AutoCloner

Multiple sequence alignment - TraesCS2B01G503400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2B01G503400	chr2B	100.000	4002	0	0	1	4002	697715188	697711187	0.000000e+00	7391.0
1	TraesCS2B01G503400	chr2B	100.000	3579	0	0	5348	8926	697709841	697706263	0.000000e+00	6610.0
2	TraesCS2B01G503400	chr2B	100.000	753	0	0	4319	5071	697710870	697710118	0.000000e+00	1391.0
3	TraesCS2B01G503400	chr2B	97.059	442	13	0	2397	2838	507760546	507760105	0.000000e+00	745.0
4	TraesCS2B01G503400	chr2B	90.438	502	20	4	8450	8926	93386786	93387284	3.520000e-178	636.0
5	TraesCS2B01G503400	chr2B	88.050	318	32	5	555	871	41019745	41020057	1.090000e-98	372.0
6	TraesCS2B01G503400	chr2B	95.161	124	5	1	8000	8123	385567487	385567609	2.540000e-45	195.0
7	TraesCS2B01G503400	chr2B	95.082	122	6	0	7998	8119	238958541	238958662	9.150000e-45	193.0
8	TraesCS2B01G503400	chr2D	95.587	2674	69	26	5349	8004	579759458	579756816	0.000000e+00	4239.0
9	TraesCS2B01G503400	chr2D	93.920	1546	68	5	869	2412	579761231	579759710	0.000000e+00	2311.0
10	TraesCS2B01G503400	chr2D	80.766	1201	197	20	6815	8003	622843181	622842003	0.000000e+00	907.0
11	TraesCS2B01G503400	chr2D	94.304	316	13	3	8139	8449	579756766	579756451	6.270000e-131	479.0
12	TraesCS2B01G503400	chr2D	84.855	482	49	13	8450	8924	69803532	69803068	1.760000e-126	464.0
13	TraesCS2B01G503400	chr2D	80.840	595	84	16	1107	1671	622845858	622845264	2.960000e-119	440.0
14	TraesCS2B01G503400	chr2D	91.277	321	23	4	551	870	555068320	555068004	4.950000e-117	433.0
15	TraesCS2B01G503400	chr2D	91.220	205	17	1	5846	6050	622843869	622843666	2.450000e-70	278.0
16	TraesCS2B01G503400	chr2D	88.780	205	16	6	4870	5071	579759724	579759524	2.490000e-60	244.0
17	TraesCS2B01G503400	chr2D	89.444	180	8	4	65	244	579761764	579761596	5.430000e-52	217.0
18	TraesCS2B01G503400	chr2D	83.333	234	28	5	1933	2162	622844972	622844746	1.170000e-48	206.0
19	TraesCS2B01G503400	chr2D	100.000	32	0	0	2216	2247	619562538	619562507	9.680000e-05	60.2
20	TraesCS2B01G503400	chr2A	92.497	1586	89	19	6434	8003	717386219	717384648	0.000000e+00	2242.0
21	TraesCS2B01G503400	chr2A	91.171	1563	112	19	869	2412	717389064	717387509	0.000000e+00	2098.0
22	TraesCS2B01G503400	chr2A	92.897	1070	49	12	5348	6412	717387255	717386208	0.000000e+00	1530.0
23	TraesCS2B01G503400	chr2A	89.536	1185	78	22	2847	4002	637698092	637699259	0.000000e+00	1459.0
24	TraesCS2B01G503400	chr2A	91.828	465	33	4	4319	4778	637699388	637699852	2.100000e-180	643.0
25	TraesCS2B01G503400	chr2A	91.509	318	24	3	8134	8449	717384601	717384285	1.380000e-117	435.0
26	TraesCS2B01G503400	chr2A	89.474	247	9	6	3	244	717389471	717389237	6.780000e-76	296.0
27	TraesCS2B01G503400	chr4D	90.633	1185	77	18	2847	4002	389194870	389193691	0.000000e+00	1543.0
28	TraesCS2B01G503400	chr3A	89.702	1175	86	19	2847	4002	102492917	102494075	0.000000e+00	1467.0
29	TraesCS2B01G503400	chr3A	89.532	1175	83	17	2847	4002	102437967	102439120	0.000000e+00	1452.0
30	TraesCS2B01G503400	chr3A	85.774	1188	108	34	2844	4002	609822021	609823176	0.000000e+00	1201.0
31	TraesCS2B01G503400	chr3A	88.991	327	29	4	239	560	199563286	199563610	1.810000e-106	398.0
32	TraesCS2B01G503400	chr3A	87.390	341	33	5	243	573	371265635	371265295	5.060000e-102	383.0
33	TraesCS2B01G503400	chr7D	88.260	1201	77	34	2847	4002	214106958	214108139	0.000000e+00	1378.0
34	TraesCS2B01G503400	chr7D	90.237	717	46	15	3293	4001	598742953	598743653	0.000000e+00	915.0
35	TraesCS2B01G503400	chr7D	79.407	1214	190	30	6821	8004	631848873	631850056	0.000000e+00	802.0
36	TraesCS2B01G503400	chr7D	86.848	479	43	11	8450	8924	590058531	590058069	1.330000e-142	518.0
37	TraesCS2B01G503400	chr7D	84.929	491	40	14	8449	8924	597304070	597304541	4.880000e-127	466.0
38	TraesCS2B01G503400	chr7D	89.222	334	27	9	4320	4648	263970336	263970007	8.340000e-110	409.0
39	TraesCS2B01G503400	chr7D	82.468	462	77	2	6819	7280	631760730	631761187	1.400000e-107	401.0
40	TraesCS2B01G503400	chr7D	88.589	333	26	6	243	565	154182209	154181879	2.340000e-105	394.0
41	TraesCS2B01G503400	chr7D	78.964	618	91	17	1153	1731	631846096	631846713	1.410000e-102	385.0
42	TraesCS2B01G503400	chr7D	87.349	332	35	7	546	876	416240086	416239761	3.040000e-99	374.0
43	TraesCS2B01G503400	chr7D	88.837	215	18	4	5841	6050	631848094	631848307	8.890000e-65	259.0
44	TraesCS2B01G503400	chr7D	100.000	29	0	0	2214	2242	177117152	177117180	5.000000e-03	54.7
45	TraesCS2B01G503400	chr5B	87.846	1193	94	24	2846	4002	470181558	470182735	0.000000e+00	1352.0
46	TraesCS2B01G503400	chr5B	93.666	521	26	6	4351	4869	436622162	436621647	0.000000e+00	773.0
47	TraesCS2B01G503400	chr5B	90.504	337	22	6	4319	4648	470182858	470183191	3.830000e-118	436.0
48	TraesCS2B01G503400	chr5B	93.182	132	7	2	7989	8118	407639429	407639560	9.150000e-45	193.0
49	TraesCS2B01G503400	chr1D	87.718	1205	85	29	2846	3998	329674006	329672813	0.000000e+00	1347.0
50	TraesCS2B01G503400	chr1D	78.930	1196	211	24	6817	8003	464238901	464237738	0.000000e+00	774.0
51	TraesCS2B01G503400	chr1D	85.371	499	42	16	8430	8924	468377816	468378287	1.040000e-133	488.0
52	TraesCS2B01G503400	chr1D	86.788	439	38	9	8491	8924	479111272	479110849	1.050000e-128	472.0
53	TraesCS2B01G503400	chr1D	89.877	326	26	5	243	564	257307636	257307314	6.450000e-111	412.0
54	TraesCS2B01G503400	chr3B	86.711	1204	101	23	2850	4002	39645653	39644458	0.000000e+00	1282.0
55	TraesCS2B01G503400	chr3B	89.792	578	37	9	2847	3402	135770850	135771427	0.000000e+00	721.0
56	TraesCS2B01G503400	chr3B	89.483	580	37	8	2847	3402	135815835	135816414	0.000000e+00	712.0
57	TraesCS2B01G503400	chr3B	90.157	508	19	6	8448	8926	586868425	586868930	4.550000e-177	632.0
58	TraesCS2B01G503400	chr3B	85.435	460	57	8	2396	2852	801017709	801017257	3.770000e-128	470.0
59	TraesCS2B01G503400	chr3B	94.983	299	13	2	574	871	627755055	627755352	1.360000e-127	468.0
60	TraesCS2B01G503400	chr3B	94.949	297	13	2	575	870	170931522	170931817	1.760000e-126	464.0
61	TraesCS2B01G503400	chr3B	93.506	308	17	3	567	873	762976396	762976091	1.060000e-123	455.0
62	TraesCS2B01G503400	chr3B	90.214	327	25	7	550	871	776389882	776389558	3.850000e-113	420.0
63	TraesCS2B01G503400	chr3B	88.754	329	29	8	551	874	593669006	593668681	6.490000e-106	396.0
64	TraesCS2B01G503400	chr3B	93.023	129	7	2	7997	8124	3262190	3262063	4.250000e-43	187.0
65	TraesCS2B01G503400	chr3B	100.000	28	0	0	4821	4848	813791265	813791292	1.600000e-02	52.8
66	TraesCS2B01G503400	chr6B	90.196	918	58	19	2847	3744	58071823	58072728	0.000000e+00	1168.0
67	TraesCS2B01G503400	chr6B	89.350	554	33	13	4340	4869	58073255	58073806	0.000000e+00	673.0
68	TraesCS2B01G503400	chr6B	90.099	505	17	6	8448	8926	697928927	697929424	7.610000e-175	625.0
69	TraesCS2B01G503400	chr6B	87.719	513	28	11	8446	8926	669382698	669382189	4.680000e-157	566.0
70	TraesCS2B01G503400	chr6B	88.724	337	26	9	4320	4648	693959237	693959569	1.400000e-107	401.0
71	TraesCS2B01G503400	chr6B	88.450	329	31	5	547	870	5560159	5559833	3.020000e-104	390.0
72	TraesCS2B01G503400	chr6B	88.291	316	31	6	557	871	464112690	464113000	3.040000e-99	374.0
73	TraesCS2B01G503400	chr6B	88.182	330	12	4	8440	8743	7141928	7142256	1.420000e-97	368.0
74	TraesCS2B01G503400	chr6B	94.495	218	11	1	8442	8658	690175734	690175517	1.440000e-87	335.0
75	TraesCS2B01G503400	chr6B	86.550	171	23	0	5875	6045	710098831	710099001	1.180000e-43	189.0
76	TraesCS2B01G503400	chr6B	90.780	141	8	5	7983	8121	421004858	421004995	5.500000e-42	183.0
77	TraesCS2B01G503400	chr6D	84.465	1178	134	30	2850	4002	452130712	452129559	0.000000e+00	1116.0
78	TraesCS2B01G503400	chr6D	85.965	171	24	0	5875	6045	465205121	465205291	5.500000e-42	183.0
79	TraesCS2B01G503400	chr5D	90.223	716	44	18	3293	4001	446080064	446079368	0.000000e+00	911.0
80	TraesCS2B01G503400	chr5D	88.562	577	35	14	4319	4869	382093517	382092946	0.000000e+00	671.0
81	TraesCS2B01G503400	chr5D	89.939	328	22	9	4325	4648	550982824	550982504	6.450000e-111	412.0
82	TraesCS2B01G503400	chr5D	90.336	238	22	1	2593	2830	324687212	324687448	2.420000e-80	311.0
83	TraesCS2B01G503400	chr5D	93.689	206	13	0	2396	2601	324685124	324685329	8.700000e-80	309.0
84	TraesCS2B01G503400	chr5D	90.132	152	14	1	2398	2548	373765288	373765137	7.070000e-46	196.0
85	TraesCS2B01G503400	chr3D	92.982	570	25	8	2847	3407	385435302	385435865	0.000000e+00	817.0
86	TraesCS2B01G503400	chr3D	89.649	541	28	9	4319	4839	385436619	385437151	0.000000e+00	664.0
87	TraesCS2B01G503400	chr3D	86.031	451	59	4	2396	2844	159629459	159629011	1.740000e-131	481.0
88	TraesCS2B01G503400	chr3D	84.679	483	47	11	8450	8924	577170657	577170194	2.940000e-124	457.0
89	TraesCS2B01G503400	chr3D	88.991	327	27	4	243	560	557958051	557958377	6.490000e-106	396.0
90	TraesCS2B01G503400	chr3D	93.137	102	7	0	2445	2546	13292443	13292342	5.580000e-32	150.0
91	TraesCS2B01G503400	chr7A	79.553	1164	178	41	6815	7931	736524380	736523230	0.000000e+00	776.0
92	TraesCS2B01G503400	chr7A	86.154	650	62	12	242	871	728325011	728324370	0.000000e+00	676.0
93	TraesCS2B01G503400	chr7A	83.482	448	66	7	2393	2838	692349215	692349656	2.320000e-110	411.0
94	TraesCS2B01G503400	chr7A	80.874	549	75	17	1153	1671	736527131	736526583	1.080000e-108	405.0
95	TraesCS2B01G503400	chr7A	81.385	462	81	3	6819	7280	736569675	736569219	1.090000e-98	372.0
96	TraesCS2B01G503400	chr7A	88.152	211	20	3	5844	6050	736525215	736525006	6.920000e-61	246.0
97	TraesCS2B01G503400	chr1A	78.979	1175	205	23	6810	7972	556588665	556587521	0.000000e+00	763.0
98	TraesCS2B01G503400	chr1A	90.578	329	24	5	8601	8924	569420034	569420360	6.400000e-116	429.0
99	TraesCS2B01G503400	chr1A	86.207	145	17	3	4319	4462	517639465	517639607	4.320000e-33	154.0
100	TraesCS2B01G503400	chr4A	88.386	508	26	6	8445	8926	694656536	694656036	1.670000e-161	580.0
101	TraesCS2B01G503400	chr4A	94.684	301	14	2	572	871	647387747	647388046	4.880000e-127	466.0
102	TraesCS2B01G503400	chr4A	94.371	302	14	3	571	871	658403572	658403871	2.270000e-125	460.0
103	TraesCS2B01G503400	chr4A	89.510	143	11	3	8001	8141	697304056	697303916	2.560000e-40	178.0
104	TraesCS2B01G503400	chr7B	88.270	503	27	11	8449	8926	572050245	572049750	2.800000e-159	573.0
105	TraesCS2B01G503400	chr7B	94.613	297	14	2	575	870	107281217	107281512	8.170000e-125	459.0
106	TraesCS2B01G503400	chr7B	94.020	301	16	2	571	870	107163123	107163422	1.060000e-123	455.0
107	TraesCS2B01G503400	chr7B	88.854	323	29	5	243	560	40744404	40744084	3.020000e-104	390.0
108	TraesCS2B01G503400	chr7B	83.047	407	54	6	1343	1734	743408188	743408594	1.100000e-93	355.0
109	TraesCS2B01G503400	chr7B	97.143	35	1	0	4873	4907	97365185	97365151	9.680000e-05	60.2
110	TraesCS2B01G503400	chrUn	85.535	477	48	12	8450	8924	92501264	92501721	6.270000e-131	479.0
111	TraesCS2B01G503400	chrUn	88.571	350	15	2	8450	8774	60481343	60481692	1.400000e-107	401.0
112	TraesCS2B01G503400	chrUn	93.689	206	13	0	2396	2601	340354864	340354659	8.700000e-80	309.0
113	TraesCS2B01G503400	chrUn	89.958	239	22	2	2593	2830	356988226	356988463	3.130000e-79	307.0
114	TraesCS2B01G503400	chr1B	95.638	298	11	2	574	870	648924435	648924731	2.250000e-130	477.0
115	TraesCS2B01G503400	chr1B	100.000	30	0	0	2218	2247	407771035	407771006	1.000000e-03	56.5
116	TraesCS2B01G503400	chr5A	85.270	482	47	14	8450	8924	677938746	677938282	8.110000e-130	475.0
117	TraesCS2B01G503400	chr4B	89.728	331	25	3	242	563	395182647	395182977	1.790000e-111	414.0
118	TraesCS2B01G503400	chr4B	89.124	331	26	5	239	560	347563983	347563654	3.880000e-108	403.0
119	TraesCS2B01G503400	chr4B	89.632	299	28	3	574	871	137141333	137141037	2.350000e-100	377.0
120	TraesCS2B01G503400	chr4B	97.521	121	3	0	8001	8121	467274873	467274993	3.270000e-49	207.0
121	TraesCS2B01G503400	chr4B	96.639	119	4	0	8001	8119	520425974	520425856	1.970000e-46	198.0
122	TraesCS2B01G503400	chr4B	93.548	124	8	0	7996	8119	663766089	663766212	1.530000e-42	185.0
123	TraesCS2B01G503400	chr6A	85.965	171	24	0	5875	6045	611853560	611853730	5.500000e-42	183.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2B01G503400	chr2B	697706263	697715188	8925	True	5130.666667	7391	100.000000	1	8926	3	chr2B.!!$R2	8925
1	TraesCS2B01G503400	chr2D	579756451	579761764	5313	True	1498.000000	4239	92.407000	65	8449	5	chr2D.!!$R4	8384
2	TraesCS2B01G503400	chr2D	622842003	622845858	3855	True	457.750000	907	84.039750	1107	8003	4	chr2D.!!$R5	6896
