Multiple sequence alignment - TraesCS2B01G500400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G500400 chr2B 100.000 6106 0 0 1 6106 695845208 695839103 0.000000e+00 11276
1 TraesCS2B01G500400 chr2B 79.933 1794 320 28 2288 4064 696289794 696288024 0.000000e+00 1282
2 TraesCS2B01G500400 chr2D 95.885 4253 129 19 810 5055 578932996 578928783 0.000000e+00 6842
3 TraesCS2B01G500400 chr2D 94.577 1088 45 3 5028 6106 578928780 578927698 0.000000e+00 1670
4 TraesCS2B01G500400 chr2D 79.733 1796 327 26 2288 4067 579187737 579185963 0.000000e+00 1266
5 TraesCS2B01G500400 chr2D 86.250 240 23 6 558 795 578933213 578932982 1.020000e-62 252
6 TraesCS2B01G500400 chr2A 95.400 4109 125 17 831 4936 716460121 716456074 0.000000e+00 6482
7 TraesCS2B01G500400 chr2A 79.742 1782 317 25 2299 4064 716897698 716895945 0.000000e+00 1251
8 TraesCS2B01G500400 chr2A 79.191 1730 338 10 2381 4105 717142280 717140568 0.000000e+00 1181
9 TraesCS2B01G500400 chr2A 95.980 597 23 1 5510 6105 716455873 716455277 0.000000e+00 968
10 TraesCS2B01G500400 chr4D 74.099 1637 367 49 2461 4061 385738754 385737139 6.720000e-174 621
11 TraesCS2B01G500400 chr4A 74.138 1624 364 48 2461 4048 67174341 67172738 6.720000e-174 621
12 TraesCS2B01G500400 chr4B 73.990 1634 374 46 2461 4061 472391991 472390376 3.130000e-172 616


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G500400 chr2B 695839103 695845208 6105 True 11276.000000 11276 100.000000 1 6106 1 chr2B.!!$R1 6105
1 TraesCS2B01G500400 chr2B 696288024 696289794 1770 True 1282.000000 1282 79.933000 2288 4064 1 chr2B.!!$R2 1776
2 TraesCS2B01G500400 chr2D 578927698 578933213 5515 True 2921.333333 6842 92.237333 558 6106 3 chr2D.!!$R2 5548
3 TraesCS2B01G500400 chr2D 579185963 579187737 1774 True 1266.000000 1266 79.733000 2288 4067 1 chr2D.!!$R1 1779
4 TraesCS2B01G500400 chr2A 716455277 716460121 4844 True 3725.000000 6482 95.690000 831 6105 2 chr2A.!!$R3 5274
5 TraesCS2B01G500400 chr2A 716895945 716897698 1753 True 1251.000000 1251 79.742000 2299 4064 1 chr2A.!!$R1 1765
6 TraesCS2B01G500400 chr2A 717140568 717142280 1712 True 1181.000000 1181 79.191000 2381 4105 1 chr2A.!!$R2 1724
7 TraesCS2B01G500400 chr4D 385737139 385738754 1615 True 621.000000 621 74.099000 2461 4061 1 chr4D.!!$R1 1600
8 TraesCS2B01G500400 chr4A 67172738 67174341 1603 True 621.000000 621 74.138000 2461 4048 1 chr4A.!!$R1 1587
9 TraesCS2B01G500400 chr4B 472390376 472391991 1615 True 616.000000 616 73.990000 2461 4061 1 chr4B.!!$R1 1600

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
366 367 0.030773 TCCACATCATAGCGAGCGAC 59.969 55.000 0.0 0.0 0.00 5.19 F
375 376 0.100682 TAGCGAGCGACCATTGTCTC 59.899 55.000 0.0 0.0 39.47 3.36 F
384 385 0.172803 ACCATTGTCTCGTCGCCTAC 59.827 55.000 0.0 0.0 0.00 3.18 F
1191 1193 0.179000 CGATTTGGGGTCTCTGGAGG 59.821 60.000 0.0 0.0 0.00 4.30 F
1939 1944 1.068541 GTTTTGGTGAATGGAGACGGC 60.069 52.381 0.0 0.0 0.00 5.68 F
2363 2368 1.188863 AGTCCAGCCCATTCAAATGC 58.811 50.000 0.0 0.0 35.08 3.56 F
4079 4106 1.203063 TCCTACACACTGCTCCACTCT 60.203 52.381 0.0 0.0 0.00 3.24 F
4879 4910 0.382515 CAGCTAGTAGGTGGAGTCGC 59.617 60.000 19.6 0.0 39.87 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1249 1251 0.309612 AGAAATCGGCGCAAACGTTT 59.690 45.000 10.83 7.96 42.83 3.60 R
1723 1727 0.329596 ATCCTTCTGTTGCCCCTCAC 59.670 55.000 0.00 0.00 0.00 3.51 R
1945 1950 0.474614 TGACCGGGTCAATTGGTGAA 59.525 50.000 26.95 0.35 39.78 3.18 R
2343 2348 2.025037 AGCATTTGAATGGGCTGGACTA 60.025 45.455 5.91 0.00 36.90 2.59 R
3428 3436 0.878523 TCTTCTTGCAACACCGTCCG 60.879 55.000 0.00 0.00 0.00 4.79 R
4283 4311 2.094130 AGACTGGCTTACGGTAGCTTTC 60.094 50.000 10.30 5.41 39.29 2.62 R
5093 5155 0.035152 CTACCTGCCCATTGCTGTGA 60.035 55.000 0.00 0.00 42.00 3.58 R
5702 5764 2.645802 GAACACTTTGGTGGTGGTGTA 58.354 47.619 0.00 0.00 44.30 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.719325 CGGTGTTACAATCAGCATCG 57.281 50.000 0.00 0.00 33.61 3.84
20 21 2.267426 CGGTGTTACAATCAGCATCGA 58.733 47.619 0.00 0.00 35.53 3.59
21 22 2.282555 CGGTGTTACAATCAGCATCGAG 59.717 50.000 0.00 0.00 35.53 4.04
22 23 3.521560 GGTGTTACAATCAGCATCGAGA 58.478 45.455 0.00 0.00 34.09 4.04
23 24 4.122776 GGTGTTACAATCAGCATCGAGAT 58.877 43.478 0.00 0.00 34.09 2.75
24 25 4.025396 GGTGTTACAATCAGCATCGAGATG 60.025 45.833 8.62 8.62 41.60 2.90
39 40 6.986904 ATCGAGATGATGGATCATTCAATG 57.013 37.500 3.65 0.00 46.84 2.82
40 41 5.243207 TCGAGATGATGGATCATTCAATGG 58.757 41.667 3.65 0.00 46.84 3.16
41 42 5.001874 CGAGATGATGGATCATTCAATGGT 58.998 41.667 3.65 0.00 46.84 3.55
42 43 5.121925 CGAGATGATGGATCATTCAATGGTC 59.878 44.000 1.51 1.51 46.84 4.02
43 44 5.001874 AGATGATGGATCATTCAATGGTCG 58.998 41.667 4.50 0.00 46.84 4.79
44 45 2.880268 TGATGGATCATTCAATGGTCGC 59.120 45.455 4.50 0.00 41.35 5.19
45 46 2.416680 TGGATCATTCAATGGTCGCA 57.583 45.000 4.50 1.61 41.35 5.10
46 47 2.934887 TGGATCATTCAATGGTCGCAT 58.065 42.857 4.50 0.00 41.35 4.73
47 48 2.880268 TGGATCATTCAATGGTCGCATC 59.120 45.455 4.50 0.00 41.35 3.91
48 49 3.144506 GGATCATTCAATGGTCGCATCT 58.855 45.455 4.50 0.00 41.35 2.90
49 50 3.058432 GGATCATTCAATGGTCGCATCTG 60.058 47.826 4.50 0.00 41.35 2.90
50 51 1.672363 TCATTCAATGGTCGCATCTGC 59.328 47.619 0.00 0.00 37.78 4.26
51 52 1.027357 ATTCAATGGTCGCATCTGCC 58.973 50.000 0.00 0.00 37.91 4.85
52 53 0.322366 TTCAATGGTCGCATCTGCCA 60.322 50.000 0.00 0.00 37.91 4.92
53 54 0.322366 TCAATGGTCGCATCTGCCAA 60.322 50.000 0.00 0.00 37.91 4.52
54 55 0.742505 CAATGGTCGCATCTGCCAAT 59.257 50.000 0.00 0.00 37.91 3.16
55 56 1.948834 CAATGGTCGCATCTGCCAATA 59.051 47.619 0.00 0.00 37.91 1.90
56 57 1.597742 ATGGTCGCATCTGCCAATAC 58.402 50.000 0.00 0.00 37.91 1.89
57 58 0.541392 TGGTCGCATCTGCCAATACT 59.459 50.000 0.00 0.00 37.91 2.12
58 59 1.065491 TGGTCGCATCTGCCAATACTT 60.065 47.619 0.00 0.00 37.91 2.24
59 60 1.599542 GGTCGCATCTGCCAATACTTC 59.400 52.381 0.00 0.00 37.91 3.01
60 61 2.279741 GTCGCATCTGCCAATACTTCA 58.720 47.619 0.00 0.00 37.91 3.02
61 62 2.030946 GTCGCATCTGCCAATACTTCAC 59.969 50.000 0.00 0.00 37.91 3.18
62 63 1.004610 CGCATCTGCCAATACTTCACG 60.005 52.381 0.00 0.00 37.91 4.35
63 64 1.268234 GCATCTGCCAATACTTCACGC 60.268 52.381 0.00 0.00 34.31 5.34
64 65 1.331756 CATCTGCCAATACTTCACGCC 59.668 52.381 0.00 0.00 0.00 5.68
65 66 0.323302 TCTGCCAATACTTCACGCCA 59.677 50.000 0.00 0.00 0.00 5.69
66 67 0.729116 CTGCCAATACTTCACGCCAG 59.271 55.000 0.00 0.00 0.00 4.85
67 68 0.676466 TGCCAATACTTCACGCCAGG 60.676 55.000 0.00 0.00 0.00 4.45
68 69 0.676782 GCCAATACTTCACGCCAGGT 60.677 55.000 0.00 0.00 0.00 4.00
69 70 1.369625 CCAATACTTCACGCCAGGTC 58.630 55.000 0.00 0.00 0.00 3.85
70 71 1.338674 CCAATACTTCACGCCAGGTCA 60.339 52.381 0.00 0.00 0.00 4.02
71 72 2.422597 CAATACTTCACGCCAGGTCAA 58.577 47.619 0.00 0.00 0.00 3.18
72 73 2.811431 CAATACTTCACGCCAGGTCAAA 59.189 45.455 0.00 0.00 0.00 2.69
73 74 2.623878 TACTTCACGCCAGGTCAAAA 57.376 45.000 0.00 0.00 0.00 2.44
74 75 1.981256 ACTTCACGCCAGGTCAAAAT 58.019 45.000 0.00 0.00 0.00 1.82
75 76 1.608590 ACTTCACGCCAGGTCAAAATG 59.391 47.619 0.00 0.00 0.00 2.32
76 77 1.879380 CTTCACGCCAGGTCAAAATGA 59.121 47.619 0.00 0.00 0.00 2.57
77 78 1.234821 TCACGCCAGGTCAAAATGAC 58.765 50.000 1.88 1.88 46.23 3.06
94 95 9.967451 TCAAAATGACACTATAAGGTTAATGGA 57.033 29.630 0.00 0.00 0.00 3.41
96 97 9.747898 AAAATGACACTATAAGGTTAATGGACA 57.252 29.630 0.00 0.00 0.00 4.02
97 98 9.920946 AAATGACACTATAAGGTTAATGGACAT 57.079 29.630 0.00 0.00 0.00 3.06
98 99 9.561069 AATGACACTATAAGGTTAATGGACATC 57.439 33.333 0.00 0.00 0.00 3.06
99 100 8.319057 TGACACTATAAGGTTAATGGACATCT 57.681 34.615 0.00 0.00 0.00 2.90
100 101 8.768397 TGACACTATAAGGTTAATGGACATCTT 58.232 33.333 0.00 0.00 0.00 2.40
101 102 9.262358 GACACTATAAGGTTAATGGACATCTTC 57.738 37.037 0.00 0.00 0.00 2.87
102 103 8.211629 ACACTATAAGGTTAATGGACATCTTCC 58.788 37.037 0.00 0.00 46.13 3.46
103 104 7.661847 CACTATAAGGTTAATGGACATCTTCCC 59.338 40.741 0.00 0.00 45.17 3.97
104 105 4.946160 AAGGTTAATGGACATCTTCCCA 57.054 40.909 0.00 0.00 45.17 4.37
105 106 5.472301 AAGGTTAATGGACATCTTCCCAT 57.528 39.130 0.00 0.00 45.17 4.00
106 107 5.053978 AGGTTAATGGACATCTTCCCATC 57.946 43.478 0.00 0.00 45.17 3.51
107 108 4.728860 AGGTTAATGGACATCTTCCCATCT 59.271 41.667 0.00 0.00 45.17 2.90
108 109 5.194537 AGGTTAATGGACATCTTCCCATCTT 59.805 40.000 0.00 0.00 45.17 2.40
109 110 6.389869 AGGTTAATGGACATCTTCCCATCTTA 59.610 38.462 0.00 0.00 45.17 2.10
110 111 6.712547 GGTTAATGGACATCTTCCCATCTTAG 59.287 42.308 0.00 0.00 45.17 2.18
111 112 7.420214 GGTTAATGGACATCTTCCCATCTTAGA 60.420 40.741 0.00 0.00 45.17 2.10
112 113 5.559148 ATGGACATCTTCCCATCTTAGAC 57.441 43.478 0.00 0.00 45.17 2.59
113 114 3.711704 TGGACATCTTCCCATCTTAGACC 59.288 47.826 0.00 0.00 45.17 3.85
114 115 3.711704 GGACATCTTCCCATCTTAGACCA 59.288 47.826 0.00 0.00 38.70 4.02
115 116 4.349342 GGACATCTTCCCATCTTAGACCAT 59.651 45.833 0.00 0.00 38.70 3.55
116 117 5.512232 GGACATCTTCCCATCTTAGACCATC 60.512 48.000 0.00 0.00 38.70 3.51
117 118 4.349342 ACATCTTCCCATCTTAGACCATCC 59.651 45.833 0.00 0.00 0.00 3.51
118 119 3.318313 TCTTCCCATCTTAGACCATCCC 58.682 50.000 0.00 0.00 0.00 3.85
119 120 2.118403 TCCCATCTTAGACCATCCCC 57.882 55.000 0.00 0.00 0.00 4.81
120 121 1.296832 TCCCATCTTAGACCATCCCCA 59.703 52.381 0.00 0.00 0.00 4.96
121 122 1.421646 CCCATCTTAGACCATCCCCAC 59.578 57.143 0.00 0.00 0.00 4.61
122 123 1.070758 CCATCTTAGACCATCCCCACG 59.929 57.143 0.00 0.00 0.00 4.94
123 124 1.070758 CATCTTAGACCATCCCCACGG 59.929 57.143 0.00 0.00 0.00 4.94
124 125 0.042131 TCTTAGACCATCCCCACGGT 59.958 55.000 0.00 0.00 38.56 4.83
125 126 0.909623 CTTAGACCATCCCCACGGTT 59.090 55.000 0.00 0.00 34.99 4.44
126 127 0.906775 TTAGACCATCCCCACGGTTC 59.093 55.000 0.00 0.00 34.99 3.62
127 128 0.042131 TAGACCATCCCCACGGTTCT 59.958 55.000 0.00 0.00 34.99 3.01
128 129 1.078426 GACCATCCCCACGGTTCTG 60.078 63.158 0.00 0.00 34.99 3.02
129 130 1.537889 ACCATCCCCACGGTTCTGA 60.538 57.895 0.00 0.00 28.43 3.27
130 131 1.221840 CCATCCCCACGGTTCTGAG 59.778 63.158 0.00 0.00 0.00 3.35
131 132 1.221840 CATCCCCACGGTTCTGAGG 59.778 63.158 0.00 0.00 0.00 3.86
