Multiple sequence alignment - TraesCS2B01G502900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G502900 chr2B 100.000 2609 0 0 1 2609 697437914 697440522 0.000000e+00 4819.0
1 TraesCS2B01G502900 chr2B 90.156 1026 67 18 775 1774 697393989 697395006 0.000000e+00 1304.0
2 TraesCS2B01G502900 chr2B 90.146 1025 68 17 775 1774 697223603 697224619 0.000000e+00 1303.0
3 TraesCS2B01G502900 chr2B 90.146 1025 68 17 775 1774 697286380 697287396 0.000000e+00 1303.0
4 TraesCS2B01G502900 chr2B 90.058 1026 68 18 775 1774 697352229 697353246 0.000000e+00 1299.0
5 TraesCS2B01G502900 chr2B 90.049 1025 69 17 775 1774 697333912 697334928 0.000000e+00 1297.0
6 TraesCS2B01G502900 chr2B 90.333 931 59 16 867 1774 697370627 697371549 0.000000e+00 1192.0
7 TraesCS2B01G502900 chr2B 88.931 786 60 13 1247 2017 697007292 697008065 0.000000e+00 944.0
8 TraesCS2B01G502900 chr2B 93.790 467 26 1 888 1354 697138001 697138464 0.000000e+00 699.0
9 TraesCS2B01G502900 chr2B 92.072 391 20 3 775 1163 697006917 697007298 8.210000e-150 540.0
10 TraesCS2B01G502900 chr2B 86.207 406 36 10 1389 1774 697153258 697153663 3.100000e-114 422.0
11 TraesCS2B01G502900 chr2B 84.104 346 28 9 1 336 87501738 87501410 2.520000e-80 309.0
12 TraesCS2B01G502900 chr2B 91.071 224 17 3 1796 2017 697138677 697138899 1.520000e-77 300.0
13 TraesCS2B01G502900 chr2B 90.816 196 16 2 1786 1980 697395047 697395241 7.160000e-66 261.0
14 TraesCS2B01G502900 chr2B 90.306 196 17 2 1786 1980 697224660 697224854 3.330000e-64 255.0
15 TraesCS2B01G502900 chr2B 90.306 196 17 2 1786 1980 697287437 697287631 3.330000e-64 255.0
16 TraesCS2B01G502900 chr2B 90.306 196 17 2 1786 1980 697334969 697335163 3.330000e-64 255.0
17 TraesCS2B01G502900 chr2B 90.306 196 17 2 1786 1980 697353287 697353481 3.330000e-64 255.0
18 TraesCS2B01G502900 chr2B 92.667 150 10 1 1786 1935 697153704 697153852 5.660000e-52 215.0
19 TraesCS2B01G502900 chr2B 93.617 141 8 1 1786 1926 697371590 697371729 2.630000e-50 209.0
20 TraesCS2B01G502900 chr2B 90.370 135 8 4 2480 2609 247942597 247942731 3.450000e-39 172.0
21 TraesCS2B01G502900 chr1B 92.105 646 30 6 1 645 130939802 130940427 0.000000e+00 891.0
22 TraesCS2B01G502900 chr1B 94.077 574 24 3 1 573 223858439 223859003 0.000000e+00 863.0
23 TraesCS2B01G502900 chr1B 89.079 467 50 1 2015 2480 169651292 169651758 1.740000e-161 579.0
24 TraesCS2B01G502900 chr1B 83.984 256 22 9 1 246 143608637 143608391 7.260000e-56 228.0
25 TraesCS2B01G502900 chr1B 83.268 257 22 8 1 246 142525836 142525590 1.570000e-52 217.0
26 TraesCS2B01G502900 chr1B 83.268 257 22 8 1 246 321699292 321699538 1.570000e-52 217.0
27 TraesCS2B01G502900 chr2D 85.938 832 58 27 775 1604 579514983 579515757 0.000000e+00 833.0
28 TraesCS2B01G502900 chr2D 84.766 256 20 5 1 246 532467930 532467684 3.360000e-59 239.0
29 TraesCS2B01G502900 chr2D 91.111 135 8 2 2479 2609 2763339 2763205 2.060000e-41 180.0
30 TraesCS2B01G502900 chr2D 76.897 290 59 6 1238 1522 585079034 585079320 9.670000e-35 158.0
31 TraesCS2B01G502900 chr2D 81.765 170 16 10 342 504 330858766 330858927 7.580000e-26 128.0
32 TraesCS2B01G502900 chr2D 91.803 61 1 4 717 775 579514894 579514952 5.980000e-12 82.4
33 TraesCS2B01G502900 chr2A 86.099 669 56 24 1247 1883 717167698 717168361 0.000000e+00 686.0
34 TraesCS2B01G502900 chr2A 84.410 449 36 14 717 1161 717167285 717167703 6.720000e-111 411.0
35 TraesCS2B01G502900 chr2A 84.483 348 33 7 1 336 166780273 166780611 9.010000e-85 324.0
36 TraesCS2B01G502900 chr2A 89.552 134 10 3 2480 2609 528895298 528895431 1.610000e-37 167.0
37 TraesCS2B01G502900 chr6D 90.302 464 44 1 2017 2480 33295625 33295163 7.990000e-170 606.0
38 TraesCS2B01G502900 chr6D 83.607 305 32 7 42 336 20479899 20479603 1.190000e-68 270.0
39 TraesCS2B01G502900 chr7D 89.744 468 45 3 2016 2480 57791613 57792080 1.730000e-166 595.0
40 TraesCS2B01G502900 chr5B 89.677 465 47 1 2017 2480 658178756 658179220 2.240000e-165 592.0
41 TraesCS2B01G502900 chr5B 89.462 465 48 1 2017 2480 425113436 425112972 1.040000e-163 586.0
42 TraesCS2B01G502900 chr5B 84.047 257 20 8 1 246 108834607 108834361 7.260000e-56 228.0
43 TraesCS2B01G502900 chr5B 91.045 134 8 4 2480 2609 577222484 577222617 7.420000e-41 178.0
44 TraesCS2B01G502900 chr6B 89.339 469 48 2 2014 2480 68753224 68752756 2.890000e-164 588.0
45 TraesCS2B01G502900 chr6B 89.462 465 48 1 2017 2480 561640526 561640990 1.040000e-163 586.0
46 TraesCS2B01G502900 chr6B 81.781 247 26 9 54 289 560635438 560635200 3.430000e-44 189.0
47 TraesCS2B01G502900 chr6B 90.226 133 9 3 2481 2609 513887175 513887043 1.240000e-38 171.0
48 TraesCS2B01G502900 chr6B 83.908 174 17 10 400 567 430537958 430538126 3.480000e-34 156.0
49 TraesCS2B01G502900 chr5A 89.485 466 47 2 2017 2480 99023369 99022904 2.890000e-164 588.0
50 TraesCS2B01G502900 chr5A 82.353 85 13 2 544 627 615826541 615826458 3.600000e-09 73.1
51 TraesCS2B01G502900 chr3A 89.247 465 49 1 2017 2480 743535985 743535521 4.840000e-162 580.0
52 TraesCS2B01G502900 chr3A 84.262 305 29 7 42 336 736934476 736934771 1.980000e-71 279.0
53 TraesCS2B01G502900 chr3A 79.412 102 19 2 545 645 746218252 746218152 1.300000e-08 71.3
54 TraesCS2B01G502900 chr7B 82.410 307 33 11 42 336 606359367 606359070 5.580000e-62 248.0
55 TraesCS2B01G502900 chr7B 79.675 123 22 2 508 627 568426609 568426731 4.630000e-13 86.1
56 TraesCS2B01G502900 chr3D 85.156 256 19 5 1 246 570502453 570502699 7.210000e-61 244.0
57 TraesCS2B01G502900 chr3D 84.766 256 20 4 1 246 35709048 35708802 3.360000e-59 239.0
58 TraesCS2B01G502900 chr3D 82.609 230 29 9 342 567 578059432 578059654 2.650000e-45 193.0
59 TraesCS2B01G502900 chr3D 86.486 111 11 3 342 452 141513082 141512976 4.560000e-23 119.0
60 TraesCS2B01G502900 chrUn 83.594 256 23 4 1 246 40179814 40180060 3.380000e-54 222.0
61 TraesCS2B01G502900 chrUn 90.511 137 7 3 2479 2609 15950112 15949976 2.670000e-40 176.0
62 TraesCS2B01G502900 chrUn 88.971 136 11 3 2478 2609 35853943 35854078 5.780000e-37 165.0
63 TraesCS2B01G502900 chrUn 89.474 133 10 3 2481 2609 299961495 299961363 5.780000e-37 165.0
64 TraesCS2B01G502900 chr6A 83.594 256 23 4 1 246 53920512 53920266 3.380000e-54 222.0
65 TraesCS2B01G502900 chr4D 83.594 256 23 7 1 246 23912240 23912486 3.380000e-54 222.0
66 TraesCS2B01G502900 chr4D 86.916 107 11 2 346 452 15089235 15089338 1.640000e-22 117.0
67 TraesCS2B01G502900 chr7A 83.830 235 19 15 342 567 518160433 518160209 3.400000e-49 206.0
68 TraesCS2B01G502900 chr7A 83.333 174 18 9 400 567 246557402 246557234 1.620000e-32 150.0
69 TraesCS2B01G502900 chr5D 90.152 132 5 6 2481 2606 551126587 551126716 5.780000e-37 165.0
70 TraesCS2B01G502900 chr4A 83.908 174 17 9 400 567 137095094 137094926 3.480000e-34 156.0
71 TraesCS2B01G502900 chr4A 86.486 111 11 3 342 452 137095207 137095101 4.560000e-23 119.0
72 TraesCS2B01G502900 chr4B 83.140 172 22 6 400 567 223368095 223367927 1.620000e-32 150.0
73 TraesCS2B01G502900 chr4B 87.850 107 10 2 346 452 223368205 223368102 3.530000e-24 122.0
74 TraesCS2B01G502900 chr1A 80.159 126 17 6 508 627 544933818 544933941 1.290000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G502900 chr2B 697437914 697440522 2608 False 4819.0 4819 100.0000 1 2609 1 chr2B.!!$F2 2608
1 TraesCS2B01G502900 chr2B 697393989 697395241 1252 False 782.5 1304 90.4860 775 1980 2 chr2B.!!$F11 1205
2 TraesCS2B01G502900 chr2B 697223603 697224854 1251 False 779.0 1303 90.2260 775 1980 2 chr2B.!!$F6 1205
3 TraesCS2B01G502900 chr2B 697286380 697287631 1251 False 779.0 1303 90.2260 775 1980 2 chr2B.!!$F7 1205
4 TraesCS2B01G502900 chr2B 697352229 697353481 1252 False 777.0 1299 90.1820 775 1980 2 chr2B.!!$F9 1205
5 TraesCS2B01G502900 chr2B 697333912 697335163 1251 False 776.0 1297 90.1775 775 1980 2 chr2B.!!$F8 1205
6 TraesCS2B01G502900 chr2B 697006917 697008065 1148 False 742.0 944 90.5015 775 2017 2 chr2B.!!$F3 1242
7 TraesCS2B01G502900 chr2B 697370627 697371729 1102 False 700.5 1192 91.9750 867 1926 2 chr2B.!!$F10 1059
8 TraesCS2B01G502900 chr2B 697138001 697138899 898 False 499.5 699 92.4305 888 2017 2 chr2B.!!$F4 1129
9 TraesCS2B01G502900 chr2B 697153258 697153852 594 False 318.5 422 89.4370 1389 1935 2 chr2B.!!$F5 546
10 TraesCS2B01G502900 chr1B 130939802 130940427 625 False 891.0 891 92.1050 1 645 1 chr1B.!!$F1 644
11 TraesCS2B01G502900 chr1B 223858439 223859003 564 False 863.0 863 94.0770 1 573 1 chr1B.!!$F3 572
12 TraesCS2B01G502900 chr2D 579514894 579515757 863 False 457.7 833 88.8705 717 1604 2 chr2D.!!$F3 887
13 TraesCS2B01G502900 chr2A 717167285 717168361 1076 False 548.5 686 85.2545 717 1883 2 chr2A.!!$F3 1166

