Multiple sequence alignment - TraesCS2B01G499100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G499100 chr2B 100.000 5123 0 0 1 5123 695372045 695377167 0.000000e+00 9461.0
1 TraesCS2B01G499100 chr2B 79.969 644 112 10 1015 1650 695383782 695384416 4.670000e-125 459.0
2 TraesCS2B01G499100 chr2B 79.969 649 109 13 1012 1650 695433014 695433651 4.670000e-125 459.0
3 TraesCS2B01G499100 chr2B 91.489 94 6 2 4711 4803 695435430 695435522 1.500000e-25 128.0
4 TraesCS2B01G499100 chr2B 93.902 82 5 0 2403 2484 695384435 695384516 1.940000e-24 124.0
5 TraesCS2B01G499100 chr2D 89.944 3232 265 32 1616 4826 577796130 577799322 0.000000e+00 4113.0
6 TraesCS2B01G499100 chr2D 89.765 2169 208 9 1309 3474 577456533 577454376 0.000000e+00 2763.0
7 TraesCS2B01G499100 chr2D 89.088 1677 123 33 3461 5122 577445327 577443696 0.000000e+00 2028.0
8 TraesCS2B01G499100 chr2D 85.843 445 57 2 1015 1459 577790130 577790568 7.770000e-128 468.0
9 TraesCS2B01G499100 chr2D 78.375 763 131 22 900 1650 577824167 577824907 1.000000e-126 464.0
10 TraesCS2B01G499100 chr2D 83.772 456 42 12 1008 1462 577456951 577456527 2.220000e-108 403.0
11 TraesCS2B01G499100 chr2D 86.350 337 13 9 465 782 577457444 577457122 2.290000e-88 337.0
12 TraesCS2B01G499100 chr2D 80.435 276 38 10 4819 5088 577799356 577799621 4.050000e-46 196.0
13 TraesCS2B01G499100 chr2D 79.734 301 35 15 4563 4855 577825995 577826277 1.460000e-45 195.0
14 TraesCS2B01G499100 chr2D 92.683 82 6 0 2403 2484 577824926 577825007 9.010000e-23 119.0
15 TraesCS2B01G499100 chr2D 97.872 47 1 0 589 635 577823785 577823831 1.180000e-11 82.4
16 TraesCS2B01G499100 chr2A 81.950 1723 256 20 1008 2711 715944632 715946318 0.000000e+00 1408.0
17 TraesCS2B01G499100 chr2A 84.757 1089 91 34 4062 5123 715947151 715948191 0.000000e+00 1022.0
18 TraesCS2B01G499100 chr2A 91.371 649 56 0 2800 3448 715946369 715947017 0.000000e+00 889.0
19 TraesCS2B01G499100 chr2A 85.075 402 24 14 392 782 715944080 715944456 1.350000e-100 377.0
20 TraesCS2B01G499100 chr2A 97.638 127 3 0 267 393 715943882 715944008 8.640000e-53 219.0
21 TraesCS2B01G499100 chr2A 80.524 267 49 1 1015 1278 715961343 715961609 8.700000e-48 202.0
22 TraesCS2B01G499100 chr2A 97.561 41 0 1 4563 4603 715962650 715962689 9.200000e-08 69.4
23 TraesCS2B01G499100 chr3B 98.507 67 0 1 18 84 84657687 84657752 3.240000e-22 117.0
24 TraesCS2B01G499100 chr7B 98.462 65 0 1 18 82 695881302 695881239 4.190000e-21 113.0
25 TraesCS2B01G499100 chr7B 98.438 64 0 1 18 81 639919128 639919066 1.510000e-20 111.0
26 TraesCS2B01G499100 chrUn 97.015 67 1 1 18 84 100328856 100328791 1.510000e-20 111.0
27 TraesCS2B01G499100 chr7D 91.667 84 2 2 1 79 582034928 582034845 1.510000e-20 111.0
28 TraesCS2B01G499100 chr5D 95.714 70 2 1 18 87 149911714 149911782 1.510000e-20 111.0
29 TraesCS2B01G499100 chr1B 98.413 63 0 1 18 80 523333481 523333542 5.420000e-20 110.0
30 TraesCS2B01G499100 chr4D 92.308 78 2 4 6 80 85594058 85593982 1.950000e-19 108.0
31 TraesCS2B01G499100 chr3A 92.000 75 3 3 6 78 42047194 42047121 9.070000e-18 102.0
32 TraesCS2B01G499100 chr6B 96.970 33 0 1 1 33 100701536 100701567 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G499100 chr2B 695372045 695377167 5122 False 9461.000000 9461 100.0000 1 5123 1 chr2B.!!$F1 5122
1 TraesCS2B01G499100 chr2B 695433014 695435522 2508 False 293.500000 459 85.7290 1012 4803 2 chr2B.!!$F3 3791
2 TraesCS2B01G499100 chr2B 695383782 695384516 734 False 291.500000 459 86.9355 1015 2484 2 chr2B.!!$F2 1469
3 TraesCS2B01G499100 chr2D 577796130 577799621 3491 False 2154.500000 4113 85.1895 1616 5088 2 chr2D.!!$F2 3472
4 TraesCS2B01G499100 chr2D 577443696 577445327 1631 True 2028.000000 2028 89.0880 3461 5122 1 chr2D.!!$R1 1661
5 TraesCS2B01G499100 chr2D 577454376 577457444 3068 True 1167.666667 2763 86.6290 465 3474 3 chr2D.!!$R2 3009
6 TraesCS2B01G499100 chr2D 577823785 577826277 2492 False 215.100000 464 87.1660 589 4855 4 chr2D.!!$F3 4266
7 TraesCS2B01G499100 chr2A 715943882 715948191 4309 False 783.000000 1408 88.1582 267 5123 5 chr2A.!!$F1 4856

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
127 128 0.035458 GGCCTCAAGCGGTGCTATAT 59.965 55.0 0.00 0.00 45.17 0.86 F
218 219 0.039035 TTCCGGGATTTGGAGGTTGG 59.961 55.0 0.00 0.00 36.72 3.77 F
922 1111 0.104120 TCCGCCGGTGAACATGATAG 59.896 55.0 18.79 0.00 0.00 2.08 F
1848 2206 0.037590 TTACGCTGGGCCAGAACATT 59.962 50.0 37.07 16.55 32.44 2.71 F
2871 3229 0.108615 CGCCGAGAACAGGAAGACAT 60.109 55.0 0.00 0.00 0.00 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1028 1217 0.038892 CAGCAAAAACGCCAGCAGAT 60.039 50.000 0.00 0.0 0.00 2.90 R
1580 1921 0.679002 CTGGGTGGAGTTGCTGATGG 60.679 60.000 0.00 0.0 0.00 3.51 R
2129 2487 0.892755 TCCACCCATGTGTAGACGTC 59.107 55.000 7.70 7.7 41.09 4.34 R
3537 3895 2.299297 ACTTGAATCTCCGACCGTTCTT 59.701 45.455 0.00 0.0 0.00 2.52 R
4379 4888 0.460811 CACATCGCTTGCCTGCTAGA 60.461 55.000 4.77 0.0 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.760047 GAGCCGAGCCGAGCCAAA 62.760 66.667 0.00 0.00 0.00 3.28
30 31 4.767255 AGCCGAGCCGAGCCAAAG 62.767 66.667 0.00 0.00 0.00 2.77
34 35 3.130160 GAGCCGAGCCAAAGCCAG 61.130 66.667 0.00 0.00 41.25 4.85
35 36 4.729918 AGCCGAGCCAAAGCCAGG 62.730 66.667 0.00 0.00 41.25 4.45
42 43 2.273449 CCAAAGCCAGGCTCGGAT 59.727 61.111 21.07 0.50 38.25 4.18
43 44 1.821332 CCAAAGCCAGGCTCGGATC 60.821 63.158 21.07 0.00 38.25 3.36
44 45 1.078214 CAAAGCCAGGCTCGGATCA 60.078 57.895 16.53 0.00 38.25 2.92
45 46 0.677731 CAAAGCCAGGCTCGGATCAA 60.678 55.000 16.53 0.00 38.25 2.57
46 47 0.393537 AAAGCCAGGCTCGGATCAAG 60.394 55.000 16.53 0.00 38.25 3.02
47 48 2.883267 AAGCCAGGCTCGGATCAAGC 62.883 60.000 16.53 10.12 38.25 4.01
48 49 2.906458 CCAGGCTCGGATCAAGCT 59.094 61.111 16.23 3.42 39.75 3.74
49 50 1.227497 CCAGGCTCGGATCAAGCTC 60.227 63.158 16.23 8.68 39.75 4.09
50 51 1.591059 CAGGCTCGGATCAAGCTCG 60.591 63.158 16.23 1.18 39.75 5.03
51 52 2.279784 GGCTCGGATCAAGCTCGG 60.280 66.667 16.23 0.00 39.75 4.63
52 53 2.964389 GCTCGGATCAAGCTCGGC 60.964 66.667 11.07 0.60 36.80 5.54
53 54 2.811101 CTCGGATCAAGCTCGGCT 59.189 61.111 0.00 0.00 42.56 5.52
54 55 1.299773 CTCGGATCAAGCTCGGCTC 60.300 63.158 0.00 0.00 38.25 4.70
55 56 2.656651 CGGATCAAGCTCGGCTCG 60.657 66.667 0.00 0.00 38.25 5.03
56 57 2.279784 GGATCAAGCTCGGCTCGG 60.280 66.667 0.00 0.00 38.25 4.63
57 58 2.964389 GATCAAGCTCGGCTCGGC 60.964 66.667 0.00 0.00 38.25 5.54
58 59 3.438017 GATCAAGCTCGGCTCGGCT 62.438 63.158 0.00 5.30 38.25 5.52
59 60 3.438017 ATCAAGCTCGGCTCGGCTC 62.438 63.158 9.59 0.00 38.25 4.70
69 70 4.838486 CTCGGCTCGGCTCGTGTC 62.838 72.222 0.00 0.00 0.00 3.67
72 73 4.803426 GGCTCGGCTCGTGTCCAG 62.803 72.222 0.00 0.00 0.00 3.86
78 79 2.184579 GCTCGTGTCCAGCCCTAC 59.815 66.667 0.00 0.00 0.00 3.18
79 80 2.893398 CTCGTGTCCAGCCCTACC 59.107 66.667 0.00 0.00 0.00 3.18
80 81 2.682494 TCGTGTCCAGCCCTACCC 60.682 66.667 0.00 0.00 0.00 3.69
81 82 3.000819 CGTGTCCAGCCCTACCCA 61.001 66.667 0.00 0.00 0.00 4.51
82 83 2.669240 GTGTCCAGCCCTACCCAC 59.331 66.667 0.00 0.00 0.00 4.61
83 84 2.205749 TGTCCAGCCCTACCCACA 59.794 61.111 0.00 0.00 0.00 4.17
84 85 1.918293 TGTCCAGCCCTACCCACAG 60.918 63.158 0.00 0.00 0.00 3.66
85 86 1.918800 GTCCAGCCCTACCCACAGT 60.919 63.158 0.00 0.00 0.00 3.55
86 87 1.918293 TCCAGCCCTACCCACAGTG 60.918 63.158 0.00 0.00 0.00 3.66
87 88 2.671070 CAGCCCTACCCACAGTGG 59.329 66.667 13.35 13.35 37.25 4.00
88 89 2.207189 AGCCCTACCCACAGTGGT 59.793 61.111 18.82 9.12 42.62 4.16
89 90 2.224159 AGCCCTACCCACAGTGGTG 61.224 63.158 18.82 12.10 44.85 4.17
90 91 2.526046 GCCCTACCCACAGTGGTGT 61.526 63.158 18.82 16.96 43.71 4.16
91 92 1.196104 GCCCTACCCACAGTGGTGTA 61.196 60.000 18.82 17.15 43.71 2.90
92 93 0.611714 CCCTACCCACAGTGGTGTAC 59.388 60.000 18.82 0.00 43.71 2.90
93 94 1.640917 CCTACCCACAGTGGTGTACT 58.359 55.000 18.82 0.00 43.71 2.73
94 95 1.975680 CCTACCCACAGTGGTGTACTT 59.024 52.381 18.82 0.00 43.71 2.24
95 96 3.167485 CCTACCCACAGTGGTGTACTTA 58.833 50.000 18.82 0.87 43.71 2.24
96 97 3.579586 CCTACCCACAGTGGTGTACTTAA 59.420 47.826 18.82 0.54 43.71 1.85
97 98 3.764237 ACCCACAGTGGTGTACTTAAG 57.236 47.619 18.82 0.00 43.71 1.85
98 99 3.043418 ACCCACAGTGGTGTACTTAAGT 58.957 45.455 18.82 13.68 43.71 2.24
99 100 4.225573 ACCCACAGTGGTGTACTTAAGTA 58.774 43.478 18.82 11.38 43.71 2.24
100 101 4.282703 ACCCACAGTGGTGTACTTAAGTAG 59.717 45.833 18.82 5.08 43.71 2.57
101 102 4.243270 CCACAGTGGTGTACTTAAGTAGC 58.757 47.826 15.68 11.24 43.71 3.58
102 103 4.262292 CCACAGTGGTGTACTTAAGTAGCA 60.262 45.833 15.68 10.56 43.71 3.49
