Multiple sequence alignment - TraesCS2B01G506300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G506300 chr2B 100.000 7497 0 0 1 7497 701757399 701764895 0.000000e+00 13845.0
1 TraesCS2B01G506300 chr2B 77.047 1429 209 70 4180 5547 701097844 701096474 0.000000e+00 712.0
2 TraesCS2B01G506300 chr2B 75.115 1085 203 49 5696 6752 701096349 701095304 5.340000e-121 446.0
3 TraesCS2B01G506300 chr2B 82.383 193 27 6 257 443 701100574 701100383 2.160000e-35 161.0
4 TraesCS2B01G506300 chr2D 96.667 4951 131 12 2561 7497 582705446 582710376 0.000000e+00 8198.0
5 TraesCS2B01G506300 chr2D 93.714 2450 79 34 1 2400 582703024 582705448 0.000000e+00 3602.0
6 TraesCS2B01G506300 chr2D 76.108 1444 222 77 4180 5547 582027137 582025741 6.340000e-180 641.0
7 TraesCS2B01G506300 chr2D 75.133 1126 216 47 5696 6795 582025616 582024529 3.170000e-128 470.0
8 TraesCS2B01G506300 chr2D 89.640 222 19 4 2 221 372801675 372801456 5.730000e-71 279.0
9 TraesCS2B01G506300 chr2D 83.511 188 26 4 257 439 582029868 582029681 3.600000e-38 171.0
10 TraesCS2B01G506300 chr3D 88.835 2669 226 28 4069 6723 577912271 577909661 0.000000e+00 3212.0
11 TraesCS2B01G506300 chr3D 88.111 1085 94 19 5606 6676 577908544 577909607 0.000000e+00 1256.0
12 TraesCS2B01G506300 chr3D 87.394 1063 94 7 4489 5550 577907527 577908550 0.000000e+00 1184.0
13 TraesCS2B01G506300 chr3D 88.889 549 45 10 774 1311 577905291 577905834 0.000000e+00 662.0
14 TraesCS2B01G506300 chr3D 85.938 576 44 18 767 1311 577913860 577913291 1.400000e-161 580.0
15 TraesCS2B01G506300 chr3D 92.553 376 23 4 4069 4441 577907161 577907534 1.110000e-147 534.0
16 TraesCS2B01G506300 chr3D 89.286 224 21 3 2 223 580213941 580213719 2.060000e-70 278.0
17 TraesCS2B01G506300 chr3D 97.500 40 1 0 723 762 577914002 577913963 1.350000e-07 69.4
18 TraesCS2B01G506300 chr3B 88.147 2666 242 35 4069 6715 771000012 771002622 0.000000e+00 3105.0
19 TraesCS2B01G506300 chr3B 87.205 2626 258 38 4072 6676 771005238 771002670 0.000000e+00 2916.0
20 TraesCS2B01G506300 chr3B 86.275 2164 208 43 4560 6709 770980833 770982921 0.000000e+00 2268.0
21 TraesCS2B01G506300 chr3B 87.716 1734 158 28 4069 5796 770985848 770984164 0.000000e+00 1971.0
22 TraesCS2B01G506300 chr3B 85.915 781 81 15 5908 6676 770984162 770983399 0.000000e+00 806.0
23 TraesCS2B01G506300 chr3B 93.379 438 27 2 4069 4506 770980396 770980831 0.000000e+00 647.0
24 TraesCS2B01G506300 chr3B 85.219 548 47 16 767 1311 771007087 771006571 3.980000e-147 532.0
25 TraesCS2B01G506300 chr3B 85.519 511 41 16 767 1275 770998239 770998718 3.120000e-138 503.0
26 TraesCS2B01G506300 chr3B 85.323 511 43 15 767 1275 770978546 770979026 4.040000e-137 499.0
27 TraesCS2B01G506300 chr3B 86.649 382 23 15 768 1146 770987561 770987205 1.520000e-106 398.0
28 TraesCS2B01G506300 chr3B 92.265 181 12 2 2384 2564 4226306 4226128 9.650000e-64 255.0
29 TraesCS2B01G506300 chr3B 91.713 181 13 2 2384 2564 5081699 5081521 4.490000e-62 250.0
30 TraesCS2B01G506300 chr3B 92.135 178 13 1 2387 2564 775481743 775481567 4.490000e-62 250.0
31 TraesCS2B01G506300 chr4D 94.333 1094 45 8 1311 2399 359292691 359293772 0.000000e+00 1661.0
32 TraesCS2B01G506300 chr4D 94.864 662 23 5 2561 3218 359293771 359294425 0.000000e+00 1024.0
33 TraesCS2B01G506300 chr2A 77.579 2404 364 88 4460 6799 690317374 690315082 0.000000e+00 1291.0
34 TraesCS2B01G506300 chr2A 80.328 488 75 16 767 1244 690319580 690319104 4.300000e-92 350.0
35 TraesCS2B01G506300 chr2A 86.192 239 24 6 4123 4356 690317643 690317409 4.490000e-62 250.0
36 TraesCS2B01G506300 chr2A 87.097 217 21 7 2399 2611 733925718 733925505 9.720000e-59 239.0
37 TraesCS2B01G506300 chrUn 90.498 221 19 2 2 221 92752141 92751922 2.650000e-74 291.0
38 TraesCS2B01G506300 chrUn 89.189 222 22 2 1 221 342589988 342589768 7.410000e-70 276.0
39 TraesCS2B01G506300 chrUn 89.189 222 22 2 1 221 342656858 342656638 7.410000e-70 276.0
40 TraesCS2B01G506300 chr7D 91.787 207 17 0 2 208 530944440 530944646 9.520000e-74 289.0
41 TraesCS2B01G506300 chr1D 91.304 207 18 0 2 208 30590572 30590366 4.430000e-72 283.0
42 TraesCS2B01G506300 chr6D 89.593 221 20 3 2 221 358091736 358091518 2.060000e-70 278.0
43 TraesCS2B01G506300 chr6D 93.103 174 12 0 2398 2571 260024675 260024502 9.650000e-64 255.0
44 TraesCS2B01G506300 chr6A 93.103 174 12 0 2398 2571 370675439 370675612 9.650000e-64 255.0
45 TraesCS2B01G506300 chr7B 93.064 173 12 0 2396 2568 185623063 185622891 3.470000e-63 254.0
46 TraesCS2B01G506300 chr5D 89.231 195 17 4 2372 2564 368995332 368995524 2.700000e-59 241.0
47 TraesCS2B01G506300 chr6B 88.718 195 20 2 2387 2581 716638183 716638375 3.500000e-58 237.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G506300 chr2B 701757399 701764895 7496 False 13845.000000 13845 100.000000 1 7497 1 chr2B.!!$F1 7496
1 TraesCS2B01G506300 chr2B 701095304 701100574 5270 True 439.666667 712 78.181667 257 6752 3 chr2B.!!$R1 6495
2 TraesCS2B01G506300 chr2D 582703024 582710376 7352 False 5900.000000 8198 95.190500 1 7497 2 chr2D.!!$F1 7496
3 TraesCS2B01G506300 chr2D 582024529 582029868 5339 True 427.333333 641 78.250667 257 6795 3 chr2D.!!$R2 6538
4 TraesCS2B01G506300 chr3D 577909661 577914002 4341 True 1287.133333 3212 90.757667 723 6723 3 chr3D.!!$R2 6000
5 TraesCS2B01G506300 chr3D 577905291 577909607 4316 False 909.000000 1256 89.236750 774 6676 4 chr3D.!!$F1 5902
6 TraesCS2B01G506300 chr3B 770998239 771002622 4383 False 1804.000000 3105 86.833000 767 6715 2 chr3B.!!$F2 5948