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
118 119 0.175989 GGGGATGAACTCACCGTCTC 59.824 60.0 0.0 0.0 37.81 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2052 2184 0.179054 ACTGCATGCATCGCTCAGAT 60.179 50.0 22.97 0.0 41.01 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
116 117 4.934989 GGGGATGAACTCACCGTC 57.065 61.111 0.00 0.00 37.81 4.79
117 118 2.287829 GGGGATGAACTCACCGTCT 58.712 57.895 0.00 0.00 37.81 4.18
118 119 0.175989 GGGGATGAACTCACCGTCTC 59.824 60.000 0.00 0.00 37.81 3.36
119 120 0.895530 GGGATGAACTCACCGTCTCA 59.104 55.000 0.00 0.00 0.00 3.27
120 121 1.404315 GGGATGAACTCACCGTCTCAC 60.404 57.143 0.00 0.00 0.00 3.51
121 122 1.404315 GGATGAACTCACCGTCTCACC 60.404 57.143 0.00 0.00 0.00 4.02
139 140 3.384532 CCATGGCCACCTGGTTGC 61.385 66.667 16.19 14.15 37.57 4.17
144 145 4.329545 GCCACCTGGTTGCGGAGA 62.330 66.667 7.18 0.00 37.57 3.71
471 481 4.273318 AGGCCAGTTTGGATAAGATGAAC 58.727 43.478 5.01 0.00 40.96 3.18
481 491 3.637229 GGATAAGATGAACGAGAGGGACA 59.363 47.826 0.00 0.00 0.00 4.02
549 560 5.757850 AGCGTTCTTTCAGAATTCACTTT 57.242 34.783 8.44 0.00 36.50 2.66
578 589 4.511826 GGACTGCGGGTTGAATATCTAAAG 59.488 45.833 0.00 0.00 0.00 1.85
588 599 6.183360 GGTTGAATATCTAAAGACACAAGGGC 60.183 42.308 0.00 0.00 0.00 5.19
601 612 2.160417 CACAAGGGCGTTTTTGCAAAAA 59.840 40.909 28.85 28.85 35.67 1.94
631 642 2.490903 ACGTACGACCAGAAGCACTAAT 59.509 45.455 24.41 0.00 0.00 1.73
777 820 2.009774 CCCGAAATCAATTCAGCTCGT 58.990 47.619 0.00 0.00 37.96 4.18
784 827 1.205655 TCAATTCAGCTCGTCTCCCAG 59.794 52.381 0.00 0.00 0.00 4.45
788 831 3.444805 AGCTCGTCTCCCAGTCGC 61.445 66.667 0.00 0.00 0.00 5.19
789 832 4.838486 GCTCGTCTCCCAGTCGCG 62.838 72.222 0.00 0.00 0.00 5.87
814 857 1.352156 CGACCGGAGCCGAAAAAGAG 61.352 60.000 9.46 0.00 42.83 2.85
1075 1126 1.660560 GCAGCATGGCGGTCAAGATT 61.661 55.000 0.00 0.00 35.86 2.40
1244 1298 3.474570 GCATGAGGAGGCTCCGGT 61.475 66.667 27.11 11.75 42.75 5.28
1250 1304 1.671901 GAGGAGGCTCCGGTGAGAAG 61.672 65.000 27.11 0.00 42.75 2.85
1506 1560 2.488820 GGCTACGTCGAGGTGGAC 59.511 66.667 23.45 18.09 0.00 4.02
1553 1607 3.935203 GAGATGGAAGCAATGAACGAAGA 59.065 43.478 0.00 0.00 0.00 2.87
1594 1648 3.407424 AAGGCTTTGATTTTTCAGGCC 57.593 42.857 0.00 0.00 39.13 5.19
1604 1658 0.973632 TTTTCAGGCCTGCTCGACTA 59.026 50.000 28.91 5.83 0.00 2.59
1609 1663 1.034838 AGGCCTGCTCGACTACTGAG 61.035 60.000 3.11 0.00 36.53 3.35
1613 1677 2.088423 CCTGCTCGACTACTGAGTTCT 58.912 52.381 0.00 0.00 35.45 3.01
1615 1679 2.744741 CTGCTCGACTACTGAGTTCTGA 59.255 50.000 0.00 0.00 35.45 3.27
1620 1691 3.119814 TCGACTACTGAGTTCTGACATGC 60.120 47.826 0.00 0.00 35.45 4.06
1632 1703 6.047870 AGTTCTGACATGCTGATTGTAGATC 58.952 40.000 0.00 0.00 0.00 2.75
1640 1713 3.805971 TGCTGATTGTAGATCGATTGCAG 59.194 43.478 0.00 1.58 31.41 4.41
1644 1717 6.110543 TGATTGTAGATCGATTGCAGTTTG 57.889 37.500 0.00 0.00 0.00 2.93
1653 1726 3.932710 TCGATTGCAGTTTGTCCAGTATC 59.067 43.478 0.00 0.00 0.00 2.24
1655 1728 4.436050 CGATTGCAGTTTGTCCAGTATCAC 60.436 45.833 0.00 0.00 0.00 3.06
1656 1729 3.483808 TGCAGTTTGTCCAGTATCACA 57.516 42.857 0.00 0.00 0.00 3.58
1657 1730 4.019792 TGCAGTTTGTCCAGTATCACAT 57.980 40.909 0.00 0.00 0.00 3.21
1699 1778 9.766277 GAATCAATGTAATGAGAACTCACTTTC 57.234 33.333 6.67 2.88 43.11 2.62
1728 1807 5.967674 GCATTCGATTCTGTTCTTACATTGG 59.032 40.000 0.00 0.00 32.86 3.16
1733 1818 5.796935 CGATTCTGTTCTTACATTGGCAAAG 59.203 40.000 3.01 1.42 32.86 2.77
1736 1821 3.826157 CTGTTCTTACATTGGCAAAGGGA 59.174 43.478 3.01 0.00 32.86 4.20
1774 1859 9.057089 CAAATTCAGGAGTTAAGTAGAAACTGT 57.943 33.333 0.00 0.00 37.31 3.55
1775 1860 8.608844 AATTCAGGAGTTAAGTAGAAACTGTG 57.391 34.615 0.00 0.00 37.31 3.66
1776 1861 6.726490 TCAGGAGTTAAGTAGAAACTGTGT 57.274 37.500 0.00 0.00 37.31 3.72
1777 1862 7.120923 TCAGGAGTTAAGTAGAAACTGTGTT 57.879 36.000 0.00 0.00 37.31 3.32
1778 1863 7.562135 TCAGGAGTTAAGTAGAAACTGTGTTT 58.438 34.615 0.00 0.00 37.31 2.83
1779 1864 7.709613 TCAGGAGTTAAGTAGAAACTGTGTTTC 59.290 37.037 13.41 13.41 37.31 2.78
1781 1866 8.265764 AGGAGTTAAGTAGAAACTGTGTTTCTT 58.734 33.333 24.47 13.37 39.30 2.52
1784 1869 9.099454 AGTTAAGTAGAAACTGTGTTTCTTCTG 57.901 33.333 24.47 0.00 39.30 3.02
1949 2081 9.474920 AACACTAACATTTCAATGGTATTTGTG 57.525 29.630 11.28 11.28 37.89 3.33
1980 2112 3.663995 TCAAGGGCAATTGTGAATGTG 57.336 42.857 7.40 0.00 0.00 3.21
2043 2175 4.765813 TTAGAAAAGGAGGATTACCCCG 57.234 45.455 0.00 0.00 36.73 5.73
2044 2176 1.844497 AGAAAAGGAGGATTACCCCGG 59.156 52.381 0.00 0.00 36.73 5.73
2045 2177 0.257905 AAAAGGAGGATTACCCCGGC 59.742 55.000 0.00 0.00 36.73 6.13
2046 2178 1.642513 AAAGGAGGATTACCCCGGCC 61.643 60.000 0.00 0.00 36.73 6.13
2047 2179 2.447959 GGAGGATTACCCCGGCCT 60.448 66.667 0.00 0.00 36.73 5.19
2048 2180 2.517798 GGAGGATTACCCCGGCCTC 61.518 68.421 13.52 13.52 44.84 4.70
2049 2181 1.459730 GAGGATTACCCCGGCCTCT 60.460 63.158 14.36 0.00 42.81 3.69
2050 2182 1.759459 GAGGATTACCCCGGCCTCTG 61.759 65.000 14.36 0.00 42.81 3.35
2051 2183 2.111251 GATTACCCCGGCCTCTGC 59.889 66.667 0.00 0.00 0.00 4.26
2052 2184 2.690881 ATTACCCCGGCCTCTGCA 60.691 61.111 0.00 0.00 40.13 4.41
2053 2185 2.056906 GATTACCCCGGCCTCTGCAT 62.057 60.000 0.00 0.00 40.13 3.96
2054 2186 2.056906 ATTACCCCGGCCTCTGCATC 62.057 60.000 0.00 0.00 40.13 3.91
2055 2187 3.696518 TACCCCGGCCTCTGCATCT 62.697 63.158 0.00 0.00 40.13 2.90
2056 2188 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
2057 2189 3.473647 CCCGGCCTCTGCATCTGA 61.474 66.667 0.00 0.00 40.13 3.27
2058 2190 2.108566 CCGGCCTCTGCATCTGAG 59.891 66.667 0.00 0.00 40.13 3.35
2059 2191 2.588314 CGGCCTCTGCATCTGAGC 60.588 66.667 0.00 0.00 40.13 4.26
2060 2192 2.588314 GGCCTCTGCATCTGAGCG 60.588 66.667 0.00 0.00 40.13 5.03
2061 2193 2.498248 GCCTCTGCATCTGAGCGA 59.502 61.111 0.00 0.00 37.31 4.93
2062 2194 1.069427 GCCTCTGCATCTGAGCGAT 59.931 57.895 0.00 0.00 37.31 4.58
2069 2201 2.317230 CATCTGAGCGATGCATGCA 58.683 52.632 25.04 25.04 42.75 3.96
2070 2202 0.235926 CATCTGAGCGATGCATGCAG 59.764 55.000 26.69 14.50 42.75 4.41
2071 2203 0.179054 ATCTGAGCGATGCATGCAGT 60.179 50.000 26.69 14.02 33.85 4.40
2072 2204 0.808847 TCTGAGCGATGCATGCAGTC 60.809 55.000 26.69 20.23 33.85 3.51
2073 2205 0.810426 CTGAGCGATGCATGCAGTCT 60.810 55.000 26.69 20.63 33.85 3.24
2074 2206 0.392060 TGAGCGATGCATGCAGTCTT 60.392 50.000 26.69 9.13 33.85 3.01
2075 2207 0.731417 GAGCGATGCATGCAGTCTTT 59.269 50.000 26.69 8.70 33.85 2.52
2076 2208 1.131883 GAGCGATGCATGCAGTCTTTT 59.868 47.619 26.69 7.85 33.85 2.27
2077 2209 1.542915 AGCGATGCATGCAGTCTTTTT 59.457 42.857 26.69 7.01 33.85 1.94
2078 2210 2.749076 AGCGATGCATGCAGTCTTTTTA 59.251 40.909 26.69 0.00 33.85 1.52
2079 2211 3.379372 AGCGATGCATGCAGTCTTTTTAT 59.621 39.130 26.69 5.33 33.85 1.40
2080 2212 4.107622 GCGATGCATGCAGTCTTTTTATT 58.892 39.130 26.69 4.49 0.00 1.40
2081 2213 5.066375 AGCGATGCATGCAGTCTTTTTATTA 59.934 36.000 26.69 0.00 33.85 0.98
2082 2214 5.743398 GCGATGCATGCAGTCTTTTTATTAA 59.257 36.000 26.69 0.00 0.00 1.40
2083 2215 6.418819 GCGATGCATGCAGTCTTTTTATTAAT 59.581 34.615 26.69 3.17 0.00 1.40
2084 2216 7.043192 GCGATGCATGCAGTCTTTTTATTAATT 60.043 33.333 26.69 2.43 0.00 1.40
2085 2217 9.449550 CGATGCATGCAGTCTTTTTATTAATTA 57.550 29.630 26.69 0.00 0.00 1.40
2107 2239 8.635765 ATTATTCTCAGAAACCTTACAAAGCA 57.364 30.769 0.00 0.00 0.00 3.91
2108 2240 5.751243 TTCTCAGAAACCTTACAAAGCAC 57.249 39.130 0.00 0.00 0.00 4.40
2109 2241 5.036117 TCTCAGAAACCTTACAAAGCACT 57.964 39.130 0.00 0.00 0.00 4.40
2110 2242 6.169557 TCTCAGAAACCTTACAAAGCACTA 57.830 37.500 0.00 0.00 0.00 2.74
2111 2243 6.769512 TCTCAGAAACCTTACAAAGCACTAT 58.230 36.000 0.00 0.00 0.00 2.12
2112 2244 7.903145 TCTCAGAAACCTTACAAAGCACTATA 58.097 34.615 0.00 0.00 0.00 1.31
2113 2245 8.540388 TCTCAGAAACCTTACAAAGCACTATAT 58.460 33.333 0.00 0.00 0.00 0.86
2114 2246 8.718102 TCAGAAACCTTACAAAGCACTATATC 57.282 34.615 0.00 0.00 0.00 1.63
2115 2247 8.318412 TCAGAAACCTTACAAAGCACTATATCA 58.682 33.333 0.00 0.00 0.00 2.15
2116 2248 8.607459 CAGAAACCTTACAAAGCACTATATCAG 58.393 37.037 0.00 0.00 0.00 2.90
2117 2249 8.322091 AGAAACCTTACAAAGCACTATATCAGT 58.678 33.333 0.00 0.00 38.32 3.41
2118 2250 9.595823 GAAACCTTACAAAGCACTATATCAGTA 57.404 33.333 0.00 0.00 34.98 2.74
2119 2251 9.953565 AAACCTTACAAAGCACTATATCAGTAA 57.046 29.630 0.00 0.00 34.98 2.24
2120 2252 9.601217 AACCTTACAAAGCACTATATCAGTAAG 57.399 33.333 0.00 0.00 37.80 2.34
2121 2253 7.711339 ACCTTACAAAGCACTATATCAGTAAGC 59.289 37.037 0.00 0.00 37.13 3.09
2122 2254 7.171678 CCTTACAAAGCACTATATCAGTAAGCC 59.828 40.741 0.00 0.00 37.13 4.35
2123 2255 6.240549 ACAAAGCACTATATCAGTAAGCCT 57.759 37.500 0.00 0.00 34.98 4.58
