Multiple sequence alignment - TraesCS2B01G500600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G500600 chr2B 100.000 3584 0 0 1 3584 695888113 695891696 0.000000e+00 6619.0
1 TraesCS2B01G500600 chr2B 79.018 224 33 6 654 877 765854472 765854263 1.340000e-29 141.0
2 TraesCS2B01G500600 chr2B 85.455 110 9 4 770 877 177135284 177135388 1.360000e-19 108.0
3 TraesCS2B01G500600 chr2A 89.787 2722 191 32 877 3581 716499363 716502014 0.000000e+00 3406.0
4 TraesCS2B01G500600 chr2A 82.569 109 19 0 770 878 44391217 44391325 2.950000e-16 97.1
5 TraesCS2B01G500600 chr2A 85.507 69 9 1 654 722 44390887 44390954 1.790000e-08 71.3
6 TraesCS2B01G500600 chr2D 89.919 2708 180 35 877 3581 578962934 578965551 0.000000e+00 3402.0
7 TraesCS2B01G500600 chr2D 87.591 274 31 2 24 294 552108459 552108732 7.470000e-82 315.0
8 TraesCS2B01G500600 chr3A 81.354 1920 323 19 1055 2951 589792452 589794359 0.000000e+00 1530.0
9 TraesCS2B01G500600 chr3A 78.873 639 115 11 1730 2354 589613372 589614004 7.160000e-112 414.0
10 TraesCS2B01G500600 chr3A 78.191 188 27 4 690 877 696272443 696272270 1.360000e-19 108.0
11 TraesCS2B01G500600 chr3D 81.460 1877 317 15 1096 2951 448427992 448429858 0.000000e+00 1509.0
12 TraesCS2B01G500600 chr3B 81.489 1880 311 21 1096 2951 588471036 588472902 0.000000e+00 1509.0
13 TraesCS2B01G500600 chr3B 80.085 1406 250 17 1569 2951 588420650 588422048 0.000000e+00 1018.0
14 TraesCS2B01G500600 chr3B 89.831 295 25 3 4 294 312195486 312195193 1.220000e-99 374.0
15 TraesCS2B01G500600 chr3B 91.418 268 16 4 290 556 312195145 312194884 9.460000e-96 361.0
16 TraesCS2B01G500600 chr3B 82.174 230 24 12 653 880 312194834 312194620 7.900000e-42 182.0
17 TraesCS2B01G500600 chr3B 76.923 195 28 11 690 883 451358343 451358521 1.060000e-15 95.3
18 TraesCS2B01G500600 chr3B 76.720 189 30 5 690 878 397415406 397415580 3.810000e-15 93.5
19 TraesCS2B01G500600 chr1B 91.362 301 22 3 1 300 24136471 24136768 3.330000e-110 409.0
20 TraesCS2B01G500600 chr1B 90.795 239 20 2 289 526 24136812 24137049 5.770000e-83 318.0
21 TraesCS2B01G500600 chr7D 91.060 302 20 4 3 300 85028902 85029200 5.570000e-108 401.0
22 TraesCS2B01G500600 chr7D 86.111 108 15 0 770 877 635704509 635704616 2.260000e-22 117.0
23 TraesCS2B01G500600 chr6D 89.057 265 26 2 33 294 385713690 385713426 3.450000e-85 326.0
24 TraesCS2B01G500600 chr6D 88.800 250 21 4 308 556 385711874 385711631 2.090000e-77 300.0
25 TraesCS2B01G500600 chr6D 79.078 282 32 11 605 876 385711505 385711241 6.150000e-38 169.0
26 TraesCS2B01G500600 chr6D 100.000 30 0 0 847 876 159358819 159358848 5.000000e-04 56.5
27 TraesCS2B01G500600 chrUn 91.453 234 18 2 1 234 47530378 47530609 1.610000e-83 320.0
28 TraesCS2B01G500600 chrUn 96.552 87 1 1 404 490 47530778 47530862 3.730000e-30 143.0
29 TraesCS2B01G500600 chr4D 86.517 267 25 6 3 266 97387807 97387549 2.110000e-72 283.0
30 TraesCS2B01G500600 chr4D 79.333 450 42 23 3 438 379223791 379223379 5.900000e-68 268.0
31 TraesCS2B01G500600 chr4D 82.727 110 8 9 384 489 97387426 97387324 1.770000e-13 87.9
32 TraesCS2B01G500600 chr5D 94.167 120 6 1 1 119 3403605 3403486 7.900000e-42 182.0
33 TraesCS2B01G500600 chr5B 76.190 189 31 5 690 878 490729265 490729091 1.770000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G500600 chr2B 695888113 695891696 3583 False 6619.000000 6619 100.000000 1 3584 1 chr2B.!!$F2 3583
1 TraesCS2B01G500600 chr2A 716499363 716502014 2651 False 3406.000000 3406 89.787000 877 3581 1 chr2A.!!$F1 2704
2 TraesCS2B01G500600 chr2D 578962934 578965551 2617 False 3402.000000 3402 89.919000 877 3581 1 chr2D.!!$F2 2704
3 TraesCS2B01G500600 chr3A 589792452 589794359 1907 False 1530.000000 1530 81.354000 1055 2951 1 chr3A.!!$F2 1896
4 TraesCS2B01G500600 chr3A 589613372 589614004 632 False 414.000000 414 78.873000 1730 2354 1 chr3A.!!$F1 624
5 TraesCS2B01G500600 chr3D 448427992 448429858 1866 False 1509.000000 1509 81.460000 1096 2951 1 chr3D.!!$F1 1855
6 TraesCS2B01G500600 chr3B 588471036 588472902 1866 False 1509.000000 1509 81.489000 1096 2951 1 chr3B.!!$F4 1855
7 TraesCS2B01G500600 chr3B 588420650 588422048 1398 False 1018.000000 1018 80.085000 1569 2951 1 chr3B.!!$F3 1382
8 TraesCS2B01G500600 chr3B 312194620 312195486 866 True 305.666667 374 87.807667 4 880 3 chr3B.!!$R1 876
9 TraesCS2B01G500600 chr1B 24136471 24137049 578 False 363.500000 409 91.078500 1 526 2 chr1B.!!$F1 525
10 TraesCS2B01G500600 chr6D 385711241 385713690 2449 True 265.000000 326 85.645000 33 876 3 chr6D.!!$R1 843

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
568 2114 0.036765 GGGTGTCACGTGAATGCCTA 60.037 55.0 21.95 0.0 0.00 3.93 F
659 2205 0.177836 CACACATGAGTCCCCGCATA 59.822 55.0 0.00 0.0 29.27 3.14 F
702 2248 0.323725 GGAGGTGCCATGTGGATTGT 60.324 55.0 2.55 0.0 37.39 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2145 3705 1.300931 GCTGCACACCGACAAGAGA 60.301 57.895 0.0 0.0 0.00 3.10 R
2310 4003 2.596631 GCTGGCATGGGCATCGAT 60.597 61.111 0.0 0.0 43.71 3.59 R
2651 4345 3.265221 TGCCATTCATCTTCTCCTTGACT 59.735 43.478 0.0 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
130 135 0.647410 CGACTGACGATGTTGGATGC 59.353 55.000 0.00 0.00 45.77 3.91
197 202 0.250166 AACTAAACGCAGAAGCCGGT 60.250 50.000 1.90 0.00 37.52 5.28
202 207 2.434884 CGCAGAAGCCGGTCATGT 60.435 61.111 1.90 0.00 37.52 3.21
212 217 2.018542 CCGGTCATGTTACGGTGAAT 57.981 50.000 14.34 0.00 42.53 2.57
216 221 3.331150 GGTCATGTTACGGTGAATGACA 58.669 45.455 22.70 9.06 46.94 3.58
271 276 1.815421 ATGCGGCGGATGAAGACAC 60.815 57.895 14.62 0.00 0.00 3.67
272 277 2.434185 GCGGCGGATGAAGACACA 60.434 61.111 9.78 0.00 0.00 3.72
312 377 0.108377 CGACATGAACATCGACCCCA 60.108 55.000 0.00 0.00 40.86 4.96
317 1860 2.979814 TGAACATCGACCCCACATAG 57.020 50.000 0.00 0.00 0.00 2.23
325 1868 1.984288 GACCCCACATAGTGAGGCCC 61.984 65.000 0.00 0.00 34.68 5.80
330 1873 0.249120 CACATAGTGAGGCCCGACAA 59.751 55.000 0.00 0.00 35.23 3.18
346 1889 3.243771 CCGACAAAGACCTGAGTAAGTGT 60.244 47.826 0.00 0.00 0.00 3.55
465 2011 1.378531 TTTGCATGTACAGATCGGGC 58.621 50.000 0.33 0.00 0.00 6.13
481 2027 3.162666 TCGGGCTAACAAGAGAAAGAGA 58.837 45.455 0.00 0.00 0.00 3.10
520 2066 2.516923 GGCTAGCGCTGTATATACACG 58.483 52.381 22.90 22.54 35.44 4.49
524 2070 4.436986 GCTAGCGCTGTATATACACGATGA 60.437 45.833 27.20 16.45 34.80 2.92
525 2071 4.703645 AGCGCTGTATATACACGATGAT 57.296 40.909 27.20 14.66 34.80 2.45
526 2072 4.415735 AGCGCTGTATATACACGATGATG 58.584 43.478 27.20 13.64 34.80 3.07
527 2073 4.156008 AGCGCTGTATATACACGATGATGA 59.844 41.667 27.20 3.76 34.80 2.92
528 2074 5.037385 GCGCTGTATATACACGATGATGAT 58.963 41.667 27.20 0.00 34.80 2.45
529 2075 6.038271 AGCGCTGTATATACACGATGATGATA 59.962 38.462 27.20 2.78 34.80 2.15
530 2076 6.858478 GCGCTGTATATACACGATGATGATAT 59.142 38.462 27.20 0.00 34.80 1.63
531 2077 7.149063 GCGCTGTATATACACGATGATGATATG 60.149 40.741 27.20 11.50 34.80 1.78
532 2078 7.857885 CGCTGTATATACACGATGATGATATGT 59.142 37.037 22.46 0.00 34.80 2.29
533 2079 9.521503 GCTGTATATACACGATGATGATATGTT 57.478 33.333 11.62 0.00 31.93 2.71
542 2088 8.830580 ACACGATGATGATATGTTTAGAAAAGG 58.169 33.333 0.00 0.00 0.00 3.11
543 2089 8.830580 CACGATGATGATATGTTTAGAAAAGGT 58.169 33.333 0.00 0.00 0.00 3.50
544 2090 9.046296 ACGATGATGATATGTTTAGAAAAGGTC 57.954 33.333 0.00 0.00 0.00 3.85
545 2091 8.217115 CGATGATGATATGTTTAGAAAAGGTCG 58.783 37.037 0.00 0.00 0.00 4.79
546 2092 7.246674 TGATGATATGTTTAGAAAAGGTCGC 57.753 36.000 0.00 0.00 0.00 5.19
547 2093 6.821160 TGATGATATGTTTAGAAAAGGTCGCA 59.179 34.615 0.00 0.00 0.00 5.10
548 2094 6.417191 TGATATGTTTAGAAAAGGTCGCAC 57.583 37.500 0.00 0.00 0.00 5.34
