Multiple sequence alignment - TraesCS2B01G499000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G499000 chr2B 100.000 2261 0 0 1 2261 695365674 695367934 0.000000e+00 4176
1 TraesCS2B01G499000 chr1A 90.571 1209 82 10 774 1981 331775876 331774699 0.000000e+00 1572
2 TraesCS2B01G499000 chr1A 91.979 187 14 1 511 696 256754341 256754155 6.190000e-66 261
3 TraesCS2B01G499000 chr3D 89.075 1254 109 10 735 1988 583018781 583017556 0.000000e+00 1531
4 TraesCS2B01G499000 chr3D 93.625 502 29 3 1 499 88123425 88123926 0.000000e+00 747
5 TraesCS2B01G499000 chr3D 93.186 499 30 4 1 496 75537442 75536945 0.000000e+00 730
6 TraesCS2B01G499000 chr3D 92.629 502 34 3 1 499 306878236 306878737 0.000000e+00 719
7 TraesCS2B01G499000 chr3D 91.979 187 14 1 511 696 173951001 173951187 6.190000e-66 261
8 TraesCS2B01G499000 chr3D 91.979 187 14 1 511 696 480352303 480352117 6.190000e-66 261
9 TraesCS2B01G499000 chr6D 82.359 1026 168 9 777 1800 384357869 384358883 0.000000e+00 880
10 TraesCS2B01G499000 chr6D 92.629 502 34 3 1 499 251112240 251112741 0.000000e+00 719
11 TraesCS2B01G499000 chr4D 82.278 1027 167 11 776 1800 15057325 15058338 0.000000e+00 874
12 TraesCS2B01G499000 chr4D 93.028 502 31 4 1 499 37011209 37010709 0.000000e+00 730
13 TraesCS2B01G499000 chr4D 92.944 496 32 3 1 493 62058272 62058767 0.000000e+00 719
14 TraesCS2B01G499000 chr4D 94.382 178 9 1 520 696 243585990 243585813 2.860000e-69 272
15 TraesCS2B01G499000 chr7D 92.829 502 33 3 1 499 324139489 324138988 0.000000e+00 725
16 TraesCS2B01G499000 chr7D 92.829 502 33 3 1 499 475554851 475554350 0.000000e+00 725
17 TraesCS2B01G499000 chr7D 77.998 1009 208 10 792 1797 204005447 204004450 2.470000e-174 621
18 TraesCS2B01G499000 chr3B 92.800 500 33 3 3 499 83539448 83539947 0.000000e+00 721
19 TraesCS2B01G499000 chr6A 78.894 995 195 13 806 1797 60033896 60034878 0.000000e+00 660
20 TraesCS2B01G499000 chr2D 83.721 430 67 3 787 1215 432761400 432761827 9.730000e-109 403
21 TraesCS2B01G499000 chr2D 93.583 187 11 1 511 696 445245439 445245253 6.150000e-71 278
22 TraesCS2B01G499000 chr5D 94.857 175 9 0 511 685 244316460 244316286 7.960000e-70 274
23 TraesCS2B01G499000 chr1D 92.973 185 12 1 513 696 388911458 388911274 3.700000e-68 268
24 TraesCS2B01G499000 chr1D 92.513 187 13 1 511 696 119186626 119186440 1.330000e-67 267
25 TraesCS2B01G499000 chrUn 92.513 187 13 1 511 696 344396393 344396579 1.330000e-67 267
26 TraesCS2B01G499000 chr7A 85.083 181 26 1 806 986 6783918 6783739 1.380000e-42 183


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G499000 chr2B 695365674 695367934 2260 False 4176 4176 100.000 1 2261 1 chr2B.!!$F1 2260
1 TraesCS2B01G499000 chr1A 331774699 331775876 1177 True 1572 1572 90.571 774 1981 1 chr1A.!!$R2 1207
2 TraesCS2B01G499000 chr3D 583017556 583018781 1225 True 1531 1531 89.075 735 1988 1 chr3D.!!$R3 1253
3 TraesCS2B01G499000 chr3D 88123425 88123926 501 False 747 747 93.625 1 499 1 chr3D.!!$F1 498
4 TraesCS2B01G499000 chr3D 306878236 306878737 501 False 719 719 92.629 1 499 1 chr3D.!!$F3 498
5 TraesCS2B01G499000 chr6D 384357869 384358883 1014 False 880 880 82.359 777 1800 1 chr6D.!!$F2 1023
6 TraesCS2B01G499000 chr6D 251112240 251112741 501 False 719 719 92.629 1 499 1 chr6D.!!$F1 498
7 TraesCS2B01G499000 chr4D 15057325 15058338 1013 False 874 874 82.278 776 1800 1 chr4D.!!$F1 1024
8 TraesCS2B01G499000 chr4D 37010709 37011209 500 True 730 730 93.028 1 499 1 chr4D.!!$R1 498
9 TraesCS2B01G499000 chr7D 324138988 324139489 501 True 725 725 92.829 1 499 1 chr7D.!!$R2 498
10 TraesCS2B01G499000 chr7D 475554350 475554851 501 True 725 725 92.829 1 499 1 chr7D.!!$R3 498
11 TraesCS2B01G499000 chr7D 204004450 204005447 997 True 621 621 77.998 792 1797 1 chr7D.!!$R1 1005
12 TraesCS2B01G499000 chr6A 60033896 60034878 982 False 660 660 78.894 806 1797 1 chr6A.!!$F1 991

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
592 596 0.10412 CGACCGGCCTGTAATCATCA 59.896 55.0 0.0 0.0 0.0 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2181 2187 0.033796 ATCCACCCTGATGTTGCTGG 60.034 55.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 89 1.294041 TGTATTGGCCCTGGATGTCA 58.706 50.000 0.00 0.00 0.00 3.58
104 106 2.158623 TGTCAACAAGATTCTGGCAGGT 60.159 45.455 15.73 3.62 0.00 4.00
109 111 2.306805 ACAAGATTCTGGCAGGTGATGA 59.693 45.455 15.73 0.00 0.00 2.92
205 207 1.080298 GCAAAATGCTCGCAAGGCT 60.080 52.632 0.00 0.00 40.96 4.58
222 224 2.420058 GCTTTGTGGCCAGGTAGTAT 57.580 50.000 5.11 0.00 0.00 2.12
344 347 1.629043 TGTACTTCTCCTCGGCAAGT 58.371 50.000 0.00 5.72 34.68 3.16
386 389 4.954118 TGCTCCACCCAGACCGGT 62.954 66.667 6.92 6.92 36.18 5.28
401 404 1.065272 ACCGGTTTGTTGGTGTACACT 60.065 47.619 24.55 0.00 37.02 3.55
410 413 1.171308 TGGTGTACACTACCGAGAGC 58.829 55.000 24.55 6.10 41.18 4.09
447 451 3.737172 GTCCACCACGGCATGCAC 61.737 66.667 21.36 8.08 33.14 4.57
503 507 2.044451 CCATTGGGGCCGCTGTAA 60.044 61.111 21.80 7.47 0.00 2.41
504 508 1.455587 CCATTGGGGCCGCTGTAAT 60.456 57.895 21.80 9.63 0.00 1.89
505 509 0.179004 CCATTGGGGCCGCTGTAATA 60.179 55.000 21.80 0.00 0.00 0.98
506 510 1.686355 CATTGGGGCCGCTGTAATAA 58.314 50.000 21.80 5.89 0.00 1.40
507 511 2.028130 CATTGGGGCCGCTGTAATAAA 58.972 47.619 21.80 5.11 0.00 1.40
508 512 2.445682 TTGGGGCCGCTGTAATAAAT 57.554 45.000 21.80 0.00 0.00 1.40
509 513 1.975660 TGGGGCCGCTGTAATAAATC 58.024 50.000 21.80 0.00 0.00 2.17
510 514 1.493022 TGGGGCCGCTGTAATAAATCT 59.507 47.619 21.80 0.00 0.00 2.40
511 515 1.880027 GGGGCCGCTGTAATAAATCTG 59.120 52.381 13.57 0.00 0.00 2.90
512 516 1.880027 GGGCCGCTGTAATAAATCTGG 59.120 52.381 0.00 0.00 0.00 3.86
513 517 1.880027 GGCCGCTGTAATAAATCTGGG 59.120 52.381 0.00 0.00 0.00 4.45
514 518 1.880027 GCCGCTGTAATAAATCTGGGG 59.120 52.381 0.00 0.00 38.15 4.96
515 519 1.880027 CCGCTGTAATAAATCTGGGGC 59.120 52.381 0.00 0.00 0.00 5.80
516 520 2.571212 CGCTGTAATAAATCTGGGGCA 58.429 47.619 0.00 0.00 0.00 5.36
517 521 3.149196 CGCTGTAATAAATCTGGGGCAT 58.851 45.455 0.00 0.00 0.00 4.40
518 522 3.058016 CGCTGTAATAAATCTGGGGCATG 60.058 47.826 0.00 0.00 0.00 4.06
519 523 4.144297 GCTGTAATAAATCTGGGGCATGA 58.856 43.478 0.00 0.00 0.00 3.07
520 524 4.768968 GCTGTAATAAATCTGGGGCATGAT 59.231 41.667 0.00 0.00 0.00 2.45
521 525 5.105997 GCTGTAATAAATCTGGGGCATGATC 60.106 44.000 0.00 0.00 0.00 2.92
522 526 5.951204 TGTAATAAATCTGGGGCATGATCA 58.049 37.500 0.00 0.00 0.00 2.92
523 527 6.372104 TGTAATAAATCTGGGGCATGATCAA 58.628 36.000 0.00 0.00 0.00 2.57
524 528 6.838090 TGTAATAAATCTGGGGCATGATCAAA 59.162 34.615 0.00 0.00 0.00 2.69
525 529 6.811634 AATAAATCTGGGGCATGATCAAAA 57.188 33.333 0.00 0.00 0.00 2.44
526 530 4.748277 AAATCTGGGGCATGATCAAAAG 57.252 40.909 0.00 0.00 0.00 2.27
527 531 2.148446 TCTGGGGCATGATCAAAAGG 57.852 50.000 0.00 0.00 0.00 3.11
528 532 1.358787 TCTGGGGCATGATCAAAAGGT 59.641 47.619 0.00 0.00 0.00 3.50
529 533 2.181975 CTGGGGCATGATCAAAAGGTT 58.818 47.619 0.00 0.00 0.00 3.50
530 534 1.901159 TGGGGCATGATCAAAAGGTTG 59.099 47.619 0.00 0.00 35.95 3.77
532 536 2.566724 GGGGCATGATCAAAAGGTTGAA 59.433 45.455 0.00 0.00 46.66 2.69
533 537 3.368739 GGGGCATGATCAAAAGGTTGAAG 60.369 47.826 0.00 0.00 46.66 3.02
534 538 3.511146 GGGCATGATCAAAAGGTTGAAGA 59.489 43.478 0.00 0.00 46.66 2.87
535 539 4.381292 GGGCATGATCAAAAGGTTGAAGAG 60.381 45.833 0.00 0.00 46.66 2.85
536 540 4.460382 GGCATGATCAAAAGGTTGAAGAGA 59.540 41.667 0.00 0.00 46.66 3.10
537 541 5.397326 GCATGATCAAAAGGTTGAAGAGAC 58.603 41.667 0.00 0.00 46.66 3.36
538 542 5.048504 GCATGATCAAAAGGTTGAAGAGACA 60.049 40.000 0.00 0.00 46.66 3.41
539 543 6.376978 CATGATCAAAAGGTTGAAGAGACAC 58.623 40.000 0.00 0.00 46.66 3.67
540 544 5.436175 TGATCAAAAGGTTGAAGAGACACA 58.564 37.500 0.00 0.00 46.66 3.72
541 545 5.885352 TGATCAAAAGGTTGAAGAGACACAA 59.115 36.000 0.00 0.00 46.66 3.33
542 546 5.818136 TCAAAAGGTTGAAGAGACACAAG 57.182 39.130 0.00 0.00 40.87 3.16
543 547 4.640201 TCAAAAGGTTGAAGAGACACAAGG 59.360 41.667 0.00 0.00 40.87 3.61
544 548 2.938956 AGGTTGAAGAGACACAAGGG 57.061 50.000 0.00 0.00 0.00 3.95
545 549 2.127708 AGGTTGAAGAGACACAAGGGT 58.872 47.619 0.00 0.00 0.00 4.34
546 550 2.509964 AGGTTGAAGAGACACAAGGGTT 59.490 45.455 0.00 0.00 0.00 4.11
547 551 3.714798 AGGTTGAAGAGACACAAGGGTTA 59.285 43.478 0.00 0.00 0.00 2.85
548 552 4.165372 AGGTTGAAGAGACACAAGGGTTAA 59.835 41.667 0.00 0.00 0.00 2.01
549 553 4.885325 GGTTGAAGAGACACAAGGGTTAAA 59.115 41.667 0.00 0.00 0.00 1.52
550 554 5.535030 GGTTGAAGAGACACAAGGGTTAAAT 59.465 40.000 0.00 0.00 0.00 1.40
551 555 6.438763 GTTGAAGAGACACAAGGGTTAAATG 58.561 40.000 0.00 0.00 0.00 2.32