2124 2256 6.051717 ACAAAGCACTATATCAGTAAGCCTG 58.948 40.000 0.00 0.00 42.97 4.85
2132 2264 2.859992 CAGTAAGCCTGAAGCCACC 58.140 57.895 0.00 0.00 44.49 4.61
2133 2265 0.036732 CAGTAAGCCTGAAGCCACCA 59.963 55.000 0.00 0.00 44.49 4.17
2134 2266 0.995024 AGTAAGCCTGAAGCCACCAT 59.005 50.000 0.00 0.00 45.47 3.55
2135 2267 1.065126 AGTAAGCCTGAAGCCACCATC 60.065 52.381 0.00 0.00 45.47 3.51
2136 2268 1.065126 GTAAGCCTGAAGCCACCATCT 60.065 52.381 0.00 0.00 45.47 2.90
2137 2269 0.407139 AAGCCTGAAGCCACCATCTT 59.593 50.000 0.00 0.00 45.47 2.40
2138 2270 0.323178 AGCCTGAAGCCACCATCTTG 60.323 55.000 0.00 0.00 45.47 3.02
2139 2271 0.322816 GCCTGAAGCCACCATCTTGA 60.323 55.000 0.00 0.00 34.35 3.02
2140 2272 1.457346 CCTGAAGCCACCATCTTGAC 58.543 55.000 0.00 0.00 0.00 3.18
2141 2273 1.081892 CTGAAGCCACCATCTTGACG 58.918 55.000 0.00 0.00 0.00 4.35
2142 2274 0.684535 TGAAGCCACCATCTTGACGA 59.315 50.000 0.00 0.00 0.00 4.20
2143 2275 1.079503 GAAGCCACCATCTTGACGAC 58.920 55.000 0.00 0.00 0.00 4.34
2144 2276 0.396435 AAGCCACCATCTTGACGACA 59.604 50.000 0.00 0.00 0.00 4.35
2145 2277 0.320771 AGCCACCATCTTGACGACAC 60.321 55.000 0.00 0.00 0.00 3.67
2146 2278 0.602638 GCCACCATCTTGACGACACA 60.603 55.000 0.00 0.00 0.00 3.72
2147 2279 1.945819 GCCACCATCTTGACGACACAT 60.946 52.381 0.00 0.00 0.00 3.21
2148 2280 1.733912 CCACCATCTTGACGACACATG 59.266 52.381 0.00 0.00 0.00 3.21
2149 2281 2.416747 CACCATCTTGACGACACATGT 58.583 47.619 0.00 0.00 0.00 3.21
2150 2282 2.413112 CACCATCTTGACGACACATGTC 59.587 50.000 0.00 1.70 41.47 3.06
2161 2293 3.992260 GACACATGTCGCTACTCCTAT 57.008 47.619 0.00 0.00 35.12 2.57
2162 2294 4.308899 GACACATGTCGCTACTCCTATT 57.691 45.455 0.00 0.00 35.12 1.73
2163 2295 4.291783 GACACATGTCGCTACTCCTATTC 58.708 47.826 0.00 0.00 35.12 1.75
2164 2296 3.068307 ACACATGTCGCTACTCCTATTCC 59.932 47.826 0.00 0.00 0.00 3.01
2165 2297 2.628657 ACATGTCGCTACTCCTATTCCC 59.371 50.000 0.00 0.00 0.00 3.97
2166 2298 2.750141 TGTCGCTACTCCTATTCCCT 57.250 50.000 0.00 0.00 0.00 4.20
2167 2299 3.028094 TGTCGCTACTCCTATTCCCTT 57.972 47.619 0.00 0.00 0.00 3.95
2168 2300 2.693591 TGTCGCTACTCCTATTCCCTTG 59.306 50.000 0.00 0.00 0.00 3.61
2169 2301 2.957006 GTCGCTACTCCTATTCCCTTGA 59.043 50.000 0.00 0.00 0.00 3.02
2170 2302 3.574826 GTCGCTACTCCTATTCCCTTGAT 59.425 47.826 0.00 0.00 0.00 2.57
2171 2303 3.574396 TCGCTACTCCTATTCCCTTGATG 59.426 47.826 0.00 0.00 0.00 3.07
2172 2304 3.669536 GCTACTCCTATTCCCTTGATGC 58.330 50.000 0.00 0.00 0.00 3.91
2173 2305 3.071602 GCTACTCCTATTCCCTTGATGCA 59.928 47.826 0.00 0.00 0.00 3.96
2174 2306 3.853355 ACTCCTATTCCCTTGATGCAG 57.147 47.619 0.00 0.00 0.00 4.41
2175 2307 2.441001 ACTCCTATTCCCTTGATGCAGG 59.559 50.000 0.00 0.00 0.00 4.85
2181 2313 2.757099 CCTTGATGCAGGGGTGCC 60.757 66.667 0.00 0.00 0.00 5.01
2182 2314 3.136123 CTTGATGCAGGGGTGCCG 61.136 66.667 0.00 0.00 0.00 5.69
2183 2315 3.626996 CTTGATGCAGGGGTGCCGA 62.627 63.158 0.00 0.00 0.00 5.54
2184 2316 3.203086 TTGATGCAGGGGTGCCGAA 62.203 57.895 0.00 0.00 0.00 4.30
2185 2317 2.124151 GATGCAGGGGTGCCGAAT 60.124 61.111 0.00 0.00 0.00 3.34
2186 2318 2.440796 ATGCAGGGGTGCCGAATG 60.441 61.111 0.00 0.00 0.00 2.67
2187 2319 3.286694 ATGCAGGGGTGCCGAATGT 62.287 57.895 0.00 0.00 0.00 2.71
2188 2320 3.134127 GCAGGGGTGCCGAATGTC 61.134 66.667 0.00 0.00 0.00 3.06
2189 2321 2.438434 CAGGGGTGCCGAATGTCC 60.438 66.667 0.00 0.00 0.00 4.02
2190 2322 4.096003 AGGGGTGCCGAATGTCCG 62.096 66.667 0.00 0.00 0.00 4.79
2191 2323 4.090588 GGGGTGCCGAATGTCCGA 62.091 66.667 0.00 0.00 0.00 4.55
2192 2324 2.511600 GGGTGCCGAATGTCCGAG 60.512 66.667 0.00 0.00 0.00 4.63
2193 2325 3.195698 GGTGCCGAATGTCCGAGC 61.196 66.667 0.00 0.00 0.00 5.03
2194 2326 2.125512 GTGCCGAATGTCCGAGCT 60.126 61.111 0.00 0.00 0.00 4.09
2195 2327 1.741770 GTGCCGAATGTCCGAGCTT 60.742 57.895 0.00 0.00 0.00 3.74
2196 2328 0.459585 GTGCCGAATGTCCGAGCTTA 60.460 55.000 0.00 0.00 0.00 3.09
2197 2329 0.248012 TGCCGAATGTCCGAGCTTAA 59.752 50.000 0.00 0.00 0.00 1.85
2198 2330 1.134521 TGCCGAATGTCCGAGCTTAAT 60.135 47.619 0.00 0.00 0.00 1.40
2199 2331 2.101750 TGCCGAATGTCCGAGCTTAATA 59.898 45.455 0.00 0.00 0.00 0.98
2200 2332 2.475487 GCCGAATGTCCGAGCTTAATAC 59.525 50.000 0.00 0.00 0.00 1.89
2201 2333 3.057734 CCGAATGTCCGAGCTTAATACC 58.942 50.000 0.00 0.00 0.00 2.73
2202 2334 3.491964 CCGAATGTCCGAGCTTAATACCA 60.492 47.826 0.00 0.00 0.00 3.25
2203 2335 4.116961 CGAATGTCCGAGCTTAATACCAA 58.883 43.478 0.00 0.00 0.00 3.67
2204 2336 4.569162 CGAATGTCCGAGCTTAATACCAAA 59.431 41.667 0.00 0.00 0.00 3.28
2205 2337 5.501897 CGAATGTCCGAGCTTAATACCAAAC 60.502 44.000 0.00 0.00 0.00 2.93
2206 2338 4.274602 TGTCCGAGCTTAATACCAAACA 57.725 40.909 0.00 0.00 0.00 2.83
2207 2339 4.250464 TGTCCGAGCTTAATACCAAACAG 58.750 43.478 0.00 0.00 0.00 3.16
2208 2340 4.020928 TGTCCGAGCTTAATACCAAACAGA 60.021 41.667 0.00 0.00 0.00 3.41
2209 2341 4.329256 GTCCGAGCTTAATACCAAACAGAC 59.671 45.833 0.00 0.00 0.00 3.51
2210 2342 4.020928 TCCGAGCTTAATACCAAACAGACA 60.021 41.667 0.00 0.00 0.00 3.41
2211 2343 4.876107 CCGAGCTTAATACCAAACAGACAT 59.124 41.667 0.00 0.00 0.00 3.06
2212 2344 5.354234 CCGAGCTTAATACCAAACAGACATT 59.646 40.000 0.00 0.00 0.00 2.71
2213 2345 6.250819 CGAGCTTAATACCAAACAGACATTG 58.749 40.000 0.00 0.00 0.00 2.82
2214 2346 5.954335 AGCTTAATACCAAACAGACATTGC 58.046 37.500 0.00 0.00 0.00 3.56
2215 2347 5.476599 AGCTTAATACCAAACAGACATTGCA 59.523 36.000 0.00 0.00 0.00 4.08
2216 2348 5.572896 GCTTAATACCAAACAGACATTGCAC 59.427 40.000 0.00 0.00 0.00 4.57
2217 2349 4.519540 AATACCAAACAGACATTGCACC 57.480 40.909 0.00 0.00 0.00 5.01
2218 2350 1.774110 ACCAAACAGACATTGCACCA 58.226 45.000 0.00 0.00 0.00 4.17
2219 2351 2.106566 ACCAAACAGACATTGCACCAA 58.893 42.857 0.00 0.00 0.00 3.67
2220 2352 2.499289 ACCAAACAGACATTGCACCAAA 59.501 40.909 0.00 0.00 0.00 3.28
2221 2353 3.055530 ACCAAACAGACATTGCACCAAAA 60.056 39.130 0.00 0.00 0.00 2.44
2222 2354 3.309410 CCAAACAGACATTGCACCAAAAC 59.691 43.478 0.00 0.00 0.00 2.43
2223 2355 2.888834 ACAGACATTGCACCAAAACC 57.111 45.000 0.00 0.00 0.00 3.27
2224 2356 2.387757 ACAGACATTGCACCAAAACCT 58.612 42.857 0.00 0.00 0.00 3.50
2225 2357 3.561143 ACAGACATTGCACCAAAACCTA 58.439 40.909 0.00 0.00 0.00 3.08
2226 2358 3.569701 ACAGACATTGCACCAAAACCTAG 59.430 43.478 0.00 0.00 0.00 3.02
2227 2359 2.558359 AGACATTGCACCAAAACCTAGC 59.442 45.455 0.00 0.00 0.00 3.42
2228 2360 2.295909 GACATTGCACCAAAACCTAGCA 59.704 45.455 0.00 0.00 0.00 3.49
2229 2361 2.899256 ACATTGCACCAAAACCTAGCAT 59.101 40.909 0.00 0.00 34.87 3.79
2230 2362 3.056607 ACATTGCACCAAAACCTAGCATC 60.057 43.478 0.00 0.00 34.87 3.91
2231 2363 2.584835 TGCACCAAAACCTAGCATCT 57.415 45.000 0.00 0.00 0.00 2.90
2232 2364 3.712016 TGCACCAAAACCTAGCATCTA 57.288 42.857 0.00 0.00 0.00 1.98
2233 2365 4.027674 TGCACCAAAACCTAGCATCTAA 57.972 40.909 0.00 0.00 0.00 2.10
2234 2366 4.599041 TGCACCAAAACCTAGCATCTAAT 58.401 39.130 0.00 0.00 0.00 1.73
2235 2367 4.398988 TGCACCAAAACCTAGCATCTAATG 59.601 41.667 0.00 0.00 0.00 1.90
2246 2378 0.883833 CATCTAATGCCGAATGCCCC 59.116 55.000 0.00 0.00 40.16 5.80
2247 2379 0.478072 ATCTAATGCCGAATGCCCCA 59.522 50.000 0.00 0.00 40.16 4.96
2248 2380 0.478072 TCTAATGCCGAATGCCCCAT 59.522 50.000 0.00 0.00 40.16 4.00
2249 2381 1.133513 TCTAATGCCGAATGCCCCATT 60.134 47.619 0.00 0.00 40.16 3.16
2250 2382 1.000060 CTAATGCCGAATGCCCCATTG 60.000 52.381 0.00 0.00 40.16 2.82
2251 2383 2.314415 AATGCCGAATGCCCCATTGC 62.314 55.000 0.00 0.00 40.16 3.56
2252 2384 3.459965 GCCGAATGCCCCATTGCA 61.460 61.111 0.00 0.00 46.94 4.08
2253 2385 2.809706 CCGAATGCCCCATTGCAG 59.190 61.111 0.00 0.00 45.93 4.41
2254 2386 2.105528 CGAATGCCCCATTGCAGC 59.894 61.111 0.00 0.00 45.93 5.25
2255 2387 2.502577 GAATGCCCCATTGCAGCC 59.497 61.111 0.00 0.00 45.93 4.85
2256 2388 2.284773 AATGCCCCATTGCAGCCA 60.285 55.556 0.00 0.00 45.93 4.75
2257 2389 2.582734 GAATGCCCCATTGCAGCCAC 62.583 60.000 0.00 0.00 45.93 5.01
2258 2390 3.908904 ATGCCCCATTGCAGCCACA 62.909 57.895 0.00 0.00 45.93 4.17
2259 2391 3.078836 GCCCCATTGCAGCCACAT 61.079 61.111 0.00 0.00 0.00 3.21
2260 2392 1.757731 GCCCCATTGCAGCCACATA 60.758 57.895 0.00 0.00 0.00 2.29
2261 2393 2.019897 GCCCCATTGCAGCCACATAC 62.020 60.000 0.00 0.00 0.00 2.39
2262 2394 0.396139 CCCCATTGCAGCCACATACT 60.396 55.000 0.00 0.00 0.00 2.12
2263 2395 0.742505 CCCATTGCAGCCACATACTG 59.257 55.000 0.00 0.00 38.22 2.74
2264 2396 0.742505 CCATTGCAGCCACATACTGG 59.257 55.000 0.00 0.00 44.08 4.00
2265 2397 0.742505 CATTGCAGCCACATACTGGG 59.257 55.000 0.00 0.00 41.02 4.45
2266 2398 0.625316 ATTGCAGCCACATACTGGGA 59.375 50.000 0.00 0.00 41.02 4.37
2267 2399 0.403655 TTGCAGCCACATACTGGGAA 59.596 50.000 0.00 0.00 41.02 3.97
