Multiple sequence alignment - TraesCS2B01G499400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G499400 chr2B 100.000 4835 0 0 4717 9551 695511860 695516694 0.000000e+00 8929.0
1 TraesCS2B01G499400 chr2B 100.000 2769 0 0 1 2769 695507144 695509912 0.000000e+00 5114.0
2 TraesCS2B01G499400 chr2B 100.000 1240 0 0 3182 4421 695510325 695511564 0.000000e+00 2290.0
3 TraesCS2B01G499400 chr2B 83.588 1377 183 27 1022 2377 695439892 695438538 0.000000e+00 1251.0
4 TraesCS2B01G499400 chr2B 81.420 1394 199 29 996 2377 695106859 695108204 0.000000e+00 1085.0
5 TraesCS2B01G499400 chr2B 82.238 1278 190 26 1026 2286 695172093 695170836 0.000000e+00 1068.0
6 TraesCS2B01G499400 chr2B 81.835 1057 129 36 7542 8571 695437538 695436518 0.000000e+00 830.0
7 TraesCS2B01G499400 chr2B 83.924 846 116 11 1022 1857 695414310 695413475 0.000000e+00 791.0
8 TraesCS2B01G499400 chr2B 96.491 399 14 0 3182 3580 47152247 47151849 0.000000e+00 660.0
9 TraesCS2B01G499400 chr2B 97.253 364 9 1 3217 3580 47152348 47152710 4.900000e-172 616.0
10 TraesCS2B01G499400 chr2B 79.396 563 90 13 3883 4421 139847628 139848188 3.260000e-99 374.0
11 TraesCS2B01G499400 chr2B 78.597 556 82 21 3883 4409 506053266 506053813 5.530000e-87 333.0
12 TraesCS2B01G499400 chr2B 95.625 160 7 0 3416 3575 695509681 695509522 3.420000e-64 257.0
13 TraesCS2B01G499400 chr2B 92.727 110 5 1 8453 8562 695409914 695409808 1.280000e-33 156.0
14 TraesCS2B01G499400 chr2B 89.286 112 4 1 3184 3287 47152347 47152236 4.650000e-28 137.0
15 TraesCS2B01G499400 chr2B 90.769 65 5 1 7018 7081 695514252 695514316 1.710000e-12 86.1
16 TraesCS2B01G499400 chr2D 94.169 1595 58 9 7077 8659 578324327 578325898 0.000000e+00 2398.0
17 TraesCS2B01G499400 chr2D 94.409 1413 63 8 970 2381 578307405 578308802 0.000000e+00 2158.0
18 TraesCS2B01G499400 chr2D 85.962 1674 171 27 720 2377 578040550 578042175 0.000000e+00 1731.0
19 TraesCS2B01G499400 chr2D 91.042 1094 67 14 4718 5792 578322080 578323161 0.000000e+00 1448.0
20 TraesCS2B01G499400 chr2D 84.857 1400 172 22 995 2377 577829635 577828259 0.000000e+00 1375.0
21 TraesCS2B01G499400 chr2D 90.891 1010 65 8 6054 7036 578323310 578324319 0.000000e+00 1330.0
22 TraesCS2B01G499400 chr2D 82.734 1390 180 33 996 2377 577581911 577580574 0.000000e+00 1182.0
23 TraesCS2B01G499400 chr2D 95.327 749 28 3 1635 2381 578320432 578321175 0.000000e+00 1182.0
24 TraesCS2B01G499400 chr2D 91.319 864 49 12 3572 4413 578321160 578322019 0.000000e+00 1157.0
25 TraesCS2B01G499400 chr2D 82.822 1304 184 21 993 2283 577536217 577537493 0.000000e+00 1131.0
26 TraesCS2B01G499400 chr2D 81.846 1300 190 26 996 2277 577802846 577801575 0.000000e+00 1051.0
27 TraesCS2B01G499400 chr2D 94.776 670 32 1 970 1639 578312689 578313355 0.000000e+00 1040.0
28 TraesCS2B01G499400 chr2D 81.655 1172 174 24 1193 2357 577440847 577441984 0.000000e+00 935.0
29 TraesCS2B01G499400 chr2D 83.590 908 102 15 6174 7036 380417607 380416702 0.000000e+00 808.0
30 TraesCS2B01G499400 chr2D 82.051 702 81 26 3572 4233 578308787 578309483 3.010000e-154 556.0
31 TraesCS2B01G499400 chr2D 81.763 658 83 18 7238 7865 578043625 578044275 5.110000e-142 516.0
32 TraesCS2B01G499400 chr2D 78.554 802 103 38 7881 8641 577579989 577579216 1.880000e-126 464.0
33 TraesCS2B01G499400 chr2D 84.225 355 48 6 8135 8486 577827648 577827299 1.190000e-88 339.0
34 TraesCS2B01G499400 chr2D 88.053 226 19 6 8568 8793 578325889 578326106 2.650000e-65 261.0
35 TraesCS2B01G499400 chr2D 84.746 236 35 1 3340 3575 620991382 620991616 1.600000e-57 235.0
36 TraesCS2B01G499400 chr2D 86.702 188 22 3 3389 3575 622910067 622910252 1.260000e-48 206.0
37 TraesCS2B01G499400 chr2D 91.597 119 7 2 8453 8571 577827299 577827184 2.760000e-35 161.0
38 TraesCS2B01G499400 chr2D 93.137 102 7 0 7305 7406 578310471 578310572 5.980000e-32 150.0
39 TraesCS2B01G499400 chr2D 93.878 49 3 0 8636 8684 578326003 578326051 3.700000e-09 75.0
40 TraesCS2B01G499400 chr2A 96.974 1388 27 6 995 2381 716163646 716165019 0.000000e+00 2316.0
41 TraesCS2B01G499400 chr2A 83.389 2390 309 49 4717 7036 450066864 450064493 0.000000e+00 2134.0
42 TraesCS2B01G499400 chr2A 82.992 2393 312 47 4717 7036 609161380 609159010 0.000000e+00 2076.0
43 TraesCS2B01G499400 chr2A 91.655 1414 77 16 7539 8934 716168839 716170229 0.000000e+00 1919.0
44 TraesCS2B01G499400 chr2A 91.196 1329 77 19 4717 6024 716165935 716167244 0.000000e+00 1770.0
45 TraesCS2B01G499400 chr2A 84.199 1405 184 28 988 2377 715967213 715965832 0.000000e+00 1330.0
46 TraesCS2B01G499400 chr2A 90.348 1005 69 5 6054 7036 716167244 716168242 0.000000e+00 1293.0
47 TraesCS2B01G499400 chr2A 85.554 1156 138 12 5909 7036 569200344 569199190 0.000000e+00 1182.0
48 TraesCS2B01G499400 chr2A 90.816 882 47 16 3572 4421 716165004 716165883 0.000000e+00 1149.0
49 TraesCS2B01G499400 chr2A 81.558 1399 193 39 996 2377 715951221 715949871 0.000000e+00 1094.0
50 TraesCS2B01G499400 chr2A 83.811 908 100 15 6174 7036 515952721 515951816 0.000000e+00 819.0
51 TraesCS2B01G499400 chr2A 94.894 470 19 3 7077 7541 716168250 716168719 0.000000e+00 730.0
52 TraesCS2B01G499400 chr2A 87.280 511 41 10 720 1225 716055177 716055668 6.480000e-156 562.0
53 TraesCS2B01G499400 chr2A 82.273 660 77 21 7238 7865 716151857 716152508 1.410000e-147 534.0
54 TraesCS2B01G499400 chr2A 78.758 805 101 39 7878 8641 715890410 715891185 8.680000e-130 475.0
55 TraesCS2B01G499400 chr2A 85.082 429 39 6 298 718 716054100 716054511 1.920000e-111 414.0
56 TraesCS2B01G499400 chr2A 79.715 562 90 11 3883 4421 283760666 283761226 1.500000e-102 385.0
57 TraesCS2B01G499400 chr2A 84.225 355 48 6 8135 8486 715964215 715963866 1.190000e-88 339.0
58 TraesCS2B01G499400 chr2A 88.202 178 15 2 7077 7249 447141982 447142158 3.500000e-49 207.0
59 TraesCS2B01G499400 chr2A 90.833 120 7 2 8453 8571 715963866 715963750 3.570000e-34 158.0
60 TraesCS2B01G499400 chr2A 93.443 61 1 3 8636 8696 716169975 716170032 4.750000e-13 87.9
61 TraesCS2B01G499400 chr5D 83.955 2387 294 35 4717 7036 451680475 451678111 0.000000e+00 2204.0
62 TraesCS2B01G499400 chr5D 81.129 1346 168 42 4717 6025 242577548 242578844 0.000000e+00 1000.0
63 TraesCS2B01G499400 chr5D 83.648 899 110 16 6166 7036 152753047 152753936 0.000000e+00 811.0
64 TraesCS2B01G499400 chr5D 80.501 559 85 11 3886 4421 451681093 451680536 3.210000e-109 407.0
65 TraesCS2B01G499400 chr5D 85.484 186 25 2 3391 3575 556050271 556050087 9.790000e-45 193.0
66 TraesCS2B01G499400 chr5D 100.000 59 0 0 240 298 555229440 555229382 1.010000e-19 110.0
67 TraesCS2B01G499400 chr5D 78.014 141 28 1 1492 1632 545524073 545524210 1.710000e-12 86.1
68 TraesCS2B01G499400 chr5D 100.000 32 0 0 208 239 324425309 324425340 1.040000e-04 60.2
69 TraesCS2B01G499400 chr4A 83.696 2392 300 45 4717 7036 212684792 212687165 0.000000e+00 2174.0
70 TraesCS2B01G499400 chr4A 82.786 2376 294 68 4717 7032 210992768 210990448 0.000000e+00 2015.0
71 TraesCS2B01G499400 chr4A 82.555 1542 228 32 4768 6289 83876189 83877709 0.000000e+00 1319.0
72 TraesCS2B01G499400 chr4A 83.068 1069 131 21 6010 7036 119072737 119071677 0.000000e+00 926.0
73 TraesCS2B01G499400 chr4A 83.375 800 101 17 4717 5499 395022141 395022925 0.000000e+00 712.0
74 TraesCS2B01G499400 chr4A 85.124 363 39 7 4717 5065 565312088 565312449 3.280000e-94 357.0
75 TraesCS2B01G499400 chr4A 80.317 442 63 10 6614 7036 362106773 362106337 7.200000e-81 313.0
76 TraesCS2B01G499400 chr4A 91.707 205 14 3 1 203 671594975 671595178 2.030000e-71 281.0
77 TraesCS2B01G499400 chr4A 88.940 217 23 1 2376 2591 626962781 626962997 5.690000e-67 267.0
78 TraesCS2B01G499400 chr4A 91.925 161 8 4 7077 7233 215140061 215139902 4.490000e-53 220.0
79 TraesCS2B01G499400 chr4A 87.293 181 17 2 7066 7241 165708962 165709141 1.630000e-47 202.0
80 TraesCS2B01G499400 chr4A 94.340 53 3 0 1580 1632 623951619 623951567 2.210000e-11 82.4
81 TraesCS2B01G499400 chr1A 83.640 2390 303 43 4717 7036 22085385 22087756 0.000000e+00 2167.0
82 TraesCS2B01G499400 chr1A 83.033 2387 311 50 4717 7036 333875214 333872855 0.000000e+00 2078.0
83 TraesCS2B01G499400 chr1A 92.513 187 11 2 1 185 564568988 564568803 2.050000e-66 265.0
84 TraesCS2B01G499400 chr1A 92.350 183 12 2 1 182 331427899 331427718 9.520000e-65 259.0
85 TraesCS2B01G499400 chr1A 83.478 230 24 5 4717 4932 77280362 77280591 1.630000e-47 202.0
86 TraesCS2B01G499400 chr1A 85.870 184 25 1 3392 3575 241322475 241322293 2.720000e-45 195.0
87 TraesCS2B01G499400 chr1A 87.730 163 19 1 2371 2533 241322286 241322447 1.270000e-43 189.0
88 TraesCS2B01G499400 chr1A 78.014 141 28 1 1492 1632 569949196 569949059 1.710000e-12 86.1
89 TraesCS2B01G499400 chr1A 100.000 34 0 0 208 241 238114052 238114085 8.010000e-06 63.9
90 TraesCS2B01G499400 chr4B 83.480 2391 303 47 4717 7036 527936327 527938696 0.000000e+00 2143.0
91 TraesCS2B01G499400 chr4B 85.071 422 47 5 4717 5122 22843598 22843177 5.340000e-112 416.0
92 TraesCS2B01G499400 chr4B 80.570 561 78 18 3886 4421 247563476 247562922 4.150000e-108 403.0
93 TraesCS2B01G499400 chr4B 81.857 474 55 19 4717 5174 179299379 179299837 4.210000e-98 370.0
94 TraesCS2B01G499400 chr4B 79.286 560 90 12 3886 4421 183463436 183462879 1.520000e-97 368.0
95 TraesCS2B01G499400 chr4B 77.933 571 95 16 3880 4421 258766584 258766016 2.570000e-85 327.0
96 TraesCS2B01G499400 chr4B 84.424 321 45 4 4105 4421 363311980 363312299 2.590000e-80 311.0
97 TraesCS2B01G499400 chr4B 88.785 214 23 1 2379 2591 167394446 167394659 2.650000e-65 261.0
98 TraesCS2B01G499400 chr4B 92.308 182 13 1 1 181 2485776 2485957 3.420000e-64 257.0
99 TraesCS2B01G499400 chr4B 91.803 183 13 1 1 181 31878960 31878778 4.430000e-63 254.0
100 TraesCS2B01G499400 chr4B 91.803 183 12 2 1 181 97070131 97070312 1.590000e-62 252.0
101 TraesCS2B01G499400 chr4B 91.304 184 13 2 1 182 578248417 578248599 2.060000e-61 248.0
102 TraesCS2B01G499400 chr4B 91.209 182 15 1 1 181 162841503 162841684 7.410000e-61 246.0
103 TraesCS2B01G499400 chr4B 89.571 163 15 2 2379 2540 634963725 634963564 1.260000e-48 206.0
104 TraesCS2B01G499400 chr4B 89.571 163 14 3 2380 2540 634464853 634465014 4.520000e-48 204.0
105 TraesCS2B01G499400 chr4B 90.728 151 14 0 3426 3576 167394595 167394445 1.630000e-47 202.0
106 TraesCS2B01G499400 chr4B 86.885 183 21 3 3394 3575 634472877 634473057 1.630000e-47 202.0
107 TraesCS2B01G499400 chr4B 89.441 161 15 2 2378 2537 634473058 634472899 1.630000e-47 202.0
108 TraesCS2B01G499400 chr4B 89.441 161 15 2 3416 3575 634963566 634963725 1.630000e-47 202.0
109 TraesCS2B01G499400 chr4B 89.441 161 14 3 3416 3574 634465012 634464853 5.850000e-47 200.0
110 TraesCS2B01G499400 chr4B 86.096 187 21 5 3391 3575 610532220 610532037 7.570000e-46 196.0
111 TraesCS2B01G499400 chr4B 88.272 162 17 2 2378 2538 634955550 634955710 9.790000e-45 193.0
112 TraesCS2B01G499400 chr4B 88.272 162 15 4 2379 2538 610532037 610532196 3.520000e-44 191.0
113 TraesCS2B01G499400 chr4B 91.228 57 2 1 4717 4770 54028663 54028607 3.700000e-09 75.0
114 TraesCS2B01G499400 chr4D 83.466 2389 305 45 4717 7036 297224032 297226399 0.000000e+00 2141.0
115 TraesCS2B01G499400 chr4D 82.983 2380 314 52 4717 7036 253937470 253935122 0.000000e+00 2067.0
116 TraesCS2B01G499400 chr4D 82.120 2377 283 74 4717 7036 37041077 37038786 0.000000e+00 1905.0
117 TraesCS2B01G499400 chr4D 84.141 1217 140 23 5867 7036 65943022 65944232 0.000000e+00 1129.0
118 TraesCS2B01G499400 chr4D 81.300 631 93 10 6428 7036 172708305 172708932 1.110000e-133 488.0
119 TraesCS2B01G499400 chr4D 80.287 558 85 12 3887 4421 491729329 491729884 1.930000e-106 398.0
120 TraesCS2B01G499400 chr4D 79.964 559 87 11 3886 4421 220343223 220342667 1.160000e-103 388.0
121 TraesCS2B01G499400 chr4D 78.750 560 93 12 3886 4421 33429259 33428702 1.530000e-92 351.0
122 TraesCS2B01G499400 chr4D 79.330 537 84 13 3909 4421 472687783 472687250 1.530000e-92 351.0
123 TraesCS2B01G499400 chr4D 90.135 223 21 1 2370 2591 6901340 6901118 1.210000e-73 289.0
124 TraesCS2B01G499400 chr4D 83.660 306 42 7 4105 4405 9261213 9261515 2.030000e-71 281.0
125 TraesCS2B01G499400 chr4D 90.625 160 15 0 3416 3575 6901172 6901331 7.510000e-51 213.0
126 TraesCS2B01G499400 chr4D 89.506 162 17 0 3416 3577 473813210 473813371 1.260000e-48 206.0
127 TraesCS2B01G499400 chr4D 83.243 185 29 2 3391 3575 482938099 482938281 1.650000e-37 169.0
128 TraesCS2B01G499400 chr4D 82.609 161 28 0 2379 2539 482938281 482938121 1.000000e-29 143.0
129 TraesCS2B01G499400 chr4D 100.000 34 0 0 208 241 123428824 123428857 8.010000e-06 63.9
130 TraesCS2B01G499400 chr4D 100.000 29 0 0 3549 3577 309699243 309699215 5.000000e-03 54.7
131 TraesCS2B01G499400 chr3A 83.180 2390 310 45 4717 7036 244270037 244272404 0.000000e+00 2102.0
132 TraesCS2B01G499400 chr3A 82.137 2396 326 49 4717 7036 62660237 62657868 0.000000e+00 1960.0
133 TraesCS2B01G499400 chr3A 81.395 301 38 6 6753 7036 259332731 259333030 7.460000e-56 230.0
134 TraesCS2B01G499400 chr3A 82.553 235 40 1 3340 3574 699228137 699228370 1.260000e-48 206.0
135 TraesCS2B01G499400 chr1B 82.468 1888 234 43 4717 6557 388763718 388765555 0.000000e+00 1563.0
136 TraesCS2B01G499400 chr1B 82.940 1442 178 42 4717 6135 255499312 255500708 0.000000e+00 1238.0
137 TraesCS2B01G499400 chr1B 99.490 392 2 0 2378 2769 598688853 598689244 0.000000e+00 713.0
138 TraesCS2B01G499400 chr1B 98.214 392 6 1 3184 3575 598689477 598689867 0.000000e+00 684.0
139 TraesCS2B01G499400 chr1B 94.086 186 8 2 1 184 441855601 441855417 7.300000e-71 279.0
140 TraesCS2B01G499400 chr1B 93.158 190 11 1 1 188 43999288 43999099 2.630000e-70 278.0
141 TraesCS2B01G499400 chr1B 93.478 184 10 1 1 182 646946898 646947081 1.220000e-68 272.0
142 TraesCS2B01G499400 chr1B 92.935 184 12 1 1 183 449760471 449760654 5.690000e-67 267.0
143 TraesCS2B01G499400 chr1B 95.625 160 7 0 3416 3575 598689013 598688854 3.420000e-64 257.0
144 TraesCS2B01G499400 chr1B 95.625 160 7 0 2379 2538 598689867 598689708 3.420000e-64 257.0
145 TraesCS2B01G499400 chr1B 100.000 34 0 0 208 241 491443616 491443649 8.010000e-06 63.9
146 TraesCS2B01G499400 chr7D 84.444 1125 131 19 5952 7036 397570823 397569703 0.000000e+00 1068.0
147 TraesCS2B01G499400 chr7D 85.358 321 42 4 4105 4421 390686972 390686653 2.570000e-85 327.0
148 TraesCS2B01G499400 chr7D 81.910 398 55 4 6656 7036 474076270 474076667 4.300000e-83 320.0
149 TraesCS2B01G499400 chr7D 84.388 237 35 2 3340 3575 529482496 529482731 2.070000e-56 231.0
150 TraesCS2B01G499400 chr7A 82.880 736 85 23 4717 5432 565339310 565338596 2.930000e-174 623.0
151 TraesCS2B01G499400 chr7A 76.809 539 105 14 3902 4421 573438095 573438632 1.570000e-72 285.0
152 TraesCS2B01G499400 chr7A 89.720 214 19 2 2379 2591 110944166 110943955 4.400000e-68 270.0
153 TraesCS2B01G499400 chr7A 84.034 238 33 5 3340 3575 563821878 563821644 3.470000e-54 224.0
154 TraesCS2B01G499400 chr6D 81.767 532 74 10 3902 4411 438916117 438916647 3.190000e-114 424.0
155 TraesCS2B01G499400 chr6D 80.784 536 79 11 3909 4421 221860849 221860315 1.930000e-106 398.0
156 TraesCS2B01G499400 chr6D 79.891 552 86 12 3883 4411 396920944 396921493 1.950000e-101 381.0
157 TraesCS2B01G499400 chr6D 78.957 556 83 17 3888 4411 126865548 126866101 1.970000e-91 348.0
158 TraesCS2B01G499400 chr6D 83.750 320 47 4 4106 4421 314504015 314504333 2.020000e-76 298.0
159 TraesCS2B01G499400 chr6D 78.144 485 79 16 3960 4421 316823468 316822988 5.650000e-72 283.0
160 TraesCS2B01G499400 chr6D 83.165 297 46 3 4119 4411 365811162 365810866 1.580000e-67 268.0
161 TraesCS2B01G499400 chr6D 84.409 186 27 2 4237 4421 135099210 135099394 2.120000e-41 182.0
162 TraesCS2B01G499400 chr6D 81.283 187 33 2 1055 1240 31479751 31479936 5.980000e-32 150.0
163 TraesCS2B01G499400 chr6D 87.903 124 15 0 3459 3582 126844999 126844876 7.730000e-31 147.0
164 TraesCS2B01G499400 chr6D 88.889 117 13 0 2379 2495 126844883 126844999 2.780000e-30 145.0
165 TraesCS2B01G499400 chr6D 80.000 170 28 6 2379 2546 460168026 460168191 4.680000e-23 121.0
166 TraesCS2B01G499400 chr6D 80.892 157 26 4 3421 3575 460168180 460168026 4.680000e-23 121.0
167 TraesCS2B01G499400 chr6D 79.394 165 29 5 2378 2540 155781117 155781278 2.820000e-20 111.0
168 TraesCS2B01G499400 chr6D 100.000 58 0 0 240 297 183392294 183392351 3.650000e-19 108.0
169 TraesCS2B01G499400 chr6D 98.305 59 1 0 240 298 430476318 430476376 4.720000e-18 104.0
170 TraesCS2B01G499400 chr6D 97.059 34 1 0 208 241 168771893 168771926 3.730000e-04 58.4
171 TraesCS2B01G499400 chr3B 81.111 540 84 10 3883 4421 694028526 694029048 5.340000e-112 416.0
172 TraesCS2B01G499400 chr3B 95.109 184 7 1 1 182 659780593 659780410 1.210000e-73 289.0
173 TraesCS2B01G499400 chr3B 80.564 319 42 8 6735 7036 293747508 293747823 2.680000e-55 228.0
174 TraesCS2B01G499400 chr3B 83.333 210 25 6 7077 7277 781703764 781703556 1.640000e-42 185.0
