Multiple sequence alignment - TraesCS2B01G506500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G506500 chr2B 100.000 4801 0 0 1 4801 703349081 703353881 0.000000e+00 8866.0
1 TraesCS2B01G506500 chr2B 86.035 2943 297 46 792 3636 700205575 700208501 0.000000e+00 3053.0
2 TraesCS2B01G506500 chr2B 78.707 2644 373 84 964 3517 701503299 701500756 0.000000e+00 1589.0
3 TraesCS2B01G506500 chr2B 77.555 1399 228 45 2156 3501 515049332 515047967 0.000000e+00 765.0
4 TraesCS2B01G506500 chr2B 91.919 99 8 0 3765 3863 31741718 31741620 6.480000e-29 139.0
5 TraesCS2B01G506500 chr2B 92.000 100 6 2 3768 3865 197683326 197683227 6.480000e-29 139.0
6 TraesCS2B01G506500 chr2D 97.725 4175 49 7 2 4147 584233845 584238002 0.000000e+00 7142.0
7 TraesCS2B01G506500 chr2D 88.407 3252 297 52 772 4006 545729144 545725956 0.000000e+00 3843.0
8 TraesCS2B01G506500 chr2D 85.419 3052 308 50 670 3636 580970365 580973364 0.000000e+00 3044.0
9 TraesCS2B01G506500 chr2D 78.109 2412 328 81 1197 3517 582503815 582501513 0.000000e+00 1345.0
10 TraesCS2B01G506500 chr2D 86.756 823 66 19 14 801 545729975 545729161 0.000000e+00 876.0
11 TraesCS2B01G506500 chr2D 77.484 1399 230 42 2156 3501 435926301 435927667 0.000000e+00 760.0
12 TraesCS2B01G506500 chr2D 91.176 102 9 0 3751 3852 462248508 462248609 6.480000e-29 139.0
13 TraesCS2B01G506500 chr2D 93.827 81 5 0 2085 2165 580971836 580971916 6.530000e-24 122.0
14 TraesCS2B01G506500 chr2A 89.103 3010 284 30 772 3769 687312863 687315840 0.000000e+00 3701.0
15 TraesCS2B01G506500 chr2A 85.988 835 67 22 2 801 687312027 687312846 0.000000e+00 848.0
16 TraesCS2B01G506500 chr5A 83.901 323 25 7 4367 4675 605712848 605713157 2.830000e-72 283.0
17 TraesCS2B01G506500 chr5A 100.000 37 0 0 4713 4749 605713159 605713195 8.620000e-08 69.4
18 TraesCS2B01G506500 chr4A 74.559 680 124 26 2540 3181 603749273 603748605 7.980000e-63 252.0
19 TraesCS2B01G506500 chr4A 74.412 680 125 23 2540 3181 603819192 603818524 3.710000e-61 246.0
20 TraesCS2B01G506500 chr4B 92.233 103 7 1 3766 3867 454515529 454515427 1.390000e-30 145.0
21 TraesCS2B01G506500 chr3D 93.000 100 6 1 3761 3859 71371429 71371528 1.390000e-30 145.0
22 TraesCS2B01G506500 chr5B 95.556 90 3 1 3768 3857 241165063 241165151 5.010000e-30 143.0
23 TraesCS2B01G506500 chr1A 94.505 91 5 0 3768 3858 133417463 133417553 1.800000e-29 141.0
24 TraesCS2B01G506500 chr1B 88.034 117 9 4 3761 3875 196463136 196463249 3.010000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G506500 chr2B 703349081 703353881 4800 False 8866.0 8866 100.0000 1 4801 1 chr2B.!!$F2 4800
1 TraesCS2B01G506500 chr2B 700205575 700208501 2926 False 3053.0 3053 86.0350 792 3636 1 chr2B.!!$F1 2844
2 TraesCS2B01G506500 chr2B 701500756 701503299 2543 True 1589.0 1589 78.7070 964 3517 1 chr2B.!!$R4 2553
3 TraesCS2B01G506500 chr2B 515047967 515049332 1365 True 765.0 765 77.5550 2156 3501 1 chr2B.!!$R3 1345
4 TraesCS2B01G506500 chr2D 584233845 584238002 4157 False 7142.0 7142 97.7250 2 4147 1 chr2D.!!$F3 4145
5 TraesCS2B01G506500 chr2D 545725956 545729975 4019 True 2359.5 3843 87.5815 14 4006 2 chr2D.!!$R2 3992
6 TraesCS2B01G506500 chr2D 580970365 580973364 2999 False 1583.0 3044 89.6230 670 3636 2 chr2D.!!$F4 2966
7 TraesCS2B01G506500 chr2D 582501513 582503815 2302 True 1345.0 1345 78.1090 1197 3517 1 chr2D.!!$R1 2320
8 TraesCS2B01G506500 chr2D 435926301 435927667 1366 False 760.0 760 77.4840 2156 3501 1 chr2D.!!$F1 1345
9 TraesCS2B01G506500 chr2A 687312027 687315840 3813 False 2274.5 3701 87.5455 2 3769 2 chr2A.!!$F1 3767
10 TraesCS2B01G506500 chr4A 603748605 603749273 668 True 252.0 252 74.5590 2540 3181 1 chr4A.!!$R1 641
11 TraesCS2B01G506500 chr4A 603818524 603819192 668 True 246.0 246 74.4120 2540 3181 1 chr4A.!!$R2 641

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
493 526 0.771127 TAGCCCTTTGTGCTGGAAGT 59.229 50.0 0.0 0.0 39.91 3.01 F
2102 2323 0.114560 AAACAGGGAGACGAGGGAGA 59.885 55.0 0.0 0.0 0.00 3.71 F
2103 2324 0.336737 AACAGGGAGACGAGGGAGAT 59.663 55.0 0.0 0.0 0.00 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2104 2325 1.668419 CCCGTCATGGAAATGTCTCC 58.332 55.000 0.00 0.00 42.00 3.71 R
3367 3698 2.266554 CTGATCGAGTTGAGCAACCTC 58.733 52.381 9.56 6.32 43.57 3.85 R
4067 4441 2.474410 AATCAGACGTCCCCACTTTC 57.526 50.000 13.01 0.00 0.00 2.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
207 233 9.913310 TCATAGTTGGATGATATTTTGGTGTAA 57.087 29.630 0.00 0.00 30.75 2.41
221 247 6.426646 TTTGGTGTAACTTTTATTGCCCAT 57.573 33.333 0.00 0.00 36.74 4.00
291 318 3.056035 ACCCTTTGGAACTAGAACTAGCG 60.056 47.826 8.54 0.00 34.38 4.26
303 330 2.076863 GAACTAGCGCAGTCCATTTGT 58.923 47.619 11.47 0.00 36.04 2.83
305 332 2.504367 ACTAGCGCAGTCCATTTGTTT 58.496 42.857 11.47 0.00 28.33 2.83
306 333 2.884639 ACTAGCGCAGTCCATTTGTTTT 59.115 40.909 11.47 0.00 28.33 2.43
493 526 0.771127 TAGCCCTTTGTGCTGGAAGT 59.229 50.000 0.00 0.00 39.91 3.01
647 680 5.695851 AGAATGATGTTGGTCAGTGTTTC 57.304 39.130 0.00 0.00 0.00 2.78
730 764 6.435904 TGTTCTTCAAGTTTCCTCCTTTTGAA 59.564 34.615 0.00 0.00 36.60 2.69
926 1012 7.399765 TCCATCCATTTATTTGGTTCTGACATT 59.600 33.333 0.00 0.00 38.01 2.71
969 1060 8.452989 AATTTGTTTCTTTCTATCGTTGATGC 57.547 30.769 0.00 0.00 0.00 3.91
1300 1392 5.163561 CCCTCTATCCGATCAGAGATTAAGC 60.164 48.000 8.92 0.00 40.68 3.09
1925 2059 4.165758 AGAGATTGATTGGGAAGAGGAAGG 59.834 45.833 0.00 0.00 0.00 3.46
1938 2090 0.341609 AGGAAGGGGAAGAGGAGGAG 59.658 60.000 0.00 0.00 0.00 3.69
2046 2213 8.989980 CCACTTCTCCTACAAACTTACTTAAAG 58.010 37.037 0.00 0.00 41.33 1.85
2059 2226 6.531923 ACTTACTTAAAGGAAGAACAGGGAC 58.468 40.000 0.00 0.00 39.73 4.46
2100 2321 0.903454 GGAAACAGGGAGACGAGGGA 60.903 60.000 0.00 0.00 0.00 4.20
2101 2322 0.533032 GAAACAGGGAGACGAGGGAG 59.467 60.000 0.00 0.00 0.00 4.30
2102 2323 0.114560 AAACAGGGAGACGAGGGAGA 59.885 55.000 0.00 0.00 0.00 3.71
2103 2324 0.336737 AACAGGGAGACGAGGGAGAT 59.663 55.000 0.00 0.00 0.00 2.75
2104 2325 0.396417 ACAGGGAGACGAGGGAGATG 60.396 60.000 0.00 0.00 0.00 2.90
2105 2326 1.112315 CAGGGAGACGAGGGAGATGG 61.112 65.000 0.00 0.00 0.00 3.51
2325 2581 4.415596 AGAACTTGAATGGGCCACATAAA 58.584 39.130 9.28 0.00 39.40 1.40
2751 3040 3.914426 TGCCTTCTTCCATCTCCTTAC 57.086 47.619 0.00 0.00 0.00 2.34
3577 3921 1.067142 TGGTCGGTCACATAAGCACTC 60.067 52.381 0.00 0.00 0.00 3.51
3753 4102 0.738975 AGAGGCGTTGATTCGATCGA 59.261 50.000 15.15 15.15 0.00 3.59
3763 4112 2.362077 TGATTCGATCGATGCAGGAAGA 59.638 45.455 20.18 0.01 0.00 2.87
3873 4222 7.366226 AGTATTCATTAGGAGAGGAAGGAAGA 58.634 38.462 0.00 0.00 29.84 2.87
4030 4383 7.986085 ATTATTATGGTGTTGACATAGAGCC 57.014 36.000 0.00 0.00 32.85 4.70
4084 4458 1.111116 ACGAAAGTGGGGACGTCTGA 61.111 55.000 16.46 0.00 46.97 3.27
4100 4481 6.183360 GGACGTCTGATTTACTCTAGCAAAAC 60.183 42.308 16.46 0.00 0.00 2.43
4131 4512 1.761198 GAGGGTAAAGCGTATGGAGGT 59.239 52.381 0.00 0.00 0.00 3.85
4137 4518 3.915437 AAAGCGTATGGAGGTTTGTTG 57.085 42.857 0.00 0.00 37.82 3.33
4138 4519 2.561478 AGCGTATGGAGGTTTGTTGT 57.439 45.000 0.00 0.00 0.00 3.32
4139 4520 3.688694 AGCGTATGGAGGTTTGTTGTA 57.311 42.857 0.00 0.00 0.00 2.41
4140 4521 3.332034 AGCGTATGGAGGTTTGTTGTAC 58.668 45.455 0.00 0.00 0.00 2.90
4142 4523 3.666274 CGTATGGAGGTTTGTTGTACCA 58.334 45.455 0.00 0.00 38.16 3.25
4143 4524 3.682858 CGTATGGAGGTTTGTTGTACCAG 59.317 47.826 0.00 0.00 38.16 4.00
4144 4525 4.561938 CGTATGGAGGTTTGTTGTACCAGA 60.562 45.833 0.00 0.00 38.16 3.86
4145 4526 4.657814 ATGGAGGTTTGTTGTACCAGAT 57.342 40.909 0.00 0.00 38.16 2.90
4146 4527 5.772393 ATGGAGGTTTGTTGTACCAGATA 57.228 39.130 0.00 0.00 38.16 1.98
4147 4528 5.772393 TGGAGGTTTGTTGTACCAGATAT 57.228 39.130 0.00 0.00 38.16 1.63
4148 4529 5.741011 TGGAGGTTTGTTGTACCAGATATC 58.259 41.667 0.00 0.00 38.16 1.63