7 TraesCS2B01G506300 chr3B 771002670 771007087 4417 True 1724.000000 2916 86.212000 767 6676 2 chr3B.!!$R5 5909
8 TraesCS2B01G506300 chr3B 770978546 770982921 4375 False 1138.000000 2268 88.325667 767 6709 3 chr3B.!!$F1 5942
9 TraesCS2B01G506300 chr3B 770983399 770987561 4162 True 1058.333333 1971 86.760000 768 6676 3 chr3B.!!$R4 5908
10 TraesCS2B01G506300 chr4D 359292691 359294425 1734 False 1342.500000 1661 94.598500 1311 3218 2 chr4D.!!$F1 1907
11 TraesCS2B01G506300 chr2A 690315082 690319580 4498 True 630.333333 1291 81.366333 767 6799 3 chr2A.!!$R2 6032

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
394 400 0.249120 TCCCTCCACGCTACAATGTG 59.751 55.000 0.00 0.00 35.87 3.21 F
685 750 0.320374 TTAGCCTCCCAAGTGTGTCG 59.680 55.000 0.00 0.00 0.00 4.35 F
690 755 0.393077 CTCCCAAGTGTGTCGAGGTT 59.607 55.000 0.00 0.00 0.00 3.50 F
1028 1751 0.517316 CGGAAGAAAGCCTGGTTTCG 59.483 55.000 14.13 2.19 40.72 3.46 F
1324 2214 0.586319 CTGCTTTCTTTGTTCGCCGA 59.414 50.000 0.00 0.00 0.00 5.54 F
2408 4580 1.135083 ACTTCCAATGTACTCGCTCCG 60.135 52.381 0.00 0.00 0.00 4.63 F
3240 5536 1.071542 TGATTGAGTTCTTCACGGGCA 59.928 47.619 0.00 0.00 34.94 5.36 F
5011 7653 0.036448 TTGGGAAATACGCAACCCGA 59.964 50.000 0.00 0.00 44.40 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2043 4214 3.617263 CGAGGATAAAGTTTCCCGTCAAG 59.383 47.826 0.00 0.00 33.45 3.02 R
2547 4720 1.001282 AGACTACTCCCTCGGTTCCT 58.999 55.000 0.00 0.00 0.00 3.36 R
2552 4725 4.653868 ACACATATAGACTACTCCCTCGG 58.346 47.826 0.00 0.00 0.00 4.63 R
2600 4773 7.094848 GCATAAAGGAAGCAAAAATAGGCAAAA 60.095 33.333 0.00 0.00 0.00 2.44 R
3080 5373 0.037046 GCATGCAACTTTTGAGGGGG 60.037 55.000 14.21 0.00 0.00 5.40 R
3398 5694 1.013596 CACGTGCCAAGACACAAGAA 58.986 50.000 0.82 0.00 40.73 2.52 R
5212 7887 1.484240 GGCTCAAGAGACTACCATGCT 59.516 52.381 0.32 0.00 32.39 3.79 R
6968 9728 0.179936 TATCATGGCCATGCACGACA 59.820 50.000 36.47 21.26 38.65 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.930908 GACTCGTTCATCCCGACGGT 61.931 60.000 13.94 0.00 39.59 4.83
60 61 1.078143 GCCGTTCTCCTCCTTGCAT 60.078 57.895 0.00 0.00 0.00 3.96
80 81 4.554036 GCCATCGAGGTCCCTGCC 62.554 72.222 0.00 0.00 40.61 4.85
127 128 6.424032 GGTGAAAACCCAATATCTCCTTAGT 58.576 40.000 0.00 0.00 0.00 2.24
133 134 5.388599 CCCAATATCTCCTTAGTTTGGGT 57.611 43.478 9.82 0.00 45.34 4.51
163 164 1.337823 ACTGCATGTGTCGTACCCTTC 60.338 52.381 0.00 0.00 0.00 3.46
167 168 2.611971 GCATGTGTCGTACCCTTCTTGA 60.612 50.000 0.00 0.00 0.00 3.02
172 173 1.001633 GTCGTACCCTTCTTGAAGGCA 59.998 52.381 20.71 9.98 38.63 4.75
195 196 1.903404 CTGGGGTGTTTGGGTGCTC 60.903 63.158 0.00 0.00 0.00 4.26
214 215 1.066430 TCGGTTAGAGGAACATGTGGC 60.066 52.381 0.00 0.00 40.09 5.01
371 377 2.158842 AGCACTGTCCCAGCTCATATTC 60.159 50.000 0.00 0.00 34.37 1.75
391 397 2.238646 TCATTTCCCTCCACGCTACAAT 59.761 45.455 0.00 0.00 0.00 2.71
394 400 0.249120 TCCCTCCACGCTACAATGTG 59.751 55.000 0.00 0.00 35.87 3.21
395 401 1.369091 CCCTCCACGCTACAATGTGC 61.369 60.000 0.00 0.00 34.77 4.57
438 452 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
440 454 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
441 455 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
442 456 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
443 457 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
444 458 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
445 459 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
448 462 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
450 464 4.871822 TCTCTCTCTCTCTCTCTCTCTGA 58.128 47.826 0.00 0.00 0.00 3.27
457 471 6.014242 TCTCTCTCTCTCTCTCTGATATGACC 60.014 46.154 0.00 0.00 0.00 4.02
540 590 3.215568 CCCCGCACACAGCAACAA 61.216 61.111 0.00 0.00 46.13 2.83
626 691 0.856982 TCATCCTCTCTCTCCCCTCC 59.143 60.000 0.00 0.00 0.00 4.30
627 692 0.859760 CATCCTCTCTCTCCCCTCCT 59.140 60.000 0.00 0.00 0.00 3.69
628 693 1.220236 CATCCTCTCTCTCCCCTCCTT 59.780 57.143 0.00 0.00 0.00 3.36
629 694 0.930726 TCCTCTCTCTCCCCTCCTTC 59.069 60.000 0.00 0.00 0.00 3.46
630 695 0.933700 CCTCTCTCTCCCCTCCTTCT 59.066 60.000 0.00 0.00 0.00 2.85
631 696 1.133482 CCTCTCTCTCCCCTCCTTCTC 60.133 61.905 0.00 0.00 0.00 2.87
632 697 1.852965 CTCTCTCTCCCCTCCTTCTCT 59.147 57.143 0.00 0.00 0.00 3.10
633 698 1.850345 TCTCTCTCCCCTCCTTCTCTC 59.150 57.143 0.00 0.00 0.00 3.20
634 699 1.852965 CTCTCTCCCCTCCTTCTCTCT 59.147 57.143 0.00 0.00 0.00 3.10
635 700 2.244769 CTCTCTCCCCTCCTTCTCTCTT 59.755 54.545 0.00 0.00 0.00 2.85
636 701 2.243736 TCTCTCCCCTCCTTCTCTCTTC 59.756 54.545 0.00 0.00 0.00 2.87
637 702 1.289530 TCTCCCCTCCTTCTCTCTTCC 59.710 57.143 0.00 0.00 0.00 3.46
638 703 1.290732 CTCCCCTCCTTCTCTCTTCCT 59.709 57.143 0.00 0.00 0.00 3.36
639 704 1.725182 TCCCCTCCTTCTCTCTTCCTT 59.275 52.381 0.00 0.00 0.00 3.36
640 705 2.114506 TCCCCTCCTTCTCTCTTCCTTT 59.885 50.000 0.00 0.00 0.00 3.11
641 706 2.916269 CCCCTCCTTCTCTCTTCCTTTT 59.084 50.000 0.00 0.00 0.00 2.27
642 707 3.054728 CCCCTCCTTCTCTCTTCCTTTTC 60.055 52.174 0.00 0.00 0.00 2.29
643 708 3.843619 CCCTCCTTCTCTCTTCCTTTTCT 59.156 47.826 0.00 0.00 0.00 2.52
644 709 4.288366 CCCTCCTTCTCTCTTCCTTTTCTT 59.712 45.833 0.00 0.00 0.00 2.52
645 710 5.244755 CCTCCTTCTCTCTTCCTTTTCTTG 58.755 45.833 0.00 0.00 0.00 3.02
646 711 5.221823 CCTCCTTCTCTCTTCCTTTTCTTGT 60.222 44.000 0.00 0.00 0.00 3.16
647 712 6.253946 TCCTTCTCTCTTCCTTTTCTTGTT 57.746 37.500 0.00 0.00 0.00 2.83