2268 2400 0.625316 TGCAGCCACATACTGGGAAT 59.375 50.000 0.00 0.00 41.02 3.01
2269 2401 1.027357 GCAGCCACATACTGGGAATG 58.973 55.000 0.00 0.00 41.02 2.67
2270 2402 1.683943 CAGCCACATACTGGGAATGG 58.316 55.000 0.00 0.00 41.02 3.16
2271 2403 0.552848 AGCCACATACTGGGAATGGG 59.447 55.000 0.00 0.00 41.02 4.00
2272 2404 0.258774 GCCACATACTGGGAATGGGT 59.741 55.000 0.00 0.00 41.02 4.51
2273 2405 1.750682 GCCACATACTGGGAATGGGTC 60.751 57.143 0.00 0.00 41.02 4.46
2274 2406 1.475034 CCACATACTGGGAATGGGTCG 60.475 57.143 0.00 0.00 36.18 4.79
2275 2407 0.180406 ACATACTGGGAATGGGTCGC 59.820 55.000 0.00 0.00 39.63 5.19
2276 2408 0.180171 CATACTGGGAATGGGTCGCA 59.820 55.000 0.00 0.00 46.26 5.10
2277 2409 0.180406 ATACTGGGAATGGGTCGCAC 59.820 55.000 0.00 0.00 43.79 5.34
2278 2410 1.195442 TACTGGGAATGGGTCGCACA 61.195 55.000 0.00 0.00 43.79 4.57
2279 2411 2.033448 TGGGAATGGGTCGCACAC 59.967 61.111 0.00 0.00 43.79 3.82
2280 2412 2.750237 GGGAATGGGTCGCACACC 60.750 66.667 0.00 0.00 45.97 4.16
2323 2455 4.082523 CGCCACCGTCCTCCACAT 62.083 66.667 0.00 0.00 0.00 3.21
2324 2456 2.717044 CGCCACCGTCCTCCACATA 61.717 63.158 0.00 0.00 0.00 2.29
2325 2457 1.600107 GCCACCGTCCTCCACATAA 59.400 57.895 0.00 0.00 0.00 1.90
2326 2458 0.743345 GCCACCGTCCTCCACATAAC 60.743 60.000 0.00 0.00 0.00 1.89
2327 2459 0.107848 CCACCGTCCTCCACATAACC 60.108 60.000 0.00 0.00 0.00 2.85
2328 2460 0.611200 CACCGTCCTCCACATAACCA 59.389 55.000 0.00 0.00 0.00 3.67
2329 2461 1.209504 CACCGTCCTCCACATAACCAT 59.790 52.381 0.00 0.00 0.00 3.55
2330 2462 1.485066 ACCGTCCTCCACATAACCATC 59.515 52.381 0.00 0.00 0.00 3.51
2331 2463 1.762957 CCGTCCTCCACATAACCATCT 59.237 52.381 0.00 0.00 0.00 2.90
2332 2464 2.170607 CCGTCCTCCACATAACCATCTT 59.829 50.000 0.00 0.00 0.00 2.40
2333 2465 3.370527 CCGTCCTCCACATAACCATCTTT 60.371 47.826 0.00 0.00 0.00 2.52
2334 2466 4.141801 CCGTCCTCCACATAACCATCTTTA 60.142 45.833 0.00 0.00 0.00 1.85
2335 2467 5.050490 CGTCCTCCACATAACCATCTTTAG 58.950 45.833 0.00 0.00 0.00 1.85
2336 2468 5.163447 CGTCCTCCACATAACCATCTTTAGA 60.163 44.000 0.00 0.00 0.00 2.10
2337 2469 6.284459 GTCCTCCACATAACCATCTTTAGAG 58.716 44.000 0.00 0.00 0.00 2.43
2338 2470 5.059833 CCTCCACATAACCATCTTTAGAGC 58.940 45.833 0.00 0.00 0.00 4.09
2339 2471 5.396772 CCTCCACATAACCATCTTTAGAGCA 60.397 44.000 0.00 0.00 0.00 4.26
2340 2472 5.674525 TCCACATAACCATCTTTAGAGCAG 58.325 41.667 0.00 0.00 0.00 4.24
2341 2473 4.818546 CCACATAACCATCTTTAGAGCAGG 59.181 45.833 0.00 0.00 0.00 4.85
2342 2474 5.431765 CACATAACCATCTTTAGAGCAGGT 58.568 41.667 0.00 0.00 33.11 4.00
2343 2475 6.408092 CCACATAACCATCTTTAGAGCAGGTA 60.408 42.308 0.00 0.00 31.98 3.08
2344 2476 6.480320 CACATAACCATCTTTAGAGCAGGTAC 59.520 42.308 0.00 0.00 31.98 3.34
2345 2477 4.489306 AACCATCTTTAGAGCAGGTACC 57.511 45.455 2.73 2.73 31.98 3.34
2346 2478 2.431057 ACCATCTTTAGAGCAGGTACCG 59.569 50.000 6.18 2.66 30.94 4.02
2347 2479 2.431057 CCATCTTTAGAGCAGGTACCGT 59.569 50.000 6.18 0.00 0.00 4.83
2348 2480 3.491104 CCATCTTTAGAGCAGGTACCGTC 60.491 52.174 6.18 5.06 0.00 4.79
2349 2481 1.741706 TCTTTAGAGCAGGTACCGTCG 59.258 52.381 6.18 0.04 0.00 5.12
2350 2482 0.171903 TTTAGAGCAGGTACCGTCGC 59.828 55.000 14.11 14.11 0.00 5.19
2351 2483 0.961857 TTAGAGCAGGTACCGTCGCA 60.962 55.000 21.24 6.15 0.00 5.10
2352 2484 0.961857 TAGAGCAGGTACCGTCGCAA 60.962 55.000 21.24 7.77 0.00 4.85
2353 2485 1.373748 GAGCAGGTACCGTCGCAAA 60.374 57.895 21.24 0.00 0.00 3.68
2354 2486 1.352156 GAGCAGGTACCGTCGCAAAG 61.352 60.000 21.24 2.64 0.00 2.77
2355 2487 1.373748 GCAGGTACCGTCGCAAAGA 60.374 57.895 16.29 0.00 0.00 2.52
2356 2488 1.623973 GCAGGTACCGTCGCAAAGAC 61.624 60.000 16.29 0.00 46.16 3.01
2357 2489 1.012486 CAGGTACCGTCGCAAAGACC 61.012 60.000 6.18 0.00 46.92 3.85
2358 2490 1.183676 AGGTACCGTCGCAAAGACCT 61.184 55.000 6.18 0.00 46.92 3.85
2359 2491 0.320160 GGTACCGTCGCAAAGACCTT 60.320 55.000 0.00 0.00 46.92 3.50
2360 2492 0.788391 GTACCGTCGCAAAGACCTTG 59.212 55.000 0.00 0.00 46.92 3.61
2373 2505 4.907457 CCTTGCCAGGTCAGTTGT 57.093 55.556 0.00 0.00 35.06 3.32
2374 2506 2.633860 CCTTGCCAGGTCAGTTGTC 58.366 57.895 0.00 0.00 35.06 3.18
2375 2507 1.230635 CCTTGCCAGGTCAGTTGTCG 61.231 60.000 0.00 0.00 35.06 4.35
2376 2508 0.249868 CTTGCCAGGTCAGTTGTCGA 60.250 55.000 0.00 0.00 0.00 4.20
2377 2509 0.396435 TTGCCAGGTCAGTTGTCGAT 59.604 50.000 0.00 0.00 0.00 3.59
2378 2510 0.320683 TGCCAGGTCAGTTGTCGATG 60.321 55.000 0.00 0.00 0.00 3.84
2379 2511 1.639298 GCCAGGTCAGTTGTCGATGC 61.639 60.000 0.00 0.00 0.00 3.91
2380 2512 1.021390 CCAGGTCAGTTGTCGATGCC 61.021 60.000 0.00 0.00 0.00 4.40
2381 2513 0.320683 CAGGTCAGTTGTCGATGCCA 60.321 55.000 0.00 0.00 0.00 4.92
2382 2514 0.320771 AGGTCAGTTGTCGATGCCAC 60.321 55.000 0.00 0.00 0.00 5.01
2383 2515 1.298859 GGTCAGTTGTCGATGCCACC 61.299 60.000 0.00 0.00 0.00 4.61
2384 2516 0.602638 GTCAGTTGTCGATGCCACCA 60.603 55.000 0.00 0.00 0.00 4.17
2385 2517 0.324614 TCAGTTGTCGATGCCACCAT 59.675 50.000 0.00 0.00 0.00 3.55
2386 2518 0.448990 CAGTTGTCGATGCCACCATG 59.551 55.000 0.00 0.00 0.00 3.66
2387 2519 0.677731 AGTTGTCGATGCCACCATGG 60.678 55.000 11.19 11.19 41.55 3.66
2396 2528 3.932009 CCACCATGGCGCCAAATA 58.068 55.556 36.33 10.72 0.00 1.40
2397 2529 1.735360 CCACCATGGCGCCAAATAG 59.265 57.895 36.33 23.50 0.00 1.73
2398 2530 1.066257 CACCATGGCGCCAAATAGC 59.934 57.895 36.33 0.84 0.00 2.97
2423 2555 4.899239 CCCTGCGCTCGTCCATCC 62.899 72.222 9.73 0.00 0.00 3.51
2424 2556 4.147449 CCTGCGCTCGTCCATCCA 62.147 66.667 9.73 0.00 0.00 3.41
2425 2557 2.584418 CTGCGCTCGTCCATCCAG 60.584 66.667 9.73 0.00 0.00 3.86
2426 2558 4.819761 TGCGCTCGTCCATCCAGC 62.820 66.667 9.73 0.00 0.00 4.85
2428 2560 4.147449 CGCTCGTCCATCCAGCCA 62.147 66.667 0.00 0.00 0.00 4.75
2429 2561 2.512515 GCTCGTCCATCCAGCCAC 60.513 66.667 0.00 0.00 0.00 5.01
2430 2562 2.981302 CTCGTCCATCCAGCCACA 59.019 61.111 0.00 0.00 0.00 4.17
2431 2563 1.524002 CTCGTCCATCCAGCCACAT 59.476 57.895 0.00 0.00 0.00 3.21
2432 2564 0.752658 CTCGTCCATCCAGCCACATA 59.247 55.000 0.00 0.00 0.00 2.29
2433 2565 1.345741 CTCGTCCATCCAGCCACATAT 59.654 52.381 0.00 0.00 0.00 1.78
2434 2566 1.070601 TCGTCCATCCAGCCACATATG 59.929 52.381 0.00 0.00 0.00 1.78
2435 2567 1.202687 CGTCCATCCAGCCACATATGT 60.203 52.381 1.41 1.41 0.00 2.29
2436 2568 2.746142 CGTCCATCCAGCCACATATGTT 60.746 50.000 5.37 0.00 0.00 2.71
2437 2569 2.620115 GTCCATCCAGCCACATATGTTG 59.380 50.000 5.37 3.80 0.00 3.33
2438 2570 1.338973 CCATCCAGCCACATATGTTGC 59.661 52.381 21.22 21.22 37.00 4.17
2439 2571 1.338973 CATCCAGCCACATATGTTGCC 59.661 52.381 24.10 9.91 37.40 4.52
2440 2572 0.747644 TCCAGCCACATATGTTGCCG 60.748 55.000 24.10 16.22 37.40 5.69
2441 2573 0.747644 CCAGCCACATATGTTGCCGA 60.748 55.000 24.10 0.00 37.40 5.54
2442 2574 1.311859 CAGCCACATATGTTGCCGAT 58.688 50.000 24.10 7.22 37.40 4.18
2443 2575 2.493035 CAGCCACATATGTTGCCGATA 58.507 47.619 24.10 0.00 37.40 2.92
2444 2576 3.076621 CAGCCACATATGTTGCCGATAT 58.923 45.455 24.10 6.55 37.40 1.63
2445 2577 3.125829 CAGCCACATATGTTGCCGATATC 59.874 47.826 24.10 0.00 37.40 1.63
2446 2578 3.008375 AGCCACATATGTTGCCGATATCT 59.992 43.478 24.10 5.25 37.40 1.98
2447 2579 4.222810 AGCCACATATGTTGCCGATATCTA 59.777 41.667 24.10 0.00 37.40 1.98
2448 2580 4.568359 GCCACATATGTTGCCGATATCTAG 59.432 45.833 18.76 0.00 31.28 2.43
2449 2581 5.624509 GCCACATATGTTGCCGATATCTAGA 60.625 44.000 18.76 0.00 31.28 2.43
2450 2582 6.577103 CCACATATGTTGCCGATATCTAGAT 58.423 40.000 10.73 10.73 0.00 1.98
2451 2583 6.478016 CCACATATGTTGCCGATATCTAGATG 59.522 42.308 15.79 0.00 0.00 2.90
2452 2584 6.019237 CACATATGTTGCCGATATCTAGATGC 60.019 42.308 15.79 10.36 0.00 3.91
2453 2585 4.541973 ATGTTGCCGATATCTAGATGCA 57.458 40.909 15.79 12.87 0.00 3.96
2454 2586 3.653344 TGTTGCCGATATCTAGATGCAC 58.347 45.455 15.79 10.62 0.00 4.57
2455 2587 2.996621 GTTGCCGATATCTAGATGCACC 59.003 50.000 15.79 5.12 0.00 5.01
2456 2588 2.247358 TGCCGATATCTAGATGCACCA 58.753 47.619 15.79 3.55 0.00 4.17
2457 2589 2.833943 TGCCGATATCTAGATGCACCAT 59.166 45.455 15.79 0.00 0.00 3.55
2458 2590 3.193263 GCCGATATCTAGATGCACCATG 58.807 50.000 15.79 0.00 0.00 3.66
2459 2591 3.193263 CCGATATCTAGATGCACCATGC 58.807 50.000 15.79 0.00 45.29 4.06
2460 2592 3.193263 CGATATCTAGATGCACCATGCC 58.807 50.000 15.79 0.00 44.23 4.40
2461 2593 3.368739 CGATATCTAGATGCACCATGCCA 60.369 47.826 15.79 0.00 44.23 4.92
2462 2594 2.267174 ATCTAGATGCACCATGCCAC 57.733 50.000 3.89 0.00 44.23 5.01
2463 2595 0.181114 TCTAGATGCACCATGCCACC 59.819 55.000 0.00 0.00 44.23 4.61
2464 2596 0.107066 CTAGATGCACCATGCCACCA 60.107 55.000 0.00 0.00 44.23 4.17
2465 2597 0.330941 TAGATGCACCATGCCACCAA 59.669 50.000 0.00 0.00 44.23 3.67
