.69
2468 2500 3.908643 ACGGTTTATCTTCTTCCCCTC 57.091 47.619 0.00 0.00 0.00 4.30
2469 2501 3.308188 CCAACGGTTTATCTTCTTCCCCT 60.308 47.826 0.00 0.00 0.00 4.79
2470 2502 3.014623 CCAACGGTTTATCTTCTTCCCC 58.985 50.000 0.00 0.00 0.00 4.81
2471 2503 3.946606 TCCAACGGTTTATCTTCTTCCC 58.053 45.455 0.00 0.00 0.00 3.97
2472 2504 5.429130 AGATCCAACGGTTTATCTTCTTCC 58.571 41.667 8.86 0.00 0.00 3.46
2473 2505 6.594159 TCAAGATCCAACGGTTTATCTTCTTC 59.406 38.462 18.52 0.00 36.73 2.87
2474 2506 6.472887 TCAAGATCCAACGGTTTATCTTCTT 58.527 36.000 18.52 9.12 36.73 2.52
2475 2507 6.049955 TCAAGATCCAACGGTTTATCTTCT 57.950 37.500 18.52 4.75 36.73 2.85
2476 2508 6.292381 CGATCAAGATCCAACGGTTTATCTTC 60.292 42.308 18.52 11.26 36.73 2.87
2477 2509 5.523916 CGATCAAGATCCAACGGTTTATCTT 59.476 40.000 16.77 16.77 38.82 2.40
2478 2510 5.050490 CGATCAAGATCCAACGGTTTATCT 58.950 41.667 8.86 8.86 34.40 1.98
2479 2511 5.047847 TCGATCAAGATCCAACGGTTTATC 58.952 41.667 4.58 0.00 34.40 1.75
2480 2512 5.018539 TCGATCAAGATCCAACGGTTTAT 57.981 39.130 4.58 0.00 34.40 1.40
2481 2513 4.459390 TCGATCAAGATCCAACGGTTTA 57.541 40.909 4.58 0.00 34.40 2.01
2482 2514 3.328382 TCGATCAAGATCCAACGGTTT 57.672 42.857 4.58 0.00 34.40 3.27
2483 2515 3.000727 GTTCGATCAAGATCCAACGGTT 58.999 45.455 5.10 0.00 31.33 4.44
2484 2516 2.028476 TGTTCGATCAAGATCCAACGGT 60.028 45.455 13.32 0.00 40.34 4.83
2485 2517 2.604914 CTGTTCGATCAAGATCCAACGG 59.395 50.000 12.70 12.70 40.34 4.44
2486 2518 3.254060 ACTGTTCGATCAAGATCCAACG 58.746 45.455 13.32 11.03 40.34 4.10
2487 2519 4.690748 TCAACTGTTCGATCAAGATCCAAC 59.309 41.667 11.91 11.91 38.73 3.77
2488 2520 4.893608 TCAACTGTTCGATCAAGATCCAA 58.106 39.130 4.58 0.00 34.40 3.53
2489 2521 4.535526 TCAACTGTTCGATCAAGATCCA 57.464 40.909 4.58 0.00 34.40 3.41
2490 2522 6.042777 TGTATCAACTGTTCGATCAAGATCC 58.957 40.000 4.58 1.38 34.40 3.36
2491 2523 6.199908 CCTGTATCAACTGTTCGATCAAGATC 59.800 42.308 8.17 0.00 34.56 2.75
2492 2524 6.045318 CCTGTATCAACTGTTCGATCAAGAT 58.955 40.000 8.17 4.77 0.00 2.40
2493 2525 5.185056 TCCTGTATCAACTGTTCGATCAAGA 59.815 40.000 8.17 0.00 0.00 3.02
2494 2526 5.410924 TCCTGTATCAACTGTTCGATCAAG 58.589 41.667 8.17 7.65 0.00 3.02
2495 2527 5.400066 TCCTGTATCAACTGTTCGATCAA 57.600 39.130 8.17 0.00 0.00 2.57
2496 2528 5.400066 TTCCTGTATCAACTGTTCGATCA 57.600 39.130 8.17 0.00 0.00 2.92
2497 2529 6.183360 CCTTTTCCTGTATCAACTGTTCGATC 60.183 42.308 8.17 0.00 0.00 3.69
2498 2530 5.643777 CCTTTTCCTGTATCAACTGTTCGAT 59.356 40.000 9.35 9.35 0.00 3.59