552 556 5.070001 TGAAGAGACACAAGGGTTAAATGG 58.930 41.667 0.00 0.00 0.00 3.16
553 557 3.421844 AGAGACACAAGGGTTAAATGGC 58.578 45.455 0.00 0.00 0.00 4.40
554 558 2.492088 GAGACACAAGGGTTAAATGGCC 59.508 50.000 0.00 0.00 0.00 5.36
555 559 1.201414 GACACAAGGGTTAAATGGCCG 59.799 52.381 0.00 0.00 0.00 6.13
556 560 0.108851 CACAAGGGTTAAATGGCCGC 60.109 55.000 0.00 0.00 0.00 6.53
557 561 0.251608 ACAAGGGTTAAATGGCCGCT 60.252 50.000 0.00 0.00 0.00 5.52
558 562 0.173255 CAAGGGTTAAATGGCCGCTG 59.827 55.000 0.00 0.00 0.00 5.18
559 563 0.251608 AAGGGTTAAATGGCCGCTGT 60.252 50.000 0.00 0.00 0.00 4.40
560 564 0.621609 AGGGTTAAATGGCCGCTGTA 59.378 50.000 0.00 0.00 0.00 2.74
561 565 1.004979 AGGGTTAAATGGCCGCTGTAA 59.995 47.619 0.00 0.00 0.00 2.41
562 566 2.028876 GGGTTAAATGGCCGCTGTAAT 58.971 47.619 0.00 0.00 0.00 1.89
563 567 3.117813 AGGGTTAAATGGCCGCTGTAATA 60.118 43.478 0.00 0.00 0.00 0.98
564 568 3.633065 GGGTTAAATGGCCGCTGTAATAA 59.367 43.478 0.00 0.00 0.00 1.40
565 569 4.098196 GGGTTAAATGGCCGCTGTAATAAA 59.902 41.667 0.00 0.00 0.00 1.40
566 570 5.221362 GGGTTAAATGGCCGCTGTAATAAAT 60.221 40.000 0.00 0.00 0.00 1.40
567 571 5.689961 GGTTAAATGGCCGCTGTAATAAATG 59.310 40.000 0.00 0.00 0.00 2.32
568 572 4.320608 AAATGGCCGCTGTAATAAATGG 57.679 40.909 0.00 0.00 0.00 3.16
569 573 1.686355 TGGCCGCTGTAATAAATGGG 58.314 50.000 0.00 0.00 0.00 4.00
570 574 0.958822 GGCCGCTGTAATAAATGGGG 59.041 55.000 0.00 0.00 35.90 4.96
571 575 0.958822 GCCGCTGTAATAAATGGGGG 59.041 55.000 0.00 0.00 33.80 5.40
572 576 0.958822 CCGCTGTAATAAATGGGGGC 59.041 55.000 0.00 0.00 0.00 5.80
573 577 0.958822 CGCTGTAATAAATGGGGGCC 59.041 55.000 0.00 0.00 0.00 5.80
574 578 0.958822 GCTGTAATAAATGGGGGCCG 59.041 55.000 0.00 0.00 0.00 6.13
575 579 1.477923 GCTGTAATAAATGGGGGCCGA 60.478 52.381 0.00 0.00 0.00 5.54
576 580 2.227194 CTGTAATAAATGGGGGCCGAC 58.773 52.381 0.00 0.00 0.00 4.79
577 581 1.133730 TGTAATAAATGGGGGCCGACC 60.134 52.381 8.11 8.11 39.11 4.79
578 582 0.108963 TAATAAATGGGGGCCGACCG 59.891 55.000 10.20 0.00 41.60 4.79
579 583 2.634193 AATAAATGGGGGCCGACCGG 62.634 60.000 0.00 0.00 41.60 5.28
589 593 2.897207 CCGACCGGCCTGTAATCA 59.103 61.111 0.00 0.00 0.00 2.57
590 594 1.445942 CCGACCGGCCTGTAATCAT 59.554 57.895 0.00 0.00 0.00 2.45
591 595 0.600255 CCGACCGGCCTGTAATCATC 60.600 60.000 0.00 0.00 0.00 2.92
592 596 0.104120 CGACCGGCCTGTAATCATCA 59.896 55.000 0.00 0.00 0.00 3.07
593 597 1.583054 GACCGGCCTGTAATCATCAC 58.417 55.000 0.00 0.00 0.00 3.06
594 598 0.179084 ACCGGCCTGTAATCATCACG 60.179 55.000 0.00 0.00 0.00 4.35
595 599 0.179084 CCGGCCTGTAATCATCACGT 60.179 55.000 0.00 0.00 0.00 4.49
596 600 1.067974 CCGGCCTGTAATCATCACGTA 59.932 52.381 0.00 0.00 0.00 3.57
597 601 2.288825 CCGGCCTGTAATCATCACGTAT 60.289 50.000 0.00 0.00 0.00 3.06
598 602 3.390135 CGGCCTGTAATCATCACGTATT 58.610 45.455 0.00 0.00 0.00 1.89
599 603 3.184379 CGGCCTGTAATCATCACGTATTG 59.816 47.826 0.00 0.00 0.00 1.90
600 604 4.127171 GGCCTGTAATCATCACGTATTGT 58.873 43.478 0.00 0.00 0.00 2.71
601 605 4.211374 GGCCTGTAATCATCACGTATTGTC 59.789 45.833 0.00 0.00 0.00 3.18
602 606 4.808895 GCCTGTAATCATCACGTATTGTCA 59.191 41.667 0.00 0.00 0.00 3.58
603 607 5.050769 GCCTGTAATCATCACGTATTGTCAG 60.051 44.000 0.00 0.00 0.00 3.51
604 608 5.463392 CCTGTAATCATCACGTATTGTCAGG 59.537 44.000 14.45 14.45 34.96 3.86
605 609 6.215495 TGTAATCATCACGTATTGTCAGGA 57.785 37.500 0.00 0.00 0.00 3.86
606 610 6.040247 TGTAATCATCACGTATTGTCAGGAC 58.960 40.000 0.00 0.00 0.00 3.85
607 611 3.145212 TCATCACGTATTGTCAGGACG 57.855 47.619 6.96 6.96 42.22 4.79
615 619 3.486108 CGTATTGTCAGGACGTTCATAGC 59.514 47.826 0.00 0.00 0.00 2.97
616 620 1.990799 TTGTCAGGACGTTCATAGCG 58.009 50.000 0.00 0.00 0.00 4.26
617 621 0.172578 TGTCAGGACGTTCATAGCGG 59.827 55.000 0.00 0.00 0.00 5.52
618 622 0.454600 GTCAGGACGTTCATAGCGGA 59.545 55.000 0.00 0.00 0.00 5.54
619 623 0.738975 TCAGGACGTTCATAGCGGAG 59.261 55.000 0.00 0.00 0.00 4.63
620 624 0.249073 CAGGACGTTCATAGCGGAGG 60.249 60.000 0.00 0.00 0.00 4.30
621 625 0.395311 AGGACGTTCATAGCGGAGGA 60.395 55.000 0.00 0.00 0.00 3.71
622 626 0.674534 GGACGTTCATAGCGGAGGAT 59.325 55.000 0.00 0.00 0.00 3.24
623 627 1.068741 GGACGTTCATAGCGGAGGATT 59.931 52.381 0.00 0.00 0.00 3.01
624 628 2.395654 GACGTTCATAGCGGAGGATTC 58.604 52.381 0.00 0.00 0.00 2.52
625 629 1.068741 ACGTTCATAGCGGAGGATTCC 59.931 52.381 0.00 0.00 40.33 3.01
626 630 1.068588 CGTTCATAGCGGAGGATTCCA 59.931 52.381 5.29 0.00 44.26 3.53
627 631 2.760374 GTTCATAGCGGAGGATTCCAG 58.240 52.381 5.29 0.00 44.26 3.86
628 632 2.088104 TCATAGCGGAGGATTCCAGT 57.912 50.000 5.29 0.00 44.26 4.00
629 633 1.688735 TCATAGCGGAGGATTCCAGTG 59.311 52.381 5.29 0.00 44.26 3.66
630 634 0.394565 ATAGCGGAGGATTCCAGTGC 59.605 55.000 5.29 5.28 44.26 4.40
631 635 0.975556 TAGCGGAGGATTCCAGTGCA 60.976 55.000 5.29 0.00 44.26 4.57
632 636 2.109126 GCGGAGGATTCCAGTGCAC 61.109 63.158 9.40 9.40 44.26 4.57
633 637 1.811266 CGGAGGATTCCAGTGCACG 60.811 63.158 12.01 6.45 44.26 5.34
634 638 2.109126 GGAGGATTCCAGTGCACGC 61.109 63.158 12.01 0.00 43.45 5.34
635 639 1.078848 GAGGATTCCAGTGCACGCT 60.079 57.895 12.01 0.00 0.00 5.07
636 640 0.674895 GAGGATTCCAGTGCACGCTT 60.675 55.000 12.01 0.00 0.00 4.68
637 641 0.957395 AGGATTCCAGTGCACGCTTG 60.957 55.000 12.01 4.23 0.00 4.01
638 642 0.955428 GGATTCCAGTGCACGCTTGA 60.955 55.000 12.01 3.88 0.00 3.02
639 643 0.166814 GATTCCAGTGCACGCTTGAC 59.833 55.000 12.01 0.00 0.00 3.18
640 644 0.534877 ATTCCAGTGCACGCTTGACA 60.535 50.000 12.01 0.00 0.00 3.58
641 645 0.746204 TTCCAGTGCACGCTTGACAA 60.746 50.000 12.01 0.00 0.00 3.18
642 646 1.009675 CCAGTGCACGCTTGACAAC 60.010 57.895 12.01 0.00 0.00 3.32
643 647 1.713937 CCAGTGCACGCTTGACAACA 61.714 55.000 12.01 0.00 0.00 3.33
644 648 0.589729 CAGTGCACGCTTGACAACAC 60.590 55.000 12.01 0.00 0.00 3.32
645 649 1.298339 GTGCACGCTTGACAACACC 60.298 57.895 0.00 0.00 0.00 4.16
646 650 2.052237 GCACGCTTGACAACACCG 60.052 61.111 0.00 0.00 0.00 4.94
647 651 2.052237 CACGCTTGACAACACCGC 60.052 61.111 0.00 0.00 0.00 5.68
648 652 2.512745 ACGCTTGACAACACCGCA 60.513 55.556 0.00 0.00 0.00 5.69
649 653 2.052237 CGCTTGACAACACCGCAC 60.052 61.111 0.00 0.00 0.00 5.34
650 654 2.331451 GCTTGACAACACCGCACC 59.669 61.111 0.00 0.00 0.00 5.01
651 655 2.631428 CTTGACAACACCGCACCG 59.369 61.111 0.00 0.00 0.00 4.94
652 656 3.521308 CTTGACAACACCGCACCGC 62.521 63.158 0.00 0.00 0.00 5.68
653 657 4.840005 TGACAACACCGCACCGCA 62.840 61.111 0.00 0.00 0.00 5.69
654 658 4.307908 GACAACACCGCACCGCAC 62.308 66.667 0.00 0.00 0.00 5.34
661 665 4.244802 CCGCACCGCACGTGTTTT 62.245 61.111 18.38 0.00 44.97 2.43
662 666 3.016203 CGCACCGCACGTGTTTTG 61.016 61.111 18.38 12.18 44.97 2.44
663 667 2.101380 GCACCGCACGTGTTTTGT 59.899 55.556 18.38 6.50 44.97 2.83
664 668 1.515304 GCACCGCACGTGTTTTGTT 60.515 52.632 18.38 0.00 44.97 2.83
665 669 1.073768 GCACCGCACGTGTTTTGTTT 61.074 50.000 18.38 0.00 44.97 2.83
666 670 0.637738 CACCGCACGTGTTTTGTTTG 59.362 50.000 18.38 1.55 37.73 2.93
667 671 0.522180 ACCGCACGTGTTTTGTTTGA 59.478 45.000 18.38 0.00 0.00 2.69
668 672 0.911184 CCGCACGTGTTTTGTTTGAC 59.089 50.000 18.38 0.00 0.00 3.18
669 673 0.911184 CGCACGTGTTTTGTTTGACC 59.089 50.000 18.38 0.00 0.00 4.02
670 674 1.729472 CGCACGTGTTTTGTTTGACCA 60.729 47.619 18.38 0.00 0.00 4.02
671 675 1.651631 GCACGTGTTTTGTTTGACCAC 59.348 47.619 18.38 0.00 0.00 4.16
672 676 2.922758 GCACGTGTTTTGTTTGACCACA 60.923 45.455 18.38 0.00 0.00 4.17
673 677 2.659279 CACGTGTTTTGTTTGACCACAC 59.341 45.455 7.58 0.00 35.42 3.82
675 679 2.936316 GTGTTTTGTTTGACCACACGT 58.064 42.857 0.00 0.00 0.00 4.49
676 680 2.659279 GTGTTTTGTTTGACCACACGTG 59.341 45.455 15.48 15.48 0.00 4.49
685 689 2.738521 CCACACGTGGGCTCGAAG 60.739 66.667 21.57 0.00 46.81 3.79
686 690 2.338620 CACACGTGGGCTCGAAGA 59.661 61.111 21.57 0.00 34.70 2.87
699 703 2.363788 TCGAAGAGGGACAAATCGTG 57.636 50.000 0.00 0.00 35.20 4.35
700 704 1.890489 TCGAAGAGGGACAAATCGTGA 59.110 47.619 0.00 0.00 35.20 4.35
701 705 2.094700 TCGAAGAGGGACAAATCGTGAG 60.095 50.000 0.00 0.00 35.20 3.51
702 706 2.003301 GAAGAGGGACAAATCGTGAGC 58.997 52.381 0.00 0.00 0.00 4.26
703 707 1.270907 AGAGGGACAAATCGTGAGCT 58.729 50.000 0.00 0.00 0.00 4.09
704 708 1.625818 AGAGGGACAAATCGTGAGCTT 59.374 47.619 0.00 0.00 0.00 3.74
705 709 2.039084 AGAGGGACAAATCGTGAGCTTT 59.961 45.455 0.00 0.00 0.00 3.51
706 710 2.814336 GAGGGACAAATCGTGAGCTTTT 59.186 45.455 0.00 0.00 0.00 2.27
707 711 4.000988 GAGGGACAAATCGTGAGCTTTTA 58.999 43.478 0.00 0.00 0.00 1.52
708 712 4.589908 AGGGACAAATCGTGAGCTTTTAT 58.410 39.130 0.00 0.00 0.00 1.40
709 713 5.010282 AGGGACAAATCGTGAGCTTTTATT 58.990 37.500 0.00 0.00 0.00 1.40