3	TraesCS2B01G503400	chr2A	717384285	717389471	5186	True	1320.200000	2242	91.509600	3	8449	5	chr2A.!!$R1	8446
4	TraesCS2B01G503400	chr2A	637698092	637699852	1760	False	1051.000000	1459	90.682000	2847	4778	2	chr2A.!!$F1	1931
5	TraesCS2B01G503400	chr4D	389193691	389194870	1179	True	1543.000000	1543	90.633000	2847	4002	1	chr4D.!!$R1	1155
6	TraesCS2B01G503400	chr3A	102492917	102494075	1158	False	1467.000000	1467	89.702000	2847	4002	1	chr3A.!!$F2	1155
7	TraesCS2B01G503400	chr3A	102437967	102439120	1153	False	1452.000000	1452	89.532000	2847	4002	1	chr3A.!!$F1	1155
8	TraesCS2B01G503400	chr3A	609822021	609823176	1155	False	1201.000000	1201	85.774000	2844	4002	1	chr3A.!!$F4	1158
9	TraesCS2B01G503400	chr7D	214106958	214108139	1181	False	1378.000000	1378	88.260000	2847	4002	1	chr7D.!!$F2	1155
10	TraesCS2B01G503400	chr7D	598742953	598743653	700	False	915.000000	915	90.237000	3293	4001	1	chr7D.!!$F4	708
11	TraesCS2B01G503400	chr7D	631846096	631850056	3960	False	482.000000	802	82.402667	1153	8004	3	chr7D.!!$F6	6851
12	TraesCS2B01G503400	chr5B	470181558	470183191	1633	False	894.000000	1352	89.175000	2846	4648	2	chr5B.!!$F2	1802
13	TraesCS2B01G503400	chr5B	436621647	436622162	515	True	773.000000	773	93.666000	4351	4869	1	chr5B.!!$R1	518
14	TraesCS2B01G503400	chr1D	329672813	329674006	1193	True	1347.000000	1347	87.718000	2846	3998	1	chr1D.!!$R2	1152
15	TraesCS2B01G503400	chr1D	464237738	464238901	1163	True	774.000000	774	78.930000	6817	8003	1	chr1D.!!$R3	1186
16	TraesCS2B01G503400	chr3B	39644458	39645653	1195	True	1282.000000	1282	86.711000	2850	4002	1	chr3B.!!$R2	1152
17	TraesCS2B01G503400	chr3B	135770850	135771427	577	False	721.000000	721	89.792000	2847	3402	1	chr3B.!!$F1	555
18	TraesCS2B01G503400	chr3B	135815835	135816414	579	False	712.000000	712	89.483000	2847	3402	1	chr3B.!!$F2	555
19	TraesCS2B01G503400	chr3B	586868425	586868930	505	False	632.000000	632	90.157000	8448	8926	1	chr3B.!!$F4	478
20	TraesCS2B01G503400	chr6B	58071823	58073806	1983	False	920.500000	1168	89.773000	2847	4869	2	chr6B.!!$F7	2022
21	TraesCS2B01G503400	chr6B	669382189	669382698	509	True	566.000000	566	87.719000	8446	8926	1	chr6B.!!$R2	480
22	TraesCS2B01G503400	chr6D	452129559	452130712	1153	True	1116.000000	1116	84.465000	2850	4002	1	chr6D.!!$R1	1152
23	TraesCS2B01G503400	chr5D	446079368	446080064	696	True	911.000000	911	90.223000	3293	4001	1	chr5D.!!$R3	708
24	TraesCS2B01G503400	chr5D	382092946	382093517	571	True	671.000000	671	88.562000	4319	4869	1	chr5D.!!$R2	550
25	TraesCS2B01G503400	chr5D	324685124	324687448	2324	False	310.000000	311	92.012500	2396	2830	2	chr5D.!!$F1	434
26	TraesCS2B01G503400	chr3D	385435302	385437151	1849	False	740.500000	817	91.315500	2847	4839	2	chr3D.!!$F2	1992
27	TraesCS2B01G503400	chr7A	728324370	728325011	641	True	676.000000	676	86.154000	242	871	1	chr7A.!!$R1	629
28	TraesCS2B01G503400	chr7A	736523230	736527131	3901	True	475.666667	776	82.859667	1153	7931	3	chr7A.!!$R3	6778
29	TraesCS2B01G503400	chr1A	556587521	556588665	1144	True	763.000000	763	78.979000	6810	7972	1	chr1A.!!$R1	1162
30	TraesCS2B01G503400	chr4A	694656036	694656536	500	True	580.000000	580	88.386000	8445	8926	1	chr4A.!!$R1	481

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
351	485	0.101759	CCAGATTCCAAGGCGCATTG	59.898	55.000	26.79	26.79	0.00	2.82	F
628	762	0.107643	TTGTGCATCGTGACCAAGGA	59.892	50.000	0.00	0.00	0.00	3.36	F
814	948	0.179056	AATGCACCGCGCCTTAGTAT	60.179	50.000	0.00	0.00	41.33	2.12	F
815	949	0.179056	ATGCACCGCGCCTTAGTATT	60.179	50.000	0.00	0.00	41.33	1.89	F
816	950	0.391927	TGCACCGCGCCTTAGTATTT	60.392	50.000	0.00	0.00	41.33	1.40	F
865	999	0.395311	TACACACCTAGAGCGGAGGG	60.395	60.000	6.55	0.00	38.52	4.30	F
1836	2096	0.813210	CTGCGATGAAGAAGAGGCCC	60.813	60.000	0.00	0.00	0.00	5.80	F
2843	5026	0.393808	ACCAAACACGCTGTCAAGGT	60.394	50.000	0.00	0.00	0.00	3.50	F
2844	5027	0.738389	CCAAACACGCTGTCAAGGTT	59.262	50.000	0.00	0.00	0.00	3.50	F
2986	5173	1.185315	ATTGGGCTGTTTGGATTCGG	58.815	50.000	0.00	0.00	0.00	4.30	F
2993	5180	2.228822	GCTGTTTGGATTCGGTTGACAT	59.771	45.455	0.00	0.00	0.00	3.06	F
4953	7547	0.602562	CGGGAAATTGCCTTGCTGAA	59.397	50.000	1.41	0.00	0.00	3.02	F
6395	9300	0.328258	AGCGGCCAAAAGGTAGTGAT	59.672	50.000	2.24	0.00	0.00	3.06	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1819	2079	0.531753	GAGGGCCTCTTCTTCATCGC	60.532	60.000	26.44	0.0	0.00	4.58	R
2614	4797	1.529865	GTTCTGTTAGTTGGCACGTCC	59.470	52.381	0.00	0.0	0.00	4.79	R
2801	4984	0.840722	GGGGAGTTGGAGACAGGGAA	60.841	60.000	0.00	0.0	44.54	3.97	R
2826	5009	2.159448	TGAAACCTTGACAGCGTGTTTG	60.159	45.455	0.00	0.0	29.89	2.93	R
2830	5013	3.354089	AAATGAAACCTTGACAGCGTG	57.646	42.857	0.00	0.0	0.00	5.34	R
2832	5015	3.914364	GCTAAAATGAAACCTTGACAGCG	59.086	43.478	0.00	0.0	0.00	5.18	R
3019	5206	1.415659	CACACCAAAATCCAGCCCAAA	59.584	47.619	0.00	0.0	0.00	3.28	R
4809	7403	1.880796	CAGTCGAACGGCACACACA	60.881	57.895	1.04	0.0	0.00	3.72	R
4869	7463	1.000717	CGCCTGGTAACCAAAACCTTG	60.001	52.381	0.00	0.0	37.91	3.61	R
4909	7503	1.269621	GCGCCGAGATGTATGGTTACT	60.270	52.381	0.00	0.0	0.00	2.24	R
5020	7620	0.536460	CCGGGCAGTTACCAAACAGT	60.536	55.000	0.00	0.0	38.12	3.55	R
6432	9367	2.226674	GGGAGCTCAAGCAACAGTTAAC	59.773	50.000	17.19	0.0	45.16	2.01	R
8093	11142	0.030369	CCTCCGTCCGGAAATACTCG	59.970	60.000	5.23	3.9	44.66	4.18	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
83	86	5.189736	ACTGTCCCTCAGATTATGTAGCAAA	59.810	40.000	1.79	0.00	46.27	3.68
213	216	1.202348	CAAGGGCCGAGGAAAAATCAC	59.798	52.381	0.00	0.00	0.00	3.06
263	267	2.558974	ACTCCCTCCTTTCCGGTTTAT	58.441	47.619	0.00	0.00	0.00	1.40
265	269	3.710165	ACTCCCTCCTTTCCGGTTTATAG	59.290	47.826	0.00	0.00	0.00	1.31
290	424	8.961634	AGGGCTTATCTTCAAATCTTAGTTTTC	58.038	33.333	0.00	0.00	0.00	2.29
321	455	2.863809	AGGCTCAATTTCGTTGTTCCT	58.136	42.857	0.00	0.00	38.95	3.36
327	461	5.356882	TCAATTTCGTTGTTCCTCATCAC	57.643	39.130	0.00	0.00	38.95	3.06
332	466	3.390135	TCGTTGTTCCTCATCACAAGTC	58.610	45.455	0.00	0.00	33.55	3.01
345	479	1.815003	CACAAGTCCAGATTCCAAGGC	59.185	52.381	0.00	0.00	0.00	4.35
351	485	0.101759	CCAGATTCCAAGGCGCATTG	59.898	55.000	26.79	26.79	0.00	2.82
352	486	0.526954	CAGATTCCAAGGCGCATTGC	60.527	55.000	28.16	14.93	45.38	3.56
372	506	8.692110	CATTGCATGCAAGTATTAAGAGAAAA	57.308	30.769	34.15	9.52	39.47	2.29
373	507	9.309516	CATTGCATGCAAGTATTAAGAGAAAAT	57.690	29.630	34.15	12.14	39.47	1.82
374	508	9.880157	ATTGCATGCAAGTATTAAGAGAAAATT	57.120	25.926	34.15	11.77	39.47	1.82
375	509	8.692110	TGCATGCAAGTATTAAGAGAAAATTG	57.308	30.769	20.30	0.00	0.00	2.32
376	510	8.522003	TGCATGCAAGTATTAAGAGAAAATTGA	58.478	29.630	20.30	0.00	0.00	2.57
377	511	8.801913	GCATGCAAGTATTAAGAGAAAATTGAC	58.198	33.333	14.21	0.00	0.00	3.18
378	512	9.294030	CATGCAAGTATTAAGAGAAAATTGACC	57.706	33.333	0.00	0.00	0.00	4.02
379	513	8.402798	TGCAAGTATTAAGAGAAAATTGACCA	57.597	30.769	0.00	0.00	0.00	4.02
380	514	8.855110	TGCAAGTATTAAGAGAAAATTGACCAA	58.145	29.630	0.00	0.00	0.00	3.67
381	515	9.860898	GCAAGTATTAAGAGAAAATTGACCAAT	57.139	29.630	0.00	0.00	0.00	3.16
383	517	9.860898	AAGTATTAAGAGAAAATTGACCAATGC	57.139	29.630	0.00	0.00	0.00	3.56
384	518	9.023962	AGTATTAAGAGAAAATTGACCAATGCA	57.976	29.630	0.00	0.00	0.00	3.96
385	519	9.807649	GTATTAAGAGAAAATTGACCAATGCAT	57.192	29.630	0.00	0.00	0.00	3.96
386	520	8.712285	ATTAAGAGAAAATTGACCAATGCATG	57.288	30.769	0.00	0.00	0.00	4.06
387	521	5.733620	AGAGAAAATTGACCAATGCATGT	57.266	34.783	0.00	0.00	0.00	3.21
388	522	6.839124	AGAGAAAATTGACCAATGCATGTA	57.161	33.333	0.00	0.00	0.00	2.29
389	523	6.624423	AGAGAAAATTGACCAATGCATGTAC	58.376	36.000	0.00	0.00	0.00	2.90
390	524	6.435277	AGAGAAAATTGACCAATGCATGTACT	59.565	34.615	0.00	0.00	0.00	2.73
391	525	6.996509	AGAAAATTGACCAATGCATGTACTT	58.003	32.000	0.00	0.00	0.00	2.24
392	526	6.869913	AGAAAATTGACCAATGCATGTACTTG	59.130	34.615	0.00	4.42	0.00	3.16
393	527	5.981088	AATTGACCAATGCATGTACTTGA	57.019	34.783	12.65	0.00	0.00	3.02
394	528	6.534475	AATTGACCAATGCATGTACTTGAT	57.466	33.333	12.65	1.36	0.00	2.57
395	529	4.968812	TGACCAATGCATGTACTTGATG	57.031	40.909	12.65	7.55	0.00	3.07
396	530	3.129113	TGACCAATGCATGTACTTGATGC	59.871	43.478	12.65	10.80	45.45	3.91
404	538	4.301637	CATGTACTTGATGCATGCATGT	57.698	40.909	36.73	28.03	43.34	3.21
405	539	5.427036	CATGTACTTGATGCATGCATGTA	57.573	39.130	36.73	27.02	43.34	2.29
406	540	6.009115	CATGTACTTGATGCATGCATGTAT	57.991	37.500	36.73	27.55	43.34	2.29
407	541	6.443792	CATGTACTTGATGCATGCATGTATT	58.556	36.000	36.73	19.81	43.34	1.89
408	542	7.586747	CATGTACTTGATGCATGCATGTATTA	58.413	34.615	36.73	22.19	43.34	0.98
409	543	6.958255	TGTACTTGATGCATGCATGTATTAC	58.042	36.000	36.73	27.17	36.70	1.89
410	544	6.541641	TGTACTTGATGCATGCATGTATTACA	59.458	34.615	36.73	28.99	36.70	2.41
411	545	6.453926	ACTTGATGCATGCATGTATTACAA	57.546	33.333	36.73	27.84	36.70	2.41
412	546	7.046292	ACTTGATGCATGCATGTATTACAAT	57.954	32.000	36.73	17.98	36.70	2.71
413	547	7.494211	ACTTGATGCATGCATGTATTACAATT	58.506	30.769	36.73	22.16	36.70	2.32
414	548	8.631797	ACTTGATGCATGCATGTATTACAATTA	58.368	29.630	36.73	11.77	36.70	1.40
415	549	9.465985	CTTGATGCATGCATGTATTACAATTAA	57.534	29.630	36.73	12.14	36.70	1.40
416	550	9.984190	TTGATGCATGCATGTATTACAATTAAT	57.016	25.926	36.73	8.56	36.70	1.40
462	596	7.727331	TGAGGAAAACAAAAGCATTAATTGG	57.273	32.000	0.00	0.00	0.00	3.16
463	597	6.709846	TGAGGAAAACAAAAGCATTAATTGGG	59.290	34.615	0.00	0.00	0.00	4.12
464	598	6.600388	AGGAAAACAAAAGCATTAATTGGGT	58.400	32.000	0.00	0.00	0.00	4.51
465	599	7.740805	AGGAAAACAAAAGCATTAATTGGGTA	58.259	30.769	0.00	0.00	0.00	3.69
466	600	7.659799	AGGAAAACAAAAGCATTAATTGGGTAC	59.340	33.333	0.00	0.00	0.00	3.34
467	601	7.659799	GGAAAACAAAAGCATTAATTGGGTACT	59.340	33.333	0.00	0.00	0.00	2.73
468	602	8.972458	AAAACAAAAGCATTAATTGGGTACTT	57.028	26.923	0.00	0.00	0.00	2.24
469	603	8.972458	AAACAAAAGCATTAATTGGGTACTTT	57.028	26.923	0.00	0.00	0.00	2.66
470	604	8.972458	AACAAAAGCATTAATTGGGTACTTTT	57.028	26.923	0.00	0.00	36.57	2.27
472	606	7.297391	CAAAAGCATTAATTGGGTACTTTTGC	58.703	34.615	15.90	0.00	42.88	3.68
473	607	5.736951	AGCATTAATTGGGTACTTTTGCA	57.263	34.783	0.00	0.00	0.00	4.08
474	608	6.107901	AGCATTAATTGGGTACTTTTGCAA	57.892	33.333	0.00	0.00	0.00	4.08
475	609	6.529220	AGCATTAATTGGGTACTTTTGCAAA	58.471	32.000	8.05	8.05	0.00	3.68
476	610	7.167535	AGCATTAATTGGGTACTTTTGCAAAT	58.832	30.769	13.65	1.10	0.00	2.32
477	611	7.665145	AGCATTAATTGGGTACTTTTGCAAATT	59.335	29.630	13.65	5.88	0.00	1.82
478	612	8.940952	GCATTAATTGGGTACTTTTGCAAATTA	58.059	29.630	13.65	4.85	0.00	1.40
481	615	9.832445	TTAATTGGGTACTTTTGCAAATTACAA	57.168	25.926	23.06	17.51	0.00	2.41
482	616	8.738645	AATTGGGTACTTTTGCAAATTACAAA	57.261	26.923	23.06	18.55	35.30	2.83
483	617	8.738645	ATTGGGTACTTTTGCAAATTACAAAA	57.261	26.923	23.06	18.32	42.93	2.44
484	618	8.561738	TTGGGTACTTTTGCAAATTACAAAAA	57.438	26.923	23.06	15.04	44.07	1.94
485	619	8.202745	TGGGTACTTTTGCAAATTACAAAAAG	57.797	30.769	23.06	14.44	44.07	2.27
486	620	7.824779	TGGGTACTTTTGCAAATTACAAAAAGT	59.175	29.630	23.06	20.06	44.07	2.66
487	621	9.315525	GGGTACTTTTGCAAATTACAAAAAGTA	57.684	29.630	23.06	17.38	44.07	2.24
494	628	7.954788	TGCAAATTACAAAAAGTATTCCACC	57.045	32.000	0.00	0.00	31.53	4.61
495	629	7.500992	TGCAAATTACAAAAAGTATTCCACCA	58.499	30.769	0.00	0.00	31.53	4.17
496	630	7.439655	TGCAAATTACAAAAAGTATTCCACCAC	59.560	33.333	0.00	0.00	31.53	4.16
497	631	7.655732	GCAAATTACAAAAAGTATTCCACCACT	59.344	33.333	0.00	0.00	31.53	4.00
498	632	9.191995	CAAATTACAAAAAGTATTCCACCACTC	57.808	33.333	0.00	0.00	31.53	3.51
499	633	8.472007	AATTACAAAAAGTATTCCACCACTCA	57.528	30.769	0.00	0.00	31.53	3.41
500	634	5.767816	ACAAAAAGTATTCCACCACTCAC	57.232	39.130	0.00	0.00	0.00	3.51
501	635	4.583073	ACAAAAAGTATTCCACCACTCACC	59.417	41.667	0.00	0.00	0.00	4.02
502	636	4.447138	AAAAGTATTCCACCACTCACCA	57.553	40.909	0.00	0.00	0.00	4.17
503	637	4.657814	AAAGTATTCCACCACTCACCAT	57.342	40.909	0.00	0.00	0.00	3.55
504	638	3.914426	AGTATTCCACCACTCACCATC	57.086	47.619	0.00	0.00	0.00	3.51
505	639	3.454858	AGTATTCCACCACTCACCATCT	58.545	45.455	0.00	0.00	0.00	2.90
506	640	4.620723	AGTATTCCACCACTCACCATCTA	58.379	43.478	0.00	0.00	0.00	1.98
507	641	5.219739	AGTATTCCACCACTCACCATCTAT	58.780	41.667	0.00	0.00	0.00	1.98
508	642	4.696479	ATTCCACCACTCACCATCTATC	57.304	45.455	0.00	0.00	0.00	2.08
509	643	3.404869	TCCACCACTCACCATCTATCT	57.595	47.619	0.00	0.00	0.00	1.98
510	644	3.724478	TCCACCACTCACCATCTATCTT	58.276	45.455	0.00	0.00	0.00	2.40