103 104 5.294356 CACAGTGGTGTACTTAAGTAGCAA 58.706 41.667 15.68 3.16 40.24 3.91
104 105 5.756347 CACAGTGGTGTACTTAAGTAGCAAA 59.244 40.000 15.68 6.66 40.24 3.68
105 106 5.756833 ACAGTGGTGTACTTAAGTAGCAAAC 59.243 40.000 15.68 15.49 37.60 2.93
106 107 5.178809 CAGTGGTGTACTTAAGTAGCAAACC 59.821 44.000 15.68 18.47 37.60 3.27
107 108 4.453478 GTGGTGTACTTAAGTAGCAAACCC 59.547 45.833 15.68 13.21 0.00 4.11
108 109 3.681417 GGTGTACTTAAGTAGCAAACCCG 59.319 47.826 15.68 0.00 0.00 5.28
109 110 3.681417 GTGTACTTAAGTAGCAAACCCGG 59.319 47.826 15.68 0.00 0.00 5.73
110 111 1.817357 ACTTAAGTAGCAAACCCGGC 58.183 50.000 6.26 0.00 0.00 6.13
111 112 1.092348 CTTAAGTAGCAAACCCGGCC 58.908 55.000 0.00 0.00 0.00 6.13
112 113 0.694196 TTAAGTAGCAAACCCGGCCT 59.306 50.000 0.00 0.00 0.00 5.19
113 114 0.251073 TAAGTAGCAAACCCGGCCTC 59.749 55.000 0.00 0.00 0.00 4.70
114 115 1.774894 AAGTAGCAAACCCGGCCTCA 61.775 55.000 0.00 0.00 0.00 3.86
115 116 1.302993 GTAGCAAACCCGGCCTCAA 60.303 57.895 0.00 0.00 0.00 3.02
116 117 1.002624 TAGCAAACCCGGCCTCAAG 60.003 57.895 0.00 0.00 0.00 3.02
117 118 4.056125 GCAAACCCGGCCTCAAGC 62.056 66.667 0.00 0.00 42.60 4.01
118 119 3.737172 CAAACCCGGCCTCAAGCG 61.737 66.667 0.00 0.00 45.17 4.68
124 125 4.451150 CGGCCTCAAGCGGTGCTA 62.451 66.667 0.00 0.00 45.17 3.49
125 126 2.190578 GGCCTCAAGCGGTGCTAT 59.809 61.111 0.00 0.00 45.17 2.97
126 127 1.445942 GGCCTCAAGCGGTGCTATA 59.554 57.895 0.00 0.00 45.17 1.31
127 128 0.035458 GGCCTCAAGCGGTGCTATAT 59.965 55.000 0.00 0.00 45.17 0.86
128 129 1.433534 GCCTCAAGCGGTGCTATATC 58.566 55.000 0.00 0.00 38.25 1.63
129 130 1.270305 GCCTCAAGCGGTGCTATATCA 60.270 52.381 0.00 0.00 38.25 2.15
130 131 2.681706 CCTCAAGCGGTGCTATATCAG 58.318 52.381 0.00 0.00 38.25 2.90
147 148 6.683312 ATATCAGCAAATCCTCTCATCAGA 57.317 37.500 0.00 0.00 0.00 3.27
148 149 4.134379 TCAGCAAATCCTCTCATCAGAC 57.866 45.455 0.00 0.00 0.00 3.51
149 150 3.516700 TCAGCAAATCCTCTCATCAGACA 59.483 43.478 0.00 0.00 0.00 3.41
150 151 3.872182 CAGCAAATCCTCTCATCAGACAG 59.128 47.826 0.00 0.00 0.00 3.51
151 152 2.613133 GCAAATCCTCTCATCAGACAGC 59.387 50.000 0.00 0.00 0.00 4.40
152 153 2.864946 CAAATCCTCTCATCAGACAGCG 59.135 50.000 0.00 0.00 0.00 5.18
153 154 2.064434 ATCCTCTCATCAGACAGCGA 57.936 50.000 0.00 0.00 0.00 4.93
154 155 2.064434 TCCTCTCATCAGACAGCGAT 57.936 50.000 0.00 0.00 0.00 4.58
155 156 3.214696 TCCTCTCATCAGACAGCGATA 57.785 47.619 0.00 0.00 0.00 2.92
156 157 3.760738 TCCTCTCATCAGACAGCGATAT 58.239 45.455 0.00 0.00 0.00 1.63
157 158 4.911390 TCCTCTCATCAGACAGCGATATA 58.089 43.478 0.00 0.00 0.00 0.86
158 159 5.316987 TCCTCTCATCAGACAGCGATATAA 58.683 41.667 0.00 0.00 0.00 0.98
159 160 5.414144 TCCTCTCATCAGACAGCGATATAAG 59.586 44.000 0.00 0.00 0.00 1.73
160 161 5.392919 CCTCTCATCAGACAGCGATATAAGG 60.393 48.000 0.00 0.00 0.00 2.69
161 162 4.460731 TCTCATCAGACAGCGATATAAGGG 59.539 45.833 0.00 0.00 0.00 3.95
162 163 3.056536 TCATCAGACAGCGATATAAGGGC 60.057 47.826 0.00 0.00 0.00 5.19
163 164 2.316108 TCAGACAGCGATATAAGGGCA 58.684 47.619 0.00 0.00 0.00 5.36
164 165 2.899900 TCAGACAGCGATATAAGGGCAT 59.100 45.455 0.00 0.00 0.00 4.40
165 166 4.086457 TCAGACAGCGATATAAGGGCATA 58.914 43.478 0.00 0.00 0.00 3.14
166 167 4.526650 TCAGACAGCGATATAAGGGCATAA 59.473 41.667 0.00 0.00 0.00 1.90
167 168 5.011635 TCAGACAGCGATATAAGGGCATAAA 59.988 40.000 0.00 0.00 0.00 1.40
168 169 5.349817 CAGACAGCGATATAAGGGCATAAAG 59.650 44.000 0.00 0.00 0.00 1.85
169 170 5.246203 AGACAGCGATATAAGGGCATAAAGA 59.754 40.000 0.00 0.00 0.00 2.52
170 171 5.865085 ACAGCGATATAAGGGCATAAAGAA 58.135 37.500 0.00 0.00 0.00 2.52
171 172 5.701290 ACAGCGATATAAGGGCATAAAGAAC 59.299 40.000 0.00 0.00 0.00 3.01
172 173 5.122396 CAGCGATATAAGGGCATAAAGAACC 59.878 44.000 0.00 0.00 0.00 3.62
173 174 4.092968 GCGATATAAGGGCATAAAGAACCG 59.907 45.833 0.00 0.00 0.00 4.44
174 175 4.630069 CGATATAAGGGCATAAAGAACCGG 59.370 45.833 0.00 0.00 0.00 5.28
175 176 2.721425 TAAGGGCATAAAGAACCGGG 57.279 50.000 6.32 0.00 0.00 5.73
176 177 0.996583 AAGGGCATAAAGAACCGGGA 59.003 50.000 6.32 0.00 0.00 5.14
177 178 1.222567 AGGGCATAAAGAACCGGGAT 58.777 50.000 6.32 0.00 0.00 3.85
178 179 1.569072 AGGGCATAAAGAACCGGGATT 59.431 47.619 6.32 0.00 0.00 3.01
179 180 2.781174 AGGGCATAAAGAACCGGGATTA 59.219 45.455 6.32 0.00 0.00 1.75
180 181 3.146847 GGGCATAAAGAACCGGGATTAG 58.853 50.000 6.32 0.00 0.00 1.73
181 182 3.181448 GGGCATAAAGAACCGGGATTAGA 60.181 47.826 6.32 0.00 0.00 2.10
182 183 4.065789 GGCATAAAGAACCGGGATTAGAG 58.934 47.826 6.32 0.00 0.00 2.43
183 184 4.202326 GGCATAAAGAACCGGGATTAGAGA 60.202 45.833 6.32 0.00 0.00 3.10
184 185 4.991687 GCATAAAGAACCGGGATTAGAGAG 59.008 45.833 6.32 0.00 0.00 3.20
185 186 5.453480 GCATAAAGAACCGGGATTAGAGAGT 60.453 44.000 6.32 0.00 0.00 3.24
186 187 6.583562 CATAAAGAACCGGGATTAGAGAGTT 58.416 40.000 6.32 0.00 0.00 3.01
187 188 4.473477 AAGAACCGGGATTAGAGAGTTG 57.527 45.455 6.32 0.00 0.00 3.16
188 189 2.766828 AGAACCGGGATTAGAGAGTTGG 59.233 50.000 6.32 0.00 0.00 3.77
189 190 1.497161 ACCGGGATTAGAGAGTTGGG 58.503 55.000 6.32 0.00 0.00 4.12
190 191 0.759346 CCGGGATTAGAGAGTTGGGG 59.241 60.000 0.00 0.00 0.00 4.96
191 192 0.759346 CGGGATTAGAGAGTTGGGGG 59.241 60.000 0.00 0.00 0.00 5.40
192 193 1.894699 GGGATTAGAGAGTTGGGGGT 58.105 55.000 0.00 0.00 0.00 4.95
193 194 2.691850 CGGGATTAGAGAGTTGGGGGTA 60.692 54.545 0.00 0.00 0.00 3.69
194 195 2.704596 GGGATTAGAGAGTTGGGGGTAC 59.295 54.545 0.00 0.00 0.00 3.34
214 215 1.308998 CGATTTCCGGGATTTGGAGG 58.691 55.000 0.00 0.00 36.72 4.30
215 216 1.408266 CGATTTCCGGGATTTGGAGGT 60.408 52.381 0.00 0.00 36.72 3.85
216 217 2.735151 GATTTCCGGGATTTGGAGGTT 58.265 47.619 0.00 0.00 36.72 3.50
217 218 1.917872 TTTCCGGGATTTGGAGGTTG 58.082 50.000 0.00 0.00 36.72 3.77
218 219 0.039035 TTCCGGGATTTGGAGGTTGG 59.961 55.000 0.00 0.00 36.72 3.77
219 220 1.137594 TCCGGGATTTGGAGGTTGGT 61.138 55.000 0.00 0.00 0.00 3.67
220 221 0.965363 CCGGGATTTGGAGGTTGGTG 60.965 60.000 0.00 0.00 0.00 4.17
221 222 0.251165 CGGGATTTGGAGGTTGGTGT 60.251 55.000 0.00 0.00 0.00 4.16
222 223 1.821666 CGGGATTTGGAGGTTGGTGTT 60.822 52.381 0.00 0.00 0.00 3.32
223 224 1.893137 GGGATTTGGAGGTTGGTGTTC 59.107 52.381 0.00 0.00 0.00 3.18
224 225 2.593026 GGATTTGGAGGTTGGTGTTCA 58.407 47.619 0.00 0.00 0.00 3.18
225 226 2.962421 GGATTTGGAGGTTGGTGTTCAA 59.038 45.455 0.00 0.00 0.00 2.69
226 227 3.386402 GGATTTGGAGGTTGGTGTTCAAA 59.614 43.478 0.00 0.00 37.08 2.69
227 228 4.141824 GGATTTGGAGGTTGGTGTTCAAAA 60.142 41.667 0.00 0.00 37.08 2.44
228 229 3.878160 TTGGAGGTTGGTGTTCAAAAC 57.122 42.857 0.00 0.00 37.08 2.43
229 230 2.104170 TGGAGGTTGGTGTTCAAAACC 58.896 47.619 0.00 0.00 43.08 3.27
230 231 2.104170 GGAGGTTGGTGTTCAAAACCA 58.896 47.619 0.00 0.00 46.01 3.67
231 232 2.698274 GGAGGTTGGTGTTCAAAACCAT 59.302 45.455 0.00 0.00 46.85 3.55
232 233 3.492482 GGAGGTTGGTGTTCAAAACCATG 60.492 47.826 0.00 0.00 46.85 3.66
233 234 3.103742 AGGTTGGTGTTCAAAACCATGT 58.896 40.909 0.00 0.00 46.85 3.21
234 235 3.132111 AGGTTGGTGTTCAAAACCATGTC 59.868 43.478 0.00 0.00 46.85 3.06
235 236 3.112580 GTTGGTGTTCAAAACCATGTCG 58.887 45.455 0.00 0.00 46.85 4.35
236 237 2.370349 TGGTGTTCAAAACCATGTCGT 58.630 42.857 0.00 0.00 42.82 4.34
237 238 3.542648 TGGTGTTCAAAACCATGTCGTA 58.457 40.909 0.00 0.00 42.82 3.43
238 239 3.312973 TGGTGTTCAAAACCATGTCGTAC 59.687 43.478 0.00 0.00 42.82 3.67
239 240 3.537806 GTGTTCAAAACCATGTCGTACG 58.462 45.455 9.53 9.53 0.00 3.67
240 241 3.245754 GTGTTCAAAACCATGTCGTACGA 59.754 43.478 15.28 15.28 0.00 3.43
241 242 3.491639 TGTTCAAAACCATGTCGTACGAG 59.508 43.478 20.18 9.56 0.00 4.18
242 243 3.374220 TCAAAACCATGTCGTACGAGT 57.626 42.857 20.18 10.28 0.00 4.18
243 244 3.719924 TCAAAACCATGTCGTACGAGTT 58.280 40.909 20.18 15.96 0.00 3.01
244 245 3.737266 TCAAAACCATGTCGTACGAGTTC 59.263 43.478 20.18 7.88 0.00 3.01
245 246 3.374220 AAACCATGTCGTACGAGTTCA 57.626 42.857 20.18 13.91 0.00 3.18
246 247 2.631418 ACCATGTCGTACGAGTTCAG 57.369 50.000 20.18 9.30 0.00 3.02
247 248 1.201647 ACCATGTCGTACGAGTTCAGG 59.798 52.381 20.18 17.59 0.00 3.86
248 249 1.471287 CCATGTCGTACGAGTTCAGGA 59.529 52.381 20.18 0.00 0.00 3.86
249 250 2.099263 CCATGTCGTACGAGTTCAGGAT 59.901 50.000 20.18 0.00 0.00 3.24
250 251 3.428999 CCATGTCGTACGAGTTCAGGATT 60.429 47.826 20.18 0.00 0.00 3.01
251 252 3.928727 TGTCGTACGAGTTCAGGATTT 57.071 42.857 20.18 0.00 0.00 2.17
252 253 5.337554 CATGTCGTACGAGTTCAGGATTTA 58.662 41.667 20.18 0.00 0.00 1.40
253 254 5.375417 TGTCGTACGAGTTCAGGATTTAA 57.625 39.130 20.18 0.00 0.00 1.52