648 713 6.292150 TCCTTCTCTCTTCCTTTTCTTGTTC 58.708 40.000 0.00 0.00 0.00 3.18
649 714 6.100424 TCCTTCTCTCTTCCTTTTCTTGTTCT 59.900 38.462 0.00 0.00 0.00 3.01
650 715 6.770303 CCTTCTCTCTTCCTTTTCTTGTTCTT 59.230 38.462 0.00 0.00 0.00 2.52
651 716 7.255070 CCTTCTCTCTTCCTTTTCTTGTTCTTG 60.255 40.741 0.00 0.00 0.00 3.02
652 717 6.058183 TCTCTCTTCCTTTTCTTGTTCTTGG 58.942 40.000 0.00 0.00 0.00 3.61
653 718 6.001449 TCTCTTCCTTTTCTTGTTCTTGGA 57.999 37.500 0.00 0.00 0.00 3.53
654 719 6.605119 TCTCTTCCTTTTCTTGTTCTTGGAT 58.395 36.000 0.00 0.00 0.00 3.41
655 720 7.062957 TCTCTTCCTTTTCTTGTTCTTGGATT 58.937 34.615 0.00 0.00 0.00 3.01
656 721 8.217799 TCTCTTCCTTTTCTTGTTCTTGGATTA 58.782 33.333 0.00 0.00 0.00 1.75
657 722 8.940397 TCTTCCTTTTCTTGTTCTTGGATTAT 57.060 30.769 0.00 0.00 0.00 1.28
658 723 8.796475 TCTTCCTTTTCTTGTTCTTGGATTATG 58.204 33.333 0.00 0.00 0.00 1.90
659 724 7.466746 TCCTTTTCTTGTTCTTGGATTATGG 57.533 36.000 0.00 0.00 0.00 2.74
660 725 7.010160 TCCTTTTCTTGTTCTTGGATTATGGT 58.990 34.615 0.00 0.00 0.00 3.55
661 726 7.508977 TCCTTTTCTTGTTCTTGGATTATGGTT 59.491 33.333 0.00 0.00 0.00 3.67
662 727 8.150296 CCTTTTCTTGTTCTTGGATTATGGTTT 58.850 33.333 0.00 0.00 0.00 3.27
665 730 7.938140 TCTTGTTCTTGGATTATGGTTTAGG 57.062 36.000 0.00 0.00 0.00 2.69
666 731 7.466804 TCTTGTTCTTGGATTATGGTTTAGGT 58.533 34.615 0.00 0.00 0.00 3.08
667 732 7.947890 TCTTGTTCTTGGATTATGGTTTAGGTT 59.052 33.333 0.00 0.00 0.00 3.50
668 733 9.238368 CTTGTTCTTGGATTATGGTTTAGGTTA 57.762 33.333 0.00 0.00 0.00 2.85
669 734 8.801882 TGTTCTTGGATTATGGTTTAGGTTAG 57.198 34.615 0.00 0.00 0.00 2.34
670 735 7.338449 TGTTCTTGGATTATGGTTTAGGTTAGC 59.662 37.037 0.00 0.00 0.00 3.09
671 736 6.362248 TCTTGGATTATGGTTTAGGTTAGCC 58.638 40.000 0.00 0.00 0.00 3.93
673 738 5.937111 TGGATTATGGTTTAGGTTAGCCTC 58.063 41.667 0.00 0.00 45.64 4.70
674 739 5.163131 TGGATTATGGTTTAGGTTAGCCTCC 60.163 44.000 0.00 0.00 45.64 4.30
675 740 4.783560 TTATGGTTTAGGTTAGCCTCCC 57.216 45.455 0.00 1.62 45.64 4.30
676 741 2.047769 TGGTTTAGGTTAGCCTCCCA 57.952 50.000 0.00 4.45 45.64 4.37
677 742 2.350419 TGGTTTAGGTTAGCCTCCCAA 58.650 47.619 0.00 0.00 45.64 4.12
678 743 2.307686 TGGTTTAGGTTAGCCTCCCAAG 59.692 50.000 0.00 0.00 45.64 3.61
679 744 2.307980 GGTTTAGGTTAGCCTCCCAAGT 59.692 50.000 0.00 0.00 45.64 3.16
680 745 3.344515 GTTTAGGTTAGCCTCCCAAGTG 58.655 50.000 0.00 0.00 45.64 3.16
681 746 2.337359 TAGGTTAGCCTCCCAAGTGT 57.663 50.000 0.00 0.00 45.64 3.55
682 747 0.693049 AGGTTAGCCTCCCAAGTGTG 59.307 55.000 0.00 0.00 42.67 3.82
683 748 0.400594 GGTTAGCCTCCCAAGTGTGT 59.599 55.000 0.00 0.00 0.00 3.72
684 749 1.610886 GGTTAGCCTCCCAAGTGTGTC 60.611 57.143 0.00 0.00 0.00 3.67
685 750 0.320374 TTAGCCTCCCAAGTGTGTCG 59.680 55.000 0.00 0.00 0.00 4.35
686 751 0.541063 TAGCCTCCCAAGTGTGTCGA 60.541 55.000 0.00 0.00 0.00 4.20
687 752 1.374758 GCCTCCCAAGTGTGTCGAG 60.375 63.158 0.00 0.00 0.00 4.04
688 753 1.293498 CCTCCCAAGTGTGTCGAGG 59.707 63.158 0.00 0.00 34.67 4.63
689 754 1.472662 CCTCCCAAGTGTGTCGAGGT 61.473 60.000 0.00 0.00 35.82 3.85
690 755 0.393077 CTCCCAAGTGTGTCGAGGTT 59.607 55.000 0.00 0.00 0.00 3.50
691 756 0.834612 TCCCAAGTGTGTCGAGGTTT 59.165 50.000 0.00 0.00 0.00 3.27
692 757 1.210967 TCCCAAGTGTGTCGAGGTTTT 59.789 47.619 0.00 0.00 0.00 2.43
693 758 1.602377 CCCAAGTGTGTCGAGGTTTTC 59.398 52.381 0.00 0.00 0.00 2.29
694 759 2.561569 CCAAGTGTGTCGAGGTTTTCT 58.438 47.619 0.00 0.00 0.00 2.52
695 760 2.943033 CCAAGTGTGTCGAGGTTTTCTT 59.057 45.455 0.00 0.00 0.00 2.52
696 761 3.242739 CCAAGTGTGTCGAGGTTTTCTTG 60.243 47.826 0.00 0.00 0.00 3.02
697 762 3.261981 AGTGTGTCGAGGTTTTCTTGT 57.738 42.857 0.00 0.00 0.00 3.16
698 763 3.606687 AGTGTGTCGAGGTTTTCTTGTT 58.393 40.909 0.00 0.00 0.00 2.83
699 764 3.621715 AGTGTGTCGAGGTTTTCTTGTTC 59.378 43.478 0.00 0.00 0.00 3.18
700 765 3.621715 GTGTGTCGAGGTTTTCTTGTTCT 59.378 43.478 0.00 0.00 0.00 3.01
701 766 4.094442 GTGTGTCGAGGTTTTCTTGTTCTT 59.906 41.667 0.00 0.00 0.00 2.52
702 767 4.094294 TGTGTCGAGGTTTTCTTGTTCTTG 59.906 41.667 0.00 0.00 0.00 3.02
703 768 3.625764 TGTCGAGGTTTTCTTGTTCTTGG 59.374 43.478 0.00 0.00 0.00 3.61
704 769 3.875134 GTCGAGGTTTTCTTGTTCTTGGA 59.125 43.478 0.00 0.00 0.00 3.53
705 770 4.515567 GTCGAGGTTTTCTTGTTCTTGGAT 59.484 41.667 0.00 0.00 0.00 3.41
706 771 5.008712 GTCGAGGTTTTCTTGTTCTTGGATT 59.991 40.000 0.00 0.00 0.00 3.01
707 772 6.204108 GTCGAGGTTTTCTTGTTCTTGGATTA 59.796 38.462 0.00 0.00 0.00 1.75
708 773 6.940298 TCGAGGTTTTCTTGTTCTTGGATTAT 59.060 34.615 0.00 0.00 0.00 1.28
709 774 7.023575 CGAGGTTTTCTTGTTCTTGGATTATG 58.976 38.462 0.00 0.00 0.00 1.90
710 775 7.232118 AGGTTTTCTTGTTCTTGGATTATGG 57.768 36.000 0.00 0.00 0.00 2.74
711 776 6.782494 AGGTTTTCTTGTTCTTGGATTATGGT 59.218 34.615 0.00 0.00 0.00 3.55
712 777 7.290014 AGGTTTTCTTGTTCTTGGATTATGGTT 59.710 33.333 0.00 0.00 0.00 3.67
713 778 7.931407 GGTTTTCTTGTTCTTGGATTATGGTTT 59.069 33.333 0.00 0.00 0.00 3.27
714 779 9.974980 GTTTTCTTGTTCTTGGATTATGGTTTA 57.025 29.630 0.00 0.00 0.00 2.01
715 780 9.974980 TTTTCTTGTTCTTGGATTATGGTTTAC 57.025 29.630 0.00 0.00 0.00 2.01
716 781 8.698973 TTCTTGTTCTTGGATTATGGTTTACA 57.301 30.769 0.00 0.00 0.00 2.41
717 782 8.877864 TCTTGTTCTTGGATTATGGTTTACAT 57.122 30.769 0.00 0.00 43.68 2.29
718 783 9.308000 TCTTGTTCTTGGATTATGGTTTACATT 57.692 29.630 0.00 0.00 41.03 2.71
754 819 3.750639 AGAGATCTCGTTCGTCTTGAC 57.249 47.619 16.97 0.00 34.09 3.18
762 827 5.047847 TCTCGTTCGTCTTGACATTTTTCT 58.952 37.500 1.59 0.00 0.00 2.52