2466 2598 0.324923 AGATGCACCATGCCACCAAT 60.325 50.000 0.00 0.00 44.23 3.16
2467 2599 1.063792 AGATGCACCATGCCACCAATA 60.064 47.619 0.00 0.00 44.23 1.90
2468 2600 1.067516 GATGCACCATGCCACCAATAC 59.932 52.381 0.00 0.00 44.23 1.89
2469 2601 0.039472 TGCACCATGCCACCAATACT 59.961 50.000 0.00 0.00 44.23 2.12
2470 2602 1.185315 GCACCATGCCACCAATACTT 58.815 50.000 0.00 0.00 37.42 2.24
2471 2603 1.135024 GCACCATGCCACCAATACTTG 60.135 52.381 0.00 0.00 37.42 3.16
2472 2604 2.170166 CACCATGCCACCAATACTTGT 58.830 47.619 0.00 0.00 0.00 3.16
2473 2605 2.164219 CACCATGCCACCAATACTTGTC 59.836 50.000 0.00 0.00 0.00 3.18
2474 2606 1.401552 CCATGCCACCAATACTTGTCG 59.598 52.381 0.00 0.00 0.00 4.35
2475 2607 2.083774 CATGCCACCAATACTTGTCGT 58.916 47.619 0.00 0.00 0.00 4.34
2476 2608 1.803334 TGCCACCAATACTTGTCGTC 58.197 50.000 0.00 0.00 0.00 4.20
2477 2609 1.070914 TGCCACCAATACTTGTCGTCA 59.929 47.619 0.00 0.00 0.00 4.35
2478 2610 2.290008 TGCCACCAATACTTGTCGTCAT 60.290 45.455 0.00 0.00 0.00 3.06
2479 2611 2.351726 GCCACCAATACTTGTCGTCATC 59.648 50.000 0.00 0.00 0.00 2.92
2480 2612 2.936498 CCACCAATACTTGTCGTCATCC 59.064 50.000 0.00 0.00 0.00 3.51
2481 2613 3.595173 CACCAATACTTGTCGTCATCCA 58.405 45.455 0.00 0.00 0.00 3.41
2482 2614 3.618594 CACCAATACTTGTCGTCATCCAG 59.381 47.826 0.00 0.00 0.00 3.86
2483 2615 3.260884 ACCAATACTTGTCGTCATCCAGT 59.739 43.478 0.00 0.00 0.00 4.00
2484 2616 3.618594 CCAATACTTGTCGTCATCCAGTG 59.381 47.826 0.00 0.00 0.00 3.66
2485 2617 3.526931 ATACTTGTCGTCATCCAGTGG 57.473 47.619 1.40 1.40 0.00 4.00
2486 2618 0.320771 ACTTGTCGTCATCCAGTGGC 60.321 55.000 3.51 0.00 0.00 5.01
2539 2671 2.828145 GGCTCTGCCCAGGATCTC 59.172 66.667 0.00 0.00 44.06 2.75
2540 2672 2.068821 GGCTCTGCCCAGGATCTCA 61.069 63.158 0.00 0.00 44.06 3.27
2541 2673 1.145819 GCTCTGCCCAGGATCTCAC 59.854 63.158 0.00 0.00 0.00 3.51
2542 2674 1.620739 GCTCTGCCCAGGATCTCACA 61.621 60.000 0.00 0.00 0.00 3.58
2543 2675 1.129917 CTCTGCCCAGGATCTCACAT 58.870 55.000 0.00 0.00 0.00 3.21
2544 2676 1.489649 CTCTGCCCAGGATCTCACATT 59.510 52.381 0.00 0.00 0.00 2.71
2545 2677 1.211212 TCTGCCCAGGATCTCACATTG 59.789 52.381 0.00 0.00 0.00 2.82
2546 2678 1.211212 CTGCCCAGGATCTCACATTGA 59.789 52.381 0.00 0.00 0.00 2.57
2547 2679 1.634973 TGCCCAGGATCTCACATTGAA 59.365 47.619 0.00 0.00 0.00 2.69
2548 2680 2.242965 TGCCCAGGATCTCACATTGAAT 59.757 45.455 0.00 0.00 0.00 2.57
2549 2681 3.294214 GCCCAGGATCTCACATTGAATT 58.706 45.455 0.00 0.00 0.00 2.17
2550 2682 4.079844 TGCCCAGGATCTCACATTGAATTA 60.080 41.667 0.00 0.00 0.00 1.40
2551 2683 5.075493 GCCCAGGATCTCACATTGAATTAT 58.925 41.667 0.00 0.00 0.00 1.28
2552 2684 6.183361 TGCCCAGGATCTCACATTGAATTATA 60.183 38.462 0.00 0.00 0.00 0.98
2553 2685 6.373774 GCCCAGGATCTCACATTGAATTATAG 59.626 42.308 0.00 0.00 0.00 1.31
2554 2686 6.883217 CCCAGGATCTCACATTGAATTATAGG 59.117 42.308 0.00 0.00 0.00 2.57
2555 2687 7.256799 CCCAGGATCTCACATTGAATTATAGGA 60.257 40.741 0.00 0.00 0.00 2.94
2556 2688 7.823310 CCAGGATCTCACATTGAATTATAGGAG 59.177 40.741 0.00 0.00 0.00 3.69
2557 2689 8.591940 CAGGATCTCACATTGAATTATAGGAGA 58.408 37.037 0.00 0.00 34.97 3.71
2558 2690 9.336462 AGGATCTCACATTGAATTATAGGAGAT 57.664 33.333 0.00 0.00 41.95 2.75
2559 2691 9.381033 GGATCTCACATTGAATTATAGGAGATG 57.619 37.037 0.00 0.00 40.03 2.90
2560 2692 9.381033 GATCTCACATTGAATTATAGGAGATGG 57.619 37.037 0.00 0.00 40.03 3.51
2561 2693 8.496534 TCTCACATTGAATTATAGGAGATGGA 57.503 34.615 0.00 0.00 0.00 3.41
2562 2694 8.591940 TCTCACATTGAATTATAGGAGATGGAG 58.408 37.037 0.00 0.00 0.00 3.86
2563 2695 8.496534 TCACATTGAATTATAGGAGATGGAGA 57.503 34.615 0.00 0.00 0.00 3.71
2564 2696 8.937835 TCACATTGAATTATAGGAGATGGAGAA 58.062 33.333 0.00 0.00 0.00 2.87
2565 2697 9.736414 CACATTGAATTATAGGAGATGGAGAAT 57.264 33.333 0.00 0.00 0.00 2.40
2575 2707 8.914213 ATAGGAGATGGAGAATTATCATCAGT 57.086 34.615 1.97 0.00 39.59 3.41
2576 2708 7.630005 AGGAGATGGAGAATTATCATCAGTT 57.370 36.000 1.97 0.00 39.59 3.16
2577 2709 8.043429 AGGAGATGGAGAATTATCATCAGTTT 57.957 34.615 1.97 0.00 39.59 2.66
2578 2710 8.501070 AGGAGATGGAGAATTATCATCAGTTTT 58.499 33.333 1.97 0.00 39.59 2.43
2579 2711 9.784531 GGAGATGGAGAATTATCATCAGTTTTA 57.215 33.333 1.97 0.00 39.59 1.52
2583 2715 8.737168 TGGAGAATTATCATCAGTTTTAGTGG 57.263 34.615 1.97 0.00 0.00 4.00
2584 2716 7.775093 TGGAGAATTATCATCAGTTTTAGTGGG 59.225 37.037 1.97 0.00 0.00 4.61
2585 2717 7.255277 GGAGAATTATCATCAGTTTTAGTGGGC 60.255 40.741 1.97 0.00 0.00 5.36
2586 2718 7.118723 AGAATTATCATCAGTTTTAGTGGGCA 58.881 34.615 0.00 0.00 0.00 5.36
2587 2719 7.615365 AGAATTATCATCAGTTTTAGTGGGCAA 59.385 33.333 0.00 0.00 0.00 4.52
2588 2720 7.716799 ATTATCATCAGTTTTAGTGGGCAAA 57.283 32.000 0.00 0.00 0.00 3.68
2589 2721 7.716799 TTATCATCAGTTTTAGTGGGCAAAT 57.283 32.000 0.00 0.00 0.00 2.32
2590 2722 5.389859 TCATCAGTTTTAGTGGGCAAATG 57.610 39.130 0.00 0.00 0.00 2.32
2591 2723 3.658757 TCAGTTTTAGTGGGCAAATGC 57.341 42.857 0.00 0.00 41.14 3.56
2602 2734 3.142124 GCAAATGCCCATGAACCAC 57.858 52.632 0.00 0.00 34.31 4.16
2603 2735 0.321021 GCAAATGCCCATGAACCACA 59.679 50.000 0.00 0.00 34.31 4.17
2604 2736 1.065998 GCAAATGCCCATGAACCACAT 60.066 47.619 0.00 0.00 35.77 3.21
2605 2737 2.896168 CAAATGCCCATGAACCACATC 58.104 47.619 0.00 0.00 37.07 3.06
2606 2738 1.488390 AATGCCCATGAACCACATCC 58.512 50.000 0.00 0.00 37.07 3.51
2607 2739 0.397535 ATGCCCATGAACCACATCCC 60.398 55.000 0.00 0.00 37.07 3.85
2608 2740 1.307647 GCCCATGAACCACATCCCT 59.692 57.895 0.00 0.00 37.07 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 115 2.044946 GTGGCCATGGGGTGAGAC 60.045 66.667 9.72 0.00 36.17 3.36
115 116 3.338250 GGTGGCCATGGGGTGAGA 61.338 66.667 9.72 0.00 36.17 3.27
116 117 3.341629 AGGTGGCCATGGGGTGAG 61.342 66.667 9.72 0.00 36.17 3.51
117 118 3.660571 CAGGTGGCCATGGGGTGA 61.661 66.667 9.72 0.00 36.17 4.02
118 119 4.764771 CCAGGTGGCCATGGGGTG 62.765 72.222 16.58 6.63 36.17 4.61
120 121 3.996621 AACCAGGTGGCCATGGGG 61.997 66.667 25.80 20.66 41.13 4.96
121 122 2.681064 CAACCAGGTGGCCATGGG 60.681 66.667 25.80 20.98 41.13 4.00
139 140 2.263077 CGTCTCCAAGATGTTTCTCCG 58.737 52.381 0.00 0.00 0.00 4.63
144 145 1.625818 AGCTCCGTCTCCAAGATGTTT 59.374 47.619 0.00 0.00 29.27 2.83
299 300 1.227883 CCTCGCTCCGCTAGGTCTA 60.228 63.158 0.00 0.00 36.85 2.59
437 447 4.697756 TGGCCTTTCCAGCGACGG 62.698 66.667 3.32 0.00 40.72 4.79
471 481 1.241990 TTCAGTCCGTGTCCCTCTCG 61.242 60.000 0.00 0.00 0.00 4.04
481 491 5.717119 ACGTTTGTAAGATATTCAGTCCGT 58.283 37.500 0.00 0.00 0.00 4.69
549 560 2.642154 TCAACCCGCAGTCCTTTTTA 57.358 45.000 0.00 0.00 0.00 1.52
578 589 0.179124 TGCAAAAACGCCCTTGTGTC 60.179 50.000 0.00 0.00 33.02 3.67
601 612 2.328099 GGTCGTACGTCGTCAGGGT 61.328 63.158 16.05 0.00 40.80 4.34
705 716 9.981460 AGAAAGTGAATTTACATATCTTTCCCT 57.019 29.630 2.93 0.00 39.62 4.20
712 723 9.087424 GCCCAAAAGAAAGTGAATTTACATATC 57.913 33.333 2.93 0.00 0.00 1.63
713 724 7.759433 CGCCCAAAAGAAAGTGAATTTACATAT 59.241 33.333 2.93 0.00 0.00 1.78
714 725 7.040340 TCGCCCAAAAGAAAGTGAATTTACATA 60.040 33.333 2.93 0.00 0.00 2.29
715 726 5.925969 CGCCCAAAAGAAAGTGAATTTACAT 59.074 36.000 2.93 0.00 0.00 2.29
777 820 2.362503 ATGACCGCGACTGGGAGA 60.363 61.111 8.23 0.00 0.00 3.71
882 929 4.142773 GGAGAATATGATCGACGAGACCTC 60.143 50.000 3.01 0.00 0.00 3.85
890 937 6.294176 CCAAAATTGGGGAGAATATGATCGAC 60.294 42.308 4.18 0.00 44.70 4.20
958 1006 2.260434 CGAAACTTCCTCGCCGGA 59.740 61.111 5.05 0.00 41.06 5.14
1065 1116 4.569943 TCTTCTCCTTCAAATCTTGACCG 58.430 43.478 0.00 0.00 39.87 4.79
1066 1117 5.414144 CCTTCTTCTCCTTCAAATCTTGACC 59.586 44.000 0.00 0.00 39.87 4.02
1067 1118 5.414144 CCCTTCTTCTCCTTCAAATCTTGAC 59.586 44.000 0.00 0.00 39.87 3.18
1075 1126 3.053077 TGGTTCCCTTCTTCTCCTTCAA 58.947 45.455 0.00 0.00 0.00 2.69
1224 1278 2.828145 GGAGCCTCCTCATGCCTC 59.172 66.667 2.64 0.00 39.96 4.70
1229 1283 1.760086 CTCACCGGAGCCTCCTCAT 60.760 63.158 9.46 0.00 39.96 2.90
1244 1298 0.820226 CAGCCTCGTCATCCTTCTCA 59.180 55.000 0.00 0.00 0.00 3.27
1506 1560 0.941463 GATGGCGCAGGTACTCATCG 60.941 60.000 10.83 0.00 34.60 3.84
1594 1648 2.744741 TCAGAACTCAGTAGTCGAGCAG 59.255 50.000 0.00 0.00 33.75 4.24
1604 1658 3.977134 ATCAGCATGTCAGAACTCAGT 57.023 42.857 0.00 0.00 37.40 3.41
1609 1663 5.051173 CGATCTACAATCAGCATGTCAGAAC 60.051 44.000 0.00 0.00 37.40 3.01
1613 1677 4.654091 TCGATCTACAATCAGCATGTCA 57.346 40.909 0.00 0.00 37.40 3.58
1615 1679 4.212847 GCAATCGATCTACAATCAGCATGT 59.787 41.667 0.00 0.00 37.40 3.21
1620 1691 5.980698 AACTGCAATCGATCTACAATCAG 57.019 39.130 0.00 1.68 0.00 2.90
1632 1703 3.684305 TGATACTGGACAAACTGCAATCG 59.316 43.478 0.00 0.00 0.00 3.34
1640 1713 6.199154 CAGTCGATATGTGATACTGGACAAAC 59.801 42.308 0.00 0.00 35.12 2.93