4149 4530 5.487488 TGGAGGTTTGTTGTACCAGATATCT 59.513 40.000 0.00 0.00 38.16 1.98
4150 4531 6.670464 TGGAGGTTTGTTGTACCAGATATCTA 59.330 38.462 4.54 0.00 38.16 1.98
4151 4532 7.181305 TGGAGGTTTGTTGTACCAGATATCTAA 59.819 37.037 4.54 0.00 38.16 2.10
4152 4533 7.494952 GGAGGTTTGTTGTACCAGATATCTAAC 59.505 40.741 4.54 6.64 38.16 2.34
4153 4534 8.147244 AGGTTTGTTGTACCAGATATCTAACT 57.853 34.615 4.54 0.00 38.16 2.24
4154 4535 8.041323 AGGTTTGTTGTACCAGATATCTAACTG 58.959 37.037 4.54 0.00 38.16 3.16
4161 4542 3.733337 CCAGATATCTAACTGGCACACC 58.267 50.000 4.54 0.00 45.30 4.16
4162 4543 3.134623 CCAGATATCTAACTGGCACACCA 59.865 47.826 4.54 0.00 45.30 4.17
4171 4552 3.412722 TGGCACACCAGATCGTTTT 57.587 47.368 0.00 0.00 42.67 2.43
4172 4553 1.686355 TGGCACACCAGATCGTTTTT 58.314 45.000 0.00 0.00 42.67 1.94
4173 4554 1.336440 TGGCACACCAGATCGTTTTTG 59.664 47.619 0.00 0.00 42.67 2.44
4174 4555 1.408422 GCACACCAGATCGTTTTTGC 58.592 50.000 0.00 0.00 0.00 3.68
4175 4556 1.673760 CACACCAGATCGTTTTTGCG 58.326 50.000 0.00 0.00 0.00 4.85
4176 4557 1.002900 CACACCAGATCGTTTTTGCGT 60.003 47.619 0.00 0.00 0.00 5.24
4177 4558 1.673920 ACACCAGATCGTTTTTGCGTT 59.326 42.857 0.00 0.00 0.00 4.84
4178 4559 2.098443 ACACCAGATCGTTTTTGCGTTT 59.902 40.909 0.00 0.00 0.00 3.60
4179 4560 3.112580 CACCAGATCGTTTTTGCGTTTT 58.887 40.909 0.00 0.00 0.00 2.43
4180 4561 3.061271 CACCAGATCGTTTTTGCGTTTTG 60.061 43.478 0.00 0.00 0.00 2.44
4181 4562 3.181495 ACCAGATCGTTTTTGCGTTTTGA 60.181 39.130 0.00 0.00 0.00 2.69
4182 4563 3.179599 CCAGATCGTTTTTGCGTTTTGAC 59.820 43.478 0.00 0.00 0.00 3.18
4183 4564 3.179599 CAGATCGTTTTTGCGTTTTGACC 59.820 43.478 0.00 0.00 0.00 4.02
4184 4565 1.536149 TCGTTTTTGCGTTTTGACCG 58.464 45.000 0.00 0.00 0.00 4.79
4185 4566 1.129998 TCGTTTTTGCGTTTTGACCGA 59.870 42.857 0.00 0.00 0.00 4.69
4186 4567 1.912110 CGTTTTTGCGTTTTGACCGAA 59.088 42.857 0.00 0.00 0.00 4.30
4187 4568 2.284007 CGTTTTTGCGTTTTGACCGAAC 60.284 45.455 0.00 0.00 0.00 3.95
4194 4575 2.274718 GTTTTGACCGAACGAACTCG 57.725 50.000 0.00 0.00 46.33 4.18
4195 4576 1.854126 GTTTTGACCGAACGAACTCGA 59.146 47.619 6.05 0.00 41.44 4.04
4196 4577 2.427232 TTTGACCGAACGAACTCGAT 57.573 45.000 6.05 0.00 41.44 3.59
4197 4578 1.693467 TTGACCGAACGAACTCGATG 58.307 50.000 6.05 0.00 41.44 3.84
4198 4579 0.731514 TGACCGAACGAACTCGATGC 60.732 55.000 6.05 0.00 41.44 3.91
4199 4580 0.456312 GACCGAACGAACTCGATGCT 60.456 55.000 6.05 0.00 41.44 3.79
4200 4581 0.732880 ACCGAACGAACTCGATGCTG 60.733 55.000 6.05 0.00 41.44 4.41
4201 4582 0.732880 CCGAACGAACTCGATGCTGT 60.733 55.000 6.05 0.00 41.44 4.40
4202 4583 1.060713 CGAACGAACTCGATGCTGTT 58.939 50.000 6.05 0.00 41.44 3.16
4203 4584 1.057847 CGAACGAACTCGATGCTGTTC 59.942 52.381 6.05 5.44 41.44 3.18
4204 4585 2.058798 GAACGAACTCGATGCTGTTCA 58.941 47.619 13.64 0.00 41.67 3.18
4205 4586 2.148916 ACGAACTCGATGCTGTTCAA 57.851 45.000 13.64 0.00 41.67 2.69
4206 4587 2.688507 ACGAACTCGATGCTGTTCAAT 58.311 42.857 13.64 1.21 41.67 2.57
4207 4588 2.668457 ACGAACTCGATGCTGTTCAATC 59.332 45.455 13.64 0.00 41.67 2.67
4208 4589 2.029728 CGAACTCGATGCTGTTCAATCC 59.970 50.000 13.64 0.00 41.67 3.01
4209 4590 1.645034 ACTCGATGCTGTTCAATCCG 58.355 50.000 0.00 0.00 0.00 4.18
4210 4591 0.933097 CTCGATGCTGTTCAATCCGG 59.067 55.000 0.00 0.00 0.00 5.14
4211 4592 0.534873 TCGATGCTGTTCAATCCGGA 59.465 50.000 6.61 6.61 0.00 5.14
4212 4593 1.138859 TCGATGCTGTTCAATCCGGAT 59.861 47.619 12.38 12.38 0.00 4.18
4213 4594 1.528586 CGATGCTGTTCAATCCGGATC 59.471 52.381 19.43 5.58 0.00 3.36
4214 4595 1.528586 GATGCTGTTCAATCCGGATCG 59.471 52.381 19.43 6.76 0.00 3.69
4215 4596 0.249120 TGCTGTTCAATCCGGATCGT 59.751 50.000 19.43 0.00 0.00 3.73
4216 4597 0.652592 GCTGTTCAATCCGGATCGTG 59.347 55.000 19.43 13.81 0.00 4.35
4217 4598 1.739035 GCTGTTCAATCCGGATCGTGA 60.739 52.381 19.43 16.14 0.00 4.35
4218 4599 1.927174 CTGTTCAATCCGGATCGTGAC 59.073 52.381 19.43 14.26 0.00 3.67
4219 4600 0.921347 GTTCAATCCGGATCGTGACG 59.079 55.000 19.43 0.00 0.00 4.35
4220 4601 0.804544 TTCAATCCGGATCGTGACGC 60.805 55.000 19.43 0.00 0.00 5.19
4221 4602 2.106332 AATCCGGATCGTGACGCC 59.894 61.111 19.43 0.00 0.00 5.68
4222 4603 2.717044 AATCCGGATCGTGACGCCA 61.717 57.895 19.43 0.00 0.00 5.69
4223 4604 2.901051 AATCCGGATCGTGACGCCAC 62.901 60.000 19.43 0.00 39.86 5.01
4224 4605 4.429212 CCGGATCGTGACGCCACA 62.429 66.667 0.00 0.00 43.34 4.17
4225 4606 2.431771 CGGATCGTGACGCCACAA 60.432 61.111 0.00 0.00 43.34 3.33
4226 4607 2.444624 CGGATCGTGACGCCACAAG 61.445 63.158 0.00 0.00 43.34 3.16
4227 4608 2.740714 GGATCGTGACGCCACAAGC 61.741 63.158 0.00 0.00 43.34 4.01
4228 4609 2.027073 GATCGTGACGCCACAAGCA 61.027 57.895 0.00 0.00 43.34 3.91
4229 4610 1.959899 GATCGTGACGCCACAAGCAG 61.960 60.000 0.00 0.00 43.34 4.24
4230 4611 4.374702 CGTGACGCCACAAGCAGC 62.375 66.667 1.96 0.00 43.34 5.25
4231 4612 4.030452 GTGACGCCACAAGCAGCC 62.030 66.667 0.00 0.00 44.04 4.85
4232 4613 4.254709 TGACGCCACAAGCAGCCT 62.255 61.111 0.00 0.00 44.04 4.58
4233 4614 3.426568 GACGCCACAAGCAGCCTC 61.427 66.667 0.00 0.00 44.04 4.70
4234 4615 4.254709 ACGCCACAAGCAGCCTCA 62.255 61.111 0.00 0.00 44.04 3.86
4235 4616 3.730761 CGCCACAAGCAGCCTCAC 61.731 66.667 0.00 0.00 44.04 3.51
4236 4617 3.730761 GCCACAAGCAGCCTCACG 61.731 66.667 0.00 0.00 42.97 4.35
4237 4618 3.730761 CCACAAGCAGCCTCACGC 61.731 66.667 0.00 0.00 37.98 5.34
4238 4619 3.730761 CACAAGCAGCCTCACGCC 61.731 66.667 0.00 0.00 38.78 5.68
4244 4625 4.569023 CAGCCTCACGCCGCGATA 62.569 66.667 21.79 5.69 38.78 2.92
4245 4626 4.570663 AGCCTCACGCCGCGATAC 62.571 66.667 21.79 3.91 38.78 2.24
4256 4637 3.231501 GCGATACGCGAACCCATC 58.768 61.111 15.93 6.24 44.55 3.51
4257 4638 1.299926 GCGATACGCGAACCCATCT 60.300 57.895 15.93 0.00 44.55 2.90
4258 4639 1.276145 GCGATACGCGAACCCATCTC 61.276 60.000 15.93 0.00 44.55 2.75
4259 4640 0.663568 CGATACGCGAACCCATCTCC 60.664 60.000 15.93 0.00 44.57 3.71
4260 4641 0.319641 GATACGCGAACCCATCTCCC 60.320 60.000 15.93 0.00 0.00 4.30
4261 4642 1.755393 ATACGCGAACCCATCTCCCC 61.755 60.000 15.93 0.00 0.00 4.81
4262 4643 4.547367 CGCGAACCCATCTCCCCC 62.547 72.222 0.00 0.00 0.00 5.40
4263 4644 3.407967 GCGAACCCATCTCCCCCA 61.408 66.667 0.00 0.00 0.00 4.96
4264 4645 2.978946 GCGAACCCATCTCCCCCAA 61.979 63.158 0.00 0.00 0.00 4.12
4265 4646 1.922821 CGAACCCATCTCCCCCAAT 59.077 57.895 0.00 0.00 0.00 3.16
4266 4647 0.258774 CGAACCCATCTCCCCCAATT 59.741 55.000 0.00 0.00 0.00 2.32
4267 4648 1.341976 CGAACCCATCTCCCCCAATTT 60.342 52.381 0.00 0.00 0.00 1.82
4268 4649 2.388735 GAACCCATCTCCCCCAATTTC 58.611 52.381 0.00 0.00 0.00 2.17
4269 4650 1.392407 ACCCATCTCCCCCAATTTCA 58.608 50.000 0.00 0.00 0.00 2.69
4270 4651 1.007118 ACCCATCTCCCCCAATTTCAC 59.993 52.381 0.00 0.00 0.00 3.18
4271 4652 1.689258 CCCATCTCCCCCAATTTCACC 60.689 57.143 0.00 0.00 0.00 4.02
4272 4653 1.689258 CCATCTCCCCCAATTTCACCC 60.689 57.143 0.00 0.00 0.00 4.61
4273 4654 0.636647 ATCTCCCCCAATTTCACCCC 59.363 55.000 0.00 0.00 0.00 4.95
4274 4655 1.379843 CTCCCCCAATTTCACCCCG 60.380 63.158 0.00 0.00 0.00 5.73
4275 4656 1.853095 TCCCCCAATTTCACCCCGA 60.853 57.895 0.00 0.00 0.00 5.14
4276 4657 1.077625 CCCCCAATTTCACCCCGAA 59.922 57.895 0.00 0.00 0.00 4.30
4278 4659 0.606096 CCCCAATTTCACCCCGAAAC 59.394 55.000 0.00 0.00 46.22 2.78
4279 4660 0.606096 CCCAATTTCACCCCGAAACC 59.394 55.000 0.00 0.00 46.22 3.27
4280 4661 0.606096 CCAATTTCACCCCGAAACCC 59.394 55.000 0.00 0.00 46.22 4.11
4281 4662 1.333177 CAATTTCACCCCGAAACCCA 58.667 50.000 0.00 0.00 46.22 4.51
4282 4663 1.899142 CAATTTCACCCCGAAACCCAT 59.101 47.619 0.00 0.00 46.22 4.00
4283 4664 2.301583 CAATTTCACCCCGAAACCCATT 59.698 45.455 0.00 0.00 46.22 3.16
4284 4665 2.089600 TTTCACCCCGAAACCCATTT 57.910 45.000 0.00 0.00 38.72 2.32
4285 4666 2.089600 TTCACCCCGAAACCCATTTT 57.910 45.000 0.00 0.00 0.00 1.82
4286 4667 1.623163 TCACCCCGAAACCCATTTTC 58.377 50.000 0.00 0.00 40.40 2.29