763 828 5.522460 TCTCGTTCGTCTTGACATTTTTCTT 59.478 36.000 1.59 0.00 0.00 2.52
764 829 5.498159 TCGTTCGTCTTGACATTTTTCTTG 58.502 37.500 1.59 0.00 0.00 3.02
765 830 5.064198 TCGTTCGTCTTGACATTTTTCTTGT 59.936 36.000 1.59 0.00 0.00 3.16
766 831 5.737290 CGTTCGTCTTGACATTTTTCTTGTT 59.263 36.000 1.59 0.00 0.00 2.83
767 832 6.076092 CGTTCGTCTTGACATTTTTCTTGTTC 60.076 38.462 1.59 0.00 0.00 3.18
768 833 6.677781 TCGTCTTGACATTTTTCTTGTTCT 57.322 33.333 1.59 0.00 0.00 3.01
769 834 6.715464 TCGTCTTGACATTTTTCTTGTTCTC 58.285 36.000 1.59 0.00 0.00 2.87
771 836 7.709182 TCGTCTTGACATTTTTCTTGTTCTCTA 59.291 33.333 1.59 0.00 0.00 2.43
842 1323 5.680619 TCTCTAACAGTCCATCTCTCTCTC 58.319 45.833 0.00 0.00 0.00 3.20
908 1399 4.017037 TCTCATCCTCTCTAAAGTGTCCCT 60.017 45.833 0.00 0.00 0.00 4.20
922 1611 1.132527 TGTCCCTCCCTCTCTTTTCCA 60.133 52.381 0.00 0.00 0.00 3.53
941 1630 4.826616 TCCATCCTCTCTCTCTCTCTCTA 58.173 47.826 0.00 0.00 0.00 2.43
1010 1727 0.883833 ACCTCAGAAATGCCAAAGCG 59.116 50.000 0.00 0.00 44.31 4.68
1028 1751 0.517316 CGGAAGAAAGCCTGGTTTCG 59.483 55.000 14.13 2.19 40.72 3.46
1053 1776 4.404507 TGCAGATAGTTTTGAAACTCGC 57.595 40.909 12.05 11.20 45.65 5.03
1055 1778 4.455533 TGCAGATAGTTTTGAAACTCGCAT 59.544 37.500 12.05 1.83 45.65 4.73
1256 1989 1.129811 GACGGTAATTTGGTTGAGCCG 59.870 52.381 0.00 0.00 42.86 5.52
1324 2214 0.586319 CTGCTTTCTTTGTTCGCCGA 59.414 50.000 0.00 0.00 0.00 5.54
1332 2222 5.614923 TTCTTTGTTCGCCGAATATTTCA 57.385 34.783 1.55 0.00 0.00 2.69
1654 3821 9.436957 AATACGGGCTATCACTCATTATTTTAG 57.563 33.333 0.00 0.00 0.00 1.85
1887 4058 9.554724 GTGGTCTTGTAACATAACATTTATGTG 57.445 33.333 11.39 1.12 41.61 3.21
2108 4279 5.529581 TGTCGGCTCAACATATAAGATGA 57.470 39.130 0.00 0.00 0.00 2.92
2330 4502 1.549170 ACTCATTCCCAGTGTACGGTC 59.451 52.381 0.00 0.00 0.00 4.79
2397 4569 4.696877 TGACTGTCATGCTTACTTCCAATG 59.303 41.667 6.36 0.00 0.00 2.82
2403 4575 5.005779 GTCATGCTTACTTCCAATGTACTCG 59.994 44.000 0.00 0.00 0.00 4.18
2408 4580 1.135083 ACTTCCAATGTACTCGCTCCG 60.135 52.381 0.00 0.00 0.00 4.63
2412 4584 1.278238 CAATGTACTCGCTCCGTTCC 58.722 55.000 0.00 0.00 0.00 3.62
2413 4585 1.135083 CAATGTACTCGCTCCGTTCCT 60.135 52.381 0.00 0.00 0.00 3.36
2419 4592 4.581824 TGTACTCGCTCCGTTCCTAAATAT 59.418 41.667 0.00 0.00 0.00 1.28
2426 4599 5.293569 CGCTCCGTTCCTAAATATTTGTCTT 59.706 40.000 11.05 0.00 0.00 3.01
2427 4600 6.183360 CGCTCCGTTCCTAAATATTTGTCTTT 60.183 38.462 11.05 0.00 0.00 2.52
2428 4601 7.187480 GCTCCGTTCCTAAATATTTGTCTTTC 58.813 38.462 11.05 0.00 0.00 2.62
2429 4602 7.065923 GCTCCGTTCCTAAATATTTGTCTTTCT 59.934 37.037 11.05 0.00 0.00 2.52
2430 4603 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2431 4604 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2432 4605 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2447 4620 6.936279 TCTTTCTAGACATTTCGAATGGACT 58.064 36.000 0.00 2.87 0.00 3.85
2448 4621 8.063200 TCTTTCTAGACATTTCGAATGGACTA 57.937 34.615 0.00 3.91 0.00 2.59
2449 4622 7.974501 TCTTTCTAGACATTTCGAATGGACTAC 59.025 37.037 0.00 0.00 0.00 2.73
2450 4623 5.817988 TCTAGACATTTCGAATGGACTACG 58.182 41.667 0.00 0.00 0.00 3.51
2451 4624 4.713824 AGACATTTCGAATGGACTACGA 57.286 40.909 0.00 0.00 0.00 3.43
2452 4625 5.068234 AGACATTTCGAATGGACTACGAA 57.932 39.130 0.00 0.00 42.70 3.85
2457 4630 5.937165 TTTCGAATGGACTACGAAATACG 57.063 39.130 0.00 0.00 46.06 3.06
2458 4631 4.799949 TTTCGAATGGACTACGAAATACGG 59.200 41.667 0.00 0.00 46.06 4.02
2459 4632 5.392919 TTTCGAATGGACTACGAAATACGGA 60.393 40.000 0.00 0.00 46.06 4.69
2460 4633 6.681120 TTTCGAATGGACTACGAAATACGGAT 60.681 38.462 0.00 0.00 46.06 4.18
2461 4634 8.623322 TTTCGAATGGACTACGAAATACGGATG 61.623 40.741 0.00 0.00 46.06 3.51
2475 4648 9.569167 CGAAATACGGATGTATGTAGACATATT 57.431 33.333 5.69 0.00 40.42 1.28
2505 4678 8.955061 AGTGTAGATTCATTCATTTTGTTTCG 57.045 30.769 0.00 0.00 0.00 3.46
2506 4679 7.538678 AGTGTAGATTCATTCATTTTGTTTCGC 59.461 33.333 0.00 0.00 0.00 4.70
2507 4680 7.325821 GTGTAGATTCATTCATTTTGTTTCGCA 59.674 33.333 0.00 0.00 0.00 5.10
2508 4681 8.028354 TGTAGATTCATTCATTTTGTTTCGCAT 58.972 29.630 0.00 0.00 0.00 4.73
2509 4682 7.285783 AGATTCATTCATTTTGTTTCGCATG 57.714 32.000 0.00 0.00 0.00 4.06
2510 4683 6.869913 AGATTCATTCATTTTGTTTCGCATGT 59.130 30.769 0.00 0.00 0.00 3.21
2511 4684 8.028354 AGATTCATTCATTTTGTTTCGCATGTA 58.972 29.630 0.00 0.00 0.00 2.29
2512 4685 7.565450 TTCATTCATTTTGTTTCGCATGTAG 57.435 32.000 0.00 0.00 0.00 2.74
2513 4686 6.676950 TCATTCATTTTGTTTCGCATGTAGT 58.323 32.000 0.00 0.00 0.00 2.73
2514 4687 6.801377 TCATTCATTTTGTTTCGCATGTAGTC 59.199 34.615 0.00 0.00 0.00 2.59
2515 4688 5.681337 TCATTTTGTTTCGCATGTAGTCA 57.319 34.783 0.00 0.00 0.00 3.41
2516 4689 5.448438 TCATTTTGTTTCGCATGTAGTCAC 58.552 37.500 0.00 0.00 0.00 3.67
2517 4690 5.238432 TCATTTTGTTTCGCATGTAGTCACT 59.762 36.000 0.00 0.00 0.00 3.41
2518 4691 5.493133 TTTTGTTTCGCATGTAGTCACTT 57.507 34.783 0.00 0.00 0.00 3.16
2519 4692 4.466567 TTGTTTCGCATGTAGTCACTTG 57.533 40.909 0.00 0.00 33.92 3.16
2520 4693 3.462982 TGTTTCGCATGTAGTCACTTGT 58.537 40.909 0.00 0.00 33.46 3.16
2521 4694 3.874543 TGTTTCGCATGTAGTCACTTGTT 59.125 39.130 0.00 0.00 33.46 2.83
2522 4695 4.211389 GTTTCGCATGTAGTCACTTGTTG 58.789 43.478 0.00 0.00 33.46 3.33
2523 4696 3.378911 TCGCATGTAGTCACTTGTTGA 57.621 42.857 0.00 0.00 33.46 3.18
2524 4697 3.723260 TCGCATGTAGTCACTTGTTGAA 58.277 40.909 0.00 0.00 35.39 2.69