710 714 5.095490 GGGACAAATCGTGAGCTTTTATTG 58.905 41.667 0.00 0.00 0.00 1.90
711 715 5.095490 GGACAAATCGTGAGCTTTTATTGG 58.905 41.667 0.00 0.00 0.00 3.16
712 716 4.485163 ACAAATCGTGAGCTTTTATTGGC 58.515 39.130 0.00 0.00 0.00 4.52
713 717 4.022416 ACAAATCGTGAGCTTTTATTGGCA 60.022 37.500 0.00 0.00 0.00 4.92
714 718 4.782019 AATCGTGAGCTTTTATTGGCAA 57.218 36.364 0.68 0.68 0.00 4.52
715 719 4.782019 ATCGTGAGCTTTTATTGGCAAA 57.218 36.364 3.01 0.00 0.00 3.68
716 720 4.576216 TCGTGAGCTTTTATTGGCAAAA 57.424 36.364 3.01 0.00 0.00 2.44
717 721 4.938080 TCGTGAGCTTTTATTGGCAAAAA 58.062 34.783 3.01 0.00 0.00 1.94
718 722 5.537188 TCGTGAGCTTTTATTGGCAAAAAT 58.463 33.333 3.01 0.00 0.00 1.82
719 723 6.682746 TCGTGAGCTTTTATTGGCAAAAATA 58.317 32.000 3.01 0.00 0.00 1.40
720 724 7.148641 TCGTGAGCTTTTATTGGCAAAAATAA 58.851 30.769 3.01 0.00 31.67 1.40
721 725 7.328249 TCGTGAGCTTTTATTGGCAAAAATAAG 59.672 33.333 3.01 7.75 34.39 1.73
722 726 7.328249 CGTGAGCTTTTATTGGCAAAAATAAGA 59.672 33.333 3.01 0.00 34.39 2.10
723 727 9.154847 GTGAGCTTTTATTGGCAAAAATAAGAT 57.845 29.630 3.01 5.39 34.39 2.40
766 770 9.304731 TGACATTTGCATTTCTTTAATAGCATC 57.695 29.630 0.00 0.00 33.43 3.91
769 773 9.188588 CATTTGCATTTCTTTAATAGCATCGAT 57.811 29.630 0.00 0.00 33.43 3.59
770 774 9.754382 ATTTGCATTTCTTTAATAGCATCGATT 57.246 25.926 0.00 0.00 33.43 3.34
822 826 6.782494 TGATCACTAGCATGAGGGACTATTTA 59.218 38.462 0.00 0.00 41.55 1.40
876 880 2.161609 CGTTTATGCCAACTGGAGGAAC 59.838 50.000 0.00 0.00 37.39 3.62
962 966 6.521162 AGGTTTTTAATTACAACAAGGCCAG 58.479 36.000 5.01 0.00 0.00 4.85
970 974 1.534717 AACAAGGCCAGGCTTGCAT 60.535 52.632 27.99 17.37 34.20 3.96
981 985 2.609459 CAGGCTTGCATAACTTACTCCG 59.391 50.000 0.00 0.00 0.00 4.63
1009 1013 5.245531 GTGGTAAAGACATCATGAGGACAA 58.754 41.667 15.42 0.00 0.00 3.18
1011 1015 6.206634 GTGGTAAAGACATCATGAGGACAAAA 59.793 38.462 15.42 0.00 0.00 2.44
1040 1044 0.777446 TGGGCTAGGGCAGTTTTTCT 59.223 50.000 0.00 0.00 40.87 2.52
1042 1046 2.026262 TGGGCTAGGGCAGTTTTTCTAG 60.026 50.000 0.00 0.00 40.87 2.43
1204 1208 2.159114 TCCAAAAGTGCAAAGTGGAAGC 60.159 45.455 7.09 0.00 35.45 3.86
1214 1218 5.006261 GTGCAAAGTGGAAGCGTAAAATTTT 59.994 36.000 8.75 8.75 0.00 1.82
1237 1241 4.041444 TCCCCAACATTTTGAGGAAATTGG 59.959 41.667 0.00 0.00 36.71 3.16
1242 1246 6.711645 CCAACATTTTGAGGAAATTGGATGTT 59.288 34.615 0.00 0.00 38.68 2.71
1317 1321 2.492088 TGAGGTAATGAGGTGAGACACG 59.508 50.000 0.00 0.00 34.83 4.49
1389 1394 4.037923 CACTTGTGGTTATTTTCAGCTGGT 59.962 41.667 15.13 0.42 0.00 4.00
1486 1491 8.709386 AGTGCTACTACATAGAAACATTCAAG 57.291 34.615 0.00 0.00 31.83 3.02
1542 1547 2.430694 GAGTGGAAAGTTGGCCTGTTTT 59.569 45.455 3.32 1.04 0.00 2.43
1589 1594 2.378038 GCTACATTGCCATTCCAGGAA 58.622 47.619 3.72 3.72 0.00 3.36
1774 1780 2.092538 CACATCTTGGCAAGAGAGGGAT 60.093 50.000 31.17 13.77 41.61 3.85
1778 1784 4.222124 TCTTGGCAAGAGAGGGATAAAC 57.778 45.455 25.38 0.00 32.71 2.01
1804 1810 5.955355 AGAGAGAAACAGAGGTACTAGCATT 59.045 40.000 0.00 0.00 41.55 3.56
1806 1812 5.128008 AGAGAAACAGAGGTACTAGCATTCC 59.872 44.000 0.00 0.00 41.55 3.01
1808 1814 2.032620 ACAGAGGTACTAGCATTCCCG 58.967 52.381 0.00 0.00 41.55 5.14
1809 1815 2.032620 CAGAGGTACTAGCATTCCCGT 58.967 52.381 0.00 0.00 41.55 5.28
1810 1816 2.431057 CAGAGGTACTAGCATTCCCGTT 59.569 50.000 0.00 0.00 41.55 4.44
1811 1817 2.431057 AGAGGTACTAGCATTCCCGTTG 59.569 50.000 0.00 0.00 41.55 4.10
1812 1818 1.134491 AGGTACTAGCATTCCCGTTGC 60.134 52.381 0.00 0.00 36.02 4.17
1817 1823 3.987404 GCATTCCCGTTGCTCTGT 58.013 55.556 0.00 0.00 37.14 3.41
1818 1824 2.257353 GCATTCCCGTTGCTCTGTT 58.743 52.632 0.00 0.00 37.14 3.16
1819 1825 0.598065 GCATTCCCGTTGCTCTGTTT 59.402 50.000 0.00 0.00 37.14 2.83
1820 1826 1.000274 GCATTCCCGTTGCTCTGTTTT 60.000 47.619 0.00 0.00 37.14 2.43
1826 1832 3.070446 TCCCGTTGCTCTGTTTTTCTCTA 59.930 43.478 0.00 0.00 0.00 2.43
1833 1839 7.472543 GTTGCTCTGTTTTTCTCTACTTTTCA 58.527 34.615 0.00 0.00 0.00 2.69
1869 1875 8.664211 ATCCGACTTGTATTTCCTCTAATTTC 57.336 34.615 0.00 0.00 0.00 2.17
1890 1896 8.937634 ATTTCCAACTATGCATTTCTTCATTC 57.062 30.769 3.54 0.00 0.00 2.67
1934 1940 4.155462 GCAGAGACTGATGCATCAAAAAGA 59.845 41.667 28.39 6.42 42.11 2.52
1936 1942 6.084925 CAGAGACTGATGCATCAAAAAGAAC 58.915 40.000 28.39 15.84 36.18 3.01
1939 1945 5.048224 AGACTGATGCATCAAAAAGAACAGG 60.048 40.000 28.39 15.59 36.18 4.00
1988 1994 2.751166 GCTCACAAGCTCAAGTAGGA 57.249 50.000 0.00 0.00 45.55 2.94
1989 1995 2.615869 GCTCACAAGCTCAAGTAGGAG 58.384 52.381 0.00 0.00 45.55 3.69
1996 2002 3.450028 CTCAAGTAGGAGCACCAGC 57.550 57.895 2.07 0.00 42.56 4.85
1997 2003 0.610174 CTCAAGTAGGAGCACCAGCA 59.390 55.000 2.07 0.00 45.49 4.41
1998 2004 1.002430 CTCAAGTAGGAGCACCAGCAA 59.998 52.381 2.07 0.00 45.49 3.91
1999 2005 1.002430 TCAAGTAGGAGCACCAGCAAG 59.998 52.381 2.07 0.00 45.49 4.01
2000 2006 1.002430 CAAGTAGGAGCACCAGCAAGA 59.998 52.381 2.07 0.00 45.49 3.02
2001 2007 0.901124 AGTAGGAGCACCAGCAAGAG 59.099 55.000 2.07 0.00 45.49 2.85
2002 2008 0.107945 GTAGGAGCACCAGCAAGAGG 60.108 60.000 2.07 0.00 45.49 3.69
2003 2009 1.903877 TAGGAGCACCAGCAAGAGGC 61.904 60.000 2.07 0.00 45.49 4.70
2004 2010 2.749441 GAGCACCAGCAAGAGGCC 60.749 66.667 0.00 0.00 46.50 5.19
2005 2011 4.357279 AGCACCAGCAAGAGGCCC 62.357 66.667 0.00 0.00 46.50 5.80
2006 2012 4.666253 GCACCAGCAAGAGGCCCA 62.666 66.667 0.00 0.00 46.50 5.36
2007 2013 2.115910 CACCAGCAAGAGGCCCAA 59.884 61.111 0.00 0.00 46.50 4.12
2008 2014 2.116125 ACCAGCAAGAGGCCCAAC 59.884 61.111 0.00 0.00 46.50 3.77
2009 2015 2.115910 CCAGCAAGAGGCCCAACA 59.884 61.111 0.00 0.00 46.50 3.33
2010 2016 1.531365 CCAGCAAGAGGCCCAACAA 60.531 57.895 0.00 0.00 46.50 2.83
2011 2017 1.530013 CCAGCAAGAGGCCCAACAAG 61.530 60.000 0.00 0.00 46.50 3.16
2012 2018 1.905354 AGCAAGAGGCCCAACAAGC 60.905 57.895 0.00 0.00 46.50 4.01
2013 2019 1.905354 GCAAGAGGCCCAACAAGCT 60.905 57.895 0.00 0.00 36.11 3.74
2014 2020 1.871126 GCAAGAGGCCCAACAAGCTC 61.871 60.000 0.00 0.00 36.11 4.09
2015 2021 0.538057 CAAGAGGCCCAACAAGCTCA 60.538 55.000 0.00 0.00 0.00 4.26
2016 2022 0.538287 AAGAGGCCCAACAAGCTCAC 60.538 55.000 0.00 0.00 0.00 3.51
2017 2023 1.228245 GAGGCCCAACAAGCTCACA 60.228 57.895 0.00 0.00 0.00 3.58
2018 2024 0.823356 GAGGCCCAACAAGCTCACAA 60.823 55.000 0.00 0.00 0.00 3.33
2019 2025 0.825010 AGGCCCAACAAGCTCACAAG 60.825 55.000 0.00 0.00 0.00 3.16
2031 2037 3.279853 GCTCACAAGCTCCAAAAAGAG 57.720 47.619 0.00 0.00 45.55 2.85
2032 2038 2.030451 GCTCACAAGCTCCAAAAAGAGG 60.030 50.000 0.00 0.00 45.55 3.69
2033 2039 3.217626 CTCACAAGCTCCAAAAAGAGGT 58.782 45.455 0.00 0.00 46.26 3.85
2034 2040 3.214328 TCACAAGCTCCAAAAAGAGGTC 58.786 45.455 0.00 0.00 43.61 3.85
2035 2041 2.294512 CACAAGCTCCAAAAAGAGGTCC 59.705 50.000 0.00 0.00 43.61 4.46
2036 2042 1.537202 CAAGCTCCAAAAAGAGGTCCG 59.463 52.381 0.00 0.00 43.61 4.79
2037 2043 0.036875 AGCTCCAAAAAGAGGTCCGG 59.963 55.000 0.00 0.00 40.52 5.14
2038 2044 1.587043 GCTCCAAAAAGAGGTCCGGC 61.587 60.000 0.00 0.00 34.26 6.13
2039 2045 0.250727 CTCCAAAAAGAGGTCCGGCA 60.251 55.000 0.00 0.00 0.00 5.69
2040 2046 0.183971 TCCAAAAAGAGGTCCGGCAA 59.816 50.000 0.00 0.00 0.00 4.52
2041 2047 0.598065 CCAAAAAGAGGTCCGGCAAG 59.402 55.000 0.00 0.00 0.00 4.01
2042 2048 0.039165 CAAAAAGAGGTCCGGCAAGC 60.039 55.000 0.00 0.00 0.00 4.01
2043 2049 0.178990 AAAAAGAGGTCCGGCAAGCT 60.179 50.000 0.00 0.00 0.00 3.74
2044 2050 0.606673 AAAAGAGGTCCGGCAAGCTC 60.607 55.000 13.09 13.09 42.73 4.09
2045 2051 1.768684 AAAGAGGTCCGGCAAGCTCA 61.769 55.000 20.66 0.00 44.40 4.26
2046 2052 2.435059 GAGGTCCGGCAAGCTCAC 60.435 66.667 15.43 0.00 42.14 3.51
2047 2053 3.240134 GAGGTCCGGCAAGCTCACA 62.240 63.158 15.43 0.00 42.14 3.58
2048 2054 2.281484 GGTCCGGCAAGCTCACAA 60.281 61.111 0.00 0.00 0.00 3.33
2049 2055 2.328099 GGTCCGGCAAGCTCACAAG 61.328 63.158 0.00 0.00 0.00 3.16
2050 2056 1.301716 GTCCGGCAAGCTCACAAGA 60.302 57.895 0.00 0.00 0.00 3.02
2051 2057 0.674895 GTCCGGCAAGCTCACAAGAT 60.675 55.000 0.00 0.00 0.00 2.40
2052 2058 0.674581 TCCGGCAAGCTCACAAGATG 60.675 55.000 0.00 0.00 0.00 2.90
2053 2059 1.136147 CGGCAAGCTCACAAGATGC 59.864 57.895 0.00 0.00 36.61 3.91
2054 2060 1.579964 CGGCAAGCTCACAAGATGCA 61.580 55.000 6.63 0.00 38.14 3.96
2055 2061 0.599558 GGCAAGCTCACAAGATGCAA 59.400 50.000 6.63 0.00 38.14 4.08
2056 2062 1.402456 GGCAAGCTCACAAGATGCAAG 60.402 52.381 6.63 0.00 38.14 4.01
2057 2063 1.268899 GCAAGCTCACAAGATGCAAGT 59.731 47.619 0.00 0.00 37.05 3.16
2058 2064 2.485426 GCAAGCTCACAAGATGCAAGTA 59.515 45.455 0.00 0.00 37.05 2.24
2059 2065 3.425892 GCAAGCTCACAAGATGCAAGTAG 60.426 47.826 0.00 0.00 37.05 2.57