175 TraesCS2B01G499400 chr3D 80.605 562 84 12 3883 4421 172595084 172595643 2.480000e-110 411.0
176 TraesCS2B01G499400 chr3D 86.688 308 40 1 4105 4411 525733573 525733880 3.300000e-89 340.0
177 TraesCS2B01G499400 chr3D 88.824 170 13 2 7077 7241 118539192 118539024 4.520000e-48 204.0
178 TraesCS2B01G499400 chr6A 80.505 554 80 14 3883 4411 365771586 365772136 5.370000e-107 399.0
179 TraesCS2B01G499400 chr6A 84.112 321 47 2 4105 4421 445263432 445263112 3.350000e-79 307.0
180 TraesCS2B01G499400 chr6A 79.909 438 62 12 4009 4421 102661186 102660750 2.020000e-76 298.0
181 TraesCS2B01G499400 chr6A 93.370 181 12 0 1 181 162443796 162443976 1.580000e-67 268.0
182 TraesCS2B01G499400 chr6A 93.407 182 11 1 1 181 602449787 602449968 1.580000e-67 268.0
183 TraesCS2B01G499400 chr6A 92.857 182 12 1 1 181 410889732 410889913 7.360000e-66 263.0
184 TraesCS2B01G499400 chr6A 88.785 214 23 1 2379 2591 411899134 411898921 2.650000e-65 261.0
185 TraesCS2B01G499400 chr6A 88.824 170 13 3 7078 7242 38142514 38142346 4.520000e-48 204.0
186 TraesCS2B01G499400 chr6A 88.166 169 18 2 2378 2546 299336264 299336430 5.850000e-47 200.0
187 TraesCS2B01G499400 chr6A 85.326 184 26 1 3392 3575 299336447 299336265 1.270000e-43 189.0
188 TraesCS2B01G499400 chr6A 79.452 219 43 2 1026 1243 31745481 31745264 4.620000e-33 154.0
189 TraesCS2B01G499400 chr6A 100.000 59 0 0 240 298 597220589 597220531 1.010000e-19 110.0
190 TraesCS2B01G499400 chr6A 98.305 59 1 0 240 298 4139778 4139836 4.720000e-18 104.0
191 TraesCS2B01G499400 chr6A 98.305 59 1 0 240 298 4164557 4164615 4.720000e-18 104.0
192 TraesCS2B01G499400 chr6A 76.500 200 26 8 4717 4899 330046771 330046966 1.320000e-13 89.8
193 TraesCS2B01G499400 chr6A 100.000 34 0 0 208 241 84439260 84439293 8.010000e-06 63.9
194 TraesCS2B01G499400 chr6A 100.000 34 0 0 208 241 608878125 608878092 8.010000e-06 63.9
195 TraesCS2B01G499400 chr6B 80.224 536 81 12 3909 4421 593367226 593367759 7.000000e-101 379.0
196 TraesCS2B01G499400 chr6B 91.818 220 16 2 2373 2591 672133943 672134161 1.210000e-78 305.0
197 TraesCS2B01G499400 chr6B 94.565 184 8 1 1 182 463556843 463556660 5.650000e-72 283.0
198 TraesCS2B01G499400 chr6B 94.565 184 7 2 1 182 642994408 642994590 2.030000e-71 281.0
199 TraesCS2B01G499400 chr6B 94.536 183 7 2 1 182 122735856 122736036 7.300000e-71 279.0
200 TraesCS2B01G499400 chr6B 94.022 184 9 2 1 182 687020255 687020072 2.630000e-70 278.0
201 TraesCS2B01G499400 chr6B 93.478 184 10 2 1 182 679361455 679361272 1.220000e-68 272.0
202 TraesCS2B01G499400 chr6B 93.333 150 10 0 3426 3575 672134097 672133948 1.250000e-53 222.0
203 TraesCS2B01G499400 chr6B 100.000 34 0 0 208 241 596625438 596625471 8.010000e-06 63.9
204 TraesCS2B01G499400 chr1D 79.643 560 87 13 3886 4421 170827390 170826834 2.520000e-100 377.0
205 TraesCS2B01G499400 chr1D 79.520 542 89 14 3886 4411 205120140 205119605 5.450000e-97 366.0
206 TraesCS2B01G499400 chr1D 83.895 267 27 5 4717 4972 183021281 183021542 3.450000e-59 241.0
207 TraesCS2B01G499400 chr1D 87.654 162 20 0 2379 2540 416511933 416512094 1.270000e-43 189.0
208 TraesCS2B01G499400 chr1D 87.578 161 20 0 3416 3576 416512092 416511932 4.550000e-43 187.0
209 TraesCS2B01G499400 chr1D 84.043 188 26 4 3393 3579 433924176 433923992 2.740000e-40 178.0
210 TraesCS2B01G499400 chr1D 83.000 200 31 2 3390 3587 436981443 436981641 2.740000e-40 178.0
211 TraesCS2B01G499400 chr1D 85.897 156 21 1 2379 2534 433923996 433924150 2.130000e-36 165.0
212 TraesCS2B01G499400 chr1D 84.024 169 24 3 2379 2546 370349463 370349297 9.930000e-35 159.0
213 TraesCS2B01G499400 chr1D 81.967 183 32 1 3393 3575 436980560 436980379 4.620000e-33 154.0
214 TraesCS2B01G499400 chr1D 82.840 169 29 0 2370 2538 436980370 436980538 1.660000e-32 152.0
215 TraesCS2B01G499400 chr1D 100.000 32 0 0 210 241 351074331 351074300 1.040000e-04 60.2
216 TraesCS2B01G499400 chr1D 100.000 29 0 0 208 236 399044834 399044862 5.000000e-03 54.7
217 TraesCS2B01G499400 chrUn 78.036 560 95 13 3883 4421 112961990 112962542 2.570000e-85 327.0
218 TraesCS2B01G499400 chrUn 82.958 311 48 4 4105 4411 129560337 129560028 9.450000e-70 276.0
219 TraesCS2B01G499400 chrUn 92.973 185 11 1 1 183 35852304 35852488 1.580000e-67 268.0
220 TraesCS2B01G499400 chrUn 92.973 185 11 1 1 183 299963137 299962953 1.580000e-67 268.0
221 TraesCS2B01G499400 chrUn 91.848 184 12 1 1 181 41728124 41728307 4.430000e-63 254.0
222 TraesCS2B01G499400 chrUn 91.209 182 9 1 1 182 413739466 413739640 3.450000e-59 241.0
223 TraesCS2B01G499400 chrUn 87.500 184 5 1 1 184 50003111 50003276 7.570000e-46 196.0
224 TraesCS2B01G499400 chrUn 88.199 161 17 2 3416 3575 438150624 438150783 3.520000e-44 191.0
225 TraesCS2B01G499400 chrUn 88.199 161 17 2 2379 2538 438150783 438150624 3.520000e-44 191.0
226 TraesCS2B01G499400 chrUn 84.865 185 25 3 3392 3575 10202368 10202186 5.890000e-42 183.0
227 TraesCS2B01G499400 chrUn 87.037 162 19 2 2378 2538 10202185 10202345 2.120000e-41 182.0
228 TraesCS2B01G499400 chrUn 86.420 162 22 0 2379 2540 10231183 10231022 2.740000e-40 178.0
229 TraesCS2B01G499400 chrUn 86.335 161 22 0 3416 3576 10231024 10231184 9.860000e-40 176.0
230 TraesCS2B01G499400 chrUn 86.709 158 15 4 1 156 41728077 41727924 4.590000e-38 171.0
231 TraesCS2B01G499400 chrUn 95.789 95 4 0 1 95 407411177 407411083 4.620000e-33 154.0
232 TraesCS2B01G499400 chrUn 95.789 95 4 0 1 95 479002087 479002181 4.620000e-33 154.0
233 TraesCS2B01G499400 chrUn 83.436 163 23 4 2378 2538 30124000 30124160 2.150000e-31 148.0
234 TraesCS2B01G499400 chrUn 84.177 158 19 4 1 156 35852278 35852125 2.150000e-31 148.0
235 TraesCS2B01G499400 chrUn 84.177 158 19 4 1 156 299963163 299963316 2.150000e-31 148.0
236 TraesCS2B01G499400 chrUn 82.911 158 19 5 1 155 50003064 50002912 1.670000e-27 135.0
237 TraesCS2B01G499400 chrUn 83.019 159 18 5 1 156 247957386 247957538 1.670000e-27 135.0
238 TraesCS2B01G499400 chrUn 100.000 59 0 0 240 298 206792470 206792528 1.010000e-19 110.0
239 TraesCS2B01G499400 chrUn 100.000 59 0 0 240 298 246705114 246705172 1.010000e-19 110.0
240 TraesCS2B01G499400 chrUn 100.000 59 0 0 240 298 266185271 266185329 1.010000e-19 110.0
241 TraesCS2B01G499400 chrUn 100.000 59 0 0 240 298 432754048 432754106 1.010000e-19 110.0
242 TraesCS2B01G499400 chrUn 83.200 125 13 7 2371 2490 231478717 231478838 3.650000e-19 108.0
243 TraesCS2B01G499400 chrUn 83.200 125 13 6 2371 2490 244854385 244854264 3.650000e-19 108.0
244 TraesCS2B01G499400 chrUn 82.906 117 20 0 3461 3577 108810144 108810028 1.310000e-18 106.0
245 TraesCS2B01G499400 chrUn 98.305 59 1 0 240 298 62723142 62723084 4.720000e-18 104.0
246 TraesCS2B01G499400 chrUn 98.246 57 1 0 242 298 319758847 319758903 6.100000e-17 100.0
247 TraesCS2B01G499400 chrUn 98.246 57 1 0 242 298 323694848 323694792 6.100000e-17 100.0
248 TraesCS2B01G499400 chrUn 98.246 57 1 0 242 298 409142445 409142501 6.100000e-17 100.0
249 TraesCS2B01G499400 chrUn 81.197 117 18 3 2379 2493 108810030 108810144 3.670000e-14 91.6
250 TraesCS2B01G499400 chrUn 89.231 65 0 1 118 182 23419887 23419944 3.700000e-09 75.0
251 TraesCS2B01G499400 chrUn 100.000 34 0 0 208 241 260198633 260198600 8.010000e-06 63.9
252 TraesCS2B01G499400 chrUn 100.000 34 0 0 208 241 393426577 393426544 8.010000e-06 63.9
253 TraesCS2B01G499400 chrUn 100.000 34 0 0 208 241 446319362 446319395 8.010000e-06 63.9
254 TraesCS2B01G499400 chr5B 82.940 381 47 7 4723 5085 158786604 158786224 2.570000e-85 327.0
255 TraesCS2B01G499400 chr5B 83.801 321 48 3 4105 4421 291067883 291067563 1.560000e-77 302.0
256 TraesCS2B01G499400 chr5B 96.196 184 5 1 1 182 684004241 684004058 5.610000e-77 300.0
257 TraesCS2B01G499400 chr5B 91.628 215 16 2 2378 2591 610382950 610383163 7.250000e-76 296.0
258 TraesCS2B01G499400 chr5B 95.082 183 8 1 1 182 545193121 545192939 4.360000e-73 287.0
259 TraesCS2B01G499400 chr5B 88.785 214 23 1 2379 2591 14665283 14665070 2.650000e-65 261.0
260 TraesCS2B01G499400 chr5B 94.000 150 8 1 3426 3575 610383099 610382951 9.650000e-55 226.0
261 TraesCS2B01G499400 chr5B 86.631 187 24 1 3391 3577 648747988 648748173 1.260000e-48 206.0
262 TraesCS2B01G499400 chr7B 83.051 354 54 4 8135 8486 511462095 511461746 5.570000e-82 316.0
263 TraesCS2B01G499400 chr7B 90.698 215 19 1 2378 2591 525253720 525253934 1.570000e-72 285.0
264 TraesCS2B01G499400 chr7B 94.054 185 9 1 1 183 636388963 636388779 7.300000e-71 279.0
265 TraesCS2B01G499400 chr7B 89.720 214 20 2 2379 2591 228389174 228389386 1.220000e-68 272.0
266 TraesCS2B01G499400 chr7B 92.473 186 12 2 1 184 728874071 728873886 2.050000e-66 265.0
267 TraesCS2B01G499400 chr7B 92.391 184 12 1 1 182 704819605 704819788 2.650000e-65 261.0
268 TraesCS2B01G499400 chr7B 91.444 187 11 4 1 184 602553247 602553063 1.590000e-62 252.0
269 TraesCS2B01G499400 chr7B 84.746 236 35 1 3341 3576 525254741 525254975 1.600000e-57 235.0
270 TraesCS2B01G499400 chr7B 88.281 128 11 2 8445 8571 511461754 511461630 5.980000e-32 150.0
271 TraesCS2B01G499400 chr7B 82.123 179 26 5 3886 4062 13799265 13799091 2.150000e-31 148.0
272 TraesCS2B01G499400 chr7B 100.000 59 0 0 240 298 139627552 139627610 1.010000e-19 110.0
273 TraesCS2B01G499400 chr7B 100.000 59 0 0 240 298 698134728 698134786 1.010000e-19 110.0
274 TraesCS2B01G499400 chr7B 100.000 59 0 0 240 298 716803926 716803984 1.010000e-19 110.0
275 TraesCS2B01G499400 chr7B 100.000 59 0 0 240 298 742929367 742929309 1.010000e-19 110.0
276 TraesCS2B01G499400 chr7B 100.000 34 0 0 208 241 742921809 742921842 8.010000e-06 63.9
277 TraesCS2B01G499400 chr5A 89.302 215 21 2 2379 2591 26686519 26686305 1.580000e-67 268.0
278 TraesCS2B01G499400 chr5A 81.780 236 41 2 3340 3575 26685641 26685408 7.570000e-46 196.0
279 TraesCS2B01G499400 chr5A 85.567 194 19 5 7077 7262 106360465 106360273 2.720000e-45 195.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G499400 chr2B 695507144 695516694 9550 False 4104.775000 8929 97.692250 1 9551 4 chr2B.!!$F5 9550
1 TraesCS2B01G499400 chr2B 695106859 695108204 1345 False 1085.000000 1085 81.420000 996 2377 1 chr2B.!!$F4 1381
2 TraesCS2B01G499400 chr2B 695170836 695172093 1257 True 1068.000000 1068 82.238000 1026 2286 1 chr2B.!!$R1 1260
3 TraesCS2B01G499400 chr2B 695436518 695439892 3374 True 1040.500000 1251 82.711500 1022 8571 2 chr2B.!!$R5 7549
4 TraesCS2B01G499400 chr2B 695409808 695414310 4502 True 473.500000 791 88.325500 1022 8562 2 chr2B.!!$R4 7540
5 TraesCS2B01G499400 chr2B 139847628 139848188 560 False 374.000000 374 79.396000 3883 4421 1 chr2B.!!$F2 538
6 TraesCS2B01G499400 chr2B 506053266 506053813 547 False 333.000000 333 78.597000 3883 4409 1 chr2B.!!$F3 526
7 TraesCS2B01G499400 chr2D 577536217 577537493 1276 False 1131.000000 1131 82.822000 993 2283 1 chr2D.!!$F2 1290
8 TraesCS2B01G499400 chr2D 578040550 578044275 3725 False 1123.500000 1731 83.862500 720 7865 2 chr2D.!!$F5 7145
9 TraesCS2B01G499400 chr2D 578320432 578326106 5674 False 1121.571429 2398 92.097000 1635 8793 7 chr2D.!!$F7 7158
10 TraesCS2B01G499400 chr2D 577801575 577802846 1271 True 1051.000000 1051 81.846000 996 2277 1 chr2D.!!$R2 1281
11 TraesCS2B01G499400 chr2D 578307405 578313355 5950 False 976.000000 2158 91.093250 970 7406 4 chr2D.!!$F6 6436
12 TraesCS2B01G499400 chr2D 577440847 577441984 1137 False 935.000000 935 81.655000 1193 2357 1 chr2D.!!$F1 1164
13 TraesCS2B01G499400 chr2D 577579216 577581911 2695 True 823.000000 1182 80.644000 996 8641 2 chr2D.!!$R3 7645
14 TraesCS2B01G499400 chr2D 380416702 380417607 905 True 808.000000 808 83.590000 6174 7036 1 chr2D.!!$R1 862
15 TraesCS2B01G499400 chr2D 577827184 577829635 2451 True 625.000000 1375 86.893000 995 8571 3 chr2D.!!$R4 7576
16 TraesCS2B01G499400 chr2A 450064493 450066864 2371 True 2134.000000 2134 83.389000 4717 7036 1 chr2A.!!$R1 2319
17 TraesCS2B01G499400 chr2A 609159010 609161380 2370 True 2076.000000 2076 82.992000 4717 7036 1 chr2A.!!$R4 2319
18 TraesCS2B01G499400 chr2A 716163646 716170229 6583 False 1323.557143 2316 92.760857 995 8934 7 chr2A.!!$F6 7939
19 TraesCS2B01G499400 chr2A 569199190 569200344 1154 True 1182.000000 1182 85.554000 5909 7036 1 chr2A.!!$R3 1127
20 TraesCS2B01G499400 chr2A 715949871 715951221 1350 True 1094.000000 1094 81.558000 996 2377 1 chr2A.!!$R5 1381
21 TraesCS2B01G499400 chr2A 515951816 515952721 905 True 819.000000 819 83.811000 6174 7036 1 chr2A.!!$R2 862
22 TraesCS2B01G499400 chr2A 715963750 715967213 3463 True 609.000000 1330 86.419000 988 8571 3 chr2A.!!$R6 7583
23 TraesCS2B01G499400 chr2A 716151857 716152508 651 False 534.000000 534 82.273000 7238 7865 1 chr2A.!!$F4 627
24 TraesCS2B01G499400 chr2A 716054100 716055668 1568 False 488.000000 562 86.181000 298 1225 2 chr2A.!!$F5 927
25 TraesCS2B01G499400 chr2A 715890410 715891185 775 False 475.000000 475 78.758000 7878 8641 1 chr2A.!!$F3 763
26 TraesCS2B01G499400 chr2A 283760666 283761226 560 False 385.000000 385 79.715000 3883 4421 1 chr2A.!!$F1 538
27 TraesCS2B01G499400 chr5D 451678111 451681093 2982 True 1305.500000 2204 82.228000 3886 7036 2 chr5D.!!$R3 3150
28 TraesCS2B01G499400 chr5D 242577548 242578844 1296 False 1000.000000 1000 81.129000 4717 6025 1 chr5D.!!$F2 1308
29 TraesCS2B01G499400 chr5D 152753047 152753936 889 False 811.000000 811 83.648000 6166 7036 1 chr5D.!!$F1 870
30 TraesCS2B01G499400 chr4A 212684792 212687165 2373 False 2174.000000 2174 83.696000 4717 7036 1 chr4A.!!$F3 2319
31 TraesCS2B01G499400 chr4A 210990448 210992768 2320 True 2015.000000 2015 82.786000 4717 7032 1 chr4A.!!$R2 2315
32 TraesCS2B01G499400 chr4A 83876189 83877709 1520 False 1319.000000 1319 82.555000 4768 6289 1 chr4A.!!$F1 1521
33 TraesCS2B01G499400 chr4A 119071677 119072737 1060 True 926.000000 926 83.068000 6010 7036 1 chr4A.!!$R1 1026
34 TraesCS2B01G499400 chr4A 395022141 395022925 784 False 712.000000 712 83.375000 4717 5499 1 chr4A.!!$F4 782
35 TraesCS2B01G499400 chr1A 22085385 22087756 2371 False 2167.000000 2167 83.640000 4717 7036 1 chr1A.!!$F1 2319
36 TraesCS2B01G499400 chr1A 333872855 333875214 2359 True 2078.000000 2078 83.033000 4717 7036 1 chr1A.!!$R3 2319
37 TraesCS2B01G499400 chr4B 527936327 527938696 2369 False 2143.000000 2143 83.480000 4717 7036 1 chr4B.!!$F7 2319
38 TraesCS2B01G499400 chr4B 247562922 247563476 554 True 403.000000 403 80.570000 3886 4421 1 chr4B.!!$R6 535
39 TraesCS2B01G499400 chr4B 183462879 183463436 557 True 368.000000 368 79.286000 3886 4421 1 chr4B.!!$R5 535
40 TraesCS2B01G499400 chr4B 258766016 258766584 568 True 327.000000 327 77.933000 3880 4421 1 chr4B.!!$R7 541
41 TraesCS2B01G499400 chr4D 297224032 297226399 2367 False 2141.000000 2141 83.466000 4717 7036 1 chr4D.!!$F6 2319
42 TraesCS2B01G499400 chr4D 253935122 253937470 2348 True 2067.000000 2067 82.983000 4717 7036 1 chr4D.!!$R5 2319
43 TraesCS2B01G499400 chr4D 37038786 37041077 2291 True 1905.000000 1905 82.120000 4717 7036 1 chr4D.!!$R3 2319
44 TraesCS2B01G499400 chr4D 65943022 65944232 1210 False 1129.000000 1129 84.141000 5867 7036 1 chr4D.!!$F3 1169
45 TraesCS2B01G499400 chr4D 172708305 172708932 627 False 488.000000 488 81.300000 6428 7036 1 chr4D.!!$F5 608
46 TraesCS2B01G499400 chr4D 491729329 491729884 555 False 398.000000 398 80.287000 3887 4421 1 chr4D.!!$F9 534
47 TraesCS2B01G499400 chr4D 220342667 220343223 556 True 388.000000 388 79.964000 3886 4421 1 chr4D.!!$R4 535
48 TraesCS2B01G499400 chr4D 33428702 33429259 557 True 351.000000 351 78.750000 3886 4421 1 chr4D.!!$R2 535
49 TraesCS2B01G499400 chr4D 472687250 472687783 533 True 351.000000 351 79.330000 3909 4421 1 chr4D.!!$R7 512
50 TraesCS2B01G499400 chr3A 244270037 244272404 2367 False 2102.000000 2102 83.180000 4717 7036 1 chr3A.!!$F1 2319
51 TraesCS2B01G499400 chr3A 62657868 62660237 2369 True 1960.000000 1960 82.137000 4717 7036 1 chr3A.!!$R1 2319
52 TraesCS2B01G499400 chr1B 388763718 388765555 1837 False 1563.000000 1563 82.468000 4717 6557 1 chr1B.!!$F2 1840
53 TraesCS2B01G499400 chr1B 255499312 255500708 1396 False 1238.000000 1238 82.940000 4717 6135 1 chr1B.!!$F1 1418
54 TraesCS2B01G499400 chr1B 598688853 598689867 1014 False 698.500000 713 98.852000 2378 3575 2 chr1B.!!$F6 1197
55 TraesCS2B01G499400 chr1B 598688854 598689867 1013 True 257.000000 257 95.625000 2379 3575 2 chr1B.!!$R3 1196
56 TraesCS2B01G499400 chr7D 397569703 397570823 1120 True 1068.000000 1068 84.444000 5952 7036 1 chr7D.!!$R2 1084
57 TraesCS2B01G499400 chr7A 565338596 565339310 714 True 623.000000 623 82.880000 4717 5432 1 chr7A.!!$R3 715
58 TraesCS2B01G499400 chr7A 573438095 573438632 537 False 285.000000 285 76.809000 3902 4421 1 chr7A.!!$F1 519
59 TraesCS2B01G499400 chr6D 438916117 438916647 530 False 424.000000 424 81.767000 3902 4411 1 chr6D.!!$F11 509