511	645	3.452264	TCCACCACTCACCATCTATCTTG	59.548	47.826	0.00	0.00	0.00	3.02
512	646	3.432749	CCACCACTCACCATCTATCTTGG	60.433	52.174	0.00	0.00	40.26	3.61
514	648	3.846588	ACCACTCACCATCTATCTTGGTT	59.153	43.478	0.00	0.00	45.19	3.67
515	649	4.289672	ACCACTCACCATCTATCTTGGTTT	59.710	41.667	0.00	0.00	45.19	3.27
516	650	4.637534	CCACTCACCATCTATCTTGGTTTG	59.362	45.833	0.00	0.00	45.19	2.93
517	651	5.248640	CACTCACCATCTATCTTGGTTTGT	58.751	41.667	0.00	0.00	45.19	2.83
518	652	5.122869	CACTCACCATCTATCTTGGTTTGTG	59.877	44.000	9.22	9.22	45.19	3.33
519	653	5.013079	ACTCACCATCTATCTTGGTTTGTGA	59.987	40.000	0.00	0.00	45.19	3.58
520	654	5.491070	TCACCATCTATCTTGGTTTGTGAG	58.509	41.667	0.00	0.00	45.19	3.51
521	655	5.248248	TCACCATCTATCTTGGTTTGTGAGA	59.752	40.000	0.00	0.00	45.19	3.27
522	656	6.070021	TCACCATCTATCTTGGTTTGTGAGAT	60.070	38.462	0.00	0.00	45.19	2.75
523	657	6.600822	CACCATCTATCTTGGTTTGTGAGATT	59.399	38.462	0.00	0.00	45.19	2.40
524	658	7.121759	CACCATCTATCTTGGTTTGTGAGATTT	59.878	37.037	0.00	0.00	45.19	2.17
525	659	7.671398	ACCATCTATCTTGGTTTGTGAGATTTT	59.329	33.333	0.00	0.00	45.19	1.82
526	660	8.526147	CCATCTATCTTGGTTTGTGAGATTTTT	58.474	33.333	0.00	0.00	32.68	1.94
527	661	9.350357	CATCTATCTTGGTTTGTGAGATTTTTG	57.650	33.333	0.00	0.00	32.68	2.44
528	662	8.690203	TCTATCTTGGTTTGTGAGATTTTTGA	57.310	30.769	0.00	0.00	32.68	2.69
529	663	9.130661	TCTATCTTGGTTTGTGAGATTTTTGAA	57.869	29.630	0.00	0.00	32.68	2.69
530	664	9.918630	CTATCTTGGTTTGTGAGATTTTTGAAT	57.081	29.630	0.00	0.00	32.68	2.57
532	666	8.422973	TCTTGGTTTGTGAGATTTTTGAATTG	57.577	30.769	0.00	0.00	0.00	2.32
533	667	8.256605	TCTTGGTTTGTGAGATTTTTGAATTGA	58.743	29.630	0.00	0.00	0.00	2.57
534	668	8.783833	TTGGTTTGTGAGATTTTTGAATTGAA	57.216	26.923	0.00	0.00	0.00	2.69
535	669	8.195617	TGGTTTGTGAGATTTTTGAATTGAAC	57.804	30.769	0.00	0.00	0.00	3.18
536	670	8.040132	TGGTTTGTGAGATTTTTGAATTGAACT	58.960	29.630	0.00	0.00	0.00	3.01
537	671	8.882736	GGTTTGTGAGATTTTTGAATTGAACTT	58.117	29.630	0.00	0.00	0.00	2.66
538	672	9.693157	GTTTGTGAGATTTTTGAATTGAACTTG	57.307	29.630	0.00	0.00	0.00	3.16
539	673	9.434420	TTTGTGAGATTTTTGAATTGAACTTGT	57.566	25.926	0.00	0.00	0.00	3.16
545	679	9.030301	AGATTTTTGAATTGAACTTGTAAACCG	57.970	29.630	0.00	0.00	0.00	4.44
546	680	7.527084	TTTTTGAATTGAACTTGTAAACCGG	57.473	32.000	0.00	0.00	0.00	5.28
547	681	6.452494	TTTGAATTGAACTTGTAAACCGGA	57.548	33.333	9.46	0.00	0.00	5.14
548	682	6.452494	TTGAATTGAACTTGTAAACCGGAA	57.548	33.333	9.46	0.00	0.00	4.30
549	683	6.452494	TGAATTGAACTTGTAAACCGGAAA	57.548	33.333	9.46	0.00	0.00	3.13
550	684	6.500041	TGAATTGAACTTGTAAACCGGAAAG	58.500	36.000	9.46	6.26	0.00	2.62
552	686	4.153673	TGAACTTGTAAACCGGAAAGGA	57.846	40.909	9.46	0.00	45.00	3.36
553	687	4.131596	TGAACTTGTAAACCGGAAAGGAG	58.868	43.478	9.46	0.83	45.00	3.69
554	688	3.136009	ACTTGTAAACCGGAAAGGAGG	57.864	47.619	9.46	0.00	45.00	4.30
555	689	2.224695	ACTTGTAAACCGGAAAGGAGGG	60.225	50.000	9.46	0.00	45.00	4.30
556	690	1.732117	TGTAAACCGGAAAGGAGGGA	58.268	50.000	9.46	0.00	45.00	4.20
557	691	1.626825	TGTAAACCGGAAAGGAGGGAG	59.373	52.381	9.46	0.00	45.00	4.30
558	692	1.627329	GTAAACCGGAAAGGAGGGAGT	59.373	52.381	9.46	0.00	45.00	3.85
559	693	2.034436	AAACCGGAAAGGAGGGAGTA	57.966	50.000	9.46	0.00	45.00	2.59
560	694	1.569653	AACCGGAAAGGAGGGAGTAG	58.430	55.000	9.46	0.00	45.00	2.57
561	695	0.412640	ACCGGAAAGGAGGGAGTAGT	59.587	55.000	9.46	0.00	45.00	2.73
562	696	1.642762	ACCGGAAAGGAGGGAGTAGTA	59.357	52.381	9.46	0.00	45.00	1.82
563	697	2.030371	CCGGAAAGGAGGGAGTAGTAC	58.970	57.143	0.00	0.00	45.00	2.73
564	698	1.674962	CGGAAAGGAGGGAGTAGTACG	59.325	57.143	0.00	0.00	0.00	3.67
565	699	2.732763	GGAAAGGAGGGAGTAGTACGT	58.267	52.381	0.00	0.00	0.00	3.57
566	700	3.682718	CGGAAAGGAGGGAGTAGTACGTA	60.683	52.174	0.00	0.00	0.00	3.57
567	701	4.468713	GGAAAGGAGGGAGTAGTACGTAT	58.531	47.826	0.00	0.00	0.00	3.06
568	702	4.892345	GGAAAGGAGGGAGTAGTACGTATT	59.108	45.833	0.00	0.00	0.00	1.89
569	703	5.009510	GGAAAGGAGGGAGTAGTACGTATTC	59.990	48.000	0.00	0.00	0.00	1.75
570	704	4.785346	AGGAGGGAGTAGTACGTATTCA	57.215	45.455	0.00	0.00	0.00	2.57
571	705	5.321934	AGGAGGGAGTAGTACGTATTCAT	57.678	43.478	0.00	0.00	0.00	2.57
572	706	5.315348	AGGAGGGAGTAGTACGTATTCATC	58.685	45.833	0.00	0.00	0.00	2.92
573	707	4.153835	GGAGGGAGTAGTACGTATTCATCG	59.846	50.000	0.00	0.00	0.00	3.84
574	708	4.712476	AGGGAGTAGTACGTATTCATCGT	58.288	43.478	0.00	0.00	43.86	3.73
575	709	5.858381	AGGGAGTAGTACGTATTCATCGTA	58.142	41.667	0.00	0.00	41.72	3.43
583	717	2.883386	ACGTATTCATCGTACTCCCTCC	59.117	50.000	0.00	0.00	39.78	4.30
584	718	2.095869	CGTATTCATCGTACTCCCTCCG	60.096	54.545	0.00	0.00	0.00	4.63
585	719	2.068834	ATTCATCGTACTCCCTCCGT	57.931	50.000	0.00	0.00	0.00	4.69
586	720	1.386533	TTCATCGTACTCCCTCCGTC	58.613	55.000	0.00	0.00	0.00	4.79
587	721	0.545171	TCATCGTACTCCCTCCGTCT	59.455	55.000	0.00	0.00	0.00	4.18
588	722	1.764723	TCATCGTACTCCCTCCGTCTA	59.235	52.381	0.00	0.00	0.00	2.59
589	723	2.144730	CATCGTACTCCCTCCGTCTAG	58.855	57.143	0.00	0.00	0.00	2.43
590	724	0.467384	TCGTACTCCCTCCGTCTAGG	59.533	60.000	0.00	0.00	42.97	3.02
591	725	0.179936	CGTACTCCCTCCGTCTAGGT	59.820	60.000	0.00	0.00	41.99	3.08
592	726	1.677942	GTACTCCCTCCGTCTAGGTG	58.322	60.000	0.00	0.00	41.99	4.00
593	727	1.211457	GTACTCCCTCCGTCTAGGTGA	59.789	57.143	0.00	0.00	41.99	4.02
594	728	0.256464	ACTCCCTCCGTCTAGGTGAG	59.744	60.000	0.00	0.00	41.99	3.51
595	729	0.256464	CTCCCTCCGTCTAGGTGAGT	59.744	60.000	0.00	0.00	41.99	3.41
596	730	1.489649	CTCCCTCCGTCTAGGTGAGTA	59.510	57.143	0.00	0.00	41.99	2.59
597	731	1.918262	TCCCTCCGTCTAGGTGAGTAA	59.082	52.381	0.00	0.00	41.99	2.24
598	732	2.092538	TCCCTCCGTCTAGGTGAGTAAG	60.093	54.545	0.00	0.00	41.99	2.34
599	733	2.356947	CCCTCCGTCTAGGTGAGTAAGT	60.357	54.545	0.00	0.00	41.99	2.24
600	734	2.944349	CCTCCGTCTAGGTGAGTAAGTC	59.056	54.545	0.00	0.00	41.99	3.01
601	735	3.607741	CTCCGTCTAGGTGAGTAAGTCA	58.392	50.000	0.00	0.00	41.99	3.41
602	736	4.200874	CTCCGTCTAGGTGAGTAAGTCAT	58.799	47.826	0.00	0.00	41.99	3.06
603	737	4.197750	TCCGTCTAGGTGAGTAAGTCATC	58.802	47.826	0.00	0.00	41.99	2.92
605	739	4.641094	CCGTCTAGGTGAGTAAGTCATCTT	59.359	45.833	0.00	0.00	45.09	2.40
606	740	5.821470	CCGTCTAGGTGAGTAAGTCATCTTA	59.179	44.000	0.00	0.00	45.09	2.10
607	741	6.017770	CCGTCTAGGTGAGTAAGTCATCTTAG	60.018	46.154	0.00	0.00	45.09	2.18
608	742	6.017770	CGTCTAGGTGAGTAAGTCATCTTAGG	60.018	46.154	0.00	0.00	45.09	2.69
609	743	6.829811	GTCTAGGTGAGTAAGTCATCTTAGGT	59.170	42.308	0.00	0.00	45.09	3.08
610	744	7.339976	GTCTAGGTGAGTAAGTCATCTTAGGTT	59.660	40.741	0.00	0.00	45.09	3.50
611	745	6.287589	AGGTGAGTAAGTCATCTTAGGTTG	57.712	41.667	0.00	0.00	45.09	3.77
612	746	5.780793	AGGTGAGTAAGTCATCTTAGGTTGT	59.219	40.000	0.00	0.00	45.09	3.32
613	747	5.869888	GGTGAGTAAGTCATCTTAGGTTGTG	59.130	44.000	0.00	0.00	37.56	3.33
614	748	5.348997	GTGAGTAAGTCATCTTAGGTTGTGC	59.651	44.000	0.00	0.00	37.56	4.57
615	749	5.011635	TGAGTAAGTCATCTTAGGTTGTGCA	59.988	40.000	0.00	0.00	36.90	4.57
616	750	6.054860	AGTAAGTCATCTTAGGTTGTGCAT	57.945	37.500	0.00	0.00	36.90	3.96
617	751	6.109359	AGTAAGTCATCTTAGGTTGTGCATC	58.891	40.000	0.00	0.00	36.90	3.91
618	752	3.525537	AGTCATCTTAGGTTGTGCATCG	58.474	45.455	0.00	0.00	0.00	3.84
619	753	3.055819	AGTCATCTTAGGTTGTGCATCGT	60.056	43.478	0.00	0.00	0.00	3.73
620	754	3.062639	GTCATCTTAGGTTGTGCATCGTG	59.937	47.826	0.00	0.00	0.00	4.35
621	755	3.056179	TCATCTTAGGTTGTGCATCGTGA	60.056	43.478	0.00	0.00	0.00	4.35
622	756	2.683968	TCTTAGGTTGTGCATCGTGAC	58.316	47.619	0.00	0.00	0.00	3.67
623	757	1.732259	CTTAGGTTGTGCATCGTGACC	59.268	52.381	0.00	0.00	0.00	4.02
624	758	0.682292	TAGGTTGTGCATCGTGACCA	59.318	50.000	0.00	0.00	32.81	4.02
625	759	0.179032	AGGTTGTGCATCGTGACCAA	60.179	50.000	0.00	0.00	32.81	3.67
626	760	0.238289	GGTTGTGCATCGTGACCAAG	59.762	55.000	0.00	0.00	0.00	3.61
627	761	0.238289	GTTGTGCATCGTGACCAAGG	59.762	55.000	0.00	0.00	0.00	3.61
628	762	0.107643	TTGTGCATCGTGACCAAGGA	59.892	50.000	0.00	0.00	0.00	3.36
629	763	0.320683	TGTGCATCGTGACCAAGGAG	60.321	55.000	0.00	0.00	0.00	3.69
630	764	1.021390	GTGCATCGTGACCAAGGAGG	61.021	60.000	0.00	0.00	45.67	4.30
631	765	1.191489	TGCATCGTGACCAAGGAGGA	61.191	55.000	0.00	0.00	41.22	3.71
632	766	0.460987	GCATCGTGACCAAGGAGGAG	60.461	60.000	0.00	0.00	41.22	3.69
633	767	1.186200	CATCGTGACCAAGGAGGAGA	58.814	55.000	0.00	0.00	41.22	3.71
634	768	1.135915	CATCGTGACCAAGGAGGAGAG	59.864	57.143	0.00	0.00	41.22	3.20
635	769	0.612174	TCGTGACCAAGGAGGAGAGG	60.612	60.000	0.00	0.00	41.22	3.69
636	770	0.612174	CGTGACCAAGGAGGAGAGGA	60.612	60.000	0.00	0.00	41.22	3.71
637	771	1.645710	GTGACCAAGGAGGAGAGGAA	58.354	55.000	0.00	0.00	41.22	3.36
638	772	1.978580	GTGACCAAGGAGGAGAGGAAA	59.021	52.381	0.00	0.00	41.22	3.13
639	773	2.372172	GTGACCAAGGAGGAGAGGAAAA	59.628	50.000	0.00	0.00	41.22	2.29
640	774	2.372172	TGACCAAGGAGGAGAGGAAAAC	59.628	50.000	0.00	0.00	41.22	2.43
641	775	2.372172	GACCAAGGAGGAGAGGAAAACA	59.628	50.000	0.00	0.00	41.22	2.83
642	776	2.783510	ACCAAGGAGGAGAGGAAAACAA	59.216	45.455	0.00	0.00	41.22	2.83
643	777	3.181439	ACCAAGGAGGAGAGGAAAACAAG	60.181	47.826	0.00	0.00	41.22	3.16
644	778	3.073062	CCAAGGAGGAGAGGAAAACAAGA	59.927	47.826	0.00	0.00	41.22	3.02
645	779	4.322567	CAAGGAGGAGAGGAAAACAAGAG	58.677	47.826	0.00	0.00	0.00	2.85
646	780	2.909662	AGGAGGAGAGGAAAACAAGAGG	59.090	50.000	0.00	0.00	0.00	3.69
647	781	2.616765	GGAGGAGAGGAAAACAAGAGGC	60.617	54.545	0.00	0.00	0.00	4.70
648	782	2.039084	GAGGAGAGGAAAACAAGAGGCA	59.961	50.000	0.00	0.00	0.00	4.75
649	783	2.646798	AGGAGAGGAAAACAAGAGGCAT	59.353	45.455	0.00	0.00	0.00	4.40
650	784	3.075134	AGGAGAGGAAAACAAGAGGCATT	59.925	43.478	0.00	0.00	0.00	3.56
651	785	4.289672	AGGAGAGGAAAACAAGAGGCATTA	59.710	41.667	0.00	0.00	0.00	1.90
656	790	6.494835	AGAGGAAAACAAGAGGCATTAATGTT	59.505	34.615	16.61	5.88	35.86	2.71
657	791	7.015584	AGAGGAAAACAAGAGGCATTAATGTTT	59.984	33.333	16.61	6.33	43.78	2.83
659	793	8.815912	AGGAAAACAAGAGGCATTAATGTTTAT	58.184	29.630	16.61	0.54	41.79	1.40
664	798	7.614494	ACAAGAGGCATTAATGTTTATTTGCT	58.386	30.769	16.61	1.70	32.91	3.91
700	834	3.855689	ATGCAATGAACTAACCACTGC	57.144	42.857	0.00	0.00	0.00	4.40
701	835	2.580962	TGCAATGAACTAACCACTGCA	58.419	42.857	0.00	0.00	36.06	4.41
703	837	3.573538	TGCAATGAACTAACCACTGCATT	59.426	39.130	0.00	0.00	33.65	3.56
704	838	4.168760	GCAATGAACTAACCACTGCATTC	58.831	43.478	0.00	0.00	0.00	2.67
705	839	4.406069	CAATGAACTAACCACTGCATTCG	58.594	43.478	0.00	0.00	0.00	3.34
706	840	3.120321	TGAACTAACCACTGCATTCGT	57.880	42.857	0.00	0.00	0.00	3.85
707	841	2.805671	TGAACTAACCACTGCATTCGTG	59.194	45.455	0.00	0.00	0.00	4.35
709	843	2.846193	ACTAACCACTGCATTCGTGTT	58.154	42.857	4.13	2.15	0.00	3.32
711	845	2.490328	AACCACTGCATTCGTGTTTG	57.510	45.000	4.13	0.00	0.00	2.93
712	846	1.674359	ACCACTGCATTCGTGTTTGA	58.326	45.000	4.13	0.00	0.00	2.69
713	847	2.229792	ACCACTGCATTCGTGTTTGAT	58.770	42.857	4.13	0.00	0.00	2.57
714	848	3.407698	ACCACTGCATTCGTGTTTGATA	58.592	40.909	4.13	0.00	0.00	2.15
715	849	3.436704	ACCACTGCATTCGTGTTTGATAG	59.563	43.478	4.13	0.00	0.00	2.08
717	851	4.436050	CCACTGCATTCGTGTTTGATAGTC	60.436	45.833	4.13	0.00	0.00	2.59
719	853	4.627467	ACTGCATTCGTGTTTGATAGTCTC	59.373	41.667	0.00	0.00	0.00	3.36
721	855	4.994217	TGCATTCGTGTTTGATAGTCTCAA	59.006	37.500	0.00	0.00	42.15	3.02
722	856	5.120674	TGCATTCGTGTTTGATAGTCTCAAG	59.879	40.000	0.00	0.00	44.48	3.02
723	857	5.120830	GCATTCGTGTTTGATAGTCTCAAGT	59.879	40.000	0.00	0.00	44.48	3.16
724	858	6.670927	GCATTCGTGTTTGATAGTCTCAAGTC	60.671	42.308	0.00	0.00	44.48	3.01
726	860	6.025749	TCGTGTTTGATAGTCTCAAGTCAT	57.974	37.500	0.00	0.00	44.48	3.06
727	861	6.455647	TCGTGTTTGATAGTCTCAAGTCATT	58.544	36.000	0.00	0.00	44.48	2.57
728	862	7.599171	TCGTGTTTGATAGTCTCAAGTCATTA	58.401	34.615	0.00	0.00	44.48	1.90
730	864	8.708742	CGTGTTTGATAGTCTCAAGTCATTAAA	58.291	33.333	0.00	0.00	44.48	1.52
733	867	9.548208	GTTTGATAGTCTCAAGTCATTAAAAGC	57.452	33.333	0.00	0.00	44.48	3.51
734	868	8.846943	TTGATAGTCTCAAGTCATTAAAAGCA	57.153	30.769	0.00	0.00	38.97	3.91
735	869	9.453572	TTGATAGTCTCAAGTCATTAAAAGCAT	57.546	29.630	0.00	0.00	38.97	3.79
736	870	8.886719	TGATAGTCTCAAGTCATTAAAAGCATG	58.113	33.333	0.00	0.00	0.00	4.06
737	871	5.947443	AGTCTCAAGTCATTAAAAGCATGC	58.053	37.500	10.51	10.51	0.00	4.06
738	872	5.474532	AGTCTCAAGTCATTAAAAGCATGCA	59.525	36.000	21.98	0.00	0.00	3.96
739	873	5.570589	GTCTCAAGTCATTAAAAGCATGCAC	59.429	40.000	21.98	6.43	0.00	4.57