2060 2066 2.354259 AGCTCACAAGATGCAAGTAGC 58.646 47.619 0.00 0.00 45.96 3.58
2061 2067 2.027377 AGCTCACAAGATGCAAGTAGCT 60.027 45.455 0.00 0.00 45.94 3.32
2062 2068 2.351111 GCTCACAAGATGCAAGTAGCTC 59.649 50.000 0.00 0.00 45.94 4.09
2063 2069 3.859443 CTCACAAGATGCAAGTAGCTCT 58.141 45.455 0.00 0.00 45.94 4.09
2064 2070 3.854666 TCACAAGATGCAAGTAGCTCTC 58.145 45.455 0.00 0.00 45.94 3.20
2065 2071 3.259123 TCACAAGATGCAAGTAGCTCTCA 59.741 43.478 0.00 0.00 45.94 3.27
2066 2072 3.999001 CACAAGATGCAAGTAGCTCTCAA 59.001 43.478 0.00 0.00 45.94 3.02
2067 2073 4.453478 CACAAGATGCAAGTAGCTCTCAAA 59.547 41.667 0.00 0.00 45.94 2.69
2068 2074 5.123502 CACAAGATGCAAGTAGCTCTCAAAT 59.876 40.000 0.00 0.00 45.94 2.32
2069 2075 5.709164 ACAAGATGCAAGTAGCTCTCAAATT 59.291 36.000 0.00 0.00 45.94 1.82
2070 2076 5.814764 AGATGCAAGTAGCTCTCAAATTG 57.185 39.130 0.00 0.00 45.94 2.32
2071 2077 3.837213 TGCAAGTAGCTCTCAAATTGC 57.163 42.857 11.43 11.43 45.94 3.56
2072 2078 3.837213 GCAAGTAGCTCTCAAATTGCA 57.163 42.857 13.02 0.00 41.92 4.08
2073 2079 3.189910 TGCAAGTAGCTCTCAAATTGCAG 59.810 43.478 15.84 0.00 45.66 4.41
2074 2080 3.756069 CAAGTAGCTCTCAAATTGCAGC 58.244 45.455 8.22 8.22 0.00 5.25
2075 2081 3.063510 AGTAGCTCTCAAATTGCAGCA 57.936 42.857 15.81 0.00 34.08 4.41
2076 2082 3.618351 AGTAGCTCTCAAATTGCAGCAT 58.382 40.909 15.81 6.70 34.08 3.79
2077 2083 3.626670 AGTAGCTCTCAAATTGCAGCATC 59.373 43.478 15.81 9.70 34.08 3.91
2078 2084 2.443416 AGCTCTCAAATTGCAGCATCA 58.557 42.857 15.81 0.00 34.08 3.07
2079 2085 2.823747 AGCTCTCAAATTGCAGCATCAA 59.176 40.909 15.81 0.00 34.08 2.57
2080 2086 3.119459 AGCTCTCAAATTGCAGCATCAAG 60.119 43.478 15.81 0.00 34.08 3.02
2081 2087 3.119602 GCTCTCAAATTGCAGCATCAAGA 60.120 43.478 10.60 0.00 0.00 3.02
2082 2088 4.440250 GCTCTCAAATTGCAGCATCAAGAT 60.440 41.667 10.60 0.00 0.00 2.40
2083 2089 5.651530 CTCTCAAATTGCAGCATCAAGATT 58.348 37.500 0.00 0.00 0.00 2.40
2084 2090 5.647589 TCTCAAATTGCAGCATCAAGATTC 58.352 37.500 0.00 0.00 0.00 2.52
2085 2091 5.184287 TCTCAAATTGCAGCATCAAGATTCA 59.816 36.000 0.00 0.00 0.00 2.57
2086 2092 5.785243 TCAAATTGCAGCATCAAGATTCAA 58.215 33.333 0.00 0.00 0.00 2.69
2087 2093 6.224584 TCAAATTGCAGCATCAAGATTCAAA 58.775 32.000 0.00 0.00 0.00 2.69
2088 2094 6.367695 TCAAATTGCAGCATCAAGATTCAAAG 59.632 34.615 0.00 0.00 0.00 2.77
2089 2095 3.226346 TGCAGCATCAAGATTCAAAGC 57.774 42.857 0.00 0.00 0.00 3.51
2090 2096 2.823747 TGCAGCATCAAGATTCAAAGCT 59.176 40.909 0.00 0.00 0.00 3.74
2091 2097 3.119602 TGCAGCATCAAGATTCAAAGCTC 60.120 43.478 0.00 0.00 0.00 4.09
2092 2098 3.734293 GCAGCATCAAGATTCAAAGCTCC 60.734 47.826 0.00 0.00 0.00 4.70
2093 2099 3.695060 CAGCATCAAGATTCAAAGCTCCT 59.305 43.478 0.00 0.00 0.00 3.69
2094 2100 4.880120 CAGCATCAAGATTCAAAGCTCCTA 59.120 41.667 0.00 0.00 0.00 2.94
2095 2101 5.007823 CAGCATCAAGATTCAAAGCTCCTAG 59.992 44.000 0.00 0.00 0.00 3.02
2096 2102 5.104610 AGCATCAAGATTCAAAGCTCCTAGA 60.105 40.000 0.00 0.00 0.00 2.43
2097 2103 5.236911 GCATCAAGATTCAAAGCTCCTAGAG 59.763 44.000 0.00 0.00 0.00 2.43
2098 2104 6.347696 CATCAAGATTCAAAGCTCCTAGAGT 58.652 40.000 0.00 0.00 31.39 3.24
2099 2105 5.728471 TCAAGATTCAAAGCTCCTAGAGTG 58.272 41.667 0.00 0.00 31.39 3.51
2100 2106 5.481824 TCAAGATTCAAAGCTCCTAGAGTGA 59.518 40.000 0.00 0.00 31.39 3.41
2101 2107 5.337578 AGATTCAAAGCTCCTAGAGTGAC 57.662 43.478 0.00 0.00 31.39 3.67
2102 2108 4.774726 AGATTCAAAGCTCCTAGAGTGACA 59.225 41.667 0.00 0.00 31.39 3.58
2103 2109 4.955811 TTCAAAGCTCCTAGAGTGACAA 57.044 40.909 0.00 0.00 31.39 3.18
2104 2110 4.258702 TCAAAGCTCCTAGAGTGACAAC 57.741 45.455 0.00 0.00 31.39 3.32
2105 2111 3.641436 TCAAAGCTCCTAGAGTGACAACA 59.359 43.478 0.00 0.00 31.39 3.33
2106 2112 4.100963 TCAAAGCTCCTAGAGTGACAACAA 59.899 41.667 0.00 0.00 31.39 2.83
2107 2113 3.951775 AGCTCCTAGAGTGACAACAAG 57.048 47.619 0.00 0.00 31.39 3.16
2108 2114 2.028567 AGCTCCTAGAGTGACAACAAGC 60.029 50.000 0.00 0.00 31.39 4.01
2109 2115 2.289072 GCTCCTAGAGTGACAACAAGCA 60.289 50.000 0.00 0.00 31.39 3.91
2110 2116 3.321497 CTCCTAGAGTGACAACAAGCAC 58.679 50.000 0.00 0.00 35.30 4.40
2111 2117 2.698274 TCCTAGAGTGACAACAAGCACA 59.302 45.455 0.00 0.00 37.48 4.57
2112 2118 3.133901 TCCTAGAGTGACAACAAGCACAA 59.866 43.478 0.00 0.00 37.48 3.33
2113 2119 3.876914 CCTAGAGTGACAACAAGCACAAA 59.123 43.478 0.00 0.00 37.48 2.83
2114 2120 4.516698 CCTAGAGTGACAACAAGCACAAAT 59.483 41.667 0.00 0.00 37.48 2.32
2115 2121 4.558538 AGAGTGACAACAAGCACAAATC 57.441 40.909 0.00 0.00 37.48 2.17
2116 2122 4.202441 AGAGTGACAACAAGCACAAATCT 58.798 39.130 0.00 0.00 37.48 2.40
2117 2123 4.641989 AGAGTGACAACAAGCACAAATCTT 59.358 37.500 0.00 0.00 37.48 2.40
2118 2124 4.675510 AGTGACAACAAGCACAAATCTTG 58.324 39.130 0.00 1.63 44.71 3.02
2119 2125 4.398988 AGTGACAACAAGCACAAATCTTGA 59.601 37.500 9.40 0.00 42.52 3.02
2120 2126 4.736793 GTGACAACAAGCACAAATCTTGAG 59.263 41.667 9.40 4.65 42.52 3.02
2121 2127 4.202040 TGACAACAAGCACAAATCTTGAGG 60.202 41.667 9.40 4.05 42.52 3.86
2122 2128 3.068590 ACAACAAGCACAAATCTTGAGGG 59.931 43.478 9.40 2.01 42.52 4.30
2123 2129 3.228188 ACAAGCACAAATCTTGAGGGA 57.772 42.857 9.40 0.00 42.52 4.20
2124 2130 3.565307 ACAAGCACAAATCTTGAGGGAA 58.435 40.909 9.40 0.00 42.52 3.97
2125 2131 3.571401 ACAAGCACAAATCTTGAGGGAAG 59.429 43.478 9.40 0.00 42.52 3.46
2126 2132 2.165998 AGCACAAATCTTGAGGGAAGC 58.834 47.619 0.00 0.00 0.00 3.86
2127 2133 1.888512 GCACAAATCTTGAGGGAAGCA 59.111 47.619 0.00 0.00 0.00 3.91
2128 2134 2.352127 GCACAAATCTTGAGGGAAGCAC 60.352 50.000 0.00 0.00 0.00 4.40
2129 2135 2.886523 CACAAATCTTGAGGGAAGCACA 59.113 45.455 0.00 0.00 0.00 4.57
2130 2136 3.508793 CACAAATCTTGAGGGAAGCACAT 59.491 43.478 0.00 0.00 0.00 3.21
2131 2137 3.760684 ACAAATCTTGAGGGAAGCACATC 59.239 43.478 0.00 0.00 0.00 3.06
2132 2138 4.015084 CAAATCTTGAGGGAAGCACATCT 58.985 43.478 0.00 0.00 0.00 2.90
2133 2139 2.775911 TCTTGAGGGAAGCACATCTG 57.224 50.000 0.00 0.00 0.00 2.90
2134 2140 1.093159 CTTGAGGGAAGCACATCTGC 58.907 55.000 0.00 0.00 44.63 4.26
2135 2141 0.401356 TTGAGGGAAGCACATCTGCA 59.599 50.000 0.00 0.00 46.97 4.41
2136 2142 0.035725 TGAGGGAAGCACATCTGCAG 60.036 55.000 7.63 7.63 46.97 4.41
2137 2143 0.747283 GAGGGAAGCACATCTGCAGG 60.747 60.000 15.13 0.36 46.97 4.85
2138 2144 1.751927 GGGAAGCACATCTGCAGGG 60.752 63.158 15.13 9.34 46.97 4.45
2139 2145 1.300963 GGAAGCACATCTGCAGGGA 59.699 57.895 15.13 0.00 46.97 4.20
2140 2146 0.747283 GGAAGCACATCTGCAGGGAG 60.747 60.000 15.13 6.65 46.97 4.30
2141 2147 0.251354 GAAGCACATCTGCAGGGAGA 59.749 55.000 15.13 0.00 46.97 3.71
2142 2148 0.252479 AAGCACATCTGCAGGGAGAG 59.748 55.000 15.13 4.09 46.97 3.20
2143 2149 1.153208 GCACATCTGCAGGGAGAGG 60.153 63.158 15.13 0.84 43.62 3.69
2144 2150 1.620739 GCACATCTGCAGGGAGAGGA 61.621 60.000 15.13 0.00 43.62 3.71
2145 2151 0.907486 CACATCTGCAGGGAGAGGAA 59.093 55.000 15.13 0.00 0.00 3.36
2146 2152 0.908198 ACATCTGCAGGGAGAGGAAC 59.092 55.000 15.13 0.00 0.00 3.62
2147 2153 0.907486 CATCTGCAGGGAGAGGAACA 59.093 55.000 15.13 0.00 0.00 3.18
2148 2154 1.280133 CATCTGCAGGGAGAGGAACAA 59.720 52.381 15.13 0.00 0.00 2.83
2149 2155 0.979665 TCTGCAGGGAGAGGAACAAG 59.020 55.000 15.13 0.00 0.00 3.16
2150 2156 0.035630 CTGCAGGGAGAGGAACAAGG 60.036 60.000 5.57 0.00 0.00 3.61
2151 2157 0.473694 TGCAGGGAGAGGAACAAGGA 60.474 55.000 0.00 0.00 0.00 3.36
2152 2158 0.251634 GCAGGGAGAGGAACAAGGAG 59.748 60.000 0.00 0.00 0.00 3.69
2153 2159 1.944177 CAGGGAGAGGAACAAGGAGA 58.056 55.000 0.00 0.00 0.00 3.71
2154 2160 1.830477 CAGGGAGAGGAACAAGGAGAG 59.170 57.143 0.00 0.00 0.00 3.20
2155 2161 1.199615 GGGAGAGGAACAAGGAGAGG 58.800 60.000 0.00 0.00 0.00 3.69
2156 2162 1.273324 GGGAGAGGAACAAGGAGAGGA 60.273 57.143 0.00 0.00 0.00 3.71
2157 2163 2.107366 GGAGAGGAACAAGGAGAGGAG 58.893 57.143 0.00 0.00 0.00 3.69
2158 2164 1.480545 GAGAGGAACAAGGAGAGGAGC 59.519 57.143 0.00 0.00 0.00 4.70
2159 2165 1.203237 AGAGGAACAAGGAGAGGAGCA 60.203 52.381 0.00 0.00 0.00 4.26
2160 2166 1.206849 GAGGAACAAGGAGAGGAGCAG 59.793 57.143 0.00 0.00 0.00 4.24
2161 2167 0.251634 GGAACAAGGAGAGGAGCAGG 59.748 60.000 0.00 0.00 0.00 4.85
2162 2168 0.251634 GAACAAGGAGAGGAGCAGGG 59.748 60.000 0.00 0.00 0.00 4.45
2163 2169 0.178891 AACAAGGAGAGGAGCAGGGA 60.179 55.000 0.00 0.00 0.00 4.20
2164 2170 0.907230 ACAAGGAGAGGAGCAGGGAC 60.907 60.000 0.00 0.00 0.00 4.46
2165 2171 0.906756 CAAGGAGAGGAGCAGGGACA 60.907 60.000 0.00 0.00 0.00 4.02
2166 2172 0.043940 AAGGAGAGGAGCAGGGACAT 59.956 55.000 0.00 0.00 0.00 3.06
2167 2173 0.690411 AGGAGAGGAGCAGGGACATG 60.690 60.000 0.00 0.00 0.00 3.21
2168 2174 0.689080 GGAGAGGAGCAGGGACATGA 60.689 60.000 0.00 0.00 0.00 3.07