2525 4698 4.123506 TCGCATGTAGTCACTTGTTGAAA 58.876 39.130 0.00 0.00 35.39 2.69
2526 4699 4.754618 TCGCATGTAGTCACTTGTTGAAAT 59.245 37.500 0.00 0.00 35.39 2.17
2527 4700 5.082059 CGCATGTAGTCACTTGTTGAAATC 58.918 41.667 0.00 0.00 35.39 2.17
2528 4701 5.106948 CGCATGTAGTCACTTGTTGAAATCT 60.107 40.000 0.00 0.00 35.39 2.40
2529 4702 6.310197 GCATGTAGTCACTTGTTGAAATCTC 58.690 40.000 0.00 0.00 35.39 2.75
2530 4703 6.148480 GCATGTAGTCACTTGTTGAAATCTCT 59.852 38.462 0.00 0.00 35.39 3.10
2531 4704 7.331934 GCATGTAGTCACTTGTTGAAATCTCTA 59.668 37.037 0.00 0.00 35.39 2.43
2532 4705 8.867935 CATGTAGTCACTTGTTGAAATCTCTAG 58.132 37.037 0.00 0.00 35.39 2.43
2533 4706 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
2534 4707 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2535 4708 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
2536 4709 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
2538 4711 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
2540 4713 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2886 5062 6.697395 TCTTACTGCATGCATATACGGTATT 58.303 36.000 22.97 0.00 0.00 1.89
2904 5080 6.775629 ACGGTATTTTATATTGCTGGTCCATT 59.224 34.615 0.00 0.00 0.00 3.16
2922 5098 8.269317 TGGTCCATTTTATATTCTACTCCGTTT 58.731 33.333 0.00 0.00 0.00 3.60
3080 5373 7.009907 ACGTTCTATAGCTTGTATCCGTTTTTC 59.990 37.037 0.00 0.00 0.00 2.29
3082 5375 6.285990 TCTATAGCTTGTATCCGTTTTTCCC 58.714 40.000 0.00 0.00 0.00 3.97
3240 5536 1.071542 TGATTGAGTTCTTCACGGGCA 59.928 47.619 0.00 0.00 34.94 5.36
3362 5658 1.178534 CGTGATTGTGGTTGCCCCTT 61.179 55.000 0.00 0.00 0.00 3.95
3506 5803 7.490402 ACGTAACGTTAGATCTTTAAATCCCAG 59.510 37.037 8.60 0.00 36.35 4.45
3510 5807 2.576615 AGATCTTTAAATCCCAGCCGC 58.423 47.619 0.00 0.00 0.00 6.53
3861 6158 2.617774 GCGTTATAGTCGGACTCTTCCT 59.382 50.000 15.05 0.00 40.23 3.36
3910 6207 3.362706 ACCTAGATGTCTGCCGAACTAA 58.637 45.455 0.00 0.00 0.00 2.24
4347 6942 3.939592 GGATCTTGGGCTAAACTACACAC 59.060 47.826 0.00 0.00 0.00 3.82
4392 6987 8.301002 GTGTATTTTTGGATGTTAGGCTTGTAA 58.699 33.333 0.00 0.00 0.00 2.41
4451 7047 2.932261 ACAAACCCAAGTTCACTCCTC 58.068 47.619 0.00 0.00 34.19 3.71
4766 7403 1.083806 GCTGATGTCATTGACGGCGA 61.084 55.000 16.62 0.00 34.95 5.54
4795 7432 8.260114 TGCAAATTGAGTATGATCTAGAACAGA 58.740 33.333 8.77 0.80 37.79 3.41
4904 7546 1.755179 CTTTCTGGCTATGGTGGTGG 58.245 55.000 0.00 0.00 0.00 4.61
4997 7639 1.688811 CCCGGTCCTCAATTTGGGA 59.311 57.895 0.00 0.32 39.03 4.37
5011 7653 0.036448 TTGGGAAATACGCAACCCGA 59.964 50.000 0.00 0.00 44.40 5.14
5165 7840 1.950909 TGTTTTCTTTTGGGATCGCGT 59.049 42.857 5.77 0.00 0.00 6.01
5212 7887 1.573932 CGGCACAGTGCGAAATCAA 59.426 52.632 19.42 0.00 46.21 2.57
5213 7888 0.453282 CGGCACAGTGCGAAATCAAG 60.453 55.000 19.42 0.00 46.21 3.02
5283 7963 4.981647 ACCAGAGGATAATTAATGTGGGGA 59.018 41.667 13.20 0.00 0.00 4.81
5284 7964 5.435041 ACCAGAGGATAATTAATGTGGGGAA 59.565 40.000 13.20 0.00 0.00 3.97
5518 8206 6.717084 GGAAGTTCTAGCCCTAATGCAATAAT 59.283 38.462 2.25 0.00 0.00 1.28
5599 8288 9.913451 CTATTACTAGTAGTACGTGTTCTTGAC 57.087 37.037 9.62 0.00 28.93 3.18
5765 8478 2.750948 TGCTTTGTAACTCTCCACGAC 58.249 47.619 0.00 0.00 0.00 4.34
5792 8505 2.315925 TGGATCTGGACGATGCTTTC 57.684 50.000 0.00 0.00 40.74 2.62
6001 8720 5.045869 CAGAAAACACTAACTATGGGAGGGA 60.046 44.000 0.00 0.00 0.00 4.20
6009 8728 0.918983 CTATGGGAGGGAGCCACAAA 59.081 55.000 0.00 0.00 0.00 2.83
6014 8733 1.549950 GGGAGGGAGCCACAAAATGAA 60.550 52.381 0.00 0.00 0.00 2.57
6049 8771 3.316868 CAGTTCCTAGAGGACCTTCGATC 59.683 52.174 0.00 0.00 45.39 3.69
6055 8777 4.218852 CCTAGAGGACCTTCGATCCAATAC 59.781 50.000 6.33 0.00 38.86 1.89
6116 8839 7.174413 TCAATATCATCAGGTTGGTTCAGAAA 58.826 34.615 0.00 0.00 0.00 2.52
6135 8858 5.819379 CAGAAACTGATAAAGCATGGAGCTA 59.181 40.000 0.00 0.00 43.35 3.32
6269 9003 3.956199 TCAGCAATTTGGGGATCTGAATC 59.044 43.478 0.00 0.00 0.00 2.52
6485 9229 5.126067 GTTTATCCATGTCAGTGCCTACAT 58.874 41.667 0.00 0.00 36.78 2.29
6486 9230 3.939740 ATCCATGTCAGTGCCTACATT 57.060 42.857 0.00 0.00 34.12 2.71
6558 9312 4.322650 GGAGATTCTCTGAGTATGGATGCC 60.323 50.000 13.22 0.00 0.00 4.40
6606 9361 3.771577 AGGTTGGTCTCTTTGGTACTG 57.228 47.619 0.00 0.00 0.00 2.74
6817 9577 0.106419 AAAGTGCGGTTCTTCCCCAA 60.106 50.000 0.00 0.00 0.00 4.12
6871 9631 6.480524 TTATCTCGTTGAACTCATGGTTTG 57.519 37.500 0.00 0.00 38.41 2.93
6968 9728 1.152631 CCCAAACCAACTCCCCGTT 60.153 57.895 0.00 0.00 35.88 4.44
7102 9862 1.005340 CGCTGCACTCTCTCATTTCC 58.995 55.000 0.00 0.00 0.00 3.13
7331 10102 1.371558 CCGCATTACTAGGCCTCCC 59.628 63.158 9.68 0.00 0.00 4.30
7332 10103 1.407656 CCGCATTACTAGGCCTCCCA 61.408 60.000 9.68 0.00 0.00 4.37
7333 10104 0.034059 CGCATTACTAGGCCTCCCAG 59.966 60.000 9.68 3.29 0.00 4.45
7334 10105 1.132500 GCATTACTAGGCCTCCCAGT 58.868 55.000 9.68 10.78 0.00 4.00
7335 10106 2.326428 GCATTACTAGGCCTCCCAGTA 58.674 52.381 9.68 9.53 0.00 2.74
7336 10107 2.704065 GCATTACTAGGCCTCCCAGTAA 59.296 50.000 22.89 22.89 38.20 2.24
7337 10108 3.494573 GCATTACTAGGCCTCCCAGTAAC 60.495 52.174 23.05 11.82 37.45 2.50
7338 10109 2.466547 TACTAGGCCTCCCAGTAACC 57.533 55.000 9.68 0.00 0.00 2.85
7339 10110 0.416231 ACTAGGCCTCCCAGTAACCA 59.584 55.000 9.68 0.00 0.00 3.67
7478 10249 1.690219 GGTCAGGTCCATCTGCCGAT 61.690 60.000 0.00 0.00 34.91 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 1.606889 AAGGAGGAGAACGGCGACT 60.607 57.895 16.62 12.80 0.00 4.18
