Multiple sequence alignment - TraesCS2B01G508000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G508000 chr2B 100.000 3969 0 0 1 3969 704411204 704415172 0.000000e+00 7330.0
1 TraesCS2B01G508000 chr2B 90.408 490 47 0 3409 3898 46351632 46352121 0.000000e+00 645.0
2 TraesCS2B01G508000 chr2B 82.004 539 93 4 3410 3946 740855082 740855618 4.680000e-124 455.0
3 TraesCS2B01G508000 chr2B 81.314 487 80 8 1911 2390 704722470 704722952 6.220000e-103 385.0
4 TraesCS2B01G508000 chr2B 93.452 168 8 3 611 776 385568702 385568868 3.060000e-61 246.0
5 TraesCS2B01G508000 chr2B 91.429 175 15 0 1334 1508 704580003 704580177 1.430000e-59 241.0
6 TraesCS2B01G508000 chr2B 91.429 175 15 0 1334 1508 704722096 704722270 1.430000e-59 241.0
7 TraesCS2B01G508000 chr2B 84.426 244 33 5 1911 2152 704580343 704580583 6.630000e-58 235.0
8 TraesCS2B01G508000 chr2B 88.068 176 21 0 1336 1511 704426337 704426512 4.020000e-50 209.0
9 TraesCS2B01G508000 chr2B 85.311 177 26 0 1334 1510 704295691 704295867 2.440000e-42 183.0
10 TraesCS2B01G508000 chr2B 85.185 108 15 1 781 888 560893482 560893376 4.190000e-20 110.0
11 TraesCS2B01G508000 chr2D 91.199 1318 90 14 1918 3217 584607553 584608862 0.000000e+00 1768.0
12 TraesCS2B01G508000 chr2D 86.752 702 58 19 915 1599 584606737 584607420 0.000000e+00 749.0
13 TraesCS2B01G508000 chr2D 80.627 542 103 2 3405 3945 566577599 566577059 6.130000e-113 418.0
14 TraesCS2B01G508000 chr2D 81.504 492 69 18 1911 2388 584657957 584658440 6.220000e-103 385.0
15 TraesCS2B01G508000 chr2D 81.314 487 76 12 1911 2388 584662121 584662601 8.050000e-102 381.0
16 TraesCS2B01G508000 chr2D 89.892 277 24 2 1 273 584596370 584596646 1.750000e-93 353.0
17 TraesCS2B01G508000 chr2D 78.728 503 76 17 1919 2392 594997989 594997489 1.390000e-79 307.0
18 TraesCS2B01G508000 chr2D 93.258 178 12 0 1334 1511 584661715 584661892 3.040000e-66 263.0
19 TraesCS2B01G508000 chr2D 90.050 201 17 3 1310 1509 584657544 584657742 1.420000e-64 257.0
20 TraesCS2B01G508000 chr2D 85.714 168 24 0 995 1162 584661344 584661511 1.130000e-40 178.0
21 TraesCS2B01G508000 chr2D 82.812 192 33 0 1000 1191 594999283 594999092 5.270000e-39 172.0
22 TraesCS2B01G508000 chr2D 84.615 169 25 1 1020 1188 584668261 584668428 2.450000e-37 167.0
23 TraesCS2B01G508000 chr2D 85.119 168 19 4 1000 1162 584781350 584781516 2.450000e-37 167.0
24 TraesCS2B01G508000 chr2D 82.738 168 29 0 995 1162 584657182 584657349 2.470000e-32 150.0
25 TraesCS2B01G508000 chr2D 87.970 133 7 1 3244 3376 584615497 584615620 8.890000e-32 148.0
26 TraesCS2B01G508000 chr2D 85.606 132 19 0 998 1129 584542722 584542853 5.350000e-29 139.0
27 TraesCS2B01G508000 chr2D 97.222 36 1 0 3208 3243 584615415 584615450 1.190000e-05 62.1
28 TraesCS2B01G508000 chr2A 86.763 899 79 21 781 1669 718818544 718819412 0.000000e+00 965.0
29 TraesCS2B01G508000 chr2A 91.021 568 39 8 2469 3028 718819883 718820446 0.000000e+00 756.0
30 TraesCS2B01G508000 chr2A 91.575 546 25 12 2 532 718817941 718818480 0.000000e+00 734.0
31 TraesCS2B01G508000 chr2A 76.725 1203 218 39 1918 3080 718838165 718839345 7.290000e-172 614.0
32 TraesCS2B01G508000 chr2A 76.824 1083 205 35 1914 2974 718884363 718885421 5.760000e-158 568.0
33 TraesCS2B01G508000 chr2A 84.454 476 74 0 3410 3885 592777059 592777534 1.670000e-128 470.0
34 TraesCS2B01G508000 chr2A 85.468 406 53 5 2501 2906 718836368 718836767 6.130000e-113 418.0
35 TraesCS2B01G508000 chr2A 88.921 343 29 3 1803 2136 718819484 718819826 7.940000e-112 414.0
36 TraesCS2B01G508000 chr2A 90.306 196 17 1 1318 1511 718883965 718884160 5.090000e-64 255.0
37 TraesCS2B01G508000 chr2A 90.604 149 13 1 995 1143 718834021 718834168 3.130000e-46 196.0
38 TraesCS2B01G508000 chr2A 86.709 158 19 2 1000 1157 718929214 718929369 1.470000e-39 174.0
39 TraesCS2B01G508000 chr2A 86.755 151 20 0 1000 1150 718916821 718916971 6.820000e-38 169.0
40 TraesCS2B01G508000 chr4B 88.536 567 58 2 3404 3969 94179673 94180233 0.000000e+00 680.0
41 TraesCS2B01G508000 chr4B 80.000 375 72 3 3410 3783 3839297 3839669 1.410000e-69 274.0
42 TraesCS2B01G508000 chr4B 85.185 108 15 1 781 887 625970268 625970375 4.190000e-20 110.0
43 TraesCS2B01G508000 chr4B 85.577 104 14 1 781 884 606916862 606916760 1.510000e-19 108.0
44 TraesCS2B01G508000 chr4B 85.714 63 9 0 555 617 114070392 114070330 2.560000e-07 67.6
45 TraesCS2B01G508000 chr7D 88.256 562 58 4 3404 3964 370984362 370984916 0.000000e+00 665.0
46 TraesCS2B01G508000 chr7D 79.894 378 74 2 3410 3786 329533305 329532929 3.910000e-70 276.0
47 TraesCS2B01G508000 chr7D 91.061 179 13 3 620 796 617021036 617020859 5.130000e-59 239.0
48 TraesCS2B01G508000 chr7D 89.840 187 16 3 598 782 312574313 312574128 1.840000e-58 237.0
49 TraesCS2B01G508000 chr7D 91.765 170 12 2 618 785 104641101 104641270 6.630000e-58 235.0
50 TraesCS2B01G508000 chr1D 91.156 441 32 4 3490 3926 489243831 489244268 3.420000e-165 592.0
51 TraesCS2B01G508000 chr6D 83.574 554 89 2 3417 3969 259280009 259280561 5.880000e-143 518.0
52 TraesCS2B01G508000 chr6D 89.894 188 13 5 620 802 41542650 41542464 1.840000e-58 237.0
53 TraesCS2B01G508000 chr5D 82.836 536 85 5 3410 3941 91666385 91666917 1.290000e-129 473.0
54 TraesCS2B01G508000 chr5D 85.511 352 48 1 3595 3946 304886325 304886673 8.110000e-97 364.0
55 TraesCS2B01G508000 chr5D 78.378 370 78 2 3410 3778 439376119 439375751 5.130000e-59 239.0
56 TraesCS2B01G508000 chr5D 80.069 291 58 0 3496 3786 225792082 225791792 2.400000e-52 217.0
57 TraesCS2B01G508000 chr5D 74.847 326 55 22 558 871 223647916 223648226 5.390000e-24 122.0
58 TraesCS2B01G508000 chr5B 83.768 499 68 10 3410 3904 349719613 349720102 1.000000e-125 460.0
59 TraesCS2B01G508000 chr3D 79.406 539 88 10 3410 3946 572314900 572315417 3.770000e-95 359.0
60 TraesCS2B01G508000 chr3D 93.064 173 10 2 617 787 556141145 556140973 6.580000e-63 252.0
61 TraesCS2B01G508000 chr3D 92.529 174 10 3 618 789 168948018 168947846 3.060000e-61 246.0
62 TraesCS2B01G508000 chr3D 84.247 146 20 3 1 146 142997972 142998114 5.350000e-29 139.0
63 TraesCS2B01G508000 chr3D 85.577 104 14 1 781 884 87926099 87925997 1.510000e-19 108.0
64 TraesCS2B01G508000 chr4D 88.000 300 35 1 3670 3969 211377242 211377540 1.750000e-93 353.0
65 TraesCS2B01G508000 chr4D 92.571 175 10 3 612 784 62120642 62120469 8.520000e-62 248.0
66 TraesCS2B01G508000 chr4D 85.577 104 14 1 781 884 479687359 479687257 1.510000e-19 108.0
67 TraesCS2B01G508000 chr7B 93.413 167 9 2 620 784 713291907 713291741 3.060000e-61 246.0
68 TraesCS2B01G508000 chr7B 84.404 109 16 1 781 888 586635125 586635017 5.420000e-19 106.0
69 TraesCS2B01G508000 chr7B 86.667 60 4 4 1828 1884 105648677 105648619 3.310000e-06 63.9
70 TraesCS2B01G508000 chr6A 79.545 308 63 0 3493 3800 277550957 277550650 1.860000e-53 220.0
71 TraesCS2B01G508000 chr6A 90.476 63 5 1 577 639 108925748 108925809 9.140000e-12 82.4
72 TraesCS2B01G508000 chr6A 86.792 53 6 1 580 631 72443310 72443258 1.540000e-04 58.4
73 TraesCS2B01G508000 chr1A 80.669 269 52 0 3493 3761 369591493 369591225 4.020000e-50 209.0
74 TraesCS2B01G508000 chr1B 89.677 155 16 0 3810 3964 173055331 173055485 8.700000e-47 198.0
75 TraesCS2B01G508000 chr1B 85.047 107 16 0 781 887 24349151 24349045 4.190000e-20 110.0
76 TraesCS2B01G508000 chr1B 89.474 57 2 4 1828 1881 540339696 540339751 7.120000e-08 69.4
77 TraesCS2B01G508000 chr3B 84.516 155 20 4 1 154 204848083 204848234 2.470000e-32 150.0
78 TraesCS2B01G508000 chr3B 89.286 112 11 1 44 154 469630878 469630767 5.350000e-29 139.0
79 TraesCS2B01G508000 chr6B 86.408 103 14 0 781 883 36133566 36133668 3.240000e-21 113.0
80 TraesCS2B01G508000 chr6B 85.714 105 14 1 781 885 120226233 120226130 4.190000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G508000 chr2B 704411204 704415172 3968 False 7330.000000 7330 100.000000 1 3969 1 chr2B.!!$F4 3968
1 TraesCS2B01G508000 chr2B 740855082 740855618 536 False 455.000000 455 82.004000 3410 3946 1 chr2B.!!$F6 536
2 TraesCS2B01G508000 chr2B 704722096 704722952 856 False 313.000000 385 86.371500 1334 2390 2 chr2B.!!$F8 1056
3 TraesCS2B01G508000 chr2B 704580003 704580583 580 False 238.000000 241 87.927500 1334 2152 2 chr2B.!!$F7 818
4 TraesCS2B01G508000 chr2D 584606737 584608862 2125 False 1258.500000 1768 88.975500 915 3217 2 chr2D.!!$F5 2302
5 TraesCS2B01G508000 chr2D 566577059 566577599 540 True 418.000000 418 80.627000 3405 3945 1 chr2D.!!$R1 540
6 TraesCS2B01G508000 chr2D 584657182 584662601 5419 False 269.000000 385 85.763000 995 2388 6 chr2D.!!$F7 1393
7 TraesCS2B01G508000 chr2D 594997489 594999283 1794 True 239.500000 307 80.770000 1000 2392 2 chr2D.!!$R2 1392
8 TraesCS2B01G508000 chr2A 718817941 718820446 2505 False 717.250000 965 89.570000 2 3028 4 chr2A.!!$F4 3026
9 TraesCS2B01G508000 chr2A 718883965 718885421 1456 False 411.500000 568 83.565000 1318 2974 2 chr2A.!!$F6 1656
10 TraesCS2B01G508000 chr2A 718834021 718839345 5324 False 409.333333 614 84.265667 995 3080 3 chr2A.!!$F5 2085