132 133 1.995626 ATCCCCACGGTTCTGAGGG 60.996 63.158 7.09 7.09 39.28 4.30
134 135 2.928396 CCCACGGTTCTGAGGGGT 60.928 66.667 6.29 0.00 36.23 4.95
135 136 2.347490 CCACGGTTCTGAGGGGTG 59.653 66.667 0.00 0.00 0.00 4.61
136 137 2.358737 CACGGTTCTGAGGGGTGC 60.359 66.667 0.00 0.00 0.00 5.01
137 138 3.637273 ACGGTTCTGAGGGGTGCC 61.637 66.667 0.00 0.00 0.00 5.01
138 139 3.636231 CGGTTCTGAGGGGTGCCA 61.636 66.667 0.00 0.00 0.00 4.92
139 140 2.971598 CGGTTCTGAGGGGTGCCAT 61.972 63.158 0.00 0.00 0.00 4.40
140 141 1.379044 GGTTCTGAGGGGTGCCATG 60.379 63.158 0.00 0.00 0.00 3.66
141 142 1.380302 GTTCTGAGGGGTGCCATGT 59.620 57.895 0.00 0.00 0.00 3.21
142 143 0.678048 GTTCTGAGGGGTGCCATGTC 60.678 60.000 0.00 0.00 0.00 3.06
143 144 0.842030 TTCTGAGGGGTGCCATGTCT 60.842 55.000 0.00 0.00 0.00 3.41
144 145 1.222936 CTGAGGGGTGCCATGTCTC 59.777 63.158 0.00 0.00 0.00 3.36
145 146 2.187946 GAGGGGTGCCATGTCTCG 59.812 66.667 0.00 0.00 0.00 4.04
146 147 2.607750 AGGGGTGCCATGTCTCGT 60.608 61.111 0.00 0.00 0.00 4.18
147 148 2.125106 GGGGTGCCATGTCTCGTC 60.125 66.667 0.00 0.00 0.00 4.20
148 149 2.662596 GGGTGCCATGTCTCGTCA 59.337 61.111 0.00 0.00 0.00 4.35
149 150 1.221840 GGGTGCCATGTCTCGTCAT 59.778 57.895 0.00 0.00 0.00 3.06
150 151 0.464036 GGGTGCCATGTCTCGTCATA 59.536 55.000 0.00 0.00 0.00 2.15
151 152 1.134521 GGGTGCCATGTCTCGTCATAA 60.135 52.381 0.00 0.00 0.00 1.90
152 153 2.485479 GGGTGCCATGTCTCGTCATAAT 60.485 50.000 0.00 0.00 0.00 1.28
153 154 2.802816 GGTGCCATGTCTCGTCATAATC 59.197 50.000 0.00 0.00 0.00 1.75
154 155 3.493350 GGTGCCATGTCTCGTCATAATCT 60.493 47.826 0.00 0.00 0.00 2.40
155 156 3.492383 GTGCCATGTCTCGTCATAATCTG 59.508 47.826 0.00 0.00 0.00 2.90
156 157 2.478134 GCCATGTCTCGTCATAATCTGC 59.522 50.000 0.00 0.00 0.00 4.26
157 158 3.062763 CCATGTCTCGTCATAATCTGCC 58.937 50.000 0.00 0.00 0.00 4.85
158 159 3.244009 CCATGTCTCGTCATAATCTGCCT 60.244 47.826 0.00 0.00 0.00 4.75
159 160 3.443099 TGTCTCGTCATAATCTGCCTG 57.557 47.619 0.00 0.00 0.00 4.85
160 161 2.760650 TGTCTCGTCATAATCTGCCTGT 59.239 45.455 0.00 0.00 0.00 4.00
161 162 3.119291 GTCTCGTCATAATCTGCCTGTG 58.881 50.000 0.00 0.00 0.00 3.66
162 163 1.863454 CTCGTCATAATCTGCCTGTGC 59.137 52.381 0.00 0.00 38.26 4.57
163 164 0.940126 CGTCATAATCTGCCTGTGCC 59.060 55.000 0.00 0.00 36.33 5.01
164 165 1.743431 CGTCATAATCTGCCTGTGCCA 60.743 52.381 0.00 0.00 36.33 4.92
165 166 1.945394 GTCATAATCTGCCTGTGCCAG 59.055 52.381 0.00 0.00 36.33 4.85
166 167 1.839354 TCATAATCTGCCTGTGCCAGA 59.161 47.619 4.00 0.00 36.33 3.86
167 168 1.945394 CATAATCTGCCTGTGCCAGAC 59.055 52.381 4.00 0.00 36.33 3.51
168 169 0.253044 TAATCTGCCTGTGCCAGACC 59.747 55.000 4.00 0.00 36.33 3.85
169 170 1.782201 AATCTGCCTGTGCCAGACCA 61.782 55.000 4.00 1.17 36.33 4.02
170 171 2.475371 ATCTGCCTGTGCCAGACCAC 62.475 60.000 4.00 0.00 36.33 4.16
171 172 3.480679 CTGCCTGTGCCAGACCACA 62.481 63.158 4.00 0.00 42.99 4.17
172 173 2.980233 GCCTGTGCCAGACCACAC 60.980 66.667 4.00 0.00 40.55 3.82
173 174 2.831770 CCTGTGCCAGACCACACT 59.168 61.111 4.00 0.00 40.55 3.55
174 175 1.598962 CCTGTGCCAGACCACACTG 60.599 63.158 4.00 0.00 40.55 3.66
194 195 4.148230 GTGAGTCACACCGTAGCG 57.852 61.111 18.54 0.00 43.05 4.26
195 196 1.285023 GTGAGTCACACCGTAGCGT 59.715 57.895 18.54 0.00 43.05 5.07
196 197 0.728466 GTGAGTCACACCGTAGCGTC 60.728 60.000 18.54 0.00 43.05 5.19
197 198 0.887836 TGAGTCACACCGTAGCGTCT 60.888 55.000 0.00 0.00 0.00 4.18
198 199 1.081892 GAGTCACACCGTAGCGTCTA 58.918 55.000 0.00 0.00 0.00 2.59
199 200 1.669779 GAGTCACACCGTAGCGTCTAT 59.330 52.381 0.00 0.00 0.00 1.98
200 201 1.669779 AGTCACACCGTAGCGTCTATC 59.330 52.381 0.00 0.00 0.00 2.08
201 202 1.399440 GTCACACCGTAGCGTCTATCA 59.601 52.381 0.00 0.00 0.00 2.15
202 203 2.033049 GTCACACCGTAGCGTCTATCAT 59.967 50.000 0.00 0.00 0.00 2.45
203 204 3.249320 GTCACACCGTAGCGTCTATCATA 59.751 47.826 0.00 0.00 0.00 2.15
204 205 4.070009 TCACACCGTAGCGTCTATCATAT 58.930 43.478 0.00 0.00 0.00 1.78
205 206 4.517832 TCACACCGTAGCGTCTATCATATT 59.482 41.667 0.00 0.00 0.00 1.28
206 207 4.617223 CACACCGTAGCGTCTATCATATTG 59.383 45.833 0.00 0.00 0.00 1.90
207 208 4.277672 ACACCGTAGCGTCTATCATATTGT 59.722 41.667 0.00 0.00 0.00 2.71
208 209 5.220381 CACCGTAGCGTCTATCATATTGTT 58.780 41.667 0.00 0.00 0.00 2.83
209 210 5.117135 CACCGTAGCGTCTATCATATTGTTG 59.883 44.000 0.00 0.00 0.00 3.33
210 211 4.621460 CCGTAGCGTCTATCATATTGTTGG 59.379 45.833 0.00 0.00 0.00 3.77
211 212 5.458015 CGTAGCGTCTATCATATTGTTGGA 58.542 41.667 0.00 0.00 0.00 3.53
212 213 5.569441 CGTAGCGTCTATCATATTGTTGGAG 59.431 44.000 0.00 0.00 0.00 3.86
213 214 4.310769 AGCGTCTATCATATTGTTGGAGC 58.689 43.478 0.00 0.00 0.00 4.70
214 215 3.433615 GCGTCTATCATATTGTTGGAGCC 59.566 47.826 0.00 0.00 0.00 4.70
215 216 3.675225 CGTCTATCATATTGTTGGAGCCG 59.325 47.826 0.00 0.00 0.00 5.52
216 217 4.632153 GTCTATCATATTGTTGGAGCCGT 58.368 43.478 0.00 0.00 0.00 5.68
217 218 5.057149 GTCTATCATATTGTTGGAGCCGTT 58.943 41.667 0.00 0.00 0.00 4.44
218 219 6.220930 GTCTATCATATTGTTGGAGCCGTTA 58.779 40.000 0.00 0.00 0.00 3.18
219 220 6.874134 GTCTATCATATTGTTGGAGCCGTTAT 59.126 38.462 0.00 0.00 0.00 1.89
220 221 7.063544 GTCTATCATATTGTTGGAGCCGTTATC 59.936 40.741 0.00 0.00 0.00 1.75
221 222 4.385825 TCATATTGTTGGAGCCGTTATCC 58.614 43.478 0.00 0.00 37.35 2.59
222 223 1.663695 ATTGTTGGAGCCGTTATCCG 58.336 50.000 0.00 0.00 39.91 4.18
223 224 1.022451 TTGTTGGAGCCGTTATCCGC 61.022 55.000 0.00 0.00 39.91 5.54
224 225 1.153429 GTTGGAGCCGTTATCCGCT 60.153 57.895 0.00 0.00 39.91 5.52
225 226 0.103572 GTTGGAGCCGTTATCCGCTA 59.896 55.000 0.00 0.00 39.91 4.26
226 227 0.103572 TTGGAGCCGTTATCCGCTAC 59.896 55.000 0.00 0.00 39.91 3.58
227 228 0.754217 TGGAGCCGTTATCCGCTACT 60.754 55.000 0.00 0.00 39.91 2.57
228 229 1.242076 GGAGCCGTTATCCGCTACTA 58.758 55.000 0.00 0.00 34.38 1.82
229 230 1.068679 GGAGCCGTTATCCGCTACTAC 60.069 57.143 0.00 0.00 34.38 2.73
230 231 1.605710 GAGCCGTTATCCGCTACTACA 59.394 52.381 0.00 0.00 34.38 2.74
231 232 2.228343 GAGCCGTTATCCGCTACTACAT 59.772 50.000 0.00 0.00 34.38 2.29
232 233 2.030185 AGCCGTTATCCGCTACTACATG 60.030 50.000 0.00 0.00 34.38 3.21
233 234 2.288030 GCCGTTATCCGCTACTACATGT 60.288 50.000 2.69 2.69 34.38 3.21
234 235 3.562505 CCGTTATCCGCTACTACATGTC 58.437 50.000 0.00 0.00 34.38 3.06
235 236 3.223953 CGTTATCCGCTACTACATGTCG 58.776 50.000 0.00 0.00 0.00 4.35
236 237 3.562505 GTTATCCGCTACTACATGTCGG 58.437 50.000 14.92 14.92 37.38 4.79
237 238 0.314302 ATCCGCTACTACATGTCGGC 59.686 55.000 15.97 9.36 36.40 5.54
238 239 1.657487 CCGCTACTACATGTCGGCG 60.657 63.158 20.04 20.04 44.41 6.46
239 240 1.657487 CGCTACTACATGTCGGCGG 60.657 63.158 19.55 0.00 42.65 6.13
240 241 1.436336 GCTACTACATGTCGGCGGT 59.564 57.895 7.21 0.00 0.00 5.68
241 242 0.870307 GCTACTACATGTCGGCGGTG 60.870 60.000 7.21 6.68 0.00 4.94
242 243 0.736636 CTACTACATGTCGGCGGTGA 59.263 55.000 7.21 0.00 0.00 4.02
243 244 1.133598 CTACTACATGTCGGCGGTGAA 59.866 52.381 7.21 0.00 0.00 3.18
244 245 0.108804 ACTACATGTCGGCGGTGAAG 60.109 55.000 7.21 0.07 0.00 3.02
245 246 0.172578 CTACATGTCGGCGGTGAAGA 59.827 55.000 7.21 0.00 0.00 2.87
246 247 0.172578 TACATGTCGGCGGTGAAGAG 59.827 55.000 7.21 0.00 0.00 2.85
247 248 2.125512 ATGTCGGCGGTGAAGAGC 60.126 61.111 7.21 0.00 0.00 4.09
255 256 3.567797 GGTGAAGAGCCGATGCGC 61.568 66.667 0.00 0.00 44.33 6.09
256 257 3.567797 GTGAAGAGCCGATGCGCC 61.568 66.667 4.18 0.00 44.33 6.53
257 258 4.838152 TGAAGAGCCGATGCGCCC 62.838 66.667 4.18 0.00 44.33 6.13
261 262 4.235762 GAGCCGATGCGCCCCTTA 62.236 66.667 4.18 0.00 44.33 2.69
262 263 4.547367 AGCCGATGCGCCCCTTAC 62.547 66.667 4.18 0.00 44.33 2.34
263 264 4.547367 GCCGATGCGCCCCTTACT 62.547 66.667 4.18 0.00 0.00 2.24
264 265 2.280186 CCGATGCGCCCCTTACTC 60.280 66.667 4.18 0.00 0.00 2.59
265 266 2.280186 CGATGCGCCCCTTACTCC 60.280 66.667 4.18 0.00 0.00 3.85
266 267 2.111251 GATGCGCCCCTTACTCCC 59.889 66.667 4.18 0.00 0.00 4.30
267 268 3.477578 GATGCGCCCCTTACTCCCC 62.478 68.421 4.18 0.00 0.00 4.81
269 270 4.484872 GCGCCCCTTACTCCCCAC 62.485 72.222 0.00 0.00 0.00 4.61
270 271 3.793888 CGCCCCTTACTCCCCACC 61.794 72.222 0.00 0.00 0.00 4.61
271 272 3.417779 GCCCCTTACTCCCCACCC 61.418 72.222 0.00 0.00 0.00 4.61
272 273 2.459710 CCCCTTACTCCCCACCCT 59.540 66.667 0.00 0.00 0.00 4.34
273 274 1.693103 CCCCTTACTCCCCACCCTC 60.693 68.421 0.00 0.00 0.00 4.30
274 275 1.082206 CCCTTACTCCCCACCCTCA 59.918 63.158 0.00 0.00 0.00 3.86
275 276 1.272554 CCCTTACTCCCCACCCTCAC 61.273 65.000 0.00 0.00 0.00 3.51
276 277 0.546747 CCTTACTCCCCACCCTCACA 60.547 60.000 0.00 0.00 0.00 3.58
277 278 0.613777 CTTACTCCCCACCCTCACAC 59.386 60.000 0.00 0.00 0.00 3.82
278 279 0.104882 TTACTCCCCACCCTCACACA 60.105 55.000 0.00 0.00 0.00 3.72
279 280 0.834687 TACTCCCCACCCTCACACAC 60.835 60.000 0.00 0.00 0.00 3.82
280 281 1.843376 CTCCCCACCCTCACACACT 60.843 63.158 0.00 0.00 0.00 3.55
281 282 0.544357 CTCCCCACCCTCACACACTA 60.544 60.000 0.00 0.00 0.00 2.74
282 283 0.834687 TCCCCACCCTCACACACTAC 60.835 60.000 0.00 0.00 0.00 2.73
283 284 1.677552 CCCACCCTCACACACTACC 59.322 63.158 0.00 0.00 0.00 3.18
284 285 1.292223 CCACCCTCACACACTACCG 59.708 63.158 0.00 0.00 0.00 4.02
285 286 1.374252 CACCCTCACACACTACCGC 60.374 63.158 0.00 0.00 0.00 5.68
286 287 1.533273 ACCCTCACACACTACCGCT 60.533 57.895 0.00 0.00 0.00 5.52
287 288 1.079819 CCCTCACACACTACCGCTG 60.080 63.158 0.00 0.00 0.00 5.18
288 289 1.079819 CCTCACACACTACCGCTGG 60.080 63.158 0.00 0.00 0.00 4.85
289 290 1.738099 CTCACACACTACCGCTGGC 60.738 63.158 0.00 0.00 0.00 4.85
290 291 3.112075 CACACACTACCGCTGGCG 61.112 66.667 8.08 8.08 39.44 5.69
291 292 3.612681 ACACACTACCGCTGGCGT 61.613 61.111 13.84 5.01 37.81 5.68
292 293 3.112075 CACACTACCGCTGGCGTG 61.112 66.667 13.84 7.83 37.81 5.34
293 294 3.299977 ACACTACCGCTGGCGTGA 61.300 61.111 13.84 0.52 37.81 4.35
294 295 2.507102 CACTACCGCTGGCGTGAG 60.507 66.667 13.84 11.89 37.81 3.51
295 296 2.675423 ACTACCGCTGGCGTGAGA 60.675 61.111 13.84 0.00 37.81 3.27
296 297 2.052690 ACTACCGCTGGCGTGAGAT 61.053 57.895 13.84 0.00 37.81 2.75
297 298 1.589993 CTACCGCTGGCGTGAGATG 60.590 63.158 13.84 0.12 37.81 2.90
298 299 2.960957 CTACCGCTGGCGTGAGATGG 62.961 65.000 13.84 0.00 37.81 3.51