80 81 3.009115 ATGGGGTCGTGGTGGAGG 61.009 66.667 0.00 0.00 0.00 4.30
147 148 3.313012 TCAAGAAGGGTACGACACATG 57.687 47.619 0.00 0.00 0.00 3.21
148 149 3.926616 CTTCAAGAAGGGTACGACACAT 58.073 45.455 1.86 0.00 34.87 3.21
172 173 4.596585 CCAAACACCCCAGGCGGT 62.597 66.667 0.00 0.00 36.18 5.68
195 196 1.369625 GCCACATGTTCCTCTAACCG 58.630 55.000 0.00 0.00 37.27 4.44
214 215 2.797156 GTGATCAATCACGATCCTTCCG 59.203 50.000 7.34 0.00 46.46 4.30
239 240 6.635755 AGTTGTAGTCAAAGAGATAAGAGCC 58.364 40.000 0.00 0.00 35.20 4.70
244 245 8.529476 GGAAGGTAGTTGTAGTCAAAGAGATAA 58.471 37.037 0.00 0.00 35.20 1.75
371 377 2.107950 TTGTAGCGTGGAGGGAAATG 57.892 50.000 0.00 0.00 0.00 2.32
391 397 0.035534 AGAGAGAGAGAGAGCGCACA 60.036 55.000 11.47 0.00 0.00 4.57
394 400 1.202580 AGAGAGAGAGAGAGAGAGCGC 60.203 57.143 0.00 0.00 0.00 5.92
395 401 2.363680 AGAGAGAGAGAGAGAGAGAGCG 59.636 54.545 0.00 0.00 0.00 5.03
438 452 5.369404 AGTCTGGTCATATCAGAGAGAGAGA 59.631 44.000 0.00 0.00 41.32 3.10
440 454 5.645056 AGTCTGGTCATATCAGAGAGAGA 57.355 43.478 0.00 0.00 41.32 3.10
441 455 5.827267 TGAAGTCTGGTCATATCAGAGAGAG 59.173 44.000 0.00 0.00 41.32 3.20
442 456 5.760131 TGAAGTCTGGTCATATCAGAGAGA 58.240 41.667 0.00 0.00 41.32 3.10
443 457 5.593909 ACTGAAGTCTGGTCATATCAGAGAG 59.406 44.000 7.51 0.00 41.32 3.20
444 458 5.359292 CACTGAAGTCTGGTCATATCAGAGA 59.641 44.000 7.51 0.00 41.32 3.10
445 459 5.590145 CACTGAAGTCTGGTCATATCAGAG 58.410 45.833 7.51 0.00 41.32 3.35
448 462 3.118629 GGCACTGAAGTCTGGTCATATCA 60.119 47.826 0.00 0.00 0.00 2.15
450 464 3.110705 AGGCACTGAAGTCTGGTCATAT 58.889 45.455 0.00 0.00 37.18 1.78
457 471 1.739562 GGCGAGGCACTGAAGTCTG 60.740 63.158 0.00 0.00 41.55 3.51
540 590 0.036388 CTAACCCCATCTGTGCGTGT 60.036 55.000 0.00 0.00 0.00 4.49
626 691 7.255070 CCAAGAACAAGAAAAGGAAGAGAGAAG 60.255 40.741 0.00 0.00 0.00 2.85
627 692 6.543831 CCAAGAACAAGAAAAGGAAGAGAGAA 59.456 38.462 0.00 0.00 0.00 2.87
628 693 6.058183 CCAAGAACAAGAAAAGGAAGAGAGA 58.942 40.000 0.00 0.00 0.00 3.10
629 694 6.058183 TCCAAGAACAAGAAAAGGAAGAGAG 58.942 40.000 0.00 0.00 0.00 3.20
630 695 6.001449 TCCAAGAACAAGAAAAGGAAGAGA 57.999 37.500 0.00 0.00 0.00 3.10
631 696 6.890979 ATCCAAGAACAAGAAAAGGAAGAG 57.109 37.500 0.00 0.00 0.00 2.85
632 697 8.796475 CATAATCCAAGAACAAGAAAAGGAAGA 58.204 33.333 0.00 0.00 0.00 2.87
633 698 8.031277 CCATAATCCAAGAACAAGAAAAGGAAG 58.969 37.037 0.00 0.00 0.00 3.46
634 699 7.508977 ACCATAATCCAAGAACAAGAAAAGGAA 59.491 33.333 0.00 0.00 0.00 3.36
635 700 7.010160 ACCATAATCCAAGAACAAGAAAAGGA 58.990 34.615 0.00 0.00 0.00 3.36
636 701 7.232118 ACCATAATCCAAGAACAAGAAAAGG 57.768 36.000 0.00 0.00 0.00 3.11
639 704 8.802267 CCTAAACCATAATCCAAGAACAAGAAA 58.198 33.333 0.00 0.00 0.00 2.52
640 705 7.947890 ACCTAAACCATAATCCAAGAACAAGAA 59.052 33.333 0.00 0.00 0.00 2.52
641 706 7.466804 ACCTAAACCATAATCCAAGAACAAGA 58.533 34.615 0.00 0.00 0.00 3.02
642 707 7.703058 ACCTAAACCATAATCCAAGAACAAG 57.297 36.000 0.00 0.00 0.00 3.16
643 708 9.238368 CTAACCTAAACCATAATCCAAGAACAA 57.762 33.333 0.00 0.00 0.00 2.83
644 709 7.338449 GCTAACCTAAACCATAATCCAAGAACA 59.662 37.037 0.00 0.00 0.00 3.18
645 710 7.201794 GGCTAACCTAAACCATAATCCAAGAAC 60.202 40.741 0.00 0.00 0.00 3.01
646 711 6.831868 GGCTAACCTAAACCATAATCCAAGAA 59.168 38.462 0.00 0.00 0.00 2.52
647 712 6.362248 GGCTAACCTAAACCATAATCCAAGA 58.638 40.000 0.00 0.00 0.00 3.02
648 713 6.635030 GGCTAACCTAAACCATAATCCAAG 57.365 41.667 0.00 0.00 0.00 3.61
664 729 0.400594 ACACACTTGGGAGGCTAACC 59.599 55.000 0.92 0.92 0.00 2.85
665 730 1.809684 GACACACTTGGGAGGCTAAC 58.190 55.000 0.00 0.00 0.00 2.34
666 731 0.320374 CGACACACTTGGGAGGCTAA 59.680 55.000 0.00 0.00 0.00 3.09
667 732 0.541063 TCGACACACTTGGGAGGCTA 60.541 55.000 0.00 0.00 0.00 3.93
668 733 1.821061 CTCGACACACTTGGGAGGCT 61.821 60.000 0.00 0.00 0.00 4.58
669 734 1.374758 CTCGACACACTTGGGAGGC 60.375 63.158 0.00 0.00 0.00 4.70
670 735 1.293498 CCTCGACACACTTGGGAGG 59.707 63.158 0.00 0.00 39.68 4.30
671 736 0.393077 AACCTCGACACACTTGGGAG 59.607 55.000 0.00 0.00 0.00 4.30
672 737 0.834612 AAACCTCGACACACTTGGGA 59.165 50.000 0.00 0.00 0.00 4.37
673 738 1.602377 GAAAACCTCGACACACTTGGG 59.398 52.381 0.00 0.00 0.00 4.12
674 739 2.561569 AGAAAACCTCGACACACTTGG 58.438 47.619 0.00 0.00 0.00 3.61
675 740 3.374058 ACAAGAAAACCTCGACACACTTG 59.626 43.478 0.00 0.00 39.17 3.16
676 741 3.606687 ACAAGAAAACCTCGACACACTT 58.393 40.909 0.00 0.00 0.00 3.16
677 742 3.261981 ACAAGAAAACCTCGACACACT 57.738 42.857 0.00 0.00 0.00 3.55
678 743 3.621715 AGAACAAGAAAACCTCGACACAC 59.378 43.478 0.00 0.00 0.00 3.82
679 744 3.869065 AGAACAAGAAAACCTCGACACA 58.131 40.909 0.00 0.00 0.00 3.72
680 745 4.495844 CCAAGAACAAGAAAACCTCGACAC 60.496 45.833 0.00 0.00 0.00 3.67
681 746 3.625764 CCAAGAACAAGAAAACCTCGACA 59.374 43.478 0.00 0.00 0.00 4.35
682 747 3.875134 TCCAAGAACAAGAAAACCTCGAC 59.125 43.478 0.00 0.00 0.00 4.20
683 748 4.145365 TCCAAGAACAAGAAAACCTCGA 57.855 40.909 0.00 0.00 0.00 4.04
684 749 5.438761 AATCCAAGAACAAGAAAACCTCG 57.561 39.130 0.00 0.00 0.00 4.63
685 750 7.039714 ACCATAATCCAAGAACAAGAAAACCTC 60.040 37.037 0.00 0.00 0.00 3.85
686 751 6.782494 ACCATAATCCAAGAACAAGAAAACCT 59.218 34.615 0.00 0.00 0.00 3.50
687 752 6.993079 ACCATAATCCAAGAACAAGAAAACC 58.007 36.000 0.00 0.00 0.00 3.27
688 753 8.887036 AAACCATAATCCAAGAACAAGAAAAC 57.113 30.769 0.00 0.00 0.00 2.43
689 754 9.974980 GTAAACCATAATCCAAGAACAAGAAAA 57.025 29.630 0.00 0.00 0.00 2.29
690 755 9.137459 TGTAAACCATAATCCAAGAACAAGAAA 57.863 29.630 0.00 0.00 0.00 2.52