11 TraesCS2B01G508000 chr4B 94179673 94180233 560 False 680.000000 680 88.536000 3404 3969 1 chr4B.!!$F2 565
12 TraesCS2B01G508000 chr7D 370984362 370984916 554 False 665.000000 665 88.256000 3404 3964 1 chr7D.!!$F2 560
13 TraesCS2B01G508000 chr6D 259280009 259280561 552 False 518.000000 518 83.574000 3417 3969 1 chr6D.!!$F1 552
14 TraesCS2B01G508000 chr5D 91666385 91666917 532 False 473.000000 473 82.836000 3410 3941 1 chr5D.!!$F1 531
15 TraesCS2B01G508000 chr3D 572314900 572315417 517 False 359.000000 359 79.406000 3410 3946 1 chr3D.!!$F2 536

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
635 650 0.033796 ATGTACTCCCTCCGTTCCGA 60.034 55.0 0.00 0.0 0.00 4.55 F
891 909 0.100682 ACGGAGTACTATGCAGCACG 59.899 55.0 0.00 0.0 41.94 5.34 F
904 922 0.301687 CAGCACGTGTCACTGTCAAC 59.698 55.0 18.38 0.0 0.00 3.18 F
912 930 0.304705 GTCACTGTCAACGTGCCAAG 59.695 55.0 0.00 0.0 32.54 3.61 F
1913 3529 0.515564 GAACAAGCTCGCGCCTTTAA 59.484 50.0 0.00 0.0 36.60 1.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2067 3688 0.388520 CCTCGTCGAGCACATGAACA 60.389 55.000 17.02 0.00 0.00 3.18 R
2503 4189 0.447801 CCTCGTCGCCTGAAAAATGG 59.552 55.000 0.00 0.00 0.00 3.16 R
2647 4333 1.356624 GGTGTTGTGACTGCAGCAC 59.643 57.895 25.13 25.13 45.63 4.40 R
2724 4410 4.302455 CAGAGGATTAGCATACCGTTCAG 58.698 47.826 0.00 0.00 0.00 3.02 R
3404 5139 0.029300 CCCAAAATAGCGCACGGATG 59.971 55.000 11.47 2.53 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 102 1.145945 TGATCTCCTGCGGGTAGATCT 59.854 52.381 32.02 15.85 41.46 2.75
136 137 0.390866 ACGTCGCCTCGAAGTCTAGA 60.391 55.000 2.23 0.00 44.06 2.43
160 161 1.068474 CGAAGTAGTCAAACGCCTGG 58.932 55.000 0.00 0.00 0.00 4.45
161 162 0.796927 GAAGTAGTCAAACGCCTGGC 59.203 55.000 9.11 9.11 0.00 4.85
275 285 1.153568 CTCTGCGATGGGAAAGCGA 60.154 57.895 0.00 0.00 41.20 4.93
276 286 0.740868 CTCTGCGATGGGAAAGCGAA 60.741 55.000 0.00 0.00 41.20 4.70
312 322 4.079443 AGAGGATGTACTACTCAGGAAGCT 60.079 45.833 12.34 0.00 33.76 3.74
316 326 3.964411 TGTACTACTCAGGAAGCTAGCA 58.036 45.455 18.83 0.00 0.00 3.49
317 327 3.948473 TGTACTACTCAGGAAGCTAGCAG 59.052 47.826 18.83 6.72 0.00 4.24
318 328 1.754226 ACTACTCAGGAAGCTAGCAGC 59.246 52.381 18.83 7.94 42.84 5.25
332 347 0.396811 AGCAGCGGGTTGAGTTTACT 59.603 50.000 0.00 0.00 0.00 2.24
333 348 1.621814 AGCAGCGGGTTGAGTTTACTA 59.378 47.619 0.00 0.00 0.00 1.82
340 355 4.117685 CGGGTTGAGTTTACTATAGGCAC 58.882 47.826 4.43 0.00 0.00 5.01
361 376 6.092259 GGCACGATAAGTAATGGGCTAATAAG 59.908 42.308 0.00 0.00 0.00 1.73
363 378 7.386848 GCACGATAAGTAATGGGCTAATAAGAA 59.613 37.037 0.00 0.00 0.00 2.52
365 380 9.841295 ACGATAAGTAATGGGCTAATAAGAAAA 57.159 29.630 0.00 0.00 0.00 2.29
413 428 8.766000 TTGAATAATTAGCAGAACAACGACTA 57.234 30.769 0.00 0.00 0.00 2.59
423 438 4.024048 CAGAACAACGACTAAGCAAACCAT 60.024 41.667 0.00 0.00 0.00 3.55
433 448 6.148811 CGACTAAGCAAACCATCTTTTTAGGA 59.851 38.462 0.00 0.00 0.00 2.94
441 456 5.468540 ACCATCTTTTTAGGAAGCAAACC 57.531 39.130 0.00 0.00 0.00 3.27
442 457 4.898861 ACCATCTTTTTAGGAAGCAAACCA 59.101 37.500 0.00 0.00 0.00 3.67
491 506 1.014352 ACAACCGAGACAAGTTGCAC 58.986 50.000 1.81 0.00 45.79 4.57
567 582 7.712639 ACGTACTATCGTTTATTACTCTCTCCA 59.287 37.037 0.00 0.00 41.37 3.86
624 639 7.655490 ACATAAACTACATACGGATGTACTCC 58.345 38.462 16.71 0.00 44.77 3.85
625 640 5.526506 AAACTACATACGGATGTACTCCC 57.473 43.478 16.71 0.00 44.77 4.30
626 641 4.450305 ACTACATACGGATGTACTCCCT 57.550 45.455 16.71 0.00 44.77 4.20
627 642 4.396522 ACTACATACGGATGTACTCCCTC 58.603 47.826 16.71 0.00 44.77 4.30
628 643 2.595238 ACATACGGATGTACTCCCTCC 58.405 52.381 12.79 0.00 44.77 4.30
630 645 4.254721 CGGATGTACTCCCTCCGT 57.745 61.111 14.50 0.00 45.30 4.69
631 646 2.501492 CGGATGTACTCCCTCCGTT 58.499 57.895 14.50 0.00 45.30 4.44
632 647 0.384669 CGGATGTACTCCCTCCGTTC 59.615 60.000 14.50 0.00 45.30 3.95
633 648 0.751452 GGATGTACTCCCTCCGTTCC 59.249 60.000 0.00 0.00 38.19 3.62
634 649 0.384669 GATGTACTCCCTCCGTTCCG 59.615 60.000 0.00 0.00 0.00 4.30
635 650 0.033796 ATGTACTCCCTCCGTTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
636 651 0.251297 TGTACTCCCTCCGTTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
637 652 0.890683 GTACTCCCTCCGTTCCGAAA 59.109 55.000 0.00 0.00 0.00 3.46
638 653 1.479730 GTACTCCCTCCGTTCCGAAAT 59.520 52.381 0.00 0.00 0.00 2.17
639 654 1.856629 ACTCCCTCCGTTCCGAAATA 58.143 50.000 0.00 0.00 0.00 1.40
640 655 2.395619 ACTCCCTCCGTTCCGAAATAT 58.604 47.619 0.00 0.00 0.00 1.28
641 656 3.569491 ACTCCCTCCGTTCCGAAATATA 58.431 45.455 0.00 0.00 0.00 0.86
642 657 3.962718 ACTCCCTCCGTTCCGAAATATAA 59.037 43.478 0.00 0.00 0.00 0.98
643 658 4.038883 ACTCCCTCCGTTCCGAAATATAAG 59.961 45.833 0.00 0.00 0.00 1.73
644 659 3.962718 TCCCTCCGTTCCGAAATATAAGT 59.037 43.478 0.00 0.00 0.00 2.24
645 660 4.038402 TCCCTCCGTTCCGAAATATAAGTC 59.962 45.833 0.00 0.00 0.00 3.01
646 661 4.038883 CCCTCCGTTCCGAAATATAAGTCT 59.961 45.833 0.00 0.00 0.00 3.24
647 662 5.452917 CCCTCCGTTCCGAAATATAAGTCTT 60.453 44.000 0.00 0.00 0.00 3.01
648 663 6.047231 CCTCCGTTCCGAAATATAAGTCTTT 58.953 40.000 0.00 0.00 0.00 2.52
649 664 6.537660 CCTCCGTTCCGAAATATAAGTCTTTT 59.462 38.462 0.00 0.00 0.00 2.27
650 665 7.065443 CCTCCGTTCCGAAATATAAGTCTTTTT 59.935 37.037 0.00 0.00 0.00 1.94
651 666 9.090692 CTCCGTTCCGAAATATAAGTCTTTTTA 57.909 33.333 0.00 0.00 0.00 1.52
652 667 9.434420 TCCGTTCCGAAATATAAGTCTTTTTAA 57.566 29.630 0.00 0.00 0.00 1.52
667 682 9.586435 AAGTCTTTTTAAAGATTCCAACAAGTG 57.414 29.630 8.07 0.00 45.83 3.16
668 683 8.966868 AGTCTTTTTAAAGATTCCAACAAGTGA 58.033 29.630 8.07 0.00 45.83 3.41
669 684 9.020813 GTCTTTTTAAAGATTCCAACAAGTGAC 57.979 33.333 8.07 0.00 45.83 3.67
670 685 8.966868 TCTTTTTAAAGATTCCAACAAGTGACT 58.033 29.630 0.89 0.00 39.95 3.41
673 688 8.740123 TTTAAAGATTCCAACAAGTGACTACA 57.260 30.769 0.00 0.00 0.00 2.74
674 689 8.918202 TTAAAGATTCCAACAAGTGACTACAT 57.082 30.769 0.00 0.00 0.00 2.29
677 692 8.498054 AAGATTCCAACAAGTGACTACATATG 57.502 34.615 0.00 0.00 0.00 1.78
678 693 7.851228 AGATTCCAACAAGTGACTACATATGA 58.149 34.615 10.38 0.00 0.00 2.15
679 694 8.321353 AGATTCCAACAAGTGACTACATATGAA 58.679 33.333 10.38 0.00 0.00 2.57
680 695 7.905604 TTCCAACAAGTGACTACATATGAAG 57.094 36.000 10.38 0.00 0.00 3.02
681 696 5.874810 TCCAACAAGTGACTACATATGAAGC 59.125 40.000 10.38 0.00 0.00 3.86
682 697 5.643348 CCAACAAGTGACTACATATGAAGCA 59.357 40.000 10.38 0.00 0.00 3.91
683 698 6.149308 CCAACAAGTGACTACATATGAAGCAA 59.851 38.462 10.38 0.00 0.00 3.91
684 699 7.308529 CCAACAAGTGACTACATATGAAGCAAA 60.309 37.037 10.38 0.00 0.00 3.68
685 700 7.744087 ACAAGTGACTACATATGAAGCAAAA 57.256 32.000 10.38 0.00 0.00 2.44
686 701 8.340618 ACAAGTGACTACATATGAAGCAAAAT 57.659 30.769 10.38 0.00 0.00 1.82
687 702 8.239314 ACAAGTGACTACATATGAAGCAAAATG 58.761 33.333 10.38 3.10 0.00 2.32
688 703 8.453320 CAAGTGACTACATATGAAGCAAAATGA 58.547 33.333 10.38 0.00 0.00 2.57
689 704 8.206325 AGTGACTACATATGAAGCAAAATGAG 57.794 34.615 10.38 0.00 0.00 2.90
690 705 7.826252 AGTGACTACATATGAAGCAAAATGAGT 59.174 33.333 10.38 0.00 0.00 3.41
691 706 7.907045 GTGACTACATATGAAGCAAAATGAGTG 59.093 37.037 10.38 0.00 0.00 3.51
692 707 7.823799 TGACTACATATGAAGCAAAATGAGTGA 59.176 33.333 10.38 0.00 0.00 3.41
693 708 8.565896 ACTACATATGAAGCAAAATGAGTGAA 57.434 30.769 10.38 0.00 0.00 3.18
694 709 9.182214 ACTACATATGAAGCAAAATGAGTGAAT 57.818 29.630 10.38 0.00 0.00 2.57
695 710 9.661187 CTACATATGAAGCAAAATGAGTGAATC 57.339 33.333 10.38 0.00 0.00 2.52
696 711 8.289939 ACATATGAAGCAAAATGAGTGAATCT 57.710 30.769 10.38 0.00 0.00 2.40
697 712 9.399797 ACATATGAAGCAAAATGAGTGAATCTA 57.600 29.630 10.38 0.00 0.00 1.98
698 713 9.661187 CATATGAAGCAAAATGAGTGAATCTAC 57.339 33.333 0.00 0.00 0.00 2.59
699 714 7.692460 ATGAAGCAAAATGAGTGAATCTACA 57.308 32.000 0.00 0.00 0.00 2.74
700 715 6.902341 TGAAGCAAAATGAGTGAATCTACAC 58.098 36.000 0.00 0.00 40.60 2.90
724 739 9.561270 CACTCTAAATATGTCTACATACATCCG 57.439 37.037 4.98 0.00 41.15 4.18
725 740 9.298250 ACTCTAAATATGTCTACATACATCCGT 57.702 33.333 4.98 0.00 41.15 4.69
741 756 9.653287 CATACATCCGTATGTTATAGTCCATTT 57.347 33.333 0.00 0.00 46.70 2.32
778 793 8.483307 AAAACTTATATTTAGAAACGGAGCGA 57.517 30.769 0.00 0.00 0.00 4.93
779 794 7.460751 AACTTATATTTAGAAACGGAGCGAC 57.539 36.000 0.00 0.00 0.00 5.19
780 795 6.803642 ACTTATATTTAGAAACGGAGCGACT 58.196 36.000 0.00 0.00 0.00 4.18
781 796 7.934457 ACTTATATTTAGAAACGGAGCGACTA 58.066 34.615 0.00 0.00 0.00 2.59
782 797 8.574737 ACTTATATTTAGAAACGGAGCGACTAT 58.425 33.333 0.00 0.00 0.00 2.12
786 801 7.639162 ATTTAGAAACGGAGCGACTATATTG 57.361 36.000 0.00 0.00 0.00 1.90
787 802 4.913335 AGAAACGGAGCGACTATATTGA 57.087 40.909 0.00 0.00 0.00 2.57
788 803 5.455056 AGAAACGGAGCGACTATATTGAT 57.545 39.130 0.00 0.00 0.00 2.57
821 836 8.976986 AAAATGTAGATTCACTCATTTTGCTC 57.023 30.769 17.26 0.00 40.40 4.26
829 844 4.323417 TCACTCATTTTGCTCCGTATGTT 58.677 39.130 0.00 0.00 0.00 2.71