4287 4668 0.606096 CACCCCGAAACCCATTTTCC 59.394 55.000 0.00 0.00 40.67 3.13
4288 4669 0.896479 ACCCCGAAACCCATTTTCCG 60.896 55.000 0.00 0.00 40.67 4.30
4289 4670 1.214325 CCCGAAACCCATTTTCCGC 59.786 57.895 0.00 0.00 40.67 5.54
4290 4671 1.528292 CCCGAAACCCATTTTCCGCA 61.528 55.000 0.00 0.00 40.67 5.69
4291 4672 0.315568 CCGAAACCCATTTTCCGCAA 59.684 50.000 0.00 0.00 40.67 4.85
4292 4673 1.269831 CCGAAACCCATTTTCCGCAAA 60.270 47.619 0.00 0.00 40.67 3.68
4293 4674 1.790043 CGAAACCCATTTTCCGCAAAC 59.210 47.619 0.00 0.00 40.67 2.93
4294 4675 2.544903 CGAAACCCATTTTCCGCAAACT 60.545 45.455 0.00 0.00 40.67 2.66
4295 4676 2.812358 AACCCATTTTCCGCAAACTC 57.188 45.000 0.00 0.00 0.00 3.01
4296 4677 0.966179 ACCCATTTTCCGCAAACTCC 59.034 50.000 0.00 0.00 0.00 3.85
4297 4678 0.246360 CCCATTTTCCGCAAACTCCC 59.754 55.000 0.00 0.00 0.00 4.30
4298 4679 0.246360 CCATTTTCCGCAAACTCCCC 59.754 55.000 0.00 0.00 0.00 4.81
4299 4680 0.246360 CATTTTCCGCAAACTCCCCC 59.754 55.000 0.00 0.00 0.00 5.40
4330 4711 4.394712 CCGGACACCACAGGCCTC 62.395 72.222 0.00 0.00 0.00 4.70
4331 4712 4.394712 CGGACACCACAGGCCTCC 62.395 72.222 0.00 0.00 0.00 4.30
4332 4713 2.930562 GGACACCACAGGCCTCCT 60.931 66.667 0.00 0.00 0.00 3.69
4333 4714 2.665603 GACACCACAGGCCTCCTC 59.334 66.667 0.00 0.00 0.00 3.71
4334 4715 2.930562 ACACCACAGGCCTCCTCC 60.931 66.667 0.00 0.00 0.00 4.30
4335 4716 3.721706 CACCACAGGCCTCCTCCC 61.722 72.222 0.00 0.00 0.00 4.30
4379 4760 2.821366 CACAGGCAGTGGCGGATC 60.821 66.667 23.06 0.00 44.69 3.36
4380 4761 3.005539 ACAGGCAGTGGCGGATCT 61.006 61.111 23.06 0.00 42.47 2.75
4381 4762 1.685765 ACAGGCAGTGGCGGATCTA 60.686 57.895 23.06 0.00 42.47 1.98
4382 4763 1.068753 CAGGCAGTGGCGGATCTAG 59.931 63.158 11.46 0.00 42.47 2.43
4383 4764 2.136878 AGGCAGTGGCGGATCTAGG 61.137 63.158 11.51 0.00 42.47 3.02
4384 4765 2.134287 GGCAGTGGCGGATCTAGGA 61.134 63.158 0.00 0.00 42.47 2.94
4385 4766 1.476007 GGCAGTGGCGGATCTAGGAT 61.476 60.000 0.00 0.00 42.47 3.24
4386 4767 0.394565 GCAGTGGCGGATCTAGGATT 59.605 55.000 0.00 0.00 0.00 3.01
4387 4768 1.202698 GCAGTGGCGGATCTAGGATTT 60.203 52.381 0.00 0.00 0.00 2.17
4388 4769 2.760374 CAGTGGCGGATCTAGGATTTC 58.240 52.381 0.00 0.00 0.00 2.17
4389 4770 1.341531 AGTGGCGGATCTAGGATTTCG 59.658 52.381 0.00 0.00 0.00 3.46
4390 4771 1.340248 GTGGCGGATCTAGGATTTCGA 59.660 52.381 0.00 0.00 0.00 3.71
4391 4772 2.028930 GTGGCGGATCTAGGATTTCGAT 60.029 50.000 0.00 0.00 0.00 3.59
4392 4773 2.029020 TGGCGGATCTAGGATTTCGATG 60.029 50.000 0.00 0.00 0.00 3.84
4393 4774 1.996191 GCGGATCTAGGATTTCGATGC 59.004 52.381 0.00 0.00 0.00 3.91
4394 4775 2.610479 GCGGATCTAGGATTTCGATGCA 60.610 50.000 0.00 0.00 0.00 3.96
4395 4776 3.249091 CGGATCTAGGATTTCGATGCAG 58.751 50.000 0.00 0.00 0.00 4.41
4396 4777 3.594134 GGATCTAGGATTTCGATGCAGG 58.406 50.000 0.00 0.00 0.00 4.85
4397 4778 3.594134 GATCTAGGATTTCGATGCAGGG 58.406 50.000 0.00 0.00 0.00 4.45
4398 4779 2.398588 TCTAGGATTTCGATGCAGGGT 58.601 47.619 0.00 0.00 0.00 4.34
4399 4780 2.103094 TCTAGGATTTCGATGCAGGGTG 59.897 50.000 0.00 0.00 0.00 4.61
4400 4781 0.107017 AGGATTTCGATGCAGGGTGG 60.107 55.000 0.00 0.00 0.00 4.61
4401 4782 0.394352 GGATTTCGATGCAGGGTGGT 60.394 55.000 0.00 0.00 0.00 4.16
4402 4783 1.017387 GATTTCGATGCAGGGTGGTC 58.983 55.000 0.00 0.00 0.00 4.02
4403 4784 0.620556 ATTTCGATGCAGGGTGGTCT 59.379 50.000 0.00 0.00 0.00 3.85
4404 4785 0.321564 TTTCGATGCAGGGTGGTCTG 60.322 55.000 0.00 0.00 37.79 3.51
4413 4794 3.644966 CAGGGTGGTCTGCCTATAAAA 57.355 47.619 0.00 0.00 35.27 1.52
4414 4795 3.963129 CAGGGTGGTCTGCCTATAAAAA 58.037 45.455 0.00 0.00 35.27 1.94
4435 4816 4.519540 AAAATTGGCAACTAAGATGCGT 57.480 36.364 0.00 0.00 44.75 5.24
4436 4817 3.764885 AATTGGCAACTAAGATGCGTC 57.235 42.857 0.00 0.00 44.75 5.19
4437 4818 1.448985 TTGGCAACTAAGATGCGTCC 58.551 50.000 1.23 0.00 44.75 4.79
4438 4819 0.613260 TGGCAACTAAGATGCGTCCT 59.387 50.000 1.23 0.00 44.75 3.85
4439 4820 1.828595 TGGCAACTAAGATGCGTCCTA 59.171 47.619 1.23 0.00 44.75 2.94
4440 4821 2.235155 TGGCAACTAAGATGCGTCCTAA 59.765 45.455 1.23 0.00 44.75 2.69
4441 4822 3.118408 TGGCAACTAAGATGCGTCCTAAT 60.118 43.478 1.23 0.00 44.75 1.73
4442 4823 4.100344 TGGCAACTAAGATGCGTCCTAATA 59.900 41.667 1.23 0.00 44.75 0.98
4443 4824 5.221641 TGGCAACTAAGATGCGTCCTAATAT 60.222 40.000 1.23 0.00 44.75 1.28
4444 4825 5.120830 GGCAACTAAGATGCGTCCTAATATG 59.879 44.000 1.23 0.00 44.75 1.78
4445 4826 5.389935 GCAACTAAGATGCGTCCTAATATGC 60.390 44.000 1.23 3.57 33.57 3.14
4446 4827 5.468540 ACTAAGATGCGTCCTAATATGCA 57.531 39.130 1.23 0.00 45.01 3.96
4447 4828 5.853936 ACTAAGATGCGTCCTAATATGCAA 58.146 37.500 1.23 0.00 44.16 4.08
4448 4829 6.467677 ACTAAGATGCGTCCTAATATGCAAT 58.532 36.000 1.23 0.00 44.16 3.56
4449 4830 5.618056 AAGATGCGTCCTAATATGCAATG 57.382 39.130 1.23 0.00 44.16 2.82
4450 4831 3.438087 AGATGCGTCCTAATATGCAATGC 59.562 43.478 1.23 0.00 44.16 3.56
4451 4832 2.570135 TGCGTCCTAATATGCAATGCA 58.430 42.857 11.44 11.44 44.86 3.96
4452 4833 2.948315 TGCGTCCTAATATGCAATGCAA 59.052 40.909 13.45 1.99 43.62 4.08
4453 4834 3.379688 TGCGTCCTAATATGCAATGCAAA 59.620 39.130 13.45 0.00 43.62 3.68
4454 4835 3.730715 GCGTCCTAATATGCAATGCAAAC 59.269 43.478 13.45 1.61 43.62 2.93
4455 4836 4.733230 GCGTCCTAATATGCAATGCAAACA 60.733 41.667 13.45 0.40 43.62 2.83
4456 4837 4.971830 CGTCCTAATATGCAATGCAAACAG 59.028 41.667 13.45 7.23 43.62 3.16
4457 4838 5.284079 GTCCTAATATGCAATGCAAACAGG 58.716 41.667 13.45 15.85 43.62 4.00
4458 4839 5.067674 GTCCTAATATGCAATGCAAACAGGA 59.932 40.000 13.45 17.82 43.62 3.86
4459 4840 5.655974 TCCTAATATGCAATGCAAACAGGAA 59.344 36.000 21.06 10.44 43.62 3.36
4460 4841 6.324512 TCCTAATATGCAATGCAAACAGGAAT 59.675 34.615 21.06 4.32 43.62 3.01
4461 4842 6.987992 CCTAATATGCAATGCAAACAGGAATT 59.012 34.615 13.45 6.40 43.62 2.17
4462 4843 6.671614 AATATGCAATGCAAACAGGAATTG 57.328 33.333 13.45 0.00 43.62 2.32
4463 4844 2.768698 TGCAATGCAAACAGGAATTGG 58.231 42.857 5.01 0.00 34.76 3.16
4464 4845 1.465777 GCAATGCAAACAGGAATTGGC 59.534 47.619 0.00 0.00 0.00 4.52
4465 4846 2.872842 GCAATGCAAACAGGAATTGGCT 60.873 45.455 0.00 0.00 0.00 4.75
4466 4847 2.739913 CAATGCAAACAGGAATTGGCTG 59.260 45.455 0.00 0.00 0.00 4.85
4467 4848 0.680618 TGCAAACAGGAATTGGCTGG 59.319 50.000 0.00 0.00 0.00 4.85
4468 4849 0.968405 GCAAACAGGAATTGGCTGGA 59.032 50.000 0.00 0.00 0.00 3.86
4469 4850 1.551883 GCAAACAGGAATTGGCTGGAT 59.448 47.619 0.00 0.00 0.00 3.41
4470 4851 2.027837 GCAAACAGGAATTGGCTGGATT 60.028 45.455 0.00 0.00 0.00 3.01
4471 4852 3.557686 GCAAACAGGAATTGGCTGGATTT 60.558 43.478 0.00 0.00 0.00 2.17
4472 4853 4.644498 CAAACAGGAATTGGCTGGATTTT 58.356 39.130 0.00 0.00 0.00 1.82
4473 4854 4.980339 AACAGGAATTGGCTGGATTTTT 57.020 36.364 0.00 0.00 0.00 1.94
4474 4855 4.276058 ACAGGAATTGGCTGGATTTTTG 57.724 40.909 0.00 0.00 0.00 2.44
4475 4856 3.008266 ACAGGAATTGGCTGGATTTTTGG 59.992 43.478 0.00 0.00 0.00 3.28
4476 4857 3.261390 CAGGAATTGGCTGGATTTTTGGA 59.739 43.478 0.00 0.00 0.00 3.53
4477 4858 3.261643 AGGAATTGGCTGGATTTTTGGAC 59.738 43.478 0.00 0.00 0.00 4.02
4478 4859 3.007831 GGAATTGGCTGGATTTTTGGACA 59.992 43.478 0.00 0.00 0.00 4.02
4479 4860 3.683365 ATTGGCTGGATTTTTGGACAC 57.317 42.857 0.00 0.00 0.00 3.67
4480 4861 2.079170 TGGCTGGATTTTTGGACACA 57.921 45.000 0.00 0.00 0.00 3.72
4481 4862 2.392662 TGGCTGGATTTTTGGACACAA 58.607 42.857 0.00 0.00 34.07 3.33
4482 4863 2.768527 TGGCTGGATTTTTGGACACAAA 59.231 40.909 0.00 0.00 44.40 2.83
4483 4864 3.390639 TGGCTGGATTTTTGGACACAAAT 59.609 39.130 0.00 0.00 45.31 2.32
4484 4865 4.590647 TGGCTGGATTTTTGGACACAAATA 59.409 37.500 0.00 0.00 45.31 1.40
4485 4866 5.248020 TGGCTGGATTTTTGGACACAAATAT 59.752 36.000 0.00 0.00 45.31 1.28
4486 4867 5.581874 GGCTGGATTTTTGGACACAAATATG 59.418 40.000 0.00 0.00 45.31 1.78
4487 4868 5.063817 GCTGGATTTTTGGACACAAATATGC 59.936 40.000 7.71 7.71 45.31 3.14