549 2095 3.806316 ATGTTTAGAAAAGGTCGCACG 57.194 42.857 0.00 0.00 0.00 5.34
550 2096 1.868498 TGTTTAGAAAAGGTCGCACGG 59.132 47.619 0.00 0.00 0.00 4.94
551 2097 1.196127 GTTTAGAAAAGGTCGCACGGG 59.804 52.381 0.00 0.00 0.00 5.28
552 2098 0.393820 TTAGAAAAGGTCGCACGGGT 59.606 50.000 0.00 0.00 0.00 5.28
553 2099 0.320073 TAGAAAAGGTCGCACGGGTG 60.320 55.000 0.00 0.00 0.00 4.61
554 2100 1.890510 GAAAAGGTCGCACGGGTGT 60.891 57.895 0.00 0.00 0.00 4.16
555 2101 1.838568 GAAAAGGTCGCACGGGTGTC 61.839 60.000 0.00 0.00 0.00 3.67
556 2102 2.596553 AAAAGGTCGCACGGGTGTCA 62.597 55.000 0.00 0.00 0.00 3.58
557 2103 3.802418 AAGGTCGCACGGGTGTCAC 62.802 63.158 0.00 0.00 0.00 3.67
559 2105 4.936823 GTCGCACGGGTGTCACGT 62.937 66.667 0.00 0.00 46.82 4.49
564 2110 4.354155 ACGGGTGTCACGTGAATG 57.646 55.556 21.95 10.69 43.78 2.67
565 2111 1.959226 ACGGGTGTCACGTGAATGC 60.959 57.895 21.95 12.85 43.78 3.56
566 2112 2.677003 CGGGTGTCACGTGAATGCC 61.677 63.158 21.95 20.63 0.00 4.40
567 2113 1.302511 GGGTGTCACGTGAATGCCT 60.303 57.895 21.95 0.00 0.00 4.75
568 2114 0.036765 GGGTGTCACGTGAATGCCTA 60.037 55.000 21.95 0.00 0.00 3.93
569 2115 1.609580 GGGTGTCACGTGAATGCCTAA 60.610 52.381 21.95 0.00 0.00 2.69
570 2116 2.147958 GGTGTCACGTGAATGCCTAAA 58.852 47.619 21.95 0.00 0.00 1.85
571 2117 2.095919 GGTGTCACGTGAATGCCTAAAC 60.096 50.000 21.95 5.51 0.00 2.01
572 2118 2.546368 GTGTCACGTGAATGCCTAAACA 59.454 45.455 21.95 8.38 0.00 2.83
573 2119 3.002862 GTGTCACGTGAATGCCTAAACAA 59.997 43.478 21.95 0.00 0.00 2.83
574 2120 3.818210 TGTCACGTGAATGCCTAAACAAT 59.182 39.130 21.95 0.00 0.00 2.71
575 2121 4.158384 GTCACGTGAATGCCTAAACAATG 58.842 43.478 21.95 0.00 0.00 2.82
576 2122 3.818210 TCACGTGAATGCCTAAACAATGT 59.182 39.130 17.62 0.00 0.00 2.71
577 2123 4.998033 TCACGTGAATGCCTAAACAATGTA 59.002 37.500 17.62 0.00 0.00 2.29
578 2124 5.470437 TCACGTGAATGCCTAAACAATGTAA 59.530 36.000 17.62 0.00 0.00 2.41
579 2125 6.017026 TCACGTGAATGCCTAAACAATGTAAA 60.017 34.615 17.62 0.00 0.00 2.01
580 2126 6.638873 CACGTGAATGCCTAAACAATGTAAAA 59.361 34.615 10.90 0.00 0.00 1.52
581 2127 7.168302 CACGTGAATGCCTAAACAATGTAAAAA 59.832 33.333 10.90 0.00 0.00 1.94
582 2128 7.381139 ACGTGAATGCCTAAACAATGTAAAAAG 59.619 33.333 0.00 0.00 0.00 2.27
583 2129 7.148820 CGTGAATGCCTAAACAATGTAAAAAGG 60.149 37.037 0.00 0.00 0.00 3.11
584 2130 7.655732 GTGAATGCCTAAACAATGTAAAAAGGT 59.344 33.333 0.00 0.00 0.00 3.50
585 2131 8.207545 TGAATGCCTAAACAATGTAAAAAGGTT 58.792 29.630 0.00 0.00 0.00 3.50
586 2132 8.972458 AATGCCTAAACAATGTAAAAAGGTTT 57.028 26.923 0.00 0.00 35.93 3.27
587 2133 7.778470 TGCCTAAACAATGTAAAAAGGTTTG 57.222 32.000 0.00 0.00 34.00 2.93
588 2134 6.258947 TGCCTAAACAATGTAAAAAGGTTTGC 59.741 34.615 0.00 0.00 34.00 3.68
589 2135 6.481976 GCCTAAACAATGTAAAAAGGTTTGCT 59.518 34.615 0.00 0.00 34.00 3.91
590 2136 7.518211 GCCTAAACAATGTAAAAAGGTTTGCTG 60.518 37.037 0.00 0.00 34.00 4.41
591 2137 7.494298 CCTAAACAATGTAAAAAGGTTTGCTGT 59.506 33.333 0.00 0.00 34.00 4.40
592 2138 7.680442 AAACAATGTAAAAAGGTTTGCTGTT 57.320 28.000 0.00 0.00 32.71 3.16
593 2139 6.902224 ACAATGTAAAAAGGTTTGCTGTTC 57.098 33.333 0.00 0.00 31.23 3.18
594 2140 5.518487 ACAATGTAAAAAGGTTTGCTGTTCG 59.482 36.000 0.00 0.00 31.23 3.95
595 2141 4.966965 TGTAAAAAGGTTTGCTGTTCGA 57.033 36.364 0.00 0.00 31.23 3.71
596 2142 4.664188 TGTAAAAAGGTTTGCTGTTCGAC 58.336 39.130 0.00 0.00 31.23 4.20
597 2143 4.396790 TGTAAAAAGGTTTGCTGTTCGACT 59.603 37.500 0.00 0.00 31.23 4.18
598 2144 3.692791 AAAAGGTTTGCTGTTCGACTC 57.307 42.857 0.00 0.00 0.00 3.36
599 2145 2.622064 AAGGTTTGCTGTTCGACTCT 57.378 45.000 0.00 0.00 0.00 3.24
600 2146 2.156343 AGGTTTGCTGTTCGACTCTC 57.844 50.000 0.00 0.00 0.00 3.20
601 2147 1.149148 GGTTTGCTGTTCGACTCTCC 58.851 55.000 0.00 0.00 0.00 3.71
602 2148 1.540363 GGTTTGCTGTTCGACTCTCCA 60.540 52.381 0.00 0.00 0.00 3.86
603 2149 2.417719 GTTTGCTGTTCGACTCTCCAT 58.582 47.619 0.00 0.00 0.00 3.41
604 2150 2.084610 TTGCTGTTCGACTCTCCATG 57.915 50.000 0.00 0.00 0.00 3.66
605 2151 0.247460 TGCTGTTCGACTCTCCATGG 59.753 55.000 4.97 4.97 0.00 3.66
606 2152 0.460987 GCTGTTCGACTCTCCATGGG 60.461 60.000 13.02 2.57 0.00 4.00
607 2153 0.898320 CTGTTCGACTCTCCATGGGT 59.102 55.000 13.02 1.05 0.00 4.51
608 2154 2.100197 CTGTTCGACTCTCCATGGGTA 58.900 52.381 13.02 0.00 0.00 3.69
609 2155 1.822990 TGTTCGACTCTCCATGGGTAC 59.177 52.381 13.02 0.00 0.00 3.34
610 2156 1.822990 GTTCGACTCTCCATGGGTACA 59.177 52.381 13.02 0.00 0.00 2.90
611 2157 2.431057 GTTCGACTCTCCATGGGTACAT 59.569 50.000 13.02 0.00 37.99 2.29
612 2158 3.588210 TCGACTCTCCATGGGTACATA 57.412 47.619 13.02 0.00 34.99 2.29
613 2159 4.114015 TCGACTCTCCATGGGTACATAT 57.886 45.455 13.02 0.00 34.99 1.78
614 2160 4.480115 TCGACTCTCCATGGGTACATATT 58.520 43.478 13.02 0.00 34.99 1.28
615 2161 4.899457 TCGACTCTCCATGGGTACATATTT 59.101 41.667 13.02 0.00 34.99 1.40
616 2162 5.365605 TCGACTCTCCATGGGTACATATTTT 59.634 40.000 13.02 0.00 34.99 1.82
617 2163 6.055588 CGACTCTCCATGGGTACATATTTTT 58.944 40.000 13.02 0.00 34.99 1.94
618 2164 7.070198 TCGACTCTCCATGGGTACATATTTTTA 59.930 37.037 13.02 0.00 34.99 1.52
619 2165 7.878127 CGACTCTCCATGGGTACATATTTTTAT 59.122 37.037 13.02 0.00 34.99 1.40
620 2166 9.574516 GACTCTCCATGGGTACATATTTTTATT 57.425 33.333 13.02 0.00 34.99 1.40
621 2167 9.936329 ACTCTCCATGGGTACATATTTTTATTT 57.064 29.630 13.02 0.00 34.99 1.40
624 2170 9.981114 CTCCATGGGTACATATTTTTATTTTCC 57.019 33.333 13.02 0.00 34.99 3.13
625 2171 9.494055 TCCATGGGTACATATTTTTATTTTCCA 57.506 29.630 13.02 0.00 34.99 3.53
626 2172 9.541143 CCATGGGTACATATTTTTATTTTCCAC 57.459 33.333 2.85 0.00 34.99 4.02
649 2195 3.961477 TTTTTCGTCCACACACATGAG 57.039 42.857 0.00 0.00 0.00 2.90
650 2196 2.613026 TTTCGTCCACACACATGAGT 57.387 45.000 0.00 0.00 0.00 3.41
651 2197 2.148916 TTCGTCCACACACATGAGTC 57.851 50.000 0.00 0.00 0.00 3.36
652 2198 0.317160 TCGTCCACACACATGAGTCC 59.683 55.000 0.00 0.00 0.00 3.85
653 2199 0.670546 CGTCCACACACATGAGTCCC 60.671 60.000 0.00 0.00 0.00 4.46
654 2200 0.321653 GTCCACACACATGAGTCCCC 60.322 60.000 0.00 0.00 0.00 4.81
655 2201 1.375908 CCACACACATGAGTCCCCG 60.376 63.158 0.00 0.00 0.00 5.73
656 2202 2.034879 CACACACATGAGTCCCCGC 61.035 63.158 0.00 0.00 0.00 6.13
657 2203 2.347114 CACACATGAGTCCCCGCA 59.653 61.111 0.00 0.00 0.00 5.69
658 2204 1.078214 CACACATGAGTCCCCGCAT 60.078 57.895 0.00 0.00 0.00 4.73
659 2205 0.177836 CACACATGAGTCCCCGCATA 59.822 55.000 0.00 0.00 29.27 3.14
660 2206 0.465705 ACACATGAGTCCCCGCATAG 59.534 55.000 0.00 0.00 29.27 2.23
661 2207 0.752658 CACATGAGTCCCCGCATAGA 59.247 55.000 0.00 0.00 29.27 1.98
662 2208 1.345741 CACATGAGTCCCCGCATAGAT 59.654 52.381 0.00 0.00 29.27 1.98
663 2209 2.562738 CACATGAGTCCCCGCATAGATA 59.437 50.000 0.00 0.00 29.27 1.98
664 2210 2.828520 ACATGAGTCCCCGCATAGATAG 59.171 50.000 0.00 0.00 29.27 2.08
665 2211 2.971901 TGAGTCCCCGCATAGATAGA 57.028 50.000 0.00 0.00 0.00 1.98
666 2212 2.796557 TGAGTCCCCGCATAGATAGAG 58.203 52.381 0.00 0.00 0.00 2.43
667 2213 2.375509 TGAGTCCCCGCATAGATAGAGA 59.624 50.000 0.00 0.00 0.00 3.10
668 2214 3.013921 GAGTCCCCGCATAGATAGAGAG 58.986 54.545 0.00 0.00 0.00 3.20
669 2215 2.645297 AGTCCCCGCATAGATAGAGAGA 59.355 50.000 0.00 0.00 0.00 3.10
670 2216 3.013921 GTCCCCGCATAGATAGAGAGAG 58.986 54.545 0.00 0.00 0.00 3.20
671 2217 2.913617 TCCCCGCATAGATAGAGAGAGA 59.086 50.000 0.00 0.00 0.00 3.10
672 2218 3.330998 TCCCCGCATAGATAGAGAGAGAA 59.669 47.826 0.00 0.00 0.00 2.87
673 2219 4.082845 CCCCGCATAGATAGAGAGAGAAA 58.917 47.826 0.00 0.00 0.00 2.52
674 2220 4.524714 CCCCGCATAGATAGAGAGAGAAAA 59.475 45.833 0.00 0.00 0.00 2.29
675 2221 5.465935 CCCGCATAGATAGAGAGAGAAAAC 58.534 45.833 0.00 0.00 0.00 2.43