839 857 7.851387 TTTGCTCCGTATGTTGTTCATATTA 57.149 32.000 0.00 0.00 40.54 0.98
841 859 7.851387 TGCTCCGTATGTTGTTCATATTAAA 57.149 32.000 0.00 0.00 40.54 1.52
842 860 8.270080 TGCTCCGTATGTTGTTCATATTAAAA 57.730 30.769 0.00 0.00 40.54 1.52
844 862 9.382244 GCTCCGTATGTTGTTCATATTAAAATC 57.618 33.333 0.00 0.00 40.54 2.17
874 892 9.807386 AAAAGAACTCATATTTAGAAACGAACG 57.193 29.630 0.00 0.00 0.00 3.95
891 909 0.100682 ACGGAGTACTATGCAGCACG 59.899 55.000 0.00 0.00 41.94 5.34
893 911 1.560923 GGAGTACTATGCAGCACGTG 58.439 55.000 12.28 12.28 0.00 4.49
899 917 0.717784 CTATGCAGCACGTGTCACTG 59.282 55.000 18.38 16.39 34.48 3.66
903 921 1.428370 GCAGCACGTGTCACTGTCAA 61.428 55.000 18.38 0.00 33.87 3.18
904 922 0.301687 CAGCACGTGTCACTGTCAAC 59.698 55.000 18.38 0.00 0.00 3.18
912 930 0.304705 GTCACTGTCAACGTGCCAAG 59.695 55.000 0.00 0.00 32.54 3.61
925 943 2.336088 CCAAGCTGCCAACAACCG 59.664 61.111 0.00 0.00 0.00 4.44
977 995 2.734673 GCTTGAAGCGAGGTGAGCG 61.735 63.158 0.00 0.00 40.04 5.03
989 1007 1.369321 GTGAGCGAGGGGATCATCC 59.631 63.158 0.00 0.00 44.00 3.51
1170 1188 8.873215 TTCTAGTTCTTTCTTGTCTGTACTTG 57.127 34.615 0.00 0.00 0.00 3.16
1191 1516 6.765512 ACTTGAGAAAAACTTCTCTTCAGAGG 59.234 38.462 14.23 0.00 45.77 3.69
1223 1621 9.454859 CTGAAATCCTATGTTCTTCCTAGTTTT 57.545 33.333 0.00 0.00 0.00 2.43
1277 2375 1.291272 GCAGGAAAGCTTGCCAAGG 59.709 57.895 26.03 14.97 40.89 3.61
1289 2387 1.774110 TGCCAAGGCTCTGAAAACAA 58.226 45.000 12.96 0.00 42.51 2.83
1291 2389 1.603931 GCCAAGGCTCTGAAAACAAGC 60.604 52.381 3.29 0.00 38.26 4.01
1473 2622 2.583593 GCCTTCCTAGTCGCTGCG 60.584 66.667 17.25 17.25 0.00 5.18
1476 2625 4.143333 TTCCTAGTCGCTGCGCCC 62.143 66.667 18.65 10.29 0.00 6.13
1528 2677 0.671781 CAACTGTCTTCCGGCTCCAG 60.672 60.000 0.00 2.43 0.00 3.86
1560 2709 2.733026 AGCTTCGTTTTCATTTGCATGC 59.267 40.909 11.82 11.82 0.00 4.06
1561 2710 2.475864 GCTTCGTTTTCATTTGCATGCA 59.524 40.909 18.46 18.46 0.00 3.96
1564 2713 3.910648 TCGTTTTCATTTGCATGCATGA 58.089 36.364 30.64 20.23 0.00 3.07
1565 2714 4.304939 TCGTTTTCATTTGCATGCATGAA 58.695 34.783 30.64 25.60 0.00 2.57
1566 2715 4.930405 TCGTTTTCATTTGCATGCATGAAT 59.070 33.333 28.32 20.60 33.66 2.57
1567 2716 5.018869 CGTTTTCATTTGCATGCATGAATG 58.981 37.500 28.32 28.14 33.66 2.67
1570 2719 5.788055 TTCATTTGCATGCATGAATGTTC 57.212 34.783 30.35 11.62 0.00 3.18
1571 2720 5.079689 TCATTTGCATGCATGAATGTTCT 57.920 34.783 30.35 7.04 0.00 3.01
1606 2764 2.806945 TGATGGAGTTGTGGGGAATC 57.193 50.000 0.00 0.00 0.00 2.52
1617 2776 3.235200 TGTGGGGAATCGGAAACAATTT 58.765 40.909 0.00 0.00 0.00 1.82
1618 2777 3.006323 TGTGGGGAATCGGAAACAATTTG 59.994 43.478 0.00 0.00 0.00 2.32
1619 2778 2.564947 TGGGGAATCGGAAACAATTTGG 59.435 45.455 0.78 0.00 0.00 3.28
1671 2861 5.419542 TCCCTGACAAATTATTCTCAGTCG 58.580 41.667 10.04 3.16 0.00 4.18
1673 2863 5.063944 CCCTGACAAATTATTCTCAGTCGTG 59.936 44.000 10.04 0.00 0.00 4.35
1675 2865 4.935205 TGACAAATTATTCTCAGTCGTGGG 59.065 41.667 0.00 0.00 0.00 4.61
1676 2866 4.261801 ACAAATTATTCTCAGTCGTGGGG 58.738 43.478 0.00 0.00 0.00 4.96
1677 2867 4.019681 ACAAATTATTCTCAGTCGTGGGGA 60.020 41.667 0.00 0.00 0.00 4.81
1679 2869 3.887621 TTATTCTCAGTCGTGGGGAAG 57.112 47.619 0.00 0.00 0.00 3.46
1680 2870 1.938585 ATTCTCAGTCGTGGGGAAGA 58.061 50.000 0.00 0.00 0.00 2.87
1682 2872 1.475403 TCTCAGTCGTGGGGAAGATC 58.525 55.000 0.00 0.00 0.00 2.75
1683 2873 1.186200 CTCAGTCGTGGGGAAGATCA 58.814 55.000 0.00 0.00 0.00 2.92
1684 2874 1.759445 CTCAGTCGTGGGGAAGATCAT 59.241 52.381 0.00 0.00 0.00 2.45
1721 3318 6.957525 AGCATTTGGCATCACAATTATGCTAC 60.958 38.462 13.41 0.00 45.69 3.58
1725 3322 4.756084 GCATCACAATTATGCTACTCCC 57.244 45.455 4.71 0.00 45.05 4.30
1726 3323 4.392940 GCATCACAATTATGCTACTCCCT 58.607 43.478 4.71 0.00 45.05 4.20
1727 3324 4.453819 GCATCACAATTATGCTACTCCCTC 59.546 45.833 4.71 0.00 45.05 4.30
1728 3325 5.744300 GCATCACAATTATGCTACTCCCTCT 60.744 44.000 4.71 0.00 45.05 3.69
1729 3326 6.519043 GCATCACAATTATGCTACTCCCTCTA 60.519 42.308 4.71 0.00 45.05 2.43
1730 3327 7.445121 CATCACAATTATGCTACTCCCTCTAA 58.555 38.462 0.00 0.00 0.00 2.10
1731 3328 7.618019 TCACAATTATGCTACTCCCTCTAAT 57.382 36.000 0.00 0.00 0.00 1.73
1732 3329 7.671302 TCACAATTATGCTACTCCCTCTAATC 58.329 38.462 0.00 0.00 0.00 1.75
1733 3330 6.587990 CACAATTATGCTACTCCCTCTAATCG 59.412 42.308 0.00 0.00 0.00 3.34
1734 3331 6.267928 ACAATTATGCTACTCCCTCTAATCGT 59.732 38.462 0.00 0.00 0.00 3.73
1735 3332 7.450634 ACAATTATGCTACTCCCTCTAATCGTA 59.549 37.037 0.00 0.00 0.00 3.43
1736 3333 6.814506 TTATGCTACTCCCTCTAATCGTAC 57.185 41.667 0.00 0.00 0.00 3.67
1737 3334 4.160642 TGCTACTCCCTCTAATCGTACA 57.839 45.455 0.00 0.00 0.00 2.90
1738 3335 4.529897 TGCTACTCCCTCTAATCGTACAA 58.470 43.478 0.00 0.00 0.00 2.41
1739 3336 4.951715 TGCTACTCCCTCTAATCGTACAAA 59.048 41.667 0.00 0.00 0.00 2.83
1740 3337 5.419788 TGCTACTCCCTCTAATCGTACAAAA 59.580 40.000 0.00 0.00 0.00 2.44
1741 3338 6.097839 TGCTACTCCCTCTAATCGTACAAAAT 59.902 38.462 0.00 0.00 0.00 1.82
1742 3339 6.641723 GCTACTCCCTCTAATCGTACAAAATC 59.358 42.308 0.00 0.00 0.00 2.17
1743 3340 6.540438 ACTCCCTCTAATCGTACAAAATCA 57.460 37.500 0.00 0.00 0.00 2.57
1744 3341 6.574350 ACTCCCTCTAATCGTACAAAATCAG 58.426 40.000 0.00 0.00 0.00 2.90
1745 3342 5.357257 TCCCTCTAATCGTACAAAATCAGC 58.643 41.667 0.00 0.00 0.00 4.26
1746 3343 4.209288 CCCTCTAATCGTACAAAATCAGCG 59.791 45.833 0.00 0.00 0.00 5.18
1747 3344 5.041287 CCTCTAATCGTACAAAATCAGCGA 58.959 41.667 0.00 0.00 36.02 4.93
1748 3345 5.051641 CCTCTAATCGTACAAAATCAGCGAC 60.052 44.000 0.00 0.00 34.36 5.19
1749 3346 5.404096 TCTAATCGTACAAAATCAGCGACA 58.596 37.500 0.00 0.00 34.36 4.35
1750 3347 5.865013 TCTAATCGTACAAAATCAGCGACAA 59.135 36.000 0.00 0.00 34.36 3.18
1751 3348 5.545658 AATCGTACAAAATCAGCGACAAT 57.454 34.783 0.00 0.00 34.36 2.71
1752 3349 5.545658 ATCGTACAAAATCAGCGACAATT 57.454 34.783 0.00 0.00 34.36 2.32
1753 3350 6.656314 ATCGTACAAAATCAGCGACAATTA 57.344 33.333 0.00 0.00 34.36 1.40
1754 3351 6.469139 TCGTACAAAATCAGCGACAATTAA 57.531 33.333 0.00 0.00 0.00 1.40
1755 3352 7.067532 TCGTACAAAATCAGCGACAATTAAT 57.932 32.000 0.00 0.00 0.00 1.40
1756 3353 8.187354 TCGTACAAAATCAGCGACAATTAATA 57.813 30.769 0.00 0.00 0.00 0.98
1757 3354 8.822855 TCGTACAAAATCAGCGACAATTAATAT 58.177 29.630 0.00 0.00 0.00 1.28
1758 3355 8.882199 CGTACAAAATCAGCGACAATTAATATG 58.118 33.333 0.00 0.00 0.00 1.78
1759 3356 9.929722 GTACAAAATCAGCGACAATTAATATGA 57.070 29.630 0.00 0.00 0.00 2.15
1763 3360 9.683069 AAAATCAGCGACAATTAATATGAATCC 57.317 29.630 0.00 0.00 0.00 3.01
1764 3361 7.984422 ATCAGCGACAATTAATATGAATCCA 57.016 32.000 0.00 0.00 0.00 3.41
1765 3362 7.800155 TCAGCGACAATTAATATGAATCCAA 57.200 32.000 0.00 0.00 0.00 3.53
1766 3363 7.864686 TCAGCGACAATTAATATGAATCCAAG 58.135 34.615 0.00 0.00 0.00 3.61
1767 3364 7.041167 TCAGCGACAATTAATATGAATCCAAGG 60.041 37.037 0.00 0.00 0.00 3.61
1768 3365 6.207417 AGCGACAATTAATATGAATCCAAGGG 59.793 38.462 0.00 0.00 0.00 3.95
1769 3366 6.206634 GCGACAATTAATATGAATCCAAGGGA 59.793 38.462 0.00 0.00 35.55 4.20
1770 3367 7.584987 CGACAATTAATATGAATCCAAGGGAC 58.415 38.462 0.00 0.00 32.98 4.46
1772 3369 9.793259 GACAATTAATATGAATCCAAGGGACTA 57.207 33.333 0.00 0.00 38.49 2.59
1791 3389 7.237887 AGGGACTAGTTTATTTCCTCTTCAGTT 59.762 37.037 0.00 0.00 36.02 3.16
1792 3390 7.549842 GGGACTAGTTTATTTCCTCTTCAGTTC 59.450 40.741 0.00 0.00 0.00 3.01
1794 3392 9.713713 GACTAGTTTATTTCCTCTTCAGTTCTT 57.286 33.333 0.00 0.00 0.00 2.52
1795 3393 9.495572 ACTAGTTTATTTCCTCTTCAGTTCTTG 57.504 33.333 0.00 0.00 0.00 3.02
1796 3394 9.495572 CTAGTTTATTTCCTCTTCAGTTCTTGT 57.504 33.333 0.00 0.00 0.00 3.16
1798 3396 8.841300 AGTTTATTTCCTCTTCAGTTCTTGTTC 58.159 33.333 0.00 0.00 0.00 3.18
1799 3397 5.931441 ATTTCCTCTTCAGTTCTTGTTCG 57.069 39.130 0.00 0.00 0.00 3.95
1801 3399 2.698797 TCCTCTTCAGTTCTTGTTCGGT 59.301 45.455 0.00 0.00 0.00 4.69
1815 3413 2.841266 TGTTCGGTTAATCCCCTCATCA 59.159 45.455 0.00 0.00 0.00 3.07
1817 3415 1.416401 TCGGTTAATCCCCTCATCAGC 59.584 52.381 0.00 0.00 0.00 4.26
1834 3432 7.104043 TCATCAGCAAATTTAAGAGGATTGG 57.896 36.000 0.00 0.00 0.00 3.16
1837 3435 6.484288 TCAGCAAATTTAAGAGGATTGGAGA 58.516 36.000 0.00 0.00 0.00 3.71
1840 3438 8.906867 CAGCAAATTTAAGAGGATTGGAGAATA 58.093 33.333 0.00 0.00 0.00 1.75
1885 3483 1.570501 CCCTCAATCCCTTCAATCCCA 59.429 52.381 0.00 0.00 0.00 4.37
1902 3500 1.613437 CCCAACCAAATCGAACAAGCT 59.387 47.619 0.00 0.00 0.00 3.74
1907 3505 1.122419 CAAATCGAACAAGCTCGCGC 61.122 55.000 0.00 0.00 38.73 6.86
1908 3506 2.240612 AAATCGAACAAGCTCGCGCC 62.241 55.000 0.00 0.00 38.73 6.53
1913 3529 0.515564 GAACAAGCTCGCGCCTTTAA 59.484 50.000 0.00 0.00 36.60 1.52
1915 3531 0.602905 ACAAGCTCGCGCCTTTAACT 60.603 50.000 0.00 0.00 36.60 2.24
2200 3848 7.810759 ACATTTCATAAACGTTGGTATTGGTTC 59.189 33.333 0.00 0.00 0.00 3.62
2287 3953 2.278857 CGGAGGAGAACGGCATCG 60.279 66.667 0.00 0.00 43.02 3.84
2395 4065 1.076632 ACCGGTGAGAGAGGCTAGG 60.077 63.158 6.12 0.00 0.00 3.02