60 TraesCS2B01G499400 chr6D 221860315 221860849 534 True 398.000000 398 80.784000 3909 4421 1 chr6D.!!$R2 512
61 TraesCS2B01G499400 chr6D 396920944 396921493 549 False 381.000000 381 79.891000 3883 4411 1 chr6D.!!$F9 528
62 TraesCS2B01G499400 chr6D 126865548 126866101 553 False 348.000000 348 78.957000 3888 4411 1 chr6D.!!$F3 523
63 TraesCS2B01G499400 chr3B 694028526 694029048 522 False 416.000000 416 81.111000 3883 4421 1 chr3B.!!$F2 538
64 TraesCS2B01G499400 chr3D 172595084 172595643 559 False 411.000000 411 80.605000 3883 4421 1 chr3D.!!$F1 538
65 TraesCS2B01G499400 chr6A 365771586 365772136 550 False 399.000000 399 80.505000 3883 4411 1 chr6A.!!$F7 528
66 TraesCS2B01G499400 chr6B 593367226 593367759 533 False 379.000000 379 80.224000 3909 4421 1 chr6B.!!$F2 512
67 TraesCS2B01G499400 chr1D 170826834 170827390 556 True 377.000000 377 79.643000 3886 4421 1 chr1D.!!$R1 535
68 TraesCS2B01G499400 chr1D 205119605 205120140 535 True 366.000000 366 79.520000 3886 4411 1 chr1D.!!$R2 525
69 TraesCS2B01G499400 chrUn 112961990 112962542 552 False 327.000000 327 78.036000 3883 4421 1 chrUn.!!$F9 538
70 TraesCS2B01G499400 chr7B 525253720 525254975 1255 False 260.000000 285 87.722000 2378 3576 2 chr7B.!!$F7 1198
71 TraesCS2B01G499400 chr5A 26685408 26686519 1111 True 232.000000 268 85.541000 2379 3575 2 chr5A.!!$R2 1196

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
520 521 0.109226 GACCCTTCGTCCAAGACTCG 60.109 60.000 0.00 0.00 35.23 4.18 F
878 1551 0.179121 TGCATCGTATCACCGACACC 60.179 55.000 0.00 0.00 40.08 4.16 F
931 1609 0.666577 ACGCTTCTCCCGTTCGAAAG 60.667 55.000 0.00 0.51 34.96 2.62 F
2205 4055 2.240921 TCCTTTGGTATGCAGCATGGTA 59.759 45.455 18.81 0.66 35.86 3.25 F
4244 7589 0.036875 GGACAGAAAGTGGAGGTGGG 59.963 60.000 0.00 0.00 0.00 4.61 F
4979 8374 0.037790 AAGAGAAGACAGGCGTGCTC 60.038 55.000 6.26 5.06 0.00 4.26 F
6619 10270 0.321919 TGCTGCAGAAGGATGGTGAC 60.322 55.000 20.43 0.00 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2375 4243 2.030805 GGTTTTCTGCAATTCACTCGCT 60.031 45.455 0.0 0.0 0.0 4.93 R
2376 4244 2.287547 TGGTTTTCTGCAATTCACTCGC 60.288 45.455 0.0 0.0 0.0 5.03 R
3359 5853 0.327964 AAATCTCCTCCCCTCCCTGG 60.328 60.000 0.0 0.0 0.0 4.45 R
4282 7636 0.603065 GCCCGCTCCATTCTTGTTTT 59.397 50.000 0.0 0.0 0.0 2.43 R
6527 10168 0.325390 CTAACCTCCTCCCCCTCGTT 60.325 60.000 0.0 0.0 0.0 3.85 R
6720 10380 0.396139 TGCCGTCCTATAGAACCCGT 60.396 55.000 0.0 0.0 0.0 5.28 R
8706 12926 0.094730 GATGTTACAGTCGTTGCCGC 59.905 55.000 0.0 0.0 0.0 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.391577 TTTTTGCTGAGAGCTGCACA 58.608 45.000 1.02 0.00 46.64 4.57
28 29 1.612676 TTTTGCTGAGAGCTGCACAT 58.387 45.000 1.02 0.00 46.64 3.21
29 30 2.477845 TTTGCTGAGAGCTGCACATA 57.522 45.000 1.02 0.00 46.64 2.29
30 31 2.477845 TTGCTGAGAGCTGCACATAA 57.522 45.000 1.02 0.00 46.64 1.90
31 32 2.019948 TGCTGAGAGCTGCACATAAG 57.980 50.000 1.02 0.00 42.93 1.73
32 33 1.277273 TGCTGAGAGCTGCACATAAGT 59.723 47.619 1.02 0.00 42.93 2.24
33 34 1.932511 GCTGAGAGCTGCACATAAGTC 59.067 52.381 1.02 0.00 38.45 3.01
34 35 2.548875 CTGAGAGCTGCACATAAGTCC 58.451 52.381 1.02 0.00 0.00 3.85
35 36 1.901833 TGAGAGCTGCACATAAGTCCA 59.098 47.619 1.02 0.00 0.00 4.02
36 37 2.302733 TGAGAGCTGCACATAAGTCCAA 59.697 45.455 1.02 0.00 0.00 3.53
37 38 3.244526 TGAGAGCTGCACATAAGTCCAAA 60.245 43.478 1.02 0.00 0.00 3.28
38 39 3.944015 GAGAGCTGCACATAAGTCCAAAT 59.056 43.478 1.02 0.00 0.00 2.32
39 40 3.693085 AGAGCTGCACATAAGTCCAAATG 59.307 43.478 1.02 0.00 0.00 2.32
40 41 3.424703 AGCTGCACATAAGTCCAAATGT 58.575 40.909 1.02 0.00 36.78 2.71
41 42 3.828451 AGCTGCACATAAGTCCAAATGTT 59.172 39.130 1.02 0.00 34.12 2.71
42 43 4.281688 AGCTGCACATAAGTCCAAATGTTT 59.718 37.500 1.02 0.00 34.12 2.83
43 44 4.990426 GCTGCACATAAGTCCAAATGTTTT 59.010 37.500 0.00 0.00 34.12 2.43
44 45 5.107375 GCTGCACATAAGTCCAAATGTTTTG 60.107 40.000 0.00 0.00 34.12 2.44
45 46 6.154203 TGCACATAAGTCCAAATGTTTTGA 57.846 33.333 1.65 0.00 34.12 2.69
46 47 6.577103 TGCACATAAGTCCAAATGTTTTGAA 58.423 32.000 1.65 0.00 34.12 2.69
47 48 7.044181 TGCACATAAGTCCAAATGTTTTGAAA 58.956 30.769 1.65 0.00 34.12 2.69
48 49 7.550551 TGCACATAAGTCCAAATGTTTTGAAAA 59.449 29.630 1.65 0.00 34.12 2.29
49 50 8.394121 GCACATAAGTCCAAATGTTTTGAAAAA 58.606 29.630 1.65 0.00 34.12 1.94
52 53 9.881529 CATAAGTCCAAATGTTTTGAAAAATGG 57.118 29.630 1.65 0.00 0.00 3.16
53 54 9.844257 ATAAGTCCAAATGTTTTGAAAAATGGA 57.156 25.926 10.01 10.01 33.35 3.41
54 55 7.790823 AGTCCAAATGTTTTGAAAAATGGAG 57.209 32.000 12.86 0.00 35.29 3.86
55 56 6.260714 AGTCCAAATGTTTTGAAAAATGGAGC 59.739 34.615 12.86 9.61 35.29 4.70
56 57 5.236047 TCCAAATGTTTTGAAAAATGGAGCG 59.764 36.000 10.01 0.00 31.75 5.03
57 58 5.007528 CCAAATGTTTTGAAAAATGGAGCGT 59.992 36.000 7.03 0.00 29.83 5.07
58 59 6.201806 CCAAATGTTTTGAAAAATGGAGCGTA 59.798 34.615 7.03 0.00 29.83 4.42
59 60 6.763303 AATGTTTTGAAAAATGGAGCGTAC 57.237 33.333 0.00 0.00 0.00 3.67
60 61 4.612943 TGTTTTGAAAAATGGAGCGTACC 58.387 39.130 0.00 0.00 0.00 3.34
61 62 4.339814 TGTTTTGAAAAATGGAGCGTACCT 59.660 37.500 0.00 0.00 0.00 3.08
62 63 4.759516 TTTGAAAAATGGAGCGTACCTC 57.240 40.909 3.50 3.50 39.98 3.85
63 64 3.410631 TGAAAAATGGAGCGTACCTCA 57.589 42.857 11.82 1.76 42.62 3.86
64 65 3.071479 TGAAAAATGGAGCGTACCTCAC 58.929 45.455 11.82 4.31 42.62 3.51
75 76 3.038352 CGTACCTCACGCATCAAATTG 57.962 47.619 0.00 0.00 45.03 2.32
76 77 2.415168 CGTACCTCACGCATCAAATTGT 59.585 45.455 0.00 0.00 45.03 2.71
77 78 3.483574 CGTACCTCACGCATCAAATTGTC 60.484 47.826 0.00 0.00 45.03 3.18
78 79 1.812571 ACCTCACGCATCAAATTGTCC 59.187 47.619 0.00 0.00 0.00 4.02
79 80 1.811965 CCTCACGCATCAAATTGTCCA 59.188 47.619 0.00 0.00 0.00 4.02
80 81 2.414559 CCTCACGCATCAAATTGTCCAC 60.415 50.000 0.00 0.00 0.00 4.02
81 82 1.539388 TCACGCATCAAATTGTCCACC 59.461 47.619 0.00 0.00 0.00 4.61
82 83 1.269174 CACGCATCAAATTGTCCACCA 59.731 47.619 0.00 0.00 0.00 4.17
83 84 1.269448 ACGCATCAAATTGTCCACCAC 59.731 47.619 0.00 0.00 0.00 4.16
84 85 1.402720 CGCATCAAATTGTCCACCACC 60.403 52.381 0.00 0.00 0.00 4.61
85 86 1.066929 GCATCAAATTGTCCACCACCC 60.067 52.381 0.00 0.00 0.00 4.61
86 87 1.550072 CATCAAATTGTCCACCACCCC 59.450 52.381 0.00 0.00 0.00 4.95
87 88 0.558220 TCAAATTGTCCACCACCCCA 59.442 50.000 0.00 0.00 0.00 4.96
88 89 1.062886 TCAAATTGTCCACCACCCCAA 60.063 47.619 0.00 0.00 0.00 4.12
89 90 1.977129 CAAATTGTCCACCACCCCAAT 59.023 47.619 0.00 0.00 0.00 3.16
90 91 2.371510 CAAATTGTCCACCACCCCAATT 59.628 45.455 0.00 0.00 38.72 2.32
91 92 2.414250 ATTGTCCACCACCCCAATTT 57.586 45.000 0.00 0.00 0.00 1.82
92 93 2.182516 TTGTCCACCACCCCAATTTT 57.817 45.000 0.00 0.00 0.00 1.82
93 94 2.182516 TGTCCACCACCCCAATTTTT 57.817 45.000 0.00 0.00 0.00 1.94
148 149 4.134623 TTTTTCGTGAGCGCAGGT 57.865 50.000 11.47 0.00 46.54 4.00
149 150 1.646540 TTTTTCGTGAGCGCAGGTG 59.353 52.632 11.47 0.00 39.88 4.00
150 151 2.387125 TTTTTCGTGAGCGCAGGTGC 62.387 55.000 11.47 0.00 39.88 5.01
151 152 4.600576 TTCGTGAGCGCAGGTGCA 62.601 61.111 11.47 0.00 39.88 4.57
154 155 2.435586 GTGAGCGCAGGTGCAGAT 60.436 61.111 11.47 0.00 39.88 2.90
155 156 2.435410 TGAGCGCAGGTGCAGATG 60.435 61.111 11.47 0.00 39.88 2.90
156 157 2.125391 GAGCGCAGGTGCAGATGA 60.125 61.111 11.47 0.00 39.88 2.92
157 158 2.125229 AGCGCAGGTGCAGATGAG 60.125 61.111 11.47 0.18 42.21 2.90
158 159 3.873883 GCGCAGGTGCAGATGAGC 61.874 66.667 0.30 10.34 42.21 4.26
159 160 2.125229 CGCAGGTGCAGATGAGCT 60.125 61.111 2.33 0.00 42.21 4.09
160 161 2.172372 CGCAGGTGCAGATGAGCTC 61.172 63.158 6.82 6.82 42.21 4.09
161 162 2.172372 GCAGGTGCAGATGAGCTCG 61.172 63.158 9.64 0.00 41.59 5.03
162 163 1.521010 CAGGTGCAGATGAGCTCGG 60.521 63.158 9.64 0.00 34.99 4.63
163 164 2.202987 GGTGCAGATGAGCTCGGG 60.203 66.667 9.64 0.00 34.99 5.14
164 165 2.581354 GTGCAGATGAGCTCGGGT 59.419 61.111 9.64 0.00 34.99 5.28
165 166 1.078848 GTGCAGATGAGCTCGGGTT 60.079 57.895 9.64 0.00 34.99 4.11
166 167 1.086634 GTGCAGATGAGCTCGGGTTC 61.087 60.000 9.64 3.57 34.99 3.62
167 168 1.219124 GCAGATGAGCTCGGGTTCA 59.781 57.895 3.64 3.64 37.12 3.18
168 169 0.809241 GCAGATGAGCTCGGGTTCAG 60.809 60.000 8.15 0.00 36.21 3.02
169 170 0.820226 CAGATGAGCTCGGGTTCAGA 59.180 55.000 8.15 0.00 36.21 3.27
170 171 1.411977 CAGATGAGCTCGGGTTCAGAT 59.588 52.381 8.15 0.00 36.21 2.90
171 172 2.114616 AGATGAGCTCGGGTTCAGATT 58.885 47.619 8.15 0.00 36.21 2.40
172 173 2.102252 AGATGAGCTCGGGTTCAGATTC 59.898 50.000 8.15 0.29 36.21 2.52
173 174 0.173481 TGAGCTCGGGTTCAGATTCG 59.827 55.000 9.64 0.00 0.00 3.34
174 175 0.456221 GAGCTCGGGTTCAGATTCGA 59.544 55.000 0.00 0.00 0.00 3.71
175 176 0.895530 AGCTCGGGTTCAGATTCGAA 59.104 50.000 0.00 0.00 0.00 3.71
176 177 1.482593 AGCTCGGGTTCAGATTCGAAT 59.517 47.619 11.20 11.20 0.00 3.34
177 178 2.093447 AGCTCGGGTTCAGATTCGAATT 60.093 45.455 12.81 0.00 0.00 2.17
178 179 2.678336 GCTCGGGTTCAGATTCGAATTT 59.322 45.455 12.81 3.29 0.00 1.82
179 180 3.127030 GCTCGGGTTCAGATTCGAATTTT 59.873 43.478 12.81 1.04 0.00 1.82
180 181 4.728021 GCTCGGGTTCAGATTCGAATTTTC 60.728 45.833 12.81 0.03 0.00 2.29
181 182 3.687698 TCGGGTTCAGATTCGAATTTTCC 59.312 43.478 12.81 10.36 0.00 3.13
182 183 3.485216 CGGGTTCAGATTCGAATTTTCCG 60.485 47.826 12.81 14.79 0.00 4.30
183 184 3.687698 GGGTTCAGATTCGAATTTTCCGA 59.312 43.478 12.81 2.32 0.00 4.55
184 185 4.436986 GGGTTCAGATTCGAATTTTCCGAC 60.437 45.833 12.81 6.89 35.61 4.79
185 186 4.436986 GGTTCAGATTCGAATTTTCCGACC 60.437 45.833 12.81 11.73 35.61 4.79
186 187 3.932822 TCAGATTCGAATTTTCCGACCA 58.067 40.909 12.81 0.00 35.61 4.02
187 188 4.320023 TCAGATTCGAATTTTCCGACCAA 58.680 39.130 12.81 0.00 35.61 3.67
188 189 4.153475 TCAGATTCGAATTTTCCGACCAAC 59.847 41.667 12.81 0.00 35.61 3.77
189 190 4.069304 AGATTCGAATTTTCCGACCAACA 58.931 39.130 12.81 0.00 35.61 3.33
190 191 3.612472 TTCGAATTTTCCGACCAACAC 57.388 42.857 0.00 0.00 35.61 3.32
191 192 2.562635 TCGAATTTTCCGACCAACACA 58.437 42.857 0.00 0.00 0.00 3.72
192 193 3.142951 TCGAATTTTCCGACCAACACAT 58.857 40.909 0.00 0.00 0.00 3.21
193 194 3.187637 TCGAATTTTCCGACCAACACATC 59.812 43.478 0.00 0.00 0.00 3.06
194 195 3.058570 CGAATTTTCCGACCAACACATCA 60.059 43.478 0.00 0.00 0.00 3.07
195 196 4.379394 CGAATTTTCCGACCAACACATCAT 60.379 41.667 0.00 0.00 0.00 2.45
196 197 5.467035 AATTTTCCGACCAACACATCATT 57.533 34.783 0.00 0.00 0.00 2.57
197 198 4.927978 TTTTCCGACCAACACATCATTT 57.072 36.364 0.00 0.00 0.00 2.32
198 199 4.927978 TTTCCGACCAACACATCATTTT 57.072 36.364 0.00 0.00 0.00 1.82
199 200 4.927978 TTCCGACCAACACATCATTTTT 57.072 36.364 0.00 0.00 0.00 1.94
200 201 4.497473 TCCGACCAACACATCATTTTTC 57.503 40.909 0.00 0.00 0.00 2.29
201 202 4.141287 TCCGACCAACACATCATTTTTCT 58.859 39.130 0.00 0.00 0.00 2.52
202 203 4.215399 TCCGACCAACACATCATTTTTCTC 59.785 41.667 0.00 0.00 0.00 2.87
203 204 4.023279 CCGACCAACACATCATTTTTCTCA 60.023 41.667 0.00 0.00 0.00 3.27
204 205 5.149273 CGACCAACACATCATTTTTCTCAG 58.851 41.667 0.00 0.00 0.00 3.35
205 206 5.458041 ACCAACACATCATTTTTCTCAGG 57.542 39.130 0.00 0.00 0.00 3.86
206 207 4.281688 ACCAACACATCATTTTTCTCAGGG 59.718 41.667 0.00 0.00 0.00 4.45
207 208 4.523943 CCAACACATCATTTTTCTCAGGGA 59.476 41.667 0.00 0.00 0.00 4.20
208 209 5.336213 CCAACACATCATTTTTCTCAGGGAG 60.336 44.000 0.00 0.00 0.00 4.30
209 210 5.246981 ACACATCATTTTTCTCAGGGAGA 57.753 39.130 0.00 0.00 36.86 3.71
210 211 5.634118 ACACATCATTTTTCTCAGGGAGAA 58.366 37.500 4.64 4.64 45.45 2.87
236 237 8.628630 AAAATCCTTGAAAGAAAAACCAAACA 57.371 26.923 0.00 0.00 0.00 2.83
237 238 8.628630 AAATCCTTGAAAGAAAAACCAAACAA 57.371 26.923 0.00 0.00 0.00 2.83
238 239 7.848223 ATCCTTGAAAGAAAAACCAAACAAG 57.152 32.000 0.00 0.00 35.01 3.16
239 240 6.998802 TCCTTGAAAGAAAAACCAAACAAGA 58.001 32.000 0.00 0.00 36.59 3.02
240 241 6.871492 TCCTTGAAAGAAAAACCAAACAAGAC 59.129 34.615 0.00 0.00 36.59 3.01
241 242 6.873605 CCTTGAAAGAAAAACCAAACAAGACT 59.126 34.615 0.00 0.00 36.59 3.24
242 243 7.063426 CCTTGAAAGAAAAACCAAACAAGACTC 59.937 37.037 0.00 0.00 36.59 3.36
243 244 7.227049 TGAAAGAAAAACCAAACAAGACTCT 57.773 32.000 0.00 0.00 0.00 3.24
244 245 7.312899 TGAAAGAAAAACCAAACAAGACTCTC 58.687 34.615 0.00 0.00 0.00 3.20
245 246 7.176690 TGAAAGAAAAACCAAACAAGACTCTCT 59.823 33.333 0.00 0.00 0.00 3.10
246 247 7.468141 AAGAAAAACCAAACAAGACTCTCTT 57.532 32.000 0.00 0.00 37.14 2.85
247 248 7.468141 AGAAAAACCAAACAAGACTCTCTTT 57.532 32.000 0.00 0.00 33.78 2.52
248 249 8.575649 AGAAAAACCAAACAAGACTCTCTTTA 57.424 30.769 0.00 0.00 33.78 1.85
249 250 8.459635 AGAAAAACCAAACAAGACTCTCTTTAC 58.540 33.333 0.00 0.00 33.78 2.01
250 251 7.939784 AAAACCAAACAAGACTCTCTTTACT 57.060 32.000 0.00 0.00 33.78 2.24
251 252 6.927294 AACCAAACAAGACTCTCTTTACTG 57.073 37.500 0.00 0.00 33.78 2.74
252 253 6.235231 ACCAAACAAGACTCTCTTTACTGA 57.765 37.500 0.00 0.00 33.78 3.41
253 254 6.284459 ACCAAACAAGACTCTCTTTACTGAG 58.716 40.000 0.00 0.00 33.78 3.35
254 255 5.178438 CCAAACAAGACTCTCTTTACTGAGC 59.822 44.000 0.00 0.00 33.78 4.26
255 256 4.167554 ACAAGACTCTCTTTACTGAGCG 57.832 45.455 0.00 0.00 33.78 5.03
256 257 3.821600 ACAAGACTCTCTTTACTGAGCGA 59.178 43.478 0.00 0.00 33.78 4.93
257 258 4.083003 ACAAGACTCTCTTTACTGAGCGAG 60.083 45.833 0.00 0.00 33.78 5.03
258 259 3.945346 AGACTCTCTTTACTGAGCGAGA 58.055 45.455 0.00 0.00 33.72 4.04
259 260 3.687698 AGACTCTCTTTACTGAGCGAGAC 59.312 47.826 0.00 0.00 33.72 3.36
260 261 3.681593 ACTCTCTTTACTGAGCGAGACT 58.318 45.455 0.00 0.00 33.72 3.24
261 262 4.076394 ACTCTCTTTACTGAGCGAGACTT 58.924 43.478 0.00 0.00 33.72 3.01
262 263 4.155280 ACTCTCTTTACTGAGCGAGACTTC 59.845 45.833 0.00 0.00 33.72 3.01
263 264 4.072839 TCTCTTTACTGAGCGAGACTTCA 58.927 43.478 0.00 0.00 34.29 3.02
264 265 4.702612 TCTCTTTACTGAGCGAGACTTCAT 59.297 41.667 0.00 0.00 34.29 2.57
265 266 4.987832 TCTTTACTGAGCGAGACTTCATC 58.012 43.478 0.00 0.00 0.00 2.92
266 267 4.702612 TCTTTACTGAGCGAGACTTCATCT 59.297 41.667 0.00 0.00 41.91 2.90
267 268 5.880887 TCTTTACTGAGCGAGACTTCATCTA 59.119 40.000 0.00 0.00 38.00 1.98
268 269 6.544197 TCTTTACTGAGCGAGACTTCATCTAT 59.456 38.462 0.00 0.00 38.00 1.98
269 270 7.715686 TCTTTACTGAGCGAGACTTCATCTATA 59.284 37.037 0.00 0.00 38.00 1.31
270 271 7.987750 TTACTGAGCGAGACTTCATCTATAT 57.012 36.000 0.00 0.00 38.00 0.86
271 272 6.494893 ACTGAGCGAGACTTCATCTATATC 57.505 41.667 0.00 0.00 38.00 1.63
272 273 5.414454 ACTGAGCGAGACTTCATCTATATCC 59.586 44.000 0.00 0.00 38.00 2.59
273 274 4.702612 TGAGCGAGACTTCATCTATATCCC 59.297 45.833 0.00 0.00 38.00 3.85
274 275 4.929479 AGCGAGACTTCATCTATATCCCT 58.071 43.478 0.00 0.00 38.00 4.20
275 276 6.068461 AGCGAGACTTCATCTATATCCCTA 57.932 41.667 0.00 0.00 38.00 3.53
276 277 6.486056 AGCGAGACTTCATCTATATCCCTAA 58.514 40.000 0.00 0.00 38.00 2.69
277 278 6.948886 AGCGAGACTTCATCTATATCCCTAAA 59.051 38.462 0.00 0.00 38.00 1.85
278 279 7.451877 AGCGAGACTTCATCTATATCCCTAAAA 59.548 37.037 0.00 0.00 38.00 1.52
279 280 7.757624 GCGAGACTTCATCTATATCCCTAAAAG 59.242 40.741 0.00 0.00 38.00 2.27
280 281 8.798402 CGAGACTTCATCTATATCCCTAAAAGT 58.202 37.037 0.00 0.00 38.00 2.66
281 282 9.921637 GAGACTTCATCTATATCCCTAAAAGTG 57.078 37.037 0.00 0.00 38.00 3.16
282 283 8.875168 AGACTTCATCTATATCCCTAAAAGTGG 58.125 37.037 0.00 0.00 35.15 4.00
283 284 8.798975 ACTTCATCTATATCCCTAAAAGTGGA 57.201 34.615 0.00 0.00 34.54 4.02
284 285 9.398921 ACTTCATCTATATCCCTAAAAGTGGAT 57.601 33.333 0.00 0.00 43.68 3.41
288 289 9.236006 CATCTATATCCCTAAAAGTGGATTTGG 57.764 37.037 0.00 0.00 41.56 3.28
289 290 8.575736 TCTATATCCCTAAAAGTGGATTTGGA 57.424 34.615 0.00 0.00 41.56 3.53
290 291 9.182642 TCTATATCCCTAAAAGTGGATTTGGAT 57.817 33.333 0.00 0.00 41.56 3.41
291 292 9.813826 CTATATCCCTAAAAGTGGATTTGGATT 57.186 33.333 0.00 0.00 41.56 3.01
292 293 8.712228 ATATCCCTAAAAGTGGATTTGGATTC 57.288 34.615 0.00 0.00 41.56 2.52
293 294 5.269189 TCCCTAAAAGTGGATTTGGATTCC 58.731 41.667 0.00 0.00 0.00 3.01
294 295 4.405680 CCCTAAAAGTGGATTTGGATTCCC 59.594 45.833 0.00 0.00 31.87 3.97
295 296 5.022787 CCTAAAAGTGGATTTGGATTCCCA 58.977 41.667 0.00 0.00 41.64 4.37
296 297 5.662657 CCTAAAAGTGGATTTGGATTCCCAT 59.337 40.000 0.00 0.00 43.12 4.00
308 309 2.686915 GGATTCCCATTGAACTCAGCAG 59.313 50.000 0.00 0.00 35.31 4.24
310 311 0.674581 TCCCATTGAACTCAGCAGCG 60.675 55.000 0.00 0.00 0.00 5.18
318 319 3.254060 TGAACTCAGCAGCGTAAGATTC 58.746 45.455 0.00 0.00 43.02 2.52
333 334 6.241385 CGTAAGATTCGTGGAAATGAACTTC 58.759 40.000 0.00 0.00 43.02 3.01
339 340 2.096417 CGTGGAAATGAACTTCCGTGAC 60.096 50.000 0.00 0.00 46.85 3.67
349 350 5.795972 TGAACTTCCGTGACCATACATTAA 58.204 37.500 0.00 0.00 0.00 1.40
357 358 7.531716 TCCGTGACCATACATTAATTTTTGTC 58.468 34.615 0.00 0.00 0.00 3.18
365 366 8.846211 CCATACATTAATTTTTGTCGATACCCT 58.154 33.333 0.00 0.00 0.00 4.34
375 376 5.449107 TTGTCGATACCCTTATGCTAGAC 57.551 43.478 0.00 0.00 0.00 2.59
376 377 4.466827 TGTCGATACCCTTATGCTAGACA 58.533 43.478 0.00 0.00 34.29 3.41
399 400 6.876789 ACAAATGTAATGTCATCAACCGAGTA 59.123 34.615 0.00 0.00 0.00 2.59
401 402 6.903883 ATGTAATGTCATCAACCGAGTAAC 57.096 37.500 0.00 0.00 0.00 2.50