676 2222 5.010112 CCCGCATAGATAGAGAGAGAAAACA 59.990 44.000 0.00 0.00 0.00 2.83
677 2223 6.461648 CCCGCATAGATAGAGAGAGAAAACAA 60.462 42.308 0.00 0.00 0.00 2.83
678 2224 6.640499 CCGCATAGATAGAGAGAGAAAACAAG 59.360 42.308 0.00 0.00 0.00 3.16
679 2225 6.143758 CGCATAGATAGAGAGAGAAAACAAGC 59.856 42.308 0.00 0.00 0.00 4.01
680 2226 7.209475 GCATAGATAGAGAGAGAAAACAAGCT 58.791 38.462 0.00 0.00 0.00 3.74
681 2227 7.169645 GCATAGATAGAGAGAGAAAACAAGCTG 59.830 40.741 0.00 0.00 0.00 4.24
682 2228 5.976458 AGATAGAGAGAGAAAACAAGCTGG 58.024 41.667 0.00 0.00 0.00 4.85
683 2229 3.415457 AGAGAGAGAAAACAAGCTGGG 57.585 47.619 0.00 0.00 0.00 4.45
684 2230 2.039613 AGAGAGAGAAAACAAGCTGGGG 59.960 50.000 0.00 0.00 0.00 4.96
685 2231 2.039084 GAGAGAGAAAACAAGCTGGGGA 59.961 50.000 0.00 0.00 0.00 4.81
686 2232 2.039613 AGAGAGAAAACAAGCTGGGGAG 59.960 50.000 0.00 0.00 0.00 4.30
687 2233 1.074566 AGAGAAAACAAGCTGGGGAGG 59.925 52.381 0.00 0.00 0.00 4.30
688 2234 0.853530 AGAAAACAAGCTGGGGAGGT 59.146 50.000 0.00 0.00 0.00 3.85
689 2235 0.961753 GAAAACAAGCTGGGGAGGTG 59.038 55.000 0.00 0.00 0.00 4.00
690 2236 1.115326 AAAACAAGCTGGGGAGGTGC 61.115 55.000 0.00 0.00 0.00 5.01
691 2237 3.513750 AACAAGCTGGGGAGGTGCC 62.514 63.158 0.00 0.00 0.00 5.01
692 2238 3.970410 CAAGCTGGGGAGGTGCCA 61.970 66.667 0.00 0.00 38.95 4.92
693 2239 2.943265 AAGCTGGGGAGGTGCCAT 60.943 61.111 0.00 0.00 38.95 4.40
694 2240 3.292481 AAGCTGGGGAGGTGCCATG 62.292 63.158 0.00 0.00 38.95 3.66
695 2241 4.052518 GCTGGGGAGGTGCCATGT 62.053 66.667 0.00 0.00 38.95 3.21
696 2242 2.044650 CTGGGGAGGTGCCATGTG 60.045 66.667 0.00 0.00 38.95 3.21
697 2243 3.650298 CTGGGGAGGTGCCATGTGG 62.650 68.421 0.00 0.00 38.95 4.17
698 2244 3.338250 GGGGAGGTGCCATGTGGA 61.338 66.667 2.55 0.00 38.95 4.02
699 2245 2.693871 GGGGAGGTGCCATGTGGAT 61.694 63.158 2.55 0.00 38.95 3.41
700 2246 1.307647 GGGAGGTGCCATGTGGATT 59.692 57.895 2.55 0.00 38.95 3.01
701 2247 1.039233 GGGAGGTGCCATGTGGATTG 61.039 60.000 2.55 0.00 38.95 2.67
702 2248 0.323725 GGAGGTGCCATGTGGATTGT 60.324 55.000 2.55 0.00 37.39 2.71
703 2249 1.549203 GAGGTGCCATGTGGATTGTT 58.451 50.000 2.55 0.00 37.39 2.83
704 2250 1.895131 GAGGTGCCATGTGGATTGTTT 59.105 47.619 2.55 0.00 37.39 2.83
705 2251 1.619827 AGGTGCCATGTGGATTGTTTG 59.380 47.619 2.55 0.00 37.39 2.93
706 2252 1.617850 GGTGCCATGTGGATTGTTTGA 59.382 47.619 2.55 0.00 37.39 2.69
707 2253 2.610232 GGTGCCATGTGGATTGTTTGAC 60.610 50.000 2.55 0.00 37.39 3.18
708 2254 1.617850 TGCCATGTGGATTGTTTGACC 59.382 47.619 2.55 0.00 37.39 4.02
709 2255 1.617850 GCCATGTGGATTGTTTGACCA 59.382 47.619 2.55 0.00 37.39 4.02
710 2256 2.353011 GCCATGTGGATTGTTTGACCAG 60.353 50.000 2.55 0.00 37.39 4.00
711 2257 2.892852 CCATGTGGATTGTTTGACCAGT 59.107 45.455 0.00 0.00 37.39 4.00
712 2258 3.057315 CCATGTGGATTGTTTGACCAGTC 60.057 47.826 0.00 0.00 37.39 3.51
713 2259 3.289407 TGTGGATTGTTTGACCAGTCA 57.711 42.857 0.00 0.00 37.91 3.41
714 2260 3.625853 TGTGGATTGTTTGACCAGTCAA 58.374 40.909 9.12 9.12 46.72 3.18
715 2261 8.353282 CCATGTGGATTGTTTGACCAGTCAAA 62.353 42.308 19.36 19.36 45.80 2.69
728 2274 8.681486 TTGACCAGTCAAATAGATGGAATATG 57.319 34.615 10.71 0.00 45.56 1.78
729 2275 8.033178 TGACCAGTCAAATAGATGGAATATGA 57.967 34.615 0.00 0.00 36.53 2.15
730 2276 8.493607 TGACCAGTCAAATAGATGGAATATGAA 58.506 33.333 0.00 0.00 36.53 2.57
731 2277 9.342308 GACCAGTCAAATAGATGGAATATGAAA 57.658 33.333 0.00 0.00 36.62 2.69
732 2278 9.125026 ACCAGTCAAATAGATGGAATATGAAAC 57.875 33.333 0.00 0.00 36.62 2.78
733 2279 9.347240 CCAGTCAAATAGATGGAATATGAAACT 57.653 33.333 0.00 0.00 34.60 2.66
765 2311 9.988815 ATCTAACAATGACTGTATAATCACCTC 57.011 33.333 0.00 0.00 37.23 3.85
766 2312 8.977412 TCTAACAATGACTGTATAATCACCTCA 58.023 33.333 0.00 0.00 37.23 3.86
767 2313 9.599866 CTAACAATGACTGTATAATCACCTCAA 57.400 33.333 0.00 0.00 37.23 3.02
768 2314 7.849804 ACAATGACTGTATAATCACCTCAAC 57.150 36.000 0.00 0.00 36.10 3.18
769 2315 7.394016 ACAATGACTGTATAATCACCTCAACA 58.606 34.615 0.00 0.00 36.10 3.33
770 2316 8.049117 ACAATGACTGTATAATCACCTCAACAT 58.951 33.333 0.00 0.00 36.10 2.71
771 2317 9.546428 CAATGACTGTATAATCACCTCAACATA 57.454 33.333 0.00 0.00 0.00 2.29
774 2320 9.764363 TGACTGTATAATCACCTCAACATAATC 57.236 33.333 0.00 0.00 0.00 1.75
775 2321 9.764363 GACTGTATAATCACCTCAACATAATCA 57.236 33.333 0.00 0.00 0.00 2.57
776 2322 9.547753 ACTGTATAATCACCTCAACATAATCAC 57.452 33.333 0.00 0.00 0.00 3.06
777 2323 8.902540 TGTATAATCACCTCAACATAATCACC 57.097 34.615 0.00 0.00 0.00 4.02
778 2324 8.713971 TGTATAATCACCTCAACATAATCACCT 58.286 33.333 0.00 0.00 0.00 4.00
779 2325 9.209175 GTATAATCACCTCAACATAATCACCTC 57.791 37.037 0.00 0.00 0.00 3.85
780 2326 5.698741 ATCACCTCAACATAATCACCTCA 57.301 39.130 0.00 0.00 0.00 3.86
781 2327 5.497464 TCACCTCAACATAATCACCTCAA 57.503 39.130 0.00 0.00 0.00 3.02
782 2328 5.245531 TCACCTCAACATAATCACCTCAAC 58.754 41.667 0.00 0.00 0.00 3.18
783 2329 5.003160 CACCTCAACATAATCACCTCAACA 58.997 41.667 0.00 0.00 0.00 3.33
784 2330 5.003804 ACCTCAACATAATCACCTCAACAC 58.996 41.667 0.00 0.00 0.00 3.32
785 2331 4.093408 CCTCAACATAATCACCTCAACACG 59.907 45.833 0.00 0.00 0.00 4.49
786 2332 4.637276 TCAACATAATCACCTCAACACGT 58.363 39.130 0.00 0.00 0.00 4.49
787 2333 5.785243 TCAACATAATCACCTCAACACGTA 58.215 37.500 0.00 0.00 0.00 3.57
788 2334 6.403049 TCAACATAATCACCTCAACACGTAT 58.597 36.000 0.00 0.00 0.00 3.06
789 2335 7.548967 TCAACATAATCACCTCAACACGTATA 58.451 34.615 0.00 0.00 0.00 1.47
790 2336 8.201464 TCAACATAATCACCTCAACACGTATAT 58.799 33.333 0.00 0.00 0.00 0.86
791 2337 9.471084 CAACATAATCACCTCAACACGTATATA 57.529 33.333 0.00 0.00 0.00 0.86
792 2338 9.692749 AACATAATCACCTCAACACGTATATAG 57.307 33.333 0.00 0.00 0.00 1.31
793 2339 8.857098 ACATAATCACCTCAACACGTATATAGT 58.143 33.333 0.00 0.00 0.00 2.12
794 2340 9.129209 CATAATCACCTCAACACGTATATAGTG 57.871 37.037 9.03 9.03 44.57 2.74
795 2341 6.954487 ATCACCTCAACACGTATATAGTGA 57.046 37.500 15.37 8.36 41.83 3.41
796 2342 6.954487 TCACCTCAACACGTATATAGTGAT 57.046 37.500 15.37 3.96 41.83 3.06
797 2343 6.967135 TCACCTCAACACGTATATAGTGATC 58.033 40.000 15.37 0.00 41.83 2.92
798 2344 5.851703 CACCTCAACACGTATATAGTGATCG 59.148 44.000 15.37 4.36 41.83 3.69
799 2345 5.530171 ACCTCAACACGTATATAGTGATCGT 59.470 40.000 15.37 4.89 41.83 3.73
800 2346 6.707608 ACCTCAACACGTATATAGTGATCGTA 59.292 38.462 15.37 0.00 41.83 3.43
801 2347 7.227314 ACCTCAACACGTATATAGTGATCGTAA 59.773 37.037 15.37 0.00 41.83 3.18
802 2348 8.235226 CCTCAACACGTATATAGTGATCGTAAT 58.765 37.037 15.37 0.00 41.83 1.89
817 2363 9.737427 AGTGATCGTAATAACTGTATTCTGAAG 57.263 33.333 0.00 0.00 32.10 3.02
818 2364 9.517609 GTGATCGTAATAACTGTATTCTGAAGT 57.482 33.333 0.00 0.00 32.10 3.01
828 2374 6.025749 CTGTATTCTGAAGTACAGTGACCA 57.974 41.667 20.15 0.00 45.86 4.02
829 2375 6.413783 TGTATTCTGAAGTACAGTGACCAA 57.586 37.500 0.00 0.00 45.86 3.67
830 2376 6.822442 TGTATTCTGAAGTACAGTGACCAAA 58.178 36.000 0.00 0.00 45.86 3.28
831 2377 7.276658 TGTATTCTGAAGTACAGTGACCAAAA 58.723 34.615 0.00 0.00 45.86 2.44
832 2378 7.936847 TGTATTCTGAAGTACAGTGACCAAAAT 59.063 33.333 0.00 0.00 45.86 1.82
833 2379 9.431887 GTATTCTGAAGTACAGTGACCAAAATA 57.568 33.333 0.00 0.00 45.86 1.40
834 2380 8.918202 ATTCTGAAGTACAGTGACCAAAATAA 57.082 30.769 0.00 0.00 45.86 1.40
835 2381 7.962964 TCTGAAGTACAGTGACCAAAATAAG 57.037 36.000 0.00 0.00 45.86 1.73
836 2382 6.426937 TCTGAAGTACAGTGACCAAAATAAGC 59.573 38.462 0.00 0.00 45.86 3.09
837 2383 5.178623 TGAAGTACAGTGACCAAAATAAGCG 59.821 40.000 0.00 0.00 0.00 4.68
838 2384 4.638304 AGTACAGTGACCAAAATAAGCGT 58.362 39.130 0.00 0.00 0.00 5.07
839 2385 5.786311 AGTACAGTGACCAAAATAAGCGTA 58.214 37.500 0.00 0.00 0.00 4.42
840 2386 5.636543 AGTACAGTGACCAAAATAAGCGTAC 59.363 40.000 0.00 0.00 0.00 3.67