2408 4091 6.381250 AGAGAGGCTAGGATTTCTCTATGTT 58.619 40.000 1.28 0.00 43.30 2.71
2409 4092 6.493458 AGAGAGGCTAGGATTTCTCTATGTTC 59.507 42.308 1.28 0.00 43.30 3.18
2446 4129 4.820284 ACAGCAAGTAAGCTCTGTTTTC 57.180 40.909 0.00 0.00 44.54 2.29
2503 4189 1.555075 TGGTTGTCTGCCTGTCCTATC 59.445 52.381 0.00 0.00 0.00 2.08
2647 4333 1.133450 TCCTCCTCGGGAAGATACCTG 60.133 57.143 0.00 0.00 37.63 4.00
2671 4357 2.013807 CAGTCACAACACCACCGTG 58.986 57.895 0.00 0.00 46.11 4.94
2724 4410 7.875327 AGTACCCACAATACAATATGAAACC 57.125 36.000 0.00 0.00 0.00 3.27
2761 4447 1.208293 CCTCTGGCTGAAGAACTACCC 59.792 57.143 0.00 0.00 0.00 3.69
2777 4467 0.392461 ACCCGATAAGCGTGCATGTT 60.392 50.000 7.93 0.00 38.67 2.71
2950 4669 1.445582 CGAGTACGGCAGAACCACC 60.446 63.158 0.00 0.00 39.03 4.61
2977 4696 3.743521 TCTGCCCTATTGATATGTGTGC 58.256 45.455 0.00 0.00 0.00 4.57
2982 4709 4.504864 GCCCTATTGATATGTGTGCCAGTA 60.505 45.833 0.00 0.00 0.00 2.74
2989 4716 5.744171 TGATATGTGTGCCAGTAGTTCATT 58.256 37.500 0.00 0.00 0.00 2.57
3090 4817 3.711704 TCTTTCCTCCCTCGCATTTATCT 59.288 43.478 0.00 0.00 0.00 1.98
3101 4828 6.035435 CCCTCGCATTTATCTATTGAGAATCG 59.965 42.308 0.00 0.00 38.61 3.34
3106 4833 7.359514 CGCATTTATCTATTGAGAATCGCTTCA 60.360 37.037 1.35 0.00 38.61 3.02
3114 4841 8.204160 TCTATTGAGAATCGCTTCATTTTCCTA 58.796 33.333 1.35 0.00 38.61 2.94
3118 4845 2.038387 TCGCTTCATTTTCCTAGCCC 57.962 50.000 0.00 0.00 0.00 5.19
3191 4926 8.908903 AGTAGATTTTGGTTTGTTGTTGTCATA 58.091 29.630 0.00 0.00 0.00 2.15
3199 4934 5.215160 GTTTGTTGTTGTCATAAGAGCAGG 58.785 41.667 0.00 0.00 0.00 4.85
3206 4941 2.234661 TGTCATAAGAGCAGGTGAGTGG 59.765 50.000 0.00 0.00 0.00 4.00
3217 4952 3.181485 GCAGGTGAGTGGTATCTAGTGAC 60.181 52.174 0.00 0.00 0.00 3.67
3218 4953 3.381908 CAGGTGAGTGGTATCTAGTGACC 59.618 52.174 8.40 8.40 36.17 4.02
3219 4954 3.011369 AGGTGAGTGGTATCTAGTGACCA 59.989 47.826 12.67 12.67 43.55 4.02
3227 4962 6.235231 TGGTATCTAGTGACCATCTTTTCC 57.765 41.667 12.67 0.00 40.87 3.13
3228 4963 5.964477 TGGTATCTAGTGACCATCTTTTCCT 59.036 40.000 12.67 0.00 40.87 3.36
3229 4964 6.098409 TGGTATCTAGTGACCATCTTTTCCTC 59.902 42.308 12.67 0.00 40.87 3.71
3230 4965 5.622346 ATCTAGTGACCATCTTTTCCTCC 57.378 43.478 0.00 0.00 0.00 4.30
3231 4966 4.689062 TCTAGTGACCATCTTTTCCTCCT 58.311 43.478 0.00 0.00 0.00 3.69
3232 4967 3.990959 AGTGACCATCTTTTCCTCCTC 57.009 47.619 0.00 0.00 0.00 3.71
3233 4968 2.573915 AGTGACCATCTTTTCCTCCTCC 59.426 50.000 0.00 0.00 0.00 4.30
3234 4969 2.305927 GTGACCATCTTTTCCTCCTCCA 59.694 50.000 0.00 0.00 0.00 3.86
3235 4970 2.573462 TGACCATCTTTTCCTCCTCCAG 59.427 50.000 0.00 0.00 0.00 3.86
3236 4971 2.840651 GACCATCTTTTCCTCCTCCAGA 59.159 50.000 0.00 0.00 0.00 3.86
3237 4972 3.457749 GACCATCTTTTCCTCCTCCAGAT 59.542 47.826 0.00 0.00 0.00 2.90
3238 4973 3.201708 ACCATCTTTTCCTCCTCCAGATG 59.798 47.826 0.00 0.00 40.34 2.90
3239 4974 3.212685 CATCTTTTCCTCCTCCAGATGC 58.787 50.000 0.00 0.00 35.70 3.91
3240 4975 1.561542 TCTTTTCCTCCTCCAGATGCC 59.438 52.381 0.00 0.00 0.00 4.40
3241 4976 1.563410 CTTTTCCTCCTCCAGATGCCT 59.437 52.381 0.00 0.00 0.00 4.75
3242 4977 1.673767 TTTCCTCCTCCAGATGCCTT 58.326 50.000 0.00 0.00 0.00 4.35
3243 4978 1.673767 TTCCTCCTCCAGATGCCTTT 58.326 50.000 0.00 0.00 0.00 3.11
3244 4979 1.673767 TCCTCCTCCAGATGCCTTTT 58.326 50.000 0.00 0.00 0.00 2.27
3245 4980 1.995542 TCCTCCTCCAGATGCCTTTTT 59.004 47.619 0.00 0.00 0.00 1.94
3246 4981 2.097825 CCTCCTCCAGATGCCTTTTTG 58.902 52.381 0.00 0.00 0.00 2.44
3247 4982 1.475682 CTCCTCCAGATGCCTTTTTGC 59.524 52.381 0.00 0.00 0.00 3.68
3248 4983 1.076024 TCCTCCAGATGCCTTTTTGCT 59.924 47.619 0.00 0.00 0.00 3.91
3249 4984 2.308570 TCCTCCAGATGCCTTTTTGCTA 59.691 45.455 0.00 0.00 0.00 3.49
3250 4985 2.424956 CCTCCAGATGCCTTTTTGCTAC 59.575 50.000 0.00 0.00 0.00 3.58
3251 4986 2.424956 CTCCAGATGCCTTTTTGCTACC 59.575 50.000 0.00 0.00 0.00 3.18
3252 4987 2.041620 TCCAGATGCCTTTTTGCTACCT 59.958 45.455 0.00 0.00 0.00 3.08
3253 4988 2.424956 CCAGATGCCTTTTTGCTACCTC 59.575 50.000 0.00 0.00 0.00 3.85
3254 4989 3.350833 CAGATGCCTTTTTGCTACCTCT 58.649 45.455 0.00 0.00 0.00 3.69
3255 4990 3.128242 CAGATGCCTTTTTGCTACCTCTG 59.872 47.826 0.00 0.00 0.00 3.35
3256 4991 1.247567 TGCCTTTTTGCTACCTCTGC 58.752 50.000 0.00 0.00 0.00 4.26
3257 4992 0.169009 GCCTTTTTGCTACCTCTGCG 59.831 55.000 0.00 0.00 0.00 5.18
3258 4993 0.804989 CCTTTTTGCTACCTCTGCGG 59.195 55.000 0.00 0.00 39.35 5.69
3260 4995 2.614481 CCTTTTTGCTACCTCTGCGGTA 60.614 50.000 0.00 0.00 46.73 4.02
3266 5001 3.202548 TACCTCTGCGGTAGAAGGG 57.797 57.895 13.15 7.79 46.73 3.95
3267 5002 3.221222 CCTCTGCGGTAGAAGGGG 58.779 66.667 0.00 0.00 37.31 4.79
3268 5003 4.356979 CTCTGCGGTAGAAGGGGA 57.643 61.111 0.00 0.00 34.32 4.81
3269 5004 2.119886 CTCTGCGGTAGAAGGGGAG 58.880 63.158 0.00 0.00 34.32 4.30
3270 5005 0.684805 CTCTGCGGTAGAAGGGGAGT 60.685 60.000 0.00 0.00 34.32 3.85
3271 5006 0.252103 TCTGCGGTAGAAGGGGAGTT 60.252 55.000 0.00 0.00 30.84 3.01
3272 5007 0.175989 CTGCGGTAGAAGGGGAGTTC 59.824 60.000 0.00 0.00 0.00 3.01
3273 5008 0.543410 TGCGGTAGAAGGGGAGTTCA 60.543 55.000 0.00 0.00 0.00 3.18
3274 5009 0.611714 GCGGTAGAAGGGGAGTTCAA 59.388 55.000 0.00 0.00 0.00 2.69
3275 5010 1.405661 GCGGTAGAAGGGGAGTTCAAG 60.406 57.143 0.00 0.00 0.00 3.02
3276 5011 1.207329 CGGTAGAAGGGGAGTTCAAGG 59.793 57.143 0.00 0.00 0.00 3.61
3277 5012 2.267192 GGTAGAAGGGGAGTTCAAGGT 58.733 52.381 0.00 0.00 0.00 3.50
3278 5013 2.236644 GGTAGAAGGGGAGTTCAAGGTC 59.763 54.545 0.00 0.00 0.00 3.85
3279 5014 1.363246 AGAAGGGGAGTTCAAGGTCC 58.637 55.000 0.00 0.00 0.00 4.46
3280 5015 0.036294 GAAGGGGAGTTCAAGGTCCG 60.036 60.000 0.00 0.00 33.13 4.79
3281 5016 1.489560 AAGGGGAGTTCAAGGTCCGG 61.490 60.000 0.00 0.00 33.13 5.14
3282 5017 2.046217 GGGAGTTCAAGGTCCGGC 60.046 66.667 0.00 0.00 33.13 6.13
3283 5018 2.434359 GGAGTTCAAGGTCCGGCG 60.434 66.667 0.00 0.00 0.00 6.46
3284 5019 2.434359 GAGTTCAAGGTCCGGCGG 60.434 66.667 22.51 22.51 0.00 6.13
3285 5020 3.952628 GAGTTCAAGGTCCGGCGGG 62.953 68.421 27.98 9.72 0.00 6.13
3297 5032 3.615709 GGCGGGCTTTGGTTGCTT 61.616 61.111 0.00 0.00 0.00 3.91
3298 5033 2.049156 GCGGGCTTTGGTTGCTTC 60.049 61.111 0.00 0.00 0.00 3.86
3299 5034 2.855514 GCGGGCTTTGGTTGCTTCA 61.856 57.895 0.00 0.00 0.00 3.02
3300 5035 1.286880 CGGGCTTTGGTTGCTTCAG 59.713 57.895 0.00 0.00 0.00 3.02
3301 5036 1.172180 CGGGCTTTGGTTGCTTCAGA 61.172 55.000 0.00 0.00 0.00 3.27
3302 5037 1.260544 GGGCTTTGGTTGCTTCAGAT 58.739 50.000 0.00 0.00 0.00 2.90
3303 5038 1.203287 GGGCTTTGGTTGCTTCAGATC 59.797 52.381 0.00 0.00 0.00 2.75
3304 5039 2.165998 GGCTTTGGTTGCTTCAGATCT 58.834 47.619 0.00 0.00 0.00 2.75
3305 5040 3.347216 GGCTTTGGTTGCTTCAGATCTA 58.653 45.455 0.00 0.00 0.00 1.98
3306 5041 3.376546 GGCTTTGGTTGCTTCAGATCTAG 59.623 47.826 0.00 0.00 0.00 2.43
3307 5042 4.256920 GCTTTGGTTGCTTCAGATCTAGA 58.743 43.478 0.00 0.00 0.00 2.43
3308 5043 4.332268 GCTTTGGTTGCTTCAGATCTAGAG 59.668 45.833 0.00 0.00 0.00 2.43
3309 5044 3.533606 TGGTTGCTTCAGATCTAGAGC 57.466 47.619 18.05 18.05 0.00 4.09
3310 5045 3.102972 TGGTTGCTTCAGATCTAGAGCT 58.897 45.455 22.68 4.23 0.00 4.09
3311 5046 3.517100 TGGTTGCTTCAGATCTAGAGCTT 59.483 43.478 22.68 0.00 0.00 3.74
3312 5047 4.711846 TGGTTGCTTCAGATCTAGAGCTTA 59.288 41.667 22.68 0.00 0.00 3.09
3313 5048 5.163468 TGGTTGCTTCAGATCTAGAGCTTAG 60.163 44.000 22.68 9.87 0.00 2.18
3314 5049 5.068460 GGTTGCTTCAGATCTAGAGCTTAGA 59.932 44.000 22.68 0.37 0.00 2.10
3315 5050 6.208644 GTTGCTTCAGATCTAGAGCTTAGAG 58.791 44.000 22.68 7.62 0.00 2.43
3316 5051 4.826733 TGCTTCAGATCTAGAGCTTAGAGG 59.173 45.833 22.68 5.49 0.00 3.69
3317 5052 4.218417 GCTTCAGATCTAGAGCTTAGAGGG 59.782 50.000 8.04 0.00 0.00 4.30
3318 5053 3.761897 TCAGATCTAGAGCTTAGAGGGC 58.238 50.000 8.04 0.00 0.00 5.19
3319 5054 2.825532 CAGATCTAGAGCTTAGAGGGCC 59.174 54.545 8.04 0.00 0.00 5.80
3320 5055 2.448961 AGATCTAGAGCTTAGAGGGCCA 59.551 50.000 4.23 0.00 0.00 5.36
3321 5056 3.077391 AGATCTAGAGCTTAGAGGGCCAT 59.923 47.826 4.23 0.00 0.00 4.40
3322 5057 2.603021 TCTAGAGCTTAGAGGGCCATG 58.397 52.381 6.18 0.00 0.00 3.66
3323 5058 2.177888 TCTAGAGCTTAGAGGGCCATGA 59.822 50.000 6.18 0.00 0.00 3.07
3324 5059 1.127343 AGAGCTTAGAGGGCCATGAC 58.873 55.000 6.18 0.00 0.00 3.06
3325 5060 0.249657 GAGCTTAGAGGGCCATGACG 60.250 60.000 6.18 0.00 0.00 4.35
3326 5061 1.889573 GCTTAGAGGGCCATGACGC 60.890 63.158 6.18 0.00 0.00 5.19
3327 5062 1.826024 CTTAGAGGGCCATGACGCT 59.174 57.895 6.18 0.00 35.20 5.07
3328 5063 0.249657 CTTAGAGGGCCATGACGCTC 60.250 60.000 16.82 16.82 46.86 5.03
3332 5067 4.221422 GGGCCATGACGCTCGCTA 62.221 66.667 4.39 0.00 0.00 4.26
3333 5068 2.029666 GGCCATGACGCTCGCTAT 59.970 61.111 0.00 0.00 0.00 2.97
3334 5069 2.313172 GGCCATGACGCTCGCTATG 61.313 63.158 0.00 0.00 0.00 2.23
3335 5070 1.592669 GCCATGACGCTCGCTATGT 60.593 57.895 0.00 0.00 0.00 2.29
3336 5071 1.154205 GCCATGACGCTCGCTATGTT 61.154 55.000 0.00 0.00 0.00 2.71
3337 5072 0.578683 CCATGACGCTCGCTATGTTG 59.421 55.000 0.00 0.00 0.00 3.33