402 403 5.785243 TGTAATGTCATCAACCGAGTAACA 58.215 37.500 0.00 0.00 0.00 2.41
403 404 6.224584 TGTAATGTCATCAACCGAGTAACAA 58.775 36.000 0.00 0.00 0.00 2.83
404 405 6.876789 TGTAATGTCATCAACCGAGTAACAAT 59.123 34.615 0.00 0.00 0.00 2.71
405 406 5.801350 ATGTCATCAACCGAGTAACAATG 57.199 39.130 0.00 0.00 0.00 2.82
410 411 6.577427 GTCATCAACCGAGTAACAATGAAAAC 59.423 38.462 0.00 0.00 0.00 2.43
411 412 6.261158 TCATCAACCGAGTAACAATGAAAACA 59.739 34.615 0.00 0.00 0.00 2.83
413 414 6.853720 TCAACCGAGTAACAATGAAAACAAA 58.146 32.000 0.00 0.00 0.00 2.83
414 415 7.313646 TCAACCGAGTAACAATGAAAACAAAA 58.686 30.769 0.00 0.00 0.00 2.44
415 416 7.813148 TCAACCGAGTAACAATGAAAACAAAAA 59.187 29.630 0.00 0.00 0.00 1.94
445 446 4.894784 ACGATATTCTCAGTGTTTGTGGT 58.105 39.130 0.00 0.00 0.00 4.16
487 488 5.461032 TCTTTTTAAACGCCAATCACCAT 57.539 34.783 0.00 0.00 0.00 3.55
500 501 5.360591 CCAATCACCATACTAGTTCTCACC 58.639 45.833 0.00 0.00 0.00 4.02
504 505 3.022406 ACCATACTAGTTCTCACCGACC 58.978 50.000 0.00 0.00 0.00 4.79
509 510 1.132643 CTAGTTCTCACCGACCCTTCG 59.867 57.143 0.00 0.00 45.44 3.79
520 521 0.109226 GACCCTTCGTCCAAGACTCG 60.109 60.000 0.00 0.00 35.23 4.18
542 543 5.090757 CGCATTATGGGATCAATCAAATCG 58.909 41.667 2.95 0.00 31.21 3.34
547 548 7.637631 TTATGGGATCAATCAAATCGTCAAA 57.362 32.000 0.00 0.00 0.00 2.69
549 550 6.338214 TGGGATCAATCAAATCGTCAAAAA 57.662 33.333 0.00 0.00 0.00 1.94
580 581 1.843421 CACCACCCCTCCTTGTCAA 59.157 57.895 0.00 0.00 0.00 3.18
581 582 0.405585 CACCACCCCTCCTTGTCAAT 59.594 55.000 0.00 0.00 0.00 2.57
582 583 1.158007 ACCACCCCTCCTTGTCAATT 58.842 50.000 0.00 0.00 0.00 2.32
583 584 1.203050 ACCACCCCTCCTTGTCAATTG 60.203 52.381 0.00 0.00 0.00 2.32
584 585 1.203050 CCACCCCTCCTTGTCAATTGT 60.203 52.381 5.13 0.00 0.00 2.71
585 586 2.162681 CACCCCTCCTTGTCAATTGTC 58.837 52.381 5.13 0.00 0.00 3.18
586 587 1.780309 ACCCCTCCTTGTCAATTGTCA 59.220 47.619 5.13 2.96 0.00 3.58
593 594 3.820467 TCCTTGTCAATTGTCATCACCAC 59.180 43.478 6.21 0.00 0.00 4.16
623 624 3.452627 AGACTAGTTGTGATCCATGGACC 59.547 47.826 18.99 8.28 0.00 4.46
653 662 1.996748 TTACCATCACCGGTCCCCC 60.997 63.158 2.59 0.00 40.67 5.40
654 663 2.767424 TTACCATCACCGGTCCCCCA 62.767 60.000 2.59 0.00 40.67 4.96
664 673 1.441695 CGGTCCCCCAAATATACCCT 58.558 55.000 0.00 0.00 0.00 4.34
670 679 5.103387 GGTCCCCCAAATATACCCTTAGTTT 60.103 44.000 0.00 0.00 0.00 2.66
674 683 6.549736 CCCCCAAATATACCCTTAGTTTGAAG 59.450 42.308 0.00 0.00 32.93 3.02
685 694 8.073467 ACCCTTAGTTTGAAGTTTGAAAATCA 57.927 30.769 0.00 0.00 0.00 2.57
705 714 4.526970 TCATAGAGGATTCTTTGCCAACC 58.473 43.478 0.00 0.00 33.82 3.77
712 721 3.366374 GGATTCTTTGCCAACCGAAAGAG 60.366 47.826 0.00 0.00 38.94 2.85
718 727 1.885887 TGCCAACCGAAAGAGGATTTG 59.114 47.619 0.00 0.00 34.73 2.32
724 1397 2.290323 ACCGAAAGAGGATTTGGACCTG 60.290 50.000 0.00 0.00 37.93 4.00
757 1430 1.141053 GTAGATCCGTTGGGCCTGATT 59.859 52.381 4.53 0.00 0.00 2.57
762 1435 0.684153 CCGTTGGGCCTGATTTGGAT 60.684 55.000 4.53 0.00 0.00 3.41
773 1446 3.319972 CCTGATTTGGATCGGATTGCATT 59.680 43.478 0.00 0.00 40.48 3.56
783 1456 4.191033 TCGGATTGCATTTTTGCATTCT 57.809 36.364 17.33 1.80 44.94 2.40
784 1457 4.567971 TCGGATTGCATTTTTGCATTCTT 58.432 34.783 17.33 0.00 44.94 2.52
792 1465 5.821470 TGCATTTTTGCATTCTTTCTTTGGA 59.179 32.000 0.00 0.00 40.23 3.53
795 1468 7.570161 CATTTTTGCATTCTTTCTTTGGAGTC 58.430 34.615 0.00 0.00 0.00 3.36
816 1489 3.831911 TCCCTGCTTGTAAAAATCAAGGG 59.168 43.478 7.58 0.00 41.50 3.95
818 1491 3.831911 CCTGCTTGTAAAAATCAAGGGGA 59.168 43.478 7.58 0.00 41.50 4.81
863 1536 0.967380 GGCCCTGCTGTAAACTGCAT 60.967 55.000 13.97 0.00 46.92 3.96
873 1546 3.183754 TGTAAACTGCATCGTATCACCG 58.816 45.455 0.00 0.00 0.00 4.94
874 1547 2.665649 AAACTGCATCGTATCACCGA 57.334 45.000 0.00 0.00 41.73 4.69
875 1548 1.922570 AACTGCATCGTATCACCGAC 58.077 50.000 0.00 0.00 40.08 4.79
876 1549 0.815095 ACTGCATCGTATCACCGACA 59.185 50.000 0.00 0.00 40.08 4.35
877 1550 1.200483 CTGCATCGTATCACCGACAC 58.800 55.000 0.00 0.00 40.08 3.67
878 1551 0.179121 TGCATCGTATCACCGACACC 60.179 55.000 0.00 0.00 40.08 4.16
926 1604 2.125633 GGGACGCTTCTCCCGTTC 60.126 66.667 0.00 0.00 40.86 3.95
931 1609 0.666577 ACGCTTCTCCCGTTCGAAAG 60.667 55.000 0.00 0.51 34.96 2.62
1047 1731 4.301027 CCGCCGGAGCACCCTATC 62.301 72.222 5.05 0.00 39.83 2.08
2205 4055 2.240921 TCCTTTGGTATGCAGCATGGTA 59.759 45.455 18.81 0.66 35.86 3.25
2308 4173 3.593328 TCCCTGAGAGGATTGGATTGTTT 59.407 43.478 0.00 0.00 37.67 2.83
2311 4176 5.951747 CCCTGAGAGGATTGGATTGTTTTAA 59.048 40.000 0.00 0.00 37.67 1.52
3407 5974 2.049802 CCGTTACGCCACGTCAGT 60.050 61.111 0.00 0.00 41.54 3.41
3576 6143 3.068024 GTGGTTTTCTGCAATTCACTCCA 59.932 43.478 0.00 0.00 0.00 3.86
3670 6245 7.760794 ACATTACTACATGGATGCAAAATTGTG 59.239 33.333 0.00 0.00 0.00 3.33
3803 6475 7.130681 TGTGTTCAAATATTTGGAGGGTTTT 57.869 32.000 24.40 0.00 38.66 2.43
3804 6476 7.569240 TGTGTTCAAATATTTGGAGGGTTTTT 58.431 30.769 24.40 0.00 38.66 1.94
4046 7368 1.882625 GGTGCGCTACATCGATGCA 60.883 57.895 25.11 14.04 0.00 3.96
4068 7390 4.210537 CACGGGTGTAGTGAAAAGTTAGTG 59.789 45.833 0.00 0.00 41.83 2.74
4106 7428 2.069273 CTCAACGAGTGCAAAGGGTAG 58.931 52.381 0.00 0.00 0.00 3.18
4107 7429 0.517316 CAACGAGTGCAAAGGGTAGC 59.483 55.000 0.00 0.00 0.00 3.58
4244 7589 0.036875 GGACAGAAAGTGGAGGTGGG 59.963 60.000 0.00 0.00 0.00 4.61
4282 7636 4.309099 GTTGTGATACACGGGACAACTAA 58.691 43.478 11.65 0.00 43.12 2.24
4297 7651 5.920840 GGACAACTAAAAACAAGAATGGAGC 59.079 40.000 0.00 0.00 0.00 4.70
4298 7652 5.519722 ACAACTAAAAACAAGAATGGAGCG 58.480 37.500 0.00 0.00 0.00 5.03
4322 7695 4.194640 GCATCTTCATCAACAAGAGCCTA 58.805 43.478 0.00 0.00 33.36 3.93
4343 7716 2.621070 AGGTGTGGAGTGGTAGATGTT 58.379 47.619 0.00 0.00 0.00 2.71
4373 7747 2.617658 GGGGACCGGATTATCCTAGTT 58.382 52.381 9.46 0.00 40.86 2.24
4835 8229 3.933886 AGCAGGAATCAAGGAGAGGATA 58.066 45.455 0.00 0.00 0.00 2.59
4955 8350 3.830121 AGCCAGATTGATTTCATCCTCC 58.170 45.455 0.00 0.00 0.00 4.30
4979 8374 0.037790 AAGAGAAGACAGGCGTGCTC 60.038 55.000 6.26 5.06 0.00 4.26
5052 8454 4.771684 CGGCTGATTTCCGCTTTG 57.228 55.556 0.00 0.00 40.46 2.77
5053 8455 1.875963 CGGCTGATTTCCGCTTTGT 59.124 52.632 0.00 0.00 40.46 2.83
5087 8490 1.331138 CGGGATAAACGCGCCAAAATA 59.669 47.619 5.73 0.00 46.65 1.40
5190 8619 2.553028 GGAAGGAGGTGATGCAGACAAA 60.553 50.000 0.00 0.00 0.00 2.83
5265 8709 2.092914 GGTGACCATGGGAAGTAGAAGG 60.093 54.545 18.09 0.00 0.00 3.46
5441 8995 0.535102 CGTGAGTGAAGCAAGGGGTT 60.535 55.000 0.00 0.00 37.46 4.11
5480 9044 5.258841 TCTACCGGTCTTTAGACATGAAGA 58.741 41.667 12.40 0.00 46.47 2.87
5517 9082 9.707957 ATCTATAAGATTACCAAGATCCGAGAT 57.292 33.333 0.00 0.00 28.69 2.75
5607 9173 5.627182 ACAAGGAGATCAAGCATAGATGT 57.373 39.130 0.00 0.00 0.00 3.06
5649 9217 4.831674 TTCAATGGAGAGAATGAGAGCA 57.168 40.909 0.00 0.00 0.00 4.26
5665 9233 1.872313 GAGCACTATCATTGAGCTGGC 59.128 52.381 0.00 0.00 35.36 4.85
5721 9291 0.528684 CGAATTCAGGAGTCCGAGGC 60.529 60.000 2.76 0.00 0.00 4.70
5727 9297 3.151022 GGAGTCCGAGGCCAGGAG 61.151 72.222 18.89 0.13 38.65 3.69
5869 9449 1.666189 GGGCTAACAAGATGCTCGAAC 59.334 52.381 0.00 0.00 0.00 3.95
6049 9632 1.304381 TGGTTTCATGCCTGGGAGC 60.304 57.895 0.00 0.00 0.00 4.70
6182 9771 2.621147 CCATGGAATGTCATGTGGTGGA 60.621 50.000 5.56 0.00 44.81 4.02
6342 9962 5.242838 CAGCCCTTATCTTTTTGTTGTGGTA 59.757 40.000 0.00 0.00 0.00 3.25
6439 10076 6.318900 GTCAGATGGGGGTTAATAGAAAGTTG 59.681 42.308 0.00 0.00 0.00 3.16
6472 10111 6.544564 AGACAAACTTTGGAATCGAAAGGTTA 59.455 34.615 18.18 0.00 38.09 2.85
6527 10168 4.396166 GGTACGGTTTCAGTACTACTAGCA 59.604 45.833 0.00 0.00 42.81 3.49
6534 10178 3.276857 TCAGTACTACTAGCAACGAGGG 58.723 50.000 0.00 0.00 0.00 4.30
6619 10270 0.321919 TGCTGCAGAAGGATGGTGAC 60.322 55.000 20.43 0.00 0.00 3.67
6704 10364 3.809832 CGTTCTCCATGACAAGAAAGTGT 59.190 43.478 0.00 0.00 33.53 3.55
6720 10380 7.781548 AGAAAGTGTCGTAAAAGCTAAAAGA 57.218 32.000 0.00 0.00 0.00 2.52
6722 10382 5.571778 AGTGTCGTAAAAGCTAAAAGACG 57.428 39.130 0.00 0.00 0.00 4.18
6748 10408 0.968901 ATAGGACGGCAGTTCGACCA 60.969 55.000 8.22 0.00 44.82 4.02
6824 10485 4.036971 AGTTTGGTGTAGCAAAATACGCAA 59.963 37.500 10.42 0.00 37.80 4.85
7036 10722 4.593206 ACCAAACTTGACATGAGAGGAGTA 59.407 41.667 0.00 0.00 0.00 2.59
7037 10723 5.071788 ACCAAACTTGACATGAGAGGAGTAA 59.928 40.000 0.00 0.00 0.00 2.24
7039 10725 6.148480 CCAAACTTGACATGAGAGGAGTAAAG 59.852 42.308 0.00 0.00 31.38 1.85
7040 10726 6.426646 AACTTGACATGAGAGGAGTAAAGT 57.573 37.500 0.00 0.00 38.33 2.66
7042 10728 7.540474 ACTTGACATGAGAGGAGTAAAGTTA 57.460 36.000 0.00 0.00 34.11 2.24
7043 10729 7.607250 ACTTGACATGAGAGGAGTAAAGTTAG 58.393 38.462 0.00 0.00 34.11 2.34
7044 10730 5.967088 TGACATGAGAGGAGTAAAGTTAGC 58.033 41.667 0.00 0.00 0.00 3.09
7045 10731 5.717178 TGACATGAGAGGAGTAAAGTTAGCT 59.283 40.000 0.00 0.00 0.00 3.32
7046 10732 6.890268 TGACATGAGAGGAGTAAAGTTAGCTA 59.110 38.462 0.00 0.00 0.00 3.32
7047 10733 7.561722 TGACATGAGAGGAGTAAAGTTAGCTAT 59.438 37.037 0.00 0.00 0.00 2.97
7048 10734 7.947282 ACATGAGAGGAGTAAAGTTAGCTATC 58.053 38.462 0.00 0.00 0.00 2.08
7049 10735 6.963083 TGAGAGGAGTAAAGTTAGCTATCC 57.037 41.667 0.00 0.00 0.00 2.59
7050 10736 6.432581 TGAGAGGAGTAAAGTTAGCTATCCA 58.567 40.000 9.41 0.00 0.00 3.41
7051 10737 6.321690 TGAGAGGAGTAAAGTTAGCTATCCAC 59.678 42.308 9.41 3.95 0.00 4.02
7052 10738 5.599242 AGAGGAGTAAAGTTAGCTATCCACC 59.401 44.000 9.41 2.23 0.00 4.61
7053 10739 5.530243 AGGAGTAAAGTTAGCTATCCACCT 58.470 41.667 9.41 1.09 0.00 4.00
7054 10740 5.364157 AGGAGTAAAGTTAGCTATCCACCTG 59.636 44.000 9.41 0.00 0.00 4.00
7055 10741 5.024785 AGTAAAGTTAGCTATCCACCTGC 57.975 43.478 0.00 0.00 0.00 4.85
7056 10742 3.283259 AAAGTTAGCTATCCACCTGCC 57.717 47.619 0.00 0.00 0.00 4.85
7057 10743 1.879575 AGTTAGCTATCCACCTGCCA 58.120 50.000 0.00 0.00 0.00 4.92
7058 10744 1.765314 AGTTAGCTATCCACCTGCCAG 59.235 52.381 0.00 0.00 0.00 4.85
7059 10745 1.762957 GTTAGCTATCCACCTGCCAGA 59.237 52.381 0.00 0.00 0.00 3.86
7060 10746 1.709578 TAGCTATCCACCTGCCAGAG 58.290 55.000 0.00 0.00 0.00 3.35
7061 10747 1.227793 GCTATCCACCTGCCAGAGC 60.228 63.158 0.00 0.00 40.48 4.09
7062 10748 1.449353 CTATCCACCTGCCAGAGCC 59.551 63.158 0.00 0.00 38.69 4.70
7063 10749 1.306911 TATCCACCTGCCAGAGCCA 60.307 57.895 0.00 0.00 38.69 4.75
7064 10750 0.695462 TATCCACCTGCCAGAGCCAT 60.695 55.000 0.00 0.00 38.69 4.40
7065 10751 2.280404 ATCCACCTGCCAGAGCCATG 62.280 60.000 0.00 0.00 38.69 3.66
7066 10752 2.672908 CACCTGCCAGAGCCATGA 59.327 61.111 0.00 0.00 38.69 3.07
7067 10753 1.451567 CACCTGCCAGAGCCATGAG 60.452 63.158 0.00 0.00 38.69 2.90
7068 10754 1.922369 ACCTGCCAGAGCCATGAGT 60.922 57.895 0.00 0.00 38.69 3.41
7069 10755 1.302285 CCTGCCAGAGCCATGAGTT 59.698 57.895 0.00 0.00 38.69 3.01
7070 10756 1.030488 CCTGCCAGAGCCATGAGTTG 61.030 60.000 0.00 0.00 38.69 3.16
7144 10835 3.715315 AGGGGTAAAGTTAGCTATCCACC 59.285 47.826 0.00 2.13 0.00 4.61
7184 10875 3.756963 GGTTTCGAGAGCTTATGGGTTTT 59.243 43.478 0.00 0.00 0.00 2.43
7406 11098 6.626623 GCATAATTTGATGCCAGTGAGAACTT 60.627 38.462 2.27 0.00 45.41 2.66
7409 11101 3.213206 TGATGCCAGTGAGAACTTTGT 57.787 42.857 0.00 0.00 0.00 2.83
7423 11144 5.825507 AGAACTTTGTGTCATTCAAGCTTC 58.174 37.500 0.00 0.00 0.00 3.86
7458 11182 6.718522 TTGGATAGTACACACGATTATCCA 57.281 37.500 11.70 11.70 44.79 3.41
7520 11245 7.928706 GGATGCAAAGTATATGTGTTCTCTAGT 59.071 37.037 0.00 0.00 0.00 2.57
7586 11528 9.230122 CCAAATAGGCCACATTCTTTTAAAAAT 57.770 29.630 5.01 0.00 0.00 1.82
7590 11532 5.934043 AGGCCACATTCTTTTAAAAATCAGC 59.066 36.000 5.01 0.00 0.00 4.26
7686 11641 3.217681 ACCCAGTTACGGATGTGTTTT 57.782 42.857 0.00 0.00 0.00 2.43
7687 11642 3.558033 ACCCAGTTACGGATGTGTTTTT 58.442 40.909 0.00 0.00 0.00 1.94
7735 11691 7.095270 TCACTTTTTCTCTTAGATCGTAACCC 58.905 38.462 0.00 0.00 0.00 4.11
7865 11823 2.166829 AGCCAATTAAACATGCACCGA 58.833 42.857 0.00 0.00 0.00 4.69
8162 12259 6.068010 TGTCCATACAAACACTTGAATTCCT 58.932 36.000 2.27 0.00 36.33 3.36
8258 12355 0.606673 GGTCCTGAGGGCACAGAAAC 60.607 60.000 5.06 9.13 39.94 2.78
8289 12386 3.194861 TGTCCTCATAACAGCATTACGC 58.805 45.455 0.00 0.00 42.91 4.42
8425 12522 7.547019 TCACTGCTTTAGATGAACTGTTGATAG 59.453 37.037 0.00 0.00 0.00 2.08
8451 12581 2.494073 GAGAGATCGTGTCTTGAGGGTT 59.506 50.000 0.00 0.00 37.29 4.11
8514 12650 0.392336 GCTGGTGGGAAATGTGCAAA 59.608 50.000 0.00 0.00 0.00 3.68
8698 12918 9.453572 ACATCATCAGTAGTTTCATGTATGTTT 57.546 29.630 0.00 0.00 0.00 2.83
8710 12930 5.577835 TCATGTATGTTTAATTGAAGCGGC 58.422 37.500 0.00 0.00 0.00 6.53
8713 12933 5.157781 TGTATGTTTAATTGAAGCGGCAAC 58.842 37.500 1.45 0.00 0.00 4.17
8731 12951 3.679980 GCAACGACTGTAACATCATCAGT 59.320 43.478 0.00 0.00 43.72 3.41
8732 12952 4.862574 GCAACGACTGTAACATCATCAGTA 59.137 41.667 0.00 0.00 41.58 2.74
8733 12953 5.220228 GCAACGACTGTAACATCATCAGTAC 60.220 44.000 0.00 0.00 41.58 2.73
8734 12954 5.899120 ACGACTGTAACATCATCAGTACT 57.101 39.130 0.00 0.00 41.58 2.73
8735 12955 5.881447 ACGACTGTAACATCATCAGTACTC 58.119 41.667 0.00 0.00 41.58 2.59
8777 12997 4.223255 GGTAGGAGACTAAGCCTTGAGTTT 59.777 45.833 0.00 0.00 46.54 2.66
8831 13051 4.142227 CCGTACCTAGAAACTGTACATGCT 60.142 45.833 0.00 0.00 35.67 3.79
8832 13052 5.035443 CGTACCTAGAAACTGTACATGCTC 58.965 45.833 0.00 0.00 35.67 4.26
8836 13066 5.221641 ACCTAGAAACTGTACATGCTCACAA 60.222 40.000 0.00 0.00 0.00 3.33
8842 13072 2.810274 CTGTACATGCTCACAAGTGCTT 59.190 45.455 0.00 0.00 32.25 3.91
8858 13088 8.075574 CACAAGTGCTTCATATTTGTGTCTTTA 58.924 33.333 7.33 0.00 42.07 1.85
8877 13107 8.978539 TGTCTTTATCTAATCGATTATGTGCAC 58.021 33.333 17.84 10.75 33.48 4.57
8883 13113 7.015226 TCTAATCGATTATGTGCACCTTTTG 57.985 36.000 17.84 2.60 0.00 2.44
8937 13168 3.747099 GCATTTATGTGCGAGTGAGTT 57.253 42.857 0.00 0.00 35.10 3.01
8938 13169 4.083581 GCATTTATGTGCGAGTGAGTTT 57.916 40.909 0.00 0.00 35.10 2.66
8939 13170 3.848019 GCATTTATGTGCGAGTGAGTTTG 59.152 43.478 0.00 0.00 35.10 2.93
8941 13172 5.688823 CATTTATGTGCGAGTGAGTTTGAA 58.311 37.500 0.00 0.00 0.00 2.69
8942 13173 4.990543 TTATGTGCGAGTGAGTTTGAAG 57.009 40.909 0.00 0.00 0.00 3.02
8943 13174 2.595124 TGTGCGAGTGAGTTTGAAGA 57.405 45.000 0.00 0.00 0.00 2.87
8944 13175 3.111853 TGTGCGAGTGAGTTTGAAGAT 57.888 42.857 0.00 0.00 0.00 2.40
8945 13176 3.059884 TGTGCGAGTGAGTTTGAAGATC 58.940 45.455 0.00 0.00 0.00 2.75
8951 13182 7.383572 GTGCGAGTGAGTTTGAAGATCATATAT 59.616 37.037 0.00 0.00 0.00 0.86
8973 13204 6.942532 ATATAAATGCGTGTGGATGTTCTT 57.057 33.333 0.00 0.00 0.00 2.52
8978 13209 2.032799 TGCGTGTGGATGTTCTTTGTTC 59.967 45.455 0.00 0.00 0.00 3.18
8979 13210 2.032799 GCGTGTGGATGTTCTTTGTTCA 59.967 45.455 0.00 0.00 0.00 3.18
8980 13211 3.304659 GCGTGTGGATGTTCTTTGTTCAT 60.305 43.478 0.00 0.00 0.00 2.57
8981 13212 4.221342 CGTGTGGATGTTCTTTGTTCATG 58.779 43.478 0.00 0.00 0.00 3.07
8983 13214 5.335113 CGTGTGGATGTTCTTTGTTCATGAT 60.335 40.000 0.00 0.00 0.00 2.45
8984 13215 6.128309 CGTGTGGATGTTCTTTGTTCATGATA 60.128 38.462 0.00 0.00 0.00 2.15
8986 13217 7.752239 GTGTGGATGTTCTTTGTTCATGATAAG 59.248 37.037 0.00 1.41 0.00 1.73
8987 13218 6.749118 GTGGATGTTCTTTGTTCATGATAAGC 59.251 38.462 0.00 0.00 0.00 3.09
8988 13219 6.660521 TGGATGTTCTTTGTTCATGATAAGCT 59.339 34.615 0.00 0.00 0.00 3.74
8989 13220 7.177216 TGGATGTTCTTTGTTCATGATAAGCTT 59.823 33.333 3.48 3.48 0.00 3.74
8990 13221 8.031277 GGATGTTCTTTGTTCATGATAAGCTTT 58.969 33.333 3.20 0.00 0.00 3.51
8992 13223 9.768662 ATGTTCTTTGTTCATGATAAGCTTTTT 57.231 25.926 3.20 0.00 0.00 1.94
9011 13242 2.119886 TTTTTGGCGGGGACTGTTG 58.880 52.632 0.00 0.00 36.83 3.33
9012 13243 2.022240 TTTTTGGCGGGGACTGTTGC 62.022 55.000 0.00 0.00 36.83 4.17
9013 13244 3.723097 TTTGGCGGGGACTGTTGCA 62.723 57.895 0.00 0.00 36.83 4.08
9014 13245 2.992817 TTTGGCGGGGACTGTTGCAT 62.993 55.000 0.00 0.00 36.83 3.96
9015 13246 2.130821 TTGGCGGGGACTGTTGCATA 62.131 55.000 0.00 0.00 36.83 3.14
9017 13248 0.751643 GGCGGGGACTGTTGCATAAT 60.752 55.000 0.00 0.00 36.83 1.28
9018 13249 1.476110 GGCGGGGACTGTTGCATAATA 60.476 52.381 0.00 0.00 36.83 0.98
9019 13250 2.294074 GCGGGGACTGTTGCATAATAA 58.706 47.619 0.00 0.00 36.83 1.40
9020 13251 2.290641 GCGGGGACTGTTGCATAATAAG 59.709 50.000 0.00 0.00 36.83 1.73
9021 13252 2.290641 CGGGGACTGTTGCATAATAAGC 59.709 50.000 0.00 0.00 0.00 3.09
9022 13253 3.287222 GGGGACTGTTGCATAATAAGCA 58.713 45.455 0.00 0.00 40.85 3.91
9041 13333 9.691362 AATAAGCAAACATGGTAACTTTTGTAG 57.309 29.630 3.73 0.00 35.36 2.74
9042 13334 5.528870 AGCAAACATGGTAACTTTTGTAGC 58.471 37.500 0.00 0.00 35.36 3.58
9044 13336 5.508994 GCAAACATGGTAACTTTTGTAGCCT 60.509 40.000 0.00 0.00 35.36 4.58
9045 13337 6.512297 CAAACATGGTAACTTTTGTAGCCTT 58.488 36.000 0.00 0.00 37.61 4.35
9048 13340 7.119709 ACATGGTAACTTTTGTAGCCTTTTT 57.880 32.000 0.00 0.00 37.61 1.94
9071 13363 8.964420 TTTTAATGTTAAAGTCATAGCTGTGC 57.036 30.769 5.44 1.27 34.45 4.57