1644 1717 5.440234 ACAGTCGATATGTGATACTGGAC 57.560 43.478 5.53 0.00 41.43 4.02
1672 1751 9.512588 AAAGTGAGTTCTCATTACATTGATTCT 57.487 29.630 5.80 0.00 0.00 2.40
1673 1752 9.766277 GAAAGTGAGTTCTCATTACATTGATTC 57.234 33.333 5.80 0.00 0.00 2.52
1686 1765 3.290308 TGCTCGAGAAAGTGAGTTCTC 57.710 47.619 18.75 5.10 46.75 2.87
1716 1795 3.365969 CGTCCCTTTGCCAATGTAAGAAC 60.366 47.826 0.00 0.00 0.00 3.01
1728 1807 2.190161 GAAACAAACACGTCCCTTTGC 58.810 47.619 8.95 0.00 31.63 3.68
1733 1818 4.425520 TGAATTTGAAACAAACACGTCCC 58.574 39.130 0.00 0.00 0.00 4.46
1736 1821 5.105917 ACTCCTGAATTTGAAACAAACACGT 60.106 36.000 0.00 0.00 0.00 4.49
1774 1859 0.250684 TGGCCGCATCAGAAGAAACA 60.251 50.000 0.00 0.00 0.00 2.83
1775 1860 0.881118 TTGGCCGCATCAGAAGAAAC 59.119 50.000 0.00 0.00 0.00 2.78
1776 1861 1.614996 TTTGGCCGCATCAGAAGAAA 58.385 45.000 0.00 0.00 0.00 2.52
1777 1862 1.838112 ATTTGGCCGCATCAGAAGAA 58.162 45.000 0.00 0.00 0.00 2.52
1778 1863 1.838112 AATTTGGCCGCATCAGAAGA 58.162 45.000 0.00 0.00 0.00 2.87
1779 1864 2.542411 GCTAATTTGGCCGCATCAGAAG 60.542 50.000 0.00 0.00 0.00 2.85
1781 1866 1.024271 GCTAATTTGGCCGCATCAGA 58.976 50.000 0.00 0.00 0.00 3.27
1784 1869 1.678101 AGAAGCTAATTTGGCCGCATC 59.322 47.619 0.00 0.00 0.00 3.91
1949 2081 5.105595 ACAATTGCCCTTGATCTCTAAAAGC 60.106 40.000 5.05 0.00 0.00 3.51
1980 2112 6.144078 ACAGGTATTTTCACTTGTTGAACC 57.856 37.500 0.00 0.00 44.28 3.62
2019 2151 5.947566 CGGGGTAATCCTCCTTTTCTAAAAA 59.052 40.000 0.00 0.00 35.33 1.94
2020 2152 5.503002 CGGGGTAATCCTCCTTTTCTAAAA 58.497 41.667 0.00 0.00 35.33 1.52
2021 2153 4.080186 CCGGGGTAATCCTCCTTTTCTAAA 60.080 45.833 0.00 0.00 35.33 1.85
2022 2154 3.457012 CCGGGGTAATCCTCCTTTTCTAA 59.543 47.826 0.00 0.00 35.33 2.10
2023 2155 3.043418 CCGGGGTAATCCTCCTTTTCTA 58.957 50.000 0.00 0.00 35.33 2.10
2024 2156 1.844497 CCGGGGTAATCCTCCTTTTCT 59.156 52.381 0.00 0.00 35.33 2.52
2025 2157 1.749635 GCCGGGGTAATCCTCCTTTTC 60.750 57.143 2.18 0.00 35.33 2.29
2026 2158 0.257905 GCCGGGGTAATCCTCCTTTT 59.742 55.000 2.18 0.00 35.33 2.27
2027 2159 1.642513 GGCCGGGGTAATCCTCCTTT 61.643 60.000 2.18 0.00 35.33 3.11
2028 2160 2.076803 GGCCGGGGTAATCCTCCTT 61.077 63.158 2.18 0.00 35.33 3.36
2029 2161 2.447959 GGCCGGGGTAATCCTCCT 60.448 66.667 2.18 0.00 35.33 3.69
2030 2162 2.447959 AGGCCGGGGTAATCCTCC 60.448 66.667 2.18 0.00 35.33 4.30
2031 2163 1.459730 AGAGGCCGGGGTAATCCTC 60.460 63.158 13.92 13.92 44.09 3.71
2032 2164 1.766461 CAGAGGCCGGGGTAATCCT 60.766 63.158 2.18 0.00 35.33 3.24
2033 2165 2.829592 CAGAGGCCGGGGTAATCC 59.170 66.667 2.18 0.00 0.00 3.01
2034 2166 2.056906 ATGCAGAGGCCGGGGTAATC 62.057 60.000 2.18 0.00 40.13 1.75
2035 2167 2.056906 GATGCAGAGGCCGGGGTAAT 62.057 60.000 2.18 0.00 40.13 1.89
2036 2168 2.690881 ATGCAGAGGCCGGGGTAA 60.691 61.111 2.18 0.00 40.13 2.85
2037 2169 3.161450 GATGCAGAGGCCGGGGTA 61.161 66.667 2.18 0.00 40.13 3.69
2039 2171 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
2040 2172 3.457625 CTCAGATGCAGAGGCCGGG 62.458 68.421 2.18 0.00 40.13 5.73
2041 2173 2.108566 CTCAGATGCAGAGGCCGG 59.891 66.667 0.00 0.00 40.13 6.13
2042 2174 2.588314 GCTCAGATGCAGAGGCCG 60.588 66.667 0.00 0.00 40.13 6.13
2043 2175 2.380433 ATCGCTCAGATGCAGAGGCC 62.380 60.000 0.00 0.00 38.36 5.19
2044 2176 1.069427 ATCGCTCAGATGCAGAGGC 59.931 57.895 3.87 0.00 38.36 4.70
2052 2184 0.179054 ACTGCATGCATCGCTCAGAT 60.179 50.000 22.97 0.00 41.01 2.90
2053 2185 0.808847 GACTGCATGCATCGCTCAGA 60.809 55.000 22.97 0.00 0.00 3.27
2054 2186 0.810426 AGACTGCATGCATCGCTCAG 60.810 55.000 22.97 10.18 0.00 3.35
2055 2187 0.392060 AAGACTGCATGCATCGCTCA 60.392 50.000 22.97 0.00 0.00 4.26
2056 2188 0.731417 AAAGACTGCATGCATCGCTC 59.269 50.000 22.97 13.06 0.00 5.03
2057 2189 1.171308 AAAAGACTGCATGCATCGCT 58.829 45.000 22.97 15.44 0.00 4.93
2058 2190 1.986698 AAAAAGACTGCATGCATCGC 58.013 45.000 22.97 13.32 0.00 4.58
2059 2191 7.919313 ATTAATAAAAAGACTGCATGCATCG 57.081 32.000 22.97 13.40 0.00 3.84
2081 2213 9.077885 TGCTTTGTAAGGTTTCTGAGAATAATT 57.922 29.630 0.00 0.00 0.00 1.40
2082 2214 8.515414 GTGCTTTGTAAGGTTTCTGAGAATAAT 58.485 33.333 0.00 0.00 0.00 1.28
2083 2215 7.719633 AGTGCTTTGTAAGGTTTCTGAGAATAA 59.280 33.333 0.00 0.00 0.00 1.40
2084 2216 7.224297 AGTGCTTTGTAAGGTTTCTGAGAATA 58.776 34.615 0.00 0.00 0.00 1.75
2085 2217 6.064717 AGTGCTTTGTAAGGTTTCTGAGAAT 58.935 36.000 0.00 0.00 0.00 2.40
2086 2218 5.437060 AGTGCTTTGTAAGGTTTCTGAGAA 58.563 37.500 0.00 0.00 0.00 2.87
2087 2219 5.036117 AGTGCTTTGTAAGGTTTCTGAGA 57.964 39.130 0.00 0.00 0.00 3.27
2088 2220 8.723942 ATATAGTGCTTTGTAAGGTTTCTGAG 57.276 34.615 0.00 0.00 0.00 3.35
2089 2221 8.318412 TGATATAGTGCTTTGTAAGGTTTCTGA 58.682 33.333 0.00 0.00 0.00 3.27
2090 2222 8.492673 TGATATAGTGCTTTGTAAGGTTTCTG 57.507 34.615 0.00 0.00 0.00 3.02
2091 2223 8.322091 ACTGATATAGTGCTTTGTAAGGTTTCT 58.678 33.333 0.00 0.00 38.49 2.52
2092 2224 8.494016 ACTGATATAGTGCTTTGTAAGGTTTC 57.506 34.615 0.00 0.00 38.49 2.78
2093 2225 9.953565 TTACTGATATAGTGCTTTGTAAGGTTT 57.046 29.630 0.00 0.00 40.65 3.27
2094 2226 9.601217 CTTACTGATATAGTGCTTTGTAAGGTT 57.399 33.333 0.00 0.00 40.65 3.50
2095 2227 7.711339 GCTTACTGATATAGTGCTTTGTAAGGT 59.289 37.037 0.00 0.00 40.65 3.50
2096 2228 7.171678 GGCTTACTGATATAGTGCTTTGTAAGG 59.828 40.741 0.00 0.00 40.65 2.69
2097 2229 7.928706 AGGCTTACTGATATAGTGCTTTGTAAG 59.071 37.037 0.00 0.00 40.65 2.34
2098 2230 7.792032 AGGCTTACTGATATAGTGCTTTGTAA 58.208 34.615 0.00 0.00 40.65 2.41
2099 2231 7.361457 AGGCTTACTGATATAGTGCTTTGTA 57.639 36.000 0.00 0.00 40.65 2.41
2100 2232 6.240549 AGGCTTACTGATATAGTGCTTTGT 57.759 37.500 0.00 0.00 40.65 2.83
2115 2247 0.995024 ATGGTGGCTTCAGGCTTACT 59.005 50.000 1.64 0.00 41.69 2.24
2116 2248 1.065126 AGATGGTGGCTTCAGGCTTAC 60.065 52.381 1.64 0.00 41.69 2.34
2117 2249 1.289160 AGATGGTGGCTTCAGGCTTA 58.711 50.000 1.64 0.00 41.69 3.09
2118 2250 0.407139 AAGATGGTGGCTTCAGGCTT 59.593 50.000 1.64 0.00 41.69 4.35
2119 2251 0.323178 CAAGATGGTGGCTTCAGGCT 60.323 55.000 1.64 0.00 41.69 4.58
2120 2252 0.322816 TCAAGATGGTGGCTTCAGGC 60.323 55.000 0.00 0.00 41.50 4.85
2121 2253 1.457346 GTCAAGATGGTGGCTTCAGG 58.543 55.000 0.00 0.00 0.00 3.86
2122 2254 1.081892 CGTCAAGATGGTGGCTTCAG 58.918 55.000 0.00 0.00 0.00 3.02
2123 2255 0.684535 TCGTCAAGATGGTGGCTTCA 59.315 50.000 0.00 0.00 0.00 3.02
2124 2256 1.079503 GTCGTCAAGATGGTGGCTTC 58.920 55.000 0.00 0.00 0.00 3.86
2125 2257 0.396435 TGTCGTCAAGATGGTGGCTT 59.604 50.000 0.00 0.00 0.00 4.35
2126 2258 0.320771 GTGTCGTCAAGATGGTGGCT 60.321 55.000 0.00 0.00 0.00 4.75
2127 2259 0.602638 TGTGTCGTCAAGATGGTGGC 60.603 55.000 0.00 0.00 0.00 5.01
2128 2260 1.733912 CATGTGTCGTCAAGATGGTGG 59.266 52.381 0.00 0.00 0.00 4.61
2129 2261 2.413112 GACATGTGTCGTCAAGATGGTG 59.587 50.000 1.15 0.00 35.12 4.17
2130 2262 2.688507 GACATGTGTCGTCAAGATGGT 58.311 47.619 1.15 0.00 35.12 3.55
2141 2273 3.992260 ATAGGAGTAGCGACATGTGTC 57.008 47.619 1.15 3.07 41.47 3.67
2142 2274 3.068307 GGAATAGGAGTAGCGACATGTGT 59.932 47.826 1.15 0.00 0.00 3.72
2143 2275 3.553096 GGGAATAGGAGTAGCGACATGTG 60.553 52.174 1.15 0.00 0.00 3.21
2144 2276 2.628657 GGGAATAGGAGTAGCGACATGT 59.371 50.000 0.00 0.00 0.00 3.21
2145 2277 2.894126 AGGGAATAGGAGTAGCGACATG 59.106 50.000 0.00 0.00 0.00 3.21
2146 2278 3.246416 AGGGAATAGGAGTAGCGACAT 57.754 47.619 0.00 0.00 0.00 3.06
2147 2279 2.693591 CAAGGGAATAGGAGTAGCGACA 59.306 50.000 0.00 0.00 0.00 4.35
2148 2280 2.957006 TCAAGGGAATAGGAGTAGCGAC 59.043 50.000 0.00 0.00 0.00 5.19
2149 2281 3.308035 TCAAGGGAATAGGAGTAGCGA 57.692 47.619 0.00 0.00 0.00 4.93
2150 2282 3.862642 GCATCAAGGGAATAGGAGTAGCG 60.863 52.174 0.00 0.00 0.00 4.26
2151 2283 3.071602 TGCATCAAGGGAATAGGAGTAGC 59.928 47.826 0.00 0.00 0.00 3.58
2152 2284 4.262808 CCTGCATCAAGGGAATAGGAGTAG 60.263 50.000 0.00 0.00 33.28 2.57
2153 2285 3.648067 CCTGCATCAAGGGAATAGGAGTA 59.352 47.826 0.00 0.00 33.28 2.59
2154 2286 2.441001 CCTGCATCAAGGGAATAGGAGT 59.559 50.000 0.00 0.00 33.28 3.85
2155 2287 3.137446 CCTGCATCAAGGGAATAGGAG 57.863 52.381 0.00 0.00 33.28 3.69
2164 2296 2.757099 GGCACCCCTGCATCAAGG 60.757 66.667 0.00 0.00 46.28 3.61
2165 2297 3.136123 CGGCACCCCTGCATCAAG 61.136 66.667 0.00 0.00 46.28 3.02
2166 2298 2.497792 ATTCGGCACCCCTGCATCAA 62.498 55.000 0.00 0.00 46.28 2.57
2167 2299 2.982643 ATTCGGCACCCCTGCATCA 61.983 57.895 0.00 0.00 46.28 3.07
2168 2300 2.124151 ATTCGGCACCCCTGCATC 60.124 61.111 0.00 0.00 46.28 3.91
2169 2301 2.440796 CATTCGGCACCCCTGCAT 60.441 61.111 0.00 0.00 46.28 3.96
2170 2302 3.918253 GACATTCGGCACCCCTGCA 62.918 63.158 0.00 0.00 46.28 4.41
2171 2303 3.134127 GACATTCGGCACCCCTGC 61.134 66.667 0.00 0.00 43.41 4.85