3338 5073 1.559831 CATGACGCTCGCTATGTTGA 58.440 50.000 0.00 0.00 0.00 3.18
3339 5074 2.130395 CATGACGCTCGCTATGTTGAT 58.870 47.619 0.00 0.00 0.00 2.57
3340 5075 2.293677 TGACGCTCGCTATGTTGATT 57.706 45.000 0.00 0.00 0.00 2.57
3341 5076 2.193447 TGACGCTCGCTATGTTGATTC 58.807 47.619 0.00 0.00 0.00 2.52
3342 5077 2.159240 TGACGCTCGCTATGTTGATTCT 60.159 45.455 0.00 0.00 0.00 2.40
3343 5078 2.860735 GACGCTCGCTATGTTGATTCTT 59.139 45.455 0.00 0.00 0.00 2.52
3344 5079 2.604914 ACGCTCGCTATGTTGATTCTTG 59.395 45.455 0.00 0.00 0.00 3.02
3345 5080 2.598439 CGCTCGCTATGTTGATTCTTGC 60.598 50.000 0.00 0.00 0.00 4.01
3346 5081 2.286654 GCTCGCTATGTTGATTCTTGCC 60.287 50.000 0.00 0.00 0.00 4.52
3347 5082 3.201290 CTCGCTATGTTGATTCTTGCCT 58.799 45.455 0.00 0.00 0.00 4.75
3348 5083 3.609853 TCGCTATGTTGATTCTTGCCTT 58.390 40.909 0.00 0.00 0.00 4.35
3349 5084 3.623060 TCGCTATGTTGATTCTTGCCTTC 59.377 43.478 0.00 0.00 0.00 3.46
3350 5085 3.242870 CGCTATGTTGATTCTTGCCTTCC 60.243 47.826 0.00 0.00 0.00 3.46
3351 5086 3.242870 GCTATGTTGATTCTTGCCTTCCG 60.243 47.826 0.00 0.00 0.00 4.30
3352 5087 0.881118 TGTTGATTCTTGCCTTCCGC 59.119 50.000 0.00 0.00 38.31 5.54
3353 5088 0.171231 GTTGATTCTTGCCTTCCGCC 59.829 55.000 0.00 0.00 36.24 6.13
3354 5089 1.305219 TTGATTCTTGCCTTCCGCCG 61.305 55.000 0.00 0.00 36.24 6.46
3355 5090 1.449601 GATTCTTGCCTTCCGCCGA 60.450 57.895 0.00 0.00 36.24 5.54
3356 5091 1.432270 GATTCTTGCCTTCCGCCGAG 61.432 60.000 0.00 0.00 36.24 4.63
3357 5092 4.760047 TCTTGCCTTCCGCCGAGC 62.760 66.667 0.00 0.00 36.24 5.03
3358 5093 4.767255 CTTGCCTTCCGCCGAGCT 62.767 66.667 0.00 0.00 36.24 4.09
3359 5094 4.329545 TTGCCTTCCGCCGAGCTT 62.330 61.111 0.00 0.00 36.24 3.74
3360 5095 3.842925 TTGCCTTCCGCCGAGCTTT 62.843 57.895 0.00 0.00 36.24 3.51
3361 5096 3.500642 GCCTTCCGCCGAGCTTTC 61.501 66.667 0.00 0.00 0.00 2.62
3362 5097 2.047274 CCTTCCGCCGAGCTTTCA 60.047 61.111 0.00 0.00 0.00 2.69
3363 5098 1.450312 CCTTCCGCCGAGCTTTCAT 60.450 57.895 0.00 0.00 0.00 2.57
3364 5099 1.026718 CCTTCCGCCGAGCTTTCATT 61.027 55.000 0.00 0.00 0.00 2.57
3365 5100 0.097674 CTTCCGCCGAGCTTTCATTG 59.902 55.000 0.00 0.00 0.00 2.82
3366 5101 0.605319 TTCCGCCGAGCTTTCATTGT 60.605 50.000 0.00 0.00 0.00 2.71
3367 5102 0.605319 TCCGCCGAGCTTTCATTGTT 60.605 50.000 0.00 0.00 0.00 2.83
3368 5103 0.240945 CCGCCGAGCTTTCATTGTTT 59.759 50.000 0.00 0.00 0.00 2.83
3369 5104 1.330306 CGCCGAGCTTTCATTGTTTG 58.670 50.000 0.00 0.00 0.00 2.93
3370 5105 1.701704 GCCGAGCTTTCATTGTTTGG 58.298 50.000 0.00 0.00 0.00 3.28
3371 5106 1.701704 CCGAGCTTTCATTGTTTGGC 58.298 50.000 0.00 0.00 0.00 4.52
3372 5107 1.669795 CCGAGCTTTCATTGTTTGGCC 60.670 52.381 0.00 0.00 0.00 5.36
3373 5108 1.270550 CGAGCTTTCATTGTTTGGCCT 59.729 47.619 3.32 0.00 0.00 5.19
3374 5109 2.288395 CGAGCTTTCATTGTTTGGCCTT 60.288 45.455 3.32 0.00 0.00 4.35
3375 5110 3.320626 GAGCTTTCATTGTTTGGCCTTC 58.679 45.455 3.32 0.00 0.00 3.46
3376 5111 2.699846 AGCTTTCATTGTTTGGCCTTCA 59.300 40.909 3.32 0.00 0.00 3.02
3377 5112 2.802247 GCTTTCATTGTTTGGCCTTCAC 59.198 45.455 3.32 0.00 0.00 3.18
3378 5113 3.740764 GCTTTCATTGTTTGGCCTTCACA 60.741 43.478 3.32 0.52 0.00 3.58
3379 5114 4.634199 CTTTCATTGTTTGGCCTTCACAT 58.366 39.130 3.32 0.00 0.00 3.21
3380 5115 3.663995 TCATTGTTTGGCCTTCACATG 57.336 42.857 3.32 1.17 0.00 3.21
3381 5116 2.299582 TCATTGTTTGGCCTTCACATGG 59.700 45.455 3.32 0.00 0.00 3.66
3382 5117 2.079170 TTGTTTGGCCTTCACATGGA 57.921 45.000 3.32 0.00 0.00 3.41
3383 5118 2.307496 TGTTTGGCCTTCACATGGAT 57.693 45.000 3.32 0.00 0.00 3.41
3384 5119 1.894466 TGTTTGGCCTTCACATGGATG 59.106 47.619 3.32 0.00 0.00 3.51
3385 5120 2.170166 GTTTGGCCTTCACATGGATGA 58.830 47.619 3.32 0.00 0.00 2.92
3386 5121 1.838112 TTGGCCTTCACATGGATGAC 58.162 50.000 3.32 0.00 0.00 3.06
3387 5122 0.697658 TGGCCTTCACATGGATGACA 59.302 50.000 3.32 0.00 0.00 3.58
3388 5123 1.285667 TGGCCTTCACATGGATGACAT 59.714 47.619 3.32 0.00 41.57 3.06
3389 5124 2.509131 TGGCCTTCACATGGATGACATA 59.491 45.455 3.32 0.00 37.84 2.29
3390 5125 3.138839 TGGCCTTCACATGGATGACATAT 59.861 43.478 3.32 0.00 37.84 1.78
3391 5126 4.147321 GGCCTTCACATGGATGACATATT 58.853 43.478 0.00 0.00 37.84 1.28
3392 5127 5.163109 TGGCCTTCACATGGATGACATATTA 60.163 40.000 3.32 0.00 37.84 0.98
3393 5128 5.769662 GGCCTTCACATGGATGACATATTAA 59.230 40.000 0.00 0.00 37.84 1.40
3394 5129 6.435277 GGCCTTCACATGGATGACATATTAAT 59.565 38.462 0.00 0.00 37.84 1.40
3395 5130 7.039504 GGCCTTCACATGGATGACATATTAATT 60.040 37.037 0.00 0.00 37.84 1.40
3396 5131 8.362639 GCCTTCACATGGATGACATATTAATTT 58.637 33.333 0.00 0.00 37.84 1.82
3415 5150 2.303163 TTTGTATACATCCGTGCGCT 57.697 45.000 9.73 0.00 0.00 5.92
3421 5156 3.878086 ATACATCCGTGCGCTATTTTG 57.122 42.857 9.73 3.73 0.00 2.44
3429 5164 0.039035 TGCGCTATTTTGGGGGTCTT 59.961 50.000 9.73 0.00 0.00 3.01
3433 5168 2.815158 GCTATTTTGGGGGTCTTTGGA 58.185 47.619 0.00 0.00 0.00 3.53
3485 5220 2.301870 ACCTCGACCTCATTAGTTTGCA 59.698 45.455 0.00 0.00 0.00 4.08
3491 5226 4.260990 CGACCTCATTAGTTTGCAACAACA 60.261 41.667 0.00 0.00 0.00 3.33
3510 5245 2.307686 ACATGGGGTGGTTCGTATTCTT 59.692 45.455 0.00 0.00 0.00 2.52
3525 5261 4.026804 CGTATTCTTGTGGCTATGACGAAC 60.027 45.833 0.00 0.00 0.00 3.95
3546 7120 3.319122 ACACTCAGATTTTGGCAAAGGAC 59.681 43.478 13.04 8.57 0.00 3.85
3562 7136 0.541863 GGACAAGGATGATGTCGGGT 59.458 55.000 1.07 0.00 46.41 5.28
3573 7147 2.659244 GTCGGGTCGTTCGTTGCA 60.659 61.111 0.00 0.00 0.00 4.08
3575 7149 1.952133 TCGGGTCGTTCGTTGCAAG 60.952 57.895 0.00 0.00 0.00 4.01
3580 7154 1.673626 GGTCGTTCGTTGCAAGGGATA 60.674 52.381 18.38 0.64 0.00 2.59
3583 7157 2.093921 TCGTTCGTTGCAAGGGATATGA 60.094 45.455 18.38 11.87 0.00 2.15
3692 7527 3.319405 AGACGCAAGGGTGATGATACTAG 59.681 47.826 0.00 0.00 46.39 2.57
3695 7581 2.035961 GCAAGGGTGATGATACTAGCGA 59.964 50.000 0.00 0.00 0.00 4.93
3794 7763 2.119801 AGTGCTGCTCCTACAAATGG 57.880 50.000 0.00 0.00 0.00 3.16
3800 7769 1.009829 GCTCCTACAAATGGCAGTCG 58.990 55.000 0.00 0.00 0.00 4.18
3906 8848 2.190313 GGCATGGAGATCGCCACA 59.810 61.111 21.32 0.00 45.52 4.17
3921 8864 2.479730 CGCCACAGTACTTCGAGCTAAT 60.480 50.000 0.00 0.00 0.00 1.73
3927 8870 4.219944 ACAGTACTTCGAGCTAATTCCACA 59.780 41.667 0.00 0.00 0.00 4.17
3952 9116 3.123621 GCGTGGTTGTCTTGAACTATCTG 59.876 47.826 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 137 1.862827 GCGTTTGACTACTTCGTGGTT 59.137 47.619 0.00 0.00 0.00 3.67
275 285 3.244561 ACATCCTCTTGACGTTGACCATT 60.245 43.478 0.00 0.00 0.00 3.16
276 286 2.303022 ACATCCTCTTGACGTTGACCAT 59.697 45.455 0.00 0.00 0.00 3.55
312 322 1.621814 AGTAAACTCAACCCGCTGCTA 59.378 47.619 0.00 0.00 0.00 3.49
316 326 3.181468 GCCTATAGTAAACTCAACCCGCT 60.181 47.826 0.00 0.00 0.00 5.52
317 327 3.129109 GCCTATAGTAAACTCAACCCGC 58.871 50.000 0.00 0.00 0.00 6.13
318 328 4.117685 GTGCCTATAGTAAACTCAACCCG 58.882 47.826 0.00 0.00 0.00 5.28
320 330 5.002464 TCGTGCCTATAGTAAACTCAACC 57.998 43.478 0.00 0.00 0.00 3.77
321 331 7.919621 ACTTATCGTGCCTATAGTAAACTCAAC 59.080 37.037 0.00 0.00 0.00 3.18
322 332 8.004087 ACTTATCGTGCCTATAGTAAACTCAA 57.996 34.615 0.00 0.00 0.00 3.02
323 333 7.578310 ACTTATCGTGCCTATAGTAAACTCA 57.422 36.000 0.00 0.00 0.00 3.41
332 347 4.775780 AGCCCATTACTTATCGTGCCTATA 59.224 41.667 0.00 0.00 0.00 1.31
333 348 3.583086 AGCCCATTACTTATCGTGCCTAT 59.417 43.478 0.00 0.00 0.00 2.57
399 414 3.289076 GTTTGCTTAGTCGTTGTTCTGC 58.711 45.455 0.00 0.00 0.00 4.26
401 416 3.537580 TGGTTTGCTTAGTCGTTGTTCT 58.462 40.909 0.00 0.00 0.00 3.01
409 424 7.448748 TCCTAAAAAGATGGTTTGCTTAGTC 57.551 36.000 0.00 0.00 0.00 2.59
413 428 5.070313 TGCTTCCTAAAAAGATGGTTTGCTT 59.930 36.000 0.00 0.00 0.00 3.91
423 438 4.098807 GGTGTGGTTTGCTTCCTAAAAAGA 59.901 41.667 0.00 0.00 0.00 2.52
433 448 6.245408 TCTATGATAAAGGTGTGGTTTGCTT 58.755 36.000 0.00 0.00 0.00 3.91
441 456 8.687242 TGTCTACTTCTCTATGATAAAGGTGTG 58.313 37.037 0.00 0.00 0.00 3.82
442 457 8.688151 GTGTCTACTTCTCTATGATAAAGGTGT 58.312 37.037 0.00 0.00 0.00 4.16
491 506 3.243334 TGCAGATCTGAGCTATCGTTCAG 60.243 47.826 27.04 4.90 46.27 3.02
546 561 8.798402 AGGAATGGAGAGAGTAATAAACGATAG 58.202 37.037 0.00 0.00 46.19 2.08
547 562 8.707796 AGGAATGGAGAGAGTAATAAACGATA 57.292 34.615 0.00 0.00 0.00 2.92
548 563 7.604657 AGGAATGGAGAGAGTAATAAACGAT 57.395 36.000 0.00 0.00 0.00 3.73
641 656 9.586435 CACTTGTTGGAATCTTTAAAAAGACTT 57.414 29.630 7.29 4.18 46.80 3.01
642 657 8.966868 TCACTTGTTGGAATCTTTAAAAAGACT 58.033 29.630 7.29 0.00 46.80 3.24
643 658 9.020813 GTCACTTGTTGGAATCTTTAAAAAGAC 57.979 33.333 7.29 0.00 46.80 3.01
647 662 9.179909 TGTAGTCACTTGTTGGAATCTTTAAAA 57.820 29.630 0.00 0.00 0.00 1.52
648 663 8.740123 TGTAGTCACTTGTTGGAATCTTTAAA 57.260 30.769 0.00 0.00 0.00 1.52
649 664 8.918202 ATGTAGTCACTTGTTGGAATCTTTAA 57.082 30.769 0.00 0.00 0.00 1.52
651 666 8.950210 CATATGTAGTCACTTGTTGGAATCTTT 58.050 33.333 0.00 0.00 0.00 2.52
652 667 8.321353 TCATATGTAGTCACTTGTTGGAATCTT 58.679 33.333 1.90 0.00 0.00 2.40