9072 13364 7.921786 TTAATGTTAAAGTCATAGCTGTGCT 57.078 32.000 5.44 3.69 43.41 4.40
9073 13365 5.808042 ATGTTAAAGTCATAGCTGTGCTG 57.192 39.130 5.44 0.00 40.10 4.41
9074 13366 3.436704 TGTTAAAGTCATAGCTGTGCTGC 59.563 43.478 5.44 0.00 40.10 5.25
9075 13367 2.486472 AAAGTCATAGCTGTGCTGCT 57.514 45.000 5.44 8.53 46.11 4.24
9084 13376 3.705043 AGCTGTGCTGCTATTTTATGC 57.295 42.857 0.00 0.00 42.10 3.14
9085 13377 3.018856 AGCTGTGCTGCTATTTTATGCA 58.981 40.909 0.00 0.00 42.10 3.96
9086 13378 3.444742 AGCTGTGCTGCTATTTTATGCAA 59.555 39.130 0.00 0.00 42.10 4.08
9087 13379 4.082081 AGCTGTGCTGCTATTTTATGCAAA 60.082 37.500 0.00 0.00 42.10 3.68
9088 13380 4.626604 GCTGTGCTGCTATTTTATGCAAAA 59.373 37.500 0.00 0.00 38.81 2.44
9091 13383 6.396450 TGTGCTGCTATTTTATGCAAAATCA 58.604 32.000 0.00 0.00 42.17 2.57
9093 13385 5.811613 TGCTGCTATTTTATGCAAAATCACC 59.188 36.000 0.00 0.00 42.17 4.02
9094 13386 5.811613 GCTGCTATTTTATGCAAAATCACCA 59.188 36.000 0.00 0.00 42.17 4.17
9097 13389 8.254178 TGCTATTTTATGCAAAATCACCAAAG 57.746 30.769 0.00 0.00 42.17 2.77
9098 13390 7.333921 TGCTATTTTATGCAAAATCACCAAAGG 59.666 33.333 0.00 0.00 42.17 3.11
9099 13391 7.548780 GCTATTTTATGCAAAATCACCAAAGGA 59.451 33.333 0.00 0.00 42.17 3.36
9100 13392 7.671495 ATTTTATGCAAAATCACCAAAGGAC 57.329 32.000 0.00 0.00 39.63 3.85
9101 13393 6.418057 TTTATGCAAAATCACCAAAGGACT 57.582 33.333 0.00 0.00 0.00 3.85
9102 13394 7.531857 TTTATGCAAAATCACCAAAGGACTA 57.468 32.000 0.00 0.00 0.00 2.59
9104 13396 5.860941 TGCAAAATCACCAAAGGACTAAA 57.139 34.783 0.00 0.00 0.00 1.85
9105 13397 6.418057 TGCAAAATCACCAAAGGACTAAAT 57.582 33.333 0.00 0.00 0.00 1.40
9106 13398 6.222389 TGCAAAATCACCAAAGGACTAAATG 58.778 36.000 0.00 0.00 0.00 2.32
9108 13400 6.741240 GCAAAATCACCAAAGGACTAAATGGT 60.741 38.462 0.00 0.00 46.80 3.55
9110 13402 8.364142 CAAAATCACCAAAGGACTAAATGGTTA 58.636 33.333 0.00 0.00 43.47 2.85
9111 13403 7.703058 AATCACCAAAGGACTAAATGGTTAG 57.297 36.000 0.00 0.00 43.47 2.34
9112 13404 5.566469 TCACCAAAGGACTAAATGGTTAGG 58.434 41.667 0.00 0.00 43.47 2.69
9113 13405 5.073965 TCACCAAAGGACTAAATGGTTAGGT 59.926 40.000 0.00 0.00 43.47 3.08
9114 13406 5.773176 CACCAAAGGACTAAATGGTTAGGTT 59.227 40.000 0.00 0.00 43.47 3.50
9116 13408 6.266786 ACCAAAGGACTAAATGGTTAGGTTTG 59.733 38.462 0.00 5.38 43.47 2.93
9117 13409 6.266786 CCAAAGGACTAAATGGTTAGGTTTGT 59.733 38.462 12.38 0.00 41.03 2.83
9118 13410 7.201965 CCAAAGGACTAAATGGTTAGGTTTGTT 60.202 37.037 12.38 0.00 41.03 2.83
9119 13411 7.520451 AAGGACTAAATGGTTAGGTTTGTTC 57.480 36.000 0.00 0.00 41.03 3.18
9120 13412 6.607019 AGGACTAAATGGTTAGGTTTGTTCA 58.393 36.000 0.00 0.00 41.03 3.18
9121 13413 6.715264 AGGACTAAATGGTTAGGTTTGTTCAG 59.285 38.462 0.00 0.00 41.03 3.02
9122 13414 6.072119 GGACTAAATGGTTAGGTTTGTTCAGG 60.072 42.308 0.00 0.00 41.03 3.86
9124 13416 6.837048 ACTAAATGGTTAGGTTTGTTCAGGTT 59.163 34.615 0.00 0.00 41.03 3.50
9126 13418 2.691011 TGGTTAGGTTTGTTCAGGTTGC 59.309 45.455 0.00 0.00 0.00 4.17
9128 13420 3.243401 GGTTAGGTTTGTTCAGGTTGCAG 60.243 47.826 0.00 0.00 0.00 4.41
9129 13421 0.746659 AGGTTTGTTCAGGTTGCAGC 59.253 50.000 0.00 0.00 0.00 5.25
9131 13423 1.134848 GGTTTGTTCAGGTTGCAGCAA 60.135 47.619 2.83 2.83 0.00 3.91
9132 13424 2.615869 GTTTGTTCAGGTTGCAGCAAA 58.384 42.857 10.11 0.00 0.00 3.68
9133 13425 2.999355 GTTTGTTCAGGTTGCAGCAAAA 59.001 40.909 10.11 0.00 0.00 2.44
9135 13427 1.211743 GTTCAGGTTGCAGCAAAAGC 58.788 50.000 10.11 0.00 0.00 3.51
9136 13428 1.113788 TTCAGGTTGCAGCAAAAGCT 58.886 45.000 10.11 0.37 35.82 3.74
9137 13429 2.895039 CAGGTTGCAGCAAAAGCTG 58.105 52.632 10.11 10.66 44.08 4.24
9138 13430 0.103572 CAGGTTGCAGCAAAAGCTGT 59.896 50.000 10.11 0.00 44.34 4.40
9139 13431 0.826062 AGGTTGCAGCAAAAGCTGTT 59.174 45.000 10.11 0.00 39.75 3.16
9140 13432 1.207811 AGGTTGCAGCAAAAGCTGTTT 59.792 42.857 10.11 0.00 39.75 2.83
9174 13466 3.963383 TTTTTCTTCTCTGGAACGTGC 57.037 42.857 0.00 0.00 0.00 5.34
9176 13468 1.865865 TTCTTCTCTGGAACGTGCAC 58.134 50.000 6.82 6.82 0.00 4.57
9177 13469 0.033504 TCTTCTCTGGAACGTGCACC 59.966 55.000 12.15 0.00 0.00 5.01
9178 13470 0.249868 CTTCTCTGGAACGTGCACCA 60.250 55.000 12.15 1.92 34.81 4.17
9179 13471 0.179234 TTCTCTGGAACGTGCACCAA 59.821 50.000 12.15 0.00 35.67 3.67
9180 13472 0.179234 TCTCTGGAACGTGCACCAAA 59.821 50.000 12.15 0.00 35.67 3.28
9182 13474 0.950836 TCTGGAACGTGCACCAAATG 59.049 50.000 12.15 0.00 35.67 2.32
9201 13493 1.535028 TGCACGGCATTTTGTACTGAG 59.465 47.619 0.00 0.00 31.71 3.35
9203 13495 2.159653 GCACGGCATTTTGTACTGAGAG 60.160 50.000 0.00 0.00 0.00 3.20
9207 13499 4.578928 ACGGCATTTTGTACTGAGAGTTTT 59.421 37.500 0.00 0.00 0.00 2.43
9208 13500 5.761234 ACGGCATTTTGTACTGAGAGTTTTA 59.239 36.000 0.00 0.00 0.00 1.52
9210 13502 7.040686 ACGGCATTTTGTACTGAGAGTTTTAAT 60.041 33.333 0.00 0.00 0.00 1.40
9211 13503 7.271223 CGGCATTTTGTACTGAGAGTTTTAATG 59.729 37.037 0.00 0.00 0.00 1.90
9212 13504 7.062255 GGCATTTTGTACTGAGAGTTTTAATGC 59.938 37.037 0.00 0.00 37.11 3.56
9214 13506 9.121517 CATTTTGTACTGAGAGTTTTAATGCAG 57.878 33.333 0.00 0.00 0.00 4.41
9216 13508 8.621532 TTTGTACTGAGAGTTTTAATGCAGAT 57.378 30.769 0.00 0.00 0.00 2.90
9217 13509 8.621532 TTGTACTGAGAGTTTTAATGCAGATT 57.378 30.769 0.00 0.00 0.00 2.40
9218 13510 9.719355 TTGTACTGAGAGTTTTAATGCAGATTA 57.281 29.630 0.00 0.00 0.00 1.75
9219 13511 9.890629 TGTACTGAGAGTTTTAATGCAGATTAT 57.109 29.630 0.00 0.00 0.00 1.28
9222 13514 9.236006 ACTGAGAGTTTTAATGCAGATTATTGT 57.764 29.630 0.00 0.00 0.00 2.71
9237 13529 7.238571 CAGATTATTGTTTTCTGCATTTTGCC 58.761 34.615 0.00 0.00 44.23 4.52
9238 13530 5.938438 TTATTGTTTTCTGCATTTTGCCC 57.062 34.783 0.00 0.00 44.23 5.36
9239 13531 2.996249 TGTTTTCTGCATTTTGCCCA 57.004 40.000 0.00 0.00 44.23 5.36
9240 13532 2.559440 TGTTTTCTGCATTTTGCCCAC 58.441 42.857 0.00 0.00 44.23 4.61
9242 13534 3.205338 GTTTTCTGCATTTTGCCCACTT 58.795 40.909 0.00 0.00 44.23 3.16
9243 13535 3.557228 TTTCTGCATTTTGCCCACTTT 57.443 38.095 0.00 0.00 44.23 2.66
9245 13537 1.000385 TCTGCATTTTGCCCACTTTCG 60.000 47.619 0.00 0.00 44.23 3.46
9246 13538 0.749649 TGCATTTTGCCCACTTTCGT 59.250 45.000 0.00 0.00 44.23 3.85
9247 13539 1.137872 TGCATTTTGCCCACTTTCGTT 59.862 42.857 0.00 0.00 44.23 3.85
9248 13540 2.209273 GCATTTTGCCCACTTTCGTTT 58.791 42.857 0.00 0.00 37.42 3.60
9249 13541 3.181475 TGCATTTTGCCCACTTTCGTTTA 60.181 39.130 0.00 0.00 44.23 2.01
9250 13542 3.804873 GCATTTTGCCCACTTTCGTTTAA 59.195 39.130 0.00 0.00 37.42 1.52
9251 13543 4.318475 GCATTTTGCCCACTTTCGTTTAAC 60.318 41.667 0.00 0.00 37.42 2.01
9252 13544 4.451629 TTTTGCCCACTTTCGTTTAACA 57.548 36.364 0.00 0.00 0.00 2.41
9253 13545 3.423996 TTGCCCACTTTCGTTTAACAC 57.576 42.857 0.00 0.00 0.00 3.32
9255 13547 2.356382 TGCCCACTTTCGTTTAACACAG 59.644 45.455 0.00 0.00 0.00 3.66
9259 13551 4.277423 CCCACTTTCGTTTAACACAGGATT 59.723 41.667 0.00 0.00 0.00 3.01
9260 13552 5.221165 CCCACTTTCGTTTAACACAGGATTT 60.221 40.000 0.00 0.00 0.00 2.17
9262 13554 6.416750 CCACTTTCGTTTAACACAGGATTTTC 59.583 38.462 0.00 0.00 0.00 2.29
9263 13555 6.140108 CACTTTCGTTTAACACAGGATTTTCG 59.860 38.462 0.00 0.00 0.00 3.46
9264 13556 5.738118 TTCGTTTAACACAGGATTTTCGT 57.262 34.783 0.00 0.00 0.00 3.85
9265 13557 5.333046 TCGTTTAACACAGGATTTTCGTC 57.667 39.130 0.00 0.00 0.00 4.20
9267 13559 4.024725 CGTTTAACACAGGATTTTCGTCCA 60.025 41.667 0.00 0.00 40.90 4.02
9268 13560 5.504337 CGTTTAACACAGGATTTTCGTCCAA 60.504 40.000 0.00 0.00 40.90 3.53
9270 13562 3.208747 ACACAGGATTTTCGTCCAACT 57.791 42.857 0.00 0.00 40.90 3.16
9271 13563 3.551846 ACACAGGATTTTCGTCCAACTT 58.448 40.909 0.00 0.00 40.90 2.66
9272 13564 3.564225 ACACAGGATTTTCGTCCAACTTC 59.436 43.478 0.00 0.00 40.90 3.01
9273 13565 3.563808 CACAGGATTTTCGTCCAACTTCA 59.436 43.478 0.00 0.00 40.90 3.02
9274 13566 4.036262 CACAGGATTTTCGTCCAACTTCAA 59.964 41.667 0.00 0.00 40.90 2.69
9275 13567 4.036380 ACAGGATTTTCGTCCAACTTCAAC 59.964 41.667 0.00 0.00 40.90 3.18
9276 13568 4.275936 CAGGATTTTCGTCCAACTTCAACT 59.724 41.667 0.00 0.00 40.90 3.16
9278 13570 5.008712 AGGATTTTCGTCCAACTTCAACTTC 59.991 40.000 0.00 0.00 40.90 3.01
9282 13574 4.131649 TCGTCCAACTTCAACTTCAGAA 57.868 40.909 0.00 0.00 0.00 3.02
9300 13592 9.262358 ACTTCAGAAGTTGAATGAAACTAGTAC 57.738 33.333 10.27 0.00 44.48 2.73
9302 13594 7.159372 TCAGAAGTTGAATGAAACTAGTACCC 58.841 38.462 0.00 0.00 39.48 3.69
9303 13595 6.090898 CAGAAGTTGAATGAAACTAGTACCCG 59.909 42.308 0.00 0.00 39.48 5.28
9304 13596 5.733620 AGTTGAATGAAACTAGTACCCGA 57.266 39.130 0.00 0.00 38.62 5.14
9306 13598 4.730949 TGAATGAAACTAGTACCCGAGG 57.269 45.455 0.00 0.00 0.00 4.63
9307 13599 3.449737 TGAATGAAACTAGTACCCGAGGG 59.550 47.826 6.63 6.63 42.03 4.30
9308 13600 2.905415 TGAAACTAGTACCCGAGGGA 57.095 50.000 16.26 0.00 38.96 4.20
9309 13601 2.731572 TGAAACTAGTACCCGAGGGAG 58.268 52.381 16.26 4.06 38.96 4.30
9310 13602 1.408340 GAAACTAGTACCCGAGGGAGC 59.592 57.143 16.26 6.88 38.96 4.70
9311 13603 0.750911 AACTAGTACCCGAGGGAGCG 60.751 60.000 16.26 1.14 38.96 5.03
9312 13604 2.517875 TAGTACCCGAGGGAGCGC 60.518 66.667 16.26 0.00 38.96 5.92
9313 13605 3.348554 TAGTACCCGAGGGAGCGCA 62.349 63.158 16.26 0.00 38.96 6.09
9314 13606 4.208686 GTACCCGAGGGAGCGCAG 62.209 72.222 16.26 0.00 38.96 5.18
9318 13610 4.504916 CCGAGGGAGCGCAGAGTG 62.505 72.222 11.47 0.00 0.00 3.51
9320 13612 4.074526 GAGGGAGCGCAGAGTGCA 62.075 66.667 11.47 0.00 45.36 4.57
9325 13617 4.299547 AGCGCAGAGTGCACCGAA 62.300 61.111 14.63 0.00 45.36 4.30
9326 13618 3.121030 GCGCAGAGTGCACCGAAT 61.121 61.111 14.63 0.00 45.36 3.34
9329 13621 0.238289 CGCAGAGTGCACCGAATTTT 59.762 50.000 14.63 0.00 45.36 1.82
9332 13624 1.608590 CAGAGTGCACCGAATTTTGGT 59.391 47.619 14.63 2.17 41.47 3.67
9333 13625 1.880027 AGAGTGCACCGAATTTTGGTC 59.120 47.619 14.63 0.00 37.72 4.02
9334 13626 1.880027 GAGTGCACCGAATTTTGGTCT 59.120 47.619 14.63 0.56 37.72 3.85
9336 13628 0.871722 TGCACCGAATTTTGGTCTCG 59.128 50.000 5.26 0.00 37.72 4.04
9337 13629 1.153353 GCACCGAATTTTGGTCTCGA 58.847 50.000 5.26 0.00 37.72 4.04
9338 13630 1.136057 GCACCGAATTTTGGTCTCGAC 60.136 52.381 5.26 0.00 37.72 4.20
9339 13631 1.126113 CACCGAATTTTGGTCTCGACG 59.874 52.381 5.26 0.00 37.72 5.12
9340 13632 1.269936 ACCGAATTTTGGTCTCGACGT 60.270 47.619 2.17 0.00 33.35 4.34
9341 13633 1.126113 CCGAATTTTGGTCTCGACGTG 59.874 52.381 0.00 0.00 34.52 4.49
9342 13634 1.790623 CGAATTTTGGTCTCGACGTGT 59.209 47.619 0.00 0.00 34.52 4.49
9344 13636 3.181546 CGAATTTTGGTCTCGACGTGTAC 60.182 47.826 0.00 0.00 34.52 2.90
9346 13638 0.661187 TTTGGTCTCGACGTGTACGC 60.661 55.000 4.06 0.00 44.43 4.42
9347 13639 2.572647 GGTCTCGACGTGTACGCG 60.573 66.667 26.18 26.18 44.43 6.01
9348 13640 2.572647 GTCTCGACGTGTACGCGG 60.573 66.667 30.21 15.23 44.43 6.46
9349 13641 3.043713 TCTCGACGTGTACGCGGT 61.044 61.111 30.21 17.02 44.43 5.68
9352 13644 0.452618 CTCGACGTGTACGCGGTTAA 60.453 55.000 30.21 13.18 44.43 2.01
9353 13645 0.724453 TCGACGTGTACGCGGTTAAC 60.724 55.000 30.21 15.31 44.43 2.01
9354 13646 0.996229 CGACGTGTACGCGGTTAACA 60.996 55.000 30.21 6.40 44.43 2.41
9355 13647 1.339711 GACGTGTACGCGGTTAACAT 58.660 50.000 30.21 9.57 44.43 2.71
9356 13648 1.720852 GACGTGTACGCGGTTAACATT 59.279 47.619 30.21 8.81 44.43 2.71
9357 13649 1.456544 ACGTGTACGCGGTTAACATTG 59.543 47.619 30.21 8.58 44.43 2.82
9358 13650 1.201834 CGTGTACGCGGTTAACATTGG 60.202 52.381 20.84 0.04 0.00 3.16
9360 13652 1.001746 TGTACGCGGTTAACATTGGGA 59.998 47.619 12.47 0.00 0.00 4.37
9361 13653 1.662122 GTACGCGGTTAACATTGGGAG 59.338 52.381 12.47 0.00 0.00 4.30
9363 13655 1.302383 CGCGGTTAACATTGGGAGCA 61.302 55.000 8.10 0.00 0.00 4.26
9365 13657 1.821216 CGGTTAACATTGGGAGCAGT 58.179 50.000 8.10 0.00 0.00 4.40
9367 13659 1.202348 GGTTAACATTGGGAGCAGTGC 59.798 52.381 7.13 7.13 0.00 4.40
9368 13660 1.885887 GTTAACATTGGGAGCAGTGCA 59.114 47.619 19.20 0.00 0.00 4.57
9369 13661 1.533625 TAACATTGGGAGCAGTGCAC 58.466 50.000 19.20 9.40 0.00 4.57
9370 13662 0.467844 AACATTGGGAGCAGTGCACA 60.468 50.000 21.04 10.45 0.00 4.57
9372 13664 0.892358 CATTGGGAGCAGTGCACAGT 60.892 55.000 21.04 7.25 0.00 3.55
9373 13665 0.178981 ATTGGGAGCAGTGCACAGTT 60.179 50.000 21.04 9.35 0.00 3.16
9376 13668 1.133945 TGGGAGCAGTGCACAGTTTTA 60.134 47.619 21.04 0.00 0.00 1.52
9377 13669 2.162681 GGGAGCAGTGCACAGTTTTAT 58.837 47.619 21.04 0.00 0.00 1.40
9378 13670 2.095059 GGGAGCAGTGCACAGTTTTATG 60.095 50.000 21.04 7.65 0.00 1.90
9379 13671 2.589014 GAGCAGTGCACAGTTTTATGC 58.411 47.619 21.04 17.58 42.40 3.14
9387 13679 3.063861 TGCACAGTTTTATGCAGATAGCG 59.936 43.478 0.00 0.00 46.63 4.26
9388 13680 5.393411 TGCACAGTTTTATGCAGATAGCGT 61.393 41.667 0.00 0.00 46.63 5.07
9389 13681 6.138110 TGCACAGTTTTATGCAGATAGCGTA 61.138 40.000 0.00 0.00 46.63 4.42
9390 13682 7.400309 TGCACAGTTTTATGCAGATAGCGTAT 61.400 38.462 0.00 0.00 46.63 3.06
9391 13683 9.308266 TGCACAGTTTTATGCAGATAGCGTATG 62.308 40.741 0.00 0.00 46.63 2.39
9399 13691 3.506810 GCAGATAGCGTATGTCATCTCC 58.493 50.000 0.00 0.00 0.00 3.71
9400 13692 3.192422 GCAGATAGCGTATGTCATCTCCT 59.808 47.826 0.00 0.00 0.00 3.69
9401 13693 4.321601 GCAGATAGCGTATGTCATCTCCTT 60.322 45.833 0.00 0.00 0.00 3.36
9403 13695 5.861251 CAGATAGCGTATGTCATCTCCTTTC 59.139 44.000 0.00 0.00 0.00 2.62
9404 13696 5.536538 AGATAGCGTATGTCATCTCCTTTCA 59.463 40.000 0.00 0.00 0.00 2.69
9407 13699 3.799420 GCGTATGTCATCTCCTTTCAGTC 59.201 47.826 0.00 0.00 0.00 3.51
9408 13700 4.440802 GCGTATGTCATCTCCTTTCAGTCT 60.441 45.833 0.00 0.00 0.00 3.24
9410 13702 4.751767 ATGTCATCTCCTTTCAGTCTCC 57.248 45.455 0.00 0.00 0.00 3.71
9411 13703 3.510459 TGTCATCTCCTTTCAGTCTCCA 58.490 45.455 0.00 0.00 0.00 3.86
9414 13706 3.453717 TCATCTCCTTTCAGTCTCCATGG 59.546 47.826 4.97 4.97 0.00 3.66
9415 13707 3.190383 TCTCCTTTCAGTCTCCATGGA 57.810 47.619 15.27 15.27 0.00 3.41
9416 13708 3.520696 TCTCCTTTCAGTCTCCATGGAA 58.479 45.455 17.00 4.18 0.00 3.53
9417 13709 4.107072 TCTCCTTTCAGTCTCCATGGAAT 58.893 43.478 17.00 1.61 0.00 3.01
9418 13710 4.080695 TCTCCTTTCAGTCTCCATGGAATG 60.081 45.833 17.00 14.54 46.21 2.67
9420 13712 2.425143 TTCAGTCTCCATGGAATGCC 57.575 50.000 17.00 3.78 44.97 4.40
9422 13714 0.549950 CAGTCTCCATGGAATGCCCT 59.450 55.000 17.00 4.31 44.97 5.19
9423 13715 1.064166 CAGTCTCCATGGAATGCCCTT 60.064 52.381 17.00 0.00 44.97 3.95
9424 13716 1.064166 AGTCTCCATGGAATGCCCTTG 60.064 52.381 17.00 1.11 44.97 3.61
9425 13717 1.002069 TCTCCATGGAATGCCCTTGT 58.998 50.000 17.00 0.00 44.97 3.16
9426 13718 1.108776 CTCCATGGAATGCCCTTGTG 58.891 55.000 17.00 0.00 44.97 3.33
9429 13721 1.259609 CATGGAATGCCCTTGTGTGT 58.740 50.000 0.00 0.00 37.62 3.72
9431 13723 1.290009 GGAATGCCCTTGTGTGTGC 59.710 57.895 0.00 0.00 0.00 4.57
9432 13724 1.181098 GGAATGCCCTTGTGTGTGCT 61.181 55.000 0.00 0.00 0.00 4.40
9434 13726 1.200020 GAATGCCCTTGTGTGTGCTAC 59.800 52.381 0.00 0.00 0.00 3.58
9436 13728 1.073199 GCCCTTGTGTGTGCTACCT 59.927 57.895 0.00 0.00 0.00 3.08
9437 13729 0.955919 GCCCTTGTGTGTGCTACCTC 60.956 60.000 0.00 0.00 0.00 3.85
9440 13732 1.151668 CTTGTGTGTGCTACCTCTGC 58.848 55.000 0.00 0.00 0.00 4.26
9441 13733 0.758734 TTGTGTGTGCTACCTCTGCT 59.241 50.000 0.00 0.00 0.00 4.24
9442 13734 0.318441 TGTGTGTGCTACCTCTGCTC 59.682 55.000 0.00 0.00 0.00 4.26
9443 13735 0.734253 GTGTGTGCTACCTCTGCTCG 60.734 60.000 0.00 0.00 0.00 5.03
9444 13736 0.893727 TGTGTGCTACCTCTGCTCGA 60.894 55.000 0.00 0.00 0.00 4.04
9445 13737 0.456995 GTGTGCTACCTCTGCTCGAC 60.457 60.000 0.00 0.00 0.00 4.20
9446 13738 0.893727 TGTGCTACCTCTGCTCGACA 60.894 55.000 0.00 0.00 0.00 4.35
9448 13740 1.226435 GCTACCTCTGCTCGACACG 60.226 63.158 0.00 0.00 0.00 4.49
9449 13741 1.645704 GCTACCTCTGCTCGACACGA 61.646 60.000 0.00 0.00 0.00 4.35
9458 13750 2.354656 TCGACACGAGTGCACAGC 60.355 61.111 21.04 9.69 0.00 4.40
9459 13751 2.355126 CGACACGAGTGCACAGCT 60.355 61.111 21.04 0.00 0.00 4.24
9460 13752 1.951130 CGACACGAGTGCACAGCTT 60.951 57.895 21.04 0.00 0.00 3.74
9461 13753 1.856012 GACACGAGTGCACAGCTTC 59.144 57.895 21.04 6.69 0.00 3.86
9462 13754 0.598680 GACACGAGTGCACAGCTTCT 60.599 55.000 21.04 0.00 0.00 2.85
9464 13756 1.958205 ACGAGTGCACAGCTTCTGC 60.958 57.895 21.04 6.23 34.37 4.26
9465 13757 1.957695 CGAGTGCACAGCTTCTGCA 60.958 57.895 21.04 11.13 42.42 4.41
9474 13766 3.363351 GCTTCTGCAGCTTGGCTT 58.637 55.556 9.47 0.00 46.27 4.35
9475 13767 1.664306 GCTTCTGCAGCTTGGCTTT 59.336 52.632 9.47 0.00 46.27 3.51
9477 13769 0.666577 CTTCTGCAGCTTGGCTTTGC 60.667 55.000 9.47 0.00 36.40 3.68
9488 13780 3.737172 GCTTTGCCGGTGCGTGAT 61.737 61.111 1.90 0.00 41.78 3.06
9489 13781 2.480555 CTTTGCCGGTGCGTGATC 59.519 61.111 1.90 0.00 41.78 2.92
9490 13782 2.031919 TTTGCCGGTGCGTGATCT 59.968 55.556 1.90 0.00 41.78 2.75
9492 13784 3.529341 TTGCCGGTGCGTGATCTGT 62.529 57.895 1.90 0.00 41.78 3.41
9493 13785 3.188786 GCCGGTGCGTGATCTGTC 61.189 66.667 1.90 0.00 0.00 3.51
9494 13786 2.261361 CCGGTGCGTGATCTGTCA 59.739 61.111 0.00 0.00 0.00 3.58
9516 13808 4.833469 CGTATACGTGACAAAATGCTCA 57.167 40.909 17.16 0.00 34.11 4.26