254 255 5.771469 TGTCGTACGAGTTCAGGATTTAAA 58.229 37.500 20.18 0.00 0.00 1.52
255 256 6.215121 TGTCGTACGAGTTCAGGATTTAAAA 58.785 36.000 20.18 0.00 0.00 1.52
256 257 6.144402 TGTCGTACGAGTTCAGGATTTAAAAC 59.856 38.462 20.18 1.40 0.00 2.43
257 258 5.343058 TCGTACGAGTTCAGGATTTAAAACG 59.657 40.000 15.28 0.00 0.00 3.60
258 259 5.443693 CGTACGAGTTCAGGATTTAAAACGG 60.444 44.000 10.44 0.00 0.00 4.44
259 260 4.634199 ACGAGTTCAGGATTTAAAACGGA 58.366 39.130 0.00 0.00 0.00 4.69
260 261 4.450080 ACGAGTTCAGGATTTAAAACGGAC 59.550 41.667 0.00 0.00 0.00 4.79
261 262 4.689345 CGAGTTCAGGATTTAAAACGGACT 59.311 41.667 0.00 0.00 0.00 3.85
262 263 5.178809 CGAGTTCAGGATTTAAAACGGACTT 59.821 40.000 0.00 0.00 0.00 3.01
263 264 6.555812 AGTTCAGGATTTAAAACGGACTTC 57.444 37.500 0.00 0.00 0.00 3.01
264 265 6.059484 AGTTCAGGATTTAAAACGGACTTCA 58.941 36.000 0.00 0.00 0.00 3.02
265 266 5.934935 TCAGGATTTAAAACGGACTTCAC 57.065 39.130 0.00 0.00 0.00 3.18
292 293 2.259618 ACAACGAGCGCATTACTAGTG 58.740 47.619 11.47 0.00 0.00 2.74
325 326 0.673985 AAAAGCAGGGTTCCGAAAGC 59.326 50.000 0.00 0.00 0.00 3.51
348 349 1.867233 GCATGATAATCACGACGGCTT 59.133 47.619 0.00 0.00 0.00 4.35
417 491 7.555306 TTAGATAGATCTGGGATACGATTCG 57.445 40.000 5.18 4.14 37.76 3.34
527 601 1.079057 GGAGTGGAAGGCTCCGTTC 60.079 63.158 0.00 0.00 45.85 3.95
635 719 0.251386 TGCATTTAAACCGCTGGGGA 60.251 50.000 18.53 0.00 39.97 4.81
637 721 1.273886 GCATTTAAACCGCTGGGGAAA 59.726 47.619 18.53 8.08 39.97 3.13
638 722 2.093711 GCATTTAAACCGCTGGGGAAAT 60.094 45.455 18.53 10.02 39.97 2.17
640 724 4.678622 CATTTAAACCGCTGGGGAAATAC 58.321 43.478 18.53 0.00 39.97 1.89
641 725 3.436577 TTAAACCGCTGGGGAAATACA 57.563 42.857 18.53 0.00 39.97 2.29
642 726 1.834188 AAACCGCTGGGGAAATACAG 58.166 50.000 18.53 0.00 39.97 2.74
643 727 0.696501 AACCGCTGGGGAAATACAGT 59.303 50.000 18.53 0.00 39.97 3.55
646 730 0.392998 CGCTGGGGAAATACAGTGCT 60.393 55.000 0.00 0.00 38.24 4.40
679 763 5.690997 TTGAAACGTATGCATACAAACCA 57.309 34.783 30.83 20.83 32.87 3.67
721 814 3.711842 TTTTGCGCGCTCCTGTCG 61.712 61.111 33.29 0.00 0.00 4.35
757 892 4.095782 ACGCTACTCTCTCTGTTCTTGATC 59.904 45.833 0.00 0.00 0.00 2.92
767 902 3.742882 TCTGTTCTTGATCACTTCTTGCG 59.257 43.478 0.00 0.00 0.00 4.85
768 903 3.466836 TGTTCTTGATCACTTCTTGCGT 58.533 40.909 0.00 0.00 0.00 5.24
769 904 3.248363 TGTTCTTGATCACTTCTTGCGTG 59.752 43.478 0.00 0.00 0.00 5.34
770 905 3.111853 TCTTGATCACTTCTTGCGTGT 57.888 42.857 0.00 0.00 34.14 4.49
771 906 2.802247 TCTTGATCACTTCTTGCGTGTG 59.198 45.455 0.00 0.00 34.14 3.82
775 910 3.625313 TGATCACTTCTTGCGTGTGAAAA 59.375 39.130 0.00 0.00 42.80 2.29
794 948 6.001460 TGAAAATTTACACACCCTGTAGAGG 58.999 40.000 0.00 0.00 36.67 3.69
795 949 5.578157 AAATTTACACACCCTGTAGAGGT 57.422 39.130 5.02 0.00 36.67 3.85
796 950 6.691255 AAATTTACACACCCTGTAGAGGTA 57.309 37.500 5.02 0.00 36.67 3.08
798 952 6.886178 ATTTACACACCCTGTAGAGGTATT 57.114 37.500 5.02 0.00 36.67 1.89
807 961 6.832384 CACCCTGTAGAGGTATTAGTAACTGA 59.168 42.308 5.02 0.00 37.73 3.41
809 963 6.016108 CCCTGTAGAGGTATTAGTAACTGAGC 60.016 46.154 5.02 0.00 37.73 4.26
810 964 6.546403 CCTGTAGAGGTATTAGTAACTGAGCA 59.454 42.308 0.00 0.00 34.16 4.26
811 965 7.330900 TGTAGAGGTATTAGTAACTGAGCAC 57.669 40.000 0.00 0.00 0.00 4.40
812 966 6.888088 TGTAGAGGTATTAGTAACTGAGCACA 59.112 38.462 0.00 0.00 0.00 4.57
813 967 6.210287 AGAGGTATTAGTAACTGAGCACAC 57.790 41.667 0.00 0.00 0.00 3.82
814 968 5.127356 AGAGGTATTAGTAACTGAGCACACC 59.873 44.000 0.00 0.00 0.00 4.16
815 969 4.161754 AGGTATTAGTAACTGAGCACACCC 59.838 45.833 0.00 0.00 0.00 4.61
817 971 5.361857 GGTATTAGTAACTGAGCACACCCTA 59.638 44.000 0.00 0.00 0.00 3.53
819 973 2.890814 AGTAACTGAGCACACCCTAGT 58.109 47.619 0.00 0.00 0.00 2.57
821 975 4.413760 AGTAACTGAGCACACCCTAGTAA 58.586 43.478 0.00 0.00 0.00 2.24
827 981 1.550976 AGCACACCCTAGTAACTGAGC 59.449 52.381 0.00 0.00 0.00 4.26
828 982 1.275291 GCACACCCTAGTAACTGAGCA 59.725 52.381 0.00 0.00 0.00 4.26
830 984 2.299013 CACACCCTAGTAACTGAGCACA 59.701 50.000 0.00 0.00 0.00 4.57
832 986 3.006967 ACACCCTAGTAACTGAGCACAAG 59.993 47.826 0.00 0.00 0.00 3.16
841 995 4.357918 AACTGAGCACAAGTTAGGATGT 57.642 40.909 0.00 0.00 0.00 3.06
849 1003 4.623886 GCACAAGTTAGGATGTCTGGATCA 60.624 45.833 0.00 0.00 0.00 2.92
851 1005 6.686378 GCACAAGTTAGGATGTCTGGATCATA 60.686 42.308 0.00 0.00 0.00 2.15
852 1006 7.448420 CACAAGTTAGGATGTCTGGATCATAT 58.552 38.462 0.00 0.00 0.00 1.78
854 1008 7.935755 ACAAGTTAGGATGTCTGGATCATATTG 59.064 37.037 0.00 0.00 0.00 1.90
861 1015 7.668886 AGGATGTCTGGATCATATTGAAATTCC 59.331 37.037 0.00 0.00 0.00 3.01
862 1016 7.449395 GGATGTCTGGATCATATTGAAATTCCA 59.551 37.037 0.00 0.00 33.45 3.53
865 1019 9.511272 TGTCTGGATCATATTGAAATTCCATAG 57.489 33.333 0.00 0.00 33.90 2.23
866 1020 8.457261 GTCTGGATCATATTGAAATTCCATAGC 58.543 37.037 0.00 0.00 33.90 2.97
867 1021 7.613022 TCTGGATCATATTGAAATTCCATAGCC 59.387 37.037 0.00 0.00 33.90 3.93
868 1022 7.472741 TGGATCATATTGAAATTCCATAGCCT 58.527 34.615 0.00 0.00 30.49 4.58
870 1024 9.466497 GGATCATATTGAAATTCCATAGCCTTA 57.534 33.333 0.00 0.00 0.00 2.69
873 1027 9.866655 TCATATTGAAATTCCATAGCCTTACTT 57.133 29.630 0.00 0.00 0.00 2.24
884 1059 7.054124 TCCATAGCCTTACTTCTATGTTTTGG 58.946 38.462 8.03 0.00 40.10 3.28
885 1060 6.238759 CCATAGCCTTACTTCTATGTTTTGGC 60.239 42.308 8.03 0.00 40.10 4.52
894 1069 2.058057 CTATGTTTTGGCGTGGTTTGC 58.942 47.619 0.00 0.00 0.00 3.68
922 1111 0.104120 TCCGCCGGTGAACATGATAG 59.896 55.000 18.79 0.00 0.00 2.08
950 1139 2.026915 TGCCATGTCTGTGCTCTGTATT 60.027 45.455 0.00 0.00 0.00 1.89
952 1141 3.441572 GCCATGTCTGTGCTCTGTATTTT 59.558 43.478 0.00 0.00 0.00 1.82
953 1142 4.082571 GCCATGTCTGTGCTCTGTATTTTT 60.083 41.667 0.00 0.00 0.00 1.94
954 1143 5.396484 CCATGTCTGTGCTCTGTATTTTTG 58.604 41.667 0.00 0.00 0.00 2.44
955 1144 5.396484 CATGTCTGTGCTCTGTATTTTTGG 58.604 41.667 0.00 0.00 0.00 3.28
972 1161 2.853731 TGGTTTTTGCAGGTAACACG 57.146 45.000 9.07 0.00 41.41 4.49
973 1162 2.093106 TGGTTTTTGCAGGTAACACGT 58.907 42.857 9.07 0.00 41.41 4.49
974 1163 3.276857 TGGTTTTTGCAGGTAACACGTA 58.723 40.909 9.07 0.00 41.41 3.57
975 1164 3.312973 TGGTTTTTGCAGGTAACACGTAG 59.687 43.478 9.07 0.00 41.41 3.51
991 1180 3.933155 CGTAGTACGTACAGGTACAGG 57.067 52.381 26.55 6.36 44.08 4.00
993 1182 1.467920 AGTACGTACAGGTACAGGGC 58.532 55.000 26.55 0.00 44.08 5.19
994 1183 1.005215 AGTACGTACAGGTACAGGGCT 59.995 52.381 26.55 0.00 44.08 5.19
995 1184 1.403323 GTACGTACAGGTACAGGGCTC 59.597 57.143 20.67 0.00 41.84 4.70
996 1185 0.969409 ACGTACAGGTACAGGGCTCC 60.969 60.000 9.97 0.00 35.87 4.70
997 1186 0.683504 CGTACAGGTACAGGGCTCCT 60.684 60.000 9.97 0.00 35.87 3.69
998 1187 1.569653 GTACAGGTACAGGGCTCCTT 58.430 55.000 4.76 0.00 36.15 3.36
1001 1190 1.207791 CAGGTACAGGGCTCCTTCAT 58.792 55.000 0.00 0.00 0.00 2.57
1002 1191 1.134280 CAGGTACAGGGCTCCTTCATG 60.134 57.143 0.00 0.00 0.00 3.07
1003 1192 0.912486 GGTACAGGGCTCCTTCATGT 59.088 55.000 0.00 0.00 0.00 3.21
1005 1194 1.834263 GTACAGGGCTCCTTCATGTCT 59.166 52.381 0.00 0.00 0.00 3.41
1006 1195 0.617413 ACAGGGCTCCTTCATGTCTG 59.383 55.000 0.00 0.00 0.00 3.51
1007 1196 0.617413 CAGGGCTCCTTCATGTCTGT 59.383 55.000 0.00 0.00 0.00 3.41
1008 1197 0.617413 AGGGCTCCTTCATGTCTGTG 59.383 55.000 0.00 0.00 0.00 3.66
1010 1199 1.677217 GGGCTCCTTCATGTCTGTGAC 60.677 57.143 0.00 0.00 0.00 3.67
1011 1200 1.354040 GCTCCTTCATGTCTGTGACG 58.646 55.000 0.00 0.00 34.95 4.35
1013 1202 2.873609 CTCCTTCATGTCTGTGACGAG 58.126 52.381 0.00 0.00 34.95 4.18
1028 1217 2.560981 TGACGAGACTCAGCATGGTTAA 59.439 45.455 2.82 0.00 36.16 2.01
1032 1221 3.801050 CGAGACTCAGCATGGTTAATCTG 59.199 47.826 2.82 0.00 36.16 2.90
1042 1234 2.235016 TGGTTAATCTGCTGGCGTTTT 58.765 42.857 0.00 0.00 0.00 2.43
1106 1301 4.799678 ACAGTCAATCACGAGAACAGTAG 58.200 43.478 0.00 0.00 0.00 2.57
1125 1320 2.097160 GACATGCGCTCGTTGCTG 59.903 61.111 9.73 0.00 40.11 4.41
1222 1419 1.180029 GGGTGTCATTTGCAGCTCAT 58.820 50.000 0.00 0.00 35.03 2.90
1225 1422 2.029649 GGTGTCATTTGCAGCTCATTGT 60.030 45.455 0.00 0.00 0.00 2.71
1226 1423 2.984471 GTGTCATTTGCAGCTCATTGTG 59.016 45.455 0.00 0.00 0.00 3.33
1228 1425 3.240069 GTCATTTGCAGCTCATTGTGTC 58.760 45.455 0.00 0.00 0.00 3.67
1362 1559 1.079825 TCAGGCCAGTTAACTCCCCTA 59.920 52.381 18.53 6.49 0.00 3.53
1365 1562 2.307980 AGGCCAGTTAACTCCCCTAAAC 59.692 50.000 17.82 0.40 0.00 2.01
1366 1563 2.619849 GGCCAGTTAACTCCCCTAAACC 60.620 54.545 4.77 0.00 0.00 3.27
1367 1564 2.307980 GCCAGTTAACTCCCCTAAACCT 59.692 50.000 4.77 0.00 0.00 3.50