299 300 4.457496 CCGCTGGCGTGAGATGGT 62.457 66.667 13.84 0.00 37.81 3.55
300 301 2.887568 CGCTGGCGTGAGATGGTC 60.888 66.667 6.83 0.00 34.35 4.02
301 302 2.887568 GCTGGCGTGAGATGGTCG 60.888 66.667 0.00 0.00 0.00 4.79
305 306 3.999051 GCGTGAGATGGTCGCTAC 58.001 61.111 0.00 0.00 45.29 3.58
306 307 1.433879 GCGTGAGATGGTCGCTACT 59.566 57.895 0.00 0.00 45.29 2.57
307 308 0.592754 GCGTGAGATGGTCGCTACTC 60.593 60.000 0.00 0.00 45.29 2.59
308 309 1.018148 CGTGAGATGGTCGCTACTCT 58.982 55.000 0.00 0.00 33.04 3.24
309 310 1.003331 CGTGAGATGGTCGCTACTCTC 60.003 57.143 0.00 1.85 35.72 3.20
310 311 1.003331 GTGAGATGGTCGCTACTCTCG 60.003 57.143 0.00 0.00 37.53 4.04
311 312 0.040781 GAGATGGTCGCTACTCTCGC 60.041 60.000 0.00 0.00 0.00 5.03
312 313 0.748367 AGATGGTCGCTACTCTCGCA 60.748 55.000 0.00 0.00 0.00 5.10
313 314 0.592754 GATGGTCGCTACTCTCGCAC 60.593 60.000 0.00 0.00 0.00 5.34
314 315 2.005960 ATGGTCGCTACTCTCGCACC 62.006 60.000 0.00 0.00 0.00 5.01
315 316 2.408241 GGTCGCTACTCTCGCACCT 61.408 63.158 0.00 0.00 0.00 4.00
316 317 1.226435 GTCGCTACTCTCGCACCTG 60.226 63.158 0.00 0.00 0.00 4.00
317 318 2.103143 CGCTACTCTCGCACCTGG 59.897 66.667 0.00 0.00 0.00 4.45
318 319 2.202810 GCTACTCTCGCACCTGGC 60.203 66.667 0.00 0.00 39.90 4.85
319 320 3.006756 GCTACTCTCGCACCTGGCA 62.007 63.158 0.00 0.00 45.17 4.92
320 321 1.591703 CTACTCTCGCACCTGGCAA 59.408 57.895 0.00 0.00 45.17 4.52
321 322 0.037326 CTACTCTCGCACCTGGCAAA 60.037 55.000 0.00 0.00 45.17 3.68
322 323 0.394938 TACTCTCGCACCTGGCAAAA 59.605 50.000 0.00 0.00 45.17 2.44
323 324 0.250901 ACTCTCGCACCTGGCAAAAT 60.251 50.000 0.00 0.00 45.17 1.82
324 325 0.449388 CTCTCGCACCTGGCAAAATC 59.551 55.000 0.00 0.00 45.17 2.17
325 326 0.960364 TCTCGCACCTGGCAAAATCC 60.960 55.000 0.00 0.00 45.17 3.01
326 327 1.937546 CTCGCACCTGGCAAAATCCC 61.938 60.000 0.00 0.00 45.17 3.85
327 328 2.274645 CGCACCTGGCAAAATCCCA 61.275 57.895 0.00 0.00 45.17 4.37
329 330 1.187567 GCACCTGGCAAAATCCCAGT 61.188 55.000 6.68 0.00 46.73 4.00
330 331 1.341080 CACCTGGCAAAATCCCAGTT 58.659 50.000 6.68 0.00 46.73 3.16
331 332 1.001181 CACCTGGCAAAATCCCAGTTG 59.999 52.381 6.68 0.00 46.73 3.16
332 333 1.341080 CCTGGCAAAATCCCAGTTGT 58.659 50.000 6.68 0.00 46.73 3.32
333 334 1.001181 CCTGGCAAAATCCCAGTTGTG 59.999 52.381 6.68 0.00 46.73 3.33
334 335 1.688197 CTGGCAAAATCCCAGTTGTGT 59.312 47.619 0.00 0.00 43.86 3.72
335 336 2.102925 CTGGCAAAATCCCAGTTGTGTT 59.897 45.455 0.00 0.00 43.86 3.32
336 337 2.158986 TGGCAAAATCCCAGTTGTGTTG 60.159 45.455 0.00 0.00 0.00 3.33
337 338 1.866601 GCAAAATCCCAGTTGTGTTGC 59.133 47.619 0.00 0.00 33.85 4.17
338 339 2.482864 CAAAATCCCAGTTGTGTTGCC 58.517 47.619 0.00 0.00 0.00 4.52
339 340 1.786937 AAATCCCAGTTGTGTTGCCA 58.213 45.000 0.00 0.00 0.00 4.92
340 341 1.786937 AATCCCAGTTGTGTTGCCAA 58.213 45.000 0.00 0.00 0.00 4.52
341 342 1.039856 ATCCCAGTTGTGTTGCCAAC 58.960 50.000 0.00 0.00 44.00 3.77
342 343 0.323816 TCCCAGTTGTGTTGCCAACA 60.324 50.000 6.08 6.08 45.66 3.33
343 344 0.534412 CCCAGTTGTGTTGCCAACAA 59.466 50.000 12.63 0.11 45.66 2.83
344 345 1.471327 CCCAGTTGTGTTGCCAACAAG 60.471 52.381 12.63 0.51 45.66 3.16
345 346 1.280066 CAGTTGTGTTGCCAACAAGC 58.720 50.000 12.63 5.58 45.66 4.01
346 347 0.894141 AGTTGTGTTGCCAACAAGCA 59.106 45.000 12.63 4.22 45.66 3.91
347 348 1.481772 AGTTGTGTTGCCAACAAGCAT 59.518 42.857 12.63 0.00 45.66 3.79
348 349 1.860326 GTTGTGTTGCCAACAAGCATC 59.140 47.619 12.63 2.94 44.16 3.91
349 350 0.388659 TGTGTTGCCAACAAGCATCC 59.611 50.000 12.63 0.00 44.16 3.51
350 351 0.388659 GTGTTGCCAACAAGCATCCA 59.611 50.000 12.63 0.00 44.16 3.41
351 352 0.388659 TGTTGCCAACAAGCATCCAC 59.611 50.000 8.02 0.00 43.64 4.02
352 353 0.388659 GTTGCCAACAAGCATCCACA 59.611 50.000 1.91 0.00 43.64 4.17
353 354 1.001181 GTTGCCAACAAGCATCCACAT 59.999 47.619 1.91 0.00 43.64 3.21
354 355 0.889994 TGCCAACAAGCATCCACATC 59.110 50.000 0.00 0.00 38.00 3.06
355 356 0.889994 GCCAACAAGCATCCACATCA 59.110 50.000 0.00 0.00 0.00 3.07
356 357 1.479323 GCCAACAAGCATCCACATCAT 59.521 47.619 0.00 0.00 0.00 2.45
357 358 2.689471 GCCAACAAGCATCCACATCATA 59.311 45.455 0.00 0.00 0.00 2.15
358 359 3.243301 GCCAACAAGCATCCACATCATAG 60.243 47.826 0.00 0.00 0.00 2.23
359 360 3.243301 CCAACAAGCATCCACATCATAGC 60.243 47.826 0.00 0.00 0.00 2.97
360 361 2.216046 ACAAGCATCCACATCATAGCG 58.784 47.619 0.00 0.00 0.00 4.26
361 362 2.158914 ACAAGCATCCACATCATAGCGA 60.159 45.455 0.00 0.00 0.00 4.93
362 363 2.452295 AGCATCCACATCATAGCGAG 57.548 50.000 0.00 0.00 0.00 5.03
363 364 0.795085 GCATCCACATCATAGCGAGC 59.205 55.000 0.00 0.00 0.00 5.03
364 365 1.066136 CATCCACATCATAGCGAGCG 58.934 55.000 0.00 0.00 0.00 5.03
365 366 0.961753 ATCCACATCATAGCGAGCGA 59.038 50.000 0.00 0.00 0.00 4.93
366 367 0.030773 TCCACATCATAGCGAGCGAC 59.969 55.000 0.00 0.00 0.00 5.19
367 368 0.941463 CCACATCATAGCGAGCGACC 60.941 60.000 0.00 0.00 0.00 4.79
368 369 0.249031 CACATCATAGCGAGCGACCA 60.249 55.000 0.00 0.00 0.00 4.02
369 370 0.676184 ACATCATAGCGAGCGACCAT 59.324 50.000 0.00 0.00 0.00 3.55
370 371 1.069204 ACATCATAGCGAGCGACCATT 59.931 47.619 0.00 0.00 0.00 3.16
371 372 1.458445 CATCATAGCGAGCGACCATTG 59.542 52.381 0.00 0.00 0.00 2.82
372 373 0.459899 TCATAGCGAGCGACCATTGT 59.540 50.000 0.00 0.00 0.00 2.71
373 374 0.855349 CATAGCGAGCGACCATTGTC 59.145 55.000 0.00 0.00 38.18 3.18
374 375 0.747255 ATAGCGAGCGACCATTGTCT 59.253 50.000 0.00 0.00 39.47 3.41
375 376 0.100682 TAGCGAGCGACCATTGTCTC 59.899 55.000 0.00 0.00 39.47 3.36
376 377 2.508891 GCGAGCGACCATTGTCTCG 61.509 63.158 6.18 6.18 40.31 4.04
377 378 1.154016 CGAGCGACCATTGTCTCGT 60.154 57.895 0.00 0.00 39.47 4.18
378 379 1.134530 CGAGCGACCATTGTCTCGTC 61.135 60.000 0.00 0.00 39.47 4.20
380 381 3.374330 CGACCATTGTCTCGTCGC 58.626 61.111 0.00 0.00 42.37 5.19
381 382 2.158959 CGACCATTGTCTCGTCGCC 61.159 63.158 0.00 0.00 42.37 5.54
382 383 1.215647 GACCATTGTCTCGTCGCCT 59.784 57.895 0.00 0.00 38.53 5.52
383 384 0.454600 GACCATTGTCTCGTCGCCTA 59.545 55.000 0.00 0.00 38.53 3.93
384 385 0.172803 ACCATTGTCTCGTCGCCTAC 59.827 55.000 0.00 0.00 0.00 3.18
385 386 0.527817 CCATTGTCTCGTCGCCTACC 60.528 60.000 0.00 0.00 0.00 3.18
386 387 0.527817 CATTGTCTCGTCGCCTACCC 60.528 60.000 0.00 0.00 0.00 3.69
387 388 0.968901 ATTGTCTCGTCGCCTACCCA 60.969 55.000 0.00 0.00 0.00 4.51
388 389 0.968901 TTGTCTCGTCGCCTACCCAT 60.969 55.000 0.00 0.00 0.00 4.00
389 390 1.359475 GTCTCGTCGCCTACCCATC 59.641 63.158 0.00 0.00 0.00 3.51
390 391 2.184830 TCTCGTCGCCTACCCATCG 61.185 63.158 0.00 0.00 0.00 3.84
391 392 3.825833 CTCGTCGCCTACCCATCGC 62.826 68.421 0.00 0.00 0.00 4.58
392 393 4.201679 CGTCGCCTACCCATCGCA 62.202 66.667 0.00 0.00 0.00 5.10
393 394 2.279517 GTCGCCTACCCATCGCAG 60.280 66.667 0.00 0.00 0.00 5.18
394 395 2.758327 TCGCCTACCCATCGCAGT 60.758 61.111 0.00 0.00 0.00 4.40
395 396 2.279517 CGCCTACCCATCGCAGTC 60.280 66.667 0.00 0.00 0.00 3.51
396 397 2.279517 GCCTACCCATCGCAGTCG 60.280 66.667 0.00 0.00 0.00 4.18
397 398 2.279517 CCTACCCATCGCAGTCGC 60.280 66.667 0.00 0.00 35.26 5.19
398 399 2.494445 CTACCCATCGCAGTCGCA 59.506 61.111 0.00 0.00 38.40 5.10
399 400 1.878522 CTACCCATCGCAGTCGCAC 60.879 63.158 0.00 0.00 38.40 5.34
400 401 3.365291 TACCCATCGCAGTCGCACC 62.365 63.158 0.00 0.00 38.40 5.01
401 402 4.457496 CCCATCGCAGTCGCACCT 62.457 66.667 0.00 0.00 38.40 4.00
402 403 2.887568 CCATCGCAGTCGCACCTC 60.888 66.667 0.00 0.00 38.40 3.85
403 404 3.250323 CATCGCAGTCGCACCTCG 61.250 66.667 0.00 0.00 38.40 4.63
404 405 4.498520 ATCGCAGTCGCACCTCGG 62.499 66.667 0.00 0.00 38.40 4.63
424 425 4.641645 CCGCCACCCTCACTGCAA 62.642 66.667 0.00 0.00 0.00 4.08
425 426 2.360350 CGCCACCCTCACTGCAAT 60.360 61.111 0.00 0.00 0.00 3.56
426 427 2.693762 CGCCACCCTCACTGCAATG 61.694 63.158 0.00 0.00 0.00 2.82
427 428 1.303561 GCCACCCTCACTGCAATGA 60.304 57.895 0.00 0.00 0.00 2.57
428 429 0.682209 GCCACCCTCACTGCAATGAT 60.682 55.000 0.00 0.00 0.00 2.45
429 430 1.386533 CCACCCTCACTGCAATGATC 58.613 55.000 0.00 0.00 0.00 2.92
430 431 1.340308 CCACCCTCACTGCAATGATCA 60.340 52.381 0.00 0.00 0.00 2.92
431 432 2.439409 CACCCTCACTGCAATGATCAA 58.561 47.619 0.00 0.00 0.00 2.57
432 433 3.021695 CACCCTCACTGCAATGATCAAT 58.978 45.455 0.00 0.00 0.00 2.57
433 434 3.021695 ACCCTCACTGCAATGATCAATG 58.978 45.455 6.39 6.39 0.00 2.82
434 435 2.361119 CCCTCACTGCAATGATCAATGG 59.639 50.000 12.62 0.00 0.00 3.16
435 436 3.021695 CCTCACTGCAATGATCAATGGT 58.978 45.455 12.62 0.20 0.00 3.55
436 437 3.181490 CCTCACTGCAATGATCAATGGTG 60.181 47.826 12.62 12.12 0.00 4.17
437 438 2.756207 TCACTGCAATGATCAATGGTGG 59.244 45.455 12.62 0.00 0.00 4.61
438 439 1.479323 ACTGCAATGATCAATGGTGGC 59.521 47.619 12.62 0.00 0.00 5.01
439 440 1.754803 CTGCAATGATCAATGGTGGCT 59.245 47.619 12.62 0.00 0.00 4.75
440 441 1.478916 TGCAATGATCAATGGTGGCTG 59.521 47.619 12.62 0.00 0.00 4.85
441 442 1.479323 GCAATGATCAATGGTGGCTGT 59.521 47.619 12.62 0.00 0.00 4.40
442 443 2.480759 GCAATGATCAATGGTGGCTGTC 60.481 50.000 12.62 0.00 0.00 3.51
443 444 3.021695 CAATGATCAATGGTGGCTGTCT 58.978 45.455 0.00 0.00 0.00 3.41
444 445 2.885135 TGATCAATGGTGGCTGTCTT 57.115 45.000 0.00 0.00 0.00 3.01
445 446 2.715046 TGATCAATGGTGGCTGTCTTC 58.285 47.619 0.00 0.00 0.00 2.87
446 447 1.667724 GATCAATGGTGGCTGTCTTCG 59.332 52.381 0.00 0.00 0.00 3.79
447 448 0.396435 TCAATGGTGGCTGTCTTCGT 59.604 50.000 0.00 0.00 0.00 3.85
448 449 0.798776 CAATGGTGGCTGTCTTCGTC 59.201 55.000 0.00 0.00 0.00 4.20
449 450 0.396435 AATGGTGGCTGTCTTCGTCA 59.604 50.000 0.00 0.00 0.00 4.35
450 451 0.396435 ATGGTGGCTGTCTTCGTCAA 59.604 50.000 0.00 0.00 0.00 3.18
451 452 0.531974 TGGTGGCTGTCTTCGTCAAC 60.532 55.000 0.00 0.00 0.00 3.18
452 453 1.228657 GGTGGCTGTCTTCGTCAACC 61.229 60.000 0.00 0.00 0.00 3.77
453 454 0.531974 GTGGCTGTCTTCGTCAACCA 60.532 55.000 0.00 0.00 0.00 3.67
454 455 0.531974 TGGCTGTCTTCGTCAACCAC 60.532 55.000 0.00 0.00 0.00 4.16
455 456 0.249911 GGCTGTCTTCGTCAACCACT 60.250 55.000 0.00 0.00 0.00 4.00
456 457 0.861837 GCTGTCTTCGTCAACCACTG 59.138 55.000 0.00 0.00 0.00 3.66
457 458 1.806623 GCTGTCTTCGTCAACCACTGT 60.807 52.381 0.00 0.00 0.00 3.55
458 459 2.550978 CTGTCTTCGTCAACCACTGTT 58.449 47.619 0.00 0.00 34.14 3.16