9517 13809 4.811208 CGTATACGTGACAAAATGCTCAG 58.189 43.478 17.16 0.00 34.11 3.35
9518 13810 3.747099 ATACGTGACAAAATGCTCAGC 57.253 42.857 0.00 0.00 0.00 4.26
9519 13811 1.597742 ACGTGACAAAATGCTCAGCT 58.402 45.000 0.00 0.00 0.00 4.24
9520 13812 1.265095 ACGTGACAAAATGCTCAGCTG 59.735 47.619 7.63 7.63 0.00 4.24
9521 13813 1.400629 CGTGACAAAATGCTCAGCTGG 60.401 52.381 15.13 5.82 0.00 4.85
9522 13814 0.599558 TGACAAAATGCTCAGCTGGC 59.400 50.000 15.13 16.41 0.00 4.85
9523 13815 0.108945 GACAAAATGCTCAGCTGGCC 60.109 55.000 15.13 5.71 0.00 5.36
9524 13816 0.828762 ACAAAATGCTCAGCTGGCCA 60.829 50.000 15.13 4.71 0.00 5.36
9526 13818 0.541296 AAAATGCTCAGCTGGCCAGT 60.541 50.000 32.81 17.48 0.00 4.00
9530 13822 4.106925 CTCAGCTGGCCAGTCCCC 62.107 72.222 32.81 16.86 0.00 4.81
9541 13833 1.228124 CAGTCCCCAGCGGTTGAAA 60.228 57.895 0.00 0.00 0.00 2.69
9543 13835 0.609131 AGTCCCCAGCGGTTGAAATG 60.609 55.000 0.00 0.00 0.00 2.32
9544 13836 1.976474 TCCCCAGCGGTTGAAATGC 60.976 57.895 0.00 0.00 0.00 3.56
9545 13837 2.274645 CCCCAGCGGTTGAAATGCA 61.275 57.895 0.00 0.00 0.00 3.96
9546 13838 1.213537 CCCAGCGGTTGAAATGCAG 59.786 57.895 0.00 0.00 0.00 4.41
9550 13842 2.472816 CAGCGGTTGAAATGCAGTTTT 58.527 42.857 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.391577 TGTGCAGCTCTCAGCAAAAA 58.608 45.000 0.00 0.00 45.56 1.94
9 10 1.612676 ATGTGCAGCTCTCAGCAAAA 58.387 45.000 0.00 0.00 45.56 2.44
10 11 2.477845 TATGTGCAGCTCTCAGCAAA 57.522 45.000 0.00 0.00 45.56 3.68
11 12 2.289882 ACTTATGTGCAGCTCTCAGCAA 60.290 45.455 0.00 0.00 45.56 3.91
12 13 1.277273 ACTTATGTGCAGCTCTCAGCA 59.723 47.619 0.00 0.00 45.56 4.41
13 14 1.932511 GACTTATGTGCAGCTCTCAGC 59.067 52.381 0.00 0.00 42.84 4.26
14 15 2.093816 TGGACTTATGTGCAGCTCTCAG 60.094 50.000 0.00 0.00 39.59 3.35
15 16 1.901833 TGGACTTATGTGCAGCTCTCA 59.098 47.619 0.00 0.00 39.59 3.27
16 17 2.680312 TGGACTTATGTGCAGCTCTC 57.320 50.000 0.00 0.00 39.59 3.20
17 18 3.423539 TTTGGACTTATGTGCAGCTCT 57.576 42.857 3.26 0.00 44.96 4.09
18 19 3.441572 ACATTTGGACTTATGTGCAGCTC 59.558 43.478 3.26 0.00 44.96 4.09
19 20 3.424703 ACATTTGGACTTATGTGCAGCT 58.575 40.909 3.26 0.00 44.96 4.24
20 21 3.855689 ACATTTGGACTTATGTGCAGC 57.144 42.857 3.26 0.00 44.96 5.25
21 22 6.215121 TCAAAACATTTGGACTTATGTGCAG 58.785 36.000 3.26 0.00 44.96 4.41
22 23 6.154203 TCAAAACATTTGGACTTATGTGCA 57.846 33.333 0.00 0.00 42.73 4.57
23 24 7.475771 TTTCAAAACATTTGGACTTATGTGC 57.524 32.000 3.25 0.00 35.29 4.57
26 27 9.881529 CCATTTTTCAAAACATTTGGACTTATG 57.118 29.630 3.25 0.00 29.83 1.90
27 28 9.844257 TCCATTTTTCAAAACATTTGGACTTAT 57.156 25.926 3.25 0.00 31.75 1.73
28 29 9.323985 CTCCATTTTTCAAAACATTTGGACTTA 57.676 29.630 3.25 0.00 32.72 2.24
29 30 7.201723 GCTCCATTTTTCAAAACATTTGGACTT 60.202 33.333 3.25 0.00 32.72 3.01
30 31 6.260714 GCTCCATTTTTCAAAACATTTGGACT 59.739 34.615 3.25 0.00 32.72 3.85
31 32 6.429624 GCTCCATTTTTCAAAACATTTGGAC 58.570 36.000 3.25 0.00 32.72 4.02
32 33 5.236047 CGCTCCATTTTTCAAAACATTTGGA 59.764 36.000 3.25 5.40 34.17 3.53
33 34 5.007528 ACGCTCCATTTTTCAAAACATTTGG 59.992 36.000 3.25 0.00 0.00 3.28
34 35 6.046885 ACGCTCCATTTTTCAAAACATTTG 57.953 33.333 0.00 0.00 0.00 2.32
35 36 6.201997 GGTACGCTCCATTTTTCAAAACATTT 59.798 34.615 0.00 0.00 0.00 2.32
36 37 5.694458 GGTACGCTCCATTTTTCAAAACATT 59.306 36.000 0.00 0.00 0.00 2.71
37 38 5.010617 AGGTACGCTCCATTTTTCAAAACAT 59.989 36.000 0.00 0.00 0.00 2.71
38 39 4.339814 AGGTACGCTCCATTTTTCAAAACA 59.660 37.500 0.00 0.00 0.00 2.83
39 40 4.866921 AGGTACGCTCCATTTTTCAAAAC 58.133 39.130 0.00 0.00 0.00 2.43
40 41 4.580995 TGAGGTACGCTCCATTTTTCAAAA 59.419 37.500 8.36 0.00 0.00 2.44
41 42 4.023536 GTGAGGTACGCTCCATTTTTCAAA 60.024 41.667 8.36 0.00 0.00 2.69
42 43 3.500680 GTGAGGTACGCTCCATTTTTCAA 59.499 43.478 8.36 0.00 0.00 2.69
43 44 3.071479 GTGAGGTACGCTCCATTTTTCA 58.929 45.455 8.36 0.00 0.00 2.69
44 45 2.093783 CGTGAGGTACGCTCCATTTTTC 59.906 50.000 8.36 0.00 46.92 2.29
45 46 2.073816 CGTGAGGTACGCTCCATTTTT 58.926 47.619 8.36 0.00 46.92 1.94
46 47 1.722011 CGTGAGGTACGCTCCATTTT 58.278 50.000 8.36 0.00 46.92 1.82
47 48 3.436001 CGTGAGGTACGCTCCATTT 57.564 52.632 8.36 0.00 46.92 2.32
56 57 3.181510 GGACAATTTGATGCGTGAGGTAC 60.182 47.826 2.79 0.00 0.00 3.34
57 58 3.006940 GGACAATTTGATGCGTGAGGTA 58.993 45.455 2.79 0.00 0.00 3.08
58 59 1.812571 GGACAATTTGATGCGTGAGGT 59.187 47.619 2.79 0.00 0.00 3.85
59 60 1.811965 TGGACAATTTGATGCGTGAGG 59.188 47.619 2.79 0.00 0.00 3.86
60 61 2.414559 GGTGGACAATTTGATGCGTGAG 60.415 50.000 2.79 0.00 0.00 3.51
61 62 1.539388 GGTGGACAATTTGATGCGTGA 59.461 47.619 2.79 0.00 0.00 4.35
62 63 1.269174 TGGTGGACAATTTGATGCGTG 59.731 47.619 2.79 0.00 0.00 5.34
63 64 1.269448 GTGGTGGACAATTTGATGCGT 59.731 47.619 2.79 0.00 0.00 5.24
64 65 1.402720 GGTGGTGGACAATTTGATGCG 60.403 52.381 2.79 0.00 0.00 4.73
65 66 1.066929 GGGTGGTGGACAATTTGATGC 60.067 52.381 2.79 0.00 0.00 3.91
66 67 1.550072 GGGGTGGTGGACAATTTGATG 59.450 52.381 2.79 0.00 0.00 3.07
67 68 1.148867 TGGGGTGGTGGACAATTTGAT 59.851 47.619 2.79 0.00 0.00 2.57
68 69 0.558220 TGGGGTGGTGGACAATTTGA 59.442 50.000 2.79 0.00 0.00 2.69
69 70 1.418334 TTGGGGTGGTGGACAATTTG 58.582 50.000 0.00 0.00 0.00 2.32
70 71 2.414250 ATTGGGGTGGTGGACAATTT 57.586 45.000 0.00 0.00 29.89 1.82
71 72 2.414250 AATTGGGGTGGTGGACAATT 57.586 45.000 0.00 0.00 38.35 2.32
72 73 2.414250 AAATTGGGGTGGTGGACAAT 57.586 45.000 0.00 0.00 35.24 2.71
73 74 2.182516 AAAATTGGGGTGGTGGACAA 57.817 45.000 0.00 0.00 0.00 3.18
74 75 2.182516 AAAAATTGGGGTGGTGGACA 57.817 45.000 0.00 0.00 0.00 4.02
131 132 1.646540 CACCTGCGCTCACGAAAAA 59.353 52.632 9.73 0.00 43.93 1.94
132 133 2.892334 GCACCTGCGCTCACGAAAA 61.892 57.895 9.73 0.00 43.93 2.29
133 134 3.345808 GCACCTGCGCTCACGAAA 61.346 61.111 9.73 0.00 43.93 3.46
134 135 4.600576 TGCACCTGCGCTCACGAA 62.601 61.111 9.73 0.00 45.83 3.85
137 138 2.435586 ATCTGCACCTGCGCTCAC 60.436 61.111 9.73 0.00 45.83 3.51
138 139 2.435410 CATCTGCACCTGCGCTCA 60.435 61.111 9.73 0.00 45.83 4.26
139 140 2.125391 TCATCTGCACCTGCGCTC 60.125 61.111 9.73 0.00 45.83 5.03
140 141 2.125229 CTCATCTGCACCTGCGCT 60.125 61.111 9.73 0.00 45.83 5.92
141 142 3.873883 GCTCATCTGCACCTGCGC 61.874 66.667 0.00 0.00 45.83 6.09
142 143 2.125229 AGCTCATCTGCACCTGCG 60.125 61.111 0.00 0.00 45.83 5.18
143 144 2.172372 CGAGCTCATCTGCACCTGC 61.172 63.158 15.40 0.00 42.50 4.85
144 145 1.521010 CCGAGCTCATCTGCACCTG 60.521 63.158 15.40 0.00 34.99 4.00
145 146 2.729479 CCCGAGCTCATCTGCACCT 61.729 63.158 15.40 0.00 34.99 4.00
146 147 2.202987 CCCGAGCTCATCTGCACC 60.203 66.667 15.40 0.00 34.99 5.01
147 148 1.078848 AACCCGAGCTCATCTGCAC 60.079 57.895 15.40 0.00 34.99 4.57
148 149 1.219124 GAACCCGAGCTCATCTGCA 59.781 57.895 15.40 0.00 34.99 4.41
149 150 0.809241 CTGAACCCGAGCTCATCTGC 60.809 60.000 15.40 0.11 0.00 4.26
150 151 0.820226 TCTGAACCCGAGCTCATCTG 59.180 55.000 15.40 9.84 0.00 2.90
151 152 1.786937 ATCTGAACCCGAGCTCATCT 58.213 50.000 15.40 0.00 0.00 2.90
152 153 2.478831 GAATCTGAACCCGAGCTCATC 58.521 52.381 15.40 6.69 0.00 2.92
153 154 1.202463 CGAATCTGAACCCGAGCTCAT 60.202 52.381 15.40 0.00 0.00 2.90
154 155 0.173481 CGAATCTGAACCCGAGCTCA 59.827 55.000 15.40 0.00 0.00 4.26
155 156 0.456221 TCGAATCTGAACCCGAGCTC 59.544 55.000 2.73 2.73 0.00 4.09
156 157 0.895530 TTCGAATCTGAACCCGAGCT 59.104 50.000 0.00 0.00 32.41 4.09
157 158 1.941325 ATTCGAATCTGAACCCGAGC 58.059 50.000 4.39 0.00 32.41 5.03
158 159 4.201822 GGAAAATTCGAATCTGAACCCGAG 60.202 45.833 11.83 0.00 32.41 4.63
159 160 3.687698 GGAAAATTCGAATCTGAACCCGA 59.312 43.478 11.83 0.00 0.00 5.14
160 161 3.485216 CGGAAAATTCGAATCTGAACCCG 60.485 47.826 11.83 13.83 0.00 5.28
161 162 3.687698 TCGGAAAATTCGAATCTGAACCC 59.312 43.478 11.83 6.51 33.42 4.11
162 163 4.436986 GGTCGGAAAATTCGAATCTGAACC 60.437 45.833 11.83 10.63 38.42 3.62
163 164 4.153475 TGGTCGGAAAATTCGAATCTGAAC 59.847 41.667 11.83 13.48 38.42 3.18
164 165 4.320023 TGGTCGGAAAATTCGAATCTGAA 58.680 39.130 11.83 0.00 38.42 3.02
165 166 3.932822 TGGTCGGAAAATTCGAATCTGA 58.067 40.909 11.83 7.88 38.42 3.27
166 167 4.083537 TGTTGGTCGGAAAATTCGAATCTG 60.084 41.667 11.83 5.41 38.42 2.90
167 168 4.069304 TGTTGGTCGGAAAATTCGAATCT 58.931 39.130 11.83 1.43 38.42 2.40
168 169 4.156182 GTGTTGGTCGGAAAATTCGAATC 58.844 43.478 11.83 0.00 38.42 2.52
169 170 3.566322 TGTGTTGGTCGGAAAATTCGAAT 59.434 39.130 4.39 4.39 38.42 3.34
170 171 2.943690 TGTGTTGGTCGGAAAATTCGAA 59.056 40.909 0.00 0.00 38.42 3.71
171 172 2.562635 TGTGTTGGTCGGAAAATTCGA 58.437 42.857 0.00 0.00 0.00 3.71
172 173 3.058570 TGATGTGTTGGTCGGAAAATTCG 60.059 43.478 0.00 0.00 0.00 3.34
173 174 4.497473 TGATGTGTTGGTCGGAAAATTC 57.503 40.909 0.00 0.00 0.00 2.17
174 175 5.467035 AATGATGTGTTGGTCGGAAAATT 57.533 34.783 0.00 0.00 0.00 1.82
175 176 5.467035 AAATGATGTGTTGGTCGGAAAAT 57.533 34.783 0.00 0.00 0.00 1.82
176 177 4.927978 AAATGATGTGTTGGTCGGAAAA 57.072 36.364 0.00 0.00 0.00 2.29
177 178 4.927978 AAAATGATGTGTTGGTCGGAAA 57.072 36.364 0.00 0.00 0.00 3.13
178 179 4.582656 AGAAAAATGATGTGTTGGTCGGAA 59.417 37.500 0.00 0.00 0.00 4.30
179 180 4.141287 AGAAAAATGATGTGTTGGTCGGA 58.859 39.130 0.00 0.00 0.00 4.55
180 181 4.023279 TGAGAAAAATGATGTGTTGGTCGG 60.023 41.667 0.00 0.00 0.00 4.79
181 182 5.107109 TGAGAAAAATGATGTGTTGGTCG 57.893 39.130 0.00 0.00 0.00 4.79
182 183 5.464168 CCTGAGAAAAATGATGTGTTGGTC 58.536 41.667 0.00 0.00 0.00 4.02
183 184 4.281688 CCCTGAGAAAAATGATGTGTTGGT 59.718 41.667 0.00 0.00 0.00 3.67
184 185 4.523943 TCCCTGAGAAAAATGATGTGTTGG 59.476 41.667 0.00 0.00 0.00 3.77
185 186 5.474532 TCTCCCTGAGAAAAATGATGTGTTG 59.525 40.000 0.00 0.00 35.59 3.33
186 187 5.634118 TCTCCCTGAGAAAAATGATGTGTT 58.366 37.500 0.00 0.00 35.59 3.32
187 188 5.246981 TCTCCCTGAGAAAAATGATGTGT 57.753 39.130 0.00 0.00 35.59 3.72
210 211 9.072375 TGTTTGGTTTTTCTTTCAAGGATTTTT 57.928 25.926 0.00 0.00 0.00 1.94
211 212 8.628630 TGTTTGGTTTTTCTTTCAAGGATTTT 57.371 26.923 0.00 0.00 0.00 1.82
212 213 8.628630 TTGTTTGGTTTTTCTTTCAAGGATTT 57.371 26.923 0.00 0.00 0.00 2.17
213 214 8.100164 TCTTGTTTGGTTTTTCTTTCAAGGATT 58.900 29.630 0.00 0.00 34.01 3.01
214 215 7.549134 GTCTTGTTTGGTTTTTCTTTCAAGGAT 59.451 33.333 0.00 0.00 34.01 3.24
215 216 6.871492 GTCTTGTTTGGTTTTTCTTTCAAGGA 59.129 34.615 0.00 0.00 34.01 3.36
216 217 6.873605 AGTCTTGTTTGGTTTTTCTTTCAAGG 59.126 34.615 0.00 0.00 34.01 3.61
217 218 7.814587 AGAGTCTTGTTTGGTTTTTCTTTCAAG 59.185 33.333 0.00 0.00 34.35 3.02
218 219 7.666623 AGAGTCTTGTTTGGTTTTTCTTTCAA 58.333 30.769 0.00 0.00 0.00 2.69
219 220 7.176690 AGAGAGTCTTGTTTGGTTTTTCTTTCA 59.823 33.333 0.00 0.00 0.00 2.69
220 221 7.539436 AGAGAGTCTTGTTTGGTTTTTCTTTC 58.461 34.615 0.00 0.00 0.00 2.62
221 222 7.468141 AGAGAGTCTTGTTTGGTTTTTCTTT 57.532 32.000 0.00 0.00 0.00 2.52
222 223 7.468141 AAGAGAGTCTTGTTTGGTTTTTCTT 57.532 32.000 0.00 0.00 34.98 2.52
223 224 7.468141 AAAGAGAGTCTTGTTTGGTTTTTCT 57.532 32.000 0.00 0.00 36.71 2.52
224 225 8.459635 AGTAAAGAGAGTCTTGTTTGGTTTTTC 58.540 33.333 10.32 0.00 36.71 2.29
225 226 8.244113 CAGTAAAGAGAGTCTTGTTTGGTTTTT 58.756 33.333 10.32 0.00 36.71 1.94
226 227 7.610305 TCAGTAAAGAGAGTCTTGTTTGGTTTT 59.390 33.333 10.32 0.00 36.71 2.43
227 228 7.110155 TCAGTAAAGAGAGTCTTGTTTGGTTT 58.890 34.615 10.32 0.00 36.71 3.27
228 229 6.650120 TCAGTAAAGAGAGTCTTGTTTGGTT 58.350 36.000 10.32 0.00 36.71 3.67
229 230 6.235231 TCAGTAAAGAGAGTCTTGTTTGGT 57.765 37.500 10.32 0.00 36.71 3.67
230 231 5.178438 GCTCAGTAAAGAGAGTCTTGTTTGG 59.822 44.000 10.32 2.99 36.71 3.28
231 232 5.107683 CGCTCAGTAAAGAGAGTCTTGTTTG 60.108 44.000 10.32 0.00 36.71 2.93
232 233 4.985409 CGCTCAGTAAAGAGAGTCTTGTTT 59.015 41.667 0.00 0.39 36.71 2.83
233 234 4.278669 TCGCTCAGTAAAGAGAGTCTTGTT 59.721 41.667 0.00 0.00 36.71 2.83
234 235 3.821600 TCGCTCAGTAAAGAGAGTCTTGT 59.178 43.478 0.00 0.00 36.71 3.16
235 236 4.155099 TCTCGCTCAGTAAAGAGAGTCTTG 59.845 45.833 0.00 0.00 42.03 3.02
236 237 4.155280 GTCTCGCTCAGTAAAGAGAGTCTT 59.845 45.833 0.00 0.00 42.03 3.01
237 238 3.687698 GTCTCGCTCAGTAAAGAGAGTCT 59.312 47.826 0.00 0.00 42.03 3.24
238 239 3.687698 AGTCTCGCTCAGTAAAGAGAGTC 59.312 47.826 4.89 0.48 42.03 3.36
239 240 3.681593 AGTCTCGCTCAGTAAAGAGAGT 58.318 45.455 4.89 0.00 42.03 3.24
240 241 4.155099 TGAAGTCTCGCTCAGTAAAGAGAG 59.845 45.833 0.00 0.00 42.53 3.20
241 242 4.072839 TGAAGTCTCGCTCAGTAAAGAGA 58.927 43.478 0.00 0.00 37.87 3.10
242 243 4.427096 TGAAGTCTCGCTCAGTAAAGAG 57.573 45.455 0.00 0.00 38.68 2.85
243 244 4.702612 AGATGAAGTCTCGCTCAGTAAAGA 59.297 41.667 0.00 0.00 28.45 2.52
244 245 4.992688 AGATGAAGTCTCGCTCAGTAAAG 58.007 43.478 0.00 0.00 28.45 1.85
245 246 6.701145 ATAGATGAAGTCTCGCTCAGTAAA 57.299 37.500 0.00 0.00 38.42 2.01
246 247 7.119992 GGATATAGATGAAGTCTCGCTCAGTAA 59.880 40.741 0.00 0.00 38.42 2.24
247 248 6.596106 GGATATAGATGAAGTCTCGCTCAGTA 59.404 42.308 0.00 0.00 38.42 2.74
248 249 5.414454 GGATATAGATGAAGTCTCGCTCAGT 59.586 44.000 0.00 0.00 38.42 3.41
249 250 5.163663 GGGATATAGATGAAGTCTCGCTCAG 60.164 48.000 0.00 0.00 38.42 3.35
250 251 4.702612 GGGATATAGATGAAGTCTCGCTCA 59.297 45.833 0.00 0.00 38.42 4.26
251 252 4.947388 AGGGATATAGATGAAGTCTCGCTC 59.053 45.833 0.00 0.00 38.42 5.03
252 253 4.929479 AGGGATATAGATGAAGTCTCGCT 58.071 43.478 0.00 0.00 38.42 4.93
253 254 6.761099 TTAGGGATATAGATGAAGTCTCGC 57.239 41.667 0.00 0.00 38.42 5.03
254 255 8.798402 ACTTTTAGGGATATAGATGAAGTCTCG 58.202 37.037 0.00 0.00 38.42 4.04
255 256 9.921637 CACTTTTAGGGATATAGATGAAGTCTC 57.078 37.037 0.00 0.00 38.42 3.36
256 257 8.875168 CCACTTTTAGGGATATAGATGAAGTCT 58.125 37.037 0.00 0.00 41.11 3.24
257 258 8.871125 TCCACTTTTAGGGATATAGATGAAGTC 58.129 37.037 0.00 0.00 0.00 3.01
258 259 8.798975 TCCACTTTTAGGGATATAGATGAAGT 57.201 34.615 0.00 0.00 0.00 3.01
262 263 9.236006 CCAAATCCACTTTTAGGGATATAGATG 57.764 37.037 0.00 0.00 43.01 2.90
263 264 9.182642 TCCAAATCCACTTTTAGGGATATAGAT 57.817 33.333 0.00 0.00 43.01 1.98
264 265 8.575736 TCCAAATCCACTTTTAGGGATATAGA 57.424 34.615 0.00 0.00 43.01 1.98
265 266 9.813826 AATCCAAATCCACTTTTAGGGATATAG 57.186 33.333 0.00 0.00 43.01 1.31
266 267 9.807921 GAATCCAAATCCACTTTTAGGGATATA 57.192 33.333 0.00 0.00 43.01 0.86
267 268 7.730332 GGAATCCAAATCCACTTTTAGGGATAT 59.270 37.037 0.00 0.00 43.01 1.63
268 269 7.066781 GGAATCCAAATCCACTTTTAGGGATA 58.933 38.462 0.00 0.00 43.01 2.59
269 270 5.899547 GGAATCCAAATCCACTTTTAGGGAT 59.100 40.000 0.00 0.00 45.71 3.85
270 271 5.269189 GGAATCCAAATCCACTTTTAGGGA 58.731 41.667 0.00 0.00 36.92 4.20
271 272 4.405680 GGGAATCCAAATCCACTTTTAGGG 59.594 45.833 0.09 0.00 38.80 3.53
272 273 5.022787 TGGGAATCCAAATCCACTTTTAGG 58.977 41.667 0.09 0.00 40.73 2.69
287 288 2.686915 CTGCTGAGTTCAATGGGAATCC 59.313 50.000 0.00 0.00 37.93 3.01
288 289 2.098770 GCTGCTGAGTTCAATGGGAATC 59.901 50.000 0.00 0.00 37.93 2.52
289 290 2.097825 GCTGCTGAGTTCAATGGGAAT 58.902 47.619 0.00 0.00 37.93 3.01
290 291 1.538047 GCTGCTGAGTTCAATGGGAA 58.462 50.000 0.00 0.00 0.00 3.97
291 292 0.674581 CGCTGCTGAGTTCAATGGGA 60.675 55.000 0.00 0.00 0.00 4.37
292 293 0.957395 ACGCTGCTGAGTTCAATGGG 60.957 55.000 0.00 0.00 0.00 4.00
293 294 1.725641 TACGCTGCTGAGTTCAATGG 58.274 50.000 5.15 0.00 0.00 3.16
294 295 2.995939 TCTTACGCTGCTGAGTTCAATG 59.004 45.455 5.15 0.00 0.00 2.82
295 296 3.319137 TCTTACGCTGCTGAGTTCAAT 57.681 42.857 5.15 0.00 0.00 2.57
296 297 2.812358 TCTTACGCTGCTGAGTTCAA 57.188 45.000 5.15 0.00 0.00 2.69
308 309 4.092968 AGTTCATTTCCACGAATCTTACGC 59.907 41.667 0.00 0.00 0.00 4.42
310 311 6.543736 GGAAGTTCATTTCCACGAATCTTAC 58.456 40.000 5.01 0.00 44.90 2.34
318 319 2.096417 GTCACGGAAGTTCATTTCCACG 60.096 50.000 5.01 0.00 46.40 4.94
333 334 6.467682 CGACAAAAATTAATGTATGGTCACGG 59.532 38.462 0.00 0.00 0.00 4.94
339 340 8.846211 AGGGTATCGACAAAAATTAATGTATGG 58.154 33.333 0.00 0.00 0.00 2.74
349 350 7.441458 GTCTAGCATAAGGGTATCGACAAAAAT 59.559 37.037 0.00 0.00 29.73 1.82
357 358 6.223852 ACATTTGTCTAGCATAAGGGTATCG 58.776 40.000 0.00 0.00 0.00 2.92
365 366 9.612066 TGATGACATTACATTTGTCTAGCATAA 57.388 29.630 5.52 0.00 43.12 1.90
375 376 6.182039 ACTCGGTTGATGACATTACATTTG 57.818 37.500 0.00 0.00 0.00 2.32
376 377 7.389330 TGTTACTCGGTTGATGACATTACATTT 59.611 33.333 0.00 0.00 0.00 2.32
416 417 9.052759 ACAAACACTGAGAATATCGTAGTTTTT 57.947 29.630 0.00 0.00 0.00 1.94
417 418 8.495949 CACAAACACTGAGAATATCGTAGTTTT 58.504 33.333 0.00 0.00 0.00 2.43
418 419 7.117812 CCACAAACACTGAGAATATCGTAGTTT 59.882 37.037 0.00 0.00 0.00 2.66
419 420 6.590292 CCACAAACACTGAGAATATCGTAGTT 59.410 38.462 0.00 0.00 0.00 2.24
420 421 6.100004 CCACAAACACTGAGAATATCGTAGT 58.900 40.000 0.00 0.00 0.00 2.73
421 422 6.100004 ACCACAAACACTGAGAATATCGTAG 58.900 40.000 0.00 0.00 0.00 3.51
422 423 6.032956 ACCACAAACACTGAGAATATCGTA 57.967 37.500 0.00 0.00 0.00 3.43
426 427 6.294176 GCAAAGACCACAAACACTGAGAATAT 60.294 38.462 0.00 0.00 0.00 1.28
431 432 2.684881 AGCAAAGACCACAAACACTGAG 59.315 45.455 0.00 0.00 0.00 3.35
432 433 2.722094 AGCAAAGACCACAAACACTGA 58.278 42.857 0.00 0.00 0.00 3.41