1368 1565 3.520721 GCCAGTTAACTCCCCTAAACCTA 59.479 47.826 4.77 0.00 0.00 3.08
1369 1566 4.019051 GCCAGTTAACTCCCCTAAACCTAA 60.019 45.833 4.77 0.00 0.00 2.69
1370 1567 5.515359 GCCAGTTAACTCCCCTAAACCTAAA 60.515 44.000 4.77 0.00 0.00 1.85
1374 1571 6.103057 AGTTAACTCCCCTAAACCTAAACCAA 59.897 38.462 1.12 0.00 0.00 3.67
1424 1762 2.659428 CTCCAATTCATTCCAGGGGAC 58.341 52.381 0.00 0.00 0.00 4.46
1425 1763 1.064758 TCCAATTCATTCCAGGGGACG 60.065 52.381 0.00 0.00 0.00 4.79
1462 1800 8.131100 CACTCATGAATTGTTCAAAACTACAGT 58.869 33.333 0.00 0.00 43.95 3.55
1463 1801 9.337396 ACTCATGAATTGTTCAAAACTACAGTA 57.663 29.630 0.00 0.00 43.95 2.74
1506 1844 2.422093 GCTAGAAGGTCCAATCCCCAAG 60.422 54.545 0.00 0.00 0.00 3.61
1518 1856 4.286808 CCAATCCCCAAGAAAATTGGTTCT 59.713 41.667 5.94 0.00 42.02 3.01
1521 1859 4.814967 TCCCCAAGAAAATTGGTTCTCTT 58.185 39.130 5.94 0.00 36.84 2.85
1524 1862 7.016296 TCCCCAAGAAAATTGGTTCTCTTTAT 58.984 34.615 5.94 0.00 36.84 1.40
1560 1901 7.227873 GCTTAGGCCTTTCTAGGAATAATCTT 58.772 38.462 12.58 0.00 45.05 2.40
1591 1932 1.985159 TCCCACTAACCATCAGCAACT 59.015 47.619 0.00 0.00 0.00 3.16
1603 1944 1.347707 TCAGCAACTCCACCCAGTTAG 59.652 52.381 0.00 0.00 34.70 2.34
1613 1954 5.221661 ACTCCACCCAGTTAGAACAACTTAG 60.222 44.000 0.00 0.00 0.00 2.18
1618 1959 4.455877 CCCAGTTAGAACAACTTAGCCTTG 59.544 45.833 0.00 0.00 0.00 3.61
1675 2025 3.288099 GGGCAATGGTCCAAGATGT 57.712 52.632 0.00 0.00 39.19 3.06
1677 2027 1.205417 GGGCAATGGTCCAAGATGTTG 59.795 52.381 0.00 0.00 39.19 3.33
1758 2116 9.553064 AATCTGACTTCGCTTCAAATATTAGAT 57.447 29.630 0.00 0.00 0.00 1.98
1759 2117 8.948631 TCTGACTTCGCTTCAAATATTAGATT 57.051 30.769 0.00 0.00 0.00 2.40
1790 2148 2.907458 AAGCTACAAGGGGAATTGCT 57.093 45.000 0.00 0.00 33.28 3.91
1803 2161 1.997606 GAATTGCTGCTTGACATTGGC 59.002 47.619 0.00 0.00 0.00 4.52
1821 2179 1.270893 GGCGATACCCTCCCTGAAATC 60.271 57.143 0.00 0.00 0.00 2.17
1848 2206 0.037590 TTACGCTGGGCCAGAACATT 59.962 50.000 37.07 16.55 32.44 2.71
1872 2230 0.329596 AAGGTCACATCCCAGCTTCC 59.670 55.000 0.00 0.00 0.00 3.46
1878 2236 0.343372 ACATCCCAGCTTCCCTAGGA 59.657 55.000 11.48 0.00 35.75 2.94
1888 2246 2.347731 CTTCCCTAGGAAACGCTTCAC 58.652 52.381 11.48 0.00 41.54 3.18
1908 2266 2.679837 ACGGCTGCAAGTGATAGATTTG 59.320 45.455 0.50 0.00 35.30 2.32
1911 2269 3.944015 GGCTGCAAGTGATAGATTTGTCT 59.056 43.478 0.50 0.00 35.30 3.41
1944 2302 6.796705 TTCGTTGGAGAAATTCCTACTTTC 57.203 37.500 6.30 0.00 45.90 2.62
1963 2321 6.762333 ACTTTCGGAAAGCTACTAAACCTTA 58.238 36.000 26.10 0.00 42.27 2.69
1964 2322 7.392418 ACTTTCGGAAAGCTACTAAACCTTAT 58.608 34.615 26.10 3.07 42.27 1.73
1966 2324 6.534475 TCGGAAAGCTACTAAACCTTATGA 57.466 37.500 0.00 0.00 0.00 2.15
1969 2327 6.592607 CGGAAAGCTACTAAACCTTATGAACA 59.407 38.462 0.00 0.00 0.00 3.18
1971 2329 8.398665 GGAAAGCTACTAAACCTTATGAACATG 58.601 37.037 0.00 0.00 0.00 3.21
1980 2338 5.255397 ACCTTATGAACATGAACCTTGGA 57.745 39.130 0.00 0.00 0.00 3.53
2061 2419 8.573885 ACAAACTGTAGTAATCTATATGCGCTA 58.426 33.333 9.73 0.00 0.00 4.26
2062 2420 9.406828 CAAACTGTAGTAATCTATATGCGCTAA 57.593 33.333 9.73 0.00 0.00 3.09
2115 2473 3.899052 CCAGATTTGGTCGGTAGGTTA 57.101 47.619 0.00 0.00 39.79 2.85
2122 2480 3.668141 TGGTCGGTAGGTTATCCACTA 57.332 47.619 0.00 0.00 35.89 2.74
2127 2485 5.451103 GGTCGGTAGGTTATCCACTAAACTC 60.451 48.000 0.00 0.00 38.37 3.01
2129 2487 5.359009 TCGGTAGGTTATCCACTAAACTCAG 59.641 44.000 0.00 0.00 38.37 3.35
2140 2498 4.023450 CCACTAAACTCAGACGTCTACACA 60.023 45.833 19.57 1.59 0.00 3.72
2143 2501 3.577649 AACTCAGACGTCTACACATGG 57.422 47.619 19.57 3.94 0.00 3.66
2157 2515 3.581024 CACATGGGTGGAAACAATCTG 57.419 47.619 0.00 0.00 46.06 2.90
2160 2518 1.890876 TGGGTGGAAACAATCTGTCG 58.109 50.000 0.00 0.00 46.06 4.35
2190 2548 4.382386 TCCTTTAAGCCTAGCAAACCTT 57.618 40.909 0.00 0.00 0.00 3.50
2225 2583 5.471797 TCGATTTGGATCTTAGCAACAACAA 59.528 36.000 0.00 0.00 0.00 2.83
2499 2857 7.752695 AGCTTAAACAACTCATTGCACTATAC 58.247 34.615 0.00 0.00 39.66 1.47
2517 2875 6.426937 CACTATACCTCTCTTCTAGCAGACTC 59.573 46.154 0.00 0.00 0.00 3.36
2595 2953 1.940613 GACCACAATAATCTCACGGGC 59.059 52.381 0.00 0.00 0.00 6.13
2632 2990 1.780503 AGGCAACCTTTTGAGCTTGT 58.219 45.000 0.00 0.00 34.24 3.16
2721 3079 7.719871 ACTTCTTAGCAAGTTAGACCTATCA 57.280 36.000 0.00 0.00 32.34 2.15
2743 3101 2.961526 TAATCGTCTCCAAGGAGCAC 57.038 50.000 11.31 9.32 41.71 4.40
2772 3130 0.773644 ATGGAGTGTTTGAGCACCCT 59.226 50.000 0.00 0.00 40.04 4.34
2871 3229 0.108615 CGCCGAGAACAGGAAGACAT 60.109 55.000 0.00 0.00 0.00 3.06
2881 3239 4.946784 ACAGGAAGACATTATCGTTTGC 57.053 40.909 0.00 0.00 0.00 3.68
2967 3325 3.325870 TGAGAAGATACCACAAGCAACG 58.674 45.455 0.00 0.00 0.00 4.10
2988 3346 4.097892 ACGTTTTCATTGTTGCCTTCTCTT 59.902 37.500 0.00 0.00 0.00 2.85
3201 3559 0.179179 GCAAAGCGTTGAGAGGCATC 60.179 55.000 16.93 0.00 39.08 3.91
3344 3702 1.379576 AAGGGAATCAGGCAGCTGC 60.380 57.895 30.88 30.88 41.14 5.25
3355 3713 0.247185 GGCAGCTGCAAGGCATTTAA 59.753 50.000 37.63 0.00 44.36 1.52
3374 3732 9.573133 GCATTTAAGCTTAGCTCAAAGAATAAA 57.427 29.630 7.36 7.29 38.25 1.40
3383 3741 8.662781 TTAGCTCAAAGAATAAACATCGCTAT 57.337 30.769 0.00 0.00 0.00 2.97
3409 3767 5.243981 ACATAGCTGATGCATTGGACTATC 58.756 41.667 0.00 0.00 42.74 2.08
3422 3780 4.607293 TGGACTATCTGCACCATGATAC 57.393 45.455 0.00 0.00 0.00 2.24
3424 3782 4.655649 TGGACTATCTGCACCATGATACTT 59.344 41.667 0.00 0.00 0.00 2.24
3537 3895 9.162764 GCAAGGTTCTACATTGATTCTAAACTA 57.837 33.333 8.23 0.00 41.91 2.24
3611 3971 5.968676 ATGGCTCCAGGTATAGTTGTTTA 57.031 39.130 0.00 0.00 0.00 2.01
3744 4104 5.910614 ACTTGTGGGGACGTATATAGTTTC 58.089 41.667 0.00 0.00 0.00 2.78
3816 4176 4.728772 TGTTCAGGAATGAACTCACCATT 58.271 39.130 18.78 0.00 45.98 3.16
3878 4238 3.795688 TTTTCTGGATTCCTGTCTGCT 57.204 42.857 3.95 0.00 0.00 4.24
3920 4280 1.059913 AACCAAGTAGCAGCAGGACT 58.940 50.000 0.00 0.00 0.00 3.85
3930 4290 1.089920 CAGCAGGACTGGAAAATCCG 58.910 55.000 1.01 0.00 43.19 4.18
4014 4374 2.699954 ACTGAACGGCTTAACATGAGG 58.300 47.619 0.00 0.00 0.00 3.86
4045 4405 3.129871 ACCCAAATGCACAAAATCAACG 58.870 40.909 0.00 0.00 0.00 4.10
4114 4571 0.694771 TGTCAGCTGGGCTTCTCAAT 59.305 50.000 15.13 0.00 36.40 2.57
4137 4595 4.263506 TGGAGCTAAAGAAGAAAAGGAGGG 60.264 45.833 0.00 0.00 0.00 4.30
4175 4668 9.462606 CTGTTGTAAAATTACCCCTTCTAAGAT 57.537 33.333 1.13 0.00 32.72 2.40
4183 4676 9.990868 AAATTACCCCTTCTAAGATTGTAATGT 57.009 29.630 0.00 0.00 31.01 2.71
4216 4709 4.160252 CACTTTATACCCCAGCTTGCATTT 59.840 41.667 0.00 0.00 0.00 2.32
4277 4770 7.701539 TTGTCTTTCATTATGTGCAATACCT 57.298 32.000 0.00 0.00 0.00 3.08
4325 4822 0.531090 GCGTCAGTGTGGTGGTTGTA 60.531 55.000 0.00 0.00 0.00 2.41
4330 4827 1.346395 CAGTGTGGTGGTTGTAGCCTA 59.654 52.381 0.00 0.00 0.00 3.93
4332 4829 0.323629 TGTGGTGGTTGTAGCCTAGC 59.676 55.000 0.00 0.00 0.00 3.42
4343 4840 5.046950 GGTTGTAGCCTAGCTGCTATAATCT 60.047 44.000 15.24 7.43 43.68 2.40
4344 4841 6.153000 GGTTGTAGCCTAGCTGCTATAATCTA 59.847 42.308 15.24 6.55 43.68 1.98
4345 4842 7.147811 GGTTGTAGCCTAGCTGCTATAATCTAT 60.148 40.741 15.24 0.00 43.68 1.98
4379 4888 2.746277 GCGCGGGATCACAACCTT 60.746 61.111 8.83 0.00 0.00 3.50
4613 6148 8.335532 TGAAAACAGAATATAGGTTGAAGTGG 57.664 34.615 0.00 0.00 0.00 4.00
4617 6152 4.576463 CAGAATATAGGTTGAAGTGGCACC 59.424 45.833 15.27 0.00 0.00 5.01
4628 6163 2.112297 TGGCACCCGTCAAAGGAC 59.888 61.111 0.00 0.00 40.77 3.85
4650 6185 2.159014 ACATTTGACATCATGCCATGGC 60.159 45.455 30.54 30.54 42.35 4.40
4692 6233 1.940613 GGAGGGCACTTGCTATTAACG 59.059 52.381 0.00 0.00 41.70 3.18
4694 6235 3.007635 GAGGGCACTTGCTATTAACGTT 58.992 45.455 5.88 5.88 41.70 3.99
4840 6465 9.740710 AAGTTTAAATTAGATAGACAGCCTGTT 57.259 29.630 0.00 0.00 0.00 3.16
4873 6498 7.865706 ATAGTACTGGTAGAAAATGGCAAAG 57.134 36.000 5.39 0.00 0.00 2.77
4876 6501 3.181423 ACTGGTAGAAAATGGCAAAGGGA 60.181 43.478 0.00 0.00 0.00 4.20
4877 6502 4.026052 CTGGTAGAAAATGGCAAAGGGAT 58.974 43.478 0.00 0.00 0.00 3.85
4892 6517 6.813649 GGCAAAGGGATGAAAAGTTAAGAATC 59.186 38.462 0.00 0.00 0.00 2.52
4906 6531 3.643159 AAGAATCGTTTGCCCACTTTC 57.357 42.857 0.00 0.00 0.00 2.62
4907 6532 2.863809 AGAATCGTTTGCCCACTTTCT 58.136 42.857 0.00 0.00 0.00 2.52
4908 6533 3.222603 AGAATCGTTTGCCCACTTTCTT 58.777 40.909 0.00 0.00 0.00 2.52
4909 6534 3.636764 AGAATCGTTTGCCCACTTTCTTT 59.363 39.130 0.00 0.00 0.00 2.52
4910 6535 4.825085 AGAATCGTTTGCCCACTTTCTTTA 59.175 37.500 0.00 0.00 0.00 1.85
4914 6539 5.064558 TCGTTTGCCCACTTTCTTTATGTA 58.935 37.500 0.00 0.00 0.00 2.29