459 460 2.936498 CTGTCTTCGTCAACCACTGTTT 59.064 45.455 0.00 0.00 30.42 2.83
460 461 2.933906 TGTCTTCGTCAACCACTGTTTC 59.066 45.455 0.00 0.00 30.42 2.78
461 462 3.195661 GTCTTCGTCAACCACTGTTTCT 58.804 45.455 0.00 0.00 30.42 2.52
462 463 3.621715 GTCTTCGTCAACCACTGTTTCTT 59.378 43.478 0.00 0.00 30.42 2.52
463 464 4.094442 GTCTTCGTCAACCACTGTTTCTTT 59.906 41.667 0.00 0.00 30.42 2.52
464 465 5.292589 GTCTTCGTCAACCACTGTTTCTTTA 59.707 40.000 0.00 0.00 30.42 1.85
465 466 5.292589 TCTTCGTCAACCACTGTTTCTTTAC 59.707 40.000 0.00 0.00 30.42 2.01
466 467 4.761975 TCGTCAACCACTGTTTCTTTACT 58.238 39.130 0.00 0.00 30.42 2.24
467 468 5.904941 TCGTCAACCACTGTTTCTTTACTA 58.095 37.500 0.00 0.00 30.42 1.82
468 469 6.339730 TCGTCAACCACTGTTTCTTTACTAA 58.660 36.000 0.00 0.00 30.42 2.24
469 470 6.817641 TCGTCAACCACTGTTTCTTTACTAAA 59.182 34.615 0.00 0.00 30.42 1.85
470 471 7.496591 TCGTCAACCACTGTTTCTTTACTAAAT 59.503 33.333 0.00 0.00 30.42 1.40
471 472 7.586300 CGTCAACCACTGTTTCTTTACTAAATG 59.414 37.037 0.00 0.00 30.42 2.32
472 473 8.403236 GTCAACCACTGTTTCTTTACTAAATGT 58.597 33.333 0.00 0.00 30.42 2.71
473 474 9.616156 TCAACCACTGTTTCTTTACTAAATGTA 57.384 29.630 0.00 0.00 30.42 2.29
493 494 9.719355 AAATGTATTGTCACTACATACAACAGA 57.281 29.630 14.28 0.00 38.53 3.41
494 495 8.703604 ATGTATTGTCACTACATACAACAGAC 57.296 34.615 12.75 0.00 37.89 3.51
495 496 6.804783 TGTATTGTCACTACATACAACAGACG 59.195 38.462 0.00 0.00 38.35 4.18
496 497 4.841443 TGTCACTACATACAACAGACGT 57.159 40.909 0.00 0.00 0.00 4.34
497 498 4.542735 TGTCACTACATACAACAGACGTG 58.457 43.478 0.00 0.00 0.00 4.49
498 499 4.037089 TGTCACTACATACAACAGACGTGT 59.963 41.667 0.00 0.00 39.19 4.49
499 500 4.381863 GTCACTACATACAACAGACGTGTG 59.618 45.833 11.72 11.72 36.84 3.82
500 501 4.037089 TCACTACATACAACAGACGTGTGT 59.963 41.667 13.32 13.32 41.03 3.72
501 502 4.148174 CACTACATACAACAGACGTGTGTG 59.852 45.833 20.04 15.06 38.86 3.82
502 503 2.479837 ACATACAACAGACGTGTGTGG 58.520 47.619 20.04 19.03 37.33 4.17
503 504 1.194547 CATACAACAGACGTGTGTGGC 59.805 52.381 20.04 0.00 36.84 5.01
504 505 0.531090 TACAACAGACGTGTGTGGCC 60.531 55.000 20.04 0.00 36.84 5.36
505 506 1.817520 CAACAGACGTGTGTGGCCA 60.818 57.895 20.04 0.00 36.84 5.36
506 507 1.078072 AACAGACGTGTGTGGCCAA 60.078 52.632 20.04 0.00 36.84 4.52
507 508 0.465460 AACAGACGTGTGTGGCCAAT 60.465 50.000 20.04 0.00 36.84 3.16
508 509 0.394938 ACAGACGTGTGTGGCCAATA 59.605 50.000 18.60 0.00 34.75 1.90
509 510 1.078709 CAGACGTGTGTGGCCAATAG 58.921 55.000 7.24 0.00 0.00 1.73
510 511 0.973632 AGACGTGTGTGGCCAATAGA 59.026 50.000 7.24 0.00 0.00 1.98
511 512 1.555075 AGACGTGTGTGGCCAATAGAT 59.445 47.619 7.24 0.00 0.00 1.98
512 513 1.665679 GACGTGTGTGGCCAATAGATG 59.334 52.381 7.24 6.54 0.00 2.90
527 528 6.764308 CAATAGATGGACACTTGGACATTT 57.236 37.500 0.00 0.00 0.00 2.32
528 529 7.161773 CAATAGATGGACACTTGGACATTTT 57.838 36.000 0.00 0.00 0.00 1.82
529 530 7.605449 CAATAGATGGACACTTGGACATTTTT 58.395 34.615 0.00 0.00 0.00 1.94
547 548 3.994931 TTTTCTAGGTCTACCCTTGCC 57.005 47.619 0.00 0.00 42.73 4.52
548 549 1.481871 TTCTAGGTCTACCCTTGCCG 58.518 55.000 0.00 0.00 42.73 5.69
549 550 0.627451 TCTAGGTCTACCCTTGCCGA 59.373 55.000 0.00 0.00 42.73 5.54
550 551 1.033574 CTAGGTCTACCCTTGCCGAG 58.966 60.000 0.00 0.00 42.73 4.63
551 552 0.396695 TAGGTCTACCCTTGCCGAGG 60.397 60.000 0.00 0.00 42.73 4.63
552 553 1.988406 GGTCTACCCTTGCCGAGGT 60.988 63.158 0.00 0.00 44.71 3.85
553 554 0.685458 GGTCTACCCTTGCCGAGGTA 60.685 60.000 0.00 0.00 44.71 3.08
556 557 2.587080 TACCCTTGCCGAGGTAGTG 58.413 57.895 0.00 0.00 44.71 2.74
623 624 5.703978 TTGATTGGATGAACGACAAACAT 57.296 34.783 0.00 0.00 29.17 2.71
721 722 8.911918 TTAAGTATTTTTGAAGGACTGTAGCA 57.088 30.769 0.00 0.00 0.00 3.49
722 723 7.440523 AAGTATTTTTGAAGGACTGTAGCAG 57.559 36.000 0.00 0.00 37.52 4.24
726 727 5.751243 TTTTGAAGGACTGTAGCAGAAAC 57.249 39.130 2.91 0.00 35.18 2.78
728 729 4.623932 TGAAGGACTGTAGCAGAAACAT 57.376 40.909 2.91 0.00 35.18 2.71
732 733 7.168219 TGAAGGACTGTAGCAGAAACATAATT 58.832 34.615 2.91 0.00 35.18 1.40
733 734 7.665559 TGAAGGACTGTAGCAGAAACATAATTT 59.334 33.333 2.91 0.00 35.18 1.82
739 740 6.616947 TGTAGCAGAAACATAATTTTTCCCG 58.383 36.000 0.00 0.00 34.07 5.14
776 778 6.597262 AACTTTTTAAACGGAAAATGCCAG 57.403 33.333 0.00 0.00 30.45 4.85
824 826 8.781067 TTTGAGTAACAAAACGAAATGAGATG 57.219 30.769 0.00 0.00 44.16 2.90
825 827 7.722795 TGAGTAACAAAACGAAATGAGATGA 57.277 32.000 0.00 0.00 0.00 2.92
826 828 8.322906 TGAGTAACAAAACGAAATGAGATGAT 57.677 30.769 0.00 0.00 0.00 2.45
827 829 9.430623 TGAGTAACAAAACGAAATGAGATGATA 57.569 29.630 0.00 0.00 0.00 2.15
828 830 9.690434 GAGTAACAAAACGAAATGAGATGATAC 57.310 33.333 0.00 0.00 0.00 2.24
829 831 9.214957 AGTAACAAAACGAAATGAGATGATACA 57.785 29.630 0.00 0.00 0.00 2.29
880 882 1.074248 CCCACGTTAGCCCACCTTT 59.926 57.895 0.00 0.00 0.00 3.11
910 912 1.304134 CCTTTACCCAGCCCACACC 60.304 63.158 0.00 0.00 0.00 4.16
911 913 1.458486 CTTTACCCAGCCCACACCA 59.542 57.895 0.00 0.00 0.00 4.17
912 914 0.893727 CTTTACCCAGCCCACACCAC 60.894 60.000 0.00 0.00 0.00 4.16
923 925 1.529226 CCACACCACCAAAAGCGATA 58.471 50.000 0.00 0.00 0.00 2.92
926 928 2.292016 CACACCACCAAAAGCGATAACA 59.708 45.455 0.00 0.00 0.00 2.41
927 929 2.292292 ACACCACCAAAAGCGATAACAC 59.708 45.455 0.00 0.00 0.00 3.32
928 930 2.292016 CACCACCAAAAGCGATAACACA 59.708 45.455 0.00 0.00 0.00 3.72
1149 1151 0.911769 TGCAATTCCTCGATCTGGGT 59.088 50.000 0.00 0.00 0.00 4.51
1187 1189 1.550524 TCTGACGATTTGGGGTCTCTG 59.449 52.381 0.00 0.00 34.31 3.35
1191 1193 0.179000 CGATTTGGGGTCTCTGGAGG 59.821 60.000 0.00 0.00 0.00 4.30
1249 1251 3.707316 CAAATGTGTAGGATTTGGGGGA 58.293 45.455 0.00 0.00 37.22 4.81
1252 1254 3.163616 TGTGTAGGATTTGGGGGAAAC 57.836 47.619 0.00 0.00 0.00 2.78
1253 1255 2.089201 GTGTAGGATTTGGGGGAAACG 58.911 52.381 0.00 0.00 0.00 3.60
1291 1293 2.499205 CCGAGCGCCATCTTACCA 59.501 61.111 2.29 0.00 0.00 3.25
1335 1337 3.128349 TGTTTAGCCTGTTCAGTTCGAC 58.872 45.455 0.00 0.00 0.00 4.20
1939 1944 1.068541 GTTTTGGTGAATGGAGACGGC 60.069 52.381 0.00 0.00 0.00 5.68
1945 1950 1.299976 GAATGGAGACGGCCCAGTT 59.700 57.895 0.00 0.25 37.08 3.16
2011 2016 1.817099 CATCGGCTCAGCAACTCCC 60.817 63.158 0.00 0.00 0.00 4.30
2191 2196 3.569701 GGCTTGAAAGTCTCCACAATCAA 59.430 43.478 0.00 0.00 31.94 2.57
2343 2348 4.266939 TGGTGACACCATCCCCAT 57.733 55.556 23.72 0.00 44.79 4.00
2363 2368 1.188863 AGTCCAGCCCATTCAAATGC 58.811 50.000 0.00 0.00 35.08 3.56
2447 2455 4.552166 ACGAACATTTCAACTGACAAGG 57.448 40.909 0.00 0.00 0.00 3.61
3428 3436 5.842907 ACTTTAATGAGGTTTGGAAAGTGC 58.157 37.500 0.00 0.00 36.16 4.40
3618 3626 5.790863 GAAGCGAGCTTTTGGCACAAATTT 61.791 41.667 11.92 0.00 44.79 1.82
3726 3740 6.571150 GCTTCAAATAGTTCAGCTTTGGATGT 60.571 38.462 0.00 0.00 32.15 3.06
3775 3801 2.417586 TCAGCATCTCAATGAACAAGCG 59.582 45.455 0.00 0.00 34.61 4.68
3811 3837 6.761099 TCTACAGAACTTGATGACTACCTC 57.239 41.667 0.00 0.00 0.00 3.85
3970 3996 3.984193 ATTCAGCAGCAGCGGACCC 62.984 63.158 2.91 0.00 44.62 4.46
4064 4091 7.878644 GGATGAGATAAAATGGTAAGGTCCTAC 59.121 40.741 0.00 0.00 0.00 3.18
4079 4106 1.203063 TCCTACACACTGCTCCACTCT 60.203 52.381 0.00 0.00 0.00 3.24
4096 4123 4.461081 CCACTCTACTATCATAGACCTGGC 59.539 50.000 0.00 0.00 0.00 4.85
4160 4187 5.423015 TGCCAGACATCTCTATTTTCTGTC 58.577 41.667 0.00 0.00 37.16 3.51
4403 4431 3.023832 TGGTCTCTTCATGCATCTACGA 58.976 45.455 0.00 0.00 0.00 3.43
4418 4446 6.091577 TGCATCTACGATTTATGTTTCGTTGT 59.908 34.615 3.14 0.00 45.62 3.32
4428 4456 8.706492 ATTTATGTTTCGTTGTCTATACCGAA 57.294 30.769 0.00 0.00 37.52 4.30
4448 4476 4.374707 CGAACACGCACTTTGTACTAGAAC 60.375 45.833 0.00 0.00 0.00 3.01
4465 4493 6.725364 ACTAGAACCAACTCCATTCATCATT 58.275 36.000 0.00 0.00 0.00 2.57
4466 4494 5.909621 AGAACCAACTCCATTCATCATTG 57.090 39.130 0.00 0.00 0.00 2.82
4488 4516 2.603075 TCTTTGCTTATTGCCAGGGT 57.397 45.000 0.00 0.00 42.00 4.34
4501 4529 2.306847 GCCAGGGTAATTGTACATGGG 58.693 52.381 10.59 0.10 38.31 4.00
4538 4566 3.119424 GGAATACCGCCTAGTAGATCAGC 60.119 52.174 0.00 0.00 0.00 4.26
4629 4657 2.276732 ATGTACCTGTGCCATATGCC 57.723 50.000 0.00 0.00 40.16 4.40
4691 4719 5.290493 TGTTTCAGACATCTGTGTAGGTT 57.710 39.130 8.70 0.00 44.12 3.50
4761 4792 2.270257 GGCTGCTGTTGACATGCCA 61.270 57.895 14.01 0.00 36.94 4.92
4877 4908 1.475403 TGCAGCTAGTAGGTGGAGTC 58.525 55.000 26.33 12.97 43.49 3.36
4879 4910 0.382515 CAGCTAGTAGGTGGAGTCGC 59.617 60.000 19.60 0.00 39.87 5.19
4895 4926 1.792949 GTCGCGAGTTTCTGAATGTGT 59.207 47.619 10.24 0.00 0.00 3.72
4898 4929 2.310577 GCGAGTTTCTGAATGTGTTGC 58.689 47.619 0.00 0.00 0.00 4.17
4931 4962 7.308229 GGGTGTATTGATGTCAGCATAAGAATC 60.308 40.741 0.00 0.00 35.07 2.52
4936 4967 7.725818 TTGATGTCAGCATAAGAATCTCATC 57.274 36.000 0.00 0.00 35.07 2.92
4937 4968 6.823497 TGATGTCAGCATAAGAATCTCATCA 58.177 36.000 3.77 3.77 37.42 3.07
4938 4969 7.277396 TGATGTCAGCATAAGAATCTCATCAA 58.723 34.615 5.03 0.00 37.03 2.57
4939 4970 7.937394 TGATGTCAGCATAAGAATCTCATCAAT 59.063 33.333 5.03 0.00 37.03 2.57
4941 4972 9.961264 ATGTCAGCATAAGAATCTCATCAATAT 57.039 29.630 0.00 0.00 32.73 1.28
4942 4973 9.788889 TGTCAGCATAAGAATCTCATCAATATT 57.211 29.630 0.00 0.00 0.00 1.28
4944 4975 9.788889 TCAGCATAAGAATCTCATCAATATTGT 57.211 29.630 14.97 0.43 0.00 2.71
4946 4977 9.788889 AGCATAAGAATCTCATCAATATTGTCA 57.211 29.630 14.97 0.00 0.00 3.58
4973 5004 3.016474 GAAGCGAGTTCCTGCGTGC 62.016 63.158 0.00 0.00 35.87 5.34
4983 5014 3.653009 CTGCGTGCCTGTGTGTGG 61.653 66.667 0.00 0.00 0.00 4.17
4997 5028 1.915489 TGTGTGGAGCCTATCAATGGT 59.085 47.619 0.00 0.00 0.00 3.55
5006 5037 8.947115 GTGGAGCCTATCAATGGTTAATAATAC 58.053 37.037 0.00 0.00 0.00 1.89
5026 5058 1.681166 CCCAGCCCAGTCTGAGAATTG 60.681 57.143 0.00 0.00 36.19 2.32
5057 5119 3.887335 TTCCCGAAACCGAAGCCCG 62.887 63.158 0.00 0.00 38.18 6.13
5070 5132 3.379608 GAAGCCCGGTAGGTTTCGGAA 62.380 57.143 0.00 0.00 44.74 4.30
5093 5155 0.338814 ACATCCGACCCCTACTCCTT 59.661 55.000 0.00 0.00 0.00 3.36
5094 5156 1.041437 CATCCGACCCCTACTCCTTC 58.959 60.000 0.00 0.00 0.00 3.46
5097 5159 0.613853 CCGACCCCTACTCCTTCACA 60.614 60.000 0.00 0.00 0.00 3.58