4488 4869 6.106648 TGGATTTTTGGACACAAATATGCA 57.893 33.333 11.48 11.48 46.00 3.96
4489 4870 6.528321 TGGATTTTTGGACACAAATATGCAA 58.472 32.000 12.55 0.00 45.59 4.08
4490 4871 7.166851 TGGATTTTTGGACACAAATATGCAAT 58.833 30.769 12.55 2.51 45.59 3.56
4491 4872 8.316946 TGGATTTTTGGACACAAATATGCAATA 58.683 29.630 12.55 0.00 45.59 1.90
4492 4873 8.603181 GGATTTTTGGACACAAATATGCAATAC 58.397 33.333 0.00 0.00 45.31 1.89
4493 4874 9.149225 GATTTTTGGACACAAATATGCAATACA 57.851 29.630 0.00 0.00 45.31 2.29
4494 4875 8.531622 TTTTTGGACACAAATATGCAATACAG 57.468 30.769 0.00 0.00 45.31 2.74
4495 4876 6.832520 TTGGACACAAATATGCAATACAGT 57.167 33.333 0.00 0.00 32.66 3.55
4496 4877 6.193514 TGGACACAAATATGCAATACAGTG 57.806 37.500 9.50 9.50 35.54 3.66
4497 4878 5.125257 TGGACACAAATATGCAATACAGTGG 59.875 40.000 13.91 0.00 34.45 4.00
4498 4879 4.997565 ACACAAATATGCAATACAGTGGC 58.002 39.130 13.91 0.00 34.45 5.01
4499 4880 4.462132 ACACAAATATGCAATACAGTGGCA 59.538 37.500 13.91 0.00 42.43 4.92
4500 4881 5.047448 ACACAAATATGCAATACAGTGGCAA 60.047 36.000 13.91 0.00 41.43 4.52
4501 4882 5.868258 CACAAATATGCAATACAGTGGCAAA 59.132 36.000 0.00 0.00 41.43 3.68
4502 4883 6.368243 CACAAATATGCAATACAGTGGCAAAA 59.632 34.615 0.00 0.00 41.43 2.44
4503 4884 6.933521 ACAAATATGCAATACAGTGGCAAAAA 59.066 30.769 0.00 0.00 41.43 1.94
4573 4954 7.938140 TTATTCCACTAGAAATTGGGAAGTG 57.062 36.000 0.00 0.00 40.64 3.16
4574 4955 3.686016 TCCACTAGAAATTGGGAAGTGC 58.314 45.455 0.00 0.00 36.96 4.40
4575 4956 2.420022 CCACTAGAAATTGGGAAGTGCG 59.580 50.000 0.00 0.00 36.96 5.34
4576 4957 3.074412 CACTAGAAATTGGGAAGTGCGT 58.926 45.455 0.00 0.00 32.02 5.24
4577 4958 4.250464 CACTAGAAATTGGGAAGTGCGTA 58.750 43.478 0.00 0.00 32.02 4.42
4578 4959 4.092968 CACTAGAAATTGGGAAGTGCGTAC 59.907 45.833 0.00 0.00 32.02 3.67
4579 4960 3.418684 AGAAATTGGGAAGTGCGTACT 57.581 42.857 0.00 0.00 39.32 2.73
4580 4961 3.074412 AGAAATTGGGAAGTGCGTACTG 58.926 45.455 7.01 0.00 37.19 2.74
4581 4962 2.851263 AATTGGGAAGTGCGTACTGA 57.149 45.000 7.01 0.00 37.19 3.41
4582 4963 2.851263 ATTGGGAAGTGCGTACTGAA 57.149 45.000 7.01 0.00 37.19 3.02
4583 4964 2.163818 TTGGGAAGTGCGTACTGAAG 57.836 50.000 7.01 0.00 37.19 3.02
4584 4965 1.334160 TGGGAAGTGCGTACTGAAGA 58.666 50.000 7.01 0.00 37.19 2.87
4585 4966 1.000506 TGGGAAGTGCGTACTGAAGAC 59.999 52.381 7.01 0.00 37.19 3.01
4586 4967 1.000506 GGGAAGTGCGTACTGAAGACA 59.999 52.381 7.01 0.00 37.19 3.41
4587 4968 2.547218 GGGAAGTGCGTACTGAAGACAA 60.547 50.000 7.01 0.00 37.19 3.18
4588 4969 2.731976 GGAAGTGCGTACTGAAGACAAG 59.268 50.000 7.01 0.00 37.19 3.16
4589 4970 3.552273 GGAAGTGCGTACTGAAGACAAGA 60.552 47.826 7.01 0.00 37.19 3.02
4590 4971 3.290308 AGTGCGTACTGAAGACAAGAG 57.710 47.619 4.99 0.00 35.34 2.85
4591 4972 2.029828 AGTGCGTACTGAAGACAAGAGG 60.030 50.000 4.99 0.00 35.34 3.69
4592 4973 1.961394 TGCGTACTGAAGACAAGAGGT 59.039 47.619 0.00 0.00 0.00 3.85
4593 4974 2.288213 TGCGTACTGAAGACAAGAGGTG 60.288 50.000 0.00 0.00 0.00 4.00
4594 4975 2.927014 GCGTACTGAAGACAAGAGGTGG 60.927 54.545 0.00 0.00 0.00 4.61
4595 4976 2.352814 CGTACTGAAGACAAGAGGTGGG 60.353 54.545 0.00 0.00 0.00 4.61
4596 4977 0.398318 ACTGAAGACAAGAGGTGGGC 59.602 55.000 0.00 0.00 0.00 5.36
4597 4978 0.671781 CTGAAGACAAGAGGTGGGCG 60.672 60.000 0.00 0.00 0.00 6.13
4598 4979 1.376037 GAAGACAAGAGGTGGGCGG 60.376 63.158 0.00 0.00 0.00 6.13
4599 4980 3.553095 AAGACAAGAGGTGGGCGGC 62.553 63.158 0.00 0.00 0.00 6.53
4600 4981 4.021925 GACAAGAGGTGGGCGGCT 62.022 66.667 9.56 0.00 0.00 5.52
4601 4982 4.335647 ACAAGAGGTGGGCGGCTG 62.336 66.667 9.56 0.00 0.00 4.85
4607 4988 4.506255 GGTGGGCGGCTGGCTTAT 62.506 66.667 19.72 0.00 42.94 1.73
4608 4989 3.211963 GTGGGCGGCTGGCTTATG 61.212 66.667 19.72 0.00 42.94 1.90
4611 4992 3.589881 GGCGGCTGGCTTATGCAG 61.590 66.667 12.72 0.18 42.94 4.41
4612 4993 3.589881 GCGGCTGGCTTATGCAGG 61.590 66.667 2.72 0.00 41.91 4.85
4613 4994 2.124570 CGGCTGGCTTATGCAGGT 60.125 61.111 2.72 0.00 41.91 4.00
4614 4995 2.182842 CGGCTGGCTTATGCAGGTC 61.183 63.158 2.72 0.00 41.91 3.85
4615 4996 1.225704 GGCTGGCTTATGCAGGTCT 59.774 57.895 2.72 0.00 41.91 3.85
4616 4997 0.817229 GGCTGGCTTATGCAGGTCTC 60.817 60.000 2.72 0.00 41.91 3.36
4617 4998 0.817229 GCTGGCTTATGCAGGTCTCC 60.817 60.000 2.72 0.00 41.91 3.71
4618 4999 0.543277 CTGGCTTATGCAGGTCTCCA 59.457 55.000 2.72 0.00 41.91 3.86
4619 5000 0.253044 TGGCTTATGCAGGTCTCCAC 59.747 55.000 2.72 0.00 41.91 4.02
4620 5001 0.253044 GGCTTATGCAGGTCTCCACA 59.747 55.000 2.72 0.00 41.91 4.17
4621 5002 1.373570 GCTTATGCAGGTCTCCACAC 58.626 55.000 0.00 0.00 39.41 3.82
4622 5003 1.065854 GCTTATGCAGGTCTCCACACT 60.066 52.381 0.00 0.00 39.41 3.55
4623 5004 2.625737 CTTATGCAGGTCTCCACACTG 58.374 52.381 0.00 0.00 35.40 3.66
4624 5005 1.644509 TATGCAGGTCTCCACACTGT 58.355 50.000 0.00 0.00 34.79 3.55
4625 5006 0.322975 ATGCAGGTCTCCACACTGTC 59.677 55.000 0.00 0.00 34.79 3.51
4626 5007 1.373497 GCAGGTCTCCACACTGTCG 60.373 63.158 0.00 0.00 34.79 4.35
4627 5008 2.041976 CAGGTCTCCACACTGTCGT 58.958 57.895 0.00 0.00 0.00 4.34
4628 5009 0.039074 CAGGTCTCCACACTGTCGTC 60.039 60.000 0.00 0.00 0.00 4.20
4629 5010 0.467474 AGGTCTCCACACTGTCGTCA 60.467 55.000 0.00 0.00 0.00 4.35
4630 5011 0.039074 GGTCTCCACACTGTCGTCAG 60.039 60.000 8.17 8.17 46.18 3.51
4631 5012 0.664767 GTCTCCACACTGTCGTCAGC 60.665 60.000 9.67 0.00 44.77 4.26
4632 5013 0.823769 TCTCCACACTGTCGTCAGCT 60.824 55.000 9.67 0.00 44.77 4.24
4633 5014 0.665670 CTCCACACTGTCGTCAGCTG 60.666 60.000 7.63 7.63 44.77 4.24
4634 5015 2.313172 CCACACTGTCGTCAGCTGC 61.313 63.158 9.47 3.23 44.77 5.25
4635 5016 1.300465 CACACTGTCGTCAGCTGCT 60.300 57.895 9.47 0.00 44.77 4.24
4636 5017 1.300465 ACACTGTCGTCAGCTGCTG 60.300 57.895 23.31 23.31 44.77 4.41
4637 5018 2.025969 CACTGTCGTCAGCTGCTGG 61.026 63.158 27.79 14.02 44.77 4.85
4638 5019 2.203082 ACTGTCGTCAGCTGCTGGA 61.203 57.895 27.79 16.10 44.77 3.86
4639 5020 1.217511 CTGTCGTCAGCTGCTGGAT 59.782 57.895 27.79 0.00 34.79 3.41
4640 5021 0.457443 CTGTCGTCAGCTGCTGGATA 59.543 55.000 27.79 15.59 34.79 2.59
4641 5022 0.457443 TGTCGTCAGCTGCTGGATAG 59.543 55.000 27.79 16.53 31.51 2.08
4642 5023 0.249238 GTCGTCAGCTGCTGGATAGG 60.249 60.000 27.79 15.05 31.51 2.57
4643 5024 0.395724 TCGTCAGCTGCTGGATAGGA 60.396 55.000 27.79 16.97 31.51 2.94
4644 5025 0.249238 CGTCAGCTGCTGGATAGGAC 60.249 60.000 27.79 16.61 31.51 3.85
4645 5026 0.826715 GTCAGCTGCTGGATAGGACA 59.173 55.000 27.79 4.56 31.51 4.02
4646 5027 1.117994 TCAGCTGCTGGATAGGACAG 58.882 55.000 27.79 0.00 38.95 3.51
4676 5057 3.708734 GCGGTGCGTACTTTGCGT 61.709 61.111 3.01 0.00 34.24 5.24
4677 5058 2.468532 CGGTGCGTACTTTGCGTC 59.531 61.111 3.01 0.00 34.24 5.19
4678 5059 2.019951 CGGTGCGTACTTTGCGTCT 61.020 57.895 3.01 0.00 34.24 4.18
4679 5060 1.491563 GGTGCGTACTTTGCGTCTG 59.508 57.895 3.01 0.00 34.24 3.51
4680 5061 1.491563 GTGCGTACTTTGCGTCTGG 59.508 57.895 0.00 0.00 34.24 3.86
4681 5062 1.666553 TGCGTACTTTGCGTCTGGG 60.667 57.895 0.00 0.00 34.24 4.45
4682 5063 3.023591 GCGTACTTTGCGTCTGGGC 62.024 63.158 0.00 0.00 0.00 5.36
4683 5064 1.374252 CGTACTTTGCGTCTGGGCT 60.374 57.895 0.00 0.00 0.00 5.19
4684 5065 1.352156 CGTACTTTGCGTCTGGGCTC 61.352 60.000 0.00 0.00 0.00 4.70
4685 5066 1.080093 TACTTTGCGTCTGGGCTCG 60.080 57.895 0.00 0.00 0.00 5.03
4686 5067 2.501223 TACTTTGCGTCTGGGCTCGG 62.501 60.000 0.00 0.00 0.00 4.63
4715 5096 2.437897 CAGCCTTCTGCCCCTGTT 59.562 61.111 0.00 0.00 42.71 3.16
4716 5097 1.676967 CAGCCTTCTGCCCCTGTTC 60.677 63.158 0.00 0.00 42.71 3.18
4717 5098 2.747855 GCCTTCTGCCCCTGTTCG 60.748 66.667 0.00 0.00 0.00 3.95
4718 5099 2.747855 CCTTCTGCCCCTGTTCGC 60.748 66.667 0.00 0.00 0.00 4.70
4719 5100 2.032528 CTTCTGCCCCTGTTCGCA 59.967 61.111 0.00 0.00 0.00 5.10
4720 5101 2.281484 TTCTGCCCCTGTTCGCAC 60.281 61.111 0.00 0.00 0.00 5.34
4721 5102 2.738213 CTTCTGCCCCTGTTCGCACT 62.738 60.000 0.00 0.00 0.00 4.40