841 2387 3.430895 ACAGTGACCAAAATAAGCGTACG 59.569 43.478 11.84 11.84 0.00 3.67
842 2388 2.414138 AGTGACCAAAATAAGCGTACGC 59.586 45.455 32.17 32.17 42.33 4.42
855 2401 3.021355 GCGTACGCTACAAGTTCAATG 57.979 47.619 31.95 0.00 38.26 2.82
856 2402 2.664568 GCGTACGCTACAAGTTCAATGA 59.335 45.455 31.95 0.00 38.26 2.57
857 2403 3.306166 GCGTACGCTACAAGTTCAATGAT 59.694 43.478 31.95 0.00 38.26 2.45
858 2404 4.548346 GCGTACGCTACAAGTTCAATGATC 60.548 45.833 31.95 0.00 38.26 2.92
859 2405 4.561213 CGTACGCTACAAGTTCAATGATCA 59.439 41.667 0.52 0.00 0.00 2.92
860 2406 5.232202 CGTACGCTACAAGTTCAATGATCAT 59.768 40.000 0.52 1.18 0.00 2.45
861 2407 5.725110 ACGCTACAAGTTCAATGATCATC 57.275 39.130 9.06 0.00 0.00 2.92
862 2408 5.178061 ACGCTACAAGTTCAATGATCATCA 58.822 37.500 9.06 0.00 0.00 3.07
863 2409 5.292834 ACGCTACAAGTTCAATGATCATCAG 59.707 40.000 9.06 5.23 0.00 2.90
864 2410 5.292834 CGCTACAAGTTCAATGATCATCAGT 59.707 40.000 9.06 2.66 0.00 3.41
865 2411 6.484540 GCTACAAGTTCAATGATCATCAGTG 58.515 40.000 8.88 8.88 43.13 3.66
866 2412 5.306532 ACAAGTTCAATGATCATCAGTGC 57.693 39.130 10.33 0.00 41.70 4.40
867 2413 4.763279 ACAAGTTCAATGATCATCAGTGCA 59.237 37.500 10.33 0.00 41.70 4.57
868 2414 5.417894 ACAAGTTCAATGATCATCAGTGCAT 59.582 36.000 10.33 0.00 41.70 3.96
869 2415 6.071560 ACAAGTTCAATGATCATCAGTGCATT 60.072 34.615 10.33 2.35 41.70 3.56
870 2416 6.525578 AGTTCAATGATCATCAGTGCATTT 57.474 33.333 10.33 0.00 41.70 2.32
871 2417 6.931838 AGTTCAATGATCATCAGTGCATTTT 58.068 32.000 10.33 0.00 41.70 1.82
872 2418 8.058667 AGTTCAATGATCATCAGTGCATTTTA 57.941 30.769 10.33 0.00 41.70 1.52
873 2419 7.972277 AGTTCAATGATCATCAGTGCATTTTAC 59.028 33.333 10.33 2.22 41.70 2.01
874 2420 7.634671 TCAATGATCATCAGTGCATTTTACT 57.365 32.000 10.33 0.00 41.70 2.24
875 2421 7.700505 TCAATGATCATCAGTGCATTTTACTC 58.299 34.615 10.33 0.00 41.70 2.59
912 2458 7.363205 ACACACCATTTTTCTGAAACTTTTG 57.637 32.000 1.58 0.21 0.00 2.44
954 2505 3.883462 CGCATTCGTGTAGCCCAA 58.117 55.556 0.00 0.00 0.00 4.12
975 2526 2.983592 CTGACAAACCGGCCCCAC 60.984 66.667 0.00 0.00 0.00 4.61
1005 2556 4.894201 GCTACATGCCTCATGCCT 57.106 55.556 6.71 0.00 44.80 4.75
1032 2583 3.953775 CCACCTCCGCACCCAACT 61.954 66.667 0.00 0.00 0.00 3.16
1090 2641 3.505184 CCGGCGAATTTGACCCCG 61.505 66.667 9.30 0.00 38.71 5.73
1094 2645 2.744709 CGAATTTGACCCCGCCGT 60.745 61.111 0.00 0.00 0.00 5.68
1315 2866 3.129502 CCGACGCGTACCTCCTCA 61.130 66.667 13.97 0.00 0.00 3.86
1338 2889 1.098869 CGCTGCTCTCTTCCTACTCA 58.901 55.000 0.00 0.00 0.00 3.41
1487 3038 1.078214 CCTGCTTCGCCATCTTCCA 60.078 57.895 0.00 0.00 0.00 3.53
1491 3042 1.079127 CTTCGCCATCTTCCACCGT 60.079 57.895 0.00 0.00 0.00 4.83
1552 3103 2.036098 TCCTGGCGTTACTCCCGA 59.964 61.111 0.00 0.00 0.00 5.14
1554 3105 2.348888 CCTGGCGTTACTCCCGACT 61.349 63.158 0.00 0.00 33.49 4.18
1675 3226 4.030452 GCAACGCCGCTCTTGCTT 62.030 61.111 12.97 0.00 39.79 3.91
1761 3312 0.606401 CCCACGCACAGAATGGTCTT 60.606 55.000 0.00 0.00 43.62 3.01
2026 3586 2.519771 AATGCCCAAGAAGAGCATCA 57.480 45.000 0.00 0.00 46.17 3.07
2145 3705 1.867233 GATAATGTCGCAATGGTCGCT 59.133 47.619 0.00 0.00 0.00 4.93
2156 3716 1.251527 ATGGTCGCTCTCTTGTCGGT 61.252 55.000 0.00 0.00 0.00 4.69
2222 3782 1.065926 TGCAATGGAGAGCACCTACAG 60.066 52.381 0.00 0.00 39.56 2.74
2651 4345 5.122869 GCTTGTGATTGAACTTGAGCAGATA 59.877 40.000 0.00 0.00 0.00 1.98
2806 4519 4.999311 TGTTGAGATTGTGGTGATGAAGAG 59.001 41.667 0.00 0.00 0.00 2.85
2816 4529 0.907486 TGATGAAGAGCCTGAGGGTG 59.093 55.000 8.45 0.00 31.55 4.61
2817 4530 0.908198 GATGAAGAGCCTGAGGGTGT 59.092 55.000 8.45 0.00 31.55 4.16
2839 4552 4.324991 GGGGACGGCCACTCGTTT 62.325 66.667 11.00 0.00 43.96 3.60
2866 4579 1.927487 TGGTCTCTGCAATTGCCAAT 58.073 45.000 26.94 0.00 41.18 3.16
2885 4598 1.420430 TCGGGTGTTTCTCTTCAGGT 58.580 50.000 0.00 0.00 0.00 4.00
2901 4614 1.936547 CAGGTATTCGAGCTGCTTTCC 59.063 52.381 2.53 0.00 46.16 3.13
2908 4621 1.294659 CGAGCTGCTTTCCTCGCTTT 61.295 55.000 2.53 0.00 43.49 3.51
2935 4648 0.679002 GAGCATGCTCCTGCCAAGAA 60.679 55.000 33.31 0.00 43.33 2.52
2955 4668 8.571336 CCAAGAATACTGGTGAATAATTGGATC 58.429 37.037 0.00 0.00 36.42 3.36
2956 4669 7.969536 AGAATACTGGTGAATAATTGGATCG 57.030 36.000 0.00 0.00 0.00 3.69
2957 4670 7.735917 AGAATACTGGTGAATAATTGGATCGA 58.264 34.615 0.00 0.00 0.00 3.59
2979 4692 1.243342 CCGCATTGTGAAGGAAGGCA 61.243 55.000 0.00 0.00 30.56 4.75
2980 4693 0.813184 CGCATTGTGAAGGAAGGCAT 59.187 50.000 0.00 0.00 30.56 4.40
2981 4694 1.203052 CGCATTGTGAAGGAAGGCATT 59.797 47.619 0.00 0.00 30.56 3.56
2982 4695 2.423185 CGCATTGTGAAGGAAGGCATTA 59.577 45.455 0.00 0.00 30.56 1.90
2983 4696 3.488047 CGCATTGTGAAGGAAGGCATTAG 60.488 47.826 0.00 0.00 30.56 1.73
2984 4697 3.736126 GCATTGTGAAGGAAGGCATTAGC 60.736 47.826 0.00 0.00 41.10 3.09
2985 4698 3.439857 TTGTGAAGGAAGGCATTAGCT 57.560 42.857 0.00 0.00 41.70 3.32
2986 4699 2.991250 TGTGAAGGAAGGCATTAGCTC 58.009 47.619 0.00 0.00 41.70 4.09
2987 4700 2.305635 TGTGAAGGAAGGCATTAGCTCA 59.694 45.455 0.00 0.00 41.70 4.26
3015 4728 2.549926 GTTGCACCAGAAACCAAAAGG 58.450 47.619 0.00 0.00 0.00 3.11
3021 4734 4.559153 CACCAGAAACCAAAAGGCATTAG 58.441 43.478 0.00 0.00 0.00 1.73
3025 4738 6.156519 CCAGAAACCAAAAGGCATTAGTTAC 58.843 40.000 0.00 0.00 0.00 2.50
3028 4741 4.783764 ACCAAAAGGCATTAGTTACAGC 57.216 40.909 0.00 0.00 0.00 4.40
3030 4743 5.566469 ACCAAAAGGCATTAGTTACAGCTA 58.434 37.500 0.00 0.00 0.00 3.32
3036 4749 6.163135 AGGCATTAGTTACAGCTAGTAAGG 57.837 41.667 8.44 0.77 43.06 2.69
3075 4788 4.877282 TCATCTGTACGACATGAAACACA 58.123 39.130 0.00 0.00 0.00 3.72
3080 4793 3.558006 TGTACGACATGAAACACACTTGG 59.442 43.478 0.00 0.00 0.00 3.61
3105 4818 9.685828 GGTTGCTGAAAATTACAACACTAATAA 57.314 29.630 7.00 0.00 43.23 1.40
3130 4843 8.871629 ATATCATGTAGTACTACTTAGCTGCT 57.128 34.615 28.56 7.57 37.00 4.24
3131 4844 9.961264 ATATCATGTAGTACTACTTAGCTGCTA 57.039 33.333 28.56 5.02 37.00 3.49
3139 4852 5.063017 ACTACTTAGCTGCTAGTATGGGA 57.937 43.478 9.62 0.00 0.00 4.37
3140 4853 5.074115 ACTACTTAGCTGCTAGTATGGGAG 58.926 45.833 9.62 5.22 38.30 4.30
3149 4862 3.834813 TGCTAGTATGGGAGCATTAGAGG 59.165 47.826 0.00 0.00 43.64 3.69
3159 4872 3.549794 GAGCATTAGAGGCTGGACAAAT 58.450 45.455 0.00 0.00 42.78 2.32
3182 4895 0.542938 AGCAGAGACAGCCAGTACCA 60.543 55.000 0.00 0.00 0.00 3.25
3207 4920 6.276091 TCATACTGTGATGCTCAACTATGTC 58.724 40.000 0.00 0.00 0.00 3.06
3213 4926 6.175471 TGTGATGCTCAACTATGTCAAGATT 58.825 36.000 0.00 0.00 0.00 2.40
3216 4930 4.264253 TGCTCAACTATGTCAAGATTGGG 58.736 43.478 0.00 0.00 0.00 4.12
3220 4934 6.620877 TCAACTATGTCAAGATTGGGTACT 57.379 37.500 0.00 0.00 0.00 2.73
3231 4945 4.770795 AGATTGGGTACTATGTGTTGAGC 58.229 43.478 0.00 0.00 0.00 4.26
3238 4952 3.059352 ACTATGTGTTGAGCAGAACCC 57.941 47.619 0.00 0.00 0.00 4.11
3253 4967 0.250513 AACCCGAGGTTCAGATCTGC 59.749 55.000 18.36 4.80 43.05 4.26
3254 4968 1.144936 CCCGAGGTTCAGATCTGCC 59.855 63.158 18.36 14.03 0.00 4.85
3258 4972 0.179097 GAGGTTCAGATCTGCCGACC 60.179 60.000 23.97 23.97 0.00 4.79
3276 4990 0.257039 CCCTTGTCCTAATGCTGGCT 59.743 55.000 0.00 0.00 0.00 4.75
3323 5037 1.906574 CCCTACAGGCTGGTCTTGTAA 59.093 52.381 20.34 0.00 0.00 2.41
3327 5041 2.269940 ACAGGCTGGTCTTGTAATCCT 58.730 47.619 20.34 0.00 0.00 3.24
3344 5059 1.911357 TCCTGAGTGGATGCTGAATGT 59.089 47.619 0.00 0.00 40.56 2.71
3345 5060 2.306805 TCCTGAGTGGATGCTGAATGTT 59.693 45.455 0.00 0.00 40.56 2.71
3350 5065 3.021695 AGTGGATGCTGAATGTTCCATG 58.978 45.455 0.00 0.00 40.22 3.66
3354 5069 2.951457 TGCTGAATGTTCCATGCATG 57.049 45.000 20.19 20.19 0.00 4.06
3366 5081 1.551430 CCATGCATGTGGTTCAATGGT 59.449 47.619 24.58 0.00 34.46 3.55