2169 2175 0.752054 GAGAGGAGCAGGGACATGAG 59.248 60.000 0.00 0.00 0.00 2.90
2170 2176 1.145819 GAGGAGCAGGGACATGAGC 59.854 63.158 0.00 0.00 0.00 4.26
2171 2177 1.614525 AGGAGCAGGGACATGAGCA 60.615 57.895 0.00 0.00 0.00 4.26
2172 2178 1.153208 GGAGCAGGGACATGAGCAG 60.153 63.158 0.00 0.00 0.00 4.24
2173 2179 1.153208 GAGCAGGGACATGAGCAGG 60.153 63.158 0.00 0.00 0.00 4.85
2174 2180 1.614525 AGCAGGGACATGAGCAGGA 60.615 57.895 0.00 0.00 0.00 3.86
2175 2181 1.203441 AGCAGGGACATGAGCAGGAA 61.203 55.000 0.00 0.00 0.00 3.36
2176 2182 0.747283 GCAGGGACATGAGCAGGAAG 60.747 60.000 0.00 0.00 0.00 3.46
2177 2183 0.907486 CAGGGACATGAGCAGGAAGA 59.093 55.000 0.00 0.00 0.00 2.87
2178 2184 1.134461 CAGGGACATGAGCAGGAAGAG 60.134 57.143 0.00 0.00 0.00 2.85
2179 2185 0.179936 GGGACATGAGCAGGAAGAGG 59.820 60.000 0.00 0.00 0.00 3.69
2180 2186 1.198713 GGACATGAGCAGGAAGAGGA 58.801 55.000 0.00 0.00 0.00 3.71
2181 2187 1.134551 GGACATGAGCAGGAAGAGGAC 60.135 57.143 0.00 0.00 0.00 3.85
2182 2188 0.908198 ACATGAGCAGGAAGAGGACC 59.092 55.000 0.00 0.00 0.00 4.46
2183 2189 0.907486 CATGAGCAGGAAGAGGACCA 59.093 55.000 0.00 0.00 0.00 4.02
2184 2190 1.134461 CATGAGCAGGAAGAGGACCAG 60.134 57.143 0.00 0.00 0.00 4.00
2185 2191 1.220477 GAGCAGGAAGAGGACCAGC 59.780 63.158 0.00 0.00 39.63 4.85
2186 2192 1.537397 AGCAGGAAGAGGACCAGCA 60.537 57.895 0.00 0.00 41.33 4.41
2187 2193 1.130054 AGCAGGAAGAGGACCAGCAA 61.130 55.000 0.00 0.00 41.33 3.91
2188 2194 0.957888 GCAGGAAGAGGACCAGCAAC 60.958 60.000 0.00 0.00 39.24 4.17
2189 2195 0.397941 CAGGAAGAGGACCAGCAACA 59.602 55.000 0.00 0.00 0.00 3.33
2190 2196 1.004044 CAGGAAGAGGACCAGCAACAT 59.996 52.381 0.00 0.00 0.00 2.71
2191 2197 1.280421 AGGAAGAGGACCAGCAACATC 59.720 52.381 0.00 0.00 0.00 3.06
2192 2198 1.003580 GGAAGAGGACCAGCAACATCA 59.996 52.381 0.00 0.00 0.00 3.07
2193 2199 2.354259 GAAGAGGACCAGCAACATCAG 58.646 52.381 0.00 0.00 0.00 2.90
2194 2200 0.617413 AGAGGACCAGCAACATCAGG 59.383 55.000 0.00 0.00 0.00 3.86
2195 2201 0.393537 GAGGACCAGCAACATCAGGG 60.394 60.000 0.00 0.00 0.00 4.45
2196 2202 1.136329 AGGACCAGCAACATCAGGGT 61.136 55.000 0.00 0.00 33.78 4.34
2197 2203 0.962356 GGACCAGCAACATCAGGGTG 60.962 60.000 0.00 0.00 30.55 4.61
2198 2204 4.007457 CCAGCAACATCAGGGTGG 57.993 61.111 0.00 0.00 45.11 4.61
2200 2206 3.583054 CAGCAACATCAGGGTGGAT 57.417 52.632 0.00 0.00 0.00 3.41
2207 2213 2.867109 CATCAGGGTGGATGGGATAC 57.133 55.000 0.00 0.00 40.75 2.24
2208 2214 2.342659 CATCAGGGTGGATGGGATACT 58.657 52.381 0.00 0.00 40.75 2.12
2209 2215 2.587060 TCAGGGTGGATGGGATACTT 57.413 50.000 0.00 0.00 0.00 2.24
2210 2216 2.858644 TCAGGGTGGATGGGATACTTT 58.141 47.619 0.00 0.00 0.00 2.66
2211 2217 3.197983 TCAGGGTGGATGGGATACTTTT 58.802 45.455 0.00 0.00 0.00 2.27
2212 2218 3.596046 TCAGGGTGGATGGGATACTTTTT 59.404 43.478 0.00 0.00 0.00 1.94
2232 2238 3.488048 GCACGTGGCAATTGCTAAA 57.512 47.368 28.42 12.92 43.97 1.85
2233 2239 1.339711 GCACGTGGCAATTGCTAAAG 58.660 50.000 28.42 21.28 43.97 1.85
2234 2240 1.068610 GCACGTGGCAATTGCTAAAGA 60.069 47.619 28.42 6.48 43.97 2.52
2235 2241 2.415893 GCACGTGGCAATTGCTAAAGAT 60.416 45.455 28.42 7.38 43.97 2.40
2236 2242 3.173599 CACGTGGCAATTGCTAAAGATG 58.826 45.455 28.42 14.99 41.70 2.90
2237 2243 2.819608 ACGTGGCAATTGCTAAAGATGT 59.180 40.909 28.42 15.47 41.70 3.06
2238 2244 3.255642 ACGTGGCAATTGCTAAAGATGTT 59.744 39.130 28.42 3.43 41.70 2.71
2239 2245 4.236935 CGTGGCAATTGCTAAAGATGTTT 58.763 39.130 28.42 0.00 41.70 2.83
2240 2246 4.685628 CGTGGCAATTGCTAAAGATGTTTT 59.314 37.500 28.42 0.00 41.70 2.43
2241 2247 5.164061 CGTGGCAATTGCTAAAGATGTTTTC 60.164 40.000 28.42 8.74 41.70 2.29
2242 2248 5.120674 GTGGCAATTGCTAAAGATGTTTTCC 59.879 40.000 28.42 8.32 41.70 3.13
2243 2249 5.221601 TGGCAATTGCTAAAGATGTTTTCCA 60.222 36.000 28.42 10.78 41.70 3.53
2244 2250 5.700373 GGCAATTGCTAAAGATGTTTTCCAA 59.300 36.000 28.42 0.00 41.70 3.53
2245 2251 6.347644 GGCAATTGCTAAAGATGTTTTCCAAC 60.348 38.462 28.42 2.83 41.70 3.77
2246 2252 6.424812 GCAATTGCTAAAGATGTTTTCCAACT 59.575 34.615 23.21 0.00 38.21 3.16
2247 2253 7.598493 GCAATTGCTAAAGATGTTTTCCAACTA 59.402 33.333 23.21 0.00 38.21 2.24
2248 2254 9.474920 CAATTGCTAAAGATGTTTTCCAACTAA 57.525 29.630 0.00 0.00 33.58 2.24
2250 2256 9.643693 ATTGCTAAAGATGTTTTCCAACTAATG 57.356 29.630 0.00 0.00 33.58 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.187946 CCTCACCGAGGCCATCAC 59.812 66.667 5.01 0.00 43.29 3.06
87 89 2.957402 TCACCTGCCAGAATCTTGTT 57.043 45.000 0.00 0.00 0.00 2.83
104 106 3.002791 GTGCTCAAGAATTCGGTCATCA 58.997 45.455 0.00 0.00 0.00 3.07
109 111 2.568623 AAGGTGCTCAAGAATTCGGT 57.431 45.000 0.00 0.00 0.00 4.69
205 207 2.377193 ACCAATACTACCTGGCCACAAA 59.623 45.455 0.00 0.00 36.03 2.83
316 319 2.897969 GAGGAGAAGTACAAGGTGGTCA 59.102 50.000 0.00 0.00 0.00 4.02
386 389 3.384146 TCTCGGTAGTGTACACCAACAAA 59.616 43.478 22.28 11.15 35.67 2.83
410 413 0.393077 ACCCACAGAAGGTTCACGAG 59.607 55.000 0.00 0.00 32.05 4.18
413 416 1.594331 GACACCCACAGAAGGTTCAC 58.406 55.000 0.00 0.00 34.56 3.18
447 451 0.793478 CGACGAGCAGTAGTTCACCG 60.793 60.000 0.00 0.00 0.00 4.94
493 497 1.880027 CCCAGATTTATTACAGCGGCC 59.120 52.381 0.00 0.00 0.00 6.13
499 503 5.951204 TGATCATGCCCCAGATTTATTACA 58.049 37.500 0.00 0.00 0.00 2.41
500 504 6.899393 TTGATCATGCCCCAGATTTATTAC 57.101 37.500 0.00 0.00 0.00 1.89
501 505 7.015487 CCTTTTGATCATGCCCCAGATTTATTA 59.985 37.037 0.00 0.00 0.00 0.98
502 506 6.183361 CCTTTTGATCATGCCCCAGATTTATT 60.183 38.462 0.00 0.00 0.00 1.40
503 507 5.306160 CCTTTTGATCATGCCCCAGATTTAT 59.694 40.000 0.00 0.00 0.00 1.40
504 508 4.650588 CCTTTTGATCATGCCCCAGATTTA 59.349 41.667 0.00 0.00 0.00 1.40
505 509 3.453353 CCTTTTGATCATGCCCCAGATTT 59.547 43.478 0.00 0.00 0.00 2.17
506 510 3.036091 CCTTTTGATCATGCCCCAGATT 58.964 45.455 0.00 0.00 0.00 2.40
507 511 2.023695 ACCTTTTGATCATGCCCCAGAT 60.024 45.455 0.00 0.00 0.00 2.90
508 512 1.358787 ACCTTTTGATCATGCCCCAGA 59.641 47.619 0.00 0.00 0.00 3.86
509 513 1.856629 ACCTTTTGATCATGCCCCAG 58.143 50.000 0.00 0.00 0.00 4.45
510 514 1.901159 CAACCTTTTGATCATGCCCCA 59.099 47.619 0.00 0.00 34.24 4.96
511 515 2.178580 TCAACCTTTTGATCATGCCCC 58.821 47.619 0.00 0.00 36.79 5.80
512 516 3.511146 TCTTCAACCTTTTGATCATGCCC 59.489 43.478 0.00 0.00 41.50 5.36
513 517 4.460382 TCTCTTCAACCTTTTGATCATGCC 59.540 41.667 0.00 0.00 41.50 4.40
514 518 5.048504 TGTCTCTTCAACCTTTTGATCATGC 60.049 40.000 0.00 0.00 41.50 4.06
515 519 6.016860 TGTGTCTCTTCAACCTTTTGATCATG 60.017 38.462 0.00 0.00 41.50 3.07
516 520 6.064060 TGTGTCTCTTCAACCTTTTGATCAT 58.936 36.000 0.00 0.00 41.50 2.45
517 521 5.436175 TGTGTCTCTTCAACCTTTTGATCA 58.564 37.500 0.00 0.00 41.50 2.92
518 522 6.377327 TTGTGTCTCTTCAACCTTTTGATC 57.623 37.500 0.00 0.00 41.50 2.92
519 523 5.300286 CCTTGTGTCTCTTCAACCTTTTGAT 59.700 40.000 0.00 0.00 41.50 2.57
520 524 4.640201 CCTTGTGTCTCTTCAACCTTTTGA 59.360 41.667 0.00 0.00 40.14 2.69
521 525 4.202050 CCCTTGTGTCTCTTCAACCTTTTG 60.202 45.833 0.00 0.00 0.00 2.44
522 526 3.954258 CCCTTGTGTCTCTTCAACCTTTT 59.046 43.478 0.00 0.00 0.00 2.27
523 527 3.053619 ACCCTTGTGTCTCTTCAACCTTT 60.054 43.478 0.00 0.00 0.00 3.11
524 528 2.509964 ACCCTTGTGTCTCTTCAACCTT 59.490 45.455 0.00 0.00 0.00 3.50
525 529 2.127708 ACCCTTGTGTCTCTTCAACCT 58.872 47.619 0.00 0.00 0.00 3.50
526 530 2.640316 ACCCTTGTGTCTCTTCAACC 57.360 50.000 0.00 0.00 0.00 3.77
527 531 6.438763 CATTTAACCCTTGTGTCTCTTCAAC 58.561 40.000 0.00 0.00 0.00 3.18
528 532 5.534654 CCATTTAACCCTTGTGTCTCTTCAA 59.465 40.000 0.00 0.00 0.00 2.69
529 533 5.070001 CCATTTAACCCTTGTGTCTCTTCA 58.930 41.667 0.00 0.00 0.00 3.02
530 534 4.082733 GCCATTTAACCCTTGTGTCTCTTC 60.083 45.833 0.00 0.00 0.00 2.87
531 535 3.826729 GCCATTTAACCCTTGTGTCTCTT 59.173 43.478 0.00 0.00 0.00 2.85
532 536 3.421844 GCCATTTAACCCTTGTGTCTCT 58.578 45.455 0.00 0.00 0.00 3.10
533 537 2.492088 GGCCATTTAACCCTTGTGTCTC 59.508 50.000 0.00 0.00 0.00 3.36
534 538 2.525368 GGCCATTTAACCCTTGTGTCT 58.475 47.619 0.00 0.00 0.00 3.41
535 539 1.201414 CGGCCATTTAACCCTTGTGTC 59.799 52.381 2.24 0.00 0.00 3.67
536 540 1.253100 CGGCCATTTAACCCTTGTGT 58.747 50.000 2.24 0.00 0.00 3.72
537 541 0.108851 GCGGCCATTTAACCCTTGTG 60.109 55.000 2.24 0.00 0.00 3.33
538 542 0.251608 AGCGGCCATTTAACCCTTGT 60.252 50.000 2.24 0.00 0.00 3.16
539 543 0.173255 CAGCGGCCATTTAACCCTTG 59.827 55.000 2.24 0.00 0.00 3.61
540 544 0.251608 ACAGCGGCCATTTAACCCTT 60.252 50.000 2.24 0.00 0.00 3.95
541 545 0.621609 TACAGCGGCCATTTAACCCT 59.378 50.000 2.24 0.00 0.00 4.34
542 546 1.465794 TTACAGCGGCCATTTAACCC 58.534 50.000 2.24 0.00 0.00 4.11
543 547 4.904253 TTATTACAGCGGCCATTTAACC 57.096 40.909 2.24 0.00 0.00 2.85