653 668 7.851228 TCATATGTAGTCACTTGTTGGAATCT 58.149 34.615 1.90 0.00 0.00 2.40
654 669 8.492673 TTCATATGTAGTCACTTGTTGGAATC 57.507 34.615 1.90 0.00 0.00 2.52
655 670 7.066284 GCTTCATATGTAGTCACTTGTTGGAAT 59.934 37.037 10.61 0.00 0.00 3.01
656 671 6.371548 GCTTCATATGTAGTCACTTGTTGGAA 59.628 38.462 10.61 0.00 0.00 3.53
657 672 5.874810 GCTTCATATGTAGTCACTTGTTGGA 59.125 40.000 10.61 0.00 0.00 3.53
658 673 5.643348 TGCTTCATATGTAGTCACTTGTTGG 59.357 40.000 10.61 0.00 0.00 3.77
659 674 6.726258 TGCTTCATATGTAGTCACTTGTTG 57.274 37.500 10.61 0.00 0.00 3.33
660 675 7.744087 TTTGCTTCATATGTAGTCACTTGTT 57.256 32.000 10.61 0.00 0.00 2.83
661 676 7.744087 TTTTGCTTCATATGTAGTCACTTGT 57.256 32.000 10.61 0.00 0.00 3.16
662 677 8.453320 TCATTTTGCTTCATATGTAGTCACTTG 58.547 33.333 10.61 4.90 0.00 3.16
663 678 8.565896 TCATTTTGCTTCATATGTAGTCACTT 57.434 30.769 10.61 0.00 0.00 3.16
664 679 7.826252 ACTCATTTTGCTTCATATGTAGTCACT 59.174 33.333 10.61 0.00 0.00 3.41
665 680 7.907045 CACTCATTTTGCTTCATATGTAGTCAC 59.093 37.037 10.61 0.00 0.00 3.67
666 681 7.823799 TCACTCATTTTGCTTCATATGTAGTCA 59.176 33.333 10.61 6.75 0.00 3.41
667 682 8.201554 TCACTCATTTTGCTTCATATGTAGTC 57.798 34.615 10.61 4.54 0.00 2.59
668 683 8.565896 TTCACTCATTTTGCTTCATATGTAGT 57.434 30.769 10.61 0.00 0.00 2.73
669 684 9.661187 GATTCACTCATTTTGCTTCATATGTAG 57.339 33.333 5.04 5.04 0.00 2.74
670 685 9.399797 AGATTCACTCATTTTGCTTCATATGTA 57.600 29.630 1.90 0.00 0.00 2.29
671 686 8.289939 AGATTCACTCATTTTGCTTCATATGT 57.710 30.769 1.90 0.00 0.00 2.29
672 687 9.661187 GTAGATTCACTCATTTTGCTTCATATG 57.339 33.333 0.00 0.00 0.00 1.78
673 688 9.399797 TGTAGATTCACTCATTTTGCTTCATAT 57.600 29.630 0.00 0.00 0.00 1.78
674 689 8.668353 GTGTAGATTCACTCATTTTGCTTCATA 58.332 33.333 0.00 0.00 35.68 2.15
675 690 7.392673 AGTGTAGATTCACTCATTTTGCTTCAT 59.607 33.333 0.00 0.00 44.07 2.57
676 691 6.712095 AGTGTAGATTCACTCATTTTGCTTCA 59.288 34.615 0.00 0.00 44.07 3.02
677 692 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
698 713 9.561270 CGGATGTATGTAGACATATTTAGAGTG 57.439 37.037 5.69 0.00 40.18 3.51
699 714 9.298250 ACGGATGTATGTAGACATATTTAGAGT 57.702 33.333 5.69 1.27 40.18 3.24
752 767 8.938906 TCGCTCCGTTTCTAAATATAAGTTTTT 58.061 29.630 0.00 0.00 0.00 1.94
753 768 8.385858 GTCGCTCCGTTTCTAAATATAAGTTTT 58.614 33.333 0.00 0.00 0.00 2.43
754 769 7.763071 AGTCGCTCCGTTTCTAAATATAAGTTT 59.237 33.333 0.00 0.00 0.00 2.66
755 770 7.263496 AGTCGCTCCGTTTCTAAATATAAGTT 58.737 34.615 0.00 0.00 0.00 2.66
756 771 6.803642 AGTCGCTCCGTTTCTAAATATAAGT 58.196 36.000 0.00 0.00 0.00 2.24
757 772 8.967552 ATAGTCGCTCCGTTTCTAAATATAAG 57.032 34.615 0.00 0.00 0.00 1.73
760 775 9.355215 CAATATAGTCGCTCCGTTTCTAAATAT 57.645 33.333 0.00 0.00 0.00 1.28
761 776 8.570488 TCAATATAGTCGCTCCGTTTCTAAATA 58.430 33.333 0.00 0.00 0.00 1.40
762 777 7.431249 TCAATATAGTCGCTCCGTTTCTAAAT 58.569 34.615 0.00 0.00 0.00 1.40
763 778 6.798482 TCAATATAGTCGCTCCGTTTCTAAA 58.202 36.000 0.00 0.00 0.00 1.85
764 779 6.381481 TCAATATAGTCGCTCCGTTTCTAA 57.619 37.500 0.00 0.00 0.00 2.10
765 780 6.570672 ATCAATATAGTCGCTCCGTTTCTA 57.429 37.500 0.00 0.00 0.00 2.10
766 781 4.913335 TCAATATAGTCGCTCCGTTTCT 57.087 40.909 0.00 0.00 0.00 2.52
767 782 9.517609 AATATATCAATATAGTCGCTCCGTTTC 57.482 33.333 0.00 0.00 0.00 2.78
797 812 7.542025 GGAGCAAAATGAGTGAATCTACATTT 58.458 34.615 0.00 0.00 42.25 2.32
801 816 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
812 827 4.793071 TGAACAACATACGGAGCAAAATG 58.207 39.130 0.00 0.00 0.00 2.32
848 866 9.807386 CGTTCGTTTCTAAATATGAGTTCTTTT 57.193 29.630 0.00 0.00 0.00 2.27
849 867 8.440833 CCGTTCGTTTCTAAATATGAGTTCTTT 58.559 33.333 0.00 0.00 0.00 2.52
850 868 7.816031 TCCGTTCGTTTCTAAATATGAGTTCTT 59.184 33.333 0.00 0.00 0.00 2.52
851 869 7.318141 TCCGTTCGTTTCTAAATATGAGTTCT 58.682 34.615 0.00 0.00 0.00 3.01
852 870 7.275123 ACTCCGTTCGTTTCTAAATATGAGTTC 59.725 37.037 0.00 0.00 0.00 3.01
853 871 7.095270 ACTCCGTTCGTTTCTAAATATGAGTT 58.905 34.615 0.00 0.00 0.00 3.01
854 872 6.628185 ACTCCGTTCGTTTCTAAATATGAGT 58.372 36.000 0.00 0.00 0.00 3.41
855 873 7.914346 AGTACTCCGTTCGTTTCTAAATATGAG 59.086 37.037 0.00 0.00 0.00 2.90
856 874 7.765307 AGTACTCCGTTCGTTTCTAAATATGA 58.235 34.615 0.00 0.00 0.00 2.15
857 875 7.982371 AGTACTCCGTTCGTTTCTAAATATG 57.018 36.000 0.00 0.00 0.00 1.78
866 884 3.508762 CTGCATAGTACTCCGTTCGTTT 58.491 45.455 0.00 0.00 0.00 3.60
870 888 2.194271 GTGCTGCATAGTACTCCGTTC 58.806 52.381 5.27 0.00 36.70 3.95
873 891 0.100682 ACGTGCTGCATAGTACTCCG 59.899 55.000 5.27 4.44 37.39 4.63
874 892 1.135083 ACACGTGCTGCATAGTACTCC 60.135 52.381 17.22 0.00 37.39 3.85
891 909 1.641677 GGCACGTTGACAGTGACAC 59.358 57.895 0.00 0.00 46.41 3.67
899 917 2.050985 GCAGCTTGGCACGTTGAC 60.051 61.111 11.91 0.00 0.00 3.18
912 930 0.958382 TATGGTCGGTTGTTGGCAGC 60.958 55.000 0.00 0.00 0.00 5.25
925 943 1.065251 GGTCGTTCCTCTCGTATGGTC 59.935 57.143 0.00 0.00 0.00 4.02
977 995 2.427753 GGCACGGATGATCCCCTC 59.572 66.667 5.78 0.00 31.13 4.30
1170 1188 7.443879 ATCAACCTCTGAAGAGAAGTTTTTCTC 59.556 37.037 8.95 8.81 45.86 2.87
1191 1516 7.772757 AGGAAGAACATAGGATTTCAGATCAAC 59.227 37.037 0.00 0.00 0.00 3.18
1251 1651 2.783135 CAAGCTTTCCTGCCTGACTTA 58.217 47.619 0.00 0.00 0.00 2.24
1289 2387 5.419239 AGAACTGAGATCAAAGCTAAGCT 57.581 39.130 0.00 0.00 42.56 3.74
1329 2445 0.323816 TCTCCGTGTCCTCTGCTCAT 60.324 55.000 0.00 0.00 0.00 2.90
1331 2480 0.172352 CTTCTCCGTGTCCTCTGCTC 59.828 60.000 0.00 0.00 0.00 4.26
1476 2625 0.742281 CTGCTGACCCGAAGTCCATG 60.742 60.000 3.51 0.00 45.68 3.66
1511 2660 2.948720 GCTGGAGCCGGAAGACAGT 61.949 63.158 5.05 0.00 34.31 3.55
1532 2681 0.586319 TGAAAACGAAGCTTGCTCCG 59.414 50.000 2.10 3.25 0.00 4.63
1533 2682 2.997485 ATGAAAACGAAGCTTGCTCC 57.003 45.000 2.10 0.00 0.00 4.70
1560 2709 2.947652 AGATGCCGGAAGAACATTCATG 59.052 45.455 5.05 0.00 0.00 3.07
1561 2710 2.947652 CAGATGCCGGAAGAACATTCAT 59.052 45.455 5.05 0.00 0.00 2.57
1564 2713 2.787473 TCAGATGCCGGAAGAACATT 57.213 45.000 5.05 0.00 0.00 2.71
1565 2714 2.171237 TCATCAGATGCCGGAAGAACAT 59.829 45.455 5.05 0.00 0.00 2.71
1566 2715 1.554617 TCATCAGATGCCGGAAGAACA 59.445 47.619 5.05 0.00 0.00 3.18
1567 2716 2.315925 TCATCAGATGCCGGAAGAAC 57.684 50.000 5.05 0.00 0.00 3.01
1599 2757 2.676750 GCCAAATTGTTTCCGATTCCCC 60.677 50.000 0.00 0.00 0.00 4.81
1606 2764 6.018343 ACAACTTAAATGCCAAATTGTTTCCG 60.018 34.615 0.00 0.00 0.00 4.30
1617 2776 2.819608 GGCTCTGACAACTTAAATGCCA 59.180 45.455 0.00 0.00 37.91 4.92
1618 2777 2.819608 TGGCTCTGACAACTTAAATGCC 59.180 45.455 0.00 0.00 38.42 4.40
1619 2778 4.156556 TGATGGCTCTGACAACTTAAATGC 59.843 41.667 0.00 0.00 0.00 3.56
1671 2861 3.071874 TGTCAACATGATCTTCCCCAC 57.928 47.619 0.00 0.00 0.00 4.61
1673 2863 4.706476 TGAAATGTCAACATGATCTTCCCC 59.294 41.667 0.00 0.00 36.56 4.81
1675 2865 5.106038 TGCTGAAATGTCAACATGATCTTCC 60.106 40.000 0.00 0.00 36.56 3.46
1676 2866 5.946298 TGCTGAAATGTCAACATGATCTTC 58.054 37.500 0.00 0.00 36.56 2.87
1677 2867 5.970317 TGCTGAAATGTCAACATGATCTT 57.030 34.783 0.00 0.00 36.56 2.40
1679 2869 6.035650 CCAAATGCTGAAATGTCAACATGATC 59.964 38.462 2.49 0.10 39.19 2.92
1680 2870 5.872617 CCAAATGCTGAAATGTCAACATGAT 59.127 36.000 2.49 0.00 39.19 2.45
1682 2872 4.142988 GCCAAATGCTGAAATGTCAACATG 60.143 41.667 2.49 0.00 39.19 3.21
1683 2873 3.998341 GCCAAATGCTGAAATGTCAACAT 59.002 39.130 0.00 0.00 41.35 2.71
1684 2874 3.181468 TGCCAAATGCTGAAATGTCAACA 60.181 39.130 0.00 0.00 42.00 3.33
1707 3296 7.523873 CGATTAGAGGGAGTAGCATAATTGTGA 60.524 40.741 6.35 0.00 0.00 3.58
1709 3306 6.267928 ACGATTAGAGGGAGTAGCATAATTGT 59.732 38.462 0.00 0.00 0.00 2.71
1721 3318 5.463724 GCTGATTTTGTACGATTAGAGGGAG 59.536 44.000 0.00 0.00 0.00 4.30
1723 3320 4.209288 CGCTGATTTTGTACGATTAGAGGG 59.791 45.833 0.00 0.00 0.00 4.30
1724 3321 5.041287 TCGCTGATTTTGTACGATTAGAGG 58.959 41.667 0.00 0.00 0.00 3.69
1725 3322 5.515270 TGTCGCTGATTTTGTACGATTAGAG 59.485 40.000 0.00 0.00 34.96 2.43
1726 3323 5.404096 TGTCGCTGATTTTGTACGATTAGA 58.596 37.500 0.00 0.00 34.96 2.10
1727 3324 5.696260 TGTCGCTGATTTTGTACGATTAG 57.304 39.130 0.00 0.00 34.96 1.73
1728 3325 6.656314 ATTGTCGCTGATTTTGTACGATTA 57.344 33.333 0.00 0.00 34.96 1.75
1729 3326 5.545658 ATTGTCGCTGATTTTGTACGATT 57.454 34.783 0.00 0.00 34.96 3.34
1730 3327 5.545658 AATTGTCGCTGATTTTGTACGAT 57.454 34.783 0.00 0.00 34.96 3.73
1731 3328 6.469139 TTAATTGTCGCTGATTTTGTACGA 57.531 33.333 0.00 0.00 0.00 3.43
1732 3329 8.882199 CATATTAATTGTCGCTGATTTTGTACG 58.118 33.333 0.00 0.00 0.00 3.67
1733 3330 9.929722 TCATATTAATTGTCGCTGATTTTGTAC 57.070 29.630 0.00 0.00 0.00 2.90
1737 3334 9.683069 GGATTCATATTAATTGTCGCTGATTTT 57.317 29.630 0.00 0.00 0.00 1.82
1738 3335 8.849168 TGGATTCATATTAATTGTCGCTGATTT 58.151 29.630 0.00 0.00 0.00 2.17
1739 3336 8.394971 TGGATTCATATTAATTGTCGCTGATT 57.605 30.769 0.00 0.00 0.00 2.57
1740 3337 7.984422 TGGATTCATATTAATTGTCGCTGAT 57.016 32.000 0.00 0.00 0.00 2.90
1741 3338 7.041167 CCTTGGATTCATATTAATTGTCGCTGA 60.041 37.037 0.00 0.00 0.00 4.26