740	874	5.241285	TCTCAAGTCATTAAAAGCATGCACA	59.759	36.000	21.98	0.00	0.00	4.57
741	875	5.221880	TCAAGTCATTAAAAGCATGCACAC	58.778	37.500	21.98	4.04	0.00	3.82
742	876	4.178545	AGTCATTAAAAGCATGCACACC	57.821	40.909	21.98	0.00	0.00	4.16
744	878	2.233431	TCATTAAAAGCATGCACACCCC	59.767	45.455	21.98	0.00	0.00	4.95
745	879	2.008242	TTAAAAGCATGCACACCCCT	57.992	45.000	21.98	0.00	0.00	4.79
747	881	0.393820	AAAAGCATGCACACCCCTTG	59.606	50.000	21.98	0.00	0.00	3.61
748	882	0.760189	AAAGCATGCACACCCCTTGT	60.760	50.000	21.98	0.00	39.97	3.16
749	883	1.181098	AAGCATGCACACCCCTTGTC	61.181	55.000	21.98	0.00	35.67	3.18
750	884	1.604593	GCATGCACACCCCTTGTCT	60.605	57.895	14.21	0.00	35.67	3.41
751	885	1.589716	GCATGCACACCCCTTGTCTC	61.590	60.000	14.21	0.00	35.67	3.36
753	887	0.773644	ATGCACACCCCTTGTCTCTT	59.226	50.000	0.00	0.00	35.67	2.85
756	890	2.375174	TGCACACCCCTTGTCTCTTATT	59.625	45.455	0.00	0.00	35.67	1.40
757	891	2.749621	GCACACCCCTTGTCTCTTATTG	59.250	50.000	0.00	0.00	35.67	1.90
758	892	3.347216	CACACCCCTTGTCTCTTATTGG	58.653	50.000	0.00	0.00	35.67	3.16
759	893	2.986728	ACACCCCTTGTCTCTTATTGGT	59.013	45.455	0.00	0.00	29.79	3.67
760	894	3.397955	ACACCCCTTGTCTCTTATTGGTT	59.602	43.478	0.00	0.00	29.79	3.67
761	895	3.758554	CACCCCTTGTCTCTTATTGGTTG	59.241	47.826	0.00	0.00	0.00	3.77
762	896	3.655777	ACCCCTTGTCTCTTATTGGTTGA	59.344	43.478	0.00	0.00	0.00	3.18
767	901	7.056635	CCCTTGTCTCTTATTGGTTGATATGT	58.943	38.462	0.00	0.00	0.00	2.29
768	902	7.012704	CCCTTGTCTCTTATTGGTTGATATGTG	59.987	40.741	0.00	0.00	0.00	3.21
769	903	7.770433	CCTTGTCTCTTATTGGTTGATATGTGA	59.230	37.037	0.00	0.00	0.00	3.58
770	904	9.166173	CTTGTCTCTTATTGGTTGATATGTGAA	57.834	33.333	0.00	0.00	0.00	3.18
771	905	8.722480	TGTCTCTTATTGGTTGATATGTGAAG	57.278	34.615	0.00	0.00	0.00	3.02
772	906	8.539544	TGTCTCTTATTGGTTGATATGTGAAGA	58.460	33.333	0.00	0.00	0.00	2.87
773	907	9.383519	GTCTCTTATTGGTTGATATGTGAAGAA	57.616	33.333	0.00	0.00	0.00	2.52
776	910	9.513906	TCTTATTGGTTGATATGTGAAGAAACA	57.486	29.630	0.00	0.00	0.00	2.83
780	914	9.829507	ATTGGTTGATATGTGAAGAAACAAAAA	57.170	25.926	0.00	0.00	32.81	1.94
803	937	8.687824	AAAATGAGATAAAAGTTAATGCACCG	57.312	30.769	0.00	0.00	0.00	4.94
804	938	5.229921	TGAGATAAAAGTTAATGCACCGC	57.770	39.130	0.00	0.00	0.00	5.68
805	939	4.201773	TGAGATAAAAGTTAATGCACCGCG	60.202	41.667	0.00	0.00	0.00	6.46
806	940	2.250348	TAAAAGTTAATGCACCGCGC	57.750	45.000	0.00	0.00	42.89	6.86
807	941	0.388006	AAAAGTTAATGCACCGCGCC	60.388	50.000	0.00	0.00	41.33	6.53
808	942	1.241315	AAAGTTAATGCACCGCGCCT	61.241	50.000	0.00	0.00	41.33	5.52
809	943	1.241315	AAGTTAATGCACCGCGCCTT	61.241	50.000	0.00	0.00	41.33	4.35
810	944	0.391927	AGTTAATGCACCGCGCCTTA	60.392	50.000	0.00	0.00	41.33	2.69
812	946	0.391927	TTAATGCACCGCGCCTTAGT	60.392	50.000	0.00	0.00	41.33	2.24
814	948	0.179056	AATGCACCGCGCCTTAGTAT	60.179	50.000	0.00	0.00	41.33	2.12
815	949	0.179056	ATGCACCGCGCCTTAGTATT	60.179	50.000	0.00	0.00	41.33	1.89
816	950	0.391927	TGCACCGCGCCTTAGTATTT	60.392	50.000	0.00	0.00	41.33	1.40
817	951	0.730840	GCACCGCGCCTTAGTATTTT	59.269	50.000	0.00	0.00	32.94	1.82
820	954	1.735571	ACCGCGCCTTAGTATTTTGTG	59.264	47.619	0.00	0.00	0.00	3.33
821	955	2.004017	CCGCGCCTTAGTATTTTGTGA	58.996	47.619	0.00	0.00	0.00	3.58
822	956	2.612212	CCGCGCCTTAGTATTTTGTGAT	59.388	45.455	0.00	0.00	0.00	3.06
823	957	3.064820	CCGCGCCTTAGTATTTTGTGATT	59.935	43.478	0.00	0.00	0.00	2.57
824	958	4.271533	CCGCGCCTTAGTATTTTGTGATTA	59.728	41.667	0.00	0.00	0.00	1.75
825	959	5.049680	CCGCGCCTTAGTATTTTGTGATTAT	60.050	40.000	0.00	0.00	0.00	1.28
826	960	6.427150	CGCGCCTTAGTATTTTGTGATTATT	58.573	36.000	0.00	0.00	0.00	1.40
827	961	6.910433	CGCGCCTTAGTATTTTGTGATTATTT	59.090	34.615	0.00	0.00	0.00	1.40
828	962	7.097047	CGCGCCTTAGTATTTTGTGATTATTTG	60.097	37.037	0.00	0.00	0.00	2.32
829	963	7.167468	GCGCCTTAGTATTTTGTGATTATTTGG	59.833	37.037	0.00	0.00	0.00	3.28
830	964	8.188139	CGCCTTAGTATTTTGTGATTATTTGGT	58.812	33.333	0.00	0.00	0.00	3.67
836	970	9.974980	AGTATTTTGTGATTATTTGGTTTTCGT	57.025	25.926	0.00	0.00	0.00	3.85
859	993	4.993029	AGATGACTTACACACCTAGAGC	57.007	45.455	0.00	0.00	0.00	4.09
860	994	3.378742	AGATGACTTACACACCTAGAGCG	59.621	47.826	0.00	0.00	0.00	5.03
861	995	1.816835	TGACTTACACACCTAGAGCGG	59.183	52.381	0.00	0.00	0.00	5.52
862	996	2.089980	GACTTACACACCTAGAGCGGA	58.910	52.381	0.00	0.00	0.00	5.54
863	997	2.093106	ACTTACACACCTAGAGCGGAG	58.907	52.381	0.00	0.00	0.00	4.63
864	998	1.405821	CTTACACACCTAGAGCGGAGG	59.594	57.143	0.00	0.54	40.22	4.30
865	999	0.395311	TACACACCTAGAGCGGAGGG	60.395	60.000	6.55	0.00	38.52	4.30
866	1000	1.379977	CACACCTAGAGCGGAGGGA	60.380	63.158	6.55	0.00	38.52	4.20
867	1001	1.076632	ACACCTAGAGCGGAGGGAG	60.077	63.158	6.55	1.93	38.52	4.30
903	1037	2.886523	TCAAGAAGGTCAACTTGCATGG	59.113	45.455	4.44	0.00	41.91	3.66
971	1107	7.683437	TGAATACGTCTCTCTCTTAACTTCA	57.317	36.000	0.00	0.00	0.00	3.02
972	1108	8.107399	TGAATACGTCTCTCTCTTAACTTCAA	57.893	34.615	0.00	0.00	0.00	2.69
1466	1650	3.315949	GGGCAGGTACACGTGGGA	61.316	66.667	21.57	4.16	32.80	4.37
1467	1651	2.264794	GGCAGGTACACGTGGGAG	59.735	66.667	21.57	5.96	32.80	4.30
1653	1840	4.658786	AGGGGGCTCAAGGACGGT	62.659	66.667	0.00	0.00	0.00	4.83
1674	1861	3.395630	GGCACCTTCTACCCCGAA	58.604	61.111	0.00	0.00	0.00	4.30
1743	1962	1.004440	GCTGCCTGACGTCTCCTTT	60.004	57.895	17.92	0.00	0.00	3.11
1836	2096	0.813210	CTGCGATGAAGAAGAGGCCC	60.813	60.000	0.00	0.00	0.00	5.80
1956	2231	0.900647	ACACGGCTGGTTCTAGCTCT	60.901	55.000	7.97	0.00	43.22	4.09
2172	2447	4.762251	GGAATCAGGTAATGCATAACTCCC	59.238	45.833	0.00	0.00	25.09	4.30
2216	2491	6.603237	TGTCGCTCAACTAATTCCATAATG	57.397	37.500	0.00	0.00	0.00	1.90
2217	2492	5.007626	TGTCGCTCAACTAATTCCATAATGC	59.992	40.000	0.00	0.00	0.00	3.56
2220	2495	6.646653	TCGCTCAACTAATTCCATAATGCTAG	59.353	38.462	0.00	0.00	0.00	3.42
2242	2517	4.943705	AGATACATCCGTTTGAGCAACAAT	59.056	37.500	0.00	0.00	38.36	2.71
2250	2525	6.378582	TCCGTTTGAGCAACAATTAATTCTC	58.621	36.000	0.00	2.98	38.36	2.87
2254	2529	7.379529	CGTTTGAGCAACAATTAATTCTCAACT	59.620	33.333	20.98	7.79	39.40	3.16
2256	2531	7.509141	TGAGCAACAATTAATTCTCAACTGA	57.491	32.000	12.51	0.00	0.00	3.41
2259	2534	6.071728	AGCAACAATTAATTCTCAACTGAGGG	60.072	38.462	6.87	0.00	42.30	4.30
2265	2550	8.964772	CAATTAATTCTCAACTGAGGGAATCTT	58.035	33.333	6.87	0.00	42.30	2.40
2284	2569	9.196552	GGAATCTTAATTTTCAACAGTTTCCTG	57.803	33.333	0.00	0.00	44.68	3.86
2285	2570	9.965824	GAATCTTAATTTTCAACAGTTTCCTGA	57.034	29.630	0.00	0.00	41.50	3.86
2293	2578	7.672983	TTTCAACAGTTTCCTGATCTACATC	57.327	36.000	0.00	0.00	41.50	3.06
2310	2595	2.167281	ACATCGCTGTGAGCTATGAAGT	59.833	45.455	14.90	0.00	44.36	3.01
2358	2647	7.555195	TCCTTTATCGACATGAGAGTGTTACTA	59.445	37.037	0.00	0.00	31.16	1.82
2379	2671	7.259088	ACTATCTTCTAAGGTTGAATGTGGT	57.741	36.000	0.00	0.00	0.00	4.16
2442	2734	3.463704	GAGGGAATGGGAGTTTAGGGATT	59.536	47.826	0.00	0.00	0.00	3.01
2443	2735	3.864770	AGGGAATGGGAGTTTAGGGATTT	59.135	43.478	0.00	0.00	0.00	2.17
2444	2736	3.960755	GGGAATGGGAGTTTAGGGATTTG	59.039	47.826	0.00	0.00	0.00	2.32
2452	2744	5.538813	GGGAGTTTAGGGATTTGAGTTTGTT	59.461	40.000	0.00	0.00	0.00	2.83
2454	2746	7.231925	GGGAGTTTAGGGATTTGAGTTTGTTAA	59.768	37.037	0.00	0.00	0.00	2.01
2455	2747	8.635328	GGAGTTTAGGGATTTGAGTTTGTTAAA	58.365	33.333	0.00	0.00	0.00	1.52
2469	2761	7.393234	TGAGTTTGTTAAAGGATTAGACATGGG	59.607	37.037	0.00	0.00	0.00	4.00
2480	2772	8.015185	AGGATTAGACATGGGAAATTGATTTG	57.985	34.615	0.00	0.00	0.00	2.32
2486	2778	5.713025	ACATGGGAAATTGATTTGAACTCG	58.287	37.500	0.00	0.00	0.00	4.18
2525	2817	5.394115	GCATGTGAAGGTAATTTAAGGTGGG	60.394	44.000	0.00	0.00	0.00	4.61
2532	2824	9.250246	TGAAGGTAATTTAAGGTGGGAATTTAG	57.750	33.333	0.00	0.00	0.00	1.85
2533	2825	9.470399	GAAGGTAATTTAAGGTGGGAATTTAGA	57.530	33.333	0.00	0.00	0.00	2.10
2614	4797	1.078918	TGCAATGCCTCTCCTCACG	60.079	57.895	1.53	0.00	0.00	4.35
2633	4816	1.870580	CGGACGTGCCAACTAACAGAA	60.871	52.381	0.00	0.00	35.94	3.02
2635	4818	1.191647	GACGTGCCAACTAACAGAACG	59.808	52.381	0.00	0.00	35.78	3.95
2674	4857	7.272244	CAATTCCCAATCCCCAGTTAAATTAC	58.728	38.462	0.00	0.00	0.00	1.89
2675	4858	4.874199	TCCCAATCCCCAGTTAAATTACC	58.126	43.478	0.00	0.00	0.00	2.85
2676	4859	4.295238	TCCCAATCCCCAGTTAAATTACCA	59.705	41.667	0.00	0.00	0.00	3.25
2677	4860	4.649218	CCCAATCCCCAGTTAAATTACCAG	59.351	45.833	0.00	0.00	0.00	4.00
2678	4861	4.649218	CCAATCCCCAGTTAAATTACCAGG	59.351	45.833	0.00	0.00	0.00	4.45
2679	4862	4.536295	ATCCCCAGTTAAATTACCAGGG	57.464	45.455	0.00	0.00	34.99	4.45
2680	4863	3.026707	CCCCAGTTAAATTACCAGGGG	57.973	52.381	2.80	2.80	43.51	4.79
2681	4864	2.313643	CCCCAGTTAAATTACCAGGGGT	59.686	50.000	8.61	0.00	43.78	4.95
2700	4883	1.204146	TCCCCCAAGGAAGAGATTCG	58.796	55.000	0.00	0.00	43.78	3.34
2709	4892	4.464069	AGGAAGAGATTCGAAGGAGTTG	57.536	45.455	3.35	0.00	0.00	3.16
2714	4897	2.233922	GAGATTCGAAGGAGTTGGACCA	59.766	50.000	3.35	0.00	0.00	4.02
2715	4898	2.234908	AGATTCGAAGGAGTTGGACCAG	59.765	50.000	3.35	0.00	0.00	4.00
2756	4939	3.718956	CCCTCCTTAATTCCCATGTCTCT	59.281	47.826	0.00	0.00	0.00	3.10
2767	4950	5.440207	TCCCATGTCTCTGAATCAATCAA	57.560	39.130	0.00	0.00	37.67	2.57
2798	4981	6.764560	TGAAAGTGTCACTTACCTTAAACTCC	59.235	38.462	18.45	0.00	37.47	3.85
2801	4984	5.309806	AGTGTCACTTACCTTAAACTCCCAT	59.690	40.000	0.00	0.00	0.00	4.00
2835	5018	2.520741	CCCCCAACCAAACACGCT	60.521	61.111	0.00	0.00	0.00	5.07
2836	5019	2.727544	CCCCAACCAAACACGCTG	59.272	61.111	0.00	0.00	0.00	5.18
2837	5020	2.124693	CCCCAACCAAACACGCTGT	61.125	57.895	0.00	0.00	0.00	4.40
2838	5021	1.358759	CCCAACCAAACACGCTGTC	59.641	57.895	0.00	0.00	0.00	3.51
2839	5022	1.380403	CCCAACCAAACACGCTGTCA	61.380	55.000	0.00	0.00	0.00	3.58
2840	5023	0.453793	CCAACCAAACACGCTGTCAA	59.546	50.000	0.00	0.00	0.00	3.18
2841	5024	1.533756	CCAACCAAACACGCTGTCAAG	60.534	52.381	0.00	0.00	0.00	3.02
2842	5025	0.738389	AACCAAACACGCTGTCAAGG	59.262	50.000	0.00	0.00	0.00	3.61
2843	5026	0.393808	ACCAAACACGCTGTCAAGGT	60.394	50.000	0.00	0.00	0.00	3.50
2844	5027	0.738389	CCAAACACGCTGTCAAGGTT	59.262	50.000	0.00	0.00	0.00	3.50
2860	5043	8.268850	TGTCAAGGTTTCATTTTAGCTAGATC	57.731	34.615	0.00	0.00	0.00	2.75
2900	5083	7.602517	TTTGTTTTGTGGTCAATCGATTTTT	57.397	28.000	8.21	0.00	33.32	1.94
2986	5173	1.185315	ATTGGGCTGTTTGGATTCGG	58.815	50.000	0.00	0.00	0.00	4.30
2993	5180	2.228822	GCTGTTTGGATTCGGTTGACAT	59.771	45.455	0.00	0.00	0.00	3.06
2997	5184	4.693566	TGTTTGGATTCGGTTGACATCTAC	59.306	41.667	0.00	0.00	0.00	2.59
3019	5206	4.887655	ACTTTGGGTCAGTCGATTTTCTTT	59.112	37.500	0.00	0.00	0.00	2.52
3086	5275	9.848172	GTTTATTTTTGTTTTCAGCACATGTAG	57.152	29.630	0.00	0.00	0.00	2.74
3405	5929	9.347240	AGACTGCTCAAGTTGCATTATTATATT	57.653	29.630	0.00	0.00	40.07	1.28
3455	5979	4.803088	GCAATTTCAGTGCAAAGTTGTGTA	59.197	37.500	6.69	0.00	41.80	2.90
3519	6046	6.201044	ACCAATGTCGCTAATTTATTCTCTCG	59.799	38.462	0.00	0.00	0.00	4.04
3773	6328	8.814038	ATGCCACTATACTTCATTTCTTCTTT	57.186	30.769	0.00	0.00	0.00	2.52
3969	6531	6.377912	TCTTCTTAAAGGGTTCCATTTTCCA	58.622	36.000	6.79	0.00	33.03	3.53
4627	7203	9.469807	AATTTCTGTGTAAATTGCGTTCAAATA	57.530	25.926	0.00	0.00	37.60	1.40
4638	7214	5.574891	TGCGTTCAAATATTGCCATTACT	57.425	34.783	0.00	0.00	0.00	2.24
4809	7403	4.320788	GCTTCTTATGTGCAGAACAAAGCT	60.321	41.667	8.06	0.00	42.11	3.74
4869	7463	3.851128	GACCTGTAGCCGCTCCCC	61.851	72.222	0.00	0.00	0.00	4.81
4870	7464	4.715130	ACCTGTAGCCGCTCCCCA	62.715	66.667	0.00	0.00	0.00	4.96
4917	7511	3.867549	GTTACCGCCCAGTAACCAT	57.132	52.632	7.52	0.00	44.11	3.55
4948	7542	1.591183	CCCACGGGAAATTGCCTTG	59.409	57.895	1.41	3.05	37.50	3.61
4950	7544	1.535204	CCACGGGAAATTGCCTTGCT	61.535	55.000	1.41	0.00	0.00	3.91
4953	7547	0.602562	CGGGAAATTGCCTTGCTGAA	59.397	50.000	1.41	0.00	0.00	3.02
4991	7591	7.424227	TTGTGAATGAATTTTGGCTGAATTC	57.576	32.000	14.88	14.88	41.59	2.17
4998	7598	7.481275	TGAATTTTGGCTGAATTCTTTTCAC	57.519	32.000	19.41	0.00	41.70	3.18
5000	7600	7.225145	TGAATTTTGGCTGAATTCTTTTCACAG	59.775	33.333	19.41	0.00	41.70	3.66
5011	7611	9.086336	TGAATTCTTTTCACAGTCAAAATTCAC	57.914	29.630	7.05	0.00	37.11	3.18
5047	7647	2.306512	TGGTAACTGCCCGGTATTTTCT	59.693	45.455	0.00	0.00	37.61	2.52
5541	8150	4.978580	GCTTCACTTTTCATTCAACAGGAC	59.021	41.667	0.00	0.00	0.00	3.85
5561	8176	1.603802	CGTTGGTCAGCATGTGTTCTT	59.396	47.619	0.00	0.00	37.40	2.52
5562	8177	2.033299	CGTTGGTCAGCATGTGTTCTTT	59.967	45.455	0.00	0.00	37.40	2.52
5563	8178	3.489059	CGTTGGTCAGCATGTGTTCTTTT	60.489	43.478	0.00	0.00	37.40	2.27