435 436 4.787598 CTCATAGCAAAGACCACAAACAC 58.212 43.478 0.00 0.00 0.00 3.32
459 460 4.379339 TTGGCGTTTAAAAAGAAGTGCT 57.621 36.364 0.00 0.00 0.00 4.40
487 488 3.350833 GAAGGGTCGGTGAGAACTAGTA 58.649 50.000 0.00 0.00 36.61 1.82
504 505 0.108615 ATGCGAGTCTTGGACGAAGG 60.109 55.000 0.00 0.00 37.67 3.46
509 510 2.158957 TCCCATAATGCGAGTCTTGGAC 60.159 50.000 0.00 0.00 0.00 4.02
520 521 6.017400 ACGATTTGATTGATCCCATAATGC 57.983 37.500 0.00 0.00 0.00 3.56
547 548 4.224147 GGGGTGGTGCCATTATTTAGTTTT 59.776 41.667 0.00 0.00 39.65 2.43
549 550 3.012388 AGGGGTGGTGCCATTATTTAGTT 59.988 43.478 0.00 0.00 39.65 2.24
550 551 2.585432 AGGGGTGGTGCCATTATTTAGT 59.415 45.455 0.00 0.00 39.65 2.24
580 581 4.474651 TCTGAATAGGGTGGTGATGACAAT 59.525 41.667 0.00 0.00 0.00 2.71
581 582 3.843619 TCTGAATAGGGTGGTGATGACAA 59.156 43.478 0.00 0.00 0.00 3.18
582 583 3.197766 GTCTGAATAGGGTGGTGATGACA 59.802 47.826 0.00 0.00 0.00 3.58
583 584 3.452627 AGTCTGAATAGGGTGGTGATGAC 59.547 47.826 0.00 0.00 0.00 3.06
584 585 3.724478 AGTCTGAATAGGGTGGTGATGA 58.276 45.455 0.00 0.00 0.00 2.92
585 586 4.651503 ACTAGTCTGAATAGGGTGGTGATG 59.348 45.833 15.63 0.00 0.00 3.07
586 587 4.884961 ACTAGTCTGAATAGGGTGGTGAT 58.115 43.478 15.63 0.00 0.00 3.06
593 594 5.363868 TGGATCACAACTAGTCTGAATAGGG 59.636 44.000 15.63 9.96 0.00 3.53
670 679 9.745018 AGAATCCTCTATGATTTTCAAACTTCA 57.255 29.630 0.00 0.00 35.15 3.02
674 683 9.080915 GCAAAGAATCCTCTATGATTTTCAAAC 57.919 33.333 0.00 0.00 35.15 2.93
684 693 3.313526 CGGTTGGCAAAGAATCCTCTATG 59.686 47.826 0.00 0.00 0.00 2.23
685 694 3.199946 TCGGTTGGCAAAGAATCCTCTAT 59.800 43.478 0.00 0.00 0.00 1.98
705 714 2.359900 CCAGGTCCAAATCCTCTTTCG 58.640 52.381 0.00 0.00 32.37 3.46
712 721 2.106683 CGTCGCCAGGTCCAAATCC 61.107 63.158 0.00 0.00 0.00 3.01
724 1397 0.659711 GATCTACTTACGCCGTCGCC 60.660 60.000 0.00 0.00 39.84 5.54
757 1430 3.260740 GCAAAAATGCAATCCGATCCAA 58.739 40.909 0.00 0.00 34.41 3.53
773 1446 5.453198 GGGACTCCAAAGAAAGAATGCAAAA 60.453 40.000 0.00 0.00 0.00 2.44
783 1456 2.091885 ACAAGCAGGGACTCCAAAGAAA 60.092 45.455 0.00 0.00 34.60 2.52
784 1457 1.494721 ACAAGCAGGGACTCCAAAGAA 59.505 47.619 0.00 0.00 34.60 2.52
792 1465 4.524328 CCTTGATTTTTACAAGCAGGGACT 59.476 41.667 0.00 0.00 42.03 3.85
795 1468 3.055891 CCCCTTGATTTTTACAAGCAGGG 60.056 47.826 0.00 0.00 42.03 4.45
834 1507 1.610379 AGCAGGGCCCAAATGGAAC 60.610 57.895 27.56 3.26 37.39 3.62
837 1510 0.614415 TTACAGCAGGGCCCAAATGG 60.614 55.000 27.56 11.87 37.09 3.16
863 1536 2.042259 AGCGGTGTCGGTGATACGA 61.042 57.895 0.00 0.00 45.98 3.43
873 1546 2.028883 GCATTAAACGTAGAGCGGTGTC 59.971 50.000 0.00 0.00 41.21 3.67
874 1547 1.997606 GCATTAAACGTAGAGCGGTGT 59.002 47.619 0.00 0.00 41.21 4.16
875 1548 1.996898 TGCATTAAACGTAGAGCGGTG 59.003 47.619 0.00 0.00 41.21 4.94
876 1549 2.268298 CTGCATTAAACGTAGAGCGGT 58.732 47.619 0.00 0.00 45.91 5.68
877 1550 1.004927 GCTGCATTAAACGTAGAGCGG 60.005 52.381 0.00 0.00 46.52 5.52
947 1625 1.348036 AGACCTAGCCGCTTGAAAGTT 59.652 47.619 0.00 0.00 0.00 2.66
952 1630 3.617368 GGAGACCTAGCCGCTTGA 58.383 61.111 0.00 0.00 0.00 3.02
1675 2400 3.652057 ACAGATAAACCCATCCACCAG 57.348 47.619 0.00 0.00 0.00 4.00
2205 4055 2.038557 ACGGTCACACAAGAATAGGCTT 59.961 45.455 0.00 0.00 0.00 4.35
2287 4152 3.659183 AACAATCCAATCCTCTCAGGG 57.341 47.619 0.00 0.00 35.59 4.45
2308 4173 8.040727 ACCGATAGCATATATTCACAGCATTAA 58.959 33.333 0.00 0.00 0.00 1.40
2311 4176 5.982356 ACCGATAGCATATATTCACAGCAT 58.018 37.500 0.00 0.00 0.00 3.79
2374 4242 3.188460 GGTTTTCTGCAATTCACTCGCTA 59.812 43.478 0.00 0.00 0.00 4.26
2375 4243 2.030805 GGTTTTCTGCAATTCACTCGCT 60.031 45.455 0.00 0.00 0.00 4.93
2376 4244 2.287547 TGGTTTTCTGCAATTCACTCGC 60.288 45.455 0.00 0.00 0.00 5.03
3351 5845 1.429299 CTCCCCTCCCTGGAAGTTTTT 59.571 52.381 0.00 0.00 38.35 1.94
3359 5853 0.327964 AAATCTCCTCCCCTCCCTGG 60.328 60.000 0.00 0.00 0.00 4.45
3407 5974 0.918983 CAGATGGAGCCCACCCTTTA 59.081 55.000 0.00 0.00 35.80 1.85
3576 6143 1.202463 CGTTGCCAGCTCTGCTACTAT 60.202 52.381 14.39 0.00 36.40 2.12
3619 6186 2.494073 AGTAGTTGAGGCTGTCTGCTAC 59.506 50.000 0.00 0.00 42.39 3.58
3670 6245 6.116126 ACAGAAACCCTCATGCTATAAGTTC 58.884 40.000 0.00 0.00 0.00 3.01
3907 7222 1.286305 AACACCACACCTGGGTTCCT 61.286 55.000 0.00 0.00 42.74 3.36
4046 7368 4.099881 TCACTAACTTTTCACTACACCCGT 59.900 41.667 0.00 0.00 0.00 5.28
4068 7390 3.149196 TGAGTCAAATGCAAAGACCCTC 58.851 45.455 11.48 4.81 32.82 4.30
4106 7428 1.413077 AGCTACCTAAACGGATCCTGC 59.587 52.381 10.75 0.53 36.31 4.85
4107 7429 2.224066 CCAGCTACCTAAACGGATCCTG 60.224 54.545 10.75 6.11 36.31 3.86
4244 7589 2.095059 CACAACTTGAAGCCAGTATGCC 60.095 50.000 0.00 0.00 31.97 4.40
4282 7636 0.603065 GCCCGCTCCATTCTTGTTTT 59.397 50.000 0.00 0.00 0.00 2.43
4297 7651 2.353889 CTCTTGTTGATGAAGATGCCCG 59.646 50.000 0.00 0.00 0.00 6.13
4298 7652 2.098770 GCTCTTGTTGATGAAGATGCCC 59.901 50.000 0.00 0.00 0.00 5.36
4322 7695 2.621070 ACATCTACCACTCCACACCTT 58.379 47.619 0.00 0.00 0.00 3.50
4343 7716 1.993391 CCGGTCCCCTTGCCTCTTA 60.993 63.158 0.00 0.00 0.00 2.10
4373 7747 5.157395 ACTAAGTCCCCAACTACCAACTTA 58.843 41.667 0.00 0.00 37.17 2.24
4719 8093 3.844211 TCTTGCCAATAGGTACACTCCTT 59.156 43.478 0.00 0.00 38.86 3.36
4835 8229 3.044894 AGGCTAGAGCAAAGCTTAGGAT 58.955 45.455 0.00 0.00 39.88 3.24
4955 8350 1.543802 ACGCCTGTCTTCTCTTCTCTG 59.456 52.381 0.00 0.00 0.00 3.35
4979 8374 6.202954 CCAGGTATCACTTTAAAATCTAGGCG 59.797 42.308 0.00 0.00 0.00 5.52
4993 8389 3.511477 ACAACACTCTCCAGGTATCACT 58.489 45.455 0.00 0.00 0.00 3.41
5052 8454 2.325583 TCCCGCTGGACATGAATAAC 57.674 50.000 0.00 0.00 35.03 1.89
5053 8455 4.698201 TTATCCCGCTGGACATGAATAA 57.302 40.909 0.00 0.00 45.58 1.40
5087 8490 3.883489 GCTTCCACCACTTTGTTCTAGTT 59.117 43.478 0.00 0.00 0.00 2.24
5190 8619 5.057843 AGTTGCCATCTTCATCCACATAT 57.942 39.130 0.00 0.00 0.00 1.78
5265 8709 7.444487 CCACCAGGTATATTTAACTTAGCTTCC 59.556 40.741 0.00 0.00 0.00 3.46
5309 8753 8.619546 CAATCTTTCTTCTCCTTAATAGCCTTG 58.380 37.037 0.00 0.00 0.00 3.61
5422 8976 0.535102 AACCCCTTGCTTCACTCACG 60.535 55.000 0.00 0.00 0.00 4.35
5441 8995 3.181447 CGGTAGAGGTCCTCATACACCTA 60.181 52.174 21.26 0.00 43.52 3.08
5466 9026 6.881065 TGTCCCTTTCATCTTCATGTCTAAAG 59.119 38.462 0.00 0.00 0.00 1.85
5480 9044 9.170890 TGGTAATCTTATAGATGTCCCTTTCAT 57.829 33.333 0.00 0.00 34.65 2.57
5502 9067 5.071370 GTCTTCCTATCTCGGATCTTGGTA 58.929 45.833 0.00 0.00 32.02 3.25
5607 9173 1.022735 GCTTGTCGAGATACTCCCGA 58.977 55.000 0.00 0.00 0.00 5.14
5649 9217 2.158842 GGTCAGCCAGCTCAATGATAGT 60.159 50.000 0.00 0.00 34.09 2.12
5665 9233 4.588899 TGTTTGTATCATCAAGGGGTCAG 58.411 43.478 0.00 0.00 0.00 3.51
5721 9291 3.169512 TCCTTTTTAAAGCCCTCCTGG 57.830 47.619 0.00 0.00 34.69 4.45
5727 9297 5.337571 CCTCCTTTCATCCTTTTTAAAGCCC 60.338 44.000 0.00 0.00 34.69 5.19
5789 9363 2.238521 CTATGTCCTGAGGCCTCTCTC 58.761 57.143 32.28 19.42 40.58 3.20
5790 9364 1.757405 GCTATGTCCTGAGGCCTCTCT 60.757 57.143 32.28 13.14 40.58 3.10
5835 9415 3.504520 TGTTAGCCCGAAAATTGAGGTTC 59.495 43.478 0.00 0.00 0.00 3.62
5869 9449 5.407407 ACTAATATACTCCGCCTCCATTG 57.593 43.478 0.00 0.00 0.00 2.82
5907 9487 5.521696 AGTACAACTTTAAACACCCCCTTT 58.478 37.500 0.00 0.00 0.00 3.11
6030 9613 1.318158 GCTCCCAGGCATGAAACCAG 61.318 60.000 0.00 0.00 0.00 4.00
6049 9632 3.758554 AGAAAATGGTTTCCATGGTCGAG 59.241 43.478 12.58 0.00 44.40 4.04
6182 9771 3.288092 GGACTTTGTGTTTCTCCAAGGT 58.712 45.455 0.00 0.00 34.10 3.50
6241 9830 5.861251 TGTTCAAACACTTGTCACAACATTC 59.139 36.000 0.00 0.00 32.37 2.67
6306 9908 2.825836 GGGCTGATCCTTGGTGCG 60.826 66.667 0.00 0.00 34.39 5.34
6342 9962 3.184628 TCTCCTTGTGACCTCATCCATT 58.815 45.455 0.00 0.00 0.00 3.16
6493 10133 5.105997 ACTGAAACCGTACCTCATGTACTAC 60.106 44.000 0.00 0.00 46.36 2.73
6507 10148 4.614535 CGTTGCTAGTAGTACTGAAACCGT 60.615 45.833 13.29 0.00 0.00 4.83
6527 10168 0.325390 CTAACCTCCTCCCCCTCGTT 60.325 60.000 0.00 0.00 0.00 3.85
6559 10210 1.823610 GCGTCCTTCTAAGGTACCACT 59.176 52.381 15.94 2.92 46.54 4.00
6578 10229 5.567423 GCATTGACCCCAAATATCATAAGGC 60.567 44.000 0.00 0.00 35.67 4.35
6584 10235 2.694628 GCAGCATTGACCCCAAATATCA 59.305 45.455 0.00 0.00 35.67 2.15
6634 10285 0.673644 CGGGTTTGACTCGATGGCTT 60.674 55.000 0.00 0.00 46.98 4.35
6644 10295 3.081804 ACTTCATCCATTCGGGTTTGAC 58.918 45.455 0.00 0.00 38.11 3.18
6704 10364 3.993920 ACCCGTCTTTTAGCTTTTACGA 58.006 40.909 0.00 0.00 32.35 3.43
6707 10367 7.983484 CCTATAGAACCCGTCTTTTAGCTTTTA 59.017 37.037 0.00 0.00 37.84 1.52
6720 10380 0.396139 TGCCGTCCTATAGAACCCGT 60.396 55.000 0.00 0.00 0.00 5.28
6722 10382 1.411041 ACTGCCGTCCTATAGAACCC 58.589 55.000 0.00 0.00 0.00 4.11
6748 10408 1.662517 TCGCGCCATACAACATCATT 58.337 45.000 0.00 0.00 0.00 2.57
6824 10485 4.038522 CGATCCTACACATCCATCTCAACT 59.961 45.833 0.00 0.00 0.00 3.16
7036 10722 2.576191 TGGCAGGTGGATAGCTAACTTT 59.424 45.455 0.00 0.00 32.36 2.66
7037 10723 2.171448 CTGGCAGGTGGATAGCTAACTT 59.829 50.000 6.61 0.00 32.36 2.66
7039 10725 1.762957 TCTGGCAGGTGGATAGCTAAC 59.237 52.381 15.73 0.00 32.36 2.34
7040 10726 2.042464 CTCTGGCAGGTGGATAGCTAA 58.958 52.381 15.73 0.00 32.36 3.09
7042 10728 1.694133 GCTCTGGCAGGTGGATAGCT 61.694 60.000 15.73 0.00 38.54 3.32
7043 10729 1.227793 GCTCTGGCAGGTGGATAGC 60.228 63.158 15.73 11.22 38.54 2.97
7044 10730 1.340399 TGGCTCTGGCAGGTGGATAG 61.340 60.000 15.73 4.38 40.87 2.08
7045 10731 0.695462 ATGGCTCTGGCAGGTGGATA 60.695 55.000 15.73 0.00 42.43 2.59
7046 10732 2.005266 ATGGCTCTGGCAGGTGGAT 61.005 57.895 15.73 0.00 42.43 3.41
7047 10733 2.611800 ATGGCTCTGGCAGGTGGA 60.612 61.111 15.73 0.00 42.43 4.02
7048 10734 2.439701 CATGGCTCTGGCAGGTGG 60.440 66.667 15.73 6.67 42.43 4.61
7049 10735 1.451567 CTCATGGCTCTGGCAGGTG 60.452 63.158 15.73 9.26 42.43 4.00
7050 10736 1.495579 AACTCATGGCTCTGGCAGGT 61.496 55.000 15.73 0.00 42.43 4.00
7051 10737 1.030488 CAACTCATGGCTCTGGCAGG 61.030 60.000 15.73 6.64 42.43 4.85
7052 10738 1.030488 CCAACTCATGGCTCTGGCAG 61.030 60.000 8.58 8.58 43.80 4.85
7053 10739 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
7054 10740 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
7062 10748 2.611518 GTCTCTCGGAACCAACTCATG 58.388 52.381 0.00 0.00 0.00 3.07
7063 10749 1.550976 GGTCTCTCGGAACCAACTCAT 59.449 52.381 0.00 0.00 0.00 2.90
7064 10750 0.966920 GGTCTCTCGGAACCAACTCA 59.033 55.000 0.00 0.00 0.00 3.41
7065 10751 1.067495 CAGGTCTCTCGGAACCAACTC 60.067 57.143 0.55 0.00 30.45 3.01
7066 10752 0.969894 CAGGTCTCTCGGAACCAACT 59.030 55.000 0.55 0.00 30.45 3.16
7067 10753 0.966920 TCAGGTCTCTCGGAACCAAC 59.033 55.000 0.55 0.00 30.45 3.77
7068 10754 1.618837 CTTCAGGTCTCTCGGAACCAA 59.381 52.381 0.55 0.00 30.45 3.67
7069 10755 1.257743 CTTCAGGTCTCTCGGAACCA 58.742 55.000 0.55 0.00 30.45 3.67
7070 10756 0.533032 CCTTCAGGTCTCTCGGAACC 59.467 60.000 0.00 0.00 30.45 3.62
7071 10757 1.546961 TCCTTCAGGTCTCTCGGAAC 58.453 55.000 0.00 0.00 36.34 3.62
7072 10758 2.497675 CAATCCTTCAGGTCTCTCGGAA 59.502 50.000 0.00 0.00 36.34 4.30
7073 10759 2.103373 CAATCCTTCAGGTCTCTCGGA 58.897 52.381 0.00 0.00 36.34 4.55
7074 10760 1.137872 CCAATCCTTCAGGTCTCTCGG 59.862 57.143 0.00 0.00 36.34 4.63
7075 10761 2.103373 TCCAATCCTTCAGGTCTCTCG 58.897 52.381 0.00 0.00 36.34 4.04
7144 10835 1.030488 CCAACTCATGGCTCTGGCAG 61.030 60.000 8.58 8.58 43.80 4.85
7184 10875 3.771071 AGTTGGGGTAGGCTAGAGTTA 57.229 47.619 0.00 0.00 0.00 2.24
7303 10994 7.781548 AAATGCATAAGGAGAATGAAAATGC 57.218 32.000 0.00 0.00 38.90 3.56
7406 11098 3.466836 AGTCGAAGCTTGAATGACACAA 58.533 40.909 2.10 0.00 32.08 3.33
7409 11101 2.731451 CGAAGTCGAAGCTTGAATGACA 59.269 45.455 2.10 0.00 43.02 3.58
7423 11144 6.134730 GTGTACTATCCAATAGTCGAAGTCG 58.865 44.000 2.99 0.00 44.55 4.18
7434 11155 7.297936 TGGATAATCGTGTGTACTATCCAAT 57.702 36.000 12.84 0.00 43.10 3.16
7458 11182 5.307976 TGCAAGAGGTTAGATAGTGCCATAT 59.692 40.000 0.00 0.00 0.00 1.78
7586 11528 1.939934 CTGACTGTTTTTGGACGCTGA 59.060 47.619 0.00 0.00 0.00 4.26
7590 11532 2.549754 AGATGCTGACTGTTTTTGGACG 59.450 45.455 0.00 0.00 0.00 4.79
7713 11668 8.549338 AAAGGGTTACGATCTAAGAGAAAAAG 57.451 34.615 0.00 0.00 0.00 2.27
7865 11823 6.920695 AAGGTTTTAGGGGGTTATAGTGAT 57.079 37.500 0.00 0.00 0.00 3.06
7953 11931 7.707104 AGATTTGATGGAATAAACGATGGTTC 58.293 34.615 0.00 0.00 34.62 3.62
8025 12008 7.119992 TCGCTGCCATTTAGAACACTTTAAATA 59.880 33.333 0.00 0.00 30.50 1.40
8258 12355 3.126831 GTTATGAGGACAGATGAAGCCG 58.873 50.000 0.00 0.00 0.00 5.52
8289 12386 8.517878 TCCTTAATCAAAGCTTCTTTGAATGAG 58.482 33.333 21.23 18.36 41.16 2.90
8425 12522 2.095008 TCAAGACACGATCTCTCACAGC 60.095 50.000 0.00 0.00 36.27 4.40
8451 12581 3.367395 CGTAGAATTCAGAGTCTGCACCA 60.367 47.826 15.72 0.00 33.05 4.17
8514 12650 1.939980 AAGCTCTCCGTAACTTCCCT 58.060 50.000 0.00 0.00 0.00 4.20
8624 12765 6.049149 ACATACATGAAACTTAGCGCATACT 58.951 36.000 11.47 0.00 0.00 2.12
8698 12918 1.463056 CAGTCGTTGCCGCTTCAATTA 59.537 47.619 0.00 0.00 0.00 1.40
8706 12926 0.094730 GATGTTACAGTCGTTGCCGC 59.905 55.000 0.00 0.00 0.00 6.53
8710 12930 6.093404 AGTACTGATGATGTTACAGTCGTTG 58.907 40.000 0.00 0.00 42.65 4.10
8713 12933 6.125327 AGAGTACTGATGATGTTACAGTCG 57.875 41.667 0.00 0.00 42.65 4.18
8793 13013 2.936498 GGTACGGGTCATCTGTGAAATG 59.064 50.000 0.00 0.00 35.80 2.32
8831 13051 5.764686 AGACACAAATATGAAGCACTTGTGA 59.235 36.000 17.01 0.00 46.22 3.58
8836 13066 8.798859 AGATAAAGACACAAATATGAAGCACT 57.201 30.769 0.00 0.00 0.00 4.40
8858 13088 7.283127 ACAAAAGGTGCACATAATCGATTAGAT 59.717 33.333 21.55 10.42 42.43 1.98
8865 13095 6.523676 AAAAACAAAAGGTGCACATAATCG 57.476 33.333 20.43 3.91 0.00 3.34
8912 13143 4.249661 TCACTCGCACATAAATGCACTTA 58.750 39.130 0.00 0.00 46.47 2.24
8925 13156 3.059884 TGATCTTCAAACTCACTCGCAC 58.940 45.455 0.00 0.00 0.00 5.34
8943 13174 9.836864 ACATCCACACGCATTTATATATATGAT 57.163 29.630 15.05 2.20 0.00 2.45
8944 13175 9.665719 AACATCCACACGCATTTATATATATGA 57.334 29.630 15.05 0.00 0.00 2.15
8945 13176 9.920826 GAACATCCACACGCATTTATATATATG 57.079 33.333 5.44 8.38 0.00 1.78
8951 13182 6.150307 ACAAAGAACATCCACACGCATTTATA 59.850 34.615 0.00 0.00 0.00 0.98
8959 13190 3.961477 TGAACAAAGAACATCCACACG 57.039 42.857 0.00 0.00 0.00 4.49
8965 13196 8.976986 AAAGCTTATCATGAACAAAGAACATC 57.023 30.769 16.00 2.82 0.00 3.06
8966 13197 9.768662 AAAAAGCTTATCATGAACAAAGAACAT 57.231 25.926 16.00 0.00 0.00 2.71
8993 13224 2.022240 GCAACAGTCCCCGCCAAAAA 62.022 55.000 0.00 0.00 0.00 1.94
8994 13225 2.494530 GCAACAGTCCCCGCCAAAA 61.495 57.895 0.00 0.00 0.00 2.44
8996 13227 2.130821 TATGCAACAGTCCCCGCCAA 62.131 55.000 0.00 0.00 0.00 4.52
8997 13228 2.130821 TTATGCAACAGTCCCCGCCA 62.131 55.000 0.00 0.00 0.00 5.69
8998 13229 0.751643 ATTATGCAACAGTCCCCGCC 60.752 55.000 0.00 0.00 0.00 6.13
8999 13230 1.961793 TATTATGCAACAGTCCCCGC 58.038 50.000 0.00 0.00 0.00 6.13
9000 13231 2.290641 GCTTATTATGCAACAGTCCCCG 59.709 50.000 0.00 0.00 0.00 5.73
9002 13233 4.981806 TTGCTTATTATGCAACAGTCCC 57.018 40.909 11.70 0.00 44.24 4.46
9009 13240 7.835822 AGTTACCATGTTTGCTTATTATGCAA 58.164 30.769 11.70 11.70 46.90 4.08
9011 13242 8.702163 AAAGTTACCATGTTTGCTTATTATGC 57.298 30.769 0.00 0.00 0.00 3.14
9015 13246 9.691362 CTACAAAAGTTACCATGTTTGCTTATT 57.309 29.630 4.60 0.00 34.94 1.40
9017 13248 7.142680 GCTACAAAAGTTACCATGTTTGCTTA 58.857 34.615 4.60 0.00 34.94 3.09
9018 13249 5.983118 GCTACAAAAGTTACCATGTTTGCTT 59.017 36.000 4.60 0.00 34.94 3.91
9019 13250 5.508994 GGCTACAAAAGTTACCATGTTTGCT 60.509 40.000 4.60 0.00 34.94 3.91
9020 13251 4.684242 GGCTACAAAAGTTACCATGTTTGC 59.316 41.667 4.60 0.00 34.94 3.68
9021 13252 6.084326 AGGCTACAAAAGTTACCATGTTTG 57.916 37.500 3.43 3.43 37.08 2.93
9022 13253 6.724893 AAGGCTACAAAAGTTACCATGTTT 57.275 33.333 0.00 0.00 0.00 2.83
9045 13337 9.405587 GCACAGCTATGACTTTAACATTAAAAA 57.594 29.630 0.00 0.00 32.73 1.94
9048 13340 7.626240 GCAGCACAGCTATGACTTTAACATTAA 60.626 37.037 0.00 0.00 36.40 1.40
9049 13341 6.183360 GCAGCACAGCTATGACTTTAACATTA 60.183 38.462 0.00 0.00 36.40 1.90
9050 13342 5.392380 GCAGCACAGCTATGACTTTAACATT 60.392 40.000 0.00 0.00 36.40 2.71
9051 13343 4.095483 GCAGCACAGCTATGACTTTAACAT 59.905 41.667 0.00 0.00 36.40 2.71
9053 13345 3.686726 AGCAGCACAGCTATGACTTTAAC 59.313 43.478 0.00 0.00 44.50 2.01
9054 13346 3.942829 AGCAGCACAGCTATGACTTTAA 58.057 40.909 0.00 0.00 44.50 1.52
9055 13347 3.616956 AGCAGCACAGCTATGACTTTA 57.383 42.857 0.00 0.00 44.50 1.85
9056 13348 2.486472 AGCAGCACAGCTATGACTTT 57.514 45.000 0.00 0.00 44.50 2.66
9064 13356 5.567224 TTTTGCATAAAATAGCAGCACAGCT 60.567 36.000 0.00 3.82 42.39 4.24
9065 13357 3.425577 TGCATAAAATAGCAGCACAGC 57.574 42.857 0.00 0.00 35.51 4.40
9066 13358 6.532302 TGATTTTGCATAAAATAGCAGCACAG 59.468 34.615 0.00 0.00 44.35 3.66
9067 13359 6.310956 GTGATTTTGCATAAAATAGCAGCACA 59.689 34.615 0.00 0.00 44.35 4.57
9068 13360 6.237915 GGTGATTTTGCATAAAATAGCAGCAC 60.238 38.462 0.00 6.84 44.35 4.40