3381 5096 8.519526 TGGTTCAATGGTTGATAACTAATTGTC 58.480 33.333 14.35 11.01 39.84 3.18
3385 5100 7.279981 TCAATGGTTGATAACTAATTGTCGAGG 59.720 37.037 14.35 0.00 37.05 4.63
3390 5105 6.097915 TGATAACTAATTGTCGAGGATCCC 57.902 41.667 8.55 0.00 0.00 3.85
3391 5106 3.840124 AACTAATTGTCGAGGATCCCC 57.160 47.619 8.55 0.00 0.00 4.81
3395 5110 2.938956 ATTGTCGAGGATCCCCATTC 57.061 50.000 8.55 0.00 33.88 2.67
3402 5117 1.064824 AGGATCCCCATTCCAGAGGC 61.065 60.000 8.55 0.00 35.59 4.70
3421 5136 2.543653 GGCGTGACAAGTGCAGATTTTT 60.544 45.455 0.00 0.00 0.00 1.94
3423 5138 3.908382 GCGTGACAAGTGCAGATTTTTAG 59.092 43.478 0.00 0.00 0.00 1.85
3425 5140 4.229876 GTGACAAGTGCAGATTTTTAGCC 58.770 43.478 0.00 0.00 0.00 3.93
3426 5141 3.888323 TGACAAGTGCAGATTTTTAGCCA 59.112 39.130 0.00 0.00 0.00 4.75
3428 5143 5.163468 TGACAAGTGCAGATTTTTAGCCAAA 60.163 36.000 0.00 0.00 0.00 3.28
3430 5145 4.525912 AGTGCAGATTTTTAGCCAAAGG 57.474 40.909 0.00 0.00 0.00 3.11
3431 5146 3.897505 AGTGCAGATTTTTAGCCAAAGGT 59.102 39.130 0.00 0.00 0.00 3.50
3452 5168 4.551388 GTGGTTCAGACTTCAGAGTACAG 58.449 47.826 0.00 0.00 35.88 2.74
3458 5174 4.022762 TCAGACTTCAGAGTACAGCAGAAC 60.023 45.833 0.00 0.00 35.88 3.01
3462 5178 2.598565 TCAGAGTACAGCAGAACCACT 58.401 47.619 0.00 0.00 0.00 4.00
3465 5181 1.269998 GAGTACAGCAGAACCACTCGT 59.730 52.381 0.00 0.00 0.00 4.18
3477 5193 2.413837 ACCACTCGTGTTCTGCAATAC 58.586 47.619 0.00 0.00 0.00 1.89
3478 5194 1.390123 CCACTCGTGTTCTGCAATACG 59.610 52.381 1.66 1.66 45.65 3.06
3483 5199 1.529438 CGTGTTCTGCAATACGTTGGT 59.471 47.619 0.00 0.00 40.99 3.67
3496 5212 2.680577 ACGTTGGTATCGTTCAGTTCC 58.319 47.619 0.00 0.00 38.38 3.62
3498 5214 1.392510 GTTGGTATCGTTCAGTTCCGC 59.607 52.381 0.00 0.00 0.00 5.54
3505 5221 1.342082 CGTTCAGTTCCGCGGTGTAG 61.342 60.000 27.15 14.21 0.00 2.74
3508 5224 1.374252 CAGTTCCGCGGTGTAGCTT 60.374 57.895 27.15 2.04 34.40 3.74
3521 5237 3.565063 GGTGTAGCTTAACGGGTTTTTGA 59.435 43.478 0.00 0.00 0.00 2.69
3526 5242 5.523438 AGCTTAACGGGTTTTTGATGAAA 57.477 34.783 0.00 0.00 0.00 2.69
3531 5247 7.010645 GCTTAACGGGTTTTTGATGAAAAAGAA 59.989 33.333 2.85 0.00 40.83 2.52
3570 5290 5.991606 GCATACAGATGTTATAGAAGTGGCA 59.008 40.000 0.00 0.00 35.30 4.92
3581 5301 7.665559 TGTTATAGAAGTGGCAGAAAGTTTCAT 59.334 33.333 17.65 0.50 0.00 2.57
3582 5302 8.515414 GTTATAGAAGTGGCAGAAAGTTTCATT 58.485 33.333 17.65 2.84 0.00 2.57
3583 5303 5.192327 AGAAGTGGCAGAAAGTTTCATTG 57.808 39.130 17.65 9.12 0.00 2.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
190 195 0.672401 CACCGTAACATGACCGGCTT 60.672 55.000 17.86 0.00 45.49 4.35
197 202 4.381411 TGTTGTCATTCACCGTAACATGA 58.619 39.130 0.00 0.00 0.00 3.07
202 207 4.000325 CTCCATGTTGTCATTCACCGTAA 59.000 43.478 0.00 0.00 31.15 3.18
212 217 1.441738 CGTGCATCTCCATGTTGTCA 58.558 50.000 0.00 0.00 31.86 3.58
216 221 0.036105 TCTGCGTGCATCTCCATGTT 60.036 50.000 0.00 0.00 31.86 2.71
254 259 2.434185 GTGTCTTCATCCGCCGCA 60.434 61.111 0.00 0.00 0.00 5.69
271 276 1.429463 GTCCTTTGCGTACACCTCTG 58.571 55.000 0.00 0.00 0.00 3.35
272 277 0.038526 CGTCCTTTGCGTACACCTCT 60.039 55.000 0.00 0.00 0.00 3.69
279 284 0.241749 ATGTCGTCGTCCTTTGCGTA 59.758 50.000 0.00 0.00 0.00 4.42
287 292 0.914551 CGATGTTCATGTCGTCGTCC 59.085 55.000 19.10 0.00 38.83 4.79
312 377 0.981183 TTTGTCGGGCCTCACTATGT 59.019 50.000 0.84 0.00 0.00 2.29
317 1860 1.671379 GGTCTTTGTCGGGCCTCAC 60.671 63.158 0.84 0.00 0.00 3.51
325 1868 3.736252 CACACTTACTCAGGTCTTTGTCG 59.264 47.826 0.00 0.00 0.00 4.35
330 1873 4.451900 CAAACCACACTTACTCAGGTCTT 58.548 43.478 0.00 0.00 0.00 3.01
346 1889 6.707608 GTCTATGATCATCATGTAGCAAACCA 59.292 38.462 12.53 0.00 37.70 3.67
465 2011 5.859495 ACCAACCTCTCTTTCTCTTGTTAG 58.141 41.667 0.00 0.00 0.00 2.34
481 2027 2.500229 CCGTCAACATTGTACCAACCT 58.500 47.619 0.00 0.00 0.00 3.50
503 2049 5.353123 TCATCATCGTGTATATACAGCGCTA 59.647 40.000 15.93 0.00 36.78 4.26
520 2066 8.012241 GCGACCTTTTCTAAACATATCATCATC 58.988 37.037 0.00 0.00 0.00 2.92
524 2070 6.238103 CGTGCGACCTTTTCTAAACATATCAT 60.238 38.462 0.00 0.00 0.00 2.45
525 2071 5.062934 CGTGCGACCTTTTCTAAACATATCA 59.937 40.000 0.00 0.00 0.00 2.15
526 2072 5.490213 CGTGCGACCTTTTCTAAACATATC 58.510 41.667 0.00 0.00 0.00 1.63
527 2073 4.331717 CCGTGCGACCTTTTCTAAACATAT 59.668 41.667 0.00 0.00 0.00 1.78
528 2074 3.680937 CCGTGCGACCTTTTCTAAACATA 59.319 43.478 0.00 0.00 0.00 2.29
529 2075 2.482721 CCGTGCGACCTTTTCTAAACAT 59.517 45.455 0.00 0.00 0.00 2.71
530 2076 1.868498 CCGTGCGACCTTTTCTAAACA 59.132 47.619 0.00 0.00 0.00 2.83
531 2077 1.196127 CCCGTGCGACCTTTTCTAAAC 59.804 52.381 0.00 0.00 0.00 2.01
532 2078 1.202675 ACCCGTGCGACCTTTTCTAAA 60.203 47.619 0.00 0.00 0.00 1.85
533 2079 0.393820 ACCCGTGCGACCTTTTCTAA 59.606 50.000 0.00 0.00 0.00 2.10
534 2080 0.320073 CACCCGTGCGACCTTTTCTA 60.320 55.000 0.00 0.00 0.00 2.10
535 2081 1.597027 CACCCGTGCGACCTTTTCT 60.597 57.895 0.00 0.00 0.00 2.52
536 2082 1.838568 GACACCCGTGCGACCTTTTC 61.839 60.000 0.00 0.00 0.00 2.29
537 2083 1.890510 GACACCCGTGCGACCTTTT 60.891 57.895 0.00 0.00 0.00 2.27
538 2084 2.280592 GACACCCGTGCGACCTTT 60.281 61.111 0.00 0.00 0.00 3.11
539 2085 3.542676 TGACACCCGTGCGACCTT 61.543 61.111 0.00 0.00 0.00 3.50
540 2086 4.295119 GTGACACCCGTGCGACCT 62.295 66.667 0.00 0.00 0.00 3.85
542 2088 4.936823 ACGTGACACCCGTGCGAC 62.937 66.667 0.00 0.00 37.12 5.19
547 2093 1.959226 GCATTCACGTGACACCCGT 60.959 57.895 19.90 0.00 39.52 5.28
548 2094 2.677003 GGCATTCACGTGACACCCG 61.677 63.158 19.90 6.14 0.00 5.28
549 2095 0.036765 TAGGCATTCACGTGACACCC 60.037 55.000 19.90 17.46 0.00 4.61
550 2096 1.803334 TTAGGCATTCACGTGACACC 58.197 50.000 19.90 19.06 0.00 4.16
551 2097 2.546368 TGTTTAGGCATTCACGTGACAC 59.454 45.455 19.90 10.40 0.00 3.67
552 2098 2.839975 TGTTTAGGCATTCACGTGACA 58.160 42.857 19.90 10.27 0.00 3.58
553 2099 3.889196 TTGTTTAGGCATTCACGTGAC 57.111 42.857 19.90 6.95 0.00 3.67
554 2100 3.818210 ACATTGTTTAGGCATTCACGTGA 59.182 39.130 15.76 15.76 0.00 4.35
555 2101 4.159377 ACATTGTTTAGGCATTCACGTG 57.841 40.909 9.94 9.94 0.00 4.49
556 2102 5.950758 TTACATTGTTTAGGCATTCACGT 57.049 34.783 0.00 0.00 0.00 4.49
557 2103 7.148820 CCTTTTTACATTGTTTAGGCATTCACG 60.149 37.037 0.00 0.00 0.00 4.35
558 2104 7.655732 ACCTTTTTACATTGTTTAGGCATTCAC 59.344 33.333 0.00 0.00 0.00 3.18
559 2105 7.731054 ACCTTTTTACATTGTTTAGGCATTCA 58.269 30.769 0.00 0.00 0.00 2.57
560 2106 8.601845 AACCTTTTTACATTGTTTAGGCATTC 57.398 30.769 0.00 0.00 0.00 2.67
561 2107 8.835439 CAAACCTTTTTACATTGTTTAGGCATT 58.165 29.630 0.00 0.00 0.00 3.56
562 2108 7.041440 GCAAACCTTTTTACATTGTTTAGGCAT 60.041 33.333 0.00 0.00 0.00 4.40
563 2109 6.258947 GCAAACCTTTTTACATTGTTTAGGCA 59.741 34.615 0.00 0.00 0.00 4.75
564 2110 6.481976 AGCAAACCTTTTTACATTGTTTAGGC 59.518 34.615 0.00 0.00 0.00 3.93
565 2111 7.494298 ACAGCAAACCTTTTTACATTGTTTAGG 59.506 33.333 0.00 0.11 0.00 2.69
566 2112 8.419076 ACAGCAAACCTTTTTACATTGTTTAG 57.581 30.769 0.00 0.00 0.00 1.85
567 2113 8.779354 AACAGCAAACCTTTTTACATTGTTTA 57.221 26.923 0.00 0.00 0.00 2.01
568 2114 7.412455 CGAACAGCAAACCTTTTTACATTGTTT 60.412 33.333 0.00 0.00 0.00 2.83
569 2115 6.035542 CGAACAGCAAACCTTTTTACATTGTT 59.964 34.615 0.00 0.00 0.00 2.83
570 2116 5.518487 CGAACAGCAAACCTTTTTACATTGT 59.482 36.000 0.00 0.00 0.00 2.71
571 2117 5.746245 TCGAACAGCAAACCTTTTTACATTG 59.254 36.000 0.00 0.00 0.00 2.82
572 2118 5.746721 GTCGAACAGCAAACCTTTTTACATT 59.253 36.000 0.00 0.00 0.00 2.71
573 2119 5.067283 AGTCGAACAGCAAACCTTTTTACAT 59.933 36.000 0.00 0.00 0.00 2.29
574 2120 4.396790 AGTCGAACAGCAAACCTTTTTACA 59.603 37.500 0.00 0.00 0.00 2.41
575 2121 4.916870 AGTCGAACAGCAAACCTTTTTAC 58.083 39.130 0.00 0.00 0.00 2.01