4722 5103 2.281761 CTGCCCCTGTTCGCACTT 60.282 61.111 0.00 0.00 0.00 3.16
4723 5104 2.594303 TGCCCCTGTTCGCACTTG 60.594 61.111 0.00 0.00 0.00 3.16
4724 5105 4.043200 GCCCCTGTTCGCACTTGC 62.043 66.667 0.00 0.00 37.78 4.01
4725 5106 3.365265 CCCCTGTTCGCACTTGCC 61.365 66.667 0.00 0.00 37.91 4.52
4726 5107 3.365265 CCCTGTTCGCACTTGCCC 61.365 66.667 0.00 0.00 37.91 5.36
4727 5108 3.726517 CCTGTTCGCACTTGCCCG 61.727 66.667 0.00 0.00 37.91 6.13
4728 5109 3.726517 CTGTTCGCACTTGCCCGG 61.727 66.667 0.00 0.00 37.91 5.73
4752 5133 2.596776 GCAGACTGGCCTTCTAGGA 58.403 57.895 3.32 0.00 37.67 2.94
4753 5134 0.463620 GCAGACTGGCCTTCTAGGAG 59.536 60.000 3.32 0.00 37.67 3.69
4754 5135 1.859302 CAGACTGGCCTTCTAGGAGT 58.141 55.000 3.32 0.00 37.67 3.85
4755 5136 1.754226 CAGACTGGCCTTCTAGGAGTC 59.246 57.143 3.32 6.67 38.71 3.36
4756 5137 1.116308 GACTGGCCTTCTAGGAGTCC 58.884 60.000 3.32 0.00 37.67 3.85
4757 5138 0.684805 ACTGGCCTTCTAGGAGTCCG 60.685 60.000 3.32 0.00 37.67 4.79
4758 5139 0.395862 CTGGCCTTCTAGGAGTCCGA 60.396 60.000 3.32 0.00 37.67 4.55
4759 5140 0.683504 TGGCCTTCTAGGAGTCCGAC 60.684 60.000 3.32 0.00 37.67 4.79
4760 5141 0.683504 GGCCTTCTAGGAGTCCGACA 60.684 60.000 2.76 0.00 37.67 4.35
4761 5142 1.183549 GCCTTCTAGGAGTCCGACAA 58.816 55.000 2.76 0.00 37.67 3.18
4762 5143 1.135053 GCCTTCTAGGAGTCCGACAAC 60.135 57.143 2.76 0.00 37.67 3.32
4763 5144 1.132643 CCTTCTAGGAGTCCGACAACG 59.867 57.143 2.76 0.00 37.67 4.10
4764 5145 2.082231 CTTCTAGGAGTCCGACAACGA 58.918 52.381 2.76 0.00 42.66 3.85
4765 5146 1.446907 TCTAGGAGTCCGACAACGAC 58.553 55.000 2.76 0.00 42.66 4.34
4766 5147 0.096628 CTAGGAGTCCGACAACGACG 59.903 60.000 2.76 0.00 42.66 5.12
4772 5153 4.289245 CCGACAACGACGGGTGGT 62.289 66.667 0.00 0.00 45.65 4.16
4773 5154 2.732094 CGACAACGACGGGTGGTC 60.732 66.667 0.00 6.38 44.77 4.02
4780 5161 4.065281 GACGGGTGGTCGGTGAGG 62.065 72.222 0.00 0.00 35.61 3.86
4783 5164 4.394712 GGGTGGTCGGTGAGGCAG 62.395 72.222 0.00 0.00 0.00 4.85
4784 5165 4.394712 GGTGGTCGGTGAGGCAGG 62.395 72.222 0.00 0.00 0.00 4.85
4785 5166 3.626924 GTGGTCGGTGAGGCAGGT 61.627 66.667 0.00 0.00 0.00 4.00
4786 5167 3.311110 TGGTCGGTGAGGCAGGTC 61.311 66.667 0.00 0.00 0.00 3.85
4787 5168 4.083862 GGTCGGTGAGGCAGGTCC 62.084 72.222 0.00 0.00 0.00 4.46
4788 5169 4.436998 GTCGGTGAGGCAGGTCCG 62.437 72.222 0.00 0.00 43.65 4.79
4791 5172 3.075005 GGTGAGGCAGGTCCGCTA 61.075 66.667 5.82 0.00 40.77 4.26
4792 5173 2.496817 GTGAGGCAGGTCCGCTAG 59.503 66.667 5.82 0.00 40.77 3.42
4793 5174 3.461773 TGAGGCAGGTCCGCTAGC 61.462 66.667 4.06 4.06 40.77 3.42
4794 5175 3.461773 GAGGCAGGTCCGCTAGCA 61.462 66.667 16.45 0.00 40.77 3.49
4795 5176 3.438017 GAGGCAGGTCCGCTAGCAG 62.438 68.421 16.45 2.92 40.77 4.24
4797 5178 4.154347 GCAGGTCCGCTAGCAGCT 62.154 66.667 16.45 8.29 39.60 4.24
4798 5179 2.581354 CAGGTCCGCTAGCAGCTT 59.419 61.111 16.45 0.00 39.60 3.74
4799 5180 1.812922 CAGGTCCGCTAGCAGCTTG 60.813 63.158 16.45 0.00 39.60 4.01
4800 5181 3.198489 GGTCCGCTAGCAGCTTGC 61.198 66.667 17.90 17.90 45.46 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.134521 GGTCACTTGCGGTCATATGGA 60.135 52.381 2.13 0.00 0.00 3.41
493 526 3.104843 AGGCGCAAATTTACAGCAAAA 57.895 38.095 10.83 0.00 0.00 2.44
647 680 4.281688 ACATCCCAAGACATGAAACAAAGG 59.718 41.667 0.00 0.00 0.00 3.11
926 1012 9.907229 AAACAAATTAACCACCAAAAATAAGGA 57.093 25.926 0.00 0.00 0.00 3.36
969 1060 2.677875 GGCAAGTCCCCTGGCAAG 60.678 66.667 0.00 0.00 39.63 4.01
1300 1392 7.783090 ATTCTAGTGTCATGAGCAACTTATG 57.217 36.000 10.09 0.00 0.00 1.90
1775 1909 6.992715 AGGTTCTAATATGGTATGACAAGTGC 59.007 38.462 0.00 0.00 0.00 4.40
1925 2059 2.115427 CTTCTTCCTCCTCCTCTTCCC 58.885 57.143 0.00 0.00 0.00 3.97
2046 2213 6.399639 TGTTTTAAATGTCCCTGTTCTTCC 57.600 37.500 0.00 0.00 0.00 3.46
2059 2226 6.991938 TCCAAATGTCCTCCTGTTTTAAATG 58.008 36.000 0.00 0.00 0.00 2.32
2104 2325 1.668419 CCCGTCATGGAAATGTCTCC 58.332 55.000 0.00 0.00 42.00 3.71
2105 2326 1.668419 CCCCGTCATGGAAATGTCTC 58.332 55.000 0.00 0.00 42.00 3.36
2751 3040 5.237996 TCTCACAATCTCACTCAAAGCTTTG 59.762 40.000 29.53 29.53 39.48 2.77
3367 3698 2.266554 CTGATCGAGTTGAGCAACCTC 58.733 52.381 9.56 6.32 43.57 3.85
3753 4102 4.385754 GGAGGGAGTATTTTCTTCCTGCAT 60.386 45.833 7.51 0.00 46.57 3.96
3873 4222 6.839124 TGACTGGATCAAAATAAAGCACAT 57.161 33.333 0.00 0.00 33.02 3.21
4026 4379 6.324254 TCCCTAAACAAGATAGAGTAAGGCTC 59.676 42.308 0.00 0.00 44.45 4.70
4029 4382 6.096564 ACGTCCCTAAACAAGATAGAGTAAGG 59.903 42.308 0.00 0.00 0.00 2.69
4030 4383 7.067251 AGACGTCCCTAAACAAGATAGAGTAAG 59.933 40.741 13.01 0.00 0.00 2.34
4067 4441 2.474410 AATCAGACGTCCCCACTTTC 57.526 50.000 13.01 0.00 0.00 2.62
4100 4481 3.374058 CGCTTTACCCTCCATACAAACAG 59.626 47.826 0.00 0.00 0.00 3.16
4153 4534 1.336440 CAAAAACGATCTGGTGTGCCA 59.664 47.619 0.00 0.00 43.73 4.92
4154 4535 1.930371 GCAAAAACGATCTGGTGTGCC 60.930 52.381 0.00 0.00 0.00 5.01
4155 4536 1.408422 GCAAAAACGATCTGGTGTGC 58.592 50.000 0.00 0.00 0.00 4.57
4156 4537 1.002900 ACGCAAAAACGATCTGGTGTG 60.003 47.619 0.00 0.00 36.70 3.82
4157 4538 1.305201 ACGCAAAAACGATCTGGTGT 58.695 45.000 0.00 0.00 36.70 4.16
4158 4539 2.399396 AACGCAAAAACGATCTGGTG 57.601 45.000 0.00 0.00 36.70 4.17
4159 4540 3.112580 CAAAACGCAAAAACGATCTGGT 58.887 40.909 0.00 0.00 36.70 4.00
4160 4541 3.179599 GTCAAAACGCAAAAACGATCTGG 59.820 43.478 0.00 0.00 36.70 3.86
4161 4542 3.179599 GGTCAAAACGCAAAAACGATCTG 59.820 43.478 0.00 0.00 36.70 2.90
4162 4543 3.368495 GGTCAAAACGCAAAAACGATCT 58.632 40.909 0.00 0.00 36.70 2.75
4163 4544 2.150424 CGGTCAAAACGCAAAAACGATC 59.850 45.455 0.00 0.00 36.70 3.69
4164 4545 2.113289 CGGTCAAAACGCAAAAACGAT 58.887 42.857 0.00 0.00 36.70 3.73
4165 4546 1.129998 TCGGTCAAAACGCAAAAACGA 59.870 42.857 0.00 0.00 36.70 3.85
4166 4547 1.536149 TCGGTCAAAACGCAAAAACG 58.464 45.000 0.00 0.00 39.50 3.60
4167 4548 2.284007 CGTTCGGTCAAAACGCAAAAAC 60.284 45.455 0.00 0.00 42.40 2.43
4168 4549 1.912110 CGTTCGGTCAAAACGCAAAAA 59.088 42.857 0.00 0.00 42.40 1.94
4169 4550 1.129998 TCGTTCGGTCAAAACGCAAAA 59.870 42.857 3.68 0.00 46.78 2.44
4170 4551 0.725686 TCGTTCGGTCAAAACGCAAA 59.274 45.000 3.68 0.00 46.78 3.68
4171 4552 0.725686 TTCGTTCGGTCAAAACGCAA 59.274 45.000 3.68 0.00 46.78 4.85
4172 4553 0.026544 GTTCGTTCGGTCAAAACGCA 59.973 50.000 3.68 0.00 46.78 5.24
4173 4554 0.302589 AGTTCGTTCGGTCAAAACGC 59.697 50.000 3.68 0.00 46.78 4.84
4175 4556 1.854126 TCGAGTTCGTTCGGTCAAAAC 59.146 47.619 1.07 0.00 40.83 2.43
4176 4557 2.206815 TCGAGTTCGTTCGGTCAAAA 57.793 45.000 1.07 0.00 40.83 2.44
4177 4558 2.055838 CATCGAGTTCGTTCGGTCAAA 58.944 47.619 1.07 0.00 40.83 2.69
4178 4559 1.693467 CATCGAGTTCGTTCGGTCAA 58.307 50.000 1.07 0.00 40.83 3.18
4179 4560 0.731514 GCATCGAGTTCGTTCGGTCA 60.732 55.000 1.07 0.00 40.83 4.02
4180 4561 0.456312 AGCATCGAGTTCGTTCGGTC 60.456 55.000 1.07 0.00 40.83 4.79
4181 4562 0.732880 CAGCATCGAGTTCGTTCGGT 60.733 55.000 1.07 0.00 40.83 4.69
4182 4563 0.732880 ACAGCATCGAGTTCGTTCGG 60.733 55.000 1.07 0.00 40.83 4.30
4183 4564 1.057847 GAACAGCATCGAGTTCGTTCG 59.942 52.381 1.07 1.40 41.79 3.95
4184 4565 2.058798 TGAACAGCATCGAGTTCGTTC 58.941 47.619 9.79 10.69 45.34 3.95
4185 4566 2.148916 TGAACAGCATCGAGTTCGTT 57.851 45.000 9.79 2.55 45.34 3.85
4186 4567 2.148916 TTGAACAGCATCGAGTTCGT 57.851 45.000 9.79 0.00 45.34 3.85
4187 4568 2.029728 GGATTGAACAGCATCGAGTTCG 59.970 50.000 9.79 0.00 45.34 3.95
4188 4569 2.029728 CGGATTGAACAGCATCGAGTTC 59.970 50.000 8.01 8.01 43.31 3.01
4189 4570 2.002586 CGGATTGAACAGCATCGAGTT 58.997 47.619 0.00 0.00 0.00 3.01
4190 4571 1.645034 CGGATTGAACAGCATCGAGT 58.355 50.000 0.00 0.00 0.00 4.18
4191 4572 0.933097 CCGGATTGAACAGCATCGAG 59.067 55.000 0.00 0.00 0.00 4.04
4192 4573 0.534873 TCCGGATTGAACAGCATCGA 59.465 50.000 0.00 0.00 0.00 3.59