1742 3339 7.080099 CCTTGGATTCATATTAATTGTCGCTG 58.920 38.462 0.00 0.00 0.00 5.18
1743 3340 6.207417 CCCTTGGATTCATATTAATTGTCGCT 59.793 38.462 0.00 0.00 0.00 4.93
1744 3341 6.206634 TCCCTTGGATTCATATTAATTGTCGC 59.793 38.462 0.00 0.00 0.00 5.19
1745 3342 7.445402 AGTCCCTTGGATTCATATTAATTGTCG 59.555 37.037 0.00 0.00 32.73 4.35
1746 3343 8.697507 AGTCCCTTGGATTCATATTAATTGTC 57.302 34.615 0.00 0.00 32.73 3.18
1747 3344 9.799106 CTAGTCCCTTGGATTCATATTAATTGT 57.201 33.333 0.00 0.00 32.73 2.71
1748 3345 9.799106 ACTAGTCCCTTGGATTCATATTAATTG 57.201 33.333 0.00 0.00 32.73 2.32
1755 3352 9.847224 GAAATAAACTAGTCCCTTGGATTCATA 57.153 33.333 0.00 0.00 32.73 2.15
1756 3353 7.780271 GGAAATAAACTAGTCCCTTGGATTCAT 59.220 37.037 0.00 0.00 32.73 2.57
1757 3354 7.036863 AGGAAATAAACTAGTCCCTTGGATTCA 60.037 37.037 0.00 0.00 32.73 2.57
1758 3355 7.347252 AGGAAATAAACTAGTCCCTTGGATTC 58.653 38.462 0.00 0.00 32.73 2.52
1759 3356 7.184753 AGAGGAAATAAACTAGTCCCTTGGATT 59.815 37.037 0.00 0.00 32.73 3.01
1760 3357 6.678857 AGAGGAAATAAACTAGTCCCTTGGAT 59.321 38.462 0.00 0.00 32.73 3.41
1761 3358 6.030082 AGAGGAAATAAACTAGTCCCTTGGA 58.970 40.000 0.00 0.00 0.00 3.53
1762 3359 6.314899 AGAGGAAATAAACTAGTCCCTTGG 57.685 41.667 0.00 0.00 0.00 3.61
1763 3360 7.394816 TGAAGAGGAAATAAACTAGTCCCTTG 58.605 38.462 0.00 0.00 0.00 3.61
1764 3361 7.237887 ACTGAAGAGGAAATAAACTAGTCCCTT 59.762 37.037 0.00 0.00 0.00 3.95
1765 3362 6.731448 ACTGAAGAGGAAATAAACTAGTCCCT 59.269 38.462 0.00 0.00 0.00 4.20
1766 3363 6.948589 ACTGAAGAGGAAATAAACTAGTCCC 58.051 40.000 0.00 0.00 0.00 4.46
1767 3364 8.315482 AGAACTGAAGAGGAAATAAACTAGTCC 58.685 37.037 0.00 0.00 0.00 3.85
1768 3365 9.713713 AAGAACTGAAGAGGAAATAAACTAGTC 57.286 33.333 0.00 0.00 0.00 2.59
1769 3366 9.495572 CAAGAACTGAAGAGGAAATAAACTAGT 57.504 33.333 0.00 0.00 0.00 2.57
1770 3367 9.495572 ACAAGAACTGAAGAGGAAATAAACTAG 57.504 33.333 0.00 0.00 0.00 2.57
1771 3368 9.847224 AACAAGAACTGAAGAGGAAATAAACTA 57.153 29.630 0.00 0.00 0.00 2.24
1772 3369 8.753497 AACAAGAACTGAAGAGGAAATAAACT 57.247 30.769 0.00 0.00 0.00 2.66
1791 3389 2.907696 TGAGGGGATTAACCGAACAAGA 59.092 45.455 0.00 0.00 40.11 3.02
1792 3390 3.343941 TGAGGGGATTAACCGAACAAG 57.656 47.619 0.00 0.00 40.11 3.16
1794 3392 2.841266 TGATGAGGGGATTAACCGAACA 59.159 45.455 0.00 0.00 40.11 3.18
1795 3393 3.467803 CTGATGAGGGGATTAACCGAAC 58.532 50.000 0.00 0.00 40.11 3.95
1796 3394 2.158813 GCTGATGAGGGGATTAACCGAA 60.159 50.000 0.00 0.00 40.11 4.30
1798 3396 1.140852 TGCTGATGAGGGGATTAACCG 59.859 52.381 0.00 0.00 40.11 4.44
1799 3397 3.297134 TTGCTGATGAGGGGATTAACC 57.703 47.619 0.00 0.00 38.08 2.85
1801 3399 7.838696 TCTTAAATTTGCTGATGAGGGGATTAA 59.161 33.333 0.00 0.00 0.00 1.40
1815 3413 7.968014 ATTCTCCAATCCTCTTAAATTTGCT 57.032 32.000 0.00 0.00 0.00 3.91
1834 3432 6.515272 TCCCTTGCAAGTGAAAATATTCTC 57.485 37.500 24.35 0.00 36.48 2.87
1840 3438 7.105588 GGATTAAATCCCTTGCAAGTGAAAAT 58.894 34.615 24.35 17.93 43.88 1.82
1875 3473 4.022416 TGTTCGATTTGGTTGGGATTGAAG 60.022 41.667 0.00 0.00 0.00 3.02
1885 3483 1.069227 GCGAGCTTGTTCGATTTGGTT 60.069 47.619 10.82 0.00 43.03 3.67
1902 3500 0.515564 GAAGCAAGTTAAAGGCGCGA 59.484 50.000 12.10 0.00 0.00 5.87
1907 3505 3.541711 CGAACACGAAGCAAGTTAAAGG 58.458 45.455 0.00 0.00 0.00 3.11
1908 3506 3.541711 CCGAACACGAAGCAAGTTAAAG 58.458 45.455 0.00 0.00 0.00 1.85
1913 3529 1.227556 AGCCGAACACGAAGCAAGT 60.228 52.632 0.00 0.00 0.00 3.16
1915 3531 2.892334 GCAGCCGAACACGAAGCAA 61.892 57.895 0.00 0.00 0.00 3.91
2067 3688 0.388520 CCTCGTCGAGCACATGAACA 60.389 55.000 17.02 0.00 0.00 3.18
2200 3848 2.426522 CTGGGATGCCAATATACACCG 58.573 52.381 7.59 0.00 0.00 4.94
2340 4006 2.224159 AGGGACGCTTGATGTGGGT 61.224 57.895 0.00 0.00 0.00 4.51
2435 4118 0.759346 ACGGGACAGAAAACAGAGCT 59.241 50.000 0.00 0.00 0.00 4.09
2446 4129 1.605712 GGTCAGAAGAACACGGGACAG 60.606 57.143 0.00 0.00 0.00 3.51
2503 4189 0.447801 CCTCGTCGCCTGAAAAATGG 59.552 55.000 0.00 0.00 0.00 3.16
2647 4333 1.356624 GGTGTTGTGACTGCAGCAC 59.643 57.895 25.13 25.13 45.63 4.40
2724 4410 4.302455 CAGAGGATTAGCATACCGTTCAG 58.698 47.826 0.00 0.00 0.00 3.02
2785 4475 4.332828 ACCTGGATGTTGTTAAACCTAGC 58.667 43.478 0.00 0.00 35.25 3.42
2786 4476 6.038271 GCATACCTGGATGTTGTTAAACCTAG 59.962 42.308 0.00 0.00 35.25 3.02
2918 4637 3.172050 CGTACTCGACAAGGTCATCAAG 58.828 50.000 0.00 0.00 39.71 3.02
2923 4642 1.174078 TGCCGTACTCGACAAGGTCA 61.174 55.000 0.00 0.00 39.71 4.02
2977 4696 8.146412 TCTGATCACATATCAATGAACTACTGG 58.854 37.037 0.00 0.00 36.54 4.00
2982 4709 6.589135 TGCTCTGATCACATATCAATGAACT 58.411 36.000 0.00 0.00 36.54 3.01
2989 4716 9.346005 ACATTATTTTGCTCTGATCACATATCA 57.654 29.630 0.00 0.00 0.00 2.15
3090 4817 7.041780 GCTAGGAAAATGAAGCGATTCTCAATA 60.042 37.037 15.31 0.00 0.00 1.90
3101 4828 1.025041 CGGGGCTAGGAAAATGAAGC 58.975 55.000 0.00 0.00 0.00 3.86
3106 4833 1.269703 ACGGTCGGGGCTAGGAAAAT 61.270 55.000 0.00 0.00 0.00 1.82
3118 4845 2.202878 CATGCCCACTACGGTCGG 60.203 66.667 0.00 0.00 0.00 4.79
3191 4926 2.826488 AGATACCACTCACCTGCTCTT 58.174 47.619 0.00 0.00 0.00 2.85
3206 4941 6.325286 AGGAGGAAAAGATGGTCACTAGATAC 59.675 42.308 0.00 0.00 0.00 2.24
3217 4952 3.818180 CATCTGGAGGAGGAAAAGATGG 58.182 50.000 0.00 0.00 40.25 3.51
3218 4953 3.212685 GCATCTGGAGGAGGAAAAGATG 58.787 50.000 6.60 6.60 44.55 2.90
3219 4954 2.174424 GGCATCTGGAGGAGGAAAAGAT 59.826 50.000 0.00 0.00 0.00 2.40
3220 4955 1.561542 GGCATCTGGAGGAGGAAAAGA 59.438 52.381 0.00 0.00 0.00 2.52
3221 4956 1.563410 AGGCATCTGGAGGAGGAAAAG 59.437 52.381 0.00 0.00 0.00 2.27
3222 4957 1.673767 AGGCATCTGGAGGAGGAAAA 58.326 50.000 0.00 0.00 0.00 2.29
3223 4958 1.673767 AAGGCATCTGGAGGAGGAAA 58.326 50.000 0.00 0.00 0.00 3.13
3224 4959 1.673767 AAAGGCATCTGGAGGAGGAA 58.326 50.000 0.00 0.00 0.00 3.36
3225 4960 1.673767 AAAAGGCATCTGGAGGAGGA 58.326 50.000 0.00 0.00 0.00 3.71
3226 4961 2.097825 CAAAAAGGCATCTGGAGGAGG 58.902 52.381 0.00 0.00 0.00 4.30
3227 4962 1.475682 GCAAAAAGGCATCTGGAGGAG 59.524 52.381 0.00 0.00 0.00 3.69
3228 4963 1.076024 AGCAAAAAGGCATCTGGAGGA 59.924 47.619 0.00 0.00 35.83 3.71
3229 4964 1.553706 AGCAAAAAGGCATCTGGAGG 58.446 50.000 0.00 0.00 35.83 4.30
3230 4965 2.424956 GGTAGCAAAAAGGCATCTGGAG 59.575 50.000 0.00 0.00 35.83 3.86
3231 4966 2.041620 AGGTAGCAAAAAGGCATCTGGA 59.958 45.455 0.00 0.00 35.83 3.86
3232 4967 2.424956 GAGGTAGCAAAAAGGCATCTGG 59.575 50.000 0.00 0.00 35.83 3.86
3233 4968 3.128242 CAGAGGTAGCAAAAAGGCATCTG 59.872 47.826 0.00 0.00 35.83 2.90
3234 4969 3.350833 CAGAGGTAGCAAAAAGGCATCT 58.649 45.455 0.00 0.00 35.83 2.90
3235 4970 2.159324 GCAGAGGTAGCAAAAAGGCATC 60.159 50.000 0.00 0.00 35.83 3.91
3236 4971 1.821136 GCAGAGGTAGCAAAAAGGCAT 59.179 47.619 0.00 0.00 35.83 4.40
3237 4972 1.247567 GCAGAGGTAGCAAAAAGGCA 58.752 50.000 0.00 0.00 35.83 4.75
3238 4973 0.169009 CGCAGAGGTAGCAAAAAGGC 59.831 55.000 0.00 0.00 0.00 4.35
3239 4974 0.804989 CCGCAGAGGTAGCAAAAAGG 59.195 55.000 0.00 0.00 34.51 3.11
3251 4986 0.684805 ACTCCCCTTCTACCGCAGAG 60.685 60.000 0.00 0.00 33.83 3.35
3252 4987 0.252103 AACTCCCCTTCTACCGCAGA 60.252 55.000 0.00 0.00 0.00 4.26
3253 4988 0.175989 GAACTCCCCTTCTACCGCAG 59.824 60.000 0.00 0.00 0.00 5.18
3254 4989 0.543410 TGAACTCCCCTTCTACCGCA 60.543 55.000 0.00 0.00 0.00 5.69
3255 4990 0.611714 TTGAACTCCCCTTCTACCGC 59.388 55.000 0.00 0.00 0.00 5.68
3256 4991 1.207329 CCTTGAACTCCCCTTCTACCG 59.793 57.143 0.00 0.00 0.00 4.02
3257 4992 2.236644 GACCTTGAACTCCCCTTCTACC 59.763 54.545 0.00 0.00 0.00 3.18
3258 4993 2.236644 GGACCTTGAACTCCCCTTCTAC 59.763 54.545 0.00 0.00 0.00 2.59
3259 4994 2.547990 GGACCTTGAACTCCCCTTCTA 58.452 52.381 0.00 0.00 0.00 2.10
3260 4995 1.363246 GGACCTTGAACTCCCCTTCT 58.637 55.000 0.00 0.00 0.00 2.85
3261 4996 0.036294 CGGACCTTGAACTCCCCTTC 60.036 60.000 0.00 0.00 0.00 3.46
3262 4997 1.489560 CCGGACCTTGAACTCCCCTT 61.490 60.000 0.00 0.00 0.00 3.95
3263 4998 1.918800 CCGGACCTTGAACTCCCCT 60.919 63.158 0.00 0.00 0.00 4.79
3264 4999 2.669240 CCGGACCTTGAACTCCCC 59.331 66.667 0.00 0.00 0.00 4.81
3265 5000 2.046217 GCCGGACCTTGAACTCCC 60.046 66.667 5.05 0.00 0.00 4.30
3266 5001 2.434359 CGCCGGACCTTGAACTCC 60.434 66.667 5.05 0.00 0.00 3.85
3267 5002 2.434359 CCGCCGGACCTTGAACTC 60.434 66.667 5.05 0.00 0.00 3.01
3268 5003 4.016706 CCCGCCGGACCTTGAACT 62.017 66.667 5.05 0.00 0.00 3.01
3280 5015 3.573772 GAAGCAACCAAAGCCCGCC 62.574 63.158 0.00 0.00 0.00 6.13
3281 5016 2.049156 GAAGCAACCAAAGCCCGC 60.049 61.111 0.00 0.00 0.00 6.13
3282 5017 1.172180 TCTGAAGCAACCAAAGCCCG 61.172 55.000 0.00 0.00 0.00 6.13
3283 5018 1.203287 GATCTGAAGCAACCAAAGCCC 59.797 52.381 0.00 0.00 0.00 5.19
3284 5019 2.165998 AGATCTGAAGCAACCAAAGCC 58.834 47.619 0.00 0.00 0.00 4.35
3285 5020 4.256920 TCTAGATCTGAAGCAACCAAAGC 58.743 43.478 5.18 0.00 0.00 3.51
3286 5021 4.332268 GCTCTAGATCTGAAGCAACCAAAG 59.668 45.833 20.35 1.30 0.00 2.77
3287 5022 4.019860 AGCTCTAGATCTGAAGCAACCAAA 60.020 41.667 24.63 0.00 0.00 3.28