2172 2304 2.438434 GGACATTCGGCACCCCTG 60.438 66.667 0.00 0.00 0.00 4.45
2173 2305 4.096003 CGGACATTCGGCACCCCT 62.096 66.667 0.00 0.00 0.00 4.79
2174 2306 4.090588 TCGGACATTCGGCACCCC 62.091 66.667 0.00 0.00 0.00 4.95
2175 2307 2.511600 CTCGGACATTCGGCACCC 60.512 66.667 0.00 0.00 0.00 4.61
2176 2308 3.195698 GCTCGGACATTCGGCACC 61.196 66.667 0.00 0.00 0.00 5.01
2177 2309 0.459585 TAAGCTCGGACATTCGGCAC 60.460 55.000 0.00 0.00 0.00 5.01
2178 2310 0.248012 TTAAGCTCGGACATTCGGCA 59.752 50.000 0.00 0.00 0.00 5.69
2179 2311 1.583054 ATTAAGCTCGGACATTCGGC 58.417 50.000 0.00 0.00 0.00 5.54
2180 2312 3.057734 GGTATTAAGCTCGGACATTCGG 58.942 50.000 0.00 0.00 0.00 4.30
2181 2313 3.713288 TGGTATTAAGCTCGGACATTCG 58.287 45.455 0.00 0.00 0.00 3.34
2182 2314 5.353123 TGTTTGGTATTAAGCTCGGACATTC 59.647 40.000 0.00 0.00 0.00 2.67
2183 2315 5.250200 TGTTTGGTATTAAGCTCGGACATT 58.750 37.500 0.00 0.00 0.00 2.71
2184 2316 4.839121 TGTTTGGTATTAAGCTCGGACAT 58.161 39.130 0.00 0.00 0.00 3.06
2185 2317 4.020928 TCTGTTTGGTATTAAGCTCGGACA 60.021 41.667 0.00 0.00 0.00 4.02
2186 2318 4.329256 GTCTGTTTGGTATTAAGCTCGGAC 59.671 45.833 0.00 0.00 0.00 4.79
2187 2319 4.020928 TGTCTGTTTGGTATTAAGCTCGGA 60.021 41.667 0.00 0.00 0.00 4.55
2188 2320 4.250464 TGTCTGTTTGGTATTAAGCTCGG 58.750 43.478 0.00 0.00 0.00 4.63
2189 2321 6.250819 CAATGTCTGTTTGGTATTAAGCTCG 58.749 40.000 0.00 0.00 0.00 5.03
2190 2322 6.030228 GCAATGTCTGTTTGGTATTAAGCTC 58.970 40.000 0.00 0.00 0.00 4.09
2191 2323 5.476599 TGCAATGTCTGTTTGGTATTAAGCT 59.523 36.000 0.00 0.00 0.00 3.74
2192 2324 5.572896 GTGCAATGTCTGTTTGGTATTAAGC 59.427 40.000 0.00 0.00 0.00 3.09
2193 2325 6.092748 GGTGCAATGTCTGTTTGGTATTAAG 58.907 40.000 0.00 0.00 0.00 1.85
2194 2326 5.536538 TGGTGCAATGTCTGTTTGGTATTAA 59.463 36.000 0.00 0.00 0.00 1.40
2195 2327 5.073428 TGGTGCAATGTCTGTTTGGTATTA 58.927 37.500 0.00 0.00 0.00 0.98
2196 2328 3.894427 TGGTGCAATGTCTGTTTGGTATT 59.106 39.130 0.00 0.00 0.00 1.89
2197 2329 3.495331 TGGTGCAATGTCTGTTTGGTAT 58.505 40.909 0.00 0.00 0.00 2.73
2198 2330 2.937519 TGGTGCAATGTCTGTTTGGTA 58.062 42.857 0.00 0.00 0.00 3.25
2199 2331 1.774110 TGGTGCAATGTCTGTTTGGT 58.226 45.000 0.00 0.00 0.00 3.67
2200 2332 2.886862 TTGGTGCAATGTCTGTTTGG 57.113 45.000 0.00 0.00 0.00 3.28
2201 2333 3.309410 GGTTTTGGTGCAATGTCTGTTTG 59.691 43.478 0.00 0.00 0.00 2.93
2202 2334 3.197549 AGGTTTTGGTGCAATGTCTGTTT 59.802 39.130 0.00 0.00 0.00 2.83
2203 2335 2.765699 AGGTTTTGGTGCAATGTCTGTT 59.234 40.909 0.00 0.00 0.00 3.16
2204 2336 2.387757 AGGTTTTGGTGCAATGTCTGT 58.612 42.857 0.00 0.00 0.00 3.41
2205 2337 3.612479 GCTAGGTTTTGGTGCAATGTCTG 60.612 47.826 0.00 0.00 0.00 3.51
2206 2338 2.558359 GCTAGGTTTTGGTGCAATGTCT 59.442 45.455 0.00 0.00 0.00 3.41
2207 2339 2.295909 TGCTAGGTTTTGGTGCAATGTC 59.704 45.455 0.00 0.00 0.00 3.06
2208 2340 2.315176 TGCTAGGTTTTGGTGCAATGT 58.685 42.857 0.00 0.00 0.00 2.71
2209 2341 3.194116 AGATGCTAGGTTTTGGTGCAATG 59.806 43.478 0.00 0.00 37.20 2.82
2210 2342 3.434309 AGATGCTAGGTTTTGGTGCAAT 58.566 40.909 0.00 0.00 37.20 3.56
2211 2343 2.875296 AGATGCTAGGTTTTGGTGCAA 58.125 42.857 0.00 0.00 37.20 4.08
2212 2344 2.584835 AGATGCTAGGTTTTGGTGCA 57.415 45.000 0.00 0.00 38.05 4.57
2213 2345 4.925068 CATTAGATGCTAGGTTTTGGTGC 58.075 43.478 0.00 0.00 0.00 5.01
2235 2367 3.435030 CTGCAATGGGGCATTCGGC 62.435 63.158 0.00 0.00 43.97 5.54
2236 2368 2.809706 CTGCAATGGGGCATTCGG 59.190 61.111 0.00 0.00 43.97 4.30
2237 2369 2.105528 GCTGCAATGGGGCATTCG 59.894 61.111 0.00 0.00 43.97 3.34
2238 2370 2.360767 TGGCTGCAATGGGGCATTC 61.361 57.895 0.50 0.00 43.97 2.67
2239 2371 2.284773 TGGCTGCAATGGGGCATT 60.285 55.556 0.50 0.00 43.97 3.56
2240 2372 3.078836 GTGGCTGCAATGGGGCAT 61.079 61.111 0.50 0.00 43.97 4.40
2241 2373 2.511457 TATGTGGCTGCAATGGGGCA 62.511 55.000 0.50 0.00 42.53 5.36
2242 2374 1.757731 TATGTGGCTGCAATGGGGC 60.758 57.895 0.50 0.00 0.00 5.80
2243 2375 0.396139 AGTATGTGGCTGCAATGGGG 60.396 55.000 0.50 0.00 0.00 4.96
2244 2376 0.742505 CAGTATGTGGCTGCAATGGG 59.257 55.000 0.50 0.00 0.00 4.00
2245 2377 0.742505 CCAGTATGTGGCTGCAATGG 59.257 55.000 0.50 0.00 40.39 3.16
2246 2378 0.742505 CCCAGTATGTGGCTGCAATG 59.257 55.000 0.50 0.00 46.45 2.82
2247 2379 0.625316 TCCCAGTATGTGGCTGCAAT 59.375 50.000 0.50 0.00 46.45 3.56
2248 2380 0.403655 TTCCCAGTATGTGGCTGCAA 59.596 50.000 0.50 0.00 46.45 4.08
2249 2381 0.625316 ATTCCCAGTATGTGGCTGCA 59.375 50.000 0.50 0.00 46.45 4.41
2250 2382 1.027357 CATTCCCAGTATGTGGCTGC 58.973 55.000 0.00 0.00 46.45 5.25
2251 2383 1.683943 CCATTCCCAGTATGTGGCTG 58.316 55.000 0.00 0.00 46.45 4.85
2252 2384 0.552848 CCCATTCCCAGTATGTGGCT 59.447 55.000 0.00 0.00 46.45 4.75
2253 2385 0.258774 ACCCATTCCCAGTATGTGGC 59.741 55.000 0.00 0.00 46.45 5.01
2255 2387 1.953559 CGACCCATTCCCAGTATGTG 58.046 55.000 0.00 0.00 0.00 3.21
2256 2388 0.180406 GCGACCCATTCCCAGTATGT 59.820 55.000 0.00 0.00 0.00 2.29
2257 2389 0.180171 TGCGACCCATTCCCAGTATG 59.820 55.000 0.00 0.00 0.00 2.39
2258 2390 0.180406 GTGCGACCCATTCCCAGTAT 59.820 55.000 0.00 0.00 0.00 2.12
2259 2391 1.195442 TGTGCGACCCATTCCCAGTA 61.195 55.000 0.00 0.00 0.00 2.74
2260 2392 2.351276 GTGCGACCCATTCCCAGT 59.649 61.111 0.00 0.00 0.00 4.00
2261 2393 2.040544 GTGTGCGACCCATTCCCAG 61.041 63.158 0.00 0.00 0.00 4.45
2262 2394 2.033448 GTGTGCGACCCATTCCCA 59.967 61.111 0.00 0.00 0.00 4.37
2263 2395 2.750237 GGTGTGCGACCCATTCCC 60.750 66.667 0.00 0.00 39.10 3.97
2264 2396 2.033448 TGGTGTGCGACCCATTCC 59.967 61.111 2.40 0.00 45.45 3.01
2265 2397 1.298859 GACTGGTGTGCGACCCATTC 61.299 60.000 2.40 0.00 45.45 2.67
2266 2398 1.302511 GACTGGTGTGCGACCCATT 60.303 57.895 2.40 0.00 45.45 3.16
2267 2399 2.347490 GACTGGTGTGCGACCCAT 59.653 61.111 2.40 0.00 45.45 4.00
2268 2400 3.936203 GGACTGGTGTGCGACCCA 61.936 66.667 2.40 0.00 45.45 4.51
2306 2438 2.233605 TTATGTGGAGGACGGTGGCG 62.234 60.000 0.00 0.00 0.00 5.69
2307 2439 0.743345 GTTATGTGGAGGACGGTGGC 60.743 60.000 0.00 0.00 0.00 5.01
2308 2440 0.107848 GGTTATGTGGAGGACGGTGG 60.108 60.000 0.00 0.00 0.00 4.61
2309 2441 0.611200 TGGTTATGTGGAGGACGGTG 59.389 55.000 0.00 0.00 0.00 4.94
2310 2442 1.485066 GATGGTTATGTGGAGGACGGT 59.515 52.381 0.00 0.00 0.00 4.83
2311 2443 1.762957 AGATGGTTATGTGGAGGACGG 59.237 52.381 0.00 0.00 0.00 4.79
2312 2444 3.543680 AAGATGGTTATGTGGAGGACG 57.456 47.619 0.00 0.00 0.00 4.79
2313 2445 6.235231 TCTAAAGATGGTTATGTGGAGGAC 57.765 41.667 0.00 0.00 0.00 3.85
2314 2446 5.163301 GCTCTAAAGATGGTTATGTGGAGGA 60.163 44.000 0.00 0.00 0.00 3.71
2315 2447 5.059833 GCTCTAAAGATGGTTATGTGGAGG 58.940 45.833 0.00 0.00 0.00 4.30
2316 2448 5.674525 TGCTCTAAAGATGGTTATGTGGAG 58.325 41.667 0.00 0.00 0.00 3.86
2317 2449 5.396772 CCTGCTCTAAAGATGGTTATGTGGA 60.397 44.000 0.00 0.00 0.00 4.02
2318 2450 4.818546 CCTGCTCTAAAGATGGTTATGTGG 59.181 45.833 0.00 0.00 0.00 4.17
2319 2451 5.431765 ACCTGCTCTAAAGATGGTTATGTG 58.568 41.667 0.00 0.00 0.00 3.21
2320 2452 5.700402 ACCTGCTCTAAAGATGGTTATGT 57.300 39.130 0.00 0.00 0.00 2.29
2321 2453 5.992217 GGTACCTGCTCTAAAGATGGTTATG 59.008 44.000 4.06 0.00 33.55 1.90
2322 2454 5.221461 CGGTACCTGCTCTAAAGATGGTTAT 60.221 44.000 10.90 0.00 33.55 1.89
2323 2455 4.098960 CGGTACCTGCTCTAAAGATGGTTA 59.901 45.833 10.90 0.00 33.55 2.85
2324 2456 3.118738 CGGTACCTGCTCTAAAGATGGTT 60.119 47.826 10.90 0.00 33.55 3.67
2325 2457 2.431057 CGGTACCTGCTCTAAAGATGGT 59.569 50.000 10.90 0.00 35.05 3.55
2326 2458 2.431057 ACGGTACCTGCTCTAAAGATGG 59.569 50.000 10.90 0.00 0.00 3.51
2327 2459 3.707793 GACGGTACCTGCTCTAAAGATG 58.292 50.000 10.90 0.00 0.00 2.90
2328 2460 2.358267 CGACGGTACCTGCTCTAAAGAT 59.642 50.000 10.90 0.00 0.00 2.40
2329 2461 1.741706 CGACGGTACCTGCTCTAAAGA 59.258 52.381 10.90 0.00 0.00 2.52
2330 2462 1.798079 GCGACGGTACCTGCTCTAAAG 60.798 57.143 10.90 0.00 0.00 1.85
2331 2463 0.171903 GCGACGGTACCTGCTCTAAA 59.828 55.000 10.90 0.00 0.00 1.85
2332 2464 0.961857 TGCGACGGTACCTGCTCTAA 60.962 55.000 10.90 0.00 0.00 2.10
2333 2465 0.961857 TTGCGACGGTACCTGCTCTA 60.962 55.000 10.90 0.00 0.00 2.43
2334 2466 1.812686 TTTGCGACGGTACCTGCTCT 61.813 55.000 10.90 0.00 0.00 4.09
2335 2467 1.352156 CTTTGCGACGGTACCTGCTC 61.352 60.000 10.90 0.73 0.00 4.26
2336 2468 1.374252 CTTTGCGACGGTACCTGCT 60.374 57.895 10.90 0.00 0.00 4.24
2337 2469 1.373748 TCTTTGCGACGGTACCTGC 60.374 57.895 10.90 11.70 0.00 4.85
2338 2470 1.012486 GGTCTTTGCGACGGTACCTG 61.012 60.000 10.90 6.27 43.79 4.00
2339 2471 1.183676 AGGTCTTTGCGACGGTACCT 61.184 55.000 10.90 0.00 43.79 3.08
2340 2472 0.320160 AAGGTCTTTGCGACGGTACC 60.320 55.000 0.16 0.16 43.79 3.34
2341 2473 0.788391 CAAGGTCTTTGCGACGGTAC 59.212 55.000 0.00 0.00 43.79 3.34
2342 2474 3.204505 CAAGGTCTTTGCGACGGTA 57.795 52.632 0.00 0.00 43.79 4.02