4915 6540 5.049267 TCGTTTGCCCACTTTCTTTATGTAC 60.049 40.000 0.00 0.00 0.00 2.90
4916 6541 5.048991 CGTTTGCCCACTTTCTTTATGTACT 60.049 40.000 0.00 0.00 0.00 2.73
4917 6542 6.148150 CGTTTGCCCACTTTCTTTATGTACTA 59.852 38.462 0.00 0.00 0.00 1.82
4918 6543 7.148306 CGTTTGCCCACTTTCTTTATGTACTAT 60.148 37.037 0.00 0.00 0.00 2.12
4919 6544 7.859325 TTGCCCACTTTCTTTATGTACTATC 57.141 36.000 0.00 0.00 0.00 2.08
4921 6546 8.313944 TGCCCACTTTCTTTATGTACTATCTA 57.686 34.615 0.00 0.00 0.00 1.98
4922 6547 8.934697 TGCCCACTTTCTTTATGTACTATCTAT 58.065 33.333 0.00 0.00 0.00 1.98
4939 6564 8.603242 ACTATCTATATTAAACTGGGCAAACG 57.397 34.615 0.00 0.00 0.00 3.60
4940 6565 8.426489 ACTATCTATATTAAACTGGGCAAACGA 58.574 33.333 0.00 0.00 0.00 3.85
4942 6567 8.691661 ATCTATATTAAACTGGGCAAACGATT 57.308 30.769 0.00 0.00 0.00 3.34
4943 6568 8.149973 TCTATATTAAACTGGGCAAACGATTC 57.850 34.615 0.00 0.00 0.00 2.52
4944 6569 7.990886 TCTATATTAAACTGGGCAAACGATTCT 59.009 33.333 0.00 0.00 0.00 2.40
4945 6570 5.722021 ATTAAACTGGGCAAACGATTCTT 57.278 34.783 0.00 0.00 0.00 2.52
4946 6571 6.827586 ATTAAACTGGGCAAACGATTCTTA 57.172 33.333 0.00 0.00 0.00 2.10
4947 6572 6.636562 TTAAACTGGGCAAACGATTCTTAA 57.363 33.333 0.00 0.00 0.00 1.85
4948 6573 4.499037 AACTGGGCAAACGATTCTTAAC 57.501 40.909 0.00 0.00 0.00 2.01
4949 6574 3.751518 ACTGGGCAAACGATTCTTAACT 58.248 40.909 0.00 0.00 0.00 2.24
4950 6575 4.142038 ACTGGGCAAACGATTCTTAACTT 58.858 39.130 0.00 0.00 0.00 2.66
4951 6576 4.583073 ACTGGGCAAACGATTCTTAACTTT 59.417 37.500 0.00 0.00 0.00 2.66
4952 6577 5.116069 TGGGCAAACGATTCTTAACTTTC 57.884 39.130 0.00 0.00 0.00 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.760047 TTTGGCTCGGCTCGGCTC 62.760 66.667 0.00 1.75 0.00 4.70
13 14 4.767255 CTTTGGCTCGGCTCGGCT 62.767 66.667 0.00 0.00 0.00 5.52
17 18 3.130160 CTGGCTTTGGCTCGGCTC 61.130 66.667 0.00 0.00 38.73 4.70
18 19 4.729918 CCTGGCTTTGGCTCGGCT 62.730 66.667 0.00 0.00 38.73 5.52
25 26 1.821332 GATCCGAGCCTGGCTTTGG 60.821 63.158 26.42 26.42 39.88 3.28
26 27 0.677731 TTGATCCGAGCCTGGCTTTG 60.678 55.000 24.26 17.87 39.88 2.77
27 28 0.393537 CTTGATCCGAGCCTGGCTTT 60.394 55.000 24.26 8.35 39.88 3.51
28 29 1.222936 CTTGATCCGAGCCTGGCTT 59.777 57.895 24.26 6.46 39.88 4.35
29 30 2.906458 CTTGATCCGAGCCTGGCT 59.094 61.111 23.64 23.64 43.88 4.75
30 31 2.899339 GCTTGATCCGAGCCTGGC 60.899 66.667 11.65 11.65 35.00 4.85
31 32 1.227497 GAGCTTGATCCGAGCCTGG 60.227 63.158 12.94 0.00 41.50 4.45
32 33 1.591059 CGAGCTTGATCCGAGCCTG 60.591 63.158 12.94 4.38 41.50 4.85
33 34 2.790791 CCGAGCTTGATCCGAGCCT 61.791 63.158 12.94 3.24 41.50 4.58
34 35 2.279784 CCGAGCTTGATCCGAGCC 60.280 66.667 12.94 5.86 41.50 4.70
35 36 2.964389 GCCGAGCTTGATCCGAGC 60.964 66.667 1.22 9.51 40.93 5.03
36 37 1.299773 GAGCCGAGCTTGATCCGAG 60.300 63.158 1.22 0.00 39.88 4.63
37 38 2.808315 GAGCCGAGCTTGATCCGA 59.192 61.111 1.22 0.00 39.88 4.55
38 39 2.656651 CGAGCCGAGCTTGATCCG 60.657 66.667 1.22 0.00 42.27 4.18
39 40 2.279784 CCGAGCCGAGCTTGATCC 60.280 66.667 13.01 0.00 42.27 3.36
40 41 2.964389 GCCGAGCCGAGCTTGATC 60.964 66.667 13.01 0.00 42.27 2.92
41 42 3.438017 GAGCCGAGCCGAGCTTGAT 62.438 63.158 13.01 1.90 42.27 2.57
42 43 4.135153 GAGCCGAGCCGAGCTTGA 62.135 66.667 13.01 0.00 42.27 3.02
52 53 4.838486 GACACGAGCCGAGCCGAG 62.838 72.222 11.42 7.65 0.00 4.63
55 56 4.803426 CTGGACACGAGCCGAGCC 62.803 72.222 1.50 1.42 0.00 4.70
57 58 4.803426 GGCTGGACACGAGCCGAG 62.803 72.222 8.81 0.00 46.47 4.63
61 62 2.184579 GTAGGGCTGGACACGAGC 59.815 66.667 0.00 0.00 35.57 5.03
62 63 2.722201 GGGTAGGGCTGGACACGAG 61.722 68.421 0.00 0.00 0.00 4.18
63 64 2.682494 GGGTAGGGCTGGACACGA 60.682 66.667 0.00 0.00 0.00 4.35
64 65 3.000819 TGGGTAGGGCTGGACACG 61.001 66.667 0.00 0.00 0.00 4.49
65 66 2.185310 CTGTGGGTAGGGCTGGACAC 62.185 65.000 0.00 0.00 0.00 3.67
66 67 1.918293 CTGTGGGTAGGGCTGGACA 60.918 63.158 0.00 0.00 0.00 4.02
67 68 1.918800 ACTGTGGGTAGGGCTGGAC 60.919 63.158 0.00 0.00 0.00 4.02
68 69 1.918293 CACTGTGGGTAGGGCTGGA 60.918 63.158 0.00 0.00 0.00 3.86
69 70 2.671070 CACTGTGGGTAGGGCTGG 59.329 66.667 0.00 0.00 0.00 4.85
70 71 2.224159 ACCACTGTGGGTAGGGCTG 61.224 63.158 29.05 2.75 43.37 4.85
71 72 2.207189 ACCACTGTGGGTAGGGCT 59.793 61.111 29.05 4.90 43.37 5.19
72 73 2.351276 CACCACTGTGGGTAGGGC 59.649 66.667 29.05 0.00 43.37 5.19
81 82 5.540400 TTGCTACTTAAGTACACCACTGT 57.460 39.130 11.38 0.00 37.63 3.55
82 83 5.178809 GGTTTGCTACTTAAGTACACCACTG 59.821 44.000 11.38 1.74 39.66 3.66
83 84 5.303165 GGTTTGCTACTTAAGTACACCACT 58.697 41.667 11.38 0.00 39.66 4.00
84 85 4.453478 GGGTTTGCTACTTAAGTACACCAC 59.547 45.833 20.21 16.22 41.15 4.16
85 86 4.644498 GGGTTTGCTACTTAAGTACACCA 58.356 43.478 20.21 12.75 41.15 4.17
86 87 3.681417 CGGGTTTGCTACTTAAGTACACC 59.319 47.826 11.38 13.50 39.28 4.16
87 88 3.681417 CCGGGTTTGCTACTTAAGTACAC 59.319 47.826 11.38 4.53 0.00 2.90
88 89 3.865684 GCCGGGTTTGCTACTTAAGTACA 60.866 47.826 11.38 11.45 0.00 2.90
89 90 2.674852 GCCGGGTTTGCTACTTAAGTAC 59.325 50.000 11.38 9.21 0.00 2.73
90 91 2.355007 GGCCGGGTTTGCTACTTAAGTA 60.355 50.000 14.52 14.52 0.00 2.24
91 92 1.612462 GGCCGGGTTTGCTACTTAAGT 60.612 52.381 13.68 13.68 0.00 2.24
92 93 1.092348 GGCCGGGTTTGCTACTTAAG 58.908 55.000 2.18 0.00 0.00 1.85
93 94 0.694196 AGGCCGGGTTTGCTACTTAA 59.306 50.000 2.18 0.00 0.00 1.85
94 95 0.251073 GAGGCCGGGTTTGCTACTTA 59.749 55.000 2.18 0.00 0.00 2.24
95 96 1.002502 GAGGCCGGGTTTGCTACTT 60.003 57.895 2.18 0.00 0.00 2.24
96 97 1.774894 TTGAGGCCGGGTTTGCTACT 61.775 55.000 2.18 0.00 0.00 2.57
97 98 1.302993 TTGAGGCCGGGTTTGCTAC 60.303 57.895 2.18 0.00 0.00 3.58
98 99 1.002624 CTTGAGGCCGGGTTTGCTA 60.003 57.895 2.18 0.00 0.00 3.49
99 100 2.282462 CTTGAGGCCGGGTTTGCT 60.282 61.111 2.18 0.00 0.00 3.91
100 101 4.056125 GCTTGAGGCCGGGTTTGC 62.056 66.667 2.18 0.00 34.27 3.68
101 102 3.737172 CGCTTGAGGCCGGGTTTG 61.737 66.667 2.18 0.00 37.74 2.93
107 108 2.363711 TATAGCACCGCTTGAGGCCG 62.364 60.000 0.00 0.00 40.44 6.13
108 109 0.035458 ATATAGCACCGCTTGAGGCC 59.965 55.000 0.00 0.00 40.44 5.19
109 110 1.270305 TGATATAGCACCGCTTGAGGC 60.270 52.381 0.00 0.00 40.44 4.70
110 111 2.681706 CTGATATAGCACCGCTTGAGG 58.318 52.381 0.00 0.00 40.44 3.86
122 123 7.760794 GTCTGATGAGAGGATTTGCTGATATAG 59.239 40.741 0.00 0.00 0.00 1.31
123 124 7.234166 TGTCTGATGAGAGGATTTGCTGATATA 59.766 37.037 0.00 0.00 0.00 0.86
124 125 6.042897 TGTCTGATGAGAGGATTTGCTGATAT 59.957 38.462 0.00 0.00 0.00 1.63
125 126 5.364735 TGTCTGATGAGAGGATTTGCTGATA 59.635 40.000 0.00 0.00 0.00 2.15
126 127 4.163649 TGTCTGATGAGAGGATTTGCTGAT 59.836 41.667 0.00 0.00 0.00 2.90
127 128 3.516700 TGTCTGATGAGAGGATTTGCTGA 59.483 43.478 0.00 0.00 0.00 4.26
128 129 3.870274 TGTCTGATGAGAGGATTTGCTG 58.130 45.455 0.00 0.00 0.00 4.41
129 130 3.682155 GCTGTCTGATGAGAGGATTTGCT 60.682 47.826 0.00 0.00 34.54 3.91
130 131 2.613133 GCTGTCTGATGAGAGGATTTGC 59.387 50.000 0.00 0.00 34.54 3.68
131 132 2.864946 CGCTGTCTGATGAGAGGATTTG 59.135 50.000 0.00 0.00 34.54 2.32
132 133 2.762887 TCGCTGTCTGATGAGAGGATTT 59.237 45.455 0.00 0.00 34.54 2.17
133 134 2.382882 TCGCTGTCTGATGAGAGGATT 58.617 47.619 0.00 0.00 34.54 3.01
134 135 2.064434 TCGCTGTCTGATGAGAGGAT 57.936 50.000 0.00 0.00 34.54 3.24
135 136 2.064434 ATCGCTGTCTGATGAGAGGA 57.936 50.000 0.00 0.00 34.54 3.71
136 137 5.392919 CCTTATATCGCTGTCTGATGAGAGG 60.393 48.000 0.00 0.00 34.54 3.69
137 138 5.392919 CCCTTATATCGCTGTCTGATGAGAG 60.393 48.000 0.00 0.00 36.75 3.20
138 139 4.460731 CCCTTATATCGCTGTCTGATGAGA 59.539 45.833 0.00 0.00 0.00 3.27
139 140 4.742417 CCCTTATATCGCTGTCTGATGAG 58.258 47.826 0.00 0.00 0.00 2.90
140 141 3.056536 GCCCTTATATCGCTGTCTGATGA 60.057 47.826 0.00 0.00 0.00 2.92
141 142 3.257393 GCCCTTATATCGCTGTCTGATG 58.743 50.000 0.00 0.00 0.00 3.07
142 143 2.899900 TGCCCTTATATCGCTGTCTGAT 59.100 45.455 0.00 0.00 0.00 2.90
143 144 2.316108 TGCCCTTATATCGCTGTCTGA 58.684 47.619 0.00 0.00 0.00 3.27
144 145 2.820059 TGCCCTTATATCGCTGTCTG 57.180 50.000 0.00 0.00 0.00 3.51
145 146 5.246203 TCTTTATGCCCTTATATCGCTGTCT 59.754 40.000 0.00 0.00 0.00 3.41
146 147 5.479306 TCTTTATGCCCTTATATCGCTGTC 58.521 41.667 0.00 0.00 0.00 3.51
147 148 5.483685 TCTTTATGCCCTTATATCGCTGT 57.516 39.130 0.00 0.00 0.00 4.40
148 149 5.122396 GGTTCTTTATGCCCTTATATCGCTG 59.878 44.000 0.00 0.00 0.00 5.18
149 150 5.246307 GGTTCTTTATGCCCTTATATCGCT 58.754 41.667 0.00 0.00 0.00 4.93
150 151 4.092968 CGGTTCTTTATGCCCTTATATCGC 59.907 45.833 0.00 0.00 0.00 4.58
151 152 4.630069 CCGGTTCTTTATGCCCTTATATCG 59.370 45.833 0.00 0.00 0.00 2.92
152 153 4.941873 CCCGGTTCTTTATGCCCTTATATC 59.058 45.833 0.00 0.00 0.00 1.63