5103 5165 2.636830 CCCTACTCCTTCACAGCAATG 58.363 52.381 0.00 0.00 0.00 2.82
5131 5193 2.119671 GCAGCGGGCATAAAATACAC 57.880 50.000 0.00 0.00 43.97 2.90
5132 5194 1.269051 GCAGCGGGCATAAAATACACC 60.269 52.381 0.00 0.00 43.97 4.16
5138 5200 1.263217 GGCATAAAATACACCCGAGCG 59.737 52.381 0.00 0.00 0.00 5.03
5165 5227 3.665190 GCGCCTAGGAAGCAGTTTATAT 58.335 45.455 14.75 0.00 0.00 0.86
5166 5228 4.617530 CGCGCCTAGGAAGCAGTTTATATA 60.618 45.833 23.56 0.00 0.00 0.86
5167 5229 5.420409 GCGCCTAGGAAGCAGTTTATATAT 58.580 41.667 14.75 0.00 0.00 0.86
5168 5230 6.570692 GCGCCTAGGAAGCAGTTTATATATA 58.429 40.000 14.75 0.00 0.00 0.86
5212 5274 5.407407 AACTTGCTTCTATCTCGAGGAAA 57.593 39.130 13.56 0.00 0.00 3.13
5247 5309 0.467290 GCACAGGGGGAGAAACACAA 60.467 55.000 0.00 0.00 0.00 3.33
5351 5413 1.004277 CGTGTCCTGAGACTCAACGC 61.004 60.000 12.92 11.31 43.91 4.84
5376 5438 1.987807 ATGGTTCGGAGGCCATGGAG 61.988 60.000 18.40 0.30 40.74 3.86
5406 5468 1.884579 GGTAGACTCGTCTGTCAACCA 59.115 52.381 9.73 0.00 40.71 3.67
5411 5473 1.902508 ACTCGTCTGTCAACCATCCAT 59.097 47.619 0.00 0.00 0.00 3.41
5441 5503 0.527113 TCGCGTGTTTCTCGGGATTA 59.473 50.000 5.77 0.00 43.15 1.75
5456 5518 2.116238 GGATTACAGTACCTCCCTGCA 58.884 52.381 0.00 0.00 33.09 4.41
5483 5545 1.837051 TCACCGGTCACTTGGCTCT 60.837 57.895 2.59 0.00 0.00 4.09
5625 5687 2.046988 CGCATGGTCACCTGCTCA 60.047 61.111 14.13 0.00 36.23 4.26
5665 5727 2.383527 GGCGAGTCTGACTTTGCGG 61.384 63.158 21.73 8.73 32.74 5.69
5678 5740 2.887152 ACTTTGCGGATTTCAAGAAGCT 59.113 40.909 0.00 0.00 0.00 3.74
5702 5764 0.915364 GCCTCCAAGATCCTTGACCT 59.085 55.000 8.16 0.00 0.00 3.85
5775 5837 0.107508 CCATCCATCGTGGCTTGTCT 60.108 55.000 0.00 0.00 37.47 3.41
5850 5912 0.824109 TGGATTGGATCGACGAGCTT 59.176 50.000 13.43 0.00 0.00 3.74
5995 6057 3.119280 CGGACATGAGGTACACACATACA 60.119 47.826 0.00 0.00 0.00 2.29
6041 6103 5.652452 AGTGAGGCTGTTAGTTTTCAAAGTT 59.348 36.000 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.267426 TCGATGCTGATTGTAACACCG 58.733 47.619 0.00 0.00 0.00 4.94
1 2 3.521560 TCTCGATGCTGATTGTAACACC 58.478 45.455 0.00 0.00 0.00 4.16
2 3 4.805719 TCATCTCGATGCTGATTGTAACAC 59.194 41.667 2.05 0.00 38.65 3.32
3 4 5.009854 TCATCTCGATGCTGATTGTAACA 57.990 39.130 2.05 0.00 38.65 2.41
4 5 5.913637 CATCATCTCGATGCTGATTGTAAC 58.086 41.667 5.10 0.00 44.95 2.50
15 16 6.183360 CCATTGAATGATCCATCATCTCGATG 60.183 42.308 20.00 20.00 46.22 3.84
16 17 5.880887 CCATTGAATGATCCATCATCTCGAT 59.119 40.000 6.76 5.86 46.22 3.59
17 18 5.221783 ACCATTGAATGATCCATCATCTCGA 60.222 40.000 6.76 4.11 46.22 4.04
18 19 5.001874 ACCATTGAATGATCCATCATCTCG 58.998 41.667 6.76 0.00 46.22 4.04
19 20 5.121925 CGACCATTGAATGATCCATCATCTC 59.878 44.000 6.76 4.32 46.22 2.75
20 21 5.001874 CGACCATTGAATGATCCATCATCT 58.998 41.667 6.76 0.00 46.22 2.90
21 22 4.379186 GCGACCATTGAATGATCCATCATC 60.379 45.833 6.76 0.00 46.22 2.92
23 24 2.880268 GCGACCATTGAATGATCCATCA 59.120 45.455 6.76 0.00 41.70 3.07
24 25 2.880268 TGCGACCATTGAATGATCCATC 59.120 45.455 6.76 0.00 0.00 3.51
25 26 2.934887 TGCGACCATTGAATGATCCAT 58.065 42.857 6.76 0.00 0.00 3.41
26 27 2.416680 TGCGACCATTGAATGATCCA 57.583 45.000 6.76 0.00 0.00 3.41
27 28 3.058432 CAGATGCGACCATTGAATGATCC 60.058 47.826 6.76 0.00 0.00 3.36
28 29 3.608707 GCAGATGCGACCATTGAATGATC 60.609 47.826 6.76 0.00 0.00 2.92
29 30 2.292569 GCAGATGCGACCATTGAATGAT 59.707 45.455 6.76 0.00 0.00 2.45
30 31 1.672363 GCAGATGCGACCATTGAATGA 59.328 47.619 6.76 0.00 0.00 2.57
31 32 1.268896 GGCAGATGCGACCATTGAATG 60.269 52.381 0.00 0.00 43.26 2.67
32 33 1.027357 GGCAGATGCGACCATTGAAT 58.973 50.000 0.00 0.00 43.26 2.57
33 34 0.322366 TGGCAGATGCGACCATTGAA 60.322 50.000 0.00 0.00 43.26 2.69
34 35 0.322366 TTGGCAGATGCGACCATTGA 60.322 50.000 0.00 0.00 43.26 2.57
35 36 0.742505 ATTGGCAGATGCGACCATTG 59.257 50.000 0.00 0.00 43.26 2.82
36 37 1.949525 GTATTGGCAGATGCGACCATT 59.050 47.619 0.00 0.00 43.26 3.16
37 38 1.141657 AGTATTGGCAGATGCGACCAT 59.858 47.619 0.00 0.00 43.26 3.55
38 39 0.541392 AGTATTGGCAGATGCGACCA 59.459 50.000 0.00 0.00 43.26 4.02
39 40 1.599542 GAAGTATTGGCAGATGCGACC 59.400 52.381 0.00 0.00 43.26 4.79
40 41 2.030946 GTGAAGTATTGGCAGATGCGAC 59.969 50.000 0.00 0.00 43.26 5.19
41 42 2.279741 GTGAAGTATTGGCAGATGCGA 58.720 47.619 0.00 0.00 43.26 5.10
42 43 1.004610 CGTGAAGTATTGGCAGATGCG 60.005 52.381 0.00 0.00 43.26 4.73
43 44 1.268234 GCGTGAAGTATTGGCAGATGC 60.268 52.381 0.00 0.00 41.14 3.91
44 45 1.331756 GGCGTGAAGTATTGGCAGATG 59.668 52.381 0.00 0.00 0.00 2.90
45 46 1.065491 TGGCGTGAAGTATTGGCAGAT 60.065 47.619 0.00 0.00 32.71 2.90
46 47 0.323302 TGGCGTGAAGTATTGGCAGA 59.677 50.000 0.00 0.00 32.71 4.26
47 48 0.729116 CTGGCGTGAAGTATTGGCAG 59.271 55.000 0.19 0.19 46.38 4.85
48 49 0.676466 CCTGGCGTGAAGTATTGGCA 60.676 55.000 0.00 0.00 35.46 4.92
49 50 0.676782 ACCTGGCGTGAAGTATTGGC 60.677 55.000 0.00 0.00 0.00 4.52
50 51 1.338674 TGACCTGGCGTGAAGTATTGG 60.339 52.381 0.00 0.00 0.00 3.16
51 52 2.093306 TGACCTGGCGTGAAGTATTG 57.907 50.000 0.00 0.00 0.00 1.90
52 53 2.851263 TTGACCTGGCGTGAAGTATT 57.149 45.000 0.00 0.00 0.00 1.89
53 54 2.851263 TTTGACCTGGCGTGAAGTAT 57.149 45.000 0.00 0.00 0.00 2.12
54 55 2.623878 TTTTGACCTGGCGTGAAGTA 57.376 45.000 0.00 0.00 0.00 2.24
55 56 1.608590 CATTTTGACCTGGCGTGAAGT 59.391 47.619 0.00 0.00 0.00 3.01
56 57 1.879380 TCATTTTGACCTGGCGTGAAG 59.121 47.619 0.00 0.00 0.00 3.02
57 58 1.606668 GTCATTTTGACCTGGCGTGAA 59.393 47.619 0.00 0.00 41.37 3.18
58 59 1.234821 GTCATTTTGACCTGGCGTGA 58.765 50.000 0.00 0.00 41.37 4.35
59 60 0.950836 TGTCATTTTGACCTGGCGTG 59.049 50.000 5.27 0.00 46.40 5.34
60 61 0.951558 GTGTCATTTTGACCTGGCGT 59.048 50.000 5.27 0.00 46.40 5.68
61 62 1.238439 AGTGTCATTTTGACCTGGCG 58.762 50.000 5.27 0.00 46.40 5.69
62 63 5.066505 CCTTATAGTGTCATTTTGACCTGGC 59.933 44.000 5.27 0.00 46.40 4.85
63 64 6.180472 ACCTTATAGTGTCATTTTGACCTGG 58.820 40.000 5.27 0.00 46.40 4.45
64 65 7.687941 AACCTTATAGTGTCATTTTGACCTG 57.312 36.000 5.27 0.00 46.40 4.00
65 66 9.975218 ATTAACCTTATAGTGTCATTTTGACCT 57.025 29.630 5.27 4.96 46.40 3.85
68 69 9.967451 TCCATTAACCTTATAGTGTCATTTTGA 57.033 29.630 0.00 0.00 0.00 2.69
70 71 9.747898 TGTCCATTAACCTTATAGTGTCATTTT 57.252 29.630 0.00 0.00 0.00 1.82
71 72 9.920946 ATGTCCATTAACCTTATAGTGTCATTT 57.079 29.630 0.00 0.00 0.00 2.32
72 73 9.561069 GATGTCCATTAACCTTATAGTGTCATT 57.439 33.333 0.00 0.00 0.00 2.57
73 74 8.938883 AGATGTCCATTAACCTTATAGTGTCAT 58.061 33.333 0.00 0.00 0.00 3.06
74 75 8.319057 AGATGTCCATTAACCTTATAGTGTCA 57.681 34.615 0.00 0.00 0.00 3.58
75 76 9.262358 GAAGATGTCCATTAACCTTATAGTGTC 57.738 37.037 0.00 0.00 0.00 3.67
76 77 8.211629 GGAAGATGTCCATTAACCTTATAGTGT 58.788 37.037 0.00 0.00 46.97 3.55
77 78 8.608844 GGAAGATGTCCATTAACCTTATAGTG 57.391 38.462 0.00 0.00 46.97 2.74
93 94 5.512232 GGATGGTCTAAGATGGGAAGATGTC 60.512 48.000 0.00 0.00 0.00 3.06
94 95 4.349342 GGATGGTCTAAGATGGGAAGATGT 59.651 45.833 0.00 0.00 0.00 3.06
95 96 4.263243 GGGATGGTCTAAGATGGGAAGATG 60.263 50.000 0.00 0.00 0.00 2.90
96 97 3.913163 GGGATGGTCTAAGATGGGAAGAT 59.087 47.826 0.00 0.00 0.00 2.40
97 98 3.318313 GGGATGGTCTAAGATGGGAAGA 58.682 50.000 0.00 0.00 0.00 2.87
98 99 2.373502 GGGGATGGTCTAAGATGGGAAG 59.626 54.545 0.00 0.00 0.00 3.46
99 100 2.294195 TGGGGATGGTCTAAGATGGGAA 60.294 50.000 0.00 0.00 0.00 3.97
100 101 1.296832 TGGGGATGGTCTAAGATGGGA 59.703 52.381 0.00 0.00 0.00 4.37
101 102 1.421646 GTGGGGATGGTCTAAGATGGG 59.578 57.143 0.00 0.00 0.00 4.00
102 103 1.070758 CGTGGGGATGGTCTAAGATGG 59.929 57.143 0.00 0.00 0.00 3.51
103 104 1.070758 CCGTGGGGATGGTCTAAGATG 59.929 57.143 0.00 0.00 34.06 2.90
104 105 1.344087 ACCGTGGGGATGGTCTAAGAT 60.344 52.381 0.00 0.00 31.16 2.40
105 106 0.042131 ACCGTGGGGATGGTCTAAGA 59.958 55.000 0.00 0.00 31.16 2.10
106 107 0.909623 AACCGTGGGGATGGTCTAAG 59.090 55.000 0.00 0.00 37.54 2.18
107 108 0.906775 GAACCGTGGGGATGGTCTAA 59.093 55.000 0.00 0.00 37.54 2.10
108 109 0.042131 AGAACCGTGGGGATGGTCTA 59.958 55.000 0.00 0.00 37.54 2.59
109 110 1.229529 AGAACCGTGGGGATGGTCT 60.230 57.895 0.00 0.00 37.54 3.85
110 111 1.078426 CAGAACCGTGGGGATGGTC 60.078 63.158 0.00 0.00 37.54 4.02
111 112 1.537889 TCAGAACCGTGGGGATGGT 60.538 57.895 0.00 0.00 41.20 3.55
112 113 1.221840 CTCAGAACCGTGGGGATGG 59.778 63.158 0.00 0.00 36.97 3.51
113 114 1.221840 CCTCAGAACCGTGGGGATG 59.778 63.158 0.00 0.00 41.16 3.51
114 115 1.995626 CCCTCAGAACCGTGGGGAT 60.996 63.158 0.00 0.00 41.16 3.85
115 116 2.606519 CCCTCAGAACCGTGGGGA 60.607 66.667 0.00 0.00 41.16 4.81
117 118 2.928396 ACCCCTCAGAACCGTGGG 60.928 66.667 0.00 0.00 42.23 4.61
118 119 2.347490 CACCCCTCAGAACCGTGG 59.653 66.667 0.00 0.00 0.00 4.94
119 120 2.358737 GCACCCCTCAGAACCGTG 60.359 66.667 0.00 0.00 0.00 4.94
120 121 3.637273 GGCACCCCTCAGAACCGT 61.637 66.667 0.00 0.00 0.00 4.83
121 122 2.971598 ATGGCACCCCTCAGAACCG 61.972 63.158 0.00 0.00 0.00 4.44
122 123 1.379044 CATGGCACCCCTCAGAACC 60.379 63.158 0.00 0.00 0.00 3.62
123 124 0.678048 GACATGGCACCCCTCAGAAC 60.678 60.000 0.00 0.00 0.00 3.01
124 125 0.842030 AGACATGGCACCCCTCAGAA 60.842 55.000 0.00 0.00 0.00 3.02
125 126 1.229625 AGACATGGCACCCCTCAGA 60.230 57.895 0.00 0.00 0.00 3.27
126 127 1.222936 GAGACATGGCACCCCTCAG 59.777 63.158 0.00 0.00 0.00 3.35
127 128 2.659063 CGAGACATGGCACCCCTCA 61.659 63.158 0.00 0.00 0.00 3.86
128 129 2.187946 CGAGACATGGCACCCCTC 59.812 66.667 0.00 0.00 0.00 4.30
129 130 2.607750 ACGAGACATGGCACCCCT 60.608 61.111 0.00 0.00 0.00 4.79
130 131 2.125106 GACGAGACATGGCACCCC 60.125 66.667 0.00 0.00 0.00 4.95
131 132 0.464036 TATGACGAGACATGGCACCC 59.536 55.000 0.00 0.00 0.00 4.61
132 133 2.309528 TTATGACGAGACATGGCACC 57.690 50.000 0.00 0.00 0.00 5.01
133 134 3.492383 CAGATTATGACGAGACATGGCAC 59.508 47.826 0.00 0.00 0.00 5.01
134 135 3.721035 CAGATTATGACGAGACATGGCA 58.279 45.455 0.00 0.00 0.00 4.92
135 136 2.478134 GCAGATTATGACGAGACATGGC 59.522 50.000 0.00 0.00 0.00 4.40
136 137 3.062763 GGCAGATTATGACGAGACATGG 58.937 50.000 0.00 0.00 0.00 3.66
137 138 3.739810 CAGGCAGATTATGACGAGACATG 59.260 47.826 0.00 0.00 44.27 3.21
138 139 3.386078 ACAGGCAGATTATGACGAGACAT 59.614 43.478 0.00 0.00 44.27 3.06