5564	8179	3.988379	TGGTCAGCATGTGTTCTTTTC	57.012	42.857	0.00	0.00	37.40	2.29
5565	8180	3.286353	TGGTCAGCATGTGTTCTTTTCA	58.714	40.909	0.00	0.00	37.40	2.69
5566	8181	3.890756	TGGTCAGCATGTGTTCTTTTCAT	59.109	39.130	0.00	0.00	37.40	2.57
5571	8186	5.302568	TCAGCATGTGTTCTTTTCATTCCTT	59.697	36.000	0.00	0.00	37.40	3.36
5574	8189	6.703165	AGCATGTGTTCTTTTCATTCCTTTTC	59.297	34.615	0.00	0.00	0.00	2.29
5575	8190	6.073602	GCATGTGTTCTTTTCATTCCTTTTCC	60.074	38.462	0.00	0.00	0.00	3.13
5576	8191	6.537453	TGTGTTCTTTTCATTCCTTTTCCA	57.463	33.333	0.00	0.00	0.00	3.53
5578	8193	7.390027	TGTGTTCTTTTCATTCCTTTTCCAAA	58.610	30.769	0.00	0.00	0.00	3.28
5579	8194	7.880195	TGTGTTCTTTTCATTCCTTTTCCAAAA	59.120	29.630	0.00	0.00	0.00	2.44
5580	8195	8.726068	GTGTTCTTTTCATTCCTTTTCCAAAAA	58.274	29.630	0.00	0.00	0.00	1.94
5581	8196	9.460019	TGTTCTTTTCATTCCTTTTCCAAAAAT	57.540	25.926	0.00	0.00	0.00	1.82
5583	8198	9.460019	TTCTTTTCATTCCTTTTCCAAAAATGT	57.540	25.926	0.00	0.00	0.00	2.71
5584	8199	8.891720	TCTTTTCATTCCTTTTCCAAAAATGTG	58.108	29.630	0.00	0.00	0.00	3.21
5586	8201	8.572855	TTTCATTCCTTTTCCAAAAATGTGTT	57.427	26.923	0.00	0.00	0.00	3.32
5587	8202	7.784633	TCATTCCTTTTCCAAAAATGTGTTC	57.215	32.000	0.00	0.00	0.00	3.18
6067	8870	5.860941	TCTCTACCAATTCCAGCTCTTAG	57.139	43.478	0.00	0.00	0.00	2.18
6395	9300	0.328258	AGCGGCCAAAAGGTAGTGAT	59.672	50.000	2.24	0.00	0.00	3.06
6675	9623	4.321745	CGCAGTTGCAATTGATAGTCAAAC	59.678	41.667	24.46	3.62	39.47	2.93
6826	9785	8.398878	AGAAACTAAACCGTGGATTTTGATTA	57.601	30.769	0.00	0.00	0.00	1.75
7025	9986	1.001517	TTGGCGGGATGCTTTGCTA	60.002	52.632	0.00	0.00	45.43	3.49
7044	10007	3.370978	GCTAAAGTAAGCATGTTCGCTCA	59.629	43.478	0.00	0.00	42.89	4.26
7045	10008	4.493220	GCTAAAGTAAGCATGTTCGCTCAG	60.493	45.833	0.00	0.00	42.89	3.35
7046	10009	3.319137	AAGTAAGCATGTTCGCTCAGA	57.681	42.857	0.00	0.00	42.89	3.27
7110	10094	4.142622	ACAACCATGCTATGTTCATGTTCG	60.143	41.667	0.00	0.00	39.60	3.95
7123	10107	2.159099	TCATGTTCGGTGTAGGCAGATC	60.159	50.000	0.00	0.00	0.00	2.75
7198	10182	0.112606	TTGGTTTCCATTACCGGGCA	59.887	50.000	6.32	0.00	38.55	5.36
7281	10275	4.387256	CGTTCTTTCAGAAGCAGGTAAGAG	59.613	45.833	0.00	0.00	34.42	2.85
7334	10334	5.188327	TGTTGTCCAAATAACGCATTTCA	57.812	34.783	0.00	0.00	34.49	2.69
7343	10343	6.476380	CCAAATAACGCATTTCACAATAGCAT	59.524	34.615	0.00	0.00	34.49	3.79
8004	11053	3.616219	TGAAGTGTGTTTGCTTGGTACT	58.384	40.909	0.00	0.00	0.00	2.73
8005	11054	3.625764	TGAAGTGTGTTTGCTTGGTACTC	59.374	43.478	0.00	0.00	0.00	2.59
8006	11055	2.572290	AGTGTGTTTGCTTGGTACTCC	58.428	47.619	0.00	0.00	0.00	3.85
8007	11056	1.607148	GTGTGTTTGCTTGGTACTCCC	59.393	52.381	0.00	0.00	0.00	4.30
8008	11057	1.493022	TGTGTTTGCTTGGTACTCCCT	59.507	47.619	0.00	0.00	0.00	4.20
8009	11058	2.152016	GTGTTTGCTTGGTACTCCCTC	58.848	52.381	0.00	0.00	0.00	4.30
8010	11059	1.073284	TGTTTGCTTGGTACTCCCTCC	59.927	52.381	0.00	0.00	0.00	4.30
8011	11060	0.323629	TTTGCTTGGTACTCCCTCCG	59.676	55.000	0.00	0.00	0.00	4.63
8012	11061	0.834687	TTGCTTGGTACTCCCTCCGT	60.835	55.000	0.00	0.00	0.00	4.69
8013	11062	1.255667	TGCTTGGTACTCCCTCCGTC	61.256	60.000	0.00	0.00	0.00	4.79
8014	11063	1.957765	GCTTGGTACTCCCTCCGTCC	61.958	65.000	0.00	0.00	0.00	4.79
8015	11064	1.305549	TTGGTACTCCCTCCGTCCC	60.306	63.158	0.00	0.00	0.00	4.46
8016	11065	2.096707	TTGGTACTCCCTCCGTCCCA	62.097	60.000	0.00	0.00	0.00	4.37
8017	11066	1.305549	GGTACTCCCTCCGTCCCAA	60.306	63.158	0.00	0.00	0.00	4.12
8018	11067	0.906282	GGTACTCCCTCCGTCCCAAA	60.906	60.000	0.00	0.00	0.00	3.28
8019	11068	0.978907	GTACTCCCTCCGTCCCAAAA	59.021	55.000	0.00	0.00	0.00	2.44
8020	11069	1.558294	GTACTCCCTCCGTCCCAAAAT	59.442	52.381	0.00	0.00	0.00	1.82
8021	11070	1.961133	ACTCCCTCCGTCCCAAAATA	58.039	50.000	0.00	0.00	0.00	1.40
8022	11071	1.558294	ACTCCCTCCGTCCCAAAATAC	59.442	52.381	0.00	0.00	0.00	1.89
8023	11072	1.838077	CTCCCTCCGTCCCAAAATACT	59.162	52.381	0.00	0.00	0.00	2.12
8024	11073	2.238898	CTCCCTCCGTCCCAAAATACTT	59.761	50.000	0.00	0.00	0.00	2.24
8025	11074	2.026636	TCCCTCCGTCCCAAAATACTTG	60.027	50.000	0.00	0.00	0.00	3.16
8026	11075	2.290705	CCCTCCGTCCCAAAATACTTGT	60.291	50.000	0.00	0.00	0.00	3.16
8027	11076	3.007635	CCTCCGTCCCAAAATACTTGTC	58.992	50.000	0.00	0.00	0.00	3.18
8028	11077	2.671396	CTCCGTCCCAAAATACTTGTCG	59.329	50.000	0.00	0.00	0.00	4.35
8029	11078	1.735571	CCGTCCCAAAATACTTGTCGG	59.264	52.381	0.00	0.00	0.00	4.79
8030	11079	2.613474	CCGTCCCAAAATACTTGTCGGA	60.613	50.000	0.00	0.00	38.03	4.55
8031	11080	2.671396	CGTCCCAAAATACTTGTCGGAG	59.329	50.000	0.00	0.00	0.00	4.63
8032	11081	3.007635	GTCCCAAAATACTTGTCGGAGG	58.992	50.000	0.00	0.00	0.00	4.30
8033	11082	2.907696	TCCCAAAATACTTGTCGGAGGA	59.092	45.455	0.00	0.00	0.00	3.71
8034	11083	3.328343	TCCCAAAATACTTGTCGGAGGAA	59.672	43.478	0.00	0.00	0.00	3.36
8035	11084	4.018779	TCCCAAAATACTTGTCGGAGGAAT	60.019	41.667	0.00	0.00	0.00	3.01
8036	11085	4.096382	CCCAAAATACTTGTCGGAGGAATG	59.904	45.833	0.00	0.00	0.00	2.67
8037	11086	4.096382	CCAAAATACTTGTCGGAGGAATGG	59.904	45.833	0.00	0.00	0.00	3.16
8038	11087	4.837093	AAATACTTGTCGGAGGAATGGA	57.163	40.909	0.00	0.00	0.00	3.41
8039	11088	5.373812	AAATACTTGTCGGAGGAATGGAT	57.626	39.130	0.00	0.00	0.00	3.41
8040	11089	2.698855	ACTTGTCGGAGGAATGGATG	57.301	50.000	0.00	0.00	0.00	3.51
8041	11090	1.909302	ACTTGTCGGAGGAATGGATGT	59.091	47.619	0.00	0.00	0.00	3.06
8042	11091	3.104512	ACTTGTCGGAGGAATGGATGTA	58.895	45.455	0.00	0.00	0.00	2.29
8043	11092	3.711704	ACTTGTCGGAGGAATGGATGTAT	59.288	43.478	0.00	0.00	0.00	2.29
8044	11093	4.202264	ACTTGTCGGAGGAATGGATGTATC	60.202	45.833	0.00	0.00	0.00	2.24
8045	11094	3.576861	TGTCGGAGGAATGGATGTATCT	58.423	45.455	0.00	0.00	0.00	1.98
8046	11095	4.736473	TGTCGGAGGAATGGATGTATCTA	58.264	43.478	0.00	0.00	0.00	1.98
8047	11096	4.767409	TGTCGGAGGAATGGATGTATCTAG	59.233	45.833	0.00	0.00	0.00	2.43
8048	11097	5.010933	GTCGGAGGAATGGATGTATCTAGA	58.989	45.833	0.00	0.00	0.00	2.43
8049	11098	5.010933	TCGGAGGAATGGATGTATCTAGAC	58.989	45.833	0.00	0.00	0.00	2.59
8050	11099	4.142578	CGGAGGAATGGATGTATCTAGACG	60.143	50.000	0.00	0.00	0.00	4.18
8051	11100	4.767928	GGAGGAATGGATGTATCTAGACGT	59.232	45.833	0.00	0.00	0.00	4.34
8052	11101	5.944599	GGAGGAATGGATGTATCTAGACGTA	59.055	44.000	0.00	0.00	0.00	3.57
8053	11102	6.603997	GGAGGAATGGATGTATCTAGACGTAT	59.396	42.308	0.00	0.00	0.00	3.06
8054	11103	7.122948	GGAGGAATGGATGTATCTAGACGTATT	59.877	40.741	0.00	0.00	0.00	1.89
8055	11104	8.423906	AGGAATGGATGTATCTAGACGTATTT	57.576	34.615	0.00	0.00	0.00	1.40
8056	11105	8.871125	AGGAATGGATGTATCTAGACGTATTTT	58.129	33.333	0.00	0.00	0.00	1.82
8089	11138	9.807649	AGGTACATCAATTTTTATGCATTTCTC	57.192	29.630	3.54	0.00	0.00	2.87
8090	11139	9.034544	GGTACATCAATTTTTATGCATTTCTCC	57.965	33.333	3.54	0.00	0.00	3.71
8091	11140	7.760131	ACATCAATTTTTATGCATTTCTCCG	57.240	32.000	3.54	0.00	0.00	4.63
8092	11141	7.546358	ACATCAATTTTTATGCATTTCTCCGA	58.454	30.769	3.54	0.00	0.00	4.55
8093	11142	7.489113	ACATCAATTTTTATGCATTTCTCCGAC	59.511	33.333	3.54	0.00	0.00	4.79
8094	11143	6.027131	TCAATTTTTATGCATTTCTCCGACG	58.973	36.000	3.54	0.00	0.00	5.12
8095	11144	5.811399	ATTTTTATGCATTTCTCCGACGA	57.189	34.783	3.54	0.00	0.00	4.20
8096	11145	4.857871	TTTTATGCATTTCTCCGACGAG	57.142	40.909	3.54	0.00	37.48	4.18
8097	11146	3.520290	TTATGCATTTCTCCGACGAGT	57.480	42.857	3.54	0.00	37.40	4.18
8098	11147	4.642445	TTATGCATTTCTCCGACGAGTA	57.358	40.909	3.54	0.00	37.40	2.59
8099	11148	3.735237	ATGCATTTCTCCGACGAGTAT	57.265	42.857	0.00	0.00	37.40	2.12
8100	11149	3.520290	TGCATTTCTCCGACGAGTATT	57.480	42.857	0.00	0.00	37.40	1.89
8101	11150	3.857052	TGCATTTCTCCGACGAGTATTT	58.143	40.909	0.00	0.00	37.40	1.40
8102	11151	3.863424	TGCATTTCTCCGACGAGTATTTC	59.137	43.478	0.00	0.00	37.40	2.17
8103	11152	3.245519	GCATTTCTCCGACGAGTATTTCC	59.754	47.826	0.00	0.00	37.40	3.13
8104	11153	2.838386	TTCTCCGACGAGTATTTCCG	57.162	50.000	0.00	0.00	37.40	4.30
8118	11167	0.967380	TTTCCGGACGGAGGGAGTAC	60.967	60.000	13.64	0.00	46.06	2.73
8132	11213	5.297029	GGAGGGAGTACATTAAATCTTGTGC	59.703	44.000	0.00	0.00	0.00	4.57
8157	11238	8.961092	GCATGTATATGTATTTGTCAAAAGCAG	58.039	33.333	1.31	0.00	36.65	4.24
8205	11286	5.708544	AGGGCTCATTATGAATGGATTTGA	58.291	37.500	0.00	0.00	39.38	2.69
8262	11343	1.075836	ACTCTCACGGCTCTCCTGT	59.924	57.895	0.00	0.00	0.00	4.00
8264	11345	0.605589	CTCTCACGGCTCTCCTGTTT	59.394	55.000	0.00	0.00	0.00	2.83
8337	11422	4.161295	CCGGATTGGCGCTGGAGA	62.161	66.667	7.64	0.00	33.45	3.71
8341	11426	1.078143	GATTGGCGCTGGAGAAGGT	60.078	57.895	7.64	0.00	0.00	3.50
8343	11428	1.841302	ATTGGCGCTGGAGAAGGTGA	61.841	55.000	7.64	0.00	0.00	4.02
8452	11538	2.565841	GAGATGGTTGCTATCCACACC	58.434	52.381	0.00	0.00	37.81	4.16
8595	11682	1.589803	CGGTTCGTCTGGACCTTTTT	58.410	50.000	0.00	0.00	0.00	1.94
8598	11685	2.686405	GGTTCGTCTGGACCTTTTTGTT	59.314	45.455	0.00	0.00	0.00	2.83
8648	11735	0.179045	GTGCGATGCCCATTAGTCCT	60.179	55.000	0.00	0.00	0.00	3.85
8682	11793	2.233605	TAGTCCCGGTTCATGCCACG	62.234	60.000	0.00	0.00	0.00	4.94
8765	11876	3.230976	GTCCCATTTTCAAACTCCACCT	58.769	45.455	0.00	0.00	0.00	4.00
8766	11877	3.641436	GTCCCATTTTCAAACTCCACCTT	59.359	43.478	0.00	0.00	0.00	3.50

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
10	11	0.250338	AAGAACCCTTGTCCGAGTGC	60.250	55.000	0.00	0.00	0.00	4.40
11	12	2.353803	CCTAAGAACCCTTGTCCGAGTG	60.354	54.545	0.00	0.00	33.94	3.51
12	13	1.900486	CCTAAGAACCCTTGTCCGAGT	59.100	52.381	0.00	0.00	33.94	4.18
13	14	1.900486	ACCTAAGAACCCTTGTCCGAG	59.100	52.381	0.00	0.00	33.94	4.63
14	15	1.621814	CACCTAAGAACCCTTGTCCGA	59.378	52.381	0.00	0.00	33.94	4.55
15	16	1.944430	GCACCTAAGAACCCTTGTCCG	60.944	57.143	0.00	0.00	33.94	4.79
21	23	0.541863	CATCCGCACCTAAGAACCCT	59.458	55.000	0.00	0.00	0.00	4.34
83	86	2.954684	TTCATGCTTCCGGCGAGGT	61.955	57.895	9.30	0.00	45.43	3.85
183	186	3.031013	CCTCGGCCCTTGGATTAAAATT	58.969	45.455	0.00	0.00	0.00	1.82
213	216	4.663166	CAGTGGACTACATGTAAGTCGAG	58.337	47.826	19.94	8.72	33.72	4.04
263	267	9.975218	AAAACTAAGATTTGAAGATAAGCCCTA	57.025	29.630	0.00	0.00	0.00	3.53
265	269	8.191446	GGAAAACTAAGATTTGAAGATAAGCCC	58.809	37.037	0.00	0.00	0.00	5.19
290	424	9.450807	CAACGAAATTGAGCCTTATAAAATAGG	57.549	33.333	0.00	0.00	41.23	2.57
306	440	5.107109	TGTGATGAGGAACAACGAAATTG	57.893	39.130	0.00	0.00	44.60	2.32
321	455	4.566278	CCTTGGAATCTGGACTTGTGATGA	60.566	45.833	0.00	0.00	0.00	2.92
327	461	1.089920	CGCCTTGGAATCTGGACTTG	58.910	55.000	0.00	0.00	0.00	3.16
332	466	0.101759	CAATGCGCCTTGGAATCTGG	59.898	55.000	16.61	0.00	0.00	3.86
351	485	8.801913	GTCAATTTTCTCTTAATACTTGCATGC	58.198	33.333	11.82	11.82	0.00	4.06
352	486	9.294030	GGTCAATTTTCTCTTAATACTTGCATG	57.706	33.333	0.00	0.00	0.00	4.06
355	489	9.860898	ATTGGTCAATTTTCTCTTAATACTTGC	57.139	29.630	0.00	0.00	0.00	4.01
357	491	9.860898	GCATTGGTCAATTTTCTCTTAATACTT	57.139	29.630	0.00	0.00	0.00	2.24
358	492	9.023962	TGCATTGGTCAATTTTCTCTTAATACT	57.976	29.630	0.00	0.00	0.00	2.12
359	493	9.807649	ATGCATTGGTCAATTTTCTCTTAATAC	57.192	29.630	0.00	0.00	0.00	1.89
360	494	9.806203	CATGCATTGGTCAATTTTCTCTTAATA	57.194	29.630	0.00	0.00	0.00	0.98
361	495	8.316214	ACATGCATTGGTCAATTTTCTCTTAAT	58.684	29.630	0.00	0.00	0.00	1.40
362	496	7.669427	ACATGCATTGGTCAATTTTCTCTTAA	58.331	30.769	0.00	0.00	0.00	1.85
363	497	7.230849	ACATGCATTGGTCAATTTTCTCTTA	57.769	32.000	0.00	0.00	0.00	2.10
364	498	6.105397	ACATGCATTGGTCAATTTTCTCTT	57.895	33.333	0.00	0.00	0.00	2.85
365	499	5.733620	ACATGCATTGGTCAATTTTCTCT	57.266	34.783	0.00	0.00	0.00	3.10
366	500	6.624423	AGTACATGCATTGGTCAATTTTCTC	58.376	36.000	0.00	0.00	0.00	2.87
367	501	6.594788	AGTACATGCATTGGTCAATTTTCT	57.405	33.333	0.00	0.00	0.00	2.52
368	502	6.867816	TCAAGTACATGCATTGGTCAATTTTC	59.132	34.615	0.00	0.00	0.00	2.29
369	503	6.757237	TCAAGTACATGCATTGGTCAATTTT	58.243	32.000	0.00	0.00	0.00	1.82
370	504	6.343716	TCAAGTACATGCATTGGTCAATTT	57.656	33.333	0.00	0.00	0.00	1.82
371	505	5.981088	TCAAGTACATGCATTGGTCAATT	57.019	34.783	0.00	0.00	0.00	2.32
372	506	5.680408	GCATCAAGTACATGCATTGGTCAAT	60.680	40.000	10.82	0.00	45.19	2.57
373	507	4.380761	GCATCAAGTACATGCATTGGTCAA	60.381	41.667	10.82	0.00	45.19	3.18
374	508	3.129113	GCATCAAGTACATGCATTGGTCA	59.871	43.478	10.82	0.00	45.19	4.02
375	509	3.699067	GCATCAAGTACATGCATTGGTC	58.301	45.455	10.82	0.00	45.19	4.02
376	510	3.788333	GCATCAAGTACATGCATTGGT	57.212	42.857	10.82	0.00	45.19	3.67
383	517	4.301637	ACATGCATGCATCAAGTACATG	57.698	40.909	30.07	19.01	43.21	3.21
384	518	6.644248	AATACATGCATGCATCAAGTACAT	57.356	33.333	30.07	17.30	33.90	2.29