544 548 5.689961 CCATTTATTACAGCGGCCATTTAAC 59.310 40.000 2.24 0.00 0.00 2.01
545 549 5.221342 CCCATTTATTACAGCGGCCATTTAA 60.221 40.000 2.24 0.00 0.00 1.52
546 550 4.279671 CCCATTTATTACAGCGGCCATTTA 59.720 41.667 2.24 0.00 0.00 1.40
547 551 3.069443 CCCATTTATTACAGCGGCCATTT 59.931 43.478 2.24 0.00 0.00 2.32
548 552 2.627699 CCCATTTATTACAGCGGCCATT 59.372 45.455 2.24 0.00 0.00 3.16
549 553 2.238521 CCCATTTATTACAGCGGCCAT 58.761 47.619 2.24 0.00 0.00 4.40
550 554 1.686355 CCCATTTATTACAGCGGCCA 58.314 50.000 2.24 0.00 0.00 5.36
551 555 0.958822 CCCCATTTATTACAGCGGCC 59.041 55.000 0.00 0.00 0.00 6.13
552 556 0.958822 CCCCCATTTATTACAGCGGC 59.041 55.000 0.00 0.00 0.00 6.53
553 557 0.958822 GCCCCCATTTATTACAGCGG 59.041 55.000 0.00 0.00 0.00 5.52
554 558 0.958822 GGCCCCCATTTATTACAGCG 59.041 55.000 0.00 0.00 0.00 5.18
555 559 0.958822 CGGCCCCCATTTATTACAGC 59.041 55.000 0.00 0.00 0.00 4.40
556 560 2.227194 GTCGGCCCCCATTTATTACAG 58.773 52.381 0.00 0.00 0.00 2.74
557 561 1.133730 GGTCGGCCCCCATTTATTACA 60.134 52.381 0.00 0.00 0.00 2.41
558 562 1.612676 GGTCGGCCCCCATTTATTAC 58.387 55.000 0.00 0.00 0.00 1.89
559 563 0.108963 CGGTCGGCCCCCATTTATTA 59.891 55.000 0.00 0.00 0.00 0.98
560 564 1.152839 CGGTCGGCCCCCATTTATT 60.153 57.895 0.00 0.00 0.00 1.40
561 565 2.513895 CGGTCGGCCCCCATTTAT 59.486 61.111 0.00 0.00 0.00 1.40
562 566 3.799672 CCGGTCGGCCCCCATTTA 61.800 66.667 0.00 0.00 0.00 1.40
572 576 0.600255 GATGATTACAGGCCGGTCGG 60.600 60.000 13.31 4.08 38.57 4.79
573 577 0.104120 TGATGATTACAGGCCGGTCG 59.896 55.000 13.31 0.00 0.00 4.79
574 578 1.583054 GTGATGATTACAGGCCGGTC 58.417 55.000 13.31 0.00 0.00 4.79
575 579 0.179084 CGTGATGATTACAGGCCGGT 60.179 55.000 14.55 14.55 0.00 5.28
576 580 0.179084 ACGTGATGATTACAGGCCGG 60.179 55.000 0.00 0.00 0.00 6.13
577 581 2.502213 TACGTGATGATTACAGGCCG 57.498 50.000 0.00 0.00 0.00 6.13
578 582 4.127171 ACAATACGTGATGATTACAGGCC 58.873 43.478 0.00 0.00 0.00 5.19
579 583 4.808895 TGACAATACGTGATGATTACAGGC 59.191 41.667 0.00 0.00 0.00 4.85
580 584 5.463392 CCTGACAATACGTGATGATTACAGG 59.537 44.000 14.20 14.20 35.02 4.00
581 585 6.199154 GTCCTGACAATACGTGATGATTACAG 59.801 42.308 0.00 3.69 0.00 2.74
582 586 6.040247 GTCCTGACAATACGTGATGATTACA 58.960 40.000 0.00 0.00 0.00 2.41
583 587 5.173312 CGTCCTGACAATACGTGATGATTAC 59.827 44.000 0.00 0.00 32.16 1.89
584 588 5.278604 CGTCCTGACAATACGTGATGATTA 58.721 41.667 0.00 0.00 32.16 1.75
585 589 4.112634 CGTCCTGACAATACGTGATGATT 58.887 43.478 0.00 0.00 32.16 2.57
586 590 3.706698 CGTCCTGACAATACGTGATGAT 58.293 45.455 0.00 0.00 32.16 2.45
587 591 3.145212 CGTCCTGACAATACGTGATGA 57.855 47.619 0.00 0.00 32.16 2.92
593 597 3.486108 GCTATGAACGTCCTGACAATACG 59.514 47.826 7.49 7.49 42.17 3.06
594 598 3.486108 CGCTATGAACGTCCTGACAATAC 59.514 47.826 0.00 0.00 0.00 1.89
595 599 3.490249 CCGCTATGAACGTCCTGACAATA 60.490 47.826 0.00 0.00 0.00 1.90
596 600 2.540515 CGCTATGAACGTCCTGACAAT 58.459 47.619 0.00 0.00 0.00 2.71
597 601 1.403647 CCGCTATGAACGTCCTGACAA 60.404 52.381 0.00 0.00 0.00 3.18
598 602 0.172578 CCGCTATGAACGTCCTGACA 59.827 55.000 0.00 0.00 0.00 3.58
599 603 0.454600 TCCGCTATGAACGTCCTGAC 59.545 55.000 0.00 0.00 0.00 3.51
600 604 0.738975 CTCCGCTATGAACGTCCTGA 59.261 55.000 0.00 0.00 0.00 3.86
601 605 0.249073 CCTCCGCTATGAACGTCCTG 60.249 60.000 0.00 0.00 0.00 3.86
602 606 0.395311 TCCTCCGCTATGAACGTCCT 60.395 55.000 0.00 0.00 0.00 3.85
603 607 0.674534 ATCCTCCGCTATGAACGTCC 59.325 55.000 0.00 0.00 0.00 4.79
604 608 2.395654 GAATCCTCCGCTATGAACGTC 58.604 52.381 0.00 0.00 0.00 4.34
605 609 1.068741 GGAATCCTCCGCTATGAACGT 59.931 52.381 0.00 0.00 30.03 3.99
606 610 1.068588 TGGAATCCTCCGCTATGAACG 59.931 52.381 0.00 0.00 45.85 3.95
607 611 2.103263 ACTGGAATCCTCCGCTATGAAC 59.897 50.000 0.00 0.00 45.85 3.18
608 612 2.103094 CACTGGAATCCTCCGCTATGAA 59.897 50.000 0.00 0.00 45.85 2.57
609 613 1.688735 CACTGGAATCCTCCGCTATGA 59.311 52.381 0.00 0.00 45.85 2.15
610 614 1.875576 GCACTGGAATCCTCCGCTATG 60.876 57.143 0.00 0.00 45.85 2.23
611 615 0.394565 GCACTGGAATCCTCCGCTAT 59.605 55.000 0.00 0.00 45.85 2.97
612 616 0.975556 TGCACTGGAATCCTCCGCTA 60.976 55.000 0.00 0.00 45.85 4.26
613 617 2.293318 TGCACTGGAATCCTCCGCT 61.293 57.895 0.00 0.00 45.85 5.52
614 618 2.109126 GTGCACTGGAATCCTCCGC 61.109 63.158 10.32 0.52 45.85 5.54
615 619 1.811266 CGTGCACTGGAATCCTCCG 60.811 63.158 16.19 0.00 45.85 4.63
616 620 2.109126 GCGTGCACTGGAATCCTCC 61.109 63.158 16.19 0.00 42.81 4.30
617 621 0.674895 AAGCGTGCACTGGAATCCTC 60.675 55.000 16.19 0.00 0.00 3.71
618 622 0.957395 CAAGCGTGCACTGGAATCCT 60.957 55.000 16.19 0.00 0.00 3.24
619 623 0.955428 TCAAGCGTGCACTGGAATCC 60.955 55.000 16.19 0.00 0.00 3.01
620 624 0.166814 GTCAAGCGTGCACTGGAATC 59.833 55.000 16.19 0.00 0.00 2.52
621 625 0.534877 TGTCAAGCGTGCACTGGAAT 60.535 50.000 16.19 0.00 0.00 3.01
622 626 0.746204 TTGTCAAGCGTGCACTGGAA 60.746 50.000 16.19 1.13 0.00 3.53
623 627 1.153269 TTGTCAAGCGTGCACTGGA 60.153 52.632 16.19 3.94 0.00 3.86
624 628 1.009675 GTTGTCAAGCGTGCACTGG 60.010 57.895 16.19 0.69 0.00 4.00
625 629 0.589729 GTGTTGTCAAGCGTGCACTG 60.590 55.000 16.19 9.73 0.00 3.66
626 630 1.714899 GGTGTTGTCAAGCGTGCACT 61.715 55.000 16.19 0.00 0.00 4.40
627 631 1.298339 GGTGTTGTCAAGCGTGCAC 60.298 57.895 6.82 6.82 0.00 4.57
628 632 2.818487 CGGTGTTGTCAAGCGTGCA 61.818 57.895 0.00 0.00 34.02 4.57
629 633 2.052237 CGGTGTTGTCAAGCGTGC 60.052 61.111 0.00 0.00 34.02 5.34
630 634 2.052237 GCGGTGTTGTCAAGCGTG 60.052 61.111 0.00 0.00 40.50 5.34
631 635 2.512745 TGCGGTGTTGTCAAGCGT 60.513 55.556 0.00 0.00 40.50 5.07
632 636 2.052237 GTGCGGTGTTGTCAAGCG 60.052 61.111 0.00 0.00 41.28 4.68
633 637 2.331451 GGTGCGGTGTTGTCAAGC 59.669 61.111 0.00 0.00 0.00 4.01
634 638 2.631428 CGGTGCGGTGTTGTCAAG 59.369 61.111 0.00 0.00 0.00 3.02
635 639 3.578272 GCGGTGCGGTGTTGTCAA 61.578 61.111 0.00 0.00 0.00 3.18
636 640 4.840005 TGCGGTGCGGTGTTGTCA 62.840 61.111 0.00 0.00 0.00 3.58
637 641 4.307908 GTGCGGTGCGGTGTTGTC 62.308 66.667 0.00 0.00 0.00 3.18
648 652 0.522180 TCAAACAAAACACGTGCGGT 59.478 45.000 17.22 5.79 0.00 5.68
649 653 0.911184 GTCAAACAAAACACGTGCGG 59.089 50.000 17.22 5.10 0.00 5.69
650 654 0.911184 GGTCAAACAAAACACGTGCG 59.089 50.000 17.22 4.30 0.00 5.34
651 655 1.651631 GTGGTCAAACAAAACACGTGC 59.348 47.619 17.22 0.00 0.00 5.34
652 656 2.659279 GTGTGGTCAAACAAAACACGTG 59.341 45.455 15.48 15.48 34.93 4.49
653 657 2.936316 GTGTGGTCAAACAAAACACGT 58.064 42.857 0.00 0.00 34.93 4.49
655 659 2.659279 CACGTGTGGTCAAACAAAACAC 59.341 45.455 7.58 0.00 38.18 3.32
656 660 2.351835 CCACGTGTGGTCAAACAAAACA 60.352 45.455 15.65 0.00 45.53 2.83
657 661 2.255316 CCACGTGTGGTCAAACAAAAC 58.745 47.619 15.65 0.00 45.53 2.43
658 662 2.638556 CCACGTGTGGTCAAACAAAA 57.361 45.000 15.65 0.00 45.53 2.44
669 673 1.734477 CTCTTCGAGCCCACGTGTG 60.734 63.158 15.65 3.72 34.70 3.82
670 674 2.651361 CTCTTCGAGCCCACGTGT 59.349 61.111 15.65 0.00 34.70 4.49
671 675 2.125912 CCTCTTCGAGCCCACGTG 60.126 66.667 9.08 9.08 34.70 4.49
672 676 3.382832 CCCTCTTCGAGCCCACGT 61.383 66.667 0.00 0.00 34.70 4.49
673 677 3.068691 TCCCTCTTCGAGCCCACG 61.069 66.667 0.00 0.00 0.00 4.94
674 678 1.827399 TTGTCCCTCTTCGAGCCCAC 61.827 60.000 0.00 0.00 0.00 4.61
675 679 1.125093 TTTGTCCCTCTTCGAGCCCA 61.125 55.000 0.00 0.00 0.00 5.36
676 680 0.253327 ATTTGTCCCTCTTCGAGCCC 59.747 55.000 0.00 0.00 0.00 5.19
677 681 1.657822 GATTTGTCCCTCTTCGAGCC 58.342 55.000 0.00 0.00 0.00 4.70
678 682 1.281899 CGATTTGTCCCTCTTCGAGC 58.718 55.000 0.00 0.00 31.74 5.03
679 683 2.094700 TCACGATTTGTCCCTCTTCGAG 60.095 50.000 0.00 0.00 34.15 4.04
680 684 1.890489 TCACGATTTGTCCCTCTTCGA 59.110 47.619 0.00 0.00 34.15 3.71
681 685 2.263077 CTCACGATTTGTCCCTCTTCG 58.737 52.381 0.00 0.00 35.99 3.79
682 686 2.003301 GCTCACGATTTGTCCCTCTTC 58.997 52.381 0.00 0.00 0.00 2.87
683 687 1.625818 AGCTCACGATTTGTCCCTCTT 59.374 47.619 0.00 0.00 0.00 2.85
684 688 1.270907 AGCTCACGATTTGTCCCTCT 58.729 50.000 0.00 0.00 0.00 3.69
685 689 2.100605 AAGCTCACGATTTGTCCCTC 57.899 50.000 0.00 0.00 0.00 4.30
686 690 2.568623 AAAGCTCACGATTTGTCCCT 57.431 45.000 0.00 0.00 0.00 4.20
687 691 4.965119 ATAAAAGCTCACGATTTGTCCC 57.035 40.909 0.00 0.00 0.00 4.46
688 692 5.095490 CCAATAAAAGCTCACGATTTGTCC 58.905 41.667 0.00 0.00 0.00 4.02
689 693 4.558860 GCCAATAAAAGCTCACGATTTGTC 59.441 41.667 0.00 0.00 0.00 3.18
690 694 4.022416 TGCCAATAAAAGCTCACGATTTGT 60.022 37.500 0.00 0.00 0.00 2.83
691 695 4.484236 TGCCAATAAAAGCTCACGATTTG 58.516 39.130 0.00 0.00 0.00 2.32
692 696 4.782019 TGCCAATAAAAGCTCACGATTT 57.218 36.364 0.00 0.00 0.00 2.17
693 697 4.782019 TTGCCAATAAAAGCTCACGATT 57.218 36.364 0.00 0.00 0.00 3.34