139 140 2.760650 ACAGGCAGATTATGACGAGACA 59.239 45.455 0.00 0.00 44.27 3.41
140 141 3.119291 CACAGGCAGATTATGACGAGAC 58.881 50.000 0.00 0.00 44.27 3.36
141 142 2.481969 GCACAGGCAGATTATGACGAGA 60.482 50.000 0.00 0.00 44.27 4.04
142 143 1.863454 GCACAGGCAGATTATGACGAG 59.137 52.381 0.00 0.00 44.27 4.18
143 144 1.473257 GGCACAGGCAGATTATGACGA 60.473 52.381 0.00 0.00 44.27 4.20
144 145 0.940126 GGCACAGGCAGATTATGACG 59.060 55.000 0.00 0.00 44.27 4.35
145 146 2.042686 TGGCACAGGCAGATTATGAC 57.957 50.000 0.00 0.00 43.71 3.06
158 159 2.510411 CCAGTGTGGTCTGGCACA 59.490 61.111 0.00 0.00 46.53 4.57
177 178 0.728466 GACGCTACGGTGTGACTCAC 60.728 60.000 1.86 1.86 45.47 3.51
178 179 0.887836 AGACGCTACGGTGTGACTCA 60.888 55.000 0.00 0.00 36.19 3.41
179 180 1.081892 TAGACGCTACGGTGTGACTC 58.918 55.000 0.00 0.00 36.19 3.36
180 181 1.669779 GATAGACGCTACGGTGTGACT 59.330 52.381 0.00 0.00 36.19 3.41
181 182 1.399440 TGATAGACGCTACGGTGTGAC 59.601 52.381 0.00 0.00 36.19 3.67
182 183 1.741528 TGATAGACGCTACGGTGTGA 58.258 50.000 0.00 0.00 36.19 3.58
183 184 2.776312 ATGATAGACGCTACGGTGTG 57.224 50.000 0.00 0.00 36.19 3.82
184 185 4.277672 ACAATATGATAGACGCTACGGTGT 59.722 41.667 0.00 0.00 39.06 4.16
185 186 4.795268 ACAATATGATAGACGCTACGGTG 58.205 43.478 0.00 0.00 0.00 4.94
186 187 5.220381 CAACAATATGATAGACGCTACGGT 58.780 41.667 0.00 0.00 0.00 4.83
187 188 4.621460 CCAACAATATGATAGACGCTACGG 59.379 45.833 0.00 0.00 0.00 4.02
188 189 5.458015 TCCAACAATATGATAGACGCTACG 58.542 41.667 0.00 0.00 0.00 3.51
189 190 5.346281 GCTCCAACAATATGATAGACGCTAC 59.654 44.000 0.00 0.00 0.00 3.58
190 191 5.470368 GCTCCAACAATATGATAGACGCTA 58.530 41.667 0.00 0.00 0.00 4.26
191 192 4.310769 GCTCCAACAATATGATAGACGCT 58.689 43.478 0.00 0.00 0.00 5.07
192 193 3.433615 GGCTCCAACAATATGATAGACGC 59.566 47.826 0.00 0.00 0.00 5.19
193 194 3.675225 CGGCTCCAACAATATGATAGACG 59.325 47.826 0.00 0.00 31.48 4.18
194 195 4.632153 ACGGCTCCAACAATATGATAGAC 58.368 43.478 0.00 0.00 0.00 2.59
195 196 4.955811 ACGGCTCCAACAATATGATAGA 57.044 40.909 0.00 0.00 0.00 1.98
196 197 6.313905 GGATAACGGCTCCAACAATATGATAG 59.686 42.308 0.00 0.00 32.72 2.08
197 198 6.170506 GGATAACGGCTCCAACAATATGATA 58.829 40.000 0.00 0.00 32.72 2.15
198 199 5.003804 GGATAACGGCTCCAACAATATGAT 58.996 41.667 0.00 0.00 32.72 2.45
199 200 4.385825 GGATAACGGCTCCAACAATATGA 58.614 43.478 0.00 0.00 32.72 2.15
200 201 3.186409 CGGATAACGGCTCCAACAATATG 59.814 47.826 0.00 0.00 39.42 1.78
201 202 3.399330 CGGATAACGGCTCCAACAATAT 58.601 45.455 0.00 0.00 39.42 1.28
202 203 2.828877 CGGATAACGGCTCCAACAATA 58.171 47.619 0.00 0.00 39.42 1.90
203 204 1.663695 CGGATAACGGCTCCAACAAT 58.336 50.000 0.00 0.00 39.42 2.71
204 205 1.022451 GCGGATAACGGCTCCAACAA 61.022 55.000 0.00 0.00 44.51 2.83
205 206 1.448893 GCGGATAACGGCTCCAACA 60.449 57.895 0.00 0.00 44.51 3.33
206 207 0.103572 TAGCGGATAACGGCTCCAAC 59.896 55.000 8.34 0.00 46.93 3.77
207 208 0.103572 GTAGCGGATAACGGCTCCAA 59.896 55.000 8.34 0.00 46.93 3.53
208 209 0.754217 AGTAGCGGATAACGGCTCCA 60.754 55.000 8.34 0.00 46.93 3.86
209 210 1.068679 GTAGTAGCGGATAACGGCTCC 60.069 57.143 8.34 0.00 46.93 4.70
210 211 1.605710 TGTAGTAGCGGATAACGGCTC 59.394 52.381 8.34 1.99 46.93 4.70
212 213 2.288030 ACATGTAGTAGCGGATAACGGC 60.288 50.000 0.00 0.00 44.51 5.68
213 214 3.562505 GACATGTAGTAGCGGATAACGG 58.437 50.000 0.00 0.00 44.51 4.44
214 215 3.908138 CCGACATGTAGTAGCGGATAACG 60.908 52.174 15.79 2.82 44.43 3.18
215 216 3.562505 CCGACATGTAGTAGCGGATAAC 58.437 50.000 15.79 0.00 44.43 1.89
216 217 2.030540 GCCGACATGTAGTAGCGGATAA 60.031 50.000 22.88 0.00 44.43 1.75
217 218 1.538512 GCCGACATGTAGTAGCGGATA 59.461 52.381 22.88 0.00 44.43 2.59
218 219 0.314302 GCCGACATGTAGTAGCGGAT 59.686 55.000 22.88 0.00 44.43 4.18
219 220 1.731700 GCCGACATGTAGTAGCGGA 59.268 57.895 22.88 0.00 44.43 5.54
220 221 1.657487 CGCCGACATGTAGTAGCGG 60.657 63.158 16.35 16.35 44.73 5.52
221 222 1.657487 CCGCCGACATGTAGTAGCG 60.657 63.158 17.95 17.95 46.75 4.26
222 223 0.870307 CACCGCCGACATGTAGTAGC 60.870 60.000 0.00 0.00 0.00 3.58
223 224 0.736636 TCACCGCCGACATGTAGTAG 59.263 55.000 0.00 0.00 0.00 2.57
224 225 1.133598 CTTCACCGCCGACATGTAGTA 59.866 52.381 0.00 0.00 0.00 1.82
225 226 0.108804 CTTCACCGCCGACATGTAGT 60.109 55.000 0.00 0.00 0.00 2.73
226 227 0.172578 TCTTCACCGCCGACATGTAG 59.827 55.000 0.00 0.00 0.00 2.74
227 228 0.172578 CTCTTCACCGCCGACATGTA 59.827 55.000 0.00 0.00 0.00 2.29
228 229 1.079819 CTCTTCACCGCCGACATGT 60.080 57.895 0.00 0.00 0.00 3.21
229 230 2.456119 GCTCTTCACCGCCGACATG 61.456 63.158 0.00 0.00 0.00 3.21
230 231 2.125512 GCTCTTCACCGCCGACAT 60.126 61.111 0.00 0.00 0.00 3.06
231 232 4.373116 GGCTCTTCACCGCCGACA 62.373 66.667 0.00 0.00 36.45 4.35
238 239 3.567797 GCGCATCGGCTCTTCACC 61.568 66.667 0.30 0.00 38.10 4.02
247 248 2.280186 GAGTAAGGGGCGCATCGG 60.280 66.667 10.83 0.00 0.00 4.18
248 249 2.280186 GGAGTAAGGGGCGCATCG 60.280 66.667 10.83 0.00 0.00 3.84
249 250 2.111251 GGGAGTAAGGGGCGCATC 59.889 66.667 10.83 0.00 0.00 3.91
250 251 3.489513 GGGGAGTAAGGGGCGCAT 61.490 66.667 10.83 0.00 0.00 4.73
252 253 4.484872 GTGGGGAGTAAGGGGCGC 62.485 72.222 0.00 0.00 0.00 6.53
253 254 3.793888 GGTGGGGAGTAAGGGGCG 61.794 72.222 0.00 0.00 0.00 6.13
254 255 3.417779 GGGTGGGGAGTAAGGGGC 61.418 72.222 0.00 0.00 0.00 5.80
255 256 1.693103 GAGGGTGGGGAGTAAGGGG 60.693 68.421 0.00 0.00 0.00 4.79
256 257 1.082206 TGAGGGTGGGGAGTAAGGG 59.918 63.158 0.00 0.00 0.00 3.95
257 258 0.546747 TGTGAGGGTGGGGAGTAAGG 60.547 60.000 0.00 0.00 0.00 2.69
258 259 0.613777 GTGTGAGGGTGGGGAGTAAG 59.386 60.000 0.00 0.00 0.00 2.34
259 260 0.104882 TGTGTGAGGGTGGGGAGTAA 60.105 55.000 0.00 0.00 0.00 2.24
260 261 0.834687 GTGTGTGAGGGTGGGGAGTA 60.835 60.000 0.00 0.00 0.00 2.59
261 262 2.147387 GTGTGTGAGGGTGGGGAGT 61.147 63.158 0.00 0.00 0.00 3.85
262 263 0.544357 TAGTGTGTGAGGGTGGGGAG 60.544 60.000 0.00 0.00 0.00 4.30
263 264 0.834687 GTAGTGTGTGAGGGTGGGGA 60.835 60.000 0.00 0.00 0.00 4.81
264 265 1.677552 GTAGTGTGTGAGGGTGGGG 59.322 63.158 0.00 0.00 0.00 4.96
265 266 1.677552 GGTAGTGTGTGAGGGTGGG 59.322 63.158 0.00 0.00 0.00 4.61
266 267 1.292223 CGGTAGTGTGTGAGGGTGG 59.708 63.158 0.00 0.00 0.00 4.61
267 268 1.374252 GCGGTAGTGTGTGAGGGTG 60.374 63.158 0.00 0.00 0.00 4.61
268 269 1.533273 AGCGGTAGTGTGTGAGGGT 60.533 57.895 0.00 0.00 0.00 4.34
269 270 1.079819 CAGCGGTAGTGTGTGAGGG 60.080 63.158 0.00 0.00 0.00 4.30
270 271 1.079819 CCAGCGGTAGTGTGTGAGG 60.080 63.158 0.00 0.00 0.00 3.86
271 272 1.738099 GCCAGCGGTAGTGTGTGAG 60.738 63.158 0.00 0.00 0.00 3.51
272 273 2.342279 GCCAGCGGTAGTGTGTGA 59.658 61.111 0.00 0.00 0.00 3.58
273 274 3.112075 CGCCAGCGGTAGTGTGTG 61.112 66.667 3.61 0.00 35.56 3.82
274 275 3.612681 ACGCCAGCGGTAGTGTGT 61.613 61.111 17.33 0.00 44.69 3.72
275 276 3.112075 CACGCCAGCGGTAGTGTG 61.112 66.667 17.33 12.01 44.69 3.82
276 277 3.282745 CTCACGCCAGCGGTAGTGT 62.283 63.158 17.33 5.32 44.69 3.55
277 278 2.284798 ATCTCACGCCAGCGGTAGTG 62.285 60.000 17.33 5.52 44.69 2.74
278 279 2.052690 ATCTCACGCCAGCGGTAGT 61.053 57.895 17.33 1.96 44.69 2.73
279 280 1.589993 CATCTCACGCCAGCGGTAG 60.590 63.158 17.33 12.59 44.69 3.18
280 281 2.494445 CATCTCACGCCAGCGGTA 59.506 61.111 17.33 2.70 44.69 4.02
281 282 4.457496 CCATCTCACGCCAGCGGT 62.457 66.667 17.33 0.00 44.69 5.68
282 283 4.457496 ACCATCTCACGCCAGCGG 62.457 66.667 17.33 5.62 44.69 5.52
283 284 2.887568 GACCATCTCACGCCAGCG 60.888 66.667 11.05 11.05 46.03 5.18
284 285 2.887568 CGACCATCTCACGCCAGC 60.888 66.667 0.00 0.00 0.00 4.85
285 286 2.887568 GCGACCATCTCACGCCAG 60.888 66.667 0.00 0.00 45.35 4.85
289 290 1.003331 GAGAGTAGCGACCATCTCACG 60.003 57.143 10.18 0.00 38.43 4.35
290 291 1.003331 CGAGAGTAGCGACCATCTCAC 60.003 57.143 13.91 0.00 38.46 3.51
291 292 1.300481 CGAGAGTAGCGACCATCTCA 58.700 55.000 13.91 0.00 38.46 3.27
292 293 0.040781 GCGAGAGTAGCGACCATCTC 60.041 60.000 6.26 6.26 35.82 2.75
293 294 0.748367 TGCGAGAGTAGCGACCATCT 60.748 55.000 0.00 0.00 37.44 2.90
294 295 0.592754 GTGCGAGAGTAGCGACCATC 60.593 60.000 0.00 0.00 37.44 3.51
295 296 1.433879 GTGCGAGAGTAGCGACCAT 59.566 57.895 0.00 0.00 37.44 3.55
296 297 2.697761 GGTGCGAGAGTAGCGACCA 61.698 63.158 0.00 0.00 36.50 4.02
297 298 2.102553 GGTGCGAGAGTAGCGACC 59.897 66.667 0.00 0.00 37.44 4.79
301 302 2.202810 GCCAGGTGCGAGAGTAGC 60.203 66.667 0.00 0.00 44.78 3.58
302 303 0.037326 TTTGCCAGGTGCGAGAGTAG 60.037 55.000 0.00 0.00 45.60 2.57
303 304 0.394938 TTTTGCCAGGTGCGAGAGTA 59.605 50.000 0.00 0.00 45.60 2.59
304 305 0.250901 ATTTTGCCAGGTGCGAGAGT 60.251 50.000 0.00 0.00 45.60 3.24
305 306 0.449388 GATTTTGCCAGGTGCGAGAG 59.551 55.000 0.00 0.00 45.60 3.20
306 307 0.960364 GGATTTTGCCAGGTGCGAGA 60.960 55.000 0.00 0.00 45.60 4.04
307 308 1.508088 GGATTTTGCCAGGTGCGAG 59.492 57.895 0.00 0.00 45.60 5.03
308 309 1.976474 GGGATTTTGCCAGGTGCGA 60.976 57.895 0.00 0.00 45.60 5.10
309 310 2.274645 TGGGATTTTGCCAGGTGCG 61.275 57.895 0.00 0.00 45.60 5.34
310 311 3.790223 TGGGATTTTGCCAGGTGC 58.210 55.556 0.00 0.00 30.85 5.01
315 316 1.786937 ACACAACTGGGATTTTGCCA 58.213 45.000 0.00 0.00 34.62 4.92
316 317 2.482864 CAACACAACTGGGATTTTGCC 58.517 47.619 0.00 0.00 0.00 4.52
317 318 1.866601 GCAACACAACTGGGATTTTGC 59.133 47.619 0.00 0.00 0.00 3.68
318 319 2.158986 TGGCAACACAACTGGGATTTTG 60.159 45.455 0.00 0.00 46.17 2.44
319 320 2.114616 TGGCAACACAACTGGGATTTT 58.885 42.857 0.00 0.00 46.17 1.82
320 321 1.786937 TGGCAACACAACTGGGATTT 58.213 45.000 0.00 0.00 46.17 2.17
321 322 3.529948 TGGCAACACAACTGGGATT 57.470 47.368 0.00 0.00 46.17 3.01
333 334 0.388659 TGTGGATGCTTGTTGGCAAC 59.611 50.000 23.12 23.12 45.68 4.17
334 335 1.273048 GATGTGGATGCTTGTTGGCAA 59.727 47.619 0.00 0.00 45.68 4.52
335 336 0.889994 GATGTGGATGCTTGTTGGCA 59.110 50.000 0.00 0.00 46.63 4.92
336 337 0.889994 TGATGTGGATGCTTGTTGGC 59.110 50.000 0.00 0.00 0.00 4.52
337 338 3.243301 GCTATGATGTGGATGCTTGTTGG 60.243 47.826 0.00 0.00 0.00 3.77
338 339 3.547413 CGCTATGATGTGGATGCTTGTTG 60.547 47.826 0.00 0.00 0.00 3.33
339 340 2.615447 CGCTATGATGTGGATGCTTGTT 59.385 45.455 0.00 0.00 0.00 2.83
340 341 2.158914 TCGCTATGATGTGGATGCTTGT 60.159 45.455 0.00 0.00 0.00 3.16