153 154 4.600111 TCCCGGTTCTTTATGCCCTTATAT 59.400 41.667 0.00 0.00 0.00 0.86
154 155 3.975312 TCCCGGTTCTTTATGCCCTTATA 59.025 43.478 0.00 0.00 0.00 0.98
155 156 2.781174 TCCCGGTTCTTTATGCCCTTAT 59.219 45.455 0.00 0.00 0.00 1.73
156 157 2.198336 TCCCGGTTCTTTATGCCCTTA 58.802 47.619 0.00 0.00 0.00 2.69
157 158 0.996583 TCCCGGTTCTTTATGCCCTT 59.003 50.000 0.00 0.00 0.00 3.95
158 159 1.222567 ATCCCGGTTCTTTATGCCCT 58.777 50.000 0.00 0.00 0.00 5.19
159 160 2.067365 AATCCCGGTTCTTTATGCCC 57.933 50.000 0.00 0.00 0.00 5.36
160 161 4.065789 CTCTAATCCCGGTTCTTTATGCC 58.934 47.826 0.00 0.00 0.00 4.40
161 162 4.957296 TCTCTAATCCCGGTTCTTTATGC 58.043 43.478 0.00 0.00 0.00 3.14
162 163 6.163135 ACTCTCTAATCCCGGTTCTTTATG 57.837 41.667 0.00 0.00 0.00 1.90
163 164 6.408206 CCAACTCTCTAATCCCGGTTCTTTAT 60.408 42.308 0.00 0.00 0.00 1.40
164 165 5.105064 CCAACTCTCTAATCCCGGTTCTTTA 60.105 44.000 0.00 0.00 0.00 1.85
165 166 4.323562 CCAACTCTCTAATCCCGGTTCTTT 60.324 45.833 0.00 0.00 0.00 2.52
166 167 3.197983 CCAACTCTCTAATCCCGGTTCTT 59.802 47.826 0.00 0.00 0.00 2.52
167 168 2.766828 CCAACTCTCTAATCCCGGTTCT 59.233 50.000 0.00 0.00 0.00 3.01
168 169 2.158943 CCCAACTCTCTAATCCCGGTTC 60.159 54.545 0.00 0.00 0.00 3.62
169 170 1.838077 CCCAACTCTCTAATCCCGGTT 59.162 52.381 0.00 0.00 0.00 4.44
170 171 1.497161 CCCAACTCTCTAATCCCGGT 58.503 55.000 0.00 0.00 0.00 5.28
171 172 0.759346 CCCCAACTCTCTAATCCCGG 59.241 60.000 0.00 0.00 0.00 5.73
172 173 0.759346 CCCCCAACTCTCTAATCCCG 59.241 60.000 0.00 0.00 0.00 5.14
173 174 1.894699 ACCCCCAACTCTCTAATCCC 58.105 55.000 0.00 0.00 0.00 3.85
174 175 2.704596 GGTACCCCCAACTCTCTAATCC 59.295 54.545 0.00 0.00 0.00 3.01
175 176 2.364647 CGGTACCCCCAACTCTCTAATC 59.635 54.545 6.25 0.00 0.00 1.75
176 177 2.023695 TCGGTACCCCCAACTCTCTAAT 60.024 50.000 6.25 0.00 0.00 1.73
177 178 1.358787 TCGGTACCCCCAACTCTCTAA 59.641 52.381 6.25 0.00 0.00 2.10
178 179 1.002069 TCGGTACCCCCAACTCTCTA 58.998 55.000 6.25 0.00 0.00 2.43
179 180 0.338814 ATCGGTACCCCCAACTCTCT 59.661 55.000 6.25 0.00 0.00 3.10
180 181 1.201424 AATCGGTACCCCCAACTCTC 58.799 55.000 6.25 0.00 0.00 3.20
181 182 1.558294 GAAATCGGTACCCCCAACTCT 59.442 52.381 6.25 0.00 0.00 3.24
182 183 1.407851 GGAAATCGGTACCCCCAACTC 60.408 57.143 6.25 0.00 0.00 3.01
183 184 0.622136 GGAAATCGGTACCCCCAACT 59.378 55.000 6.25 0.00 0.00 3.16
184 185 0.745486 CGGAAATCGGTACCCCCAAC 60.745 60.000 6.25 0.00 34.75 3.77
185 186 1.603306 CGGAAATCGGTACCCCCAA 59.397 57.895 6.25 0.00 34.75 4.12
186 187 3.311725 CGGAAATCGGTACCCCCA 58.688 61.111 6.25 0.00 34.75 4.96
195 196 1.308998 CCTCCAAATCCCGGAAATCG 58.691 55.000 0.73 0.00 38.88 3.34
196 197 2.427095 CAACCTCCAAATCCCGGAAATC 59.573 50.000 0.73 0.00 30.33 2.17
197 198 2.456577 CAACCTCCAAATCCCGGAAAT 58.543 47.619 0.73 0.00 30.33 2.17
198 199 1.549037 CCAACCTCCAAATCCCGGAAA 60.549 52.381 0.73 0.00 30.33 3.13
199 200 0.039035 CCAACCTCCAAATCCCGGAA 59.961 55.000 0.73 0.00 30.33 4.30
200 201 1.137594 ACCAACCTCCAAATCCCGGA 61.138 55.000 0.73 0.00 0.00 5.14
201 202 0.965363 CACCAACCTCCAAATCCCGG 60.965 60.000 0.00 0.00 0.00 5.73
202 203 0.251165 ACACCAACCTCCAAATCCCG 60.251 55.000 0.00 0.00 0.00 5.14
203 204 1.893137 GAACACCAACCTCCAAATCCC 59.107 52.381 0.00 0.00 0.00 3.85
204 205 2.593026 TGAACACCAACCTCCAAATCC 58.407 47.619 0.00 0.00 0.00 3.01
205 206 4.664150 TTTGAACACCAACCTCCAAATC 57.336 40.909 0.00 0.00 33.85 2.17
206 207 4.383661 GGTTTTGAACACCAACCTCCAAAT 60.384 41.667 0.00 0.00 37.56 2.32
207 208 3.055747 GGTTTTGAACACCAACCTCCAAA 60.056 43.478 0.00 0.00 37.56 3.28
208 209 2.498078 GGTTTTGAACACCAACCTCCAA 59.502 45.455 0.00 0.00 37.56 3.53
209 210 2.104170 GGTTTTGAACACCAACCTCCA 58.896 47.619 0.00 0.00 37.56 3.86
210 211 2.104170 TGGTTTTGAACACCAACCTCC 58.896 47.619 0.00 0.00 41.58 4.30
217 218 3.605231 CGTACGACATGGTTTTGAACACC 60.605 47.826 10.44 0.00 34.52 4.16
218 219 3.245754 TCGTACGACATGGTTTTGAACAC 59.754 43.478 15.28 0.00 0.00 3.32
219 220 3.455327 TCGTACGACATGGTTTTGAACA 58.545 40.909 15.28 0.00 0.00 3.18
220 221 3.492011 ACTCGTACGACATGGTTTTGAAC 59.508 43.478 15.28 0.00 0.00 3.18
221 222 3.719924 ACTCGTACGACATGGTTTTGAA 58.280 40.909 15.28 0.00 0.00 2.69
222 223 3.374220 ACTCGTACGACATGGTTTTGA 57.626 42.857 15.28 0.00 0.00 2.69
223 224 3.491639 TGAACTCGTACGACATGGTTTTG 59.508 43.478 15.28 3.76 0.00 2.44
224 225 3.719924 TGAACTCGTACGACATGGTTTT 58.280 40.909 15.28 0.00 0.00 2.43
225 226 3.314553 CTGAACTCGTACGACATGGTTT 58.685 45.455 15.28 0.74 0.00 3.27
226 227 2.352421 CCTGAACTCGTACGACATGGTT 60.352 50.000 15.28 16.54 0.00 3.67
227 228 1.201647 CCTGAACTCGTACGACATGGT 59.798 52.381 15.28 8.03 0.00 3.55
228 229 1.471287 TCCTGAACTCGTACGACATGG 59.529 52.381 15.28 13.41 0.00 3.66
229 230 2.913777 TCCTGAACTCGTACGACATG 57.086 50.000 15.28 7.71 0.00 3.21
230 231 4.451629 AAATCCTGAACTCGTACGACAT 57.548 40.909 15.28 5.76 0.00 3.06
231 232 3.928727 AAATCCTGAACTCGTACGACA 57.071 42.857 15.28 10.35 0.00 4.35
232 233 6.520175 GTTTTAAATCCTGAACTCGTACGAC 58.480 40.000 15.28 5.58 0.00 4.34
233 234 5.343058 CGTTTTAAATCCTGAACTCGTACGA 59.657 40.000 18.41 18.41 0.00 3.43
234 235 5.443693 CCGTTTTAAATCCTGAACTCGTACG 60.444 44.000 9.53 9.53 0.00 3.67
235 236 5.634859 TCCGTTTTAAATCCTGAACTCGTAC 59.365 40.000 0.00 0.00 0.00 3.67
236 237 5.634859 GTCCGTTTTAAATCCTGAACTCGTA 59.365 40.000 0.00 0.00 0.00 3.43
237 238 4.450080 GTCCGTTTTAAATCCTGAACTCGT 59.550 41.667 0.00 0.00 0.00 4.18
238 239 4.689345 AGTCCGTTTTAAATCCTGAACTCG 59.311 41.667 0.00 0.00 0.00 4.18
239 240 6.204108 TGAAGTCCGTTTTAAATCCTGAACTC 59.796 38.462 0.00 0.00 0.00 3.01
240 241 6.017357 GTGAAGTCCGTTTTAAATCCTGAACT 60.017 38.462 0.00 0.00 0.00 3.01
241 242 6.017357 AGTGAAGTCCGTTTTAAATCCTGAAC 60.017 38.462 0.00 0.00 0.00 3.18
242 243 6.059484 AGTGAAGTCCGTTTTAAATCCTGAA 58.941 36.000 0.00 0.00 0.00 3.02
243 244 5.617252 AGTGAAGTCCGTTTTAAATCCTGA 58.383 37.500 0.00 0.00 0.00 3.86
244 245 5.941948 AGTGAAGTCCGTTTTAAATCCTG 57.058 39.130 0.00 0.00 0.00 3.86
245 246 5.826208 ACAAGTGAAGTCCGTTTTAAATCCT 59.174 36.000 0.00 0.00 0.00 3.24
246 247 6.017357 AGACAAGTGAAGTCCGTTTTAAATCC 60.017 38.462 0.00 0.00 36.68 3.01
247 248 6.956047 AGACAAGTGAAGTCCGTTTTAAATC 58.044 36.000 0.00 0.00 36.68 2.17
248 249 6.937436 AGACAAGTGAAGTCCGTTTTAAAT 57.063 33.333 0.00 0.00 36.68 1.40
249 250 6.817641 TGTAGACAAGTGAAGTCCGTTTTAAA 59.182 34.615 0.00 0.00 36.68 1.52
250 251 6.339730 TGTAGACAAGTGAAGTCCGTTTTAA 58.660 36.000 0.00 0.00 36.68 1.52
251 252 5.904941 TGTAGACAAGTGAAGTCCGTTTTA 58.095 37.500 0.00 0.00 36.68 1.52
252 253 4.761975 TGTAGACAAGTGAAGTCCGTTTT 58.238 39.130 0.00 0.00 36.68 2.43
253 254 4.395959 TGTAGACAAGTGAAGTCCGTTT 57.604 40.909 0.00 0.00 36.68 3.60
254 255 4.117685 GTTGTAGACAAGTGAAGTCCGTT 58.882 43.478 0.00 0.00 36.39 4.44
255 256 3.714391 GTTGTAGACAAGTGAAGTCCGT 58.286 45.455 0.00 0.00 36.39 4.69
256 257 2.724690 CGTTGTAGACAAGTGAAGTCCG 59.275 50.000 0.00 0.00 36.39 4.79
257 258 3.973657 TCGTTGTAGACAAGTGAAGTCC 58.026 45.455 0.00 0.00 36.39 3.85
258 259 3.425858 GCTCGTTGTAGACAAGTGAAGTC 59.574 47.826 0.00 0.00 36.39 3.01
259 260 3.381949 GCTCGTTGTAGACAAGTGAAGT 58.618 45.455 0.00 0.00 36.39 3.01
260 261 2.405357 CGCTCGTTGTAGACAAGTGAAG 59.595 50.000 0.00 0.00 36.39 3.02
261 262 2.390938 CGCTCGTTGTAGACAAGTGAA 58.609 47.619 0.00 0.00 36.39 3.18
262 263 1.929038 GCGCTCGTTGTAGACAAGTGA 60.929 52.381 0.00 0.00 36.39 3.41
263 264 0.435008 GCGCTCGTTGTAGACAAGTG 59.565 55.000 0.00 0.00 36.39 3.16
264 265 0.031585 TGCGCTCGTTGTAGACAAGT 59.968 50.000 9.73 0.00 36.39 3.16
265 266 1.350193 ATGCGCTCGTTGTAGACAAG 58.650 50.000 9.73 0.00 36.39 3.16
292 293 3.253432 CCTGCTTTTCTTGGGTCAAGTAC 59.747 47.826 7.42 0.00 41.66 2.73
325 326 2.411935 GCCGTCGTGATTATCATGCATG 60.412 50.000 21.07 21.07 33.54 4.06
348 349 3.156293 TGTGTAACGGCTTACTAGTCCA 58.844 45.455 0.00 0.00 42.39 4.02
407 481 2.600731 CAGCCTCCATCGAATCGTATC 58.399 52.381 1.52 0.00 0.00 2.24
412 486 0.465705 TGTCCAGCCTCCATCGAATC 59.534 55.000 0.00 0.00 0.00 2.52
413 487 1.135094 ATGTCCAGCCTCCATCGAAT 58.865 50.000 0.00 0.00 0.00 3.34
414 488 0.178767 CATGTCCAGCCTCCATCGAA 59.821 55.000 0.00 0.00 0.00 3.71
415 489 1.825341 CATGTCCAGCCTCCATCGA 59.175 57.895 0.00 0.00 0.00 3.59
416 490 1.890979 GCATGTCCAGCCTCCATCG 60.891 63.158 0.00 0.00 0.00 3.84
417 491 0.178998 ATGCATGTCCAGCCTCCATC 60.179 55.000 0.00 0.00 0.00 3.51
527 601 1.736586 CTGAGCTAGCTACCGGGTG 59.263 63.158 19.38 0.00 0.00 4.61
646 730 1.803334 ACGTTTCAAATGCTCGGCTA 58.197 45.000 0.00 0.00 0.00 3.93