694 698 4.782019 TTTGCCAATAAAAGCTCACGAT 57.218 36.364 0.00 0.00 0.00 3.73
695 699 4.576216 TTTTGCCAATAAAAGCTCACGA 57.424 36.364 0.00 0.00 0.00 4.35
696 700 5.844301 ATTTTTGCCAATAAAAGCTCACG 57.156 34.783 0.00 0.00 31.80 4.35
697 701 8.532977 TCTTATTTTTGCCAATAAAAGCTCAC 57.467 30.769 0.00 0.00 31.80 3.51
741 745 8.474577 CGATGCTATTAAAGAAATGCAAATGTC 58.525 33.333 0.00 0.00 36.15 3.06
772 776 9.541143 CAAGCCCTAAAAACAATAGAAAAGAAA 57.459 29.630 0.00 0.00 0.00 2.52
780 784 7.396540 AGTGATCAAGCCCTAAAAACAATAG 57.603 36.000 0.00 0.00 0.00 1.73
822 826 0.621571 TCCTATGCTCTGCCTTGGGT 60.622 55.000 0.00 0.00 0.00 4.51
856 860 3.153919 TGTTCCTCCAGTTGGCATAAAC 58.846 45.455 0.00 0.00 34.44 2.01
876 880 3.367703 GGAATTCATGGTCCTTGTGCTTG 60.368 47.826 7.93 0.00 0.00 4.01
941 945 5.071115 AGCCTGGCCTTGTTGTAATTAAAAA 59.929 36.000 16.57 0.00 0.00 1.94
962 966 2.901249 TCGGAGTAAGTTATGCAAGCC 58.099 47.619 0.00 0.00 0.00 4.35
970 974 6.267471 TCTTTACCACCTTTCGGAGTAAGTTA 59.733 38.462 0.00 0.00 35.53 2.24
981 985 5.355350 CCTCATGATGTCTTTACCACCTTTC 59.645 44.000 0.00 0.00 0.00 2.62
989 993 6.206634 TGGTTTTGTCCTCATGATGTCTTTAC 59.793 38.462 0.00 0.00 0.00 2.01
1033 1037 4.036852 ACAGTTTGCTCCAGCTAGAAAAAC 59.963 41.667 10.32 10.32 42.66 2.43
1040 1044 2.928801 TTCACAGTTTGCTCCAGCTA 57.071 45.000 0.00 0.00 42.66 3.32
1042 1046 1.881973 TGATTCACAGTTTGCTCCAGC 59.118 47.619 0.00 0.00 42.50 4.85
1204 1208 7.484035 TCAAAATGTTGGGGAAAATTTTACG 57.516 32.000 7.06 0.00 35.29 3.18
1263 1267 8.965819 TCTTTGCAATTTTATAGCACCTCAATA 58.034 29.630 0.00 0.00 38.11 1.90
1287 1291 3.525199 ACCTCATTACCTCAAAGCCATCT 59.475 43.478 0.00 0.00 0.00 2.90
1298 1302 2.231478 CACGTGTCTCACCTCATTACCT 59.769 50.000 7.58 0.00 0.00 3.08
1299 1303 2.230508 TCACGTGTCTCACCTCATTACC 59.769 50.000 16.51 0.00 0.00 2.85
1300 1304 3.570926 TCACGTGTCTCACCTCATTAC 57.429 47.619 16.51 0.00 0.00 1.89
1301 1305 4.556233 CTTTCACGTGTCTCACCTCATTA 58.444 43.478 16.51 0.00 0.00 1.90
1302 1306 3.393800 CTTTCACGTGTCTCACCTCATT 58.606 45.455 16.51 0.00 0.00 2.57
1303 1307 2.289072 CCTTTCACGTGTCTCACCTCAT 60.289 50.000 16.51 0.00 0.00 2.90
1304 1308 1.068588 CCTTTCACGTGTCTCACCTCA 59.931 52.381 16.51 0.00 0.00 3.86
1305 1309 1.605712 CCCTTTCACGTGTCTCACCTC 60.606 57.143 16.51 0.00 0.00 3.85
1343 1348 6.881602 GTGTAGTTCCTCCTTTCAAGATTCAT 59.118 38.462 0.00 0.00 0.00 2.57
1514 1519 2.693074 GCCAACTTTCCACTCCTTGAAA 59.307 45.455 0.00 0.00 0.00 2.69
1524 1529 2.834549 TCAAAAACAGGCCAACTTTCCA 59.165 40.909 5.01 0.00 0.00 3.53
1525 1530 3.535280 TCAAAAACAGGCCAACTTTCC 57.465 42.857 5.01 0.00 0.00 3.13
1542 1547 2.305927 GCCATAGGCCTAGGCTTATCAA 59.694 50.000 30.16 11.69 44.06 2.57
1600 1605 7.365473 CCTCTTCTTTCCTCCTATCATTGTTCT 60.365 40.741 0.00 0.00 0.00 3.01
1642 1648 4.584325 AGCCATGTTTGCTCAACTTCTTAA 59.416 37.500 0.00 0.00 36.21 1.85
1774 1780 6.075984 AGTACCTCTGTTTCTCTCTGGTTTA 58.924 40.000 0.00 0.00 0.00 2.01
1778 1784 4.097286 GCTAGTACCTCTGTTTCTCTCTGG 59.903 50.000 0.00 0.00 0.00 3.86
1804 1810 2.158813 AGAGAAAAACAGAGCAACGGGA 60.159 45.455 0.00 0.00 0.00 5.14
1806 1812 4.058817 AGTAGAGAAAAACAGAGCAACGG 58.941 43.478 0.00 0.00 0.00 4.44
1808 1814 7.472543 TGAAAAGTAGAGAAAAACAGAGCAAC 58.527 34.615 0.00 0.00 0.00 4.17
1809 1815 7.624360 TGAAAAGTAGAGAAAAACAGAGCAA 57.376 32.000 0.00 0.00 0.00 3.91
1810 1816 7.336931 AGTTGAAAAGTAGAGAAAAACAGAGCA 59.663 33.333 0.00 0.00 0.00 4.26
1811 1817 7.698628 AGTTGAAAAGTAGAGAAAAACAGAGC 58.301 34.615 0.00 0.00 0.00 4.09
1826 1832 8.617290 AGTCGGATTTTACATAGTTGAAAAGT 57.383 30.769 0.00 0.00 0.00 2.66
1848 1854 9.232473 AGTTGGAAATTAGAGGAAATACAAGTC 57.768 33.333 0.00 0.00 0.00 3.01
1869 1875 6.320672 AGAGGAATGAAGAAATGCATAGTTGG 59.679 38.462 0.00 0.00 0.00 3.77
1914 1920 6.005583 TGTTCTTTTTGATGCATCAGTCTC 57.994 37.500 27.25 15.72 38.19 3.36
1934 1940 1.339291 GCTCTTGCTGCTTTTCCTGTT 59.661 47.619 0.00 0.00 36.03 3.16
1936 1942 3.788775 GCTCTTGCTGCTTTTCCTG 57.211 52.632 0.00 0.00 36.03 3.86
1981 1987 1.277557 CTCTTGCTGGTGCTCCTACTT 59.722 52.381 6.34 0.00 40.48 2.24
1984 1990 1.903877 GCCTCTTGCTGGTGCTCCTA 61.904 60.000 6.34 0.00 40.48 2.94
1988 1994 4.357279 GGGCCTCTTGCTGGTGCT 62.357 66.667 0.84 0.00 40.92 4.40
1989 1995 4.666253 TGGGCCTCTTGCTGGTGC 62.666 66.667 4.53 0.00 40.92 5.01
1990 1996 2.115910 TTGGGCCTCTTGCTGGTG 59.884 61.111 4.53 0.00 40.92 4.17
1991 1997 2.116125 GTTGGGCCTCTTGCTGGT 59.884 61.111 4.53 0.00 40.92 4.00
1992 1998 1.530013 CTTGTTGGGCCTCTTGCTGG 61.530 60.000 4.53 0.00 40.92 4.85
1993 1999 1.962144 CTTGTTGGGCCTCTTGCTG 59.038 57.895 4.53 0.00 40.92 4.41
1994 2000 1.905354 GCTTGTTGGGCCTCTTGCT 60.905 57.895 4.53 0.00 40.92 3.91
1995 2001 1.871126 GAGCTTGTTGGGCCTCTTGC 61.871 60.000 4.53 2.95 40.16 4.01
1996 2002 0.538057 TGAGCTTGTTGGGCCTCTTG 60.538 55.000 4.53 0.00 0.00 3.02
1997 2003 0.538287 GTGAGCTTGTTGGGCCTCTT 60.538 55.000 4.53 0.00 0.00 2.85
1998 2004 1.073897 GTGAGCTTGTTGGGCCTCT 59.926 57.895 4.53 0.00 0.00 3.69
1999 2005 0.823356 TTGTGAGCTTGTTGGGCCTC 60.823 55.000 4.53 0.00 0.00 4.70
2000 2006 0.825010 CTTGTGAGCTTGTTGGGCCT 60.825 55.000 4.53 0.00 0.00 5.19
2001 2007 1.662044 CTTGTGAGCTTGTTGGGCC 59.338 57.895 0.00 0.00 0.00 5.80
2002 2008 1.006922 GCTTGTGAGCTTGTTGGGC 60.007 57.895 0.00 0.00 45.65 5.36
2012 2018 3.217626 ACCTCTTTTTGGAGCTTGTGAG 58.782 45.455 0.00 0.00 32.43 3.51
2013 2019 3.214328 GACCTCTTTTTGGAGCTTGTGA 58.786 45.455 0.00 0.00 32.43 3.58
2014 2020 2.294512 GGACCTCTTTTTGGAGCTTGTG 59.705 50.000 0.00 0.00 32.43 3.33
2015 2021 2.587522 GGACCTCTTTTTGGAGCTTGT 58.412 47.619 0.00 0.00 32.43 3.16
2016 2022 1.537202 CGGACCTCTTTTTGGAGCTTG 59.463 52.381 0.00 0.00 32.43 4.01
2017 2023 1.545651 CCGGACCTCTTTTTGGAGCTT 60.546 52.381 0.00 0.00 32.43 3.74
2018 2024 0.036875 CCGGACCTCTTTTTGGAGCT 59.963 55.000 0.00 0.00 32.43 4.09
2019 2025 1.587043 GCCGGACCTCTTTTTGGAGC 61.587 60.000 5.05 0.00 32.43 4.70
2020 2026 0.250727 TGCCGGACCTCTTTTTGGAG 60.251 55.000 5.05 0.00 0.00 3.86
2021 2027 0.183971 TTGCCGGACCTCTTTTTGGA 59.816 50.000 5.05 0.00 0.00 3.53
2022 2028 0.598065 CTTGCCGGACCTCTTTTTGG 59.402 55.000 5.05 0.00 0.00 3.28
2023 2029 0.039165 GCTTGCCGGACCTCTTTTTG 60.039 55.000 5.05 0.00 0.00 2.44
2024 2030 0.178990 AGCTTGCCGGACCTCTTTTT 60.179 50.000 5.05 0.00 0.00 1.94
2025 2031 0.606673 GAGCTTGCCGGACCTCTTTT 60.607 55.000 5.05 0.00 0.00 2.27
2026 2032 1.003233 GAGCTTGCCGGACCTCTTT 60.003 57.895 5.05 0.00 0.00 2.52
2027 2033 2.217038 TGAGCTTGCCGGACCTCTT 61.217 57.895 5.05 0.00 0.00 2.85
2028 2034 2.604686 TGAGCTTGCCGGACCTCT 60.605 61.111 5.05 0.00 0.00 3.69
2029 2035 2.435059 GTGAGCTTGCCGGACCTC 60.435 66.667 5.05 4.81 0.00 3.85
2030 2036 2.738213 CTTGTGAGCTTGCCGGACCT 62.738 60.000 5.05 0.00 0.00 3.85
2031 2037 2.281484 TTGTGAGCTTGCCGGACC 60.281 61.111 5.05 0.00 0.00 4.46
2032 2038 0.674895 ATCTTGTGAGCTTGCCGGAC 60.675 55.000 5.05 0.00 0.00 4.79
2033 2039 0.674581 CATCTTGTGAGCTTGCCGGA 60.675 55.000 5.05 0.00 0.00 5.14
2034 2040 1.798735 CATCTTGTGAGCTTGCCGG 59.201 57.895 0.00 0.00 0.00 6.13
2035 2041 1.136147 GCATCTTGTGAGCTTGCCG 59.864 57.895 0.00 0.00 0.00 5.69
2036 2042 0.599558 TTGCATCTTGTGAGCTTGCC 59.400 50.000 2.05 0.00 33.44 4.52
2037 2043 1.268899 ACTTGCATCTTGTGAGCTTGC 59.731 47.619 0.00 0.00 34.36 4.01
2038 2044 3.425892 GCTACTTGCATCTTGTGAGCTTG 60.426 47.826 0.00 0.00 42.31 4.01
2039 2045 2.746362 GCTACTTGCATCTTGTGAGCTT 59.254 45.455 0.00 0.00 42.31 3.74
2040 2046 2.027377 AGCTACTTGCATCTTGTGAGCT 60.027 45.455 0.00 0.00 45.94 4.09
2041 2047 2.351111 GAGCTACTTGCATCTTGTGAGC 59.649 50.000 0.00 0.00 45.94 4.26
2042 2048 3.859443 AGAGCTACTTGCATCTTGTGAG 58.141 45.455 0.00 0.00 45.94 3.51
2043 2049 3.259123 TGAGAGCTACTTGCATCTTGTGA 59.741 43.478 0.00 0.00 45.94 3.58
2044 2050 3.593096 TGAGAGCTACTTGCATCTTGTG 58.407 45.455 0.00 0.00 45.94 3.33
2045 2051 3.969287 TGAGAGCTACTTGCATCTTGT 57.031 42.857 0.00 0.00 45.94 3.16
2046 2052 5.814764 ATTTGAGAGCTACTTGCATCTTG 57.185 39.130 0.00 0.00 45.94 3.02
2047 2053 5.392811 GCAATTTGAGAGCTACTTGCATCTT 60.393 40.000 0.00 0.00 45.94 2.40
2048 2054 4.096081 GCAATTTGAGAGCTACTTGCATCT 59.904 41.667 0.00 0.00 45.94 2.90
2049 2055 4.142534 TGCAATTTGAGAGCTACTTGCATC 60.143 41.667 7.63 0.00 42.69 3.91
2050 2056 3.760151 TGCAATTTGAGAGCTACTTGCAT 59.240 39.130 7.63 0.00 42.69 3.96
2051 2057 3.148412 TGCAATTTGAGAGCTACTTGCA 58.852 40.909 7.63 7.63 44.61 4.08
2052 2058 3.756069 CTGCAATTTGAGAGCTACTTGC 58.244 45.455 0.00 3.11 39.43 4.01
2053 2059 3.189910 TGCTGCAATTTGAGAGCTACTTG 59.810 43.478 16.99 0.00 32.41 3.16
2054 2060 3.415212 TGCTGCAATTTGAGAGCTACTT 58.585 40.909 16.99 0.00 32.41 2.24