2343 2475 4.043168 CAAGGTCTTTGCGACGGT 57.957 55.556 0.00 0.00 43.79 4.83
2357 2489 0.249868 TCGACAACTGACCTGGCAAG 60.250 55.000 0.00 0.00 0.00 4.01
2358 2490 0.396435 ATCGACAACTGACCTGGCAA 59.604 50.000 0.00 0.00 0.00 4.52
2359 2491 0.320683 CATCGACAACTGACCTGGCA 60.321 55.000 0.00 0.00 0.00 4.92
2360 2492 1.639298 GCATCGACAACTGACCTGGC 61.639 60.000 0.00 0.00 0.00 4.85
2361 2493 1.021390 GGCATCGACAACTGACCTGG 61.021 60.000 0.00 0.00 0.00 4.45
2362 2494 0.320683 TGGCATCGACAACTGACCTG 60.321 55.000 0.00 0.00 0.00 4.00
2363 2495 0.320771 GTGGCATCGACAACTGACCT 60.321 55.000 0.00 0.00 0.00 3.85
2364 2496 1.298859 GGTGGCATCGACAACTGACC 61.299 60.000 0.00 0.00 0.00 4.02
2365 2497 0.602638 TGGTGGCATCGACAACTGAC 60.603 55.000 0.00 0.00 0.00 3.51
2366 2498 0.324614 ATGGTGGCATCGACAACTGA 59.675 50.000 0.00 0.00 0.00 3.41
2367 2499 0.448990 CATGGTGGCATCGACAACTG 59.551 55.000 0.00 0.00 0.00 3.16
2368 2500 0.677731 CCATGGTGGCATCGACAACT 60.678 55.000 2.57 0.00 0.00 3.16
2369 2501 1.802636 CCATGGTGGCATCGACAAC 59.197 57.895 2.57 0.00 0.00 3.32
2370 2502 4.317359 CCATGGTGGCATCGACAA 57.683 55.556 2.57 0.00 0.00 3.18
2379 2511 1.735360 CTATTTGGCGCCATGGTGG 59.265 57.895 33.25 17.04 41.55 4.61
2380 2512 1.066257 GCTATTTGGCGCCATGGTG 59.934 57.895 33.25 21.43 0.00 4.17
2381 2513 3.525221 GCTATTTGGCGCCATGGT 58.475 55.556 33.25 21.06 0.00 3.55
2389 2521 4.552745 GCGGTGGCGCTATTTGGC 62.553 66.667 7.64 0.00 0.00 4.52
2390 2522 3.887868 GGCGGTGGCGCTATTTGG 61.888 66.667 7.64 0.00 41.24 3.28
2406 2538 4.899239 GGATGGACGAGCGCAGGG 62.899 72.222 11.47 0.00 0.00 4.45
2407 2539 4.147449 TGGATGGACGAGCGCAGG 62.147 66.667 11.47 2.47 0.00 4.85
2408 2540 2.584418 CTGGATGGACGAGCGCAG 60.584 66.667 11.47 5.62 0.00 5.18
2409 2541 4.819761 GCTGGATGGACGAGCGCA 62.820 66.667 11.47 0.00 40.17 6.09
2412 2544 2.512515 GTGGCTGGATGGACGAGC 60.513 66.667 0.00 0.00 46.94 5.03
2413 2545 0.752658 TATGTGGCTGGATGGACGAG 59.247 55.000 0.00 0.00 0.00 4.18
2414 2546 1.070601 CATATGTGGCTGGATGGACGA 59.929 52.381 0.00 0.00 0.00 4.20
2415 2547 1.202687 ACATATGTGGCTGGATGGACG 60.203 52.381 7.78 0.00 0.00 4.79
2416 2548 2.620115 CAACATATGTGGCTGGATGGAC 59.380 50.000 9.63 0.00 0.00 4.02
2417 2549 2.934887 CAACATATGTGGCTGGATGGA 58.065 47.619 9.63 0.00 0.00 3.41
2418 2550 1.338973 GCAACATATGTGGCTGGATGG 59.661 52.381 25.28 2.15 41.68 3.51
2419 2551 1.338973 GGCAACATATGTGGCTGGATG 59.661 52.381 29.71 14.59 44.30 3.51
2420 2552 1.696063 GGCAACATATGTGGCTGGAT 58.304 50.000 29.71 1.68 44.30 3.41
2421 2553 0.747644 CGGCAACATATGTGGCTGGA 60.748 55.000 29.60 0.00 45.43 3.86
2422 2554 1.729276 CGGCAACATATGTGGCTGG 59.271 57.895 29.60 19.99 45.43 4.85
2424 2556 2.928801 TATCGGCAACATATGTGGCT 57.071 45.000 29.71 16.06 44.30 4.75
2425 2557 3.338249 AGATATCGGCAACATATGTGGC 58.662 45.455 24.69 24.69 44.15 5.01
2426 2558 5.965922 TCTAGATATCGGCAACATATGTGG 58.034 41.667 9.63 7.62 0.00 4.17
2427 2559 6.019237 GCATCTAGATATCGGCAACATATGTG 60.019 42.308 9.63 5.10 0.00 3.21
2428 2560 6.045318 GCATCTAGATATCGGCAACATATGT 58.955 40.000 4.54 1.41 0.00 2.29
2429 2561 6.019237 GTGCATCTAGATATCGGCAACATATG 60.019 42.308 14.95 0.00 32.50 1.78
2430 2562 6.045318 GTGCATCTAGATATCGGCAACATAT 58.955 40.000 14.95 0.00 32.50 1.78
2431 2563 5.410924 GTGCATCTAGATATCGGCAACATA 58.589 41.667 14.95 0.00 32.50 2.29
2432 2564 4.248859 GTGCATCTAGATATCGGCAACAT 58.751 43.478 14.95 0.00 32.50 2.71
2433 2565 3.554960 GGTGCATCTAGATATCGGCAACA 60.555 47.826 20.32 2.69 38.74 3.33
2434 2566 2.996621 GGTGCATCTAGATATCGGCAAC 59.003 50.000 14.95 14.10 32.50 4.17
2435 2567 2.632512 TGGTGCATCTAGATATCGGCAA 59.367 45.455 14.95 1.21 32.50 4.52
2436 2568 2.247358 TGGTGCATCTAGATATCGGCA 58.753 47.619 4.54 8.12 0.00 5.69
2437 2569 3.193263 CATGGTGCATCTAGATATCGGC 58.807 50.000 4.54 5.37 0.00 5.54
2438 2570 3.193263 GCATGGTGCATCTAGATATCGG 58.807 50.000 4.54 0.00 44.26 4.18
2448 2580 6.753409 CAAGTATTGGTGGCATGGTGCATC 62.753 50.000 4.17 0.00 43.93 3.91
2449 2581 4.998500 CAAGTATTGGTGGCATGGTGCAT 61.998 47.826 4.17 0.00 43.93 3.96
2450 2582 3.724735 CAAGTATTGGTGGCATGGTGCA 61.725 50.000 4.17 0.00 43.93 4.57
2451 2583 1.135024 CAAGTATTGGTGGCATGGTGC 60.135 52.381 0.00 0.00 43.94 5.01
2452 2584 2.945447 CAAGTATTGGTGGCATGGTG 57.055 50.000 0.00 0.00 43.94 4.17
2464 2596 3.861840 CCACTGGATGACGACAAGTATT 58.138 45.455 0.00 0.00 0.00 1.89
2465 2597 2.418746 GCCACTGGATGACGACAAGTAT 60.419 50.000 0.00 0.00 0.00 2.12
2466 2598 1.067142 GCCACTGGATGACGACAAGTA 60.067 52.381 0.00 0.00 0.00 2.24
2467 2599 0.320771 GCCACTGGATGACGACAAGT 60.321 55.000 0.00 0.00 0.00 3.16
2468 2600 1.354337 CGCCACTGGATGACGACAAG 61.354 60.000 0.00 0.00 0.00 3.16
2469 2601 1.374125 CGCCACTGGATGACGACAA 60.374 57.895 0.00 0.00 0.00 3.18
2470 2602 2.261361 CGCCACTGGATGACGACA 59.739 61.111 0.00 0.00 0.00 4.35
2471 2603 2.509336 CCGCCACTGGATGACGAC 60.509 66.667 0.00 0.00 0.00 4.34
2472 2604 2.678580 TCCGCCACTGGATGACGA 60.679 61.111 0.00 0.00 31.53 4.20
2473 2605 2.202797 CTCCGCCACTGGATGACG 60.203 66.667 0.00 0.00 37.41 4.35
2474 2606 2.512515 GCTCCGCCACTGGATGAC 60.513 66.667 0.00 0.00 37.41 3.06
2523 2655 1.145819 GTGAGATCCTGGGCAGAGC 59.854 63.158 0.00 0.00 0.00 4.09
2524 2656 1.129917 ATGTGAGATCCTGGGCAGAG 58.870 55.000 0.00 0.00 0.00 3.35
2525 2657 1.211212 CAATGTGAGATCCTGGGCAGA 59.789 52.381 0.00 0.00 0.00 4.26
2526 2658 1.211212 TCAATGTGAGATCCTGGGCAG 59.789 52.381 0.00 0.00 0.00 4.85
2527 2659 1.288188 TCAATGTGAGATCCTGGGCA 58.712 50.000 0.00 0.00 0.00 5.36
2528 2660 2.425143 TTCAATGTGAGATCCTGGGC 57.575 50.000 0.00 0.00 0.00 5.36
2529 2661 6.883217 CCTATAATTCAATGTGAGATCCTGGG 59.117 42.308 0.00 0.00 0.00 4.45
2530 2662 7.683578 TCCTATAATTCAATGTGAGATCCTGG 58.316 38.462 0.00 0.00 0.00 4.45
2531 2663 8.591940 TCTCCTATAATTCAATGTGAGATCCTG 58.408 37.037 0.00 0.00 0.00 3.86
2532 2664 8.733092 TCTCCTATAATTCAATGTGAGATCCT 57.267 34.615 0.00 0.00 0.00 3.24
2533 2665 9.381033 CATCTCCTATAATTCAATGTGAGATCC 57.619 37.037 0.00 0.00 36.48 3.36
2534 2666 9.381033 CCATCTCCTATAATTCAATGTGAGATC 57.619 37.037 0.00 0.00 36.48 2.75
2535 2667 9.109246 TCCATCTCCTATAATTCAATGTGAGAT 57.891 33.333 0.00 0.00 38.50 2.75
2536 2668 8.496534 TCCATCTCCTATAATTCAATGTGAGA 57.503 34.615 0.00 0.00 32.71 3.27
2537 2669 8.591940 TCTCCATCTCCTATAATTCAATGTGAG 58.408 37.037 0.00 0.00 0.00 3.51
2538 2670 8.496534 TCTCCATCTCCTATAATTCAATGTGA 57.503 34.615 0.00 0.00 0.00 3.58
2539 2671 9.736414 ATTCTCCATCTCCTATAATTCAATGTG 57.264 33.333 0.00 0.00 0.00 3.21
2550 2682 8.914213 ACTGATGATAATTCTCCATCTCCTAT 57.086 34.615 12.72 0.00 37.97 2.57
2551 2683 8.733092 AACTGATGATAATTCTCCATCTCCTA 57.267 34.615 12.72 0.00 37.97 2.94
2552 2684 7.630005 AACTGATGATAATTCTCCATCTCCT 57.370 36.000 12.72 0.26 37.97 3.69
2553 2685 8.688747 AAAACTGATGATAATTCTCCATCTCC 57.311 34.615 12.72 0.00 37.97 3.71
2557 2689 9.347240 CCACTAAAACTGATGATAATTCTCCAT 57.653 33.333 0.00 0.00 0.00 3.41
2558 2690 7.775093 CCCACTAAAACTGATGATAATTCTCCA 59.225 37.037 0.00 0.00 0.00 3.86
2559 2691 7.255277 GCCCACTAAAACTGATGATAATTCTCC 60.255 40.741 0.00 0.00 0.00 3.71
2560 2692 7.283127 TGCCCACTAAAACTGATGATAATTCTC 59.717 37.037 0.00 0.00 0.00 2.87
2561 2693 7.118723 TGCCCACTAAAACTGATGATAATTCT 58.881 34.615 0.00 0.00 0.00 2.40
2562 2694 7.333528 TGCCCACTAAAACTGATGATAATTC 57.666 36.000 0.00 0.00 0.00 2.17
2563 2695 7.716799 TTGCCCACTAAAACTGATGATAATT 57.283 32.000 0.00 0.00 0.00 1.40
2564 2696 7.716799 TTTGCCCACTAAAACTGATGATAAT 57.283 32.000 0.00 0.00 0.00 1.28
2565 2697 7.546358 CATTTGCCCACTAAAACTGATGATAA 58.454 34.615 0.00 0.00 0.00 1.75
2566 2698 6.405731 GCATTTGCCCACTAAAACTGATGATA 60.406 38.462 0.00 0.00 34.31 2.15
2567 2699 5.625197 GCATTTGCCCACTAAAACTGATGAT 60.625 40.000 0.00 0.00 34.31 2.45
2568 2700 4.321899 GCATTTGCCCACTAAAACTGATGA 60.322 41.667 0.00 0.00 34.31 2.92
2569 2701 3.928375 GCATTTGCCCACTAAAACTGATG 59.072 43.478 0.00 0.00 34.31 3.07
2570 2702 4.192429 GCATTTGCCCACTAAAACTGAT 57.808 40.909 0.00 0.00 34.31 2.90
2571 2703 3.658757 GCATTTGCCCACTAAAACTGA 57.341 42.857 0.00 0.00 34.31 3.41
2584 2716 0.321021 TGTGGTTCATGGGCATTTGC 59.679 50.000 0.00 0.00 41.14 3.68
2585 2717 2.419021 GGATGTGGTTCATGGGCATTTG 60.419 50.000 0.00 0.00 36.83 2.32
2586 2718 1.832998 GGATGTGGTTCATGGGCATTT 59.167 47.619 0.00 0.00 36.83 2.32
2587 2719 1.488390 GGATGTGGTTCATGGGCATT 58.512 50.000 0.00 0.00 36.83 3.56
2588 2720 0.397535 GGGATGTGGTTCATGGGCAT 60.398 55.000 0.00 0.00 36.83 4.40
2589 2721 1.000233 GGGATGTGGTTCATGGGCA 60.000 57.895 0.00 0.00 36.83 5.36
2590 2722 1.307647 AGGGATGTGGTTCATGGGC 59.692 57.895 0.00 0.00 36.83 5.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.