2499 2531 4.994852 CCTTTTCCTGTATCAACTGTTCGA 59.005 41.667 0.00 0.00 0.00 3.71
2500 2532 4.994852 TCCTTTTCCTGTATCAACTGTTCG 59.005 41.667 0.00 0.00 0.00 3.95
2501 2533 6.231211 TCTCCTTTTCCTGTATCAACTGTTC 58.769 40.000 0.00 0.00 0.00 3.18
2502 2534 6.187727 TCTCCTTTTCCTGTATCAACTGTT 57.812 37.500 0.00 0.00 0.00 3.16
2503 2535 5.825593 TCTCCTTTTCCTGTATCAACTGT 57.174 39.130 0.00 0.00 0.00 3.55
2504 2536 6.036517 CGATTCTCCTTTTCCTGTATCAACTG 59.963 42.308 0.00 0.00 0.00 3.16
2505 2537 6.070767 TCGATTCTCCTTTTCCTGTATCAACT 60.071 38.462 0.00 0.00 0.00 3.16
2506 2538 6.036191 GTCGATTCTCCTTTTCCTGTATCAAC 59.964 42.308 0.00 0.00 0.00 3.18
2507 2539 6.070767 AGTCGATTCTCCTTTTCCTGTATCAA 60.071 38.462 0.00 0.00 0.00 2.57
2508 2540 5.422331 AGTCGATTCTCCTTTTCCTGTATCA 59.578 40.000 0.00 0.00 0.00 2.15
2509 2541 5.751028 CAGTCGATTCTCCTTTTCCTGTATC 59.249 44.000 0.00 0.00 0.00 2.24
2510 2542 5.395768 CCAGTCGATTCTCCTTTTCCTGTAT 60.396 44.000 0.00 0.00 0.00 2.29
2511 2543 4.081642 CCAGTCGATTCTCCTTTTCCTGTA 60.082 45.833 0.00 0.00 0.00 2.74
2512 2544 3.307059 CCAGTCGATTCTCCTTTTCCTGT 60.307 47.826 0.00 0.00 0.00 4.00
2513 2545 3.265791 CCAGTCGATTCTCCTTTTCCTG 58.734 50.000 0.00 0.00 0.00 3.86
2514 2546 2.907042 ACCAGTCGATTCTCCTTTTCCT 59.093 45.455 0.00 0.00 0.00 3.36
2515 2547 3.263261 GACCAGTCGATTCTCCTTTTCC 58.737 50.000 0.00 0.00 0.00 3.13
2545 2577 4.079980 TCCAGGTCAATCGACTGAAAAA 57.920 40.909 0.00 0.00 42.21 1.94
2546 2578 3.762407 TCCAGGTCAATCGACTGAAAA 57.238 42.857 0.00 0.00 42.21 2.29
2547 2579 3.399330 GTTCCAGGTCAATCGACTGAAA 58.601 45.455 0.00 0.00 42.21 2.69
2548 2580 2.289444 GGTTCCAGGTCAATCGACTGAA 60.289 50.000 0.00 0.00 42.21 3.02
2549 2581 1.275291 GGTTCCAGGTCAATCGACTGA 59.725 52.381 0.00 0.00 42.21 3.41
2550 2582 1.726853 GGTTCCAGGTCAATCGACTG 58.273 55.000 0.00 0.00 42.21 3.51
2551 2583 0.246635 CGGTTCCAGGTCAATCGACT 59.753 55.000 0.00 0.00 42.21 4.18
2552 2584 0.739813 CCGGTTCCAGGTCAATCGAC 60.740 60.000 0.00 0.00 41.80 4.20
2553 2585 1.189524 ACCGGTTCCAGGTCAATCGA 61.190 55.000 0.00 0.00 37.44 3.59
2554 2586 1.295423 ACCGGTTCCAGGTCAATCG 59.705 57.895 0.00 0.00 37.44 3.34
2564 2596 0.182775 AATGCATAGGGACCGGTTCC 59.817 55.000 26.01 26.01 45.00 3.62
2565 2597 2.490991 GTAATGCATAGGGACCGGTTC 58.509 52.381 9.42 6.37 0.00 3.62
2566 2598 1.142262 GGTAATGCATAGGGACCGGTT 59.858 52.381 9.42 0.00 0.00 4.44
2567 2599 0.763035 GGTAATGCATAGGGACCGGT 59.237 55.000 6.92 6.92 0.00 5.28