691 756 8.698973 TGTAAACCATAATCCAAGAACAAGAA 57.301 30.769 0.00 0.00 0.00 2.52
692 757 8.877864 ATGTAAACCATAATCCAAGAACAAGA 57.122 30.769 0.00 0.00 29.82 3.02
908 1399 3.013417 AGAGAGGATGGAAAAGAGAGGGA 59.987 47.826 0.00 0.00 0.00 4.20
922 1611 9.343994 AGAATTATAGAGAGAGAGAGAGAGGAT 57.656 37.037 0.00 0.00 0.00 3.24
1010 1727 1.266989 CACGAAACCAGGCTTTCTTCC 59.733 52.381 10.82 0.00 0.00 3.46
1053 1776 4.000988 AGCGGGAGTTTGTACTAACAATG 58.999 43.478 19.88 9.28 44.85 2.82
1055 1778 3.756933 AGCGGGAGTTTGTACTAACAA 57.243 42.857 19.88 0.00 43.85 2.83
1654 3821 9.924650 ATAGATGGTTGTAGGATACGTATTTTC 57.075 33.333 9.92 0.00 46.99 2.29
1713 3880 6.187682 AGGGTGCTTAAGCTACACAAATATT 58.812 36.000 26.90 6.38 42.66 1.28
2043 4214 3.617263 CGAGGATAAAGTTTCCCGTCAAG 59.383 47.826 0.00 0.00 33.45 3.02
2330 4502 4.862574 TGTTTAAGTGCGCTATGAGTACAG 59.137 41.667 9.73 0.00 0.00 2.74
2378 4550 5.804639 AGTACATTGGAAGTAAGCATGACA 58.195 37.500 0.00 0.00 0.00 3.58
2397 4569 2.927553 TTTAGGAACGGAGCGAGTAC 57.072 50.000 0.00 0.00 0.00 2.73
2403 4575 6.679327 AAGACAAATATTTAGGAACGGAGC 57.321 37.500 0.00 0.00 0.00 4.70
2426 4599 6.094464 TCGTAGTCCATTCGAAATGTCTAGAA 59.906 38.462 0.00 0.00 0.00 2.10
2427 4600 5.587443 TCGTAGTCCATTCGAAATGTCTAGA 59.413 40.000 0.00 0.00 0.00 2.43
2428 4601 5.817988 TCGTAGTCCATTCGAAATGTCTAG 58.182 41.667 0.00 0.00 0.00 2.43
2429 4602 5.823209 TCGTAGTCCATTCGAAATGTCTA 57.177 39.130 0.00 1.26 0.00 2.59
2430 4603 4.713824 TCGTAGTCCATTCGAAATGTCT 57.286 40.909 0.00 2.24 0.00 3.41
2431 4604 5.773239 TTTCGTAGTCCATTCGAAATGTC 57.227 39.130 0.00 0.00 44.58 3.06
2436 4609 4.096231 TCCGTATTTCGTAGTCCATTCGAA 59.904 41.667 0.00 0.00 40.84 3.71
2438 4611 3.956233 TCCGTATTTCGTAGTCCATTCG 58.044 45.455 0.00 0.00 37.94 3.34
2439 4612 5.287226 ACATCCGTATTTCGTAGTCCATTC 58.713 41.667 0.00 0.00 37.94 2.67
2440 4613 5.272283 ACATCCGTATTTCGTAGTCCATT 57.728 39.130 0.00 0.00 37.94 3.16
2441 4614 4.931661 ACATCCGTATTTCGTAGTCCAT 57.068 40.909 0.00 0.00 37.94 3.41
2443 4616 5.766222 ACATACATCCGTATTTCGTAGTCC 58.234 41.667 0.00 0.00 36.11 3.85
2445 4618 7.227314 TGTCTACATACATCCGTATTTCGTAGT 59.773 37.037 0.00 0.00 36.11 2.73
2446 4619 7.578852 TGTCTACATACATCCGTATTTCGTAG 58.421 38.462 0.00 0.00 36.11 3.51
2447 4620 7.495135 TGTCTACATACATCCGTATTTCGTA 57.505 36.000 0.00 0.00 36.11 3.43
2448 4621 6.381481 TGTCTACATACATCCGTATTTCGT 57.619 37.500 0.00 0.00 36.11 3.85
2449 4622 9.569167 AATATGTCTACATACATCCGTATTTCG 57.431 33.333 4.98 0.00 41.15 3.46
2479 4652 9.055248 CGAAACAAAATGAATGAATCTACACTC 57.945 33.333 0.00 0.00 0.00 3.51
2480 4653 7.538678 GCGAAACAAAATGAATGAATCTACACT 59.461 33.333 0.00 0.00 0.00 3.55
2481 4654 7.325821 TGCGAAACAAAATGAATGAATCTACAC 59.674 33.333 0.00 0.00 0.00 2.90
2482 4655 7.366513 TGCGAAACAAAATGAATGAATCTACA 58.633 30.769 0.00 0.00 0.00 2.74
2483 4656 7.795431 TGCGAAACAAAATGAATGAATCTAC 57.205 32.000 0.00 0.00 0.00 2.59
2484 4657 8.028354 ACATGCGAAACAAAATGAATGAATCTA 58.972 29.630 0.00 0.00 0.00 1.98
2485 4658 6.869913 ACATGCGAAACAAAATGAATGAATCT 59.130 30.769 0.00 0.00 0.00 2.40
2486 4659 7.052565 ACATGCGAAACAAAATGAATGAATC 57.947 32.000 0.00 0.00 0.00 2.52
2487 4660 7.814107 ACTACATGCGAAACAAAATGAATGAAT 59.186 29.630 0.00 0.00 0.00 2.57
2488 4661 7.144661 ACTACATGCGAAACAAAATGAATGAA 58.855 30.769 0.00 0.00 0.00 2.57
2489 4662 6.676950 ACTACATGCGAAACAAAATGAATGA 58.323 32.000 0.00 0.00 0.00 2.57
2490 4663 6.581919 TGACTACATGCGAAACAAAATGAATG 59.418 34.615 0.00 0.00 0.00 2.67
2491 4664 6.582295 GTGACTACATGCGAAACAAAATGAAT 59.418 34.615 0.00 0.00 0.00 2.57
2492 4665 5.912396 GTGACTACATGCGAAACAAAATGAA 59.088 36.000 0.00 0.00 0.00 2.57
2493 4666 5.238432 AGTGACTACATGCGAAACAAAATGA 59.762 36.000 0.00 0.00 0.00 2.57
2494 4667 5.451908 AGTGACTACATGCGAAACAAAATG 58.548 37.500 0.00 0.00 0.00 2.32
2495 4668 5.689383 AGTGACTACATGCGAAACAAAAT 57.311 34.783 0.00 0.00 0.00 1.82
2496 4669 5.163703 ACAAGTGACTACATGCGAAACAAAA 60.164 36.000 0.00 0.00 0.00 2.44
2497 4670 4.334203 ACAAGTGACTACATGCGAAACAAA 59.666 37.500 0.00 0.00 0.00 2.83
2498 4671 3.874543 ACAAGTGACTACATGCGAAACAA 59.125 39.130 0.00 0.00 0.00 2.83
2499 4672 3.462982 ACAAGTGACTACATGCGAAACA 58.537 40.909 0.00 0.00 0.00 2.83
2500 4673 4.025229 TCAACAAGTGACTACATGCGAAAC 60.025 41.667 0.00 0.00 0.00 2.78
2501 4674 4.123506 TCAACAAGTGACTACATGCGAAA 58.876 39.130 0.00 0.00 0.00 3.46
2502 4675 3.723260 TCAACAAGTGACTACATGCGAA 58.277 40.909 0.00 0.00 0.00 4.70
2503 4676 3.378911 TCAACAAGTGACTACATGCGA 57.621 42.857 0.00 0.00 0.00 5.10
2504 4677 4.466567 TTTCAACAAGTGACTACATGCG 57.533 40.909 0.00 0.00 35.39 4.73
2505 4678 6.148480 AGAGATTTCAACAAGTGACTACATGC 59.852 38.462 0.00 0.00 35.39 4.06
2506 4679 7.664082 AGAGATTTCAACAAGTGACTACATG 57.336 36.000 0.00 0.00 35.39 3.21
2507 4680 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
2508 4681 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
2509 4682 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
2510 4683 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
2511 4684 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
2512 4685 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
2513 4686 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
2514 4687 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
2515 4688 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2528 4701 9.595823 CGGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