385	519	6.541641	TGTAATACATGCATGCATCAAGTACA	59.458	34.615	29.76	29.76	33.90	2.90
386	520	6.958255	TGTAATACATGCATGCATCAAGTAC	58.042	36.000	30.07	28.06	33.90	2.73
387	521	7.565323	TTGTAATACATGCATGCATCAAGTA	57.435	32.000	30.07	26.30	33.90	2.24
388	522	6.453926	TTGTAATACATGCATGCATCAAGT	57.546	33.333	30.07	25.11	33.90	3.16
389	523	7.940178	AATTGTAATACATGCATGCATCAAG	57.060	32.000	30.07	20.89	33.90	3.02
390	524	9.984190	ATTAATTGTAATACATGCATGCATCAA	57.016	25.926	30.07	26.48	33.90	2.57
436	570	8.619546	CCAATTAATGCTTTTGTTTTCCTCAAA	58.380	29.630	0.00	0.00	33.76	2.69
437	571	7.228308	CCCAATTAATGCTTTTGTTTTCCTCAA	59.772	33.333	0.00	0.00	0.00	3.02
438	572	6.709846	CCCAATTAATGCTTTTGTTTTCCTCA	59.290	34.615	0.00	0.00	0.00	3.86
439	573	6.710295	ACCCAATTAATGCTTTTGTTTTCCTC	59.290	34.615	0.00	0.00	0.00	3.71
440	574	6.600388	ACCCAATTAATGCTTTTGTTTTCCT	58.400	32.000	0.00	0.00	0.00	3.36
441	575	6.875948	ACCCAATTAATGCTTTTGTTTTCC	57.124	33.333	0.00	0.00	0.00	3.13
442	576	8.601845	AGTACCCAATTAATGCTTTTGTTTTC	57.398	30.769	0.00	0.00	0.00	2.29
443	577	8.972458	AAGTACCCAATTAATGCTTTTGTTTT	57.028	26.923	0.00	0.00	0.00	2.43
444	578	8.972458	AAAGTACCCAATTAATGCTTTTGTTT	57.028	26.923	0.00	0.00	0.00	2.83
445	579	8.835439	CAAAAGTACCCAATTAATGCTTTTGTT	58.165	29.630	19.65	0.52	42.55	2.83
446	580	7.041440	GCAAAAGTACCCAATTAATGCTTTTGT	60.041	33.333	23.93	5.44	45.96	2.83
447	581	7.041508	TGCAAAAGTACCCAATTAATGCTTTTG	60.042	33.333	21.62	21.62	46.47	2.44
448	582	6.995091	TGCAAAAGTACCCAATTAATGCTTTT	59.005	30.769	0.00	0.00	35.79	2.27
449	583	6.529220	TGCAAAAGTACCCAATTAATGCTTT	58.471	32.000	0.00	0.00	32.74	3.51
450	584	6.107901	TGCAAAAGTACCCAATTAATGCTT	57.892	33.333	0.00	0.00	32.74	3.91
451	585	5.736951	TGCAAAAGTACCCAATTAATGCT	57.263	34.783	0.00	0.00	32.74	3.79
452	586	6.793492	TTTGCAAAAGTACCCAATTAATGC	57.207	33.333	10.02	0.00	0.00	3.56
455	589	9.832445	TTGTAATTTGCAAAAGTACCCAATTAA	57.168	25.926	23.32	13.10	0.00	1.40
456	590	9.832445	TTTGTAATTTGCAAAAGTACCCAATTA	57.168	25.926	23.32	11.11	33.51	1.40
457	591	8.738645	TTTGTAATTTGCAAAAGTACCCAATT	57.261	26.923	23.32	11.89	33.51	2.32
458	592	8.738645	TTTTGTAATTTGCAAAAGTACCCAAT	57.261	26.923	23.32	2.94	39.83	3.16
459	593	8.561738	TTTTTGTAATTTGCAAAAGTACCCAA	57.438	26.923	23.32	16.81	43.70	4.12
460	594	7.824779	ACTTTTTGTAATTTGCAAAAGTACCCA	59.175	29.630	23.32	13.46	43.70	4.51
461	595	8.203937	ACTTTTTGTAATTTGCAAAAGTACCC	57.796	30.769	23.32	9.49	43.70	3.69
468	602	8.831550	GGTGGAATACTTTTTGTAATTTGCAAA	58.168	29.630	15.44	15.44	34.45	3.68
469	603	7.987458	TGGTGGAATACTTTTTGTAATTTGCAA	59.013	29.630	0.00	0.00	34.45	4.08
470	604	7.439655	GTGGTGGAATACTTTTTGTAATTTGCA	59.560	33.333	0.00	0.00	34.45	4.08
471	605	7.655732	AGTGGTGGAATACTTTTTGTAATTTGC	59.344	33.333	0.00	0.00	34.45	3.68
472	606	9.191995	GAGTGGTGGAATACTTTTTGTAATTTG	57.808	33.333	0.00	0.00	34.45	2.32
473	607	8.919145	TGAGTGGTGGAATACTTTTTGTAATTT	58.081	29.630	0.00	0.00	34.45	1.82
474	608	8.357402	GTGAGTGGTGGAATACTTTTTGTAATT	58.643	33.333	0.00	0.00	34.45	1.40
475	609	7.039993	GGTGAGTGGTGGAATACTTTTTGTAAT	60.040	37.037	0.00	0.00	34.45	1.89
476	610	6.263617	GGTGAGTGGTGGAATACTTTTTGTAA	59.736	38.462	0.00	0.00	34.45	2.41
477	611	5.766174	GGTGAGTGGTGGAATACTTTTTGTA	59.234	40.000	0.00	0.00	35.37	2.41
478	612	4.583073	GGTGAGTGGTGGAATACTTTTTGT	59.417	41.667	0.00	0.00	0.00	2.83
479	613	4.582656	TGGTGAGTGGTGGAATACTTTTTG	59.417	41.667	0.00	0.00	0.00	2.44
480	614	4.798882	TGGTGAGTGGTGGAATACTTTTT	58.201	39.130	0.00	0.00	0.00	1.94
481	615	4.447138	TGGTGAGTGGTGGAATACTTTT	57.553	40.909	0.00	0.00	0.00	2.27
482	616	4.289672	AGATGGTGAGTGGTGGAATACTTT	59.710	41.667	0.00	0.00	0.00	2.66
483	617	3.846588	AGATGGTGAGTGGTGGAATACTT	59.153	43.478	0.00	0.00	0.00	2.24
484	618	3.454858	AGATGGTGAGTGGTGGAATACT	58.545	45.455	0.00	0.00	0.00	2.12
485	619	3.914426	AGATGGTGAGTGGTGGAATAC	57.086	47.619	0.00	0.00	0.00	1.89
486	620	5.467738	AGATAGATGGTGAGTGGTGGAATA	58.532	41.667	0.00	0.00	0.00	1.75
487	621	4.302067	AGATAGATGGTGAGTGGTGGAAT	58.698	43.478	0.00	0.00	0.00	3.01
488	622	3.724478	AGATAGATGGTGAGTGGTGGAA	58.276	45.455	0.00	0.00	0.00	3.53
489	623	3.404869	AGATAGATGGTGAGTGGTGGA	57.595	47.619	0.00	0.00	0.00	4.02
490	624	3.432749	CCAAGATAGATGGTGAGTGGTGG	60.433	52.174	0.00	0.00	33.08	4.61
491	625	3.801698	CCAAGATAGATGGTGAGTGGTG	58.198	50.000	0.00	0.00	33.08	4.17
500	634	7.636150	AAATCTCACAAACCAAGATAGATGG	57.364	36.000	0.00	0.00	43.84	3.51
501	635	9.350357	CAAAAATCTCACAAACCAAGATAGATG	57.650	33.333	0.00	0.00	0.00	2.90
502	636	9.300681	TCAAAAATCTCACAAACCAAGATAGAT	57.699	29.630	0.00	0.00	0.00	1.98
503	637	8.690203	TCAAAAATCTCACAAACCAAGATAGA	57.310	30.769	0.00	0.00	0.00	1.98
504	638	9.918630	ATTCAAAAATCTCACAAACCAAGATAG	57.081	29.630	0.00	0.00	0.00	2.08
506	640	9.048446	CAATTCAAAAATCTCACAAACCAAGAT	57.952	29.630	0.00	0.00	0.00	2.40
507	641	8.256605	TCAATTCAAAAATCTCACAAACCAAGA	58.743	29.630	0.00	0.00	0.00	3.02
508	642	8.422973	TCAATTCAAAAATCTCACAAACCAAG	57.577	30.769	0.00	0.00	0.00	3.61
509	643	8.663911	GTTCAATTCAAAAATCTCACAAACCAA	58.336	29.630	0.00	0.00	0.00	3.67
510	644	8.040132	AGTTCAATTCAAAAATCTCACAAACCA	58.960	29.630	0.00	0.00	0.00	3.67
511	645	8.424274	AGTTCAATTCAAAAATCTCACAAACC	57.576	30.769	0.00	0.00	0.00	3.27
512	646	9.693157	CAAGTTCAATTCAAAAATCTCACAAAC	57.307	29.630	0.00	0.00	0.00	2.93
513	647	9.434420	ACAAGTTCAATTCAAAAATCTCACAAA	57.566	25.926	0.00	0.00	0.00	2.83
519	653	9.030301	CGGTTTACAAGTTCAATTCAAAAATCT	57.970	29.630	0.00	0.00	0.00	2.40
520	654	8.272866	CCGGTTTACAAGTTCAATTCAAAAATC	58.727	33.333	0.00	0.00	0.00	2.17
521	655	7.982354	TCCGGTTTACAAGTTCAATTCAAAAAT	59.018	29.630	0.00	0.00	0.00	1.82
522	656	7.321153	TCCGGTTTACAAGTTCAATTCAAAAA	58.679	30.769	0.00	0.00	0.00	1.94
523	657	6.864342	TCCGGTTTACAAGTTCAATTCAAAA	58.136	32.000	0.00	0.00	0.00	2.44
524	658	6.452494	TCCGGTTTACAAGTTCAATTCAAA	57.548	33.333	0.00	0.00	0.00	2.69
525	659	6.452494	TTCCGGTTTACAAGTTCAATTCAA	57.548	33.333	0.00	0.00	0.00	2.69
526	660	6.452494	TTTCCGGTTTACAAGTTCAATTCA	57.548	33.333	0.00	0.00	0.00	2.57
527	661	5.918576	CCTTTCCGGTTTACAAGTTCAATTC	59.081	40.000	0.00	0.00	0.00	2.17
528	662	5.595133	TCCTTTCCGGTTTACAAGTTCAATT	59.405	36.000	0.00	0.00	0.00	2.32
529	663	5.134661	TCCTTTCCGGTTTACAAGTTCAAT	58.865	37.500	0.00	0.00	0.00	2.57
530	664	4.525024	TCCTTTCCGGTTTACAAGTTCAA	58.475	39.130	0.00	0.00	0.00	2.69
531	665	4.131596	CTCCTTTCCGGTTTACAAGTTCA	58.868	43.478	0.00	0.00	0.00	3.18
532	666	3.501062	CCTCCTTTCCGGTTTACAAGTTC	59.499	47.826	0.00	0.00	0.00	3.01
533	667	3.483421	CCTCCTTTCCGGTTTACAAGTT	58.517	45.455	0.00	0.00	0.00	2.66
534	668	2.224695	CCCTCCTTTCCGGTTTACAAGT	60.225	50.000	0.00	0.00	0.00	3.16
535	669	2.039348	TCCCTCCTTTCCGGTTTACAAG	59.961	50.000	0.00	0.00	0.00	3.16
536	670	2.039348	CTCCCTCCTTTCCGGTTTACAA	59.961	50.000	0.00	0.00	0.00	2.41
537	671	1.626825	CTCCCTCCTTTCCGGTTTACA	59.373	52.381	0.00	0.00	0.00	2.41
538	672	1.627329	ACTCCCTCCTTTCCGGTTTAC	59.373	52.381	0.00	0.00	0.00	2.01
539	673	2.034436	ACTCCCTCCTTTCCGGTTTA	57.966	50.000	0.00	0.00	0.00	2.01
540	674	1.907255	CTACTCCCTCCTTTCCGGTTT	59.093	52.381	0.00	0.00	0.00	3.27
541	675	1.203275	ACTACTCCCTCCTTTCCGGTT	60.203	52.381	0.00	0.00	0.00	4.44
542	676	0.412640	ACTACTCCCTCCTTTCCGGT	59.587	55.000	0.00	0.00	0.00	5.28
543	677	2.030371	GTACTACTCCCTCCTTTCCGG	58.970	57.143	0.00	0.00	0.00	5.14
544	678	1.674962	CGTACTACTCCCTCCTTTCCG	59.325	57.143	0.00	0.00	0.00	4.30
545	679	2.732763	ACGTACTACTCCCTCCTTTCC	58.267	52.381	0.00	0.00	0.00	3.13
546	680	5.591877	TGAATACGTACTACTCCCTCCTTTC	59.408	44.000	0.00	0.00	0.00	2.62
547	681	5.513233	TGAATACGTACTACTCCCTCCTTT	58.487	41.667	0.00	0.00	0.00	3.11
548	682	5.121380	TGAATACGTACTACTCCCTCCTT	57.879	43.478	0.00	0.00	0.00	3.36
549	683	4.785346	TGAATACGTACTACTCCCTCCT	57.215	45.455	0.00	0.00	0.00	3.69
550	684	4.153835	CGATGAATACGTACTACTCCCTCC	59.846	50.000	0.00	0.00	0.00	4.30
551	685	4.754114	ACGATGAATACGTACTACTCCCTC	59.246	45.833	0.00	0.00	42.17	4.30
552	686	4.712476	ACGATGAATACGTACTACTCCCT	58.288	43.478	0.00	0.00	42.17	4.20
561	695	4.067896	GGAGGGAGTACGATGAATACGTA	58.932	47.826	0.00	0.00	43.62	3.57
562	696	2.883386	GGAGGGAGTACGATGAATACGT	59.117	50.000	0.00	0.00	45.75	3.57
563	697	2.095869	CGGAGGGAGTACGATGAATACG	60.096	54.545	0.00	0.00	0.00	3.06
564	698	2.883386	ACGGAGGGAGTACGATGAATAC	59.117	50.000	0.00	0.00	0.00	1.89
565	699	3.144506	GACGGAGGGAGTACGATGAATA	58.855	50.000	0.00	0.00	0.00	1.75
566	700	1.955080	GACGGAGGGAGTACGATGAAT	59.045	52.381	0.00	0.00	0.00	2.57
567	701	1.064906	AGACGGAGGGAGTACGATGAA	60.065	52.381	0.00	0.00	0.00	2.57
568	702	0.545171	AGACGGAGGGAGTACGATGA	59.455	55.000	0.00	0.00	0.00	2.92
569	703	2.144730	CTAGACGGAGGGAGTACGATG	58.855	57.143	0.00	0.00	0.00	3.84
570	704	1.072015	CCTAGACGGAGGGAGTACGAT	59.928	57.143	0.00	0.00	32.39	3.73
571	705	0.467384	CCTAGACGGAGGGAGTACGA	59.533	60.000	0.00	0.00	32.39	3.43
572	706	0.179936	ACCTAGACGGAGGGAGTACG	59.820	60.000	5.42	0.00	41.36	3.67
573	707	1.211457	TCACCTAGACGGAGGGAGTAC	59.789	57.143	5.42	0.00	41.36	2.73
574	708	1.489649	CTCACCTAGACGGAGGGAGTA	59.510	57.143	5.42	0.00	41.36	2.59
575	709	0.256464	CTCACCTAGACGGAGGGAGT	59.744	60.000	5.42	0.00	41.36	3.85
576	710	0.256464	ACTCACCTAGACGGAGGGAG	59.744	60.000	12.80	12.80	41.36	4.30
577	711	1.588239	TACTCACCTAGACGGAGGGA	58.412	55.000	5.42	0.16	41.36	4.20
578	712	2.299521	CTTACTCACCTAGACGGAGGG	58.700	57.143	5.42	0.00	41.36	4.30
579	713	2.944349	GACTTACTCACCTAGACGGAGG	59.056	54.545	0.00	0.00	42.89	4.30
580	714	3.607741	TGACTTACTCACCTAGACGGAG	58.392	50.000	0.00	0.00	36.31	4.63
581	715	3.708403	TGACTTACTCACCTAGACGGA	57.292	47.619	0.00	0.00	36.31	4.69
582	716	4.200874	AGATGACTTACTCACCTAGACGG	58.799	47.826	0.00	0.00	39.35	4.79
583	717	5.821516	AAGATGACTTACTCACCTAGACG	57.178	43.478	0.00	0.00	34.28	4.18
584	718	6.829811	ACCTAAGATGACTTACTCACCTAGAC	59.170	42.308	0.00	0.00	37.53	2.59
585	719	6.971340	ACCTAAGATGACTTACTCACCTAGA	58.029	40.000	0.00	0.00	37.53	2.43
586	720	7.122948	ACAACCTAAGATGACTTACTCACCTAG	59.877	40.741	0.00	0.00	37.53	3.02
587	721	6.952358	ACAACCTAAGATGACTTACTCACCTA	59.048	38.462	0.00	0.00	37.53	3.08
588	722	5.780793	ACAACCTAAGATGACTTACTCACCT	59.219	40.000	0.00	0.00	37.53	4.00
589	723	5.869888	CACAACCTAAGATGACTTACTCACC	59.130	44.000	0.00	0.00	37.53	4.02
590	724	5.348997	GCACAACCTAAGATGACTTACTCAC	59.651	44.000	0.00	0.00	37.53	3.51
591	725	5.011635	TGCACAACCTAAGATGACTTACTCA	59.988	40.000	0.00	0.00	37.53	3.41
592	726	5.479306	TGCACAACCTAAGATGACTTACTC	58.521	41.667	0.00	0.00	37.53	2.59
593	727	5.483685	TGCACAACCTAAGATGACTTACT	57.516	39.130	0.00	0.00	37.53	2.24
594	728	5.005779	CGATGCACAACCTAAGATGACTTAC	59.994	44.000	0.00	0.00	37.53	2.34
595	729	5.109210	CGATGCACAACCTAAGATGACTTA	58.891	41.667	0.00	0.00	37.53	2.24
596	730	3.935203	CGATGCACAACCTAAGATGACTT	59.065	43.478	0.00	0.00	39.81	3.01
597	731	3.055819	ACGATGCACAACCTAAGATGACT	60.056	43.478	0.00	0.00	0.00	3.41
598	732	3.062639	CACGATGCACAACCTAAGATGAC	59.937	47.826	0.00	0.00	0.00	3.06
599	733	3.056179	TCACGATGCACAACCTAAGATGA	60.056	43.478	0.00	0.00	0.00	2.92
600	734	3.062639	GTCACGATGCACAACCTAAGATG	59.937	47.826	0.00	0.00	0.00	2.90
601	735	3.262420	GTCACGATGCACAACCTAAGAT	58.738	45.455	0.00	0.00	0.00	2.40
602	736	2.611971	GGTCACGATGCACAACCTAAGA	60.612	50.000	0.00	0.00	0.00	2.10
603	737	1.732259	GGTCACGATGCACAACCTAAG	59.268	52.381	0.00	0.00	0.00	2.18
604	738	1.070914	TGGTCACGATGCACAACCTAA	59.929	47.619	0.00	0.00	0.00	2.69
605	739	0.682292	TGGTCACGATGCACAACCTA	59.318	50.000	0.00	0.00	0.00	3.08
606	740	0.179032	TTGGTCACGATGCACAACCT	60.179	50.000	0.00	0.00	0.00	3.50
607	741	0.238289	CTTGGTCACGATGCACAACC	59.762	55.000	0.00	0.00	0.00	3.77
608	742	0.238289	CCTTGGTCACGATGCACAAC	59.762	55.000	0.00	0.00	0.00	3.32
609	743	0.107643	TCCTTGGTCACGATGCACAA	59.892	50.000	0.00	0.00	0.00	3.33
610	744	0.320683	CTCCTTGGTCACGATGCACA	60.321	55.000	0.00	0.00	0.00	4.57
611	745	1.021390	CCTCCTTGGTCACGATGCAC	61.021	60.000	0.00	0.00	0.00	4.57
612	746	1.191489	TCCTCCTTGGTCACGATGCA	61.191	55.000	0.00	0.00	37.07	3.96
613	747	0.460987	CTCCTCCTTGGTCACGATGC	60.461	60.000	0.00	0.00	37.07	3.91
614	748	1.135915	CTCTCCTCCTTGGTCACGATG	59.864	57.143	0.00	0.00	37.07	3.84
615	749	1.479709	CTCTCCTCCTTGGTCACGAT	58.520	55.000	0.00	0.00	37.07	3.73
616	750	0.612174	CCTCTCCTCCTTGGTCACGA	60.612	60.000	0.00	0.00	37.07	4.35
617	751	0.612174	TCCTCTCCTCCTTGGTCACG	60.612	60.000	0.00	0.00	37.07	4.35