9069 13361 5.811613 GGTGATTTTGCATAAAATAGCAGCA 59.188 36.000 0.00 0.00 44.35 4.41
9070 13362 5.811613 TGGTGATTTTGCATAAAATAGCAGC 59.188 36.000 0.00 3.08 44.35 5.25
9071 13363 7.830940 TTGGTGATTTTGCATAAAATAGCAG 57.169 32.000 0.00 0.00 44.35 4.24
9072 13364 7.333921 CCTTTGGTGATTTTGCATAAAATAGCA 59.666 33.333 0.00 0.00 44.35 3.49
9073 13365 7.548780 TCCTTTGGTGATTTTGCATAAAATAGC 59.451 33.333 0.00 0.00 44.35 2.97
9074 13366 8.872845 GTCCTTTGGTGATTTTGCATAAAATAG 58.127 33.333 0.00 0.00 44.35 1.73
9075 13367 8.592809 AGTCCTTTGGTGATTTTGCATAAAATA 58.407 29.630 0.00 0.00 44.35 1.40
9077 13369 6.825610 AGTCCTTTGGTGATTTTGCATAAAA 58.174 32.000 0.00 0.00 39.86 1.52
9079 13371 7.531857 TTAGTCCTTTGGTGATTTTGCATAA 57.468 32.000 0.00 0.00 0.00 1.90
9080 13372 7.531857 TTTAGTCCTTTGGTGATTTTGCATA 57.468 32.000 0.00 0.00 0.00 3.14
9081 13373 6.418057 TTTAGTCCTTTGGTGATTTTGCAT 57.582 33.333 0.00 0.00 0.00 3.96
9082 13374 5.860941 TTTAGTCCTTTGGTGATTTTGCA 57.139 34.783 0.00 0.00 0.00 4.08
9083 13375 5.639082 CCATTTAGTCCTTTGGTGATTTTGC 59.361 40.000 0.00 0.00 0.00 3.68
9084 13376 6.758254 ACCATTTAGTCCTTTGGTGATTTTG 58.242 36.000 0.00 0.00 40.87 2.44
9085 13377 6.994421 ACCATTTAGTCCTTTGGTGATTTT 57.006 33.333 0.00 0.00 40.87 1.82
9086 13378 6.994421 AACCATTTAGTCCTTTGGTGATTT 57.006 33.333 0.00 0.00 41.53 2.17
9087 13379 6.663523 CCTAACCATTTAGTCCTTTGGTGATT 59.336 38.462 0.00 0.00 41.53 2.57
9088 13380 6.187682 CCTAACCATTTAGTCCTTTGGTGAT 58.812 40.000 0.00 0.00 41.53 3.06
9091 13383 5.594199 ACCTAACCATTTAGTCCTTTGGT 57.406 39.130 0.00 0.00 44.20 3.67
9093 13385 7.284919 ACAAACCTAACCATTTAGTCCTTTG 57.715 36.000 0.00 0.00 33.92 2.77
9094 13386 7.562088 TGAACAAACCTAACCATTTAGTCCTTT 59.438 33.333 0.00 0.00 33.92 3.11
9097 13389 6.072119 CCTGAACAAACCTAACCATTTAGTCC 60.072 42.308 0.00 0.00 33.92 3.85
9098 13390 6.489022 ACCTGAACAAACCTAACCATTTAGTC 59.511 38.462 0.00 0.00 33.92 2.59
9099 13391 6.370453 ACCTGAACAAACCTAACCATTTAGT 58.630 36.000 0.00 0.00 33.92 2.24
9100 13392 6.894339 ACCTGAACAAACCTAACCATTTAG 57.106 37.500 0.00 0.00 35.35 1.85
9101 13393 6.461788 GCAACCTGAACAAACCTAACCATTTA 60.462 38.462 0.00 0.00 0.00 1.40
9102 13394 5.683770 GCAACCTGAACAAACCTAACCATTT 60.684 40.000 0.00 0.00 0.00 2.32
9104 13396 3.320826 GCAACCTGAACAAACCTAACCAT 59.679 43.478 0.00 0.00 0.00 3.55
9105 13397 2.691011 GCAACCTGAACAAACCTAACCA 59.309 45.455 0.00 0.00 0.00 3.67
9106 13398 2.691011 TGCAACCTGAACAAACCTAACC 59.309 45.455 0.00 0.00 0.00 2.85
9108 13400 2.360801 GCTGCAACCTGAACAAACCTAA 59.639 45.455 0.00 0.00 0.00 2.69
9110 13402 0.746659 GCTGCAACCTGAACAAACCT 59.253 50.000 0.00 0.00 0.00 3.50
9111 13403 0.459489 TGCTGCAACCTGAACAAACC 59.541 50.000 0.00 0.00 0.00 3.27
9112 13404 2.292103 TTGCTGCAACCTGAACAAAC 57.708 45.000 11.69 0.00 0.00 2.93
9113 13405 3.260740 CTTTTGCTGCAACCTGAACAAA 58.739 40.909 15.72 3.19 0.00 2.83
9114 13406 2.891112 CTTTTGCTGCAACCTGAACAA 58.109 42.857 15.72 3.94 0.00 2.83
9116 13408 1.211743 GCTTTTGCTGCAACCTGAAC 58.788 50.000 15.72 0.00 43.35 3.18
9117 13409 3.665544 GCTTTTGCTGCAACCTGAA 57.334 47.368 15.72 5.82 43.35 3.02
9154 13446 3.064820 GTGCACGTTCCAGAGAAGAAAAA 59.935 43.478 0.00 0.00 30.91 1.94
9156 13448 2.210116 GTGCACGTTCCAGAGAAGAAA 58.790 47.619 0.00 0.00 30.91 2.52
9158 13450 0.033504 GGTGCACGTTCCAGAGAAGA 59.966 55.000 11.45 0.00 30.91 2.87
9159 13451 0.249868 TGGTGCACGTTCCAGAGAAG 60.250 55.000 11.45 0.00 30.91 2.85
9160 13452 0.179234 TTGGTGCACGTTCCAGAGAA 59.821 50.000 11.45 0.00 35.05 2.87
9161 13453 0.179234 TTTGGTGCACGTTCCAGAGA 59.821 50.000 11.45 0.00 35.05 3.10
9164 13456 3.477504 CATTTGGTGCACGTTCCAG 57.522 52.632 11.45 0.00 35.05 3.86
9182 13474 1.804151 TCTCAGTACAAAATGCCGTGC 59.196 47.619 0.00 0.00 0.00 5.34
9184 13476 3.402628 ACTCTCAGTACAAAATGCCGT 57.597 42.857 0.00 0.00 0.00 5.68
9186 13478 7.062255 GCATTAAAACTCTCAGTACAAAATGCC 59.938 37.037 0.00 0.00 35.95 4.40
9187 13479 7.594758 TGCATTAAAACTCTCAGTACAAAATGC 59.405 33.333 0.00 0.00 38.82 3.56
9188 13480 9.121517 CTGCATTAAAACTCTCAGTACAAAATG 57.878 33.333 0.00 0.00 0.00 2.32
9189 13481 9.066892 TCTGCATTAAAACTCTCAGTACAAAAT 57.933 29.630 0.00 0.00 0.00 1.82
9191 13483 8.621532 ATCTGCATTAAAACTCTCAGTACAAA 57.378 30.769 0.00 0.00 0.00 2.83
9192 13484 8.621532 AATCTGCATTAAAACTCTCAGTACAA 57.378 30.769 0.00 0.00 0.00 2.41
9193 13485 9.890629 ATAATCTGCATTAAAACTCTCAGTACA 57.109 29.630 0.00 0.00 0.00 2.90
9196 13488 9.236006 ACAATAATCTGCATTAAAACTCTCAGT 57.764 29.630 0.00 0.00 0.00 3.41
9222 13514 7.866003 ACGAAAGTGGGCAAAATGCAGAAAA 62.866 40.000 4.57 0.00 45.21 2.29
9225 13517 3.593704 ACGAAAGTGGGCAAAATGCAGA 61.594 45.455 4.57 0.00 45.21 4.26
9226 13518 1.269726 ACGAAAGTGGGCAAAATGCAG 60.270 47.619 4.57 0.00 45.21 4.41
9227 13519 0.749649 ACGAAAGTGGGCAAAATGCA 59.250 45.000 4.57 0.00 45.21 3.96
9228 13520 3.586430 ACGAAAGTGGGCAAAATGC 57.414 47.368 0.00 0.00 46.97 3.56
9240 13532 6.196571 ACGAAAATCCTGTGTTAAACGAAAG 58.803 36.000 0.00 0.00 0.00 2.62
9242 13534 5.277442 GGACGAAAATCCTGTGTTAAACGAA 60.277 40.000 0.00 0.00 35.68 3.85
9243 13535 4.211794 GGACGAAAATCCTGTGTTAAACGA 59.788 41.667 0.00 0.00 35.68 3.85
9245 13537 5.427036 TGGACGAAAATCCTGTGTTAAAC 57.573 39.130 0.00 0.00 39.75 2.01
9246 13538 5.591067 AGTTGGACGAAAATCCTGTGTTAAA 59.409 36.000 0.00 0.00 39.75 1.52
9247 13539 5.127491 AGTTGGACGAAAATCCTGTGTTAA 58.873 37.500 0.00 0.00 39.75 2.01
9248 13540 4.710324 AGTTGGACGAAAATCCTGTGTTA 58.290 39.130 0.00 0.00 39.75 2.41
9249 13541 3.551846 AGTTGGACGAAAATCCTGTGTT 58.448 40.909 0.00 0.00 39.75 3.32
9250 13542 3.208747 AGTTGGACGAAAATCCTGTGT 57.791 42.857 0.00 0.00 39.75 3.72
9251 13543 3.563808 TGAAGTTGGACGAAAATCCTGTG 59.436 43.478 0.00 0.00 39.75 3.66
9252 13544 3.815809 TGAAGTTGGACGAAAATCCTGT 58.184 40.909 0.00 0.00 39.75 4.00
9253 13545 4.275936 AGTTGAAGTTGGACGAAAATCCTG 59.724 41.667 0.00 0.00 39.75 3.86
9255 13547 4.830826 AGTTGAAGTTGGACGAAAATCC 57.169 40.909 0.00 0.00 39.45 3.01
9259 13551 4.509616 TCTGAAGTTGAAGTTGGACGAAA 58.490 39.130 0.00 0.00 0.00 3.46
9260 13552 4.131649 TCTGAAGTTGAAGTTGGACGAA 57.868 40.909 0.00 0.00 0.00 3.85
9262 13554 4.458951 CTTCTGAAGTTGAAGTTGGACG 57.541 45.455 9.26 0.00 36.94 4.79
9278 13570 6.090898 CGGGTACTAGTTTCATTCAACTTCTG 59.909 42.308 0.00 0.00 38.07 3.02
9282 13574 5.337330 CCTCGGGTACTAGTTTCATTCAACT 60.337 44.000 0.00 0.00 40.28 3.16
9284 13576 4.081309 CCCTCGGGTACTAGTTTCATTCAA 60.081 45.833 0.00 0.00 0.00 2.69
9285 13577 3.449737 CCCTCGGGTACTAGTTTCATTCA 59.550 47.826 0.00 0.00 0.00 2.57
9287 13579 3.705072 CTCCCTCGGGTACTAGTTTCATT 59.295 47.826 0.00 0.00 36.47 2.57
9288 13580 3.297736 CTCCCTCGGGTACTAGTTTCAT 58.702 50.000 0.00 0.00 36.47 2.57
9292 13584 0.750911 CGCTCCCTCGGGTACTAGTT 60.751 60.000 0.00 0.00 36.47 2.24
9293 13585 1.153005 CGCTCCCTCGGGTACTAGT 60.153 63.158 0.00 0.00 36.47 2.57
9294 13586 2.553727 GCGCTCCCTCGGGTACTAG 61.554 68.421 0.00 0.00 36.47 2.57
9295 13587 2.517875 GCGCTCCCTCGGGTACTA 60.518 66.667 0.00 0.00 36.47 1.82
9296 13588 4.753662 TGCGCTCCCTCGGGTACT 62.754 66.667 9.73 0.00 36.47 2.73
9297 13589 4.208686 CTGCGCTCCCTCGGGTAC 62.209 72.222 9.73 0.00 36.47 3.34
9311 13603 1.666888 CCAAAATTCGGTGCACTCTGC 60.667 52.381 17.98 0.00 45.29 4.26
9312 13604 1.608590 ACCAAAATTCGGTGCACTCTG 59.391 47.619 17.98 7.36 34.69 3.35
9313 13605 1.880027 GACCAAAATTCGGTGCACTCT 59.120 47.619 17.98 0.00 36.69 3.24
9314 13606 1.880027 AGACCAAAATTCGGTGCACTC 59.120 47.619 17.98 6.02 36.69 3.51
9316 13608 1.399727 CGAGACCAAAATTCGGTGCAC 60.400 52.381 8.80 8.80 36.69 4.57
9317 13609 0.871722 CGAGACCAAAATTCGGTGCA 59.128 50.000 4.30 0.00 36.69 4.57
9318 13610 1.136057 GTCGAGACCAAAATTCGGTGC 60.136 52.381 4.30 0.00 36.69 5.01
9319 13611 1.126113 CGTCGAGACCAAAATTCGGTG 59.874 52.381 4.30 0.00 36.69 4.94
9320 13612 1.269936 ACGTCGAGACCAAAATTCGGT 60.270 47.619 0.00 0.00 40.30 4.69
9322 13614 1.790623 ACACGTCGAGACCAAAATTCG 59.209 47.619 0.00 0.00 35.76 3.34
9323 13615 3.181546 CGTACACGTCGAGACCAAAATTC 60.182 47.826 0.00 0.00 34.11 2.17
9325 13617 2.322161 CGTACACGTCGAGACCAAAAT 58.678 47.619 0.00 0.00 34.11 1.82
9326 13618 1.757574 CGTACACGTCGAGACCAAAA 58.242 50.000 0.00 0.00 34.11 2.44
9329 13621 2.557805 GCGTACACGTCGAGACCA 59.442 61.111 0.00 0.00 42.22 4.02
9332 13624 1.288419 TAACCGCGTACACGTCGAGA 61.288 55.000 4.92 3.12 42.22 4.04
9333 13625 0.452618 TTAACCGCGTACACGTCGAG 60.453 55.000 4.92 0.00 42.22 4.04
9334 13626 0.724453 GTTAACCGCGTACACGTCGA 60.724 55.000 4.92 0.00 42.22 4.20
9336 13628 1.339711 ATGTTAACCGCGTACACGTC 58.660 50.000 4.92 0.00 42.22 4.34
9337 13629 1.456544 CAATGTTAACCGCGTACACGT 59.543 47.619 4.92 0.00 42.22 4.49
9338 13630 1.201834 CCAATGTTAACCGCGTACACG 60.202 52.381 4.92 0.00 43.27 4.49
9339 13631 1.129064 CCCAATGTTAACCGCGTACAC 59.871 52.381 4.92 0.00 0.00 2.90
9340 13632 1.001746 TCCCAATGTTAACCGCGTACA 59.998 47.619 4.92 4.13 0.00 2.90
9341 13633 1.662122 CTCCCAATGTTAACCGCGTAC 59.338 52.381 4.92 0.00 0.00 3.67
9342 13634 2.008045 GCTCCCAATGTTAACCGCGTA 61.008 52.381 4.92 0.00 0.00 4.42
9344 13636 1.302383 TGCTCCCAATGTTAACCGCG 61.302 55.000 0.00 0.00 0.00 6.46
9346 13638 1.468520 CACTGCTCCCAATGTTAACCG 59.531 52.381 2.48 0.00 0.00 4.44
9347 13639 1.202348 GCACTGCTCCCAATGTTAACC 59.798 52.381 2.48 0.00 0.00 2.85
9348 13640 1.885887 TGCACTGCTCCCAATGTTAAC 59.114 47.619 1.98 0.00 0.00 2.01
9349 13641 1.885887 GTGCACTGCTCCCAATGTTAA 59.114 47.619 10.32 0.00 0.00 2.01
9352 13644 0.892358 CTGTGCACTGCTCCCAATGT 60.892 55.000 19.41 0.00 0.00 2.71
9353 13645 0.892358 ACTGTGCACTGCTCCCAATG 60.892 55.000 22.15 1.18 0.00 2.82
9354 13646 0.178981 AACTGTGCACTGCTCCCAAT 60.179 50.000 22.15 0.00 0.00 3.16
9355 13647 0.395586 AAACTGTGCACTGCTCCCAA 60.396 50.000 22.15 0.00 0.00 4.12
9356 13648 0.395586 AAAACTGTGCACTGCTCCCA 60.396 50.000 22.15 0.00 0.00 4.37
9357 13649 1.604604 TAAAACTGTGCACTGCTCCC 58.395 50.000 22.15 0.00 0.00 4.30
9358 13650 2.669391 GCATAAAACTGTGCACTGCTCC 60.669 50.000 22.15 2.30 40.94 4.70
9360 13652 1.955778 TGCATAAAACTGTGCACTGCT 59.044 42.857 22.15 8.74 45.60 4.24
9361 13653 2.030893 TCTGCATAAAACTGTGCACTGC 60.031 45.455 22.15 18.73 45.60 4.40
9363 13655 4.095483 GCTATCTGCATAAAACTGTGCACT 59.905 41.667 19.41 0.00 45.60 4.40
9367 13659 4.864916 ACGCTATCTGCATAAAACTGTG 57.135 40.909 0.00 0.00 43.06 3.66
9368 13660 6.049149 ACATACGCTATCTGCATAAAACTGT 58.951 36.000 0.00 0.00 43.06 3.55
9369 13661 6.200854 TGACATACGCTATCTGCATAAAACTG 59.799 38.462 0.00 0.00 43.06 3.16
9370 13662 6.280643 TGACATACGCTATCTGCATAAAACT 58.719 36.000 0.00 0.00 43.06 2.66
9372 13664 7.154656 AGATGACATACGCTATCTGCATAAAA 58.845 34.615 0.00 0.00 43.06 1.52
9373 13665 6.691508 AGATGACATACGCTATCTGCATAAA 58.308 36.000 0.00 0.00 43.06 1.40
9376 13668 4.381398 GGAGATGACATACGCTATCTGCAT 60.381 45.833 0.00 0.00 43.06 3.96
9377 13669 3.057245 GGAGATGACATACGCTATCTGCA 60.057 47.826 0.00 0.00 43.06 4.41
9378 13670 3.192422 AGGAGATGACATACGCTATCTGC 59.808 47.826 0.00 0.00 38.00 4.26
9379 13671 5.384063 AAGGAGATGACATACGCTATCTG 57.616 43.478 0.00 0.00 30.49 2.90
9380 13672 5.536538 TGAAAGGAGATGACATACGCTATCT 59.463 40.000 0.00 0.00 32.87 1.98
9381 13673 5.773575 TGAAAGGAGATGACATACGCTATC 58.226 41.667 0.00 0.00 0.00 2.08
9382 13674 5.303078 ACTGAAAGGAGATGACATACGCTAT 59.697 40.000 0.00 0.00 39.30 2.97
9384 13676 3.449018 ACTGAAAGGAGATGACATACGCT 59.551 43.478 0.00 0.00 39.30 5.07
9385 13677 3.786635 ACTGAAAGGAGATGACATACGC 58.213 45.455 0.00 0.00 39.30 4.42
9387 13679 5.127845 TGGAGACTGAAAGGAGATGACATAC 59.872 44.000 0.00 0.00 39.30 2.39
9388 13680 5.272402 TGGAGACTGAAAGGAGATGACATA 58.728 41.667 0.00 0.00 39.30 2.29
9389 13681 4.099633 TGGAGACTGAAAGGAGATGACAT 58.900 43.478 0.00 0.00 39.30 3.06
9390 13682 3.510459 TGGAGACTGAAAGGAGATGACA 58.490 45.455 0.00 0.00 39.30 3.58
9391 13683 4.440880 CATGGAGACTGAAAGGAGATGAC 58.559 47.826 0.00 0.00 39.30 3.06
9393 13685 3.453717 TCCATGGAGACTGAAAGGAGATG 59.546 47.826 11.44 0.00 39.30 2.90
9395 13687 3.190383 TCCATGGAGACTGAAAGGAGA 57.810 47.619 11.44 0.00 39.30 3.71
9396 13688 3.988976 TTCCATGGAGACTGAAAGGAG 57.011 47.619 15.53 0.00 39.30 3.69
9399 13691 2.686915 GGCATTCCATGGAGACTGAAAG 59.313 50.000 15.53 0.00 42.29 2.62
9400 13692 2.621407 GGGCATTCCATGGAGACTGAAA 60.621 50.000 15.53 0.00 35.00 2.69
9401 13693 1.064463 GGGCATTCCATGGAGACTGAA 60.064 52.381 15.53 0.00 35.00 3.02
9403 13695 0.549950 AGGGCATTCCATGGAGACTG 59.450 55.000 15.53 14.48 38.24 3.51
9404 13696 1.064166 CAAGGGCATTCCATGGAGACT 60.064 52.381 15.53 7.18 38.24 3.24
9407 13699 1.108776 CACAAGGGCATTCCATGGAG 58.891 55.000 15.53 5.51 38.48 3.86
9408 13700 0.409092 ACACAAGGGCATTCCATGGA 59.591 50.000 11.44 11.44 38.48 3.41
9410 13702 1.067425 CACACACAAGGGCATTCCATG 60.067 52.381 0.00 0.00 39.94 3.66
9411 13703 1.259609 CACACACAAGGGCATTCCAT 58.740 50.000 0.00 0.00 38.24 3.41
9414 13706 1.200020 GTAGCACACACAAGGGCATTC 59.800 52.381 0.00 0.00 0.00 2.67
9415 13707 1.247567 GTAGCACACACAAGGGCATT 58.752 50.000 0.00 0.00 0.00 3.56
9416 13708 0.609131 GGTAGCACACACAAGGGCAT 60.609 55.000 0.00 0.00 0.00 4.40
9417 13709 1.228124 GGTAGCACACACAAGGGCA 60.228 57.895 0.00 0.00 0.00 5.36
9418 13710 0.955919 GAGGTAGCACACACAAGGGC 60.956 60.000 0.00 0.00 0.00 5.19
9420 13712 1.800805 CAGAGGTAGCACACACAAGG 58.199 55.000 0.00 0.00 0.00 3.61
9422 13714 0.758734 AGCAGAGGTAGCACACACAA 59.241 50.000 0.00 0.00 0.00 3.33
9423 13715 0.318441 GAGCAGAGGTAGCACACACA 59.682 55.000 0.00 0.00 0.00 3.72
9424 13716 0.734253 CGAGCAGAGGTAGCACACAC 60.734 60.000 0.00 0.00 0.00 3.82
9425 13717 0.893727 TCGAGCAGAGGTAGCACACA 60.894 55.000 0.00 0.00 0.00 3.72
9426 13718 0.456995 GTCGAGCAGAGGTAGCACAC 60.457 60.000 0.00 0.00 0.00 3.82
9429 13721 1.883732 GTGTCGAGCAGAGGTAGCA 59.116 57.895 0.00 0.00 0.00 3.49
9431 13723 0.375454 CTCGTGTCGAGCAGAGGTAG 59.625 60.000 6.24 0.00 46.75 3.18
9432 13724 2.467962 CTCGTGTCGAGCAGAGGTA 58.532 57.895 6.24 0.00 46.75 3.08
9441 13733 2.349969 AAGCTGTGCACTCGTGTCGA 62.350 55.000 19.41 0.00 0.00 4.20
9442 13734 1.880601 GAAGCTGTGCACTCGTGTCG 61.881 60.000 19.41 0.00 0.00 4.35
9443 13735 0.598680 AGAAGCTGTGCACTCGTGTC 60.599 55.000 19.41 8.96 0.00 3.67
9444 13736 0.877649 CAGAAGCTGTGCACTCGTGT 60.878 55.000 19.41 4.04 0.00 4.49
9445 13737 1.858041 CAGAAGCTGTGCACTCGTG 59.142 57.895 19.41 6.86 0.00 4.35
9446 13738 1.958205 GCAGAAGCTGTGCACTCGT 60.958 57.895 19.41 8.08 40.86 4.18
9448 13740 1.867615 CTGCAGAAGCTGTGCACTC 59.132 57.895 19.41 9.92 45.96 3.51
9449 13741 4.060372 CTGCAGAAGCTGTGCACT 57.940 55.556 19.41 0.00 45.96 4.40
9458 13750 0.666577 GCAAAGCCAAGCTGCAGAAG 60.667 55.000 20.43 5.65 39.62 2.85
9459 13751 1.364901 GCAAAGCCAAGCTGCAGAA 59.635 52.632 20.43 0.00 39.62 3.02
9460 13752 3.045142 GCAAAGCCAAGCTGCAGA 58.955 55.556 20.43 0.00 39.62 4.26
9471 13763 3.667429 GATCACGCACCGGCAAAGC 62.667 63.158 0.00 0.00 41.24 3.51
9472 13764 2.034879 AGATCACGCACCGGCAAAG 61.035 57.895 0.00 0.00 41.24 2.77
9473 13765 2.031919 AGATCACGCACCGGCAAA 59.968 55.556 0.00 0.00 41.24 3.68
9474 13766 2.741985 CAGATCACGCACCGGCAA 60.742 61.111 0.00 0.00 41.24 4.52
9475 13767 3.932580 GACAGATCACGCACCGGCA 62.933 63.158 0.00 0.00 41.24 5.69
9477 13769 2.094659 GTGACAGATCACGCACCGG 61.095 63.158 0.00 0.00 45.66 5.28
9495 13787 4.779082 GCTGAGCATTTTGTCACGTATACG 60.779 45.833 23.24 23.24 46.33 3.06
9496 13788 4.330074 AGCTGAGCATTTTGTCACGTATAC 59.670 41.667 7.39 0.00 0.00 1.47
9497 13789 4.329801 CAGCTGAGCATTTTGTCACGTATA 59.670 41.667 8.42 0.00 0.00 1.47
9498 13790 3.125829 CAGCTGAGCATTTTGTCACGTAT 59.874 43.478 8.42 0.00 0.00 3.06
9500 13792 1.265095 CAGCTGAGCATTTTGTCACGT 59.735 47.619 8.42 0.00 0.00 4.49
9501 13793 1.400629 CCAGCTGAGCATTTTGTCACG 60.401 52.381 17.39 0.00 0.00 4.35
9502 13794 1.668047 GCCAGCTGAGCATTTTGTCAC 60.668 52.381 17.39 0.00 0.00 3.67
9503 13795 0.599558 GCCAGCTGAGCATTTTGTCA 59.400 50.000 17.39 0.00 0.00 3.58
9504 13796 0.108945 GGCCAGCTGAGCATTTTGTC 60.109 55.000 17.39 0.00 0.00 3.18
9505 13797 0.828762 TGGCCAGCTGAGCATTTTGT 60.829 50.000 17.39 0.00 0.00 2.83
9509 13801 1.378250 GACTGGCCAGCTGAGCATT 60.378 57.895 33.06 10.64 0.00 3.56
9510 13802 2.271497 GACTGGCCAGCTGAGCAT 59.729 61.111 33.06 11.49 0.00 3.79
9511 13803 4.025858 GGACTGGCCAGCTGAGCA 62.026 66.667 33.06 7.13 36.34 4.26
9513 13805 4.106925 GGGGACTGGCCAGCTGAG 62.107 72.222 33.06 10.36 38.95 3.35
9514 13806 4.980592 TGGGGACTGGCCAGCTGA 62.981 66.667 33.06 9.55 38.95 4.26
9515 13807 4.421515 CTGGGGACTGGCCAGCTG 62.422 72.222 33.06 15.75 38.95 4.24
9522 13814 2.690653 TTTCAACCGCTGGGGACTGG 62.691 60.000 18.53 3.85 39.97 4.00
9523 13815 0.609131 ATTTCAACCGCTGGGGACTG 60.609 55.000 18.53 13.46 39.97 3.51
9524 13816 0.609131 CATTTCAACCGCTGGGGACT 60.609 55.000 18.53 0.91 39.97 3.85
9526 13818 1.976474 GCATTTCAACCGCTGGGGA 60.976 57.895 18.53 0.00 39.97 4.81
9530 13822 2.138596 AAACTGCATTTCAACCGCTG 57.861 45.000 0.00 0.00 0.00 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.