341 342 2.479275 CTCGCTATGATGTGGATGCTTG 59.521 50.000 0.00 0.00 0.00 4.01
342 343 2.763933 CTCGCTATGATGTGGATGCTT 58.236 47.619 0.00 0.00 0.00 3.91
343 344 1.607509 GCTCGCTATGATGTGGATGCT 60.608 52.381 0.00 0.00 0.00 3.79
344 345 0.795085 GCTCGCTATGATGTGGATGC 59.205 55.000 0.00 0.00 0.00 3.91
345 346 1.066136 CGCTCGCTATGATGTGGATG 58.934 55.000 0.00 0.00 0.00 3.51
346 347 0.961753 TCGCTCGCTATGATGTGGAT 59.038 50.000 0.00 0.00 0.00 3.41
347 348 0.030773 GTCGCTCGCTATGATGTGGA 59.969 55.000 0.00 0.00 0.00 4.02
348 349 0.941463 GGTCGCTCGCTATGATGTGG 60.941 60.000 0.00 0.00 0.00 4.17
349 350 0.249031 TGGTCGCTCGCTATGATGTG 60.249 55.000 0.00 0.00 0.00 3.21
350 351 0.676184 ATGGTCGCTCGCTATGATGT 59.324 50.000 0.00 0.00 0.00 3.06
351 352 1.458445 CAATGGTCGCTCGCTATGATG 59.542 52.381 0.00 0.00 0.00 3.07
352 353 1.069204 ACAATGGTCGCTCGCTATGAT 59.931 47.619 0.00 0.00 0.00 2.45
353 354 0.459899 ACAATGGTCGCTCGCTATGA 59.540 50.000 0.00 0.00 0.00 2.15
354 355 0.855349 GACAATGGTCGCTCGCTATG 59.145 55.000 0.00 0.00 33.68 2.23
355 356 3.274393 GACAATGGTCGCTCGCTAT 57.726 52.632 0.00 0.00 33.68 2.97
356 357 4.806571 GACAATGGTCGCTCGCTA 57.193 55.556 0.00 0.00 33.68 4.26
364 365 0.454600 TAGGCGACGAGACAATGGTC 59.545 55.000 0.00 0.00 44.66 4.02
365 366 0.172803 GTAGGCGACGAGACAATGGT 59.827 55.000 0.00 0.00 0.00 3.55
366 367 0.527817 GGTAGGCGACGAGACAATGG 60.528 60.000 0.00 0.00 0.00 3.16
367 368 0.527817 GGGTAGGCGACGAGACAATG 60.528 60.000 0.00 0.00 0.00 2.82
368 369 0.968901 TGGGTAGGCGACGAGACAAT 60.969 55.000 0.00 0.00 0.00 2.71
369 370 0.968901 ATGGGTAGGCGACGAGACAA 60.969 55.000 0.00 0.00 0.00 3.18
370 371 1.379443 ATGGGTAGGCGACGAGACA 60.379 57.895 0.00 0.00 0.00 3.41
371 372 1.359475 GATGGGTAGGCGACGAGAC 59.641 63.158 0.00 0.00 0.00 3.36
372 373 2.184830 CGATGGGTAGGCGACGAGA 61.185 63.158 0.00 0.00 0.00 4.04
373 374 2.331805 CGATGGGTAGGCGACGAG 59.668 66.667 0.00 0.00 0.00 4.18
374 375 3.896133 GCGATGGGTAGGCGACGA 61.896 66.667 0.00 0.00 0.00 4.20
375 376 4.201679 TGCGATGGGTAGGCGACG 62.202 66.667 0.00 0.00 0.00 5.12
376 377 2.279517 CTGCGATGGGTAGGCGAC 60.280 66.667 0.00 0.00 0.00 5.19
377 378 2.758327 ACTGCGATGGGTAGGCGA 60.758 61.111 0.00 0.00 31.84 5.54
378 379 2.279517 GACTGCGATGGGTAGGCG 60.280 66.667 0.00 0.00 31.84 5.52
379 380 2.279517 CGACTGCGATGGGTAGGC 60.280 66.667 0.00 0.00 40.82 3.93
380 381 2.279517 GCGACTGCGATGGGTAGG 60.280 66.667 0.00 0.00 40.82 3.18
407 408 3.925630 ATTGCAGTGAGGGTGGCGG 62.926 63.158 0.00 0.00 0.00 6.13
408 409 2.360350 ATTGCAGTGAGGGTGGCG 60.360 61.111 0.00 0.00 0.00 5.69
409 410 0.682209 ATCATTGCAGTGAGGGTGGC 60.682 55.000 17.42 0.00 0.00 5.01
410 411 1.340308 TGATCATTGCAGTGAGGGTGG 60.340 52.381 17.42 0.00 0.00 4.61
411 412 2.118313 TGATCATTGCAGTGAGGGTG 57.882 50.000 17.42 0.00 0.00 4.61
412 413 2.885135 TTGATCATTGCAGTGAGGGT 57.115 45.000 17.42 0.57 0.00 4.34
413 414 2.361119 CCATTGATCATTGCAGTGAGGG 59.639 50.000 17.42 9.49 0.00 4.30
414 415 3.021695 ACCATTGATCATTGCAGTGAGG 58.978 45.455 17.42 14.13 0.00 3.86
415 416 3.181490 CCACCATTGATCATTGCAGTGAG 60.181 47.826 17.42 5.32 0.00 3.51
416 417 2.756207 CCACCATTGATCATTGCAGTGA 59.244 45.455 14.80 14.80 0.00 3.41
417 418 2.737359 GCCACCATTGATCATTGCAGTG 60.737 50.000 11.35 13.39 0.00 3.66
418 419 1.479323 GCCACCATTGATCATTGCAGT 59.521 47.619 11.35 3.52 0.00 4.40
419 420 1.754803 AGCCACCATTGATCATTGCAG 59.245 47.619 11.35 6.37 0.00 4.41
420 421 1.478916 CAGCCACCATTGATCATTGCA 59.521 47.619 11.35 0.00 0.00 4.08
421 422 1.479323 ACAGCCACCATTGATCATTGC 59.521 47.619 11.35 1.63 0.00 3.56
422 423 3.021695 AGACAGCCACCATTGATCATTG 58.978 45.455 10.09 10.09 0.00 2.82
423 424 3.377253 AGACAGCCACCATTGATCATT 57.623 42.857 0.00 0.00 0.00 2.57
424 425 3.285484 GAAGACAGCCACCATTGATCAT 58.715 45.455 0.00 0.00 0.00 2.45
425 426 2.715046 GAAGACAGCCACCATTGATCA 58.285 47.619 0.00 0.00 0.00 2.92
426 427 1.667724 CGAAGACAGCCACCATTGATC 59.332 52.381 0.00 0.00 0.00 2.92
427 428 1.003580 ACGAAGACAGCCACCATTGAT 59.996 47.619 0.00 0.00 0.00 2.57
428 429 0.396435 ACGAAGACAGCCACCATTGA 59.604 50.000 0.00 0.00 0.00 2.57
429 430 0.798776 GACGAAGACAGCCACCATTG 59.201 55.000 0.00 0.00 0.00 2.82
430 431 0.396435 TGACGAAGACAGCCACCATT 59.604 50.000 0.00 0.00 0.00 3.16
431 432 0.396435 TTGACGAAGACAGCCACCAT 59.604 50.000 0.00 0.00 31.90 3.55
432 433 0.531974 GTTGACGAAGACAGCCACCA 60.532 55.000 0.00 0.00 31.90 4.17
433 434 2.235546 GTTGACGAAGACAGCCACC 58.764 57.895 0.00 0.00 31.90 4.61
437 438 0.861837 CAGTGGTTGACGAAGACAGC 59.138 55.000 0.00 0.00 31.90 4.40
438 439 2.225068 ACAGTGGTTGACGAAGACAG 57.775 50.000 0.00 0.00 31.90 3.51
439 440 2.684001 AACAGTGGTTGACGAAGACA 57.316 45.000 0.00 0.00 35.46 3.41
440 441 3.195661 AGAAACAGTGGTTGACGAAGAC 58.804 45.455 0.00 0.00 37.30 3.01
441 442 3.536956 AGAAACAGTGGTTGACGAAGA 57.463 42.857 0.00 0.00 37.30 2.87
442 443 4.616181 AAAGAAACAGTGGTTGACGAAG 57.384 40.909 0.00 0.00 37.30 3.79
443 444 5.180271 AGTAAAGAAACAGTGGTTGACGAA 58.820 37.500 0.00 0.00 37.30 3.85
444 445 4.761975 AGTAAAGAAACAGTGGTTGACGA 58.238 39.130 0.00 0.00 37.30 4.20
445 446 6.592798 TTAGTAAAGAAACAGTGGTTGACG 57.407 37.500 0.00 0.00 37.30 4.35
446 447 8.403236 ACATTTAGTAAAGAAACAGTGGTTGAC 58.597 33.333 0.00 0.00 37.30 3.18
447 448 8.514330 ACATTTAGTAAAGAAACAGTGGTTGA 57.486 30.769 0.00 0.00 37.30 3.18
467 468 9.719355 TCTGTTGTATGTAGTGACAATACATTT 57.281 29.630 27.79 12.75 40.16 2.32
468 469 9.151471 GTCTGTTGTATGTAGTGACAATACATT 57.849 33.333 27.79 15.22 40.16 2.71
469 470 7.488150 CGTCTGTTGTATGTAGTGACAATACAT 59.512 37.037 26.37 26.37 44.15 2.29
470 471 6.804783 CGTCTGTTGTATGTAGTGACAATACA 59.195 38.462 17.24 17.24 39.59 2.29
471 472 6.805271 ACGTCTGTTGTATGTAGTGACAATAC 59.195 38.462 6.11 6.11 39.59 1.89
472 473 6.804783 CACGTCTGTTGTATGTAGTGACAATA 59.195 38.462 0.00 0.00 39.59 1.90
473 474 5.633601 CACGTCTGTTGTATGTAGTGACAAT 59.366 40.000 0.00 0.00 39.59 2.71
474 475 4.979815 CACGTCTGTTGTATGTAGTGACAA 59.020 41.667 0.00 0.00 39.59 3.18
475 476 4.037089 ACACGTCTGTTGTATGTAGTGACA 59.963 41.667 0.00 0.00 40.72 3.58
476 477 4.381863 CACACGTCTGTTGTATGTAGTGAC 59.618 45.833 0.00 0.00 33.18 3.67
477 478 4.037089 ACACACGTCTGTTGTATGTAGTGA 59.963 41.667 0.00 0.00 33.18 3.41
478 479 4.148174 CACACACGTCTGTTGTATGTAGTG 59.852 45.833 0.00 0.00 34.85 2.74
479 480 4.295870 CACACACGTCTGTTGTATGTAGT 58.704 43.478 0.00 0.00 0.00 2.73
480 481 3.673338 CCACACACGTCTGTTGTATGTAG 59.327 47.826 0.00 0.00 0.00 2.74
481 482 3.644823 CCACACACGTCTGTTGTATGTA 58.355 45.455 0.00 0.00 0.00 2.29
482 483 2.479837 CCACACACGTCTGTTGTATGT 58.520 47.619 0.00 0.00 0.00 2.29
483 484 1.194547 GCCACACACGTCTGTTGTATG 59.805 52.381 0.00 0.00 0.00 2.39
484 485 1.508632 GCCACACACGTCTGTTGTAT 58.491 50.000 0.00 0.00 0.00 2.29
485 486 0.531090 GGCCACACACGTCTGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
486 487 1.817941 GGCCACACACGTCTGTTGT 60.818 57.895 0.00 0.00 0.00 3.32
487 488 1.372838 TTGGCCACACACGTCTGTTG 61.373 55.000 3.88 0.00 0.00 3.33
488 489 0.465460 ATTGGCCACACACGTCTGTT 60.465 50.000 3.88 0.00 0.00 3.16
489 490 0.394938 TATTGGCCACACACGTCTGT 59.605 50.000 3.88 0.00 0.00 3.41
490 491 1.078709 CTATTGGCCACACACGTCTG 58.921 55.000 3.88 0.00 0.00 3.51
491 492 0.973632 TCTATTGGCCACACACGTCT 59.026 50.000 3.88 0.00 0.00 4.18
492 493 1.665679 CATCTATTGGCCACACACGTC 59.334 52.381 3.88 0.00 0.00 4.34
493 494 1.678728 CCATCTATTGGCCACACACGT 60.679 52.381 3.88 0.00 39.09 4.49
494 495 1.016627 CCATCTATTGGCCACACACG 58.983 55.000 3.88 0.00 39.09 4.49
495 496 2.017049 GTCCATCTATTGGCCACACAC 58.983 52.381 3.88 0.00 46.01 3.82
496 497 1.632920 TGTCCATCTATTGGCCACACA 59.367 47.619 3.88 0.00 46.01 3.72
497 498 2.418368 TGTCCATCTATTGGCCACAC 57.582 50.000 3.88 0.00 46.01 3.82
500 501 2.357050 CCAAGTGTCCATCTATTGGCCA 60.357 50.000 0.00 0.00 46.01 5.36
501 502 2.092429 TCCAAGTGTCCATCTATTGGCC 60.092 50.000 0.00 0.00 46.01 5.36
502 503 2.945668 GTCCAAGTGTCCATCTATTGGC 59.054 50.000 0.00 0.00 46.01 4.52
504 505 6.764308 AAATGTCCAAGTGTCCATCTATTG 57.236 37.500 0.00 0.00 0.00 1.90
505 506 7.781324 AAAAATGTCCAAGTGTCCATCTATT 57.219 32.000 0.00 0.00 0.00 1.73
534 535 2.901042 CCTCGGCAAGGGTAGACC 59.099 66.667 0.00 0.00 42.03 3.85
541 542 7.751450 TGTTAGAAACACTACCTCGGCAAGG 62.751 48.000 2.94 2.94 43.25 3.61
542 543 2.457366 AGAAACACTACCTCGGCAAG 57.543 50.000 0.00 0.00 0.00 4.01
543 544 3.069872 TGTTAGAAACACTACCTCGGCAA 59.930 43.478 0.00 0.00 36.25 4.52
544 545 2.629137 TGTTAGAAACACTACCTCGGCA 59.371 45.455 0.00 0.00 36.25 5.69
545 546 3.308438 TGTTAGAAACACTACCTCGGC 57.692 47.619 0.00 0.00 36.25 5.54
546 547 6.796705 ATTTTGTTAGAAACACTACCTCGG 57.203 37.500 0.00 0.00 41.97 4.63
547 548 9.755064 CATAATTTTGTTAGAAACACTACCTCG 57.245 33.333 0.00 0.00 41.97 4.63
600 601 5.506686 TGTTTGTCGTTCATCCAATCAAA 57.493 34.783 0.00 0.00 0.00 2.69
601 602 5.703978 ATGTTTGTCGTTCATCCAATCAA 57.296 34.783 0.00 0.00 0.00 2.57
660 661 7.309744 CCAAAGTAAAATGTTATCCCTGCTCAA 60.310 37.037 0.00 0.00 0.00 3.02
666 667 6.800890 ACTCCCAAAGTAAAATGTTATCCCT 58.199 36.000 0.00 0.00 36.07 4.20
667 668 8.584063 TTACTCCCAAAGTAAAATGTTATCCC 57.416 34.615 0.00 0.00 45.38 3.85
707 708 4.623932 ATGTTTCTGCTACAGTCCTTCA 57.376 40.909 0.00 0.00 32.61 3.02
709 710 8.409358 AAAATTATGTTTCTGCTACAGTCCTT 57.591 30.769 0.00 0.00 32.61 3.36
721 722 6.673839 TTTCCCGGGAAAAATTATGTTTCT 57.326 33.333 40.27 0.00 40.63 2.52
749 750 7.281100 TGGCATTTTCCGTTTAAAAAGTTTCAT 59.719 29.630 0.00 0.00 32.42 2.57
750 751 6.594159 TGGCATTTTCCGTTTAAAAAGTTTCA 59.406 30.769 0.00 0.00 32.42 2.69
751 752 7.006187 TGGCATTTTCCGTTTAAAAAGTTTC 57.994 32.000 0.00 0.00 32.42 2.78
754 755 5.908341 TCTGGCATTTTCCGTTTAAAAAGT 58.092 33.333 0.00 0.00 32.42 2.66
800 802 8.148807 TCATCTCATTTCGTTTTGTTACTCAA 57.851 30.769 0.00 0.00 0.00 3.02
801 803 7.722795 TCATCTCATTTCGTTTTGTTACTCA 57.277 32.000 0.00 0.00 0.00 3.41
802 804 9.690434 GTATCATCTCATTTCGTTTTGTTACTC 57.310 33.333 0.00 0.00 0.00 2.59
803 805 9.214957 TGTATCATCTCATTTCGTTTTGTTACT 57.785 29.630 0.00 0.00 0.00 2.24
804 806 9.262472 GTGTATCATCTCATTTCGTTTTGTTAC 57.738 33.333 0.00 0.00 0.00 2.50