721 814 2.117156 TAGCGTACCTCTGCCCGTC 61.117 63.158 0.00 0.00 0.00 4.79
725 818 0.664224 GAGAGTAGCGTACCTCTGCC 59.336 60.000 4.35 0.00 0.00 4.85
757 892 5.741510 TGTAAATTTTCACACGCAAGAAGTG 59.258 36.000 0.00 0.00 44.14 3.16
768 903 6.358178 TCTACAGGGTGTGTAAATTTTCACA 58.642 36.000 22.22 22.22 41.28 3.58
769 904 6.072673 CCTCTACAGGGTGTGTAAATTTTCAC 60.073 42.308 18.08 18.08 41.28 3.18
770 905 6.001460 CCTCTACAGGGTGTGTAAATTTTCA 58.999 40.000 0.00 0.00 41.28 2.69
771 906 6.002082 ACCTCTACAGGGTGTGTAAATTTTC 58.998 40.000 0.00 0.00 45.53 2.29
775 910 6.886178 AATACCTCTACAGGGTGTGTAAAT 57.114 37.500 0.00 0.00 45.53 1.40
784 938 6.016108 GCTCAGTTACTAATACCTCTACAGGG 60.016 46.154 0.00 0.00 45.53 4.45
786 940 7.067129 TGTGCTCAGTTACTAATACCTCTACAG 59.933 40.741 0.00 0.00 0.00 2.74
787 941 6.888088 TGTGCTCAGTTACTAATACCTCTACA 59.112 38.462 0.00 0.00 0.00 2.74
794 948 5.340439 AGGGTGTGCTCAGTTACTAATAC 57.660 43.478 0.00 0.00 0.00 1.89
795 949 6.192773 ACTAGGGTGTGCTCAGTTACTAATA 58.807 40.000 0.00 0.00 0.00 0.98
796 950 5.024118 ACTAGGGTGTGCTCAGTTACTAAT 58.976 41.667 0.00 0.00 0.00 1.73
798 952 4.043608 ACTAGGGTGTGCTCAGTTACTA 57.956 45.455 0.00 0.00 0.00 1.82
807 961 1.550976 GCTCAGTTACTAGGGTGTGCT 59.449 52.381 0.00 0.00 0.00 4.40
809 963 2.299013 TGTGCTCAGTTACTAGGGTGTG 59.701 50.000 0.00 0.00 0.00 3.82
810 964 2.605257 TGTGCTCAGTTACTAGGGTGT 58.395 47.619 0.00 0.00 0.00 4.16
811 965 3.006967 ACTTGTGCTCAGTTACTAGGGTG 59.993 47.826 0.00 0.00 0.00 4.61
812 966 3.240302 ACTTGTGCTCAGTTACTAGGGT 58.760 45.455 0.00 0.00 0.00 4.34
813 967 3.963428 ACTTGTGCTCAGTTACTAGGG 57.037 47.619 0.00 0.00 0.00 3.53
814 968 5.185249 TCCTAACTTGTGCTCAGTTACTAGG 59.815 44.000 0.00 8.30 0.00 3.02
815 969 6.268825 TCCTAACTTGTGCTCAGTTACTAG 57.731 41.667 0.00 0.00 0.00 2.57
817 971 5.012148 ACATCCTAACTTGTGCTCAGTTACT 59.988 40.000 6.68 0.00 0.00 2.24
819 973 5.246203 AGACATCCTAACTTGTGCTCAGTTA 59.754 40.000 9.11 9.11 0.00 2.24
821 975 3.580458 AGACATCCTAACTTGTGCTCAGT 59.420 43.478 0.00 0.00 0.00 3.41
827 981 5.089970 TGATCCAGACATCCTAACTTGTG 57.910 43.478 0.00 0.00 0.00 3.33
828 982 5.965033 ATGATCCAGACATCCTAACTTGT 57.035 39.130 0.00 0.00 0.00 3.16
830 984 8.267620 TCAATATGATCCAGACATCCTAACTT 57.732 34.615 0.00 0.00 0.00 2.66
832 986 8.908786 TTTCAATATGATCCAGACATCCTAAC 57.091 34.615 0.00 0.00 0.00 2.34
841 995 7.613022 GGCTATGGAATTTCAATATGATCCAGA 59.387 37.037 7.13 2.75 36.75 3.86
852 1006 9.342308 CATAGAAGTAAGGCTATGGAATTTCAA 57.658 33.333 0.00 0.00 40.00 2.69
854 1008 8.910351 ACATAGAAGTAAGGCTATGGAATTTC 57.090 34.615 12.74 0.00 45.12 2.17
861 1015 6.511767 CGCCAAAACATAGAAGTAAGGCTATG 60.512 42.308 0.00 0.00 45.87 2.23
862 1016 5.527582 CGCCAAAACATAGAAGTAAGGCTAT 59.472 40.000 0.00 0.00 37.48 2.97
864 1018 3.689649 CGCCAAAACATAGAAGTAAGGCT 59.310 43.478 0.00 0.00 37.48 4.58
865 1019 3.439129 ACGCCAAAACATAGAAGTAAGGC 59.561 43.478 0.00 0.00 36.33 4.35
866 1020 4.142687 CCACGCCAAAACATAGAAGTAAGG 60.143 45.833 0.00 0.00 0.00 2.69
867 1021 4.454504 ACCACGCCAAAACATAGAAGTAAG 59.545 41.667 0.00 0.00 0.00 2.34
868 1022 4.391155 ACCACGCCAAAACATAGAAGTAA 58.609 39.130 0.00 0.00 0.00 2.24
870 1024 2.858745 ACCACGCCAAAACATAGAAGT 58.141 42.857 0.00 0.00 0.00 3.01
871 1025 3.915437 AACCACGCCAAAACATAGAAG 57.085 42.857 0.00 0.00 0.00 2.85
872 1026 3.797184 GCAAACCACGCCAAAACATAGAA 60.797 43.478 0.00 0.00 0.00 2.10
873 1027 2.287909 GCAAACCACGCCAAAACATAGA 60.288 45.455 0.00 0.00 0.00 1.98
874 1028 2.058057 GCAAACCACGCCAAAACATAG 58.942 47.619 0.00 0.00 0.00 2.23
877 1052 4.504132 GCAAACCACGCCAAAACA 57.496 50.000 0.00 0.00 0.00 2.83
894 1069 1.300931 CACCGGCGGATCTACATGG 60.301 63.158 35.78 1.17 0.00 3.66
899 1074 0.104120 CATGTTCACCGGCGGATCTA 59.896 55.000 35.78 14.78 0.00 1.98
901 1076 0.532862 ATCATGTTCACCGGCGGATC 60.533 55.000 35.78 18.66 0.00 3.36
902 1077 0.756294 TATCATGTTCACCGGCGGAT 59.244 50.000 35.78 15.46 0.00 4.18
903 1078 0.104120 CTATCATGTTCACCGGCGGA 59.896 55.000 35.78 10.47 0.00 5.54
922 1111 1.332997 GCACAGACATGGCAGCTTATC 59.667 52.381 0.00 0.00 0.00 1.75
950 1139 3.927142 CGTGTTACCTGCAAAAACCAAAA 59.073 39.130 0.00 0.00 0.00 2.44
952 1141 2.492484 ACGTGTTACCTGCAAAAACCAA 59.508 40.909 0.00 0.00 0.00 3.67
953 1142 2.093106 ACGTGTTACCTGCAAAAACCA 58.907 42.857 0.00 0.00 0.00 3.67
954 1143 2.855660 ACGTGTTACCTGCAAAAACC 57.144 45.000 0.00 0.00 0.00 3.27
955 1144 4.541085 ACTACGTGTTACCTGCAAAAAC 57.459 40.909 0.00 0.00 0.00 2.43
972 1161 2.356069 GCCCTGTACCTGTACGTACTAC 59.644 54.545 25.12 18.80 39.51 2.73
973 1162 2.239654 AGCCCTGTACCTGTACGTACTA 59.760 50.000 25.12 11.61 39.51 1.82
974 1163 1.005215 AGCCCTGTACCTGTACGTACT 59.995 52.381 25.12 9.07 39.51 2.73
975 1164 1.403323 GAGCCCTGTACCTGTACGTAC 59.597 57.143 18.90 18.90 38.85 3.67
976 1165 1.683011 GGAGCCCTGTACCTGTACGTA 60.683 57.143 0.00 0.00 38.85 3.57
981 1170 0.178903 TGAAGGAGCCCTGTACCTGT 60.179 55.000 0.00 0.00 32.13 4.00
982 1171 1.134280 CATGAAGGAGCCCTGTACCTG 60.134 57.143 0.00 0.00 32.13 4.00
986 1175 1.833630 CAGACATGAAGGAGCCCTGTA 59.166 52.381 0.00 0.00 32.13 2.74
987 1176 0.617413 CAGACATGAAGGAGCCCTGT 59.383 55.000 0.00 0.00 32.13 4.00
988 1177 0.617413 ACAGACATGAAGGAGCCCTG 59.383 55.000 0.00 0.00 32.13 4.45
989 1178 0.617413 CACAGACATGAAGGAGCCCT 59.383 55.000 0.00 0.00 33.87 5.19
990 1179 0.615331 TCACAGACATGAAGGAGCCC 59.385 55.000 0.00 0.00 0.00 5.19
991 1180 1.731720 GTCACAGACATGAAGGAGCC 58.268 55.000 0.00 0.00 32.09 4.70
993 1182 2.489722 TCTCGTCACAGACATGAAGGAG 59.510 50.000 0.00 0.00 33.22 3.69
994 1183 2.229062 GTCTCGTCACAGACATGAAGGA 59.771 50.000 0.00 0.00 42.25 3.36
995 1184 2.230025 AGTCTCGTCACAGACATGAAGG 59.770 50.000 0.00 0.00 44.73 3.46
996 1185 3.057946 TGAGTCTCGTCACAGACATGAAG 60.058 47.826 0.00 0.00 44.73 3.02
997 1186 2.884639 TGAGTCTCGTCACAGACATGAA 59.115 45.455 0.00 0.00 44.73 2.57
998 1187 2.485814 CTGAGTCTCGTCACAGACATGA 59.514 50.000 0.00 0.00 44.73 3.07
1001 1190 0.593618 GCTGAGTCTCGTCACAGACA 59.406 55.000 9.26 0.00 44.73 3.41
1002 1191 0.593618 TGCTGAGTCTCGTCACAGAC 59.406 55.000 0.00 0.51 42.91 3.51
1003 1192 1.200948 CATGCTGAGTCTCGTCACAGA 59.799 52.381 0.00 0.00 32.90 3.41
1005 1194 0.244721 CCATGCTGAGTCTCGTCACA 59.755 55.000 0.00 0.00 0.00 3.58
1006 1195 0.244994 ACCATGCTGAGTCTCGTCAC 59.755 55.000 0.00 0.00 0.00 3.67
1007 1196 0.969149 AACCATGCTGAGTCTCGTCA 59.031 50.000 0.00 0.00 0.00 4.35
1008 1197 2.941453 TAACCATGCTGAGTCTCGTC 57.059 50.000 0.00 0.00 0.00 4.20
1010 1199 3.801050 CAGATTAACCATGCTGAGTCTCG 59.199 47.826 0.00 0.00 0.00 4.04
1011 1200 3.559242 GCAGATTAACCATGCTGAGTCTC 59.441 47.826 0.00 0.00 37.00 3.36
1013 1202 3.959573 GCAGATTAACCATGCTGAGTC 57.040 47.619 0.00 0.00 37.00 3.36
1028 1217 0.038892 CAGCAAAAACGCCAGCAGAT 60.039 50.000 0.00 0.00 0.00 2.90
1032 1221 2.028043 AGCAGCAAAAACGCCAGC 59.972 55.556 0.00 0.00 34.62 4.85
1042 1234 1.003464 TCCATAGAACAGCAGCAGCAA 59.997 47.619 3.17 0.00 45.49 3.91
1106 1301 2.397252 GCAACGAGCGCATGTCTC 59.603 61.111 11.47 0.00 0.00 3.36
1125 1320 1.459450 TGGTAGCCGCTTTGAAATCC 58.541 50.000 0.00 0.00 0.00 3.01
1222 1419 2.110213 GACACGCCCTGGACACAA 59.890 61.111 0.00 0.00 0.00 3.33
1362 1559 3.826729 GCTCATGGAGTTGGTTTAGGTTT 59.173 43.478 0.00 0.00 31.39 3.27
1365 1562 3.012518 CAGCTCATGGAGTTGGTTTAGG 58.987 50.000 2.57 0.00 37.27 2.69
1424 1762 3.790152 TCATGAGTGAGTCAGGAATCG 57.210 47.619 1.66 0.00 42.95 3.34
1462 1800 7.624549 AGCATGTTTCCAGAAAGAACTAGATA 58.375 34.615 0.00 0.00 0.00 1.98
1463 1801 6.479884 AGCATGTTTCCAGAAAGAACTAGAT 58.520 36.000 0.00 0.00 0.00 1.98
1469 1807 5.707298 CCTTCTAGCATGTTTCCAGAAAGAA 59.293 40.000 0.00 0.00 0.00 2.52
1477 1815 3.350219 TGGACCTTCTAGCATGTTTCC 57.650 47.619 0.00 0.00 0.00 3.13
1541 1882 7.394641 CCCCAATAAGATTATTCCTAGAAAGGC 59.605 40.741 0.00 0.00 43.31 4.35
1542 1883 8.448816 ACCCCAATAAGATTATTCCTAGAAAGG 58.551 37.037 0.00 0.00 45.21 3.11
1577 1918 1.004277 GGGTGGAGTTGCTGATGGTTA 59.996 52.381 0.00 0.00 0.00 2.85
1580 1921 0.679002 CTGGGTGGAGTTGCTGATGG 60.679 60.000 0.00 0.00 0.00 3.51
1591 1932 4.504340 GCTAAGTTGTTCTAACTGGGTGGA 60.504 45.833 0.00 0.00 0.00 4.02
1603 1944 7.425606 TGATTTTCTTCAAGGCTAAGTTGTTC 58.574 34.615 0.00 0.00 0.00 3.18
1613 1954 4.158579 CCCCTAGTTGATTTTCTTCAAGGC 59.841 45.833 0.00 0.00 36.34 4.35
1669 2019 4.261801 CCTACGGACAATTCCAACATCTT 58.738 43.478 0.00 0.00 43.00 2.40
1671 2021 3.374058 CACCTACGGACAATTCCAACATC 59.626 47.826 0.00 0.00 43.00 3.06
1675 2025 3.773418 TTCACCTACGGACAATTCCAA 57.227 42.857 0.00 0.00 43.00 3.53
1677 2027 5.296035 CCTATTTTCACCTACGGACAATTCC 59.704 44.000 0.00 0.00 38.77 3.01