576 2122 4.879545 AGAGTCGAACAGCAAACCTTTTTA 59.120 37.500 0.00 0.00 0.00 1.52
577 2123 3.694566 AGAGTCGAACAGCAAACCTTTTT 59.305 39.130 0.00 0.00 0.00 1.94
578 2124 3.279434 AGAGTCGAACAGCAAACCTTTT 58.721 40.909 0.00 0.00 0.00 2.27
579 2125 2.872858 GAGAGTCGAACAGCAAACCTTT 59.127 45.455 0.00 0.00 0.00 3.11
580 2126 2.484889 GAGAGTCGAACAGCAAACCTT 58.515 47.619 0.00 0.00 0.00 3.50
581 2127 1.270358 GGAGAGTCGAACAGCAAACCT 60.270 52.381 0.00 0.00 0.00 3.50
582 2128 1.149148 GGAGAGTCGAACAGCAAACC 58.851 55.000 0.00 0.00 0.00 3.27
583 2129 1.865865 TGGAGAGTCGAACAGCAAAC 58.134 50.000 0.00 0.00 0.00 2.93
584 2130 2.416747 CATGGAGAGTCGAACAGCAAA 58.583 47.619 0.00 0.00 0.00 3.68
585 2131 1.338105 CCATGGAGAGTCGAACAGCAA 60.338 52.381 5.56 0.00 0.00 3.91
586 2132 0.247460 CCATGGAGAGTCGAACAGCA 59.753 55.000 5.56 0.00 0.00 4.41
587 2133 0.460987 CCCATGGAGAGTCGAACAGC 60.461 60.000 15.22 0.00 0.00 4.40
588 2134 0.898320 ACCCATGGAGAGTCGAACAG 59.102 55.000 15.22 0.00 0.00 3.16
589 2135 1.822990 GTACCCATGGAGAGTCGAACA 59.177 52.381 15.22 0.00 0.00 3.18
590 2136 1.822990 TGTACCCATGGAGAGTCGAAC 59.177 52.381 15.22 0.00 0.00 3.95
591 2137 2.225382 TGTACCCATGGAGAGTCGAA 57.775 50.000 15.22 0.00 0.00 3.71
592 2138 2.454336 ATGTACCCATGGAGAGTCGA 57.546 50.000 15.22 0.00 0.00 4.20
593 2139 4.873746 AATATGTACCCATGGAGAGTCG 57.126 45.455 15.22 0.00 32.29 4.18
594 2140 9.574516 AATAAAAATATGTACCCATGGAGAGTC 57.425 33.333 15.22 0.00 32.29 3.36
595 2141 9.936329 AAATAAAAATATGTACCCATGGAGAGT 57.064 29.630 15.22 5.21 32.29 3.24
598 2144 9.981114 GGAAAATAAAAATATGTACCCATGGAG 57.019 33.333 15.22 5.95 32.29 3.86
599 2145 9.494055 TGGAAAATAAAAATATGTACCCATGGA 57.506 29.630 15.22 0.00 32.29 3.41
600 2146 9.541143 GTGGAAAATAAAAATATGTACCCATGG 57.459 33.333 4.14 4.14 32.29 3.66
629 2175 3.275143 ACTCATGTGTGTGGACGAAAAA 58.725 40.909 0.00 0.00 0.00 1.94
630 2176 2.869801 GACTCATGTGTGTGGACGAAAA 59.130 45.455 4.90 0.00 0.00 2.29
631 2177 2.479837 GACTCATGTGTGTGGACGAAA 58.520 47.619 4.90 0.00 0.00 3.46
632 2178 1.270094 GGACTCATGTGTGTGGACGAA 60.270 52.381 4.90 0.00 0.00 3.85
633 2179 0.317160 GGACTCATGTGTGTGGACGA 59.683 55.000 4.90 0.00 0.00 4.20
634 2180 0.670546 GGGACTCATGTGTGTGGACG 60.671 60.000 4.90 0.00 0.00 4.79
635 2181 0.321653 GGGGACTCATGTGTGTGGAC 60.322 60.000 4.90 0.00 0.00 4.02
636 2182 1.826340 CGGGGACTCATGTGTGTGGA 61.826 60.000 4.90 0.00 0.00 4.02
637 2183 1.375908 CGGGGACTCATGTGTGTGG 60.376 63.158 4.90 0.00 0.00 4.17
638 2184 2.034879 GCGGGGACTCATGTGTGTG 61.035 63.158 4.90 0.00 0.00 3.82
639 2185 1.841302 ATGCGGGGACTCATGTGTGT 61.841 55.000 4.90 0.00 0.00 3.72
640 2186 0.177836 TATGCGGGGACTCATGTGTG 59.822 55.000 4.90 0.00 0.00 3.82
641 2187 0.465705 CTATGCGGGGACTCATGTGT 59.534 55.000 0.00 0.00 0.00 3.72
642 2188 0.752658 TCTATGCGGGGACTCATGTG 59.247 55.000 0.00 0.00 0.00 3.21
643 2189 1.722034 ATCTATGCGGGGACTCATGT 58.278 50.000 0.00 0.00 0.00 3.21
644 2190 3.092301 TCTATCTATGCGGGGACTCATG 58.908 50.000 0.00 0.00 0.00 3.07
645 2191 3.010696 TCTCTATCTATGCGGGGACTCAT 59.989 47.826 0.00 0.00 0.00 2.90
646 2192 2.375509 TCTCTATCTATGCGGGGACTCA 59.624 50.000 0.00 0.00 0.00 3.41
647 2193 3.013921 CTCTCTATCTATGCGGGGACTC 58.986 54.545 0.00 0.00 0.00 3.36
648 2194 2.645297 TCTCTCTATCTATGCGGGGACT 59.355 50.000 0.00 0.00 0.00 3.85
649 2195 3.013921 CTCTCTCTATCTATGCGGGGAC 58.986 54.545 0.00 0.00 0.00 4.46
650 2196 2.913617 TCTCTCTCTATCTATGCGGGGA 59.086 50.000 0.00 0.00 0.00 4.81
651 2197 3.358111 TCTCTCTCTATCTATGCGGGG 57.642 52.381 0.00 0.00 0.00 5.73
652 2198 5.010112 TGTTTTCTCTCTCTATCTATGCGGG 59.990 44.000 0.00 0.00 0.00 6.13
653 2199 6.078202 TGTTTTCTCTCTCTATCTATGCGG 57.922 41.667 0.00 0.00 0.00 5.69
654 2200 6.143758 GCTTGTTTTCTCTCTCTATCTATGCG 59.856 42.308 0.00 0.00 0.00 4.73
655 2201 7.169645 CAGCTTGTTTTCTCTCTCTATCTATGC 59.830 40.741 0.00 0.00 0.00 3.14
656 2202 7.652909 CCAGCTTGTTTTCTCTCTCTATCTATG 59.347 40.741 0.00 0.00 0.00 2.23
657 2203 7.201992 CCCAGCTTGTTTTCTCTCTCTATCTAT 60.202 40.741 0.00 0.00 0.00 1.98
658 2204 6.097554 CCCAGCTTGTTTTCTCTCTCTATCTA 59.902 42.308 0.00 0.00 0.00 1.98
659 2205 5.104982 CCCAGCTTGTTTTCTCTCTCTATCT 60.105 44.000 0.00 0.00 0.00 1.98
660 2206 5.115480 CCCAGCTTGTTTTCTCTCTCTATC 58.885 45.833 0.00 0.00 0.00 2.08
661 2207 4.080638 CCCCAGCTTGTTTTCTCTCTCTAT 60.081 45.833 0.00 0.00 0.00 1.98
662 2208 3.261897 CCCCAGCTTGTTTTCTCTCTCTA 59.738 47.826 0.00 0.00 0.00 2.43
663 2209 2.039613 CCCCAGCTTGTTTTCTCTCTCT 59.960 50.000 0.00 0.00 0.00 3.10
664 2210 2.039084 TCCCCAGCTTGTTTTCTCTCTC 59.961 50.000 0.00 0.00 0.00 3.20
665 2211 2.039613 CTCCCCAGCTTGTTTTCTCTCT 59.960 50.000 0.00 0.00 0.00 3.10
666 2212 2.431454 CTCCCCAGCTTGTTTTCTCTC 58.569 52.381 0.00 0.00 0.00 3.20
667 2213 1.074566 CCTCCCCAGCTTGTTTTCTCT 59.925 52.381 0.00 0.00 0.00 3.10
668 2214 1.202940 ACCTCCCCAGCTTGTTTTCTC 60.203 52.381 0.00 0.00 0.00 2.87
669 2215 0.853530 ACCTCCCCAGCTTGTTTTCT 59.146 50.000 0.00 0.00 0.00 2.52
670 2216 0.961753 CACCTCCCCAGCTTGTTTTC 59.038 55.000 0.00 0.00 0.00 2.29
671 2217 1.115326 GCACCTCCCCAGCTTGTTTT 61.115 55.000 0.00 0.00 0.00 2.43
672 2218 1.531602 GCACCTCCCCAGCTTGTTT 60.532 57.895 0.00 0.00 0.00 2.83
673 2219 2.116125 GCACCTCCCCAGCTTGTT 59.884 61.111 0.00 0.00 0.00 2.83
674 2220 3.971702 GGCACCTCCCCAGCTTGT 61.972 66.667 0.00 0.00 0.00 3.16
675 2221 3.292481 ATGGCACCTCCCCAGCTTG 62.292 63.158 0.00 0.00 35.48 4.01
676 2222 2.943265 ATGGCACCTCCCCAGCTT 60.943 61.111 0.00 0.00 35.48 3.74
677 2223 3.736224 CATGGCACCTCCCCAGCT 61.736 66.667 0.00 0.00 35.48 4.24
678 2224 4.052518 ACATGGCACCTCCCCAGC 62.053 66.667 0.00 0.00 35.48 4.85
679 2225 2.044650 CACATGGCACCTCCCCAG 60.045 66.667 0.00 0.00 35.48 4.45
680 2226 3.660571 CCACATGGCACCTCCCCA 61.661 66.667 0.00 0.00 36.66 4.96
681 2227 2.228841 AATCCACATGGCACCTCCCC 62.229 60.000 0.00 0.00 34.44 4.81
682 2228 1.039233 CAATCCACATGGCACCTCCC 61.039 60.000 0.00 0.00 34.44 4.30
683 2229 0.323725 ACAATCCACATGGCACCTCC 60.324 55.000 0.00 0.00 34.44 4.30
684 2230 1.549203 AACAATCCACATGGCACCTC 58.451 50.000 0.00 0.00 34.44 3.85
685 2231 1.619827 CAAACAATCCACATGGCACCT 59.380 47.619 0.00 0.00 34.44 4.00
686 2232 1.617850 TCAAACAATCCACATGGCACC 59.382 47.619 0.00 0.00 34.44 5.01
687 2233 2.610232 GGTCAAACAATCCACATGGCAC 60.610 50.000 0.00 0.00 34.44 5.01
688 2234 1.617850 GGTCAAACAATCCACATGGCA 59.382 47.619 0.00 0.00 34.44 4.92
689 2235 1.617850 TGGTCAAACAATCCACATGGC 59.382 47.619 0.00 0.00 34.44 4.40
690 2236 2.892852 ACTGGTCAAACAATCCACATGG 59.107 45.455 0.00 0.00 0.00 3.66
691 2237 3.569277 TGACTGGTCAAACAATCCACATG 59.431 43.478 0.51 0.00 36.53 3.21
692 2238 3.831323 TGACTGGTCAAACAATCCACAT 58.169 40.909 0.51 0.00 36.53 3.21
693 2239 3.289407 TGACTGGTCAAACAATCCACA 57.711 42.857 0.51 0.00 36.53 4.17
703 2249 8.493607 TCATATTCCATCTATTTGACTGGTCAA 58.506 33.333 11.53 11.53 46.72 3.18
704 2250 8.033178 TCATATTCCATCTATTTGACTGGTCA 57.967 34.615 0.00 0.00 37.91 4.02
705 2251 8.908786 TTCATATTCCATCTATTTGACTGGTC 57.091 34.615 0.00 0.00 0.00 4.02
706 2252 9.125026 GTTTCATATTCCATCTATTTGACTGGT 57.875 33.333 0.00 0.00 0.00 4.00
707 2253 9.347240 AGTTTCATATTCCATCTATTTGACTGG 57.653 33.333 0.00 0.00 0.00 4.00
739 2285 9.988815 GAGGTGATTATACAGTCATTGTTAGAT 57.011 33.333 0.00 0.00 41.29 1.98
740 2286 8.977412 TGAGGTGATTATACAGTCATTGTTAGA 58.023 33.333 0.00 0.00 41.29 2.10
741 2287 9.599866 TTGAGGTGATTATACAGTCATTGTTAG 57.400 33.333 0.00 0.00 41.29 2.34
742 2288 9.378551 GTTGAGGTGATTATACAGTCATTGTTA 57.621 33.333 0.00 0.00 41.29 2.41
743 2289 7.882791 TGTTGAGGTGATTATACAGTCATTGTT 59.117 33.333 0.00 0.00 41.29 2.83
744 2290 7.394016 TGTTGAGGTGATTATACAGTCATTGT 58.606 34.615 0.00 0.00 43.96 2.71