805 807 8.994170 TGTGTATCATCTCATTTCGTTTTGTTA 58.006 29.630 0.00 0.00 0.00 2.41
806 808 7.870826 TGTGTATCATCTCATTTCGTTTTGTT 58.129 30.769 0.00 0.00 0.00 2.83
807 809 7.173218 ACTGTGTATCATCTCATTTCGTTTTGT 59.827 33.333 0.00 0.00 0.00 2.83
808 810 7.521529 ACTGTGTATCATCTCATTTCGTTTTG 58.478 34.615 0.00 0.00 0.00 2.44
809 811 7.672983 ACTGTGTATCATCTCATTTCGTTTT 57.327 32.000 0.00 0.00 0.00 2.43
810 812 7.817478 TGTACTGTGTATCATCTCATTTCGTTT 59.183 33.333 0.00 0.00 0.00 3.60
811 813 7.320399 TGTACTGTGTATCATCTCATTTCGTT 58.680 34.615 0.00 0.00 0.00 3.85
812 814 6.863275 TGTACTGTGTATCATCTCATTTCGT 58.137 36.000 0.00 0.00 0.00 3.85
813 815 7.515841 GCTTGTACTGTGTATCATCTCATTTCG 60.516 40.741 0.00 0.00 0.00 3.46
814 816 7.254590 GGCTTGTACTGTGTATCATCTCATTTC 60.255 40.741 0.00 0.00 0.00 2.17
815 817 6.540189 GGCTTGTACTGTGTATCATCTCATTT 59.460 38.462 0.00 0.00 0.00 2.32
816 818 6.051717 GGCTTGTACTGTGTATCATCTCATT 58.948 40.000 0.00 0.00 0.00 2.57
817 819 5.453903 GGGCTTGTACTGTGTATCATCTCAT 60.454 44.000 0.00 0.00 0.00 2.90
818 820 4.141937 GGGCTTGTACTGTGTATCATCTCA 60.142 45.833 0.00 0.00 0.00 3.27
819 821 4.141937 TGGGCTTGTACTGTGTATCATCTC 60.142 45.833 0.00 0.00 0.00 2.75
820 822 3.774766 TGGGCTTGTACTGTGTATCATCT 59.225 43.478 0.00 0.00 0.00 2.90
821 823 4.122776 CTGGGCTTGTACTGTGTATCATC 58.877 47.826 0.00 0.00 0.00 2.92
822 824 3.774766 TCTGGGCTTGTACTGTGTATCAT 59.225 43.478 0.00 0.00 0.00 2.45
823 825 3.169908 TCTGGGCTTGTACTGTGTATCA 58.830 45.455 0.00 0.00 0.00 2.15
824 826 3.887621 TCTGGGCTTGTACTGTGTATC 57.112 47.619 0.00 0.00 0.00 2.24
825 827 3.619979 GCTTCTGGGCTTGTACTGTGTAT 60.620 47.826 0.00 0.00 0.00 2.29
826 828 2.289444 GCTTCTGGGCTTGTACTGTGTA 60.289 50.000 0.00 0.00 0.00 2.90
827 829 1.543429 GCTTCTGGGCTTGTACTGTGT 60.543 52.381 0.00 0.00 0.00 3.72
828 830 1.160137 GCTTCTGGGCTTGTACTGTG 58.840 55.000 0.00 0.00 0.00 3.66
829 831 0.320771 CGCTTCTGGGCTTGTACTGT 60.321 55.000 0.00 0.00 0.00 3.55
880 882 1.410153 GGGTAAAGGGCTCGTTCGATA 59.590 52.381 0.00 0.00 0.00 2.92
910 912 4.219033 GTCTTGTGTTATCGCTTTTGGTG 58.781 43.478 0.00 0.00 0.00 4.17
911 913 3.059188 CGTCTTGTGTTATCGCTTTTGGT 60.059 43.478 0.00 0.00 0.00 3.67
912 914 3.185594 TCGTCTTGTGTTATCGCTTTTGG 59.814 43.478 0.00 0.00 0.00 3.28
923 925 2.660258 AAGCGGGCTCGTCTTGTGTT 62.660 55.000 8.30 0.00 38.89 3.32
926 928 2.357517 CAAGCGGGCTCGTCTTGT 60.358 61.111 25.37 2.73 41.22 3.16
927 929 2.048222 TCAAGCGGGCTCGTCTTG 60.048 61.111 26.83 26.83 44.15 3.02
928 930 2.262915 CTCAAGCGGGCTCGTCTT 59.737 61.111 8.30 8.99 38.89 3.01
1088 1090 1.077357 ACCTGAGACGGAGATCGCT 60.077 57.895 0.00 0.00 43.89 4.93
1149 1151 4.032445 GTCAGATTAAACGCGCATGAGTAA 59.968 41.667 5.73 0.00 0.00 2.24
1187 1189 2.537560 CGCATCGATTGTGGCCTCC 61.538 63.158 3.32 0.00 31.94 4.30
1191 1193 1.571460 GGATCGCATCGATTGTGGC 59.429 57.895 0.00 0.00 47.00 5.01
1249 1251 0.309612 AGAAATCGGCGCAAACGTTT 59.690 45.000 10.83 7.96 42.83 3.60
1252 1254 1.511887 CCAGAAATCGGCGCAAACG 60.512 57.895 10.83 3.44 44.07 3.60
1253 1255 0.451783 ATCCAGAAATCGGCGCAAAC 59.548 50.000 10.83 0.00 0.00 2.93
1291 1293 3.433615 GCTACGAAAACACAAGATCTGCT 59.566 43.478 0.00 0.00 0.00 4.24
1380 1382 5.418524 TGGCTGCACAGTAAACATGATTTAT 59.581 36.000 0.00 0.00 0.00 1.40
1381 1383 4.764308 TGGCTGCACAGTAAACATGATTTA 59.236 37.500 0.00 0.00 0.00 1.40
1437 1441 0.477204 TCCTCGGGATACTCCACGAT 59.523 55.000 0.00 0.00 38.12 3.73
1720 1724 3.190738 TTCTGTTGCCCCTCACCCG 62.191 63.158 0.00 0.00 0.00 5.28
1721 1725 1.303643 CTTCTGTTGCCCCTCACCC 60.304 63.158 0.00 0.00 0.00 4.61
1722 1726 1.303643 CCTTCTGTTGCCCCTCACC 60.304 63.158 0.00 0.00 0.00 4.02
1723 1727 0.329596 ATCCTTCTGTTGCCCCTCAC 59.670 55.000 0.00 0.00 0.00 3.51
1724 1728 1.004745 GAATCCTTCTGTTGCCCCTCA 59.995 52.381 0.00 0.00 0.00 3.86
1754 1758 2.868044 GCAGAACCGGAGCATACCATAG 60.868 54.545 9.46 0.00 0.00 2.23
1939 1944 1.618343 GGGTCAATTGGTGAAACTGGG 59.382 52.381 5.42 0.00 38.23 4.45
1945 1950 0.474614 TGACCGGGTCAATTGGTGAA 59.525 50.000 26.95 0.35 39.78 3.18
1990 1995 1.078848 AGTTGCTGAGCCGATGTCC 60.079 57.895 0.23 0.00 0.00 4.02
2011 2016 2.414481 CACCTTCGACTTGAATCTGCTG 59.586 50.000 0.00 0.00 35.63 4.41
2191 2196 5.977129 CGAAGGCTCAAACAAAAACTTATGT 59.023 36.000 0.00 0.00 0.00 2.29
2340 2345 2.734755 TTGAATGGGCTGGACTATGG 57.265 50.000 0.00 0.00 0.00 2.74
2343 2348 2.025037 AGCATTTGAATGGGCTGGACTA 60.025 45.455 5.91 0.00 36.90 2.59
2363 2368 4.584518 TGGTGGGTGTGCTGGCAG 62.585 66.667 10.94 10.94 0.00 4.85
2447 2455 3.263503 GACAAAACTTCCCGGCGCC 62.264 63.158 19.07 19.07 0.00 6.53
3428 3436 0.878523 TCTTCTTGCAACACCGTCCG 60.879 55.000 0.00 0.00 0.00 4.79
3618 3626 5.405873 CGTATGTCAGATAAGTAGCTCTCGA 59.594 44.000 0.00 0.00 0.00 4.04
3713 3727 5.114764 TCATTATCCACATCCAAAGCTGA 57.885 39.130 0.00 0.00 0.00 4.26
3726 3740 9.092338 CCCAATCTTCCAATAAATCATTATCCA 57.908 33.333 0.00 0.00 31.28 3.41
3775 3801 8.462811 TCAAGTTCTGTAGATATCTGACAACTC 58.537 37.037 15.79 8.15 0.00 3.01
3811 3837 3.090037 TCTTGGAACTAGACCCTCTTCG 58.910 50.000 0.00 0.00 0.00 3.79
3970 3996 3.435327 TGCTGTAGTGCTTTGGAATTACG 59.565 43.478 0.00 0.00 0.00 3.18
4064 4091 3.696548 TGATAGTAGAGTGGAGCAGTGTG 59.303 47.826 0.00 0.00 0.00 3.82
4079 4106 5.061721 TCACTGCCAGGTCTATGATAGTA 57.938 43.478 0.00 0.00 0.00 1.82
4149 4176 7.870509 TTGATGATTCCCAGACAGAAAATAG 57.129 36.000 0.00 0.00 0.00 1.73
4160 4187 5.628130 AGTACCATGATTGATGATTCCCAG 58.372 41.667 0.00 0.00 33.31 4.45
4283 4311 2.094130 AGACTGGCTTACGGTAGCTTTC 60.094 50.000 10.30 5.41 39.29 2.62
4403 4431 8.598075 GTTCGGTATAGACAACGAAACATAAAT 58.402 33.333 3.67 0.00 45.36 1.40
4418 4446 3.247442 CAAAGTGCGTGTTCGGTATAGA 58.753 45.455 0.00 0.00 37.56 1.98
4428 4456 3.181473 TGGTTCTAGTACAAAGTGCGTGT 60.181 43.478 1.69 0.00 0.00 4.49
4448 4476 7.578310 AAGATACAATGATGAATGGAGTTGG 57.422 36.000 0.00 0.00 0.00 3.77
4538 4566 0.670706 TATGAGCTAGCACCAGAGCG 59.329 55.000 18.83 0.00 43.72 5.03
4629 4657 2.863739 TCATCGTTCAGAACTGTAGCG 58.136 47.619 11.60 0.00 0.00 4.26
4691 4719 1.301423 CCGGTCTTTGGTCGAAAACA 58.699 50.000 0.00 0.00 0.00 2.83
4721 4749 0.745486 CAAGCTGGTCATCATCGGCA 60.745 55.000 0.00 0.00 37.71 5.69
4761 4792 1.988107 TCTCCACAGGAAAGGAAGCAT 59.012 47.619 0.00 0.00 32.57 3.79
4806 4837 1.335810 GGCACGGAGTCGATATGTACA 59.664 52.381 0.00 0.00 41.61 2.90
4868 4899 1.179814 AGAAACTCGCGACTCCACCT 61.180 55.000 3.71 0.00 0.00 4.00
4877 4908 2.563976 CAACACATTCAGAAACTCGCG 58.436 47.619 0.00 0.00 0.00 5.87
4879 4910 2.220824 TCGCAACACATTCAGAAACTCG 59.779 45.455 0.00 0.00 0.00 4.18
4895 4926 5.129634 ACATCAATACACCCATATTCGCAA 58.870 37.500 0.00 0.00 0.00 4.85
4898 4929 5.106948 GCTGACATCAATACACCCATATTCG 60.107 44.000 0.00 0.00 0.00 3.34
4931 4962 6.929606 TCTGCTCTCATGACAATATTGATGAG 59.070 38.462 26.57 26.57 39.23 2.90
4936 4967 5.558463 CGCTTCTGCTCTCATGACAATATTG 60.558 44.000 14.01 14.01 36.97 1.90
4937 4968 4.510711 CGCTTCTGCTCTCATGACAATATT 59.489 41.667 0.00 0.00 36.97 1.28
4938 4969 4.056740 CGCTTCTGCTCTCATGACAATAT 58.943 43.478 0.00 0.00 36.97 1.28
4939 4970 3.131046 TCGCTTCTGCTCTCATGACAATA 59.869 43.478 0.00 0.00 36.97 1.90
4941 4972 1.273327 TCGCTTCTGCTCTCATGACAA 59.727 47.619 0.00 0.00 36.97 3.18
4942 4973 0.890683 TCGCTTCTGCTCTCATGACA 59.109 50.000 0.00 0.00 36.97 3.58
4943 4974 1.135141 ACTCGCTTCTGCTCTCATGAC 60.135 52.381 0.00 0.00 36.97 3.06
4944 4975 1.180907 ACTCGCTTCTGCTCTCATGA 58.819 50.000 0.00 0.00 36.97 3.07
4945 4976 1.925847 GAACTCGCTTCTGCTCTCATG 59.074 52.381 0.00 0.00 36.97 3.07
4946 4977 1.134848 GGAACTCGCTTCTGCTCTCAT 60.135 52.381 0.00 0.00 36.97 2.90
4949 4980 0.246086 CAGGAACTCGCTTCTGCTCT 59.754 55.000 0.00 0.00 34.60 4.09
4965 4996 3.653009 CACACACAGGCACGCAGG 61.653 66.667 0.00 0.00 0.00 4.85
4973 5004 0.904649 TGATAGGCTCCACACACAGG 59.095 55.000 0.00 0.00 0.00 4.00
4983 5014 8.107095 TGGGTATTATTAACCATTGATAGGCTC 58.893 37.037 0.00 0.00 40.40 4.70
4997 5028 4.972568 TCAGACTGGGCTGGGTATTATTAA 59.027 41.667 1.81 0.00 36.55 1.40
5006 5037 0.622665 AATTCTCAGACTGGGCTGGG 59.377 55.000 1.81 0.00 37.73 4.45
5026 5058 1.120530 TCGGGAACTAGATGGGCTTC 58.879 55.000 0.00 0.00 0.00 3.86
5057 5119 2.845363 TGTCCTTTCCGAAACCTACC 57.155 50.000 0.00 0.00 0.00 3.18
5070 5132 0.338814 AGTAGGGGTCGGATGTCCTT 59.661 55.000 0.00 0.00 0.00 3.36
5093 5155 0.035152 CTACCTGCCCATTGCTGTGA 60.035 55.000 0.00 0.00 42.00 3.58
5094 5156 1.660560 GCTACCTGCCCATTGCTGTG 61.661 60.000 0.00 0.00 42.00 3.66
5097 5159 1.077212 CTGCTACCTGCCCATTGCT 60.077 57.895 0.00 0.00 42.00 3.91
5111 5173 1.676006 GTGTATTTTATGCCCGCTGCT 59.324 47.619 0.00 0.00 42.00 4.24
5165 5227 5.587043 CCTACCTGCGGTTTTTCAATGTATA 59.413 40.000 5.57 0.00 37.09 1.47
5166 5228 4.398044 CCTACCTGCGGTTTTTCAATGTAT 59.602 41.667 5.57 0.00 37.09 2.29
5167 5229 3.754323 CCTACCTGCGGTTTTTCAATGTA 59.246 43.478 5.57 0.00 37.09 2.29
5168 5230 2.556622 CCTACCTGCGGTTTTTCAATGT 59.443 45.455 5.57 0.00 37.09 2.71
5212 5274 2.811799 GCGTGGTGCACCCTTTTT 59.188 55.556 32.62 0.00 45.45 1.94
5247 5309 3.689649 GGCACGAGTTCATAATTCCTTGT 59.310 43.478 0.00 0.00 0.00 3.16
5338 5400 2.125912 CCCGGCGTTGAGTCTCAG 60.126 66.667 6.01 0.00 0.00 3.35
5351 5413 4.856801 CCTCCGAACCATGCCCGG 62.857 72.222 11.01 11.01 44.22 5.73
5369 5431 2.341543 CTCGGATCGCCTCCATGG 59.658 66.667 4.97 4.97 45.24 3.66
5376 5438 1.950758 GAGTCTACCTCGGATCGCC 59.049 63.158 0.00 0.00 0.00 5.54
5411 5473 0.248012 AACACGCGATACCATGGACA 59.752 50.000 21.47 5.94 0.00 4.02
5425 5487 2.955614 ACTGTAATCCCGAGAAACACG 58.044 47.619 0.00 0.00 0.00 4.49
5441 5503 0.616111 CCTCTGCAGGGAGGTACTGT 60.616 60.000 17.43 0.00 45.65 3.55
5665 5727 1.611043 GCGTGCAGCTTCTTGAAATC 58.389 50.000 0.00 0.00 44.04 2.17
5678 5740 1.841302 AAGGATCTTGGAGGCGTGCA 61.841 55.000 0.00 0.00 0.00 4.57
5702 5764 2.645802 GAACACTTTGGTGGTGGTGTA 58.354 47.619 0.00 0.00 44.30 2.90
5775 5837 6.863275 TCGCTGTTCTATCTTGTTCTTGATA 58.137 36.000 0.00 0.00 0.00 2.15
5850 5912 6.381498 TCAACAACTATCACCTCCCAATTA 57.619 37.500 0.00 0.00 0.00 1.40
5995 6057 8.356657 TCACTAATCCAAAATGAACAAACGAAT 58.643 29.630 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.