1679 2029 4.638865 GCCTATTTTCACCTACGGACAATT 59.361 41.667 0.00 0.00 0.00 2.32
1680 2030 4.080526 AGCCTATTTTCACCTACGGACAAT 60.081 41.667 0.00 0.00 0.00 2.71
1684 2034 3.371965 AGAGCCTATTTTCACCTACGGA 58.628 45.455 0.00 0.00 0.00 4.69
1759 2117 5.359576 CCCCTTGTAGCTTATTTGCATACAA 59.640 40.000 0.00 6.63 36.35 2.41
1790 2148 1.378531 GGTATCGCCAATGTCAAGCA 58.621 50.000 0.00 0.00 37.17 3.91
1803 2161 5.483685 TTATGATTTCAGGGAGGGTATCG 57.516 43.478 0.00 0.00 0.00 2.92
1821 2179 3.380004 TCTGGCCCAGCGTAAAAATTATG 59.620 43.478 5.66 0.00 0.00 1.90
1848 2206 1.003580 GCTGGGATGTGACCTTCAAGA 59.996 52.381 0.00 0.00 0.00 3.02
1872 2230 1.359459 GCCGTGAAGCGTTTCCTAGG 61.359 60.000 9.65 0.82 39.32 3.02
1878 2236 2.392613 CTTGCAGCCGTGAAGCGTTT 62.393 55.000 0.00 0.00 39.32 3.60
1888 2246 2.679837 ACAAATCTATCACTTGCAGCCG 59.320 45.455 0.00 0.00 0.00 5.52
1893 2251 8.256611 TGTTAGAAGACAAATCTATCACTTGC 57.743 34.615 0.00 0.00 33.57 4.01
1908 2266 5.287226 TCTCCAACGAAACTGTTAGAAGAC 58.713 41.667 0.00 0.00 0.00 3.01
1911 2269 7.255001 GGAATTTCTCCAACGAAACTGTTAGAA 60.255 37.037 0.00 0.00 44.67 2.10
1944 2302 6.592607 TGTTCATAAGGTTTAGTAGCTTTCCG 59.407 38.462 0.00 0.00 41.68 4.30
1964 2322 9.013229 GCATATTATATCCAAGGTTCATGTTCA 57.987 33.333 0.00 0.00 0.00 3.18
1966 2324 9.592196 AAGCATATTATATCCAAGGTTCATGTT 57.408 29.630 0.00 0.00 0.00 2.71
1969 2327 9.812347 TTCAAGCATATTATATCCAAGGTTCAT 57.188 29.630 0.00 0.00 0.00 2.57
2054 2412 7.276658 GCTGATTACTATCTAATGTTAGCGCAT 59.723 37.037 11.47 0.00 0.00 4.73
2056 2414 6.809196 AGCTGATTACTATCTAATGTTAGCGC 59.191 38.462 0.00 0.00 0.00 5.92
2057 2415 7.201393 GCAGCTGATTACTATCTAATGTTAGCG 60.201 40.741 20.43 0.00 0.00 4.26
2061 2419 7.443575 CCTTGCAGCTGATTACTATCTAATGTT 59.556 37.037 20.43 0.00 0.00 2.71
2062 2420 6.933521 CCTTGCAGCTGATTACTATCTAATGT 59.066 38.462 20.43 0.00 0.00 2.71
2072 2430 1.020437 GGCTCCTTGCAGCTGATTAC 58.980 55.000 20.43 0.00 45.15 1.89
2111 2469 5.069501 ACGTCTGAGTTTAGTGGATAACC 57.930 43.478 0.00 0.00 0.00 2.85
2115 2473 5.008331 TGTAGACGTCTGAGTTTAGTGGAT 58.992 41.667 28.12 0.00 0.00 3.41
2122 2480 3.306088 CCCATGTGTAGACGTCTGAGTTT 60.306 47.826 28.12 7.29 0.00 2.66
2127 2485 1.404181 CCACCCATGTGTAGACGTCTG 60.404 57.143 28.12 10.71 41.09 3.51
2129 2487 0.892755 TCCACCCATGTGTAGACGTC 59.107 55.000 7.70 7.70 41.09 4.34
2140 2498 2.436417 CGACAGATTGTTTCCACCCAT 58.564 47.619 0.00 0.00 0.00 4.00
2143 2501 1.165270 CCCGACAGATTGTTTCCACC 58.835 55.000 0.00 0.00 0.00 4.61
2225 2583 5.733620 TCCTTCGACTGTACCAGTTAAAT 57.266 39.130 0.00 0.00 45.44 1.40
2239 2597 2.101082 GACTCCCTAACCATCCTTCGAC 59.899 54.545 0.00 0.00 0.00 4.20
2241 2599 2.362717 GAGACTCCCTAACCATCCTTCG 59.637 54.545 0.00 0.00 0.00 3.79
2499 2857 2.872245 CGAGAGTCTGCTAGAAGAGAGG 59.128 54.545 0.00 0.00 0.00 3.69
2595 2953 2.678336 GCCTAAAGAGGTTGGAATGACG 59.322 50.000 0.00 0.00 45.78 4.35
2632 2990 6.326323 TCATTATAGGACAGGTTGAGCATGTA 59.674 38.462 0.00 0.00 42.70 2.29
2721 3079 4.835615 AGTGCTCCTTGGAGACGATTATAT 59.164 41.667 19.85 0.00 0.00 0.86
2772 3130 2.797792 GCCATCAAGTGAAACGTTTGCA 60.798 45.455 20.10 13.07 45.86 4.08
2871 3229 4.056740 TCAACACCGTAAGCAAACGATAA 58.943 39.130 11.88 0.00 45.68 1.75
2881 3239 6.494842 CAATTATTGGGATCAACACCGTAAG 58.505 40.000 0.00 0.00 35.48 2.34
2967 3325 6.152379 CCTAAGAGAAGGCAACAATGAAAAC 58.848 40.000 0.00 0.00 41.41 2.43
3201 3559 2.878406 AGGAACAATGTTTCTGTGACGG 59.122 45.455 6.05 0.00 0.00 4.79
3300 3658 4.218200 TGATGCAACCAAGTATCCAAGTTG 59.782 41.667 0.00 0.00 40.55 3.16
3309 3667 3.010027 TCCCTTGATGATGCAACCAAGTA 59.990 43.478 14.98 5.24 35.50 2.24
3344 3702 4.970662 TGAGCTAAGCTTAAATGCCTTG 57.029 40.909 7.74 0.00 39.88 3.61
3355 3713 6.457528 GCGATGTTTATTCTTTGAGCTAAGCT 60.458 38.462 0.00 0.00 43.88 3.74
3383 3741 5.439721 AGTCCAATGCATCAGCTATGTTAA 58.560 37.500 0.00 0.00 42.74 2.01
3409 3767 2.569059 CCTCCAAGTATCATGGTGCAG 58.431 52.381 0.00 0.00 39.09 4.41
3537 3895 2.299297 ACTTGAATCTCCGACCGTTCTT 59.701 45.455 0.00 0.00 0.00 2.52
3543 3901 4.672801 GCAATTGAACTTGAATCTCCGACC 60.673 45.833 10.34 0.00 0.00 4.79
3662 4022 6.600822 CAGAGACCAAATCAATAACCACATCT 59.399 38.462 0.00 0.00 0.00 2.90
3744 4104 4.279671 AGCATCTCCAAGAGTACTATTCCG 59.720 45.833 0.00 0.00 0.00 4.30
3816 4176 5.766150 AATTCGTTTCCACAAATCTGACA 57.234 34.783 0.00 0.00 0.00 3.58
3851 4211 8.686334 GCAGACAGGAATCCAGAAAATTTAATA 58.314 33.333 0.61 0.00 0.00 0.98
3898 4258 1.630369 TCCTGCTGCTACTTGGTTGAT 59.370 47.619 0.00 0.00 0.00 2.57
3920 4280 3.161067 TGAAAGATTGCCGGATTTTCCA 58.839 40.909 5.05 0.00 35.91 3.53
3930 4290 5.649831 AGATAACAAGGACTGAAAGATTGCC 59.350 40.000 0.00 0.00 37.43 4.52
3931 4291 6.749923 AGATAACAAGGACTGAAAGATTGC 57.250 37.500 0.00 0.00 37.43 3.56
3933 4293 7.449704 AGCAAAGATAACAAGGACTGAAAGATT 59.550 33.333 0.00 0.00 37.43 2.40
3969 4329 2.812011 GGATTGGCGTGTACAAAGAAGT 59.188 45.455 0.00 0.00 0.00 3.01
4014 4374 2.683362 GTGCATTTGGGTAGCTACTTCC 59.317 50.000 22.74 16.57 0.00 3.46
4045 4405 2.032071 CCCTCCCGTGTTCACCAC 59.968 66.667 0.00 0.00 40.89 4.16
4114 4571 4.263506 CCCTCCTTTTCTTCTTTAGCTCCA 60.264 45.833 0.00 0.00 0.00 3.86
4137 4595 9.556030 GTAATTTTACAACAGACTCTAATTGCC 57.444 33.333 0.00 0.00 33.88 4.52
4182 4675 8.996271 GCTGGGGTATAAAGTGTATTACATTAC 58.004 37.037 0.00 0.00 0.00 1.89
4183 4676 8.940982 AGCTGGGGTATAAAGTGTATTACATTA 58.059 33.333 0.00 0.00 0.00 1.90
4184 4677 7.812306 AGCTGGGGTATAAAGTGTATTACATT 58.188 34.615 0.00 0.00 0.00 2.71
4185 4678 7.388638 AGCTGGGGTATAAAGTGTATTACAT 57.611 36.000 0.00 0.00 0.00 2.29
4277 4770 5.574970 ATTTGGTTTTTCCCATGGCTTTA 57.425 34.783 6.09 0.00 33.60 1.85
4325 4822 9.308000 CCTATAATAGATTATAGCAGCTAGGCT 57.692 37.037 18.18 3.79 45.45 4.58
4330 4827 9.667607 ACATCCCTATAATAGATTATAGCAGCT 57.332 33.333 18.18 0.00 45.45 4.24
4343 4840 3.615592 GCGCAACCGACATCCCTATAATA 60.616 47.826 0.30 0.00 36.29 0.98
4344 4841 2.870435 GCGCAACCGACATCCCTATAAT 60.870 50.000 0.30 0.00 36.29 1.28
4345 4842 1.539496 GCGCAACCGACATCCCTATAA 60.539 52.381 0.30 0.00 36.29 0.98
4379 4888 0.460811 CACATCGCTTGCCTGCTAGA 60.461 55.000 4.77 0.00 0.00 2.43
4613 6148 0.889186 ATGTGTCCTTTGACGGGTGC 60.889 55.000 0.00 0.00 44.86 5.01
4628 6163 3.453424 CCATGGCATGATGTCAAATGTG 58.547 45.455 28.43 0.00 34.67 3.21
4659 6194 2.448542 CCTCCCGTCCCCATGGAT 60.449 66.667 15.22 0.00 44.28 3.41
4692 6233 2.224305 ACAGGGCAGTAGACAGTTCAAC 60.224 50.000 0.00 0.00 0.00 3.18
4694 6235 1.618837 GACAGGGCAGTAGACAGTTCA 59.381 52.381 0.00 0.00 0.00 3.18
4873 6498 6.308041 GCAAACGATTCTTAACTTTTCATCCC 59.692 38.462 0.00 0.00 0.00 3.85
4876 6501 6.156519 GGGCAAACGATTCTTAACTTTTCAT 58.843 36.000 0.00 0.00 0.00 2.57
4877 6502 5.067936 TGGGCAAACGATTCTTAACTTTTCA 59.932 36.000 0.00 0.00 0.00 2.69
4892 6517 4.237349 ACATAAAGAAAGTGGGCAAACG 57.763 40.909 0.00 0.00 0.00 3.60
4914 6539 8.426489 TCGTTTGCCCAGTTTAATATAGATAGT 58.574 33.333 0.00 0.00 0.00 2.12
4915 6540 8.827177 TCGTTTGCCCAGTTTAATATAGATAG 57.173 34.615 0.00 0.00 0.00 2.08
4916 6541 9.787435 AATCGTTTGCCCAGTTTAATATAGATA 57.213 29.630 0.00 0.00 0.00 1.98
4917 6542 8.691661 AATCGTTTGCCCAGTTTAATATAGAT 57.308 30.769 0.00 0.00 0.00 1.98
4918 6543 7.990886 AGAATCGTTTGCCCAGTTTAATATAGA 59.009 33.333 0.00 0.00 0.00 1.98
4919 6544 8.154649 AGAATCGTTTGCCCAGTTTAATATAG 57.845 34.615 0.00 0.00 0.00 1.31
4921 6546 7.404671 AAGAATCGTTTGCCCAGTTTAATAT 57.595 32.000 0.00 0.00 0.00 1.28
4922 6547 6.827586 AAGAATCGTTTGCCCAGTTTAATA 57.172 33.333 0.00 0.00 0.00 0.98
4923 6548 5.722021 AAGAATCGTTTGCCCAGTTTAAT 57.278 34.783 0.00 0.00 0.00 1.40
4924 6549 6.263617 AGTTAAGAATCGTTTGCCCAGTTTAA 59.736 34.615 0.00 0.00 0.00 1.52
4925 6550 5.766174 AGTTAAGAATCGTTTGCCCAGTTTA 59.234 36.000 0.00 0.00 0.00 2.01
4928 6553 3.751518 AGTTAAGAATCGTTTGCCCAGT 58.248 40.909 0.00 0.00 0.00 4.00
4929 6554 4.766404 AAGTTAAGAATCGTTTGCCCAG 57.234 40.909 0.00 0.00 0.00 4.45
4930 6555 4.022676 GGAAAGTTAAGAATCGTTTGCCCA 60.023 41.667 0.00 0.00 0.00 5.36
4931 6556 4.022676 TGGAAAGTTAAGAATCGTTTGCCC 60.023 41.667 0.00 0.00 0.00 5.36
4932 6557 5.116069 TGGAAAGTTAAGAATCGTTTGCC 57.884 39.130 0.00 0.00 0.00 4.52
4933 6558 6.675515 CTTGGAAAGTTAAGAATCGTTTGC 57.324 37.500 0.00 0.00 39.70 3.68
4950 6575 9.420118 ACATATTATTATTTCCTGCACTTGGAA 57.580 29.630 1.89 1.89 41.33 3.53
4951 6576 8.995027 ACATATTATTATTTCCTGCACTTGGA 57.005 30.769 0.00 0.00 0.00 3.53
5051 6684 9.686683 AACTAGTTAGGTTTATTCAGATTGCAT 57.313 29.630 6.26 0.00 0.00 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.