745 2291 7.848223 TGTTGAGGTGATTATACAGTCATTG 57.152 36.000 0.00 0.00 0.00 2.82
748 2294 9.764363 GATTATGTTGAGGTGATTATACAGTCA 57.236 33.333 0.00 0.00 0.00 3.41
749 2295 9.764363 TGATTATGTTGAGGTGATTATACAGTC 57.236 33.333 0.00 0.00 0.00 3.51
750 2296 9.547753 GTGATTATGTTGAGGTGATTATACAGT 57.452 33.333 0.00 0.00 0.00 3.55
751 2297 8.993121 GGTGATTATGTTGAGGTGATTATACAG 58.007 37.037 0.00 0.00 0.00 2.74
752 2298 8.713971 AGGTGATTATGTTGAGGTGATTATACA 58.286 33.333 0.00 0.00 0.00 2.29
753 2299 9.209175 GAGGTGATTATGTTGAGGTGATTATAC 57.791 37.037 0.00 0.00 0.00 1.47
754 2300 8.933653 TGAGGTGATTATGTTGAGGTGATTATA 58.066 33.333 0.00 0.00 0.00 0.98
755 2301 7.805163 TGAGGTGATTATGTTGAGGTGATTAT 58.195 34.615 0.00 0.00 0.00 1.28
756 2302 7.194112 TGAGGTGATTATGTTGAGGTGATTA 57.806 36.000 0.00 0.00 0.00 1.75
757 2303 6.065976 TGAGGTGATTATGTTGAGGTGATT 57.934 37.500 0.00 0.00 0.00 2.57
758 2304 5.698741 TGAGGTGATTATGTTGAGGTGAT 57.301 39.130 0.00 0.00 0.00 3.06
759 2305 5.221823 TGTTGAGGTGATTATGTTGAGGTGA 60.222 40.000 0.00 0.00 0.00 4.02
760 2306 5.003160 TGTTGAGGTGATTATGTTGAGGTG 58.997 41.667 0.00 0.00 0.00 4.00
761 2307 5.003804 GTGTTGAGGTGATTATGTTGAGGT 58.996 41.667 0.00 0.00 0.00 3.85
762 2308 4.093408 CGTGTTGAGGTGATTATGTTGAGG 59.907 45.833 0.00 0.00 0.00 3.86
763 2309 4.690748 ACGTGTTGAGGTGATTATGTTGAG 59.309 41.667 0.00 0.00 0.00 3.02
764 2310 4.637276 ACGTGTTGAGGTGATTATGTTGA 58.363 39.130 0.00 0.00 0.00 3.18
765 2311 6.662414 ATACGTGTTGAGGTGATTATGTTG 57.338 37.500 0.00 0.00 0.00 3.33
766 2312 9.692749 CTATATACGTGTTGAGGTGATTATGTT 57.307 33.333 0.00 0.00 0.00 2.71
767 2313 8.857098 ACTATATACGTGTTGAGGTGATTATGT 58.143 33.333 0.00 0.00 0.00 2.29
768 2314 9.129209 CACTATATACGTGTTGAGGTGATTATG 57.871 37.037 0.00 0.00 0.00 1.90
769 2315 9.074576 TCACTATATACGTGTTGAGGTGATTAT 57.925 33.333 0.00 0.00 34.14 1.28
770 2316 8.454570 TCACTATATACGTGTTGAGGTGATTA 57.545 34.615 0.00 0.00 34.14 1.75
771 2317 7.342769 TCACTATATACGTGTTGAGGTGATT 57.657 36.000 0.00 0.00 34.14 2.57
772 2318 6.954487 TCACTATATACGTGTTGAGGTGAT 57.046 37.500 0.00 0.00 34.14 3.06
773 2319 6.293244 CGATCACTATATACGTGTTGAGGTGA 60.293 42.308 0.00 6.44 36.01 4.02
774 2320 5.851703 CGATCACTATATACGTGTTGAGGTG 59.148 44.000 0.00 0.71 34.14 4.00
775 2321 5.530171 ACGATCACTATATACGTGTTGAGGT 59.470 40.000 0.00 0.00 35.91 3.85
776 2322 5.998553 ACGATCACTATATACGTGTTGAGG 58.001 41.667 0.00 0.00 35.91 3.86
791 2337 9.737427 CTTCAGAATACAGTTATTACGATCACT 57.263 33.333 0.00 0.00 0.00 3.41
792 2338 9.517609 ACTTCAGAATACAGTTATTACGATCAC 57.482 33.333 0.00 0.00 0.00 3.06
796 2342 9.999009 CTGTACTTCAGAATACAGTTATTACGA 57.001 33.333 16.80 0.00 46.27 3.43
806 2352 6.413783 TTGGTCACTGTACTTCAGAATACA 57.586 37.500 1.79 5.73 46.27 2.29
807 2353 7.724305 TTTTGGTCACTGTACTTCAGAATAC 57.276 36.000 1.79 0.00 46.27 1.89
809 2355 8.918202 TTATTTTGGTCACTGTACTTCAGAAT 57.082 30.769 1.79 0.00 46.27 2.40
810 2356 7.041372 GCTTATTTTGGTCACTGTACTTCAGAA 60.041 37.037 1.79 0.00 46.27 3.02
811 2357 6.426937 GCTTATTTTGGTCACTGTACTTCAGA 59.573 38.462 1.79 0.00 46.27 3.27
813 2359 5.178623 CGCTTATTTTGGTCACTGTACTTCA 59.821 40.000 0.00 0.00 0.00 3.02
814 2360 5.178809 ACGCTTATTTTGGTCACTGTACTTC 59.821 40.000 0.00 0.00 0.00 3.01
815 2361 5.061179 ACGCTTATTTTGGTCACTGTACTT 58.939 37.500 0.00 0.00 0.00 2.24
816 2362 4.638304 ACGCTTATTTTGGTCACTGTACT 58.362 39.130 0.00 0.00 0.00 2.73
817 2363 5.443693 CGTACGCTTATTTTGGTCACTGTAC 60.444 44.000 0.52 0.00 0.00 2.90
818 2364 4.622313 CGTACGCTTATTTTGGTCACTGTA 59.378 41.667 0.52 0.00 0.00 2.74
819 2365 3.430895 CGTACGCTTATTTTGGTCACTGT 59.569 43.478 0.52 0.00 0.00 3.55
820 2366 3.723835 GCGTACGCTTATTTTGGTCACTG 60.724 47.826 31.95 0.00 38.26 3.66
821 2367 2.414138 GCGTACGCTTATTTTGGTCACT 59.586 45.455 31.95 0.00 38.26 3.41
822 2368 2.765918 GCGTACGCTTATTTTGGTCAC 58.234 47.619 31.95 0.00 38.26 3.67
835 2381 2.664568 TCATTGAACTTGTAGCGTACGC 59.335 45.455 32.17 32.17 42.33 4.42
836 2382 4.561213 TGATCATTGAACTTGTAGCGTACG 59.439 41.667 11.84 11.84 0.00 3.67
837 2383 6.255670 TGATGATCATTGAACTTGTAGCGTAC 59.744 38.462 10.14 0.00 0.00 3.67
838 2384 6.337356 TGATGATCATTGAACTTGTAGCGTA 58.663 36.000 10.14 0.00 0.00 4.42
839 2385 5.178061 TGATGATCATTGAACTTGTAGCGT 58.822 37.500 10.14 0.00 0.00 5.07
840 2386 5.292834 ACTGATGATCATTGAACTTGTAGCG 59.707 40.000 10.14 0.00 0.00 4.26
841 2387 6.484540 CACTGATGATCATTGAACTTGTAGC 58.515 40.000 10.14 0.00 29.66 3.58
842 2388 6.093082 TGCACTGATGATCATTGAACTTGTAG 59.907 38.462 15.81 1.10 29.66 2.74
843 2389 5.939296 TGCACTGATGATCATTGAACTTGTA 59.061 36.000 15.81 0.00 29.66 2.41
844 2390 4.763279 TGCACTGATGATCATTGAACTTGT 59.237 37.500 15.81 0.00 29.66 3.16
845 2391 5.305139 TGCACTGATGATCATTGAACTTG 57.695 39.130 15.81 3.42 29.66 3.16
846 2392 6.525578 AATGCACTGATGATCATTGAACTT 57.474 33.333 15.81 3.75 29.66 2.66
847 2393 6.525578 AAATGCACTGATGATCATTGAACT 57.474 33.333 15.81 0.00 29.66 3.01
848 2394 7.972277 AGTAAAATGCACTGATGATCATTGAAC 59.028 33.333 15.81 0.00 29.66 3.18
849 2395 8.058667 AGTAAAATGCACTGATGATCATTGAA 57.941 30.769 15.81 6.45 29.66 2.69
850 2396 7.555195 AGAGTAAAATGCACTGATGATCATTGA 59.445 33.333 15.81 0.00 29.66 2.57
851 2397 7.704271 AGAGTAAAATGCACTGATGATCATTG 58.296 34.615 10.14 8.26 31.18 2.82
852 2398 7.876936 AGAGTAAAATGCACTGATGATCATT 57.123 32.000 10.14 0.00 0.00 2.57
853 2399 7.774157 AGAAGAGTAAAATGCACTGATGATCAT 59.226 33.333 8.25 8.25 0.00 2.45
854 2400 7.108194 AGAAGAGTAAAATGCACTGATGATCA 58.892 34.615 0.00 0.00 0.00 2.92
855 2401 7.551035 AGAAGAGTAAAATGCACTGATGATC 57.449 36.000 0.00 0.00 0.00 2.92
856 2402 7.934855 AAGAAGAGTAAAATGCACTGATGAT 57.065 32.000 0.00 0.00 0.00 2.45
857 2403 7.750229 AAAGAAGAGTAAAATGCACTGATGA 57.250 32.000 0.00 0.00 0.00 2.92
858 2404 7.269937 CGAAAAGAAGAGTAAAATGCACTGATG 59.730 37.037 0.00 0.00 0.00 3.07
859 2405 7.173218 TCGAAAAGAAGAGTAAAATGCACTGAT 59.827 33.333 0.00 0.00 0.00 2.90
860 2406 6.481976 TCGAAAAGAAGAGTAAAATGCACTGA 59.518 34.615 0.00 0.00 0.00 3.41
861 2407 6.658831 TCGAAAAGAAGAGTAAAATGCACTG 58.341 36.000 0.00 0.00 0.00 3.66
862 2408 6.483640 ACTCGAAAAGAAGAGTAAAATGCACT 59.516 34.615 0.00 0.00 44.93 4.40
863 2409 6.659776 ACTCGAAAAGAAGAGTAAAATGCAC 58.340 36.000 0.00 0.00 44.93 4.57
864 2410 6.861065 ACTCGAAAAGAAGAGTAAAATGCA 57.139 33.333 0.00 0.00 44.93 3.96
871 2417 5.300034 TGGTGTGTACTCGAAAAGAAGAGTA 59.700 40.000 1.66 1.66 44.93 2.59
873 2419 4.617959 TGGTGTGTACTCGAAAAGAAGAG 58.382 43.478 0.00 0.00 40.16 2.85
874 2420 4.659111 TGGTGTGTACTCGAAAAGAAGA 57.341 40.909 0.00 0.00 0.00 2.87
875 2421 5.924475 AATGGTGTGTACTCGAAAAGAAG 57.076 39.130 0.00 0.00 0.00 2.85
912 2458 1.805945 CGGCTAGTGTTCGTCTGCC 60.806 63.158 0.00 0.00 37.24 4.85
999 2550 1.747355 GGTGGAAGATGTTCAGGCATG 59.253 52.381 4.83 0.00 33.93 4.06
1000 2551 1.637553 AGGTGGAAGATGTTCAGGCAT 59.362 47.619 4.83 0.00 33.93 4.40
1001 2552 1.003580 GAGGTGGAAGATGTTCAGGCA 59.996 52.381 4.83 0.00 33.93 4.75
1002 2553 1.680249 GGAGGTGGAAGATGTTCAGGC 60.680 57.143 4.83 0.00 33.93 4.85
1003 2554 1.406069 CGGAGGTGGAAGATGTTCAGG 60.406 57.143 4.83 0.00 33.93 3.86
1004 2555 2.009042 GCGGAGGTGGAAGATGTTCAG 61.009 57.143 4.83 0.00 33.93 3.02
1005 2556 0.036388 GCGGAGGTGGAAGATGTTCA 60.036 55.000 4.83 0.00 33.93 3.18
1032 2583 2.998480 TCGGTCGCCTTGGCCTTA 60.998 61.111 3.32 0.00 0.00 2.69
1315 2866 4.443266 GGAAGAGAGCAGCGCGGT 62.443 66.667 4.23 4.23 0.00 5.68
1480 3031 1.591594 CGCGCATACGGTGGAAGAT 60.592 57.895 8.75 0.00 40.57 2.40
1543 3094 1.684248 GGTAGGAGCAGTCGGGAGTAA 60.684 57.143 0.00 0.00 0.00 2.24
1552 3103 2.341101 CGACGGTGGTAGGAGCAGT 61.341 63.158 0.00 0.00 0.00 4.40
1554 3105 2.282674 ACGACGGTGGTAGGAGCA 60.283 61.111 0.00 0.00 0.00 4.26