618	752	1.645710	TTCCTCTCCTCCTTGGTCAC	58.354	55.000	0.00	0.00	37.07	3.67
619	753	2.372172	GTTTTCCTCTCCTCCTTGGTCA	59.628	50.000	0.00	0.00	37.07	4.02
620	754	2.372172	TGTTTTCCTCTCCTCCTTGGTC	59.628	50.000	0.00	0.00	37.07	4.02
621	755	2.418669	TGTTTTCCTCTCCTCCTTGGT	58.581	47.619	0.00	0.00	37.07	3.67
622	756	3.073062	TCTTGTTTTCCTCTCCTCCTTGG	59.927	47.826	0.00	0.00	37.10	3.61
623	757	4.322567	CTCTTGTTTTCCTCTCCTCCTTG	58.677	47.826	0.00	0.00	0.00	3.61
624	758	3.329225	CCTCTTGTTTTCCTCTCCTCCTT	59.671	47.826	0.00	0.00	0.00	3.36
625	759	2.909662	CCTCTTGTTTTCCTCTCCTCCT	59.090	50.000	0.00	0.00	0.00	3.69
626	760	2.616765	GCCTCTTGTTTTCCTCTCCTCC	60.617	54.545	0.00	0.00	0.00	4.30
627	761	2.039084	TGCCTCTTGTTTTCCTCTCCTC	59.961	50.000	0.00	0.00	0.00	3.71
628	762	2.057922	TGCCTCTTGTTTTCCTCTCCT	58.942	47.619	0.00	0.00	0.00	3.69
629	763	2.568623	TGCCTCTTGTTTTCCTCTCC	57.431	50.000	0.00	0.00	0.00	3.71
630	764	6.151817	ACATTAATGCCTCTTGTTTTCCTCTC	59.848	38.462	15.48	0.00	0.00	3.20
631	765	6.012745	ACATTAATGCCTCTTGTTTTCCTCT	58.987	36.000	15.48	0.00	0.00	3.69
632	766	6.272822	ACATTAATGCCTCTTGTTTTCCTC	57.727	37.500	15.48	0.00	0.00	3.71
633	767	6.670695	AACATTAATGCCTCTTGTTTTCCT	57.329	33.333	15.48	0.00	0.00	3.36
634	768	9.435688	AATAAACATTAATGCCTCTTGTTTTCC	57.564	29.630	15.48	0.00	40.11	3.13
637	771	8.720562	GCAAATAAACATTAATGCCTCTTGTTT	58.279	29.630	15.48	10.24	41.76	2.83
638	772	8.096414	AGCAAATAAACATTAATGCCTCTTGTT	58.904	29.630	15.48	8.03	34.44	2.83
639	773	7.614494	AGCAAATAAACATTAATGCCTCTTGT	58.386	30.769	15.48	0.38	34.44	3.16
640	774	9.585099	TTAGCAAATAAACATTAATGCCTCTTG	57.415	29.630	15.48	12.68	34.44	3.02
687	821	2.806244	ACACGAATGCAGTGGTTAGTTC	59.194	45.455	0.00	0.00	43.41	3.01
688	822	2.846193	ACACGAATGCAGTGGTTAGTT	58.154	42.857	0.00	0.00	43.41	2.24
689	823	2.543777	ACACGAATGCAGTGGTTAGT	57.456	45.000	0.00	0.00	43.41	2.24
690	824	3.249799	TCAAACACGAATGCAGTGGTTAG	59.750	43.478	7.46	3.82	46.52	2.34
691	825	3.206964	TCAAACACGAATGCAGTGGTTA	58.793	40.909	7.46	0.00	46.52	2.85
693	827	1.674359	TCAAACACGAATGCAGTGGT	58.326	45.000	9.15	2.58	41.97	4.16
694	828	2.995466	ATCAAACACGAATGCAGTGG	57.005	45.000	9.15	1.89	43.41	4.00
695	829	4.389992	AGACTATCAAACACGAATGCAGTG	59.610	41.667	0.00	0.00	44.57	3.66
699	833	5.530519	TTGAGACTATCAAACACGAATGC	57.469	39.130	0.00	0.00	45.00	3.56
709	843	8.846943	TGCTTTTAATGACTTGAGACTATCAA	57.153	30.769	0.00	0.00	45.79	2.57
711	845	7.854916	GCATGCTTTTAATGACTTGAGACTATC	59.145	37.037	11.37	0.00	0.00	2.08
712	846	7.337689	TGCATGCTTTTAATGACTTGAGACTAT	59.662	33.333	20.33	0.00	0.00	2.12
713	847	6.654582	TGCATGCTTTTAATGACTTGAGACTA	59.345	34.615	20.33	0.00	0.00	2.59
714	848	5.474532	TGCATGCTTTTAATGACTTGAGACT	59.525	36.000	20.33	0.00	0.00	3.24
715	849	5.570589	GTGCATGCTTTTAATGACTTGAGAC	59.429	40.000	20.33	0.00	0.00	3.36
717	851	5.344128	GTGTGCATGCTTTTAATGACTTGAG	59.656	40.000	20.33	0.00	0.00	3.02
719	853	4.386652	GGTGTGCATGCTTTTAATGACTTG	59.613	41.667	20.33	0.00	0.00	3.16
721	855	3.056607	GGGTGTGCATGCTTTTAATGACT	60.057	43.478	20.33	0.00	0.00	3.41
722	856	3.253230	GGGTGTGCATGCTTTTAATGAC	58.747	45.455	20.33	6.41	0.00	3.06
723	857	2.233431	GGGGTGTGCATGCTTTTAATGA	59.767	45.455	20.33	0.00	0.00	2.57
724	858	2.234414	AGGGGTGTGCATGCTTTTAATG	59.766	45.455	20.33	0.00	0.00	1.90
726	860	2.008242	AGGGGTGTGCATGCTTTTAA	57.992	45.000	20.33	0.00	0.00	1.52
727	861	1.617850	CAAGGGGTGTGCATGCTTTTA	59.382	47.619	20.33	0.00	0.00	1.52
728	862	0.393820	CAAGGGGTGTGCATGCTTTT	59.606	50.000	20.33	0.07	0.00	2.27
730	864	1.152483	ACAAGGGGTGTGCATGCTT	60.152	52.632	20.33	0.00	39.72	3.91
731	865	1.604593	GACAAGGGGTGTGCATGCT	60.605	57.895	20.33	0.00	41.96	3.79
732	866	1.589716	GAGACAAGGGGTGTGCATGC	61.590	60.000	11.82	11.82	41.96	4.06
733	867	0.037303	AGAGACAAGGGGTGTGCATG	59.963	55.000	0.00	0.00	41.96	4.06
734	868	0.773644	AAGAGACAAGGGGTGTGCAT	59.226	50.000	0.00	0.00	41.96	3.96
735	869	1.429930	TAAGAGACAAGGGGTGTGCA	58.570	50.000	0.00	0.00	41.96	4.57
736	870	2.749621	CAATAAGAGACAAGGGGTGTGC	59.250	50.000	0.00	0.00	41.96	4.57
737	871	3.244911	ACCAATAAGAGACAAGGGGTGTG	60.245	47.826	0.00	0.00	41.96	3.82
738	872	2.986728	ACCAATAAGAGACAAGGGGTGT	59.013	45.455	0.00	0.00	45.74	4.16
739	873	3.721087	ACCAATAAGAGACAAGGGGTG	57.279	47.619	0.00	0.00	0.00	4.61
740	874	3.655777	TCAACCAATAAGAGACAAGGGGT	59.344	43.478	0.00	0.00	0.00	4.95
741	875	4.301072	TCAACCAATAAGAGACAAGGGG	57.699	45.455	0.00	0.00	0.00	4.79
742	876	7.012704	CACATATCAACCAATAAGAGACAAGGG	59.987	40.741	0.00	0.00	0.00	3.95
744	878	8.722480	TCACATATCAACCAATAAGAGACAAG	57.278	34.615	0.00	0.00	0.00	3.16
745	879	9.166173	CTTCACATATCAACCAATAAGAGACAA	57.834	33.333	0.00	0.00	0.00	3.18
747	881	8.948631	TCTTCACATATCAACCAATAAGAGAC	57.051	34.615	0.00	0.00	0.00	3.36
748	882	9.958180	TTTCTTCACATATCAACCAATAAGAGA	57.042	29.630	0.00	0.00	0.00	3.10
749	883	9.994432	GTTTCTTCACATATCAACCAATAAGAG	57.006	33.333	0.00	0.00	0.00	2.85
750	884	9.513906	TGTTTCTTCACATATCAACCAATAAGA	57.486	29.630	0.00	0.00	0.00	2.10
777	911	9.139174	CGGTGCATTAACTTTTATCTCATTTTT	57.861	29.630	0.00	0.00	0.00	1.94
778	912	7.275560	GCGGTGCATTAACTTTTATCTCATTTT	59.724	33.333	0.00	0.00	0.00	1.82
780	914	6.265577	GCGGTGCATTAACTTTTATCTCATT	58.734	36.000	0.00	0.00	0.00	2.57
781	915	5.504010	CGCGGTGCATTAACTTTTATCTCAT	60.504	40.000	0.00	0.00	0.00	2.90
782	916	4.201773	CGCGGTGCATTAACTTTTATCTCA	60.202	41.667	0.00	0.00	0.00	3.27
783	917	4.271687	CGCGGTGCATTAACTTTTATCTC	58.728	43.478	0.00	0.00	0.00	2.75
785	919	2.781646	GCGCGGTGCATTAACTTTTATC	59.218	45.455	8.83	0.00	45.45	1.75
786	920	2.792749	GCGCGGTGCATTAACTTTTAT	58.207	42.857	8.83	0.00	45.45	1.40
787	921	2.250348	GCGCGGTGCATTAACTTTTA	57.750	45.000	8.83	0.00	45.45	1.52
788	922	3.101019	GCGCGGTGCATTAACTTTT	57.899	47.368	8.83	0.00	45.45	2.27
798	932	0.730840	AAAATACTAAGGCGCGGTGC	59.269	50.000	8.83	4.64	45.38	5.01
799	933	1.735571	ACAAAATACTAAGGCGCGGTG	59.264	47.619	8.83	0.00	0.00	4.94
800	934	1.735571	CACAAAATACTAAGGCGCGGT	59.264	47.619	8.83	0.00	0.00	5.68
801	935	2.004017	TCACAAAATACTAAGGCGCGG	58.996	47.619	8.83	0.00	0.00	6.46
802	936	3.944422	ATCACAAAATACTAAGGCGCG	57.056	42.857	0.00	0.00	0.00	6.86
803	937	7.167468	CCAAATAATCACAAAATACTAAGGCGC	59.833	37.037	0.00	0.00	0.00	6.53
804	938	8.188139	ACCAAATAATCACAAAATACTAAGGCG	58.812	33.333	0.00	0.00	0.00	5.52
805	939	9.869757	AACCAAATAATCACAAAATACTAAGGC	57.130	29.630	0.00	0.00	0.00	4.35
810	944	9.974980	ACGAAAACCAAATAATCACAAAATACT	57.025	25.926	0.00	0.00	0.00	2.12
816	950	9.619316	CATCTTACGAAAACCAAATAATCACAA	57.381	29.630	0.00	0.00	0.00	3.33
817	951	9.004717	TCATCTTACGAAAACCAAATAATCACA	57.995	29.630	0.00	0.00	0.00	3.58
836	970	5.066117	CGCTCTAGGTGTGTAAGTCATCTTA	59.934	44.000	0.00	0.00	35.36	2.10
837	971	4.142359	CGCTCTAGGTGTGTAAGTCATCTT	60.142	45.833	0.00	0.00	37.65	2.40
838	972	3.378742	CGCTCTAGGTGTGTAAGTCATCT	59.621	47.826	0.00	0.00	0.00	2.90
839	973	3.489398	CCGCTCTAGGTGTGTAAGTCATC	60.489	52.174	0.00	0.00	0.00	2.92
840	974	2.427453	CCGCTCTAGGTGTGTAAGTCAT	59.573	50.000	0.00	0.00	0.00	3.06
841	975	1.816835	CCGCTCTAGGTGTGTAAGTCA	59.183	52.381	0.00	0.00	0.00	3.41
842	976	2.089980	TCCGCTCTAGGTGTGTAAGTC	58.910	52.381	0.00	0.00	0.00	3.01
843	977	2.093106	CTCCGCTCTAGGTGTGTAAGT	58.907	52.381	0.00	0.00	0.00	2.24
844	978	1.405821	CCTCCGCTCTAGGTGTGTAAG	59.594	57.143	0.00	0.00	0.00	2.34
845	979	1.471119	CCTCCGCTCTAGGTGTGTAA	58.529	55.000	0.00	0.00	0.00	2.41
846	980	0.395311	CCCTCCGCTCTAGGTGTGTA	60.395	60.000	0.00	0.00	31.70	2.90
847	981	1.682684	CCCTCCGCTCTAGGTGTGT	60.683	63.158	0.00	0.00	31.70	3.72
848	982	1.379977	TCCCTCCGCTCTAGGTGTG	60.380	63.158	0.00	0.00	31.70	3.82
849	983	1.076632	CTCCCTCCGCTCTAGGTGT	60.077	63.158	0.00	0.00	31.70	4.16
850	984	0.183014	TACTCCCTCCGCTCTAGGTG	59.817	60.000	0.00	0.00	31.70	4.00
851	985	0.475044	CTACTCCCTCCGCTCTAGGT	59.525	60.000	0.00	0.00	31.70	3.08
852	986	0.891904	GCTACTCCCTCCGCTCTAGG	60.892	65.000	0.00	0.00	0.00	3.02
853	987	0.109723	AGCTACTCCCTCCGCTCTAG	59.890	60.000	0.00	0.00	0.00	2.43
854	988	1.072015	GTAGCTACTCCCTCCGCTCTA	59.928	57.143	16.88	0.00	34.14	2.43
855	989	0.179012	GTAGCTACTCCCTCCGCTCT	60.179	60.000	16.88	0.00	34.14	4.09
856	990	0.465824	TGTAGCTACTCCCTCCGCTC	60.466	60.000	23.84	0.00	34.14	5.03
857	991	0.752376	GTGTAGCTACTCCCTCCGCT	60.752	60.000	23.84	0.00	36.56	5.52
858	992	1.734748	GTGTAGCTACTCCCTCCGC	59.265	63.158	23.84	0.00	0.00	5.54
859	993	0.106619	AGGTGTAGCTACTCCCTCCG	60.107	60.000	31.77	0.00	39.92	4.63
860	994	1.694844	GAGGTGTAGCTACTCCCTCC	58.305	60.000	32.15	22.56	39.92	4.30
861	995	1.694844	GGAGGTGTAGCTACTCCCTC	58.305	60.000	33.24	33.24	43.93	4.30
862	996	3.928885	GGAGGTGTAGCTACTCCCT	57.071	57.895	31.77	28.87	43.93	4.20
865	999	4.017808	TCTTGAAGGAGGTGTAGCTACTC	58.982	47.826	23.84	19.80	0.00	2.59
866	1000	4.048970	TCTTGAAGGAGGTGTAGCTACT	57.951	45.455	23.84	4.56	0.00	2.57
867	1001	4.382147	CCTTCTTGAAGGAGGTGTAGCTAC	60.382	50.000	21.34	17.30	42.62	3.58
903	1037	5.712152	AATTTGGTCTCAGGTTGAACATC	57.288	39.130	0.00	0.00	30.65	3.06
953	1087	7.093992	AGGAATTTGAAGTTAAGAGAGAGACG	58.906	38.462	0.00	0.00	0.00	4.18
999	1135	0.393402	CTGCTGTCCTGCCTTGCATA	60.393	55.000	0.00	0.00	38.13	3.14
1221	1366	1.529948	ATTGCCATGCCTCATCCCG	60.530	57.895	0.00	0.00	0.00	5.14
1233	1378	1.299648	CTCCGTCCTTCCATTGCCA	59.700	57.895	0.00	0.00	0.00	4.92
1335	1510	0.608640	ACTGCCCCTTGTAAGACGAG	59.391	55.000	0.00	0.00	0.00	4.18
1466	1650	0.666577	GACGTAGCTGTTGCCGTTCT	60.667	55.000	0.00	0.00	37.25	3.01
1467	1651	1.779683	GACGTAGCTGTTGCCGTTC	59.220	57.895	0.00	0.00	37.25	3.95
1819	2079	0.531753	GAGGGCCTCTTCTTCATCGC	60.532	60.000	26.44	0.00	0.00	4.58
1956	2231	3.243805	CGTACTCCCTCTCGAGTATCTGA	60.244	52.174	13.13	2.88	44.88	3.27
2172	2447	6.075205	CGACAACTAATTACTAATTCCGGACG	60.075	42.308	1.83	0.00	32.38	4.79
2209	2484	6.873605	TCAAACGGATGTATCTAGCATTATGG	59.126	38.462	0.00	0.00	0.00	2.74
2210	2485	7.412346	GCTCAAACGGATGTATCTAGCATTATG	60.412	40.741	0.00	0.00	0.00	1.90
2211	2486	6.591834	GCTCAAACGGATGTATCTAGCATTAT	59.408	38.462	0.00	0.00	0.00	1.28
2214	2489	4.202253	TGCTCAAACGGATGTATCTAGCAT	60.202	41.667	0.00	0.00	32.88	3.79
2216	2491	3.717707	TGCTCAAACGGATGTATCTAGC	58.282	45.455	0.00	0.00	0.00	3.42
2217	2492	5.109210	TGTTGCTCAAACGGATGTATCTAG	58.891	41.667	0.00	0.00	42.10	2.43
2220	2495	4.678509	TTGTTGCTCAAACGGATGTATC	57.321	40.909	0.00	0.00	42.10	2.24
2250	2525	8.359642	TGTTGAAAATTAAGATTCCCTCAGTTG	58.640	33.333	1.78	0.00	0.00	3.16
2254	2529	8.477419	AACTGTTGAAAATTAAGATTCCCTCA	57.523	30.769	0.00	0.00	0.00	3.86
2256	2531	8.367911	GGAAACTGTTGAAAATTAAGATTCCCT	58.632	33.333	0.00	0.00	33.49	4.20
2284	2569	7.327151	CTTCATAGCTCACAGCGATGTAGATC	61.327	46.154	5.75	2.56	46.51	2.75
2285	2570	5.564455	CTTCATAGCTCACAGCGATGTAGAT	60.564	44.000	5.75	6.15	46.51	1.98
2358	2647	6.306987	ACAACCACATTCAACCTTAGAAGAT	58.693	36.000	0.00	0.00	0.00	2.40
2442	2734	8.792633	CCATGTCTAATCCTTTAACAAACTCAA	58.207	33.333	0.00	0.00	0.00	3.02
2443	2735	7.393234	CCCATGTCTAATCCTTTAACAAACTCA	59.607	37.037	0.00	0.00	0.00	3.41
2444	2736	7.610305	TCCCATGTCTAATCCTTTAACAAACTC	59.390	37.037	0.00	0.00	0.00	3.01
2452	2744	9.713684	AATCAATTTCCCATGTCTAATCCTTTA	57.286	29.630	0.00	0.00	0.00	1.85
2454	2746	8.480501	CAAATCAATTTCCCATGTCTAATCCTT	58.519	33.333	0.00	0.00	0.00	3.36
2455	2747	7.840716	TCAAATCAATTTCCCATGTCTAATCCT	59.159	33.333	0.00	0.00	0.00	3.24
2469	2761	6.095377	AGGAATGCGAGTTCAAATCAATTTC	58.905	36.000	0.00	0.00	0.00	2.17
2480	2772	3.308530	CCAAACAAAGGAATGCGAGTTC	58.691	45.455	0.00	0.00	0.00	3.01
2486	2778	2.481185	CACATGCCAAACAAAGGAATGC	59.519	45.455	0.05	0.00	44.72	3.56
2525	2817	7.558081	AGGGGCAGTTAATTCTCTTCTAAATTC	59.442	37.037	0.00	0.00	0.00	2.17
2532	2824	8.747538	TTAAATAGGGGCAGTTAATTCTCTTC	57.252	34.615	0.00	0.00	0.00	2.87
2533	2825	9.715119	AATTAAATAGGGGCAGTTAATTCTCTT	57.285	29.630	0.00	0.00	33.11	2.85
2576	2868	5.641709	TGCACGTTGAAAGTTGTTTATTCA	58.358	33.333	0.00	0.00	0.00	2.57
2614	4797	1.529865	GTTCTGTTAGTTGGCACGTCC	59.470	52.381	0.00	0.00	0.00	4.79
2645	4828	2.024369	ACTGGGGATTGGGAATTGGTAC	60.024	50.000	0.00	0.00	0.00	3.34
2680	4863	1.134371	CGAATCTCTTCCTTGGGGGAC	60.134	57.143	0.00	0.00	45.03	4.46
2681	4864	1.204146	CGAATCTCTTCCTTGGGGGA	58.796	55.000	0.00	0.00	43.41	4.81
2687	4870	4.323104	CCAACTCCTTCGAATCTCTTCCTT	60.323	45.833	0.00	0.00	0.00	3.36
2688	4871	3.196685	CCAACTCCTTCGAATCTCTTCCT	59.803	47.826	0.00	0.00	0.00	3.36