2568 2600 0.036306 GGGTAATGCATAGGGACCGG 59.964 60.000 0.00 0.00 0.00 5.28
2569 2601 0.762418 TGGGTAATGCATAGGGACCG 59.238 55.000 0.00 0.00 0.00 4.79
2570 2602 2.375174 TCATGGGTAATGCATAGGGACC 59.625 50.000 0.00 5.54 36.11 4.46
2571 2603 3.788227 TCATGGGTAATGCATAGGGAC 57.212 47.619 0.00 0.00 36.11 4.46
2572 2604 4.805140 TTTCATGGGTAATGCATAGGGA 57.195 40.909 0.00 0.00 36.11 4.20
2573 2605 5.363580 ACTTTTTCATGGGTAATGCATAGGG 59.636 40.000 0.00 0.00 36.11 3.53
2574 2606 6.275335 CACTTTTTCATGGGTAATGCATAGG 58.725 40.000 0.00 0.00 36.11 2.57
2575 2607 5.750067 GCACTTTTTCATGGGTAATGCATAG 59.250 40.000 0.00 0.00 36.11 2.23
2576 2608 5.659463 GCACTTTTTCATGGGTAATGCATA 58.341 37.500 0.00 0.00 36.11 3.14
2577 2609 4.506758 GCACTTTTTCATGGGTAATGCAT 58.493 39.130 0.00 0.00 36.11 3.96
2578 2610 3.613671 CGCACTTTTTCATGGGTAATGCA 60.614 43.478 0.00 0.00 36.11 3.96
2579 2611 2.923020 CGCACTTTTTCATGGGTAATGC 59.077 45.455 0.00 0.00 36.11 3.56
2580 2612 4.173036 ACGCACTTTTTCATGGGTAATG 57.827 40.909 0.00 0.00 39.92 1.90
2581 2613 4.864704 AACGCACTTTTTCATGGGTAAT 57.135 36.364 0.00 0.00 40.73 1.89
2582 2614 5.708230 AGATAACGCACTTTTTCATGGGTAA 59.292 36.000 0.00 0.00 40.73 2.85
2583 2615 5.123186 CAGATAACGCACTTTTTCATGGGTA 59.877 40.000 0.00 0.00 40.73 3.69
2584 2616 4.079253 AGATAACGCACTTTTTCATGGGT 58.921 39.130 0.00 0.00 43.16 4.51
2585 2617 4.155826 TCAGATAACGCACTTTTTCATGGG 59.844 41.667 0.00 0.00 35.06 4.00
2586 2618 5.295431 TCAGATAACGCACTTTTTCATGG 57.705 39.130 0.00 0.00 0.00 3.66
2587 2619 8.950961 CATTATCAGATAACGCACTTTTTCATG 58.049 33.333 4.91 0.00 0.00 3.07
2588 2620 8.677300 ACATTATCAGATAACGCACTTTTTCAT 58.323 29.630 4.91 0.00 0.00 2.57
2589 2621 8.039603 ACATTATCAGATAACGCACTTTTTCA 57.960 30.769 4.91 0.00 0.00 2.69
2590 2622 9.638300 CTACATTATCAGATAACGCACTTTTTC 57.362 33.333 4.91 0.00 0.00 2.29
2591 2623 9.378551 TCTACATTATCAGATAACGCACTTTTT 57.621 29.630 4.91 0.00 0.00 1.94
2592 2624 8.942338 TCTACATTATCAGATAACGCACTTTT 57.058 30.769 4.91 0.00 0.00 2.27
2593 2625 8.982685 CATCTACATTATCAGATAACGCACTTT 58.017 33.333 4.91 0.00 30.32 2.66
2594 2626 8.144478 ACATCTACATTATCAGATAACGCACTT 58.856 33.333 4.91 0.00 30.32 3.16
2595 2627 7.661968 ACATCTACATTATCAGATAACGCACT 58.338 34.615 4.91 0.00 30.32 4.40
2596 2628 7.875316 ACATCTACATTATCAGATAACGCAC 57.125 36.000 4.91 0.00 30.32 5.34
2597 2629 9.974980 TTTACATCTACATTATCAGATAACGCA 57.025 29.630 4.91 0.00 30.32 5.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.