4193 4574 1.528586 GATCCGGATTGAACAGCATCG 59.471 52.381 20.22 0.00 0.00 3.84
4194 4575 1.528586 CGATCCGGATTGAACAGCATC 59.471 52.381 25.38 5.06 0.00 3.91
4195 4576 1.134401 ACGATCCGGATTGAACAGCAT 60.134 47.619 34.04 10.49 0.00 3.79
4196 4577 0.249120 ACGATCCGGATTGAACAGCA 59.751 50.000 34.04 0.00 0.00 4.41
4197 4578 0.652592 CACGATCCGGATTGAACAGC 59.347 55.000 34.04 12.37 0.00 4.40
4198 4579 1.927174 GTCACGATCCGGATTGAACAG 59.073 52.381 34.04 20.57 0.00 3.16
4199 4580 1.734377 CGTCACGATCCGGATTGAACA 60.734 52.381 34.04 16.23 0.00 3.18
4200 4581 0.921347 CGTCACGATCCGGATTGAAC 59.079 55.000 34.04 27.04 0.00 3.18
4201 4582 0.804544 GCGTCACGATCCGGATTGAA 60.805 55.000 34.04 20.02 0.00 2.69
4202 4583 1.226859 GCGTCACGATCCGGATTGA 60.227 57.895 34.04 23.99 0.00 2.57
4203 4584 2.237751 GGCGTCACGATCCGGATTG 61.238 63.158 27.31 27.31 0.00 2.67
4204 4585 2.106332 GGCGTCACGATCCGGATT 59.894 61.111 20.22 0.00 0.00 3.01
4205 4586 3.144871 TGGCGTCACGATCCGGAT 61.145 61.111 19.21 19.21 0.00 4.18
4206 4587 4.124351 GTGGCGTCACGATCCGGA 62.124 66.667 6.61 6.61 33.87 5.14
4207 4588 3.925362 TTGTGGCGTCACGATCCGG 62.925 63.158 16.50 0.00 46.42 5.14
4208 4589 2.431771 TTGTGGCGTCACGATCCG 60.432 61.111 16.50 0.00 46.42 4.18
4209 4590 2.740714 GCTTGTGGCGTCACGATCC 61.741 63.158 16.50 4.08 46.42 3.36
4210 4591 1.959899 CTGCTTGTGGCGTCACGATC 61.960 60.000 16.50 10.15 46.42 3.69
4211 4592 2.029288 CTGCTTGTGGCGTCACGAT 61.029 57.895 16.50 0.00 46.42 3.73
4212 4593 2.661537 CTGCTTGTGGCGTCACGA 60.662 61.111 16.50 13.38 46.42 4.35
4213 4594 4.374702 GCTGCTTGTGGCGTCACG 62.375 66.667 16.50 2.86 46.42 4.35
4214 4595 4.030452 GGCTGCTTGTGGCGTCAC 62.030 66.667 14.58 14.58 45.43 3.67
4215 4596 4.254709 AGGCTGCTTGTGGCGTCA 62.255 61.111 0.00 0.00 45.43 4.35
4216 4597 3.426568 GAGGCTGCTTGTGGCGTC 61.427 66.667 0.00 0.00 45.43 5.19
4217 4598 4.254709 TGAGGCTGCTTGTGGCGT 62.255 61.111 0.00 0.00 45.43 5.68
4218 4599 3.730761 GTGAGGCTGCTTGTGGCG 61.731 66.667 0.00 0.00 45.43 5.69
4219 4600 3.730761 CGTGAGGCTGCTTGTGGC 61.731 66.667 0.00 0.00 42.22 5.01
4220 4601 3.730761 GCGTGAGGCTGCTTGTGG 61.731 66.667 0.00 0.00 39.11 4.17
4240 4621 0.663568 GGAGATGGGTTCGCGTATCG 60.664 60.000 5.77 0.00 40.15 2.92
4241 4622 0.319641 GGGAGATGGGTTCGCGTATC 60.320 60.000 5.77 0.00 0.00 2.24
4242 4623 1.746517 GGGAGATGGGTTCGCGTAT 59.253 57.895 5.77 0.00 0.00 3.06
4243 4624 2.428925 GGGGAGATGGGTTCGCGTA 61.429 63.158 5.77 0.00 0.00 4.42
4244 4625 3.782443 GGGGAGATGGGTTCGCGT 61.782 66.667 5.77 0.00 0.00 6.01
4245 4626 4.547367 GGGGGAGATGGGTTCGCG 62.547 72.222 0.00 0.00 0.00 5.87
4246 4627 2.284515 ATTGGGGGAGATGGGTTCGC 62.285 60.000 0.00 0.00 0.00 4.70
4247 4628 0.258774 AATTGGGGGAGATGGGTTCG 59.741 55.000 0.00 0.00 0.00 3.95
4248 4629 2.292192 TGAAATTGGGGGAGATGGGTTC 60.292 50.000 0.00 0.00 0.00 3.62
4249 4630 1.721691 TGAAATTGGGGGAGATGGGTT 59.278 47.619 0.00 0.00 0.00 4.11
4250 4631 1.007118 GTGAAATTGGGGGAGATGGGT 59.993 52.381 0.00 0.00 0.00 4.51
4251 4632 1.689258 GGTGAAATTGGGGGAGATGGG 60.689 57.143 0.00 0.00 0.00 4.00
4252 4633 1.689258 GGGTGAAATTGGGGGAGATGG 60.689 57.143 0.00 0.00 0.00 3.51
4253 4634 1.689258 GGGGTGAAATTGGGGGAGATG 60.689 57.143 0.00 0.00 0.00 2.90
4254 4635 0.636647 GGGGTGAAATTGGGGGAGAT 59.363 55.000 0.00 0.00 0.00 2.75
4255 4636 1.858739 CGGGGTGAAATTGGGGGAGA 61.859 60.000 0.00 0.00 0.00 3.71
4256 4637 1.379843 CGGGGTGAAATTGGGGGAG 60.380 63.158 0.00 0.00 0.00 4.30
4257 4638 1.436179 TTCGGGGTGAAATTGGGGGA 61.436 55.000 0.00 0.00 32.37 4.81
4258 4639 0.543174 TTTCGGGGTGAAATTGGGGG 60.543 55.000 0.00 0.00 41.59 5.40
4259 4640 3.059287 TTTCGGGGTGAAATTGGGG 57.941 52.632 0.00 0.00 41.59 4.96
4265 4646 2.089600 AAATGGGTTTCGGGGTGAAA 57.910 45.000 0.00 0.00 44.19 2.69
4266 4647 1.964933 GAAAATGGGTTTCGGGGTGAA 59.035 47.619 0.00 0.00 36.52 3.18
4267 4648 1.623163 GAAAATGGGTTTCGGGGTGA 58.377 50.000 0.00 0.00 36.52 4.02
4268 4649 0.606096 GGAAAATGGGTTTCGGGGTG 59.394 55.000 0.00 0.00 45.74 4.61
4269 4650 0.896479 CGGAAAATGGGTTTCGGGGT 60.896 55.000 0.00 0.00 45.74 4.95
4270 4651 1.887301 CGGAAAATGGGTTTCGGGG 59.113 57.895 0.00 0.00 45.74 5.73
4271 4652 1.214325 GCGGAAAATGGGTTTCGGG 59.786 57.895 8.02 0.00 45.74 5.14
4272 4653 0.315568 TTGCGGAAAATGGGTTTCGG 59.684 50.000 0.00 2.93 45.74 4.30
4273 4654 1.790043 GTTTGCGGAAAATGGGTTTCG 59.210 47.619 2.79 0.00 45.74 3.46
4274 4655 3.057019 GAGTTTGCGGAAAATGGGTTTC 58.943 45.455 7.19 0.00 44.31 2.78
4275 4656 2.224185 GGAGTTTGCGGAAAATGGGTTT 60.224 45.455 7.19 0.00 0.00 3.27
4276 4657 1.343142 GGAGTTTGCGGAAAATGGGTT 59.657 47.619 7.19 0.00 0.00 4.11
4277 4658 0.966179 GGAGTTTGCGGAAAATGGGT 59.034 50.000 7.19 0.00 0.00 4.51
4278 4659 0.246360 GGGAGTTTGCGGAAAATGGG 59.754 55.000 7.19 0.00 0.00 4.00
4279 4660 0.246360 GGGGAGTTTGCGGAAAATGG 59.754 55.000 7.19 0.00 0.00 3.16
4280 4661 0.246360 GGGGGAGTTTGCGGAAAATG 59.754 55.000 7.19 0.00 0.00 2.32
4281 4662 2.666085 GGGGGAGTTTGCGGAAAAT 58.334 52.632 2.79 1.81 0.00 1.82
4282 4663 4.184439 GGGGGAGTTTGCGGAAAA 57.816 55.556 2.79 0.00 0.00 2.29
4313 4694 4.394712 GAGGCCTGTGGTGTCCGG 62.395 72.222 12.00 0.00 0.00 5.14
4314 4695 4.394712 GGAGGCCTGTGGTGTCCG 62.395 72.222 12.00 0.00 0.00 4.79
4315 4696 2.930562 AGGAGGCCTGTGGTGTCC 60.931 66.667 12.00 2.58 29.57 4.02
4316 4697 2.665603 GAGGAGGCCTGTGGTGTC 59.334 66.667 12.00 0.00 31.76 3.67
4317 4698 2.930562 GGAGGAGGCCTGTGGTGT 60.931 66.667 12.00 0.00 31.76 4.16
4318 4699 3.721706 GGGAGGAGGCCTGTGGTG 61.722 72.222 12.00 0.00 31.76 4.17
4352 4733 4.584518 TGCCTGTGGTGCCCAGTG 62.585 66.667 0.00 0.00 32.34 3.66
4353 4734 4.275508 CTGCCTGTGGTGCCCAGT 62.276 66.667 0.00 0.00 32.34 4.00
4354 4735 4.275508 ACTGCCTGTGGTGCCCAG 62.276 66.667 0.00 0.00 32.34 4.45
4355 4736 4.584518 CACTGCCTGTGGTGCCCA 62.585 66.667 0.00 0.00 42.68 5.36
4362 4743 1.960040 TAGATCCGCCACTGCCTGTG 61.960 60.000 0.00 0.00 45.80 3.66
4363 4744 1.680522 CTAGATCCGCCACTGCCTGT 61.681 60.000 0.00 0.00 0.00 4.00
4364 4745 1.068753 CTAGATCCGCCACTGCCTG 59.931 63.158 0.00 0.00 0.00 4.85
4365 4746 2.136878 CCTAGATCCGCCACTGCCT 61.137 63.158 0.00 0.00 0.00 4.75
4366 4747 1.476007 ATCCTAGATCCGCCACTGCC 61.476 60.000 0.00 0.00 0.00 4.85
4367 4748 0.394565 AATCCTAGATCCGCCACTGC 59.605 55.000 0.00 0.00 0.00 4.40
4368 4749 2.760374 GAAATCCTAGATCCGCCACTG 58.240 52.381 0.00 0.00 0.00 3.66
4369 4750 1.341531 CGAAATCCTAGATCCGCCACT 59.658 52.381 0.00 0.00 0.00 4.00
4370 4751 1.340248 TCGAAATCCTAGATCCGCCAC 59.660 52.381 0.00 0.00 0.00 5.01
4371 4752 1.699730 TCGAAATCCTAGATCCGCCA 58.300 50.000 0.00 0.00 0.00 5.69
4372 4753 2.611518 CATCGAAATCCTAGATCCGCC 58.388 52.381 0.00 0.00 0.00 6.13
4373 4754 1.996191 GCATCGAAATCCTAGATCCGC 59.004 52.381 0.00 0.00 0.00 5.54
4374 4755 3.249091 CTGCATCGAAATCCTAGATCCG 58.751 50.000 0.00 0.00 0.00 4.18
4375 4756 3.594134 CCTGCATCGAAATCCTAGATCC 58.406 50.000 0.00 0.00 0.00 3.36
4376 4757 3.007398 ACCCTGCATCGAAATCCTAGATC 59.993 47.826 0.00 0.00 0.00 2.75
4377 4758 2.975489 ACCCTGCATCGAAATCCTAGAT 59.025 45.455 0.00 0.00 0.00 1.98
4378 4759 2.103094 CACCCTGCATCGAAATCCTAGA 59.897 50.000 0.00 0.00 0.00 2.43
4379 4760 2.487934 CACCCTGCATCGAAATCCTAG 58.512 52.381 0.00 0.00 0.00 3.02
4380 4761 1.140852 CCACCCTGCATCGAAATCCTA 59.859 52.381 0.00 0.00 0.00 2.94
4381 4762 0.107017 CCACCCTGCATCGAAATCCT 60.107 55.000 0.00 0.00 0.00 3.24
4382 4763 0.394352 ACCACCCTGCATCGAAATCC 60.394 55.000 0.00 0.00 0.00 3.01
4383 4764 1.017387 GACCACCCTGCATCGAAATC 58.983 55.000 0.00 0.00 0.00 2.17
4384 4765 0.620556 AGACCACCCTGCATCGAAAT 59.379 50.000 0.00 0.00 0.00 2.17
4385 4766 0.321564 CAGACCACCCTGCATCGAAA 60.322 55.000 0.00 0.00 0.00 3.46
4386 4767 1.296392 CAGACCACCCTGCATCGAA 59.704 57.895 0.00 0.00 0.00 3.71
4387 4768 2.981302 CAGACCACCCTGCATCGA 59.019 61.111 0.00 0.00 0.00 3.59
4393 4774 3.644966 TTTTATAGGCAGACCACCCTG 57.355 47.619 0.00 0.00 39.06 4.45