2700	4883	4.700692	GGAATTAACTGGTCCAACTCCTTC	59.299	45.833	0.00	0.00	0.00	3.46
2709	4892	3.371702	GGGGAAGAGGAATTAACTGGTCC	60.372	52.174	0.00	0.00	0.00	4.46
2714	4897	3.528078	GGGAAGGGGAAGAGGAATTAACT	59.472	47.826	0.00	0.00	0.00	2.24
2715	4898	3.528078	AGGGAAGGGGAAGAGGAATTAAC	59.472	47.826	0.00	0.00	0.00	2.01
2767	4950	4.351111	AGGTAAGTGACACTTTCAATCCCT	59.649	41.667	25.10	16.40	39.51	4.20
2774	4957	6.204301	GGGAGTTTAAGGTAAGTGACACTTTC	59.796	42.308	25.10	19.52	39.51	2.62
2798	4981	1.065126	GGAGTTGGAGACAGGGAATGG	60.065	57.143	0.00	0.00	44.54	3.16
2801	4984	0.840722	GGGGAGTTGGAGACAGGGAA	60.841	60.000	0.00	0.00	44.54	3.97
2826	5009	2.159448	TGAAACCTTGACAGCGTGTTTG	60.159	45.455	0.00	0.00	29.89	2.93
2830	5013	3.354089	AAATGAAACCTTGACAGCGTG	57.646	42.857	0.00	0.00	0.00	5.34
2831	5014	4.556699	GCTAAAATGAAACCTTGACAGCGT	60.557	41.667	0.00	0.00	0.00	5.07
2832	5015	3.914364	GCTAAAATGAAACCTTGACAGCG	59.086	43.478	0.00	0.00	0.00	5.18
2833	5016	5.126396	AGCTAAAATGAAACCTTGACAGC	57.874	39.130	0.00	0.00	0.00	4.40
2834	5017	7.672983	TCTAGCTAAAATGAAACCTTGACAG	57.327	36.000	0.00	0.00	0.00	3.51
2835	5018	8.103305	AGATCTAGCTAAAATGAAACCTTGACA	58.897	33.333	0.00	0.00	0.00	3.58
2836	5019	8.499403	AGATCTAGCTAAAATGAAACCTTGAC	57.501	34.615	0.00	0.00	0.00	3.18
2837	5020	8.321353	TGAGATCTAGCTAAAATGAAACCTTGA	58.679	33.333	0.00	0.00	0.00	3.02
2838	5021	8.498054	TGAGATCTAGCTAAAATGAAACCTTG	57.502	34.615	0.00	0.00	0.00	3.61
2839	5022	8.325046	ACTGAGATCTAGCTAAAATGAAACCTT	58.675	33.333	0.00	0.00	0.00	3.50
2840	5023	7.856415	ACTGAGATCTAGCTAAAATGAAACCT	58.144	34.615	0.00	0.00	0.00	3.50
2841	5024	7.766278	TGACTGAGATCTAGCTAAAATGAAACC	59.234	37.037	0.00	0.00	0.00	3.27
2842	5025	8.709386	TGACTGAGATCTAGCTAAAATGAAAC	57.291	34.615	0.00	0.00	0.00	2.78
2843	5026	7.493971	GCTGACTGAGATCTAGCTAAAATGAAA	59.506	37.037	7.11	0.00	0.00	2.69
2844	5027	6.983307	GCTGACTGAGATCTAGCTAAAATGAA	59.017	38.462	7.11	0.00	0.00	2.57
2900	5083	2.380064	AAGCACAATCCAAGGGTCAA	57.620	45.000	0.00	0.00	0.00	3.18
2986	5173	4.642429	ACTGACCCAAAGTAGATGTCAAC	58.358	43.478	0.00	0.00	35.70	3.18
2993	5180	4.884668	AAATCGACTGACCCAAAGTAGA	57.115	40.909	0.00	0.00	34.43	2.59
2997	5184	5.438761	AAAGAAAATCGACTGACCCAAAG	57.561	39.130	0.00	0.00	0.00	2.77
3019	5206	1.415659	CACACCAAAATCCAGCCCAAA	59.584	47.619	0.00	0.00	0.00	3.28
3124	5325	5.412594	ACGCACTCAACATCTGAAAATACAT	59.587	36.000	0.00	0.00	32.17	2.29
3794	6352	7.869429	ACTTGCGTGTATACTTACTTACAAACT	59.131	33.333	4.17	0.00	30.59	2.66
4408	6981	8.768501	AGATTGAAACCCTTTAAGAAGAAAGT	57.231	30.769	0.00	0.00	35.08	2.66
4638	7214	3.892588	AGCAATTCTCCGGTAAAAACCAA	59.107	39.130	0.00	0.00	0.00	3.67
4809	7403	1.880796	CAGTCGAACGGCACACACA	60.881	57.895	1.04	0.00	0.00	3.72
4869	7463	1.000717	CGCCTGGTAACCAAAACCTTG	60.001	52.381	0.00	0.00	37.91	3.61
4870	7464	1.324383	CGCCTGGTAACCAAAACCTT	58.676	50.000	0.00	0.00	37.91	3.50
4905	7499	2.548067	CCGAGATGTATGGTTACTGGGC	60.548	54.545	0.00	0.00	0.00	5.36
4909	7503	1.269621	GCGCCGAGATGTATGGTTACT	60.270	52.381	0.00	0.00	0.00	2.24
4916	7510	2.842462	TGGGGCGCCGAGATGTAT	60.842	61.111	22.54	0.00	0.00	2.29
4917	7511	3.845259	GTGGGGCGCCGAGATGTA	61.845	66.667	22.54	0.00	0.00	2.29
5019	7619	1.314730	CGGGCAGTTACCAAACAGTT	58.685	50.000	0.00	0.00	38.12	3.16
5020	7620	0.536460	CCGGGCAGTTACCAAACAGT	60.536	55.000	0.00	0.00	38.12	3.55
5021	7621	0.536460	ACCGGGCAGTTACCAAACAG	60.536	55.000	6.32	0.00	38.12	3.16
5023	7623	2.118313	ATACCGGGCAGTTACCAAAC	57.882	50.000	6.32	0.00	35.72	2.93
5026	7626	2.306512	AGAAAATACCGGGCAGTTACCA	59.693	45.455	6.32	0.00	0.00	3.25
5028	7628	2.681344	CCAGAAAATACCGGGCAGTTAC	59.319	50.000	6.32	0.00	0.00	2.50
5541	8150	1.229428	AGAACACATGCTGACCAACG	58.771	50.000	0.00	0.00	0.00	4.10
5561	8176	8.572855	AACACATTTTTGGAAAAGGAATGAAA	57.427	26.923	5.01	0.00	0.00	2.69
5562	8177	8.046107	AGAACACATTTTTGGAAAAGGAATGAA	58.954	29.630	5.01	0.00	0.00	2.57
5563	8178	7.563906	AGAACACATTTTTGGAAAAGGAATGA	58.436	30.769	5.01	0.00	0.00	2.57
5564	8179	7.790823	AGAACACATTTTTGGAAAAGGAATG	57.209	32.000	5.01	0.00	0.00	2.67
5565	8180	8.806429	AAAGAACACATTTTTGGAAAAGGAAT	57.194	26.923	5.01	0.00	0.00	3.01
5566	8181	8.628630	AAAAGAACACATTTTTGGAAAAGGAA	57.371	26.923	5.01	0.00	0.00	3.36
6200	9094	3.364366	GGACAAGTTTGATTCGAGTGCTG	60.364	47.826	0.00	0.00	0.00	4.41
6259	9153	5.108187	AGAACCTGCATCATGTCAAGTAT	57.892	39.130	0.00	0.00	0.00	2.12
6425	9360	7.716612	AGCTCAAGCAACAGTTAACTATTTTT	58.283	30.769	8.04	0.00	45.16	1.94
6428	9363	5.412904	GGAGCTCAAGCAACAGTTAACTATT	59.587	40.000	17.19	0.00	45.16	1.73
6430	9365	4.315803	GGAGCTCAAGCAACAGTTAACTA	58.684	43.478	17.19	0.00	45.16	2.24
6431	9366	3.142174	GGAGCTCAAGCAACAGTTAACT	58.858	45.455	17.19	1.12	45.16	2.24
6432	9367	2.226674	GGGAGCTCAAGCAACAGTTAAC	59.773	50.000	17.19	0.00	45.16	2.01
6675	9623	3.924144	AGCTTTAGACAGTCTCTGCAAG	58.076	45.455	6.27	6.82	34.37	4.01
6713	9662	5.200483	AGATTGAAGGAAATTAATCCGCCA	58.800	37.500	0.00	0.00	44.60	5.69
6760	9712	9.207868	AGAAGTAGCTAGAGTAGGAAAAATCAT	57.792	33.333	0.00	0.00	0.00	2.45
6781	9733	9.136323	AGTTTCTACCATCATTTGAAAAGAAGT	57.864	29.630	0.00	0.00	0.00	3.01
7110	10094	2.128035	CGATTTCGATCTGCCTACACC	58.872	52.381	0.00	0.00	43.02	4.16
7123	10107	3.641439	AGAAATTCGCTGTCGATTTCG	57.359	42.857	0.00	0.00	45.04	3.46
7198	10182	6.469410	TGATCCTATTTGTAGGTTTTGACGT	58.531	36.000	0.00	0.00	38.38	4.34
7361	10366	1.499056	GCGGCATCTGCATTATCGG	59.501	57.895	4.33	0.00	44.36	4.18
7935	10980	4.993705	TTCTAGCCAAAGAGGAGGAAAA	57.006	40.909	0.00	0.00	41.22	2.29
7972	11020	5.739935	GCAAACACACTTCATTGGATTTCCT	60.740	40.000	0.00	0.00	36.82	3.36
8004	11053	1.961133	AGTATTTTGGGACGGAGGGA	58.039	50.000	0.00	0.00	0.00	4.20
8005	11054	2.290705	ACAAGTATTTTGGGACGGAGGG	60.291	50.000	0.00	0.00	0.00	4.30
8006	11055	3.007635	GACAAGTATTTTGGGACGGAGG	58.992	50.000	0.00	0.00	0.00	4.30
8007	11056	2.671396	CGACAAGTATTTTGGGACGGAG	59.329	50.000	0.00	0.00	0.00	4.63
8008	11057	2.613474	CCGACAAGTATTTTGGGACGGA	60.613	50.000	0.00	0.00	37.12	4.69
8009	11058	1.735571	CCGACAAGTATTTTGGGACGG	59.264	52.381	0.00	0.00	0.00	4.79
8010	11059	2.671396	CTCCGACAAGTATTTTGGGACG	59.329	50.000	0.00	0.00	0.00	4.79
8011	11060	3.007635	CCTCCGACAAGTATTTTGGGAC	58.992	50.000	0.00	0.00	0.00	4.46
8012	11061	2.907696	TCCTCCGACAAGTATTTTGGGA	59.092	45.455	0.00	0.00	0.00	4.37
8013	11062	3.343941	TCCTCCGACAAGTATTTTGGG	57.656	47.619	0.00	0.00	0.00	4.12
8014	11063	4.096382	CCATTCCTCCGACAAGTATTTTGG	59.904	45.833	0.00	0.00	0.00	3.28
8015	11064	4.941263	TCCATTCCTCCGACAAGTATTTTG	59.059	41.667	0.00	0.00	0.00	2.44
8016	11065	5.174037	TCCATTCCTCCGACAAGTATTTT	57.826	39.130	0.00	0.00	0.00	1.82
8017	11066	4.837093	TCCATTCCTCCGACAAGTATTT	57.163	40.909	0.00	0.00	0.00	1.40
8018	11067	4.164221	ACATCCATTCCTCCGACAAGTATT	59.836	41.667	0.00	0.00	0.00	1.89
8019	11068	3.711704	ACATCCATTCCTCCGACAAGTAT	59.288	43.478	0.00	0.00	0.00	2.12
8020	11069	3.104512	ACATCCATTCCTCCGACAAGTA	58.895	45.455	0.00	0.00	0.00	2.24
8021	11070	1.909302	ACATCCATTCCTCCGACAAGT	59.091	47.619	0.00	0.00	0.00	3.16
8022	11071	2.698855	ACATCCATTCCTCCGACAAG	57.301	50.000	0.00	0.00	0.00	3.16
8023	11072	3.967326	AGATACATCCATTCCTCCGACAA	59.033	43.478	0.00	0.00	0.00	3.18
8024	11073	3.576861	AGATACATCCATTCCTCCGACA	58.423	45.455	0.00	0.00	0.00	4.35
8025	11074	5.010933	TCTAGATACATCCATTCCTCCGAC	58.989	45.833	0.00	0.00	0.00	4.79
8026	11075	5.010933	GTCTAGATACATCCATTCCTCCGA	58.989	45.833	0.00	0.00	0.00	4.55
8027	11076	4.142578	CGTCTAGATACATCCATTCCTCCG	60.143	50.000	0.00	0.00	0.00	4.63
8028	11077	4.767928	ACGTCTAGATACATCCATTCCTCC	59.232	45.833	0.00	0.00	0.00	4.30
8029	11078	5.968528	ACGTCTAGATACATCCATTCCTC	57.031	43.478	0.00	0.00	0.00	3.71
8030	11079	8.423906	AAATACGTCTAGATACATCCATTCCT	57.576	34.615	0.00	0.00	0.00	3.36
8063	11112	9.807649	GAGAAATGCATAAAAATTGATGTACCT	57.192	29.630	0.00	0.00	0.00	3.08
8064	11113	9.034544	GGAGAAATGCATAAAAATTGATGTACC	57.965	33.333	0.00	0.00	0.00	3.34
8065	11114	8.745837	CGGAGAAATGCATAAAAATTGATGTAC	58.254	33.333	0.00	0.00	0.00	2.90
8066	11115	8.681806	TCGGAGAAATGCATAAAAATTGATGTA	58.318	29.630	0.00	0.00	0.00	2.29
8067	11116	7.489113	GTCGGAGAAATGCATAAAAATTGATGT	59.511	33.333	0.00	0.00	39.69	3.06
8068	11117	7.305590	CGTCGGAGAAATGCATAAAAATTGATG	60.306	37.037	0.00	0.00	39.69	3.07
8069	11118	6.692681	CGTCGGAGAAATGCATAAAAATTGAT	59.307	34.615	0.00	0.00	39.69	2.57
8070	11119	6.027131	CGTCGGAGAAATGCATAAAAATTGA	58.973	36.000	0.00	0.00	39.69	2.57
8071	11120	6.027131	TCGTCGGAGAAATGCATAAAAATTG	58.973	36.000	0.00	0.00	39.69	2.32
8072	11121	6.128007	ACTCGTCGGAGAAATGCATAAAAATT	60.128	34.615	0.00	0.00	43.27	1.82
8073	11122	5.354234	ACTCGTCGGAGAAATGCATAAAAAT	59.646	36.000	0.00	0.00	43.27	1.82
8074	11123	4.693566	ACTCGTCGGAGAAATGCATAAAAA	59.306	37.500	0.00	0.00	43.27	1.94
8075	11124	4.250464	ACTCGTCGGAGAAATGCATAAAA	58.750	39.130	0.00	0.00	43.27	1.52
8076	11125	3.857052	ACTCGTCGGAGAAATGCATAAA	58.143	40.909	0.00	0.00	43.27	1.40
8077	11126	3.520290	ACTCGTCGGAGAAATGCATAA	57.480	42.857	0.00	0.00	43.27	1.90
8078	11127	4.848562	ATACTCGTCGGAGAAATGCATA	57.151	40.909	0.00	0.00	43.27	3.14
8079	11128	3.735237	ATACTCGTCGGAGAAATGCAT	57.265	42.857	0.00	0.00	43.27	3.96
8080	11129	3.520290	AATACTCGTCGGAGAAATGCA	57.480	42.857	0.00	0.00	43.27	3.96
8081	11130	3.245519	GGAAATACTCGTCGGAGAAATGC	59.754	47.826	0.00	0.00	43.27	3.56
8082	11131	3.486108	CGGAAATACTCGTCGGAGAAATG	59.514	47.826	0.00	0.00	43.27	2.32
8083	11132	3.490419	CCGGAAATACTCGTCGGAGAAAT	60.490	47.826	0.00	0.00	43.27	2.17
8084	11133	2.159338	CCGGAAATACTCGTCGGAGAAA	60.159	50.000	0.00	0.00	43.27	2.52
8085	11134	1.402968	CCGGAAATACTCGTCGGAGAA	59.597	52.381	0.00	0.00	43.27	2.87
8086	11135	1.019673	CCGGAAATACTCGTCGGAGA	58.980	55.000	0.00	0.00	43.27	3.71
8087	11136	1.019673	TCCGGAAATACTCGTCGGAG	58.980	55.000	0.00	0.00	43.84	4.63
8088	11137	0.734889	GTCCGGAAATACTCGTCGGA	59.265	55.000	5.23	0.00	46.06	4.55
8089	11138	0.590732	CGTCCGGAAATACTCGTCGG	60.591	60.000	5.23	0.00	41.80	4.79
8090	11139	0.590732	CCGTCCGGAAATACTCGTCG	60.591	60.000	5.23	1.25	37.50	5.12
8091	11140	0.734889	TCCGTCCGGAAATACTCGTC	59.265	55.000	5.23	0.00	42.05	4.20
8092	11141	0.737219	CTCCGTCCGGAAATACTCGT	59.263	55.000	5.23	0.00	44.66	4.18
8093	11142	0.030369	CCTCCGTCCGGAAATACTCG	59.970	60.000	5.23	3.90	44.66	4.18
8094	11143	0.388294	CCCTCCGTCCGGAAATACTC	59.612	60.000	5.23	0.00	44.66	2.59
8095	11144	0.032813	TCCCTCCGTCCGGAAATACT	60.033	55.000	5.23	0.00	44.66	2.12
8096	11145	0.388294	CTCCCTCCGTCCGGAAATAC	59.612	60.000	5.23	0.00	44.66	1.89
8097	11146	0.032813	ACTCCCTCCGTCCGGAAATA	60.033	55.000	5.23	0.00	44.66	1.40
8098	11147	0.032813	TACTCCCTCCGTCCGGAAAT	60.033	55.000	5.23	0.00	44.66	2.17
8099	11148	0.967380	GTACTCCCTCCGTCCGGAAA	60.967	60.000	5.23	0.00	44.66	3.13
8100	11149	1.379044	GTACTCCCTCCGTCCGGAA	60.379	63.158	5.23	0.00	44.66	4.30
8101	11150	1.929860	ATGTACTCCCTCCGTCCGGA	61.930	60.000	0.00	0.00	42.90	5.14
8102	11151	1.041447	AATGTACTCCCTCCGTCCGG	61.041	60.000	0.00	0.00	0.00	5.14
8103	11152	1.683943	TAATGTACTCCCTCCGTCCG	58.316	55.000	0.00	0.00	0.00	4.79
8104	11153	4.344390	AGATTTAATGTACTCCCTCCGTCC	59.656	45.833	0.00	0.00	0.00	4.79
8132	11213	8.961092	GCTGCTTTTGACAAATACATATACATG	58.039	33.333	0.50	0.00	38.21	3.21
8157	11238	4.260948	GCTGATGCCTAGTTTTGTCTATGC	60.261	45.833	0.00	0.00	34.03	3.14
8262	11343	0.112995	AGGGTGCCAATGAGCAGAAA	59.887	50.000	0.00	0.00	45.14	2.52
8264	11345	1.300963	GAGGGTGCCAATGAGCAGA	59.699	57.895	0.00	0.00	45.14	4.26
8306	11390	0.892755	ATCCGGTGACAGCGACTAAA	59.107	50.000	27.42	8.29	42.41	1.85
8337	11422	2.224769	CCACCACCATTGTAGTCACCTT	60.225	50.000	0.00	0.00	0.00	3.50
8341	11426	1.628340	CCTCCACCACCATTGTAGTCA	59.372	52.381	0.00	0.00	0.00	3.41
8343	11428	1.742308	ACCTCCACCACCATTGTAGT	58.258	50.000	0.00	0.00	0.00	2.73
8389	11474	0.899720	AGCCAAAGCCACAATGATGG	59.100	50.000	0.00	0.00	43.26	3.51
8452	11538	3.753797	GACCAAAGCCCTCTTTTCTACTG	59.246	47.826	0.00	0.00	40.35	2.74
8595	11682	2.473760	CGTGGCACCAACCGAAACA	61.474	57.895	12.86	0.00	0.00	2.83
8598	11685	1.228003	ATTCGTGGCACCAACCGAA	60.228	52.632	12.86	14.94	38.27	4.30
8648	11735	2.825861	GACTAAAGGTCCACGAACCA	57.174	50.000	8.63	0.00	42.12	3.67
8675	11786	0.896923	TTAGTACCGGTTCGTGGCAT	59.103	50.000	15.04	0.00	0.00	4.40
8682	11793	3.011818	CAAACCCCATTAGTACCGGTTC	58.988	50.000	15.04	8.12	35.78	3.62
8862	11983	6.994421	AAATTTTCCCAACAACTAGACCAT	57.006	33.333	0.00	0.00	0.00	3.55

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.