2529 4702 9.595823 TCGGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
2530 4703 9.595823 CTCGGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
2531 4704 7.553044 CCTCGGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
2532 4705 7.201705 CCCTCGGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
2533 4706 6.602009 CCCTCGGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2534 4707 6.069847 TCCCTCGGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2535 4708 5.427481 TCCCTCGGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2536 4709 5.677567 TCCCTCGGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2538 4711 5.681639 ACTCCCTCGGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2540 4713 6.141790 ACTACTCCCTCGGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
2547 4720 1.001282 AGACTACTCCCTCGGTTCCT 58.999 55.000 0.00 0.00 0.00 3.36
2550 4723 5.071370 CACATATAGACTACTCCCTCGGTT 58.929 45.833 0.00 0.00 0.00 4.44
2552 4725 4.653868 ACACATATAGACTACTCCCTCGG 58.346 47.826 0.00 0.00 0.00 4.63
2553 4726 9.263538 GATATACACATATAGACTACTCCCTCG 57.736 40.741 0.00 0.00 0.00 4.63
2600 4773 7.094848 GCATAAAGGAAGCAAAAATAGGCAAAA 60.095 33.333 0.00 0.00 0.00 2.44
3080 5373 0.037046 GCATGCAACTTTTGAGGGGG 60.037 55.000 14.21 0.00 0.00 5.40
3082 5375 2.036217 TCTTGCATGCAACTTTTGAGGG 59.964 45.455 28.80 15.57 0.00 4.30
3240 5536 2.076207 ACAGGCCGGTTTAAAAAGGT 57.924 45.000 1.28 0.00 0.00 3.50
3398 5694 1.013596 CACGTGCCAAGACACAAGAA 58.986 50.000 0.82 0.00 40.73 2.52
3489 5786 3.496160 GGCGGCTGGGATTTAAAGATCTA 60.496 47.826 0.00 0.00 0.00 1.98
3506 5803 4.636206 CCCTTAATTTCAGATATAGGCGGC 59.364 45.833 0.00 0.00 0.00 6.53
3510 5807 7.038941 ACCTCGACCCTTAATTTCAGATATAGG 60.039 40.741 0.00 0.00 0.00 2.57
3931 6228 6.718388 ACACTAGCTTACGTTTTGGTTTTAC 58.282 36.000 0.00 0.00 0.00 2.01
3935 6232 3.811497 GGACACTAGCTTACGTTTTGGTT 59.189 43.478 0.00 0.00 0.00 3.67
4041 6414 5.048782 ACATCATGTGTCACGTATTTGCTTT 60.049 36.000 0.00 0.00 35.77 3.51
4392 6987 7.663905 GGGGAACTAATTGGCTTTTAACAATTT 59.336 33.333 7.78 0.00 42.78 1.82
4596 7204 7.297936 TGTGTTTGGATAGACAAGAGTTAGA 57.702 36.000 0.00 0.00 0.00 2.10
4795 7432 8.861086 CACTACTGTGATAGGGTATACTTTGAT 58.139 37.037 2.25 0.00 46.55 2.57
4904 7546 3.951979 AATATGCTCGCACAAGTAAGC 57.048 42.857 0.00 0.00 35.31 3.09
4997 7639 3.926821 AAAATGTCGGGTTGCGTATTT 57.073 38.095 0.00 0.00 0.00 1.40
5212 7887 1.484240 GGCTCAAGAGACTACCATGCT 59.516 52.381 0.32 0.00 32.39 3.79
5213 7888 1.946745 GGCTCAAGAGACTACCATGC 58.053 55.000 0.32 0.00 32.39 4.06
5261 7941 5.582950 TCCCCACATTAATTATCCTCTGG 57.417 43.478 0.00 0.00 0.00 3.86
5283 7963 7.415206 GGCTTCGTATTGGTCATGATAAACTTT 60.415 37.037 0.00 0.00 0.00 2.66
5284 7964 6.038271 GGCTTCGTATTGGTCATGATAAACTT 59.962 38.462 0.00 0.00 0.00 2.66
5347 8027 3.833070 AGTCGAACTGTCAGGGAATAGTT 59.167 43.478 4.53 0.00 36.18 2.24
5414 8094 6.069963 GGGATATGGCAGAATAGTACCTCATT 60.070 42.308 0.00 0.00 0.00 2.57
5569 8258 9.528018 AGAACACGTACTACTAGTAATAGAGAC 57.472 37.037 3.83 0.00 31.62 3.36
5577 8266 6.395089 CGTCAAGAACACGTACTACTAGTA 57.605 41.667 1.89 1.89 32.41 1.82
5578 8267 5.274881 CGTCAAGAACACGTACTACTAGT 57.725 43.478 0.00 0.00 32.41 2.57
5599 8288 6.002704 ACATACTATTCCAGGAGTAGGTACG 58.997 44.000 20.35 9.98 40.37 3.67
5765 8478 0.528466 CGTCCAGATCCATCACACCG 60.528 60.000 0.00 0.00 0.00 4.94
5792 8505 1.153549 GAACCTAGCTCTGTGCCCG 60.154 63.158 0.00 0.00 44.23 6.13
6001 8720 4.344679 TCATTGGAAGTTCATTTTGTGGCT 59.655 37.500 5.01 0.00 0.00 4.75
6009 8728 6.723052 AGGAACTGATTCATTGGAAGTTCATT 59.277 34.615 13.92 1.68 37.41 2.57
6014 8733 6.352565 CCTCTAGGAACTGATTCATTGGAAGT 60.353 42.308 0.00 0.00 41.52 3.01
6485 9229 3.701040 TCGTCCTGATCTCACATCATCAA 59.299 43.478 0.00 0.00 0.00 2.57
6486 9230 3.290710 TCGTCCTGATCTCACATCATCA 58.709 45.455 0.00 0.00 0.00 3.07
6558 9312 2.809861 AAGCCACTGCCGTCCATCTG 62.810 60.000 0.00 0.00 38.69 2.90
6606 9361 1.281899 GTACTGAGCGAAGATGCACC 58.718 55.000 0.00 0.00 37.31 5.01
6695 9450 6.198029 CAGCGCACATAAGCTAGATATGTATC 59.802 42.308 11.47 12.22 40.96 2.24
6699 9454 4.488879 TCAGCGCACATAAGCTAGATATG 58.511 43.478 11.47 12.11 42.52 1.78
6817 9577 7.166167 CGGGCTTAACCATTAATATTCCTAGT 58.834 38.462 0.00 0.00 42.05 2.57
6871 9631 6.581542 CGACATAGAAACGATATACCAGAACC 59.418 42.308 0.00 0.00 0.00 3.62
6968 9728 0.179936 TATCATGGCCATGCACGACA 59.820 50.000 36.47 21.26 38.65 4.35
7102 9862 3.554692 GCGGATCGTGCGTTCAGG 61.555 66.667 5.26 0.00 32.35 3.86
7188 9948 1.600916 GCGGCACTGAAGAAGGGTT 60.601 57.895 0.00 0.00 0.00 4.11
7331 10102 0.254178 AGGCCTGAGCATGGTTACTG 59.746 55.000 3.11 0.00 42.56 2.74
7332 10103 0.995024 AAGGCCTGAGCATGGTTACT 59.005 50.000 5.69 0.00 42.56 2.24
7333 10104 1.383523 GAAGGCCTGAGCATGGTTAC 58.616 55.000 5.69 0.00 42.56 2.50
7334 10105 0.255890 GGAAGGCCTGAGCATGGTTA 59.744 55.000 5.69 0.00 42.56 2.85
7335 10106 1.000396 GGAAGGCCTGAGCATGGTT 60.000 57.895 5.69 0.00 42.56 3.67
7336 10107 2.679716 GGAAGGCCTGAGCATGGT 59.320 61.111 5.69 0.00 42.56 3.55
7337 10108 2.123982 GGGAAGGCCTGAGCATGG 60.124 66.667 5.69 0.00 42.56 3.66
7338 10109 1.453379 CTGGGAAGGCCTGAGCATG 60.453 63.158 5.69 0.00 42.56 4.06
7339 10110 0.621571 TACTGGGAAGGCCTGAGCAT 60.622 55.000 5.69 0.00 42.56 3.79
7400 10171 3.114616 CAGCACGACCAAGCGAGG 61.115 66.667 0.00 0.00 35.48 4.63
7478 10249 3.258228 AAGGCTCATGGCACGCAGA 62.258 57.895 8.20 0.00 44.01 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.