4413 4794 4.881920 ACGCATCTTAGTTGCCAATTTTT 58.118 34.783 9.37 0.00 36.75 1.94
4414 4795 4.485163 GACGCATCTTAGTTGCCAATTTT 58.515 39.130 9.37 0.00 36.75 1.82
4415 4796 3.119495 GGACGCATCTTAGTTGCCAATTT 60.119 43.478 9.37 0.00 36.75 1.82
4416 4797 2.423538 GGACGCATCTTAGTTGCCAATT 59.576 45.455 9.37 0.00 36.75 2.32
4417 4798 2.017049 GGACGCATCTTAGTTGCCAAT 58.983 47.619 9.37 0.00 36.75 3.16
4418 4799 1.003118 AGGACGCATCTTAGTTGCCAA 59.997 47.619 9.37 0.00 36.75 4.52
4419 4800 0.613260 AGGACGCATCTTAGTTGCCA 59.387 50.000 9.37 0.00 36.75 4.92
4420 4801 2.596904 TAGGACGCATCTTAGTTGCC 57.403 50.000 9.37 0.00 36.75 4.52
4421 4802 5.389935 GCATATTAGGACGCATCTTAGTTGC 60.390 44.000 5.28 5.28 36.74 4.17
4422 4803 5.696270 TGCATATTAGGACGCATCTTAGTTG 59.304 40.000 0.00 0.00 0.00 3.16
4423 4804 5.853936 TGCATATTAGGACGCATCTTAGTT 58.146 37.500 0.00 0.00 0.00 2.24
4424 4805 5.468540 TGCATATTAGGACGCATCTTAGT 57.531 39.130 0.00 0.00 0.00 2.24
4425 4806 6.674037 GCATTGCATATTAGGACGCATCTTAG 60.674 42.308 3.15 0.00 33.71 2.18
4426 4807 5.122239 GCATTGCATATTAGGACGCATCTTA 59.878 40.000 3.15 0.00 33.71 2.10
4427 4808 4.083110 GCATTGCATATTAGGACGCATCTT 60.083 41.667 3.15 0.00 33.71 2.40
4428 4809 3.438087 GCATTGCATATTAGGACGCATCT 59.562 43.478 3.15 0.00 33.71 2.90
4429 4810 3.189080 TGCATTGCATATTAGGACGCATC 59.811 43.478 7.38 0.00 33.71 3.91
4430 4811 3.148412 TGCATTGCATATTAGGACGCAT 58.852 40.909 7.38 0.00 33.71 4.73
4431 4812 2.570135 TGCATTGCATATTAGGACGCA 58.430 42.857 7.38 0.00 31.71 5.24
4432 4813 3.624326 TTGCATTGCATATTAGGACGC 57.376 42.857 12.95 0.00 38.76 5.19
4433 4814 4.919206 TGTTTGCATTGCATATTAGGACG 58.081 39.130 12.95 0.00 38.76 4.79
4434 4815 5.067674 TCCTGTTTGCATTGCATATTAGGAC 59.932 40.000 22.21 11.43 38.76 3.85
4435 4816 5.199723 TCCTGTTTGCATTGCATATTAGGA 58.800 37.500 22.21 22.21 38.76 2.94
4436 4817 5.518848 TCCTGTTTGCATTGCATATTAGG 57.481 39.130 12.95 17.42 38.76 2.69
4437 4818 7.042321 CCAATTCCTGTTTGCATTGCATATTAG 60.042 37.037 12.95 10.02 38.76 1.73
4438 4819 6.762187 CCAATTCCTGTTTGCATTGCATATTA 59.238 34.615 12.95 0.00 38.76 0.98
4439 4820 5.587043 CCAATTCCTGTTTGCATTGCATATT 59.413 36.000 12.95 1.97 38.76 1.28
4440 4821 5.120399 CCAATTCCTGTTTGCATTGCATAT 58.880 37.500 12.95 0.00 38.76 1.78
4441 4822 4.505808 CCAATTCCTGTTTGCATTGCATA 58.494 39.130 12.95 4.75 38.76 3.14
4442 4823 3.340034 CCAATTCCTGTTTGCATTGCAT 58.660 40.909 12.95 0.00 38.76 3.96
4443 4824 2.768698 CCAATTCCTGTTTGCATTGCA 58.231 42.857 7.38 7.38 36.47 4.08
4444 4825 1.465777 GCCAATTCCTGTTTGCATTGC 59.534 47.619 0.46 0.46 0.00 3.56
4445 4826 2.739913 CAGCCAATTCCTGTTTGCATTG 59.260 45.455 0.00 0.00 0.00 2.82
4446 4827 2.289819 CCAGCCAATTCCTGTTTGCATT 60.290 45.455 0.00 0.00 0.00 3.56
4447 4828 1.276989 CCAGCCAATTCCTGTTTGCAT 59.723 47.619 0.00 0.00 0.00 3.96
4448 4829 0.680618 CCAGCCAATTCCTGTTTGCA 59.319 50.000 0.00 0.00 0.00 4.08
4449 4830 0.968405 TCCAGCCAATTCCTGTTTGC 59.032 50.000 2.87 0.00 0.00 3.68
4450 4831 3.967332 AATCCAGCCAATTCCTGTTTG 57.033 42.857 2.87 0.00 0.00 2.93
4451 4832 4.980339 AAAATCCAGCCAATTCCTGTTT 57.020 36.364 2.87 0.00 0.00 2.83
4452 4833 4.505390 CCAAAAATCCAGCCAATTCCTGTT 60.505 41.667 2.87 0.00 0.00 3.16
4453 4834 3.008266 CCAAAAATCCAGCCAATTCCTGT 59.992 43.478 2.87 0.00 0.00 4.00
4454 4835 3.261390 TCCAAAAATCCAGCCAATTCCTG 59.739 43.478 0.00 0.00 0.00 3.86
4455 4836 3.261643 GTCCAAAAATCCAGCCAATTCCT 59.738 43.478 0.00 0.00 0.00 3.36
4456 4837 3.007831 TGTCCAAAAATCCAGCCAATTCC 59.992 43.478 0.00 0.00 0.00 3.01
4457 4838 3.996363 GTGTCCAAAAATCCAGCCAATTC 59.004 43.478 0.00 0.00 0.00 2.17
4458 4839 3.390639 TGTGTCCAAAAATCCAGCCAATT 59.609 39.130 0.00 0.00 0.00 2.32
4459 4840 2.971330 TGTGTCCAAAAATCCAGCCAAT 59.029 40.909 0.00 0.00 0.00 3.16
4460 4841 2.392662 TGTGTCCAAAAATCCAGCCAA 58.607 42.857 0.00 0.00 0.00 4.52
4461 4842 2.079170 TGTGTCCAAAAATCCAGCCA 57.921 45.000 0.00 0.00 0.00 4.75
4462 4843 3.467374 TTTGTGTCCAAAAATCCAGCC 57.533 42.857 0.00 0.00 37.62 4.85
4463 4844 5.063817 GCATATTTGTGTCCAAAAATCCAGC 59.936 40.000 0.00 0.19 43.43 4.85
4464 4845 6.164876 TGCATATTTGTGTCCAAAAATCCAG 58.835 36.000 0.00 0.00 43.43 3.86
4465 4846 6.106648 TGCATATTTGTGTCCAAAAATCCA 57.893 33.333 0.00 0.00 43.43 3.41
4466 4847 7.614124 ATTGCATATTTGTGTCCAAAAATCC 57.386 32.000 0.00 0.00 43.43 3.01
4467 4848 9.149225 TGTATTGCATATTTGTGTCCAAAAATC 57.851 29.630 0.00 0.00 43.43 2.17
4468 4849 9.153721 CTGTATTGCATATTTGTGTCCAAAAAT 57.846 29.630 1.36 1.36 43.43 1.82
4469 4850 8.147058 ACTGTATTGCATATTTGTGTCCAAAAA 58.853 29.630 0.00 0.00 43.43 1.94
4470 4851 7.598118 CACTGTATTGCATATTTGTGTCCAAAA 59.402 33.333 0.00 0.00 43.43 2.44
4471 4852 7.089538 CACTGTATTGCATATTTGTGTCCAAA 58.910 34.615 0.00 0.00 44.27 3.28
4472 4853 6.350027 CCACTGTATTGCATATTTGTGTCCAA 60.350 38.462 0.00 0.00 0.00 3.53
4473 4854 5.125257 CCACTGTATTGCATATTTGTGTCCA 59.875 40.000 0.00 0.00 0.00 4.02
4474 4855 5.581605 CCACTGTATTGCATATTTGTGTCC 58.418 41.667 0.00 0.00 0.00 4.02
4475 4856 5.036737 GCCACTGTATTGCATATTTGTGTC 58.963 41.667 0.00 0.00 0.00 3.67
4476 4857 4.462132 TGCCACTGTATTGCATATTTGTGT 59.538 37.500 0.00 0.00 0.00 3.72
4477 4858 4.996344 TGCCACTGTATTGCATATTTGTG 58.004 39.130 0.00 0.00 0.00 3.33
4478 4859 5.657826 TTGCCACTGTATTGCATATTTGT 57.342 34.783 0.00 0.00 34.51 2.83
4479 4860 6.964741 TTTTGCCACTGTATTGCATATTTG 57.035 33.333 0.00 0.00 34.51 2.32
4547 4928 8.971073 CACTTCCCAATTTCTAGTGGAATAATT 58.029 33.333 0.00 0.00 42.09 1.40
4548 4929 7.068716 GCACTTCCCAATTTCTAGTGGAATAAT 59.931 37.037 0.00 0.00 42.09 1.28
4549 4930 6.377146 GCACTTCCCAATTTCTAGTGGAATAA 59.623 38.462 0.00 0.00 42.09 1.40
4550 4931 5.885912 GCACTTCCCAATTTCTAGTGGAATA 59.114 40.000 0.00 0.00 42.09 1.75
4551 4932 4.706962 GCACTTCCCAATTTCTAGTGGAAT 59.293 41.667 0.00 0.00 42.09 3.01
4552 4933 4.079253 GCACTTCCCAATTTCTAGTGGAA 58.921 43.478 0.00 0.00 42.09 3.53
4553 4934 3.686016 GCACTTCCCAATTTCTAGTGGA 58.314 45.455 0.00 0.00 42.09 4.02
4554 4935 2.420022 CGCACTTCCCAATTTCTAGTGG 59.580 50.000 0.00 0.00 39.23 4.00
4555 4936 3.074412 ACGCACTTCCCAATTTCTAGTG 58.926 45.455 0.00 0.00 39.29 2.74
4556 4937 3.418684 ACGCACTTCCCAATTTCTAGT 57.581 42.857 0.00 0.00 0.00 2.57
4557 4938 4.330074 CAGTACGCACTTCCCAATTTCTAG 59.670 45.833 0.00 0.00 30.46 2.43
4558 4939 4.020928 TCAGTACGCACTTCCCAATTTCTA 60.021 41.667 0.00 0.00 30.46 2.10
4559 4940 3.074412 CAGTACGCACTTCCCAATTTCT 58.926 45.455 0.00 0.00 30.46 2.52
4560 4941 3.071479 TCAGTACGCACTTCCCAATTTC 58.929 45.455 0.00 0.00 30.46 2.17
4561 4942 3.134574 TCAGTACGCACTTCCCAATTT 57.865 42.857 0.00 0.00 30.46 1.82
4562 4943 2.851263 TCAGTACGCACTTCCCAATT 57.149 45.000 0.00 0.00 30.46 2.32
4563 4944 2.301870 TCTTCAGTACGCACTTCCCAAT 59.698 45.455 0.00 0.00 30.46 3.16
4564 4945 1.689813 TCTTCAGTACGCACTTCCCAA 59.310 47.619 0.00 0.00 30.46 4.12
4565 4946 1.000506 GTCTTCAGTACGCACTTCCCA 59.999 52.381 0.00 0.00 30.46 4.37
4566 4947 1.000506 TGTCTTCAGTACGCACTTCCC 59.999 52.381 0.00 0.00 30.46 3.97
4567 4948 2.433868 TGTCTTCAGTACGCACTTCC 57.566 50.000 0.00 0.00 30.46 3.46
4568 4949 3.639538 TCTTGTCTTCAGTACGCACTTC 58.360 45.455 0.00 0.00 30.46 3.01
4569 4950 3.553096 CCTCTTGTCTTCAGTACGCACTT 60.553 47.826 0.00 0.00 30.46 3.16
4570 4951 2.029828 CCTCTTGTCTTCAGTACGCACT 60.030 50.000 0.00 0.00 34.42 4.40
4571 4952 2.288273 ACCTCTTGTCTTCAGTACGCAC 60.288 50.000 0.00 0.00 0.00 5.34
4572 4953 1.961394 ACCTCTTGTCTTCAGTACGCA 59.039 47.619 0.00 0.00 0.00 5.24
4573 4954 2.329379 CACCTCTTGTCTTCAGTACGC 58.671 52.381 0.00 0.00 0.00 4.42
4574 4955 2.352814 CCCACCTCTTGTCTTCAGTACG 60.353 54.545 0.00 0.00 0.00 3.67
4575 4956 2.613223 GCCCACCTCTTGTCTTCAGTAC 60.613 54.545 0.00 0.00 0.00 2.73
4576 4957 1.623811 GCCCACCTCTTGTCTTCAGTA 59.376 52.381 0.00 0.00 0.00 2.74
4577 4958 0.398318 GCCCACCTCTTGTCTTCAGT 59.602 55.000 0.00 0.00 0.00 3.41