3288 5023 3.517100 AGCTCTAGATCTGAAGCAACCAA 59.483 43.478 24.63 0.00 0.00 3.67
3289 5024 3.102972 AGCTCTAGATCTGAAGCAACCA 58.897 45.455 24.63 0.00 0.00 3.67
3290 5025 3.817709 AGCTCTAGATCTGAAGCAACC 57.182 47.619 24.63 4.50 0.00 3.77
3291 5026 6.142818 TCTAAGCTCTAGATCTGAAGCAAC 57.857 41.667 24.63 4.77 0.00 4.17
3292 5027 5.301551 CCTCTAAGCTCTAGATCTGAAGCAA 59.698 44.000 24.63 15.23 0.00 3.91
3293 5028 4.826733 CCTCTAAGCTCTAGATCTGAAGCA 59.173 45.833 24.63 10.68 0.00 3.91
3294 5029 4.218417 CCCTCTAAGCTCTAGATCTGAAGC 59.782 50.000 18.56 18.56 0.00 3.86
3295 5030 4.218417 GCCCTCTAAGCTCTAGATCTGAAG 59.782 50.000 5.18 3.63 0.00 3.02
3296 5031 4.148838 GCCCTCTAAGCTCTAGATCTGAA 58.851 47.826 5.18 0.00 0.00 3.02
3297 5032 3.499563 GGCCCTCTAAGCTCTAGATCTGA 60.500 52.174 5.18 0.03 0.00 3.27
3298 5033 2.825532 GGCCCTCTAAGCTCTAGATCTG 59.174 54.545 5.18 0.00 0.00 2.90
3299 5034 2.448961 TGGCCCTCTAAGCTCTAGATCT 59.551 50.000 0.00 0.00 0.00 2.75
3300 5035 2.883026 TGGCCCTCTAAGCTCTAGATC 58.117 52.381 0.00 0.00 0.00 2.75
3301 5036 3.172339 CATGGCCCTCTAAGCTCTAGAT 58.828 50.000 0.00 0.00 0.00 1.98
3302 5037 2.177888 TCATGGCCCTCTAAGCTCTAGA 59.822 50.000 0.00 0.00 0.00 2.43
3303 5038 2.298729 GTCATGGCCCTCTAAGCTCTAG 59.701 54.545 0.00 0.00 0.00 2.43
3304 5039 2.320781 GTCATGGCCCTCTAAGCTCTA 58.679 52.381 0.00 0.00 0.00 2.43
3305 5040 1.127343 GTCATGGCCCTCTAAGCTCT 58.873 55.000 0.00 0.00 0.00 4.09
3306 5041 0.249657 CGTCATGGCCCTCTAAGCTC 60.250 60.000 0.00 0.00 0.00 4.09
3307 5042 1.826024 CGTCATGGCCCTCTAAGCT 59.174 57.895 0.00 0.00 0.00 3.74
3308 5043 1.889573 GCGTCATGGCCCTCTAAGC 60.890 63.158 0.00 0.00 0.00 3.09
3309 5044 0.249657 GAGCGTCATGGCCCTCTAAG 60.250 60.000 4.69 0.00 0.00 2.18
3310 5045 1.823295 GAGCGTCATGGCCCTCTAA 59.177 57.895 4.69 0.00 0.00 2.10
3311 5046 2.490148 CGAGCGTCATGGCCCTCTA 61.490 63.158 10.12 0.00 0.00 2.43
3312 5047 3.842923 CGAGCGTCATGGCCCTCT 61.843 66.667 10.12 0.00 0.00 3.69
3315 5050 3.521529 ATAGCGAGCGTCATGGCCC 62.522 63.158 0.00 0.00 0.00 5.80
3316 5051 2.029666 ATAGCGAGCGTCATGGCC 59.970 61.111 0.00 0.00 0.00 5.36
3317 5052 1.154205 AACATAGCGAGCGTCATGGC 61.154 55.000 0.00 0.00 0.00 4.40
3318 5053 0.578683 CAACATAGCGAGCGTCATGG 59.421 55.000 0.00 0.00 0.00 3.66
3319 5054 1.559831 TCAACATAGCGAGCGTCATG 58.440 50.000 0.00 0.00 0.00 3.07
3320 5055 2.515926 ATCAACATAGCGAGCGTCAT 57.484 45.000 0.00 0.00 0.00 3.06
3321 5056 2.159240 AGAATCAACATAGCGAGCGTCA 60.159 45.455 0.00 0.00 0.00 4.35
3322 5057 2.464865 AGAATCAACATAGCGAGCGTC 58.535 47.619 0.00 0.00 0.00 5.19
3323 5058 2.586258 AGAATCAACATAGCGAGCGT 57.414 45.000 0.00 0.00 0.00 5.07
3324 5059 2.598439 GCAAGAATCAACATAGCGAGCG 60.598 50.000 0.00 0.00 0.00 5.03
3325 5060 2.286654 GGCAAGAATCAACATAGCGAGC 60.287 50.000 0.00 0.00 0.00 5.03
3326 5061 3.201290 AGGCAAGAATCAACATAGCGAG 58.799 45.455 0.00 0.00 0.00 5.03
3327 5062 3.266510 AGGCAAGAATCAACATAGCGA 57.733 42.857 0.00 0.00 0.00 4.93
3328 5063 3.242870 GGAAGGCAAGAATCAACATAGCG 60.243 47.826 0.00 0.00 0.00 4.26
3329 5064 3.242870 CGGAAGGCAAGAATCAACATAGC 60.243 47.826 0.00 0.00 0.00 2.97
3330 5065 3.242870 GCGGAAGGCAAGAATCAACATAG 60.243 47.826 0.00 0.00 42.87 2.23
3331 5066 2.682856 GCGGAAGGCAAGAATCAACATA 59.317 45.455 0.00 0.00 42.87 2.29
3332 5067 1.474077 GCGGAAGGCAAGAATCAACAT 59.526 47.619 0.00 0.00 42.87 2.71
3333 5068 0.881118 GCGGAAGGCAAGAATCAACA 59.119 50.000 0.00 0.00 42.87 3.33
3334 5069 3.702478 GCGGAAGGCAAGAATCAAC 57.298 52.632 0.00 0.00 42.87 3.18
3345 5080 1.026718 AATGAAAGCTCGGCGGAAGG 61.027 55.000 7.21 0.00 0.00 3.46
3346 5081 0.097674 CAATGAAAGCTCGGCGGAAG 59.902 55.000 7.21 0.00 0.00 3.46
3347 5082 0.605319 ACAATGAAAGCTCGGCGGAA 60.605 50.000 7.21 0.00 0.00 4.30
3348 5083 0.605319 AACAATGAAAGCTCGGCGGA 60.605 50.000 7.21 0.00 0.00 5.54
3349 5084 0.240945 AAACAATGAAAGCTCGGCGG 59.759 50.000 7.21 0.00 0.00 6.13
3350 5085 1.330306 CAAACAATGAAAGCTCGGCG 58.670 50.000 0.00 0.00 0.00 6.46
3351 5086 1.701704 CCAAACAATGAAAGCTCGGC 58.298 50.000 0.00 0.00 0.00 5.54
3352 5087 1.669795 GGCCAAACAATGAAAGCTCGG 60.670 52.381 0.00 0.00 0.00 4.63
3353 5088 1.270550 AGGCCAAACAATGAAAGCTCG 59.729 47.619 5.01 0.00 0.00 5.03
3354 5089 3.243839 TGAAGGCCAAACAATGAAAGCTC 60.244 43.478 5.01 0.00 0.00 4.09
3355 5090 2.699846 TGAAGGCCAAACAATGAAAGCT 59.300 40.909 5.01 0.00 0.00 3.74
3356 5091 2.802247 GTGAAGGCCAAACAATGAAAGC 59.198 45.455 5.01 0.00 0.00 3.51
3357 5092 4.057406 TGTGAAGGCCAAACAATGAAAG 57.943 40.909 5.01 0.00 0.00 2.62
3358 5093 4.378774 CATGTGAAGGCCAAACAATGAAA 58.621 39.130 5.01 0.00 0.00 2.69
3359 5094 3.244146 CCATGTGAAGGCCAAACAATGAA 60.244 43.478 5.01 0.00 0.00 2.57
3360 5095 2.299582 CCATGTGAAGGCCAAACAATGA 59.700 45.455 5.01 0.00 0.00 2.57
3361 5096 2.299582 TCCATGTGAAGGCCAAACAATG 59.700 45.455 5.01 2.96 0.00 2.82
3362 5097 2.607499 TCCATGTGAAGGCCAAACAAT 58.393 42.857 5.01 0.00 0.00 2.71
3363 5098 2.079170 TCCATGTGAAGGCCAAACAA 57.921 45.000 5.01 0.00 0.00 2.83
3364 5099 1.894466 CATCCATGTGAAGGCCAAACA 59.106 47.619 5.01 6.57 0.00 2.83
3365 5100 2.094545 GTCATCCATGTGAAGGCCAAAC 60.095 50.000 5.01 0.00 0.00 2.93
3366 5101 2.170166 GTCATCCATGTGAAGGCCAAA 58.830 47.619 5.01 0.00 0.00 3.28
3367 5102 1.075212 TGTCATCCATGTGAAGGCCAA 59.925 47.619 5.01 0.00 0.00 4.52
3368 5103 0.697658 TGTCATCCATGTGAAGGCCA 59.302 50.000 5.01 0.00 0.00 5.36
3369 5104 2.062971 ATGTCATCCATGTGAAGGCC 57.937 50.000 0.00 0.00 30.69 5.19
3370 5105 6.882610 TTAATATGTCATCCATGTGAAGGC 57.117 37.500 0.00 0.00 34.86 4.35
3387 5122 9.820229 CGCACGGATGTATACAAAAATTAATAT 57.180 29.630 10.14 0.00 0.00 1.28
3388 5123 7.799447 GCGCACGGATGTATACAAAAATTAATA 59.201 33.333 10.14 0.00 0.00 0.98
3389 5124 6.635239 GCGCACGGATGTATACAAAAATTAAT 59.365 34.615 10.14 0.00 0.00 1.40
3390 5125 5.966503 GCGCACGGATGTATACAAAAATTAA 59.033 36.000 10.14 0.00 0.00 1.40
3391 5126 5.294799 AGCGCACGGATGTATACAAAAATTA 59.705 36.000 11.47 0.00 0.00 1.40
3392 5127 4.095782 AGCGCACGGATGTATACAAAAATT 59.904 37.500 11.47 0.00 0.00 1.82
3393 5128 3.625764 AGCGCACGGATGTATACAAAAAT 59.374 39.130 11.47 0.00 0.00 1.82
3394 5129 3.004171 AGCGCACGGATGTATACAAAAA 58.996 40.909 11.47 0.00 0.00 1.94
3395 5130 2.623535 AGCGCACGGATGTATACAAAA 58.376 42.857 11.47 0.00 0.00 2.44
3396 5131 2.303163 AGCGCACGGATGTATACAAA 57.697 45.000 11.47 0.00 0.00 2.83
3397 5132 3.653539 ATAGCGCACGGATGTATACAA 57.346 42.857 11.47 0.00 0.00 2.41
3398 5133 3.653539 AATAGCGCACGGATGTATACA 57.346 42.857 11.47 8.27 0.00 2.29
3399 5134 4.377022 CCAAAATAGCGCACGGATGTATAC 60.377 45.833 11.47 0.00 0.00 1.47
3400 5135 3.743911 CCAAAATAGCGCACGGATGTATA 59.256 43.478 11.47 0.00 0.00 1.47
3401 5136 2.548057 CCAAAATAGCGCACGGATGTAT 59.452 45.455 11.47 0.00 0.00 2.29
3402 5137 1.937223 CCAAAATAGCGCACGGATGTA 59.063 47.619 11.47 0.00 0.00 2.29
3403 5138 0.732571 CCAAAATAGCGCACGGATGT 59.267 50.000 11.47 0.00 0.00 3.06
3404 5139 0.029300 CCCAAAATAGCGCACGGATG 59.971 55.000 11.47 2.53 0.00 3.51
3405 5140 1.101049 CCCCAAAATAGCGCACGGAT 61.101 55.000 11.47 0.00 0.00 4.18
3406 5141 1.747367 CCCCAAAATAGCGCACGGA 60.747 57.895 11.47 0.00 0.00 4.69
3407 5142 2.770589 CCCCCAAAATAGCGCACGG 61.771 63.158 11.47 0.00 0.00 4.94
3408 5143 1.988834 GACCCCCAAAATAGCGCACG 61.989 60.000 11.47 0.00 0.00 5.34
3415 5150 3.141272 ACAGTCCAAAGACCCCCAAAATA 59.859 43.478 0.00 0.00 44.72 1.40
3421 5156 0.539669 CCAACAGTCCAAAGACCCCC 60.540 60.000 0.00 0.00 44.72 5.40
3429 5164 2.983907 TCAACGTACCAACAGTCCAA 57.016 45.000 0.00 0.00 0.00 3.53
3433 5168 1.880646 GCCCATCAACGTACCAACAGT 60.881 52.381 0.00 0.00 0.00 3.55
3465 5200 2.972625 TGCAAACTAATGAGGTCGAGG 58.027 47.619 0.00 0.00 0.00 4.63
3466 5201 4.327854 GTTGCAAACTAATGAGGTCGAG 57.672 45.455 0.00 0.00 45.32 4.04
3485 5220 0.106419 ACGAACCACCCCATGTTGTT 60.106 50.000 0.00 0.00 35.66 2.83
3491 5226 2.307686 ACAAGAATACGAACCACCCCAT 59.692 45.455 0.00 0.00 0.00 4.00
3510 5245 1.616374 TGAGTGTTCGTCATAGCCACA 59.384 47.619 0.00 0.00 0.00 4.17
3525 5261 3.318839 TGTCCTTTGCCAAAATCTGAGTG 59.681 43.478 0.00 0.00 0.00 3.51
3546 7120 0.175760 ACGACCCGACATCATCCTTG 59.824 55.000 0.00 0.00 0.00 3.61
3562 7136 2.093921 TCATATCCCTTGCAACGAACGA 60.094 45.455 0.00 0.00 0.00 3.85
3573 7147 5.912149 TGAGCTTAACCATCATATCCCTT 57.088 39.130 0.00 0.00 0.00 3.95
3575 7149 5.006386 CCTTGAGCTTAACCATCATATCCC 58.994 45.833 0.00 0.00 0.00 3.85
3580 7154 2.025037 TGCCCTTGAGCTTAACCATCAT 60.025 45.455 0.00 0.00 0.00 2.45
3583 7157 2.603075 TTGCCCTTGAGCTTAACCAT 57.397 45.000 0.00 0.00 0.00 3.55
3637 7211 2.770164 ACAAAGTCTGGATCCGGAAG 57.230 50.000 25.22 16.50 32.55 3.46
3692 7527 2.040213 CTTCACACCGCCATCATCGC 62.040 60.000 0.00 0.00 0.00 4.58
3695 7581 0.107508 CTCCTTCACACCGCCATCAT 60.108 55.000 0.00 0.00 0.00 2.45
3800 7769 0.874607 ACGAGAGACCACGTTTGCAC 60.875 55.000 0.00 0.00 39.75 4.57
3906 8848 5.599999 ATGTGGAATTAGCTCGAAGTACT 57.400 39.130 0.00 0.00 0.00 2.73
3927 8870 2.297701 AGTTCAAGACAACCACGCAAT 58.702 42.857 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.