1675 3226 1.879380 CATCTCGTCAAAAACCTGCCA 59.121 47.619 0.00 0.00 0.00 4.92
1741 3292 1.302511 GACCATTCTGTGCGTGGGT 60.303 57.895 0.00 0.00 37.33 4.51
2145 3705 1.300931 GCTGCACACCGACAAGAGA 60.301 57.895 0.00 0.00 0.00 3.10
2310 4003 2.596631 GCTGGCATGGGCATCGAT 60.597 61.111 0.00 0.00 43.71 3.59
2651 4345 3.265221 TGCCATTCATCTTCTCCTTGACT 59.735 43.478 0.00 0.00 0.00 3.41
2752 4458 4.401202 TGTTCAGCATAGAGAATGGTACGA 59.599 41.667 0.00 0.00 44.47 3.43
2806 4519 2.281761 CCACACACACCCTCAGGC 60.282 66.667 0.00 0.00 36.11 4.85
2839 4552 4.259356 CAATTGCAGAGACCATCTTCAGA 58.741 43.478 0.00 0.00 35.47 3.27
2866 4579 1.420430 ACCTGAAGAGAAACACCCGA 58.580 50.000 0.00 0.00 0.00 5.14
2885 4598 1.802880 GCGAGGAAAGCAGCTCGAATA 60.803 52.381 0.00 0.00 41.24 1.75
2901 4614 1.743252 GCTCCACCCTCAAAGCGAG 60.743 63.158 0.00 0.00 41.89 5.03
2908 4621 2.993008 GAGCATGCTCCACCCTCA 59.007 61.111 33.31 0.00 37.11 3.86
2930 4643 8.285394 CGATCCAATTATTCACCAGTATTCTTG 58.715 37.037 0.00 0.00 0.00 3.02
2935 4648 7.067496 ACTCGATCCAATTATTCACCAGTAT 57.933 36.000 0.00 0.00 0.00 2.12
2955 4668 0.389817 TCCTTCACAATGCGGACTCG 60.390 55.000 0.00 0.00 39.81 4.18
2956 4669 1.734465 CTTCCTTCACAATGCGGACTC 59.266 52.381 0.00 0.00 0.00 3.36
2957 4670 1.611673 CCTTCCTTCACAATGCGGACT 60.612 52.381 0.00 0.00 0.00 3.85
2962 4675 3.736126 GCTAATGCCTTCCTTCACAATGC 60.736 47.826 0.00 0.00 0.00 3.56
2965 4678 3.244875 TGAGCTAATGCCTTCCTTCACAA 60.245 43.478 0.00 0.00 40.80 3.33
3003 4716 6.516693 GCTGTAACTAATGCCTTTTGGTTTCT 60.517 38.462 0.00 0.00 42.99 2.52
3006 4719 4.832823 AGCTGTAACTAATGCCTTTTGGTT 59.167 37.500 0.00 0.00 42.99 3.67
3015 4728 6.641723 GCTACCTTACTAGCTGTAACTAATGC 59.358 42.308 0.00 0.05 36.33 3.56
3028 4741 5.086104 TGGAGCAAAAGCTACCTTACTAG 57.914 43.478 0.00 0.00 0.00 2.57
3030 4743 4.367039 TTGGAGCAAAAGCTACCTTACT 57.633 40.909 0.00 0.00 0.00 2.24
3036 4749 5.105997 ACAGATGATTTGGAGCAAAAGCTAC 60.106 40.000 0.00 0.00 36.90 3.58
3055 4768 4.883083 AGTGTGTTTCATGTCGTACAGAT 58.117 39.130 0.00 0.00 0.00 2.90
3075 4788 5.810074 GTGTTGTAATTTTCAGCAACCAAGT 59.190 36.000 0.00 0.00 40.08 3.16
3105 4818 8.871629 AGCAGCTAAGTAGTACTACATGATAT 57.128 34.615 29.87 9.69 38.48 1.63
3106 4819 9.438228 CTAGCAGCTAAGTAGTACTACATGATA 57.562 37.037 29.87 20.56 38.48 2.15
3108 4821 7.281098 ACTAGCAGCTAAGTAGTACTACATGA 58.719 38.462 29.87 15.86 38.48 3.07
3109 4822 7.499321 ACTAGCAGCTAAGTAGTACTACATG 57.501 40.000 29.87 20.43 38.48 3.21
3110 4823 9.221933 CATACTAGCAGCTAAGTAGTACTACAT 57.778 37.037 29.87 22.53 38.48 2.29
3111 4824 7.660617 CCATACTAGCAGCTAAGTAGTACTACA 59.339 40.741 29.87 13.16 38.48 2.74
3115 4828 6.002704 TCCCATACTAGCAGCTAAGTAGTAC 58.997 44.000 3.09 0.00 33.22 2.73
3117 4830 5.063017 TCCCATACTAGCAGCTAAGTAGT 57.937 43.478 3.09 2.05 0.00 2.73
3119 4832 3.827302 GCTCCCATACTAGCAGCTAAGTA 59.173 47.826 3.09 8.57 38.63 2.24
3120 4833 2.630580 GCTCCCATACTAGCAGCTAAGT 59.369 50.000 3.09 6.67 38.63 2.24
3121 4834 2.630098 TGCTCCCATACTAGCAGCTAAG 59.370 50.000 3.09 0.74 43.56 2.18
3122 4835 2.677914 TGCTCCCATACTAGCAGCTAA 58.322 47.619 3.09 0.00 43.56 3.09
3123 4836 2.381752 TGCTCCCATACTAGCAGCTA 57.618 50.000 1.13 1.13 43.56 3.32
3124 4837 3.230608 TGCTCCCATACTAGCAGCT 57.769 52.632 0.00 0.00 43.56 4.24
3128 4841 3.368948 GCCTCTAATGCTCCCATACTAGC 60.369 52.174 0.00 0.00 39.25 3.42
3129 4842 4.081752 CAGCCTCTAATGCTCCCATACTAG 60.082 50.000 0.00 0.00 36.81 2.57
3130 4843 3.834813 CAGCCTCTAATGCTCCCATACTA 59.165 47.826 0.00 0.00 36.81 1.82
3131 4844 2.636893 CAGCCTCTAATGCTCCCATACT 59.363 50.000 0.00 0.00 36.81 2.12
3139 4852 3.659183 ATTTGTCCAGCCTCTAATGCT 57.341 42.857 0.00 0.00 40.41 3.79
3140 4853 4.640201 TGTTATTTGTCCAGCCTCTAATGC 59.360 41.667 0.00 0.00 0.00 3.56
3159 4872 1.342074 ACTGGCTGTCTCTGCTGTTA 58.658 50.000 0.00 0.00 0.00 2.41
3207 4920 5.065218 GCTCAACACATAGTACCCAATCTTG 59.935 44.000 0.00 0.00 0.00 3.02
3213 4926 3.169908 TCTGCTCAACACATAGTACCCA 58.830 45.455 0.00 0.00 0.00 4.51
3216 4930 3.933332 GGGTTCTGCTCAACACATAGTAC 59.067 47.826 1.51 0.00 29.26 2.73
3220 4934 1.621317 TCGGGTTCTGCTCAACACATA 59.379 47.619 2.16 0.00 29.26 2.29
3238 4952 0.526524 GTCGGCAGATCTGAACCTCG 60.527 60.000 27.04 18.45 0.00 4.63
3251 4965 0.251916 CATTAGGACAAGGGTCGGCA 59.748 55.000 0.00 0.00 45.28 5.69
3253 4967 0.541863 AGCATTAGGACAAGGGTCGG 59.458 55.000 0.00 0.00 45.28 4.79
3254 4968 1.656652 CAGCATTAGGACAAGGGTCG 58.343 55.000 0.00 0.00 45.28 4.79
3258 4972 2.843701 CTAGCCAGCATTAGGACAAGG 58.156 52.381 0.00 0.00 0.00 3.61
3276 4990 1.336887 GCAGTTTGGTCAGACTCGCTA 60.337 52.381 0.00 0.00 0.00 4.26
3279 4993 1.528586 CTTGCAGTTTGGTCAGACTCG 59.471 52.381 0.00 0.00 0.00 4.18
3327 5041 2.040145 TGGAACATTCAGCATCCACTCA 59.960 45.455 0.00 0.00 37.05 3.41
3344 5059 2.234168 CCATTGAACCACATGCATGGAA 59.766 45.455 29.41 12.50 43.02 3.53
3345 5060 1.826096 CCATTGAACCACATGCATGGA 59.174 47.619 29.41 7.56 43.02 3.41
3350 5065 3.598019 ATCAACCATTGAACCACATGC 57.402 42.857 0.00 0.00 43.95 4.06
3354 5069 8.303876 ACAATTAGTTATCAACCATTGAACCAC 58.696 33.333 14.12 0.00 43.95 4.16
3366 5081 6.463897 GGGGATCCTCGACAATTAGTTATCAA 60.464 42.308 12.58 0.00 0.00 2.57
3381 5096 0.683973 CTCTGGAATGGGGATCCTCG 59.316 60.000 12.58 0.00 37.85 4.63
3385 5100 1.072159 CGCCTCTGGAATGGGGATC 59.928 63.158 0.00 0.00 38.38 3.36
3390 5105 0.321564 TTGTCACGCCTCTGGAATGG 60.322 55.000 0.00 0.00 0.00 3.16
3391 5106 1.081892 CTTGTCACGCCTCTGGAATG 58.918 55.000 0.00 0.00 0.00 2.67
3395 5110 2.320587 GCACTTGTCACGCCTCTGG 61.321 63.158 0.00 0.00 0.00 3.86
3402 5117 3.908382 GCTAAAAATCTGCACTTGTCACG 59.092 43.478 0.00 0.00 0.00 4.35
3425 5140 3.808728 TCTGAAGTCTGAACCACCTTTG 58.191 45.455 0.00 0.00 0.00 2.77
3426 5141 3.456277 ACTCTGAAGTCTGAACCACCTTT 59.544 43.478 0.00 0.00 0.00 3.11
3428 5143 2.683768 ACTCTGAAGTCTGAACCACCT 58.316 47.619 0.00 0.00 0.00 4.00
3430 5145 4.551388 CTGTACTCTGAAGTCTGAACCAC 58.449 47.826 0.00 0.00 36.92 4.16
3431 5146 3.005897 GCTGTACTCTGAAGTCTGAACCA 59.994 47.826 0.00 0.00 36.92 3.67
3433 5148 4.022762 TCTGCTGTACTCTGAAGTCTGAAC 60.023 45.833 0.00 0.00 36.92 3.18
3434 5149 4.145052 TCTGCTGTACTCTGAAGTCTGAA 58.855 43.478 0.00 0.00 36.92 3.02
3435 5150 3.756117 TCTGCTGTACTCTGAAGTCTGA 58.244 45.455 0.00 0.00 36.92 3.27
3436 5151 4.233789 GTTCTGCTGTACTCTGAAGTCTG 58.766 47.826 0.00 0.00 36.92 3.51
3437 5152 3.257127 GGTTCTGCTGTACTCTGAAGTCT 59.743 47.826 0.00 0.00 36.92 3.24
3438 5153 3.005897 TGGTTCTGCTGTACTCTGAAGTC 59.994 47.826 0.00 0.00 36.92 3.01
3439 5154 2.965831 TGGTTCTGCTGTACTCTGAAGT 59.034 45.455 0.00 0.00 39.66 3.01
3440 5155 3.006323 AGTGGTTCTGCTGTACTCTGAAG 59.994 47.826 0.00 0.00 0.00 3.02
3458 5174 1.390123 CGTATTGCAGAACACGAGTGG 59.610 52.381 8.19 0.00 36.53 4.00
3462 5178 1.795872 CCAACGTATTGCAGAACACGA 59.204 47.619 15.35 0.00 37.80 4.35
3465 5181 3.615056 CGATACCAACGTATTGCAGAACA 59.385 43.478 0.00 0.00 35.23 3.18
3471 5187 3.615496 ACTGAACGATACCAACGTATTGC 59.385 43.478 0.00 0.00 43.16 3.56
3477 5193 1.652124 CGGAACTGAACGATACCAACG 59.348 52.381 0.00 0.00 0.00 4.10
3478 5194 1.392510 GCGGAACTGAACGATACCAAC 59.607 52.381 0.00 0.00 0.00 3.77
3483 5199 0.457166 CACCGCGGAACTGAACGATA 60.457 55.000 35.90 0.00 0.00 2.92
3496 5212 2.162754 CCCGTTAAGCTACACCGCG 61.163 63.158 0.00 0.00 34.40 6.46
3498 5214 1.799544 AAACCCGTTAAGCTACACCG 58.200 50.000 0.00 0.00 0.00 4.94
3505 5221 6.477360 TCTTTTTCATCAAAAACCCGTTAAGC 59.523 34.615 0.00 0.00 36.70 3.09
3508 5224 7.773149 TCTTCTTTTTCATCAAAAACCCGTTA 58.227 30.769 0.00 0.00 36.70 3.18
3521 5237 8.715088 GCAATTGCAGTTTATCTTCTTTTTCAT 58.285 29.630 25.36 0.00 41.59 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.