4578 4959 0.671781 CGCCCACCTCTTGTCTTCAG 60.672 60.000 0.00 0.00 0.00 3.02
4579 4960 1.371183 CGCCCACCTCTTGTCTTCA 59.629 57.895 0.00 0.00 0.00 3.02
4580 4961 1.376037 CCGCCCACCTCTTGTCTTC 60.376 63.158 0.00 0.00 0.00 2.87
4581 4962 2.750350 CCGCCCACCTCTTGTCTT 59.250 61.111 0.00 0.00 0.00 3.01
4582 4963 4.021925 GCCGCCCACCTCTTGTCT 62.022 66.667 0.00 0.00 0.00 3.41
4583 4964 4.021925 AGCCGCCCACCTCTTGTC 62.022 66.667 0.00 0.00 0.00 3.18
4584 4965 4.335647 CAGCCGCCCACCTCTTGT 62.336 66.667 0.00 0.00 0.00 3.16
4590 4971 4.506255 ATAAGCCAGCCGCCCACC 62.506 66.667 0.00 0.00 38.78 4.61
4591 4972 3.211963 CATAAGCCAGCCGCCCAC 61.212 66.667 0.00 0.00 38.78 4.61
4594 4975 3.589881 CTGCATAAGCCAGCCGCC 61.590 66.667 0.00 0.00 41.13 6.13
4595 4976 3.589881 CCTGCATAAGCCAGCCGC 61.590 66.667 0.00 0.00 41.13 6.53
4596 4977 2.124570 ACCTGCATAAGCCAGCCG 60.125 61.111 0.00 0.00 41.13 5.52
4597 4978 0.817229 GAGACCTGCATAAGCCAGCC 60.817 60.000 0.00 0.00 41.13 4.85
4598 4979 0.817229 GGAGACCTGCATAAGCCAGC 60.817 60.000 0.00 0.00 41.13 4.85
4599 4980 0.543277 TGGAGACCTGCATAAGCCAG 59.457 55.000 0.00 0.00 41.13 4.85
4600 4981 0.253044 GTGGAGACCTGCATAAGCCA 59.747 55.000 0.00 0.00 41.13 4.75
4601 4982 0.253044 TGTGGAGACCTGCATAAGCC 59.747 55.000 0.00 0.00 41.13 4.35
4602 4983 1.065854 AGTGTGGAGACCTGCATAAGC 60.066 52.381 0.00 0.00 42.57 3.09
4603 4984 2.027745 ACAGTGTGGAGACCTGCATAAG 60.028 50.000 0.00 0.00 32.40 1.73
4604 4985 1.977854 ACAGTGTGGAGACCTGCATAA 59.022 47.619 0.00 0.00 32.40 1.90
4605 4986 1.550524 GACAGTGTGGAGACCTGCATA 59.449 52.381 0.00 0.00 32.40 3.14
4606 4987 0.322975 GACAGTGTGGAGACCTGCAT 59.677 55.000 0.00 0.00 32.40 3.96
4607 4988 1.748403 GACAGTGTGGAGACCTGCA 59.252 57.895 0.00 0.00 0.00 4.41
4608 4989 1.373497 CGACAGTGTGGAGACCTGC 60.373 63.158 0.00 0.00 0.00 4.85
4609 4990 0.039074 GACGACAGTGTGGAGACCTG 60.039 60.000 12.67 0.00 0.00 4.00
4610 4991 0.467474 TGACGACAGTGTGGAGACCT 60.467 55.000 12.67 0.00 0.00 3.85
4611 4992 0.039074 CTGACGACAGTGTGGAGACC 60.039 60.000 12.67 0.00 39.11 3.85
4612 4993 0.664767 GCTGACGACAGTGTGGAGAC 60.665 60.000 16.02 4.02 45.04 3.36
4613 4994 0.823769 AGCTGACGACAGTGTGGAGA 60.824 55.000 16.02 0.00 45.04 3.71
4614 4995 0.665670 CAGCTGACGACAGTGTGGAG 60.666 60.000 8.42 1.02 45.04 3.86
4615 4996 1.363807 CAGCTGACGACAGTGTGGA 59.636 57.895 8.42 0.00 45.04 4.02
4616 4997 2.313172 GCAGCTGACGACAGTGTGG 61.313 63.158 20.43 0.79 45.04 4.17
4617 4998 1.300465 AGCAGCTGACGACAGTGTG 60.300 57.895 20.43 14.04 45.04 3.82
4618 4999 1.300465 CAGCAGCTGACGACAGTGT 60.300 57.895 20.43 0.00 45.04 3.55
4619 5000 2.025969 CCAGCAGCTGACGACAGTG 61.026 63.158 24.90 13.14 45.04 3.66
4620 5001 1.539560 ATCCAGCAGCTGACGACAGT 61.540 55.000 24.90 0.00 45.04 3.55
4621 5002 0.457443 TATCCAGCAGCTGACGACAG 59.543 55.000 24.90 10.66 45.91 3.51
4622 5003 0.457443 CTATCCAGCAGCTGACGACA 59.543 55.000 24.90 1.48 32.44 4.35
4623 5004 0.249238 CCTATCCAGCAGCTGACGAC 60.249 60.000 24.90 0.00 32.44 4.34
4624 5005 0.395724 TCCTATCCAGCAGCTGACGA 60.396 55.000 24.90 13.75 32.44 4.20
4625 5006 0.249238 GTCCTATCCAGCAGCTGACG 60.249 60.000 24.90 8.20 32.44 4.35
4626 5007 0.826715 TGTCCTATCCAGCAGCTGAC 59.173 55.000 24.90 12.98 32.44 3.51
4627 5008 1.117994 CTGTCCTATCCAGCAGCTGA 58.882 55.000 24.90 10.37 32.44 4.26
4628 5009 3.682766 CTGTCCTATCCAGCAGCTG 57.317 57.895 16.23 16.23 0.00 4.24
4634 5015 1.000731 GCAGCTAGCTGTCCTATCCAG 59.999 57.143 37.91 15.43 45.24 3.86
4635 5016 1.043816 GCAGCTAGCTGTCCTATCCA 58.956 55.000 37.91 0.00 45.24 3.41
4636 5017 3.904586 GCAGCTAGCTGTCCTATCC 57.095 57.895 37.91 20.54 45.24 2.59
4659 5040 3.624831 GACGCAAAGTACGCACCGC 62.625 63.158 0.00 0.00 0.00 5.68
4660 5041 2.019951 AGACGCAAAGTACGCACCG 61.020 57.895 0.00 0.00 0.00 4.94
4661 5042 1.491563 CAGACGCAAAGTACGCACC 59.508 57.895 0.00 0.00 0.00 5.01
4662 5043 1.491563 CCAGACGCAAAGTACGCAC 59.508 57.895 0.00 0.00 0.00 5.34
4663 5044 1.666553 CCCAGACGCAAAGTACGCA 60.667 57.895 0.00 0.00 0.00 5.24
4664 5045 3.023591 GCCCAGACGCAAAGTACGC 62.024 63.158 0.00 0.00 0.00 4.42
4665 5046 1.352156 GAGCCCAGACGCAAAGTACG 61.352 60.000 0.00 0.00 0.00 3.67
4666 5047 1.352156 CGAGCCCAGACGCAAAGTAC 61.352 60.000 0.00 0.00 0.00 2.73
4667 5048 1.080093 CGAGCCCAGACGCAAAGTA 60.080 57.895 0.00 0.00 0.00 2.24
4668 5049 2.357517 CGAGCCCAGACGCAAAGT 60.358 61.111 0.00 0.00 0.00 2.66
4669 5050 3.121030 CCGAGCCCAGACGCAAAG 61.121 66.667 0.00 0.00 0.00 2.77
4698 5079 1.676967 GAACAGGGGCAGAAGGCTG 60.677 63.158 0.00 0.00 45.13 4.85
4699 5080 2.759795 GAACAGGGGCAGAAGGCT 59.240 61.111 0.00 0.00 44.01 4.58
4700 5081 2.747855 CGAACAGGGGCAGAAGGC 60.748 66.667 0.00 0.00 43.74 4.35
4701 5082 2.747855 GCGAACAGGGGCAGAAGG 60.748 66.667 0.00 0.00 0.00 3.46
4702 5083 2.032528 TGCGAACAGGGGCAGAAG 59.967 61.111 0.00 0.00 33.52 2.85
4703 5084 2.281484 GTGCGAACAGGGGCAGAA 60.281 61.111 0.00 0.00 40.32 3.02
4704 5085 2.818169 AAGTGCGAACAGGGGCAGA 61.818 57.895 0.00 0.00 40.32 4.26
4705 5086 2.281761 AAGTGCGAACAGGGGCAG 60.282 61.111 0.00 0.00 40.32 4.85
4706 5087 2.594303 CAAGTGCGAACAGGGGCA 60.594 61.111 0.00 0.00 36.70 5.36
4707 5088 4.043200 GCAAGTGCGAACAGGGGC 62.043 66.667 0.00 0.00 0.00 5.80
4708 5089 3.365265 GGCAAGTGCGAACAGGGG 61.365 66.667 0.00 0.00 43.26 4.79
4709 5090 3.365265 GGGCAAGTGCGAACAGGG 61.365 66.667 0.00 0.00 43.26 4.45
4710 5091 3.726517 CGGGCAAGTGCGAACAGG 61.727 66.667 0.00 0.00 43.26 4.00
4711 5092 3.726517 CCGGGCAAGTGCGAACAG 61.727 66.667 0.00 0.00 43.26 3.16
4734 5115 0.463620 CTCCTAGAAGGCCAGTCTGC 59.536 60.000 17.07 0.00 34.61 4.26
4735 5116 1.754226 GACTCCTAGAAGGCCAGTCTG 59.246 57.143 17.07 8.45 36.70 3.51
4736 5117 1.342574 GGACTCCTAGAAGGCCAGTCT 60.343 57.143 5.01 10.11 44.67 3.24
4737 5118 1.116308 GGACTCCTAGAAGGCCAGTC 58.884 60.000 5.01 7.09 44.67 3.51
4738 5119 0.684805 CGGACTCCTAGAAGGCCAGT 60.685 60.000 0.06 0.00 45.71 4.00
4739 5120 0.395862 TCGGACTCCTAGAAGGCCAG 60.396 60.000 0.06 0.00 45.71 4.85
4740 5121 0.683504 GTCGGACTCCTAGAAGGCCA 60.684 60.000 0.06 0.00 45.71 5.36
4741 5122 0.683504 TGTCGGACTCCTAGAAGGCC 60.684 60.000 9.88 0.00 41.52 5.19
4742 5123 1.135053 GTTGTCGGACTCCTAGAAGGC 60.135 57.143 9.88 0.00 34.61 4.35
4743 5124 1.132643 CGTTGTCGGACTCCTAGAAGG 59.867 57.143 9.88 0.00 36.46 3.46
4744 5125 2.082231 TCGTTGTCGGACTCCTAGAAG 58.918 52.381 9.88 0.00 37.69 2.85
4745 5126 1.808945 GTCGTTGTCGGACTCCTAGAA 59.191 52.381 9.88 0.00 37.69 2.10
4746 5127 1.446907 GTCGTTGTCGGACTCCTAGA 58.553 55.000 9.88 0.00 37.69 2.43
4747 5128 0.096628 CGTCGTTGTCGGACTCCTAG 59.903 60.000 9.88 0.00 37.69 3.02
4748 5129 2.165380 CGTCGTTGTCGGACTCCTA 58.835 57.895 9.88 0.00 37.69 2.94
4749 5130 2.952245 CGTCGTTGTCGGACTCCT 59.048 61.111 9.88 0.00 37.69 3.69
4755 5136 4.289245 ACCACCCGTCGTTGTCGG 62.289 66.667 0.00 0.00 46.49 4.79
4756 5137 2.732094 GACCACCCGTCGTTGTCG 60.732 66.667 0.00 0.00 38.55 4.35
4763 5144 4.065281 CCTCACCGACCACCCGTC 62.065 72.222 0.00 0.00 38.21 4.79
4766 5147 4.394712 CTGCCTCACCGACCACCC 62.395 72.222 0.00 0.00 0.00 4.61
4767 5148 4.394712 CCTGCCTCACCGACCACC 62.395 72.222 0.00 0.00 0.00 4.61
4768 5149 3.591254 GACCTGCCTCACCGACCAC 62.591 68.421 0.00 0.00 0.00 4.16
4769 5150 3.311110 GACCTGCCTCACCGACCA 61.311 66.667 0.00 0.00 0.00 4.02
4770 5151 4.083862 GGACCTGCCTCACCGACC 62.084 72.222 0.00 0.00 0.00 4.79
4771 5152 4.436998 CGGACCTGCCTCACCGAC 62.437 72.222 0.00 0.00 46.94 4.79
4774 5155 3.075005 TAGCGGACCTGCCTCACC 61.075 66.667 4.93 0.00 34.65 4.02
4775 5156 2.496817 CTAGCGGACCTGCCTCAC 59.503 66.667 4.93 0.00 34.65 3.51
4776 5157 3.461773 GCTAGCGGACCTGCCTCA 61.462 66.667 0.00 0.00 34.65 3.86
4777 5158 3.438017 CTGCTAGCGGACCTGCCTC 62.438 68.421 19.34 0.00 34.65 4.70
4778 5159 3.465403 CTGCTAGCGGACCTGCCT 61.465 66.667 19.34 0.00 34.65 4.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.