2055 2061 3.063510 TGCTGCAATTTGAGAGCTACT 57.936 42.857 16.99 0.00 32.41 2.57
2056 2062 3.376234 TGATGCTGCAATTTGAGAGCTAC 59.624 43.478 6.36 12.60 32.41 3.58
2057 2063 3.613030 TGATGCTGCAATTTGAGAGCTA 58.387 40.909 6.36 8.10 32.41 3.32
2058 2064 2.443416 TGATGCTGCAATTTGAGAGCT 58.557 42.857 6.36 0.00 32.41 4.09
2059 2065 2.933495 TGATGCTGCAATTTGAGAGC 57.067 45.000 6.36 11.84 0.00 4.09
2060 2066 4.696899 TCTTGATGCTGCAATTTGAGAG 57.303 40.909 6.36 0.00 0.00 3.20
2061 2067 5.184287 TGAATCTTGATGCTGCAATTTGAGA 59.816 36.000 6.36 6.72 0.00 3.27
2062 2068 5.407502 TGAATCTTGATGCTGCAATTTGAG 58.592 37.500 6.36 1.09 0.00 3.02
2063 2069 5.394224 TGAATCTTGATGCTGCAATTTGA 57.606 34.783 6.36 3.84 0.00 2.69
2064 2070 6.474819 TTTGAATCTTGATGCTGCAATTTG 57.525 33.333 6.36 0.00 0.00 2.32
2065 2071 5.121768 GCTTTGAATCTTGATGCTGCAATTT 59.878 36.000 6.36 0.00 0.00 1.82
2066 2072 4.630069 GCTTTGAATCTTGATGCTGCAATT 59.370 37.500 6.36 0.63 0.00 2.32
2067 2073 4.081642 AGCTTTGAATCTTGATGCTGCAAT 60.082 37.500 6.36 0.00 0.00 3.56
2068 2074 3.257375 AGCTTTGAATCTTGATGCTGCAA 59.743 39.130 6.36 0.00 0.00 4.08
2069 2075 2.823747 AGCTTTGAATCTTGATGCTGCA 59.176 40.909 4.13 4.13 0.00 4.41
2070 2076 3.436496 GAGCTTTGAATCTTGATGCTGC 58.564 45.455 0.00 0.00 0.00 5.25
2071 2077 3.695060 AGGAGCTTTGAATCTTGATGCTG 59.305 43.478 0.00 0.00 0.00 4.41
2072 2078 3.965694 AGGAGCTTTGAATCTTGATGCT 58.034 40.909 0.00 0.00 0.00 3.79
2073 2079 5.121811 TCTAGGAGCTTTGAATCTTGATGC 58.878 41.667 0.00 0.00 0.00 3.91
2074 2080 6.258287 CACTCTAGGAGCTTTGAATCTTGATG 59.742 42.308 0.00 0.00 32.04 3.07
2075 2081 6.155910 TCACTCTAGGAGCTTTGAATCTTGAT 59.844 38.462 0.00 0.00 32.04 2.57
2076 2082 5.481824 TCACTCTAGGAGCTTTGAATCTTGA 59.518 40.000 0.00 0.00 32.04 3.02
2077 2083 5.580297 GTCACTCTAGGAGCTTTGAATCTTG 59.420 44.000 0.00 0.00 32.04 3.02
2078 2084 5.247110 TGTCACTCTAGGAGCTTTGAATCTT 59.753 40.000 0.00 0.00 32.04 2.40
2079 2085 4.774726 TGTCACTCTAGGAGCTTTGAATCT 59.225 41.667 0.00 0.00 32.04 2.40
2080 2086 5.078411 TGTCACTCTAGGAGCTTTGAATC 57.922 43.478 0.00 0.00 32.04 2.52
2081 2087 5.221722 TGTTGTCACTCTAGGAGCTTTGAAT 60.222 40.000 0.00 0.00 32.04 2.57
2082 2088 4.100963 TGTTGTCACTCTAGGAGCTTTGAA 59.899 41.667 0.00 0.00 32.04 2.69
2083 2089 3.641436 TGTTGTCACTCTAGGAGCTTTGA 59.359 43.478 0.00 0.00 32.04 2.69
2084 2090 3.995199 TGTTGTCACTCTAGGAGCTTTG 58.005 45.455 0.00 0.00 32.04 2.77
2085 2091 4.636249 CTTGTTGTCACTCTAGGAGCTTT 58.364 43.478 0.00 0.00 32.04 3.51
2086 2092 3.556004 GCTTGTTGTCACTCTAGGAGCTT 60.556 47.826 0.00 0.00 32.04 3.74
2087 2093 2.028567 GCTTGTTGTCACTCTAGGAGCT 60.029 50.000 0.00 0.00 32.04 4.09
2088 2094 2.289072 TGCTTGTTGTCACTCTAGGAGC 60.289 50.000 0.00 0.00 32.04 4.70
2089 2095 3.243873 TGTGCTTGTTGTCACTCTAGGAG 60.244 47.826 0.00 0.00 34.49 3.69
2090 2096 2.698274 TGTGCTTGTTGTCACTCTAGGA 59.302 45.455 0.00 0.00 34.49 2.94
2091 2097 3.111853 TGTGCTTGTTGTCACTCTAGG 57.888 47.619 0.00 0.00 34.49 3.02
2092 2098 5.468072 AGATTTGTGCTTGTTGTCACTCTAG 59.532 40.000 0.00 0.00 34.49 2.43
2093 2099 5.368145 AGATTTGTGCTTGTTGTCACTCTA 58.632 37.500 0.00 0.00 34.49 2.43
2094 2100 4.202441 AGATTTGTGCTTGTTGTCACTCT 58.798 39.130 0.00 0.00 34.49 3.24
2095 2101 4.558538 AGATTTGTGCTTGTTGTCACTC 57.441 40.909 0.00 0.00 34.49 3.51
2096 2102 4.398988 TCAAGATTTGTGCTTGTTGTCACT 59.601 37.500 0.00 0.00 42.49 3.41
2097 2103 4.671377 TCAAGATTTGTGCTTGTTGTCAC 58.329 39.130 0.00 0.00 42.49 3.67
2098 2104 4.202040 CCTCAAGATTTGTGCTTGTTGTCA 60.202 41.667 0.00 0.00 42.49 3.58
2099 2105 4.293415 CCTCAAGATTTGTGCTTGTTGTC 58.707 43.478 0.00 0.00 42.49 3.18
2100 2106 3.068590 CCCTCAAGATTTGTGCTTGTTGT 59.931 43.478 0.00 0.00 42.49 3.32
2101 2107 3.318839 TCCCTCAAGATTTGTGCTTGTTG 59.681 43.478 0.00 0.00 42.49 3.33
2102 2108 3.565307 TCCCTCAAGATTTGTGCTTGTT 58.435 40.909 0.00 0.00 42.49 2.83
2103 2109 3.228188 TCCCTCAAGATTTGTGCTTGT 57.772 42.857 0.00 0.00 42.49 3.16
2104 2110 3.613432 GCTTCCCTCAAGATTTGTGCTTG 60.613 47.826 0.00 0.00 43.09 4.01
2105 2111 2.560105 GCTTCCCTCAAGATTTGTGCTT 59.440 45.455 0.00 0.00 33.29 3.91
2106 2112 2.165998 GCTTCCCTCAAGATTTGTGCT 58.834 47.619 0.00 0.00 33.29 4.40
2107 2113 1.888512 TGCTTCCCTCAAGATTTGTGC 59.111 47.619 0.00 0.00 33.29 4.57
2108 2114 2.886523 TGTGCTTCCCTCAAGATTTGTG 59.113 45.455 0.00 0.00 33.29 3.33
2109 2115 3.228188 TGTGCTTCCCTCAAGATTTGT 57.772 42.857 0.00 0.00 33.29 2.83
2110 2116 4.015084 AGATGTGCTTCCCTCAAGATTTG 58.985 43.478 0.00 0.00 33.29 2.32
2111 2117 4.015084 CAGATGTGCTTCCCTCAAGATTT 58.985 43.478 0.00 0.00 33.29 2.17
2112 2118 3.618351 CAGATGTGCTTCCCTCAAGATT 58.382 45.455 0.00 0.00 33.29 2.40
2113 2119 3.278668 CAGATGTGCTTCCCTCAAGAT 57.721 47.619 0.00 0.00 33.29 2.40
2114 2120 2.775911 CAGATGTGCTTCCCTCAAGA 57.224 50.000 0.00 0.00 33.29 3.02
2126 2132 0.907486 TTCCTCTCCCTGCAGATGTG 59.093 55.000 17.39 7.10 0.00 3.21
2127 2133 0.908198 GTTCCTCTCCCTGCAGATGT 59.092 55.000 17.39 0.00 0.00 3.06
2128 2134 0.907486 TGTTCCTCTCCCTGCAGATG 59.093 55.000 17.39 6.04 0.00 2.90
2129 2135 1.558756 CTTGTTCCTCTCCCTGCAGAT 59.441 52.381 17.39 0.00 0.00 2.90
2130 2136 0.979665 CTTGTTCCTCTCCCTGCAGA 59.020 55.000 17.39 0.00 0.00 4.26
2131 2137 0.035630 CCTTGTTCCTCTCCCTGCAG 60.036 60.000 6.78 6.78 0.00 4.41
2132 2138 0.473694 TCCTTGTTCCTCTCCCTGCA 60.474 55.000 0.00 0.00 0.00 4.41
2133 2139 0.251634 CTCCTTGTTCCTCTCCCTGC 59.748 60.000 0.00 0.00 0.00 4.85
2134 2140 1.830477 CTCTCCTTGTTCCTCTCCCTG 59.170 57.143 0.00 0.00 0.00 4.45
2135 2141 1.273552 CCTCTCCTTGTTCCTCTCCCT 60.274 57.143 0.00 0.00 0.00 4.20
2136 2142 1.199615 CCTCTCCTTGTTCCTCTCCC 58.800 60.000 0.00 0.00 0.00 4.30
2137 2143 2.107366 CTCCTCTCCTTGTTCCTCTCC 58.893 57.143 0.00 0.00 0.00 3.71
2138 2144 1.480545 GCTCCTCTCCTTGTTCCTCTC 59.519 57.143 0.00 0.00 0.00 3.20
2139 2145 1.203237 TGCTCCTCTCCTTGTTCCTCT 60.203 52.381 0.00 0.00 0.00 3.69
2140 2146 1.206849 CTGCTCCTCTCCTTGTTCCTC 59.793 57.143 0.00 0.00 0.00 3.71
2141 2147 1.274712 CTGCTCCTCTCCTTGTTCCT 58.725 55.000 0.00 0.00 0.00 3.36
2142 2148 0.251634 CCTGCTCCTCTCCTTGTTCC 59.748 60.000 0.00 0.00 0.00 3.62
2143 2149 0.251634 CCCTGCTCCTCTCCTTGTTC 59.748 60.000 0.00 0.00 0.00 3.18
2144 2150 0.178891 TCCCTGCTCCTCTCCTTGTT 60.179 55.000 0.00 0.00 0.00 2.83
2145 2151 0.907230 GTCCCTGCTCCTCTCCTTGT 60.907 60.000 0.00 0.00 0.00 3.16
2146 2152 0.906756 TGTCCCTGCTCCTCTCCTTG 60.907 60.000 0.00 0.00 0.00 3.61
2147 2153 0.043940 ATGTCCCTGCTCCTCTCCTT 59.956 55.000 0.00 0.00 0.00 3.36
2148 2154 0.690411 CATGTCCCTGCTCCTCTCCT 60.690 60.000 0.00 0.00 0.00 3.69
2149 2155 0.689080 TCATGTCCCTGCTCCTCTCC 60.689 60.000 0.00 0.00 0.00 3.71
2150 2156 0.752054 CTCATGTCCCTGCTCCTCTC 59.248 60.000 0.00 0.00 0.00 3.20
2151 2157 1.336632 GCTCATGTCCCTGCTCCTCT 61.337 60.000 0.00 0.00 0.00 3.69
2152 2158 1.145819 GCTCATGTCCCTGCTCCTC 59.854 63.158 0.00 0.00 0.00 3.71
2153 2159 1.614525 TGCTCATGTCCCTGCTCCT 60.615 57.895 0.00 0.00 0.00 3.69
2154 2160 1.153208 CTGCTCATGTCCCTGCTCC 60.153 63.158 0.00 0.00 0.00 4.70
2155 2161 1.153208 CCTGCTCATGTCCCTGCTC 60.153 63.158 0.00 0.00 0.00 4.26
2156 2162 1.203441 TTCCTGCTCATGTCCCTGCT 61.203 55.000 0.00 0.00 0.00 4.24
2157 2163 0.747283 CTTCCTGCTCATGTCCCTGC 60.747 60.000 0.00 0.00 0.00 4.85
2158 2164 0.907486 TCTTCCTGCTCATGTCCCTG 59.093 55.000 0.00 0.00 0.00 4.45
2159 2165 1.202330 CTCTTCCTGCTCATGTCCCT 58.798 55.000 0.00 0.00 0.00 4.20
2160 2166 0.179936 CCTCTTCCTGCTCATGTCCC 59.820 60.000 0.00 0.00 0.00 4.46
2161 2167 1.134551 GTCCTCTTCCTGCTCATGTCC 60.135 57.143 0.00 0.00 0.00 4.02
2162 2168 1.134551 GGTCCTCTTCCTGCTCATGTC 60.135 57.143 0.00 0.00 0.00 3.06
2163 2169 0.908198 GGTCCTCTTCCTGCTCATGT 59.092 55.000 0.00 0.00 0.00 3.21
2164 2170 0.907486 TGGTCCTCTTCCTGCTCATG 59.093 55.000 0.00 0.00 0.00 3.07
2165 2171 1.202330 CTGGTCCTCTTCCTGCTCAT 58.798 55.000 0.00 0.00 0.00 2.90
2166 2172 1.548357 GCTGGTCCTCTTCCTGCTCA 61.548 60.000 6.58 0.00 43.37 4.26
2167 2173 1.220477 GCTGGTCCTCTTCCTGCTC 59.780 63.158 6.58 0.00 43.37 4.26
2168 2174 1.130054 TTGCTGGTCCTCTTCCTGCT 61.130 55.000 13.17 0.00 45.68 4.24
2169 2175 0.957888 GTTGCTGGTCCTCTTCCTGC 60.958 60.000 6.83 6.83 45.68 4.85
2170 2176 0.397941 TGTTGCTGGTCCTCTTCCTG 59.602 55.000 0.00 0.00 0.00 3.86
2171 2177 1.280421 GATGTTGCTGGTCCTCTTCCT 59.720 52.381 0.00 0.00 0.00 3.36
2172 2178 1.003580 TGATGTTGCTGGTCCTCTTCC 59.996 52.381 0.00 0.00 0.00 3.46
2173 2179 2.354259 CTGATGTTGCTGGTCCTCTTC 58.646 52.381 0.00 0.00 0.00 2.87
2174 2180 1.004044 CCTGATGTTGCTGGTCCTCTT 59.996 52.381 0.00 0.00 0.00 2.85
2175 2181 0.617413 CCTGATGTTGCTGGTCCTCT 59.383 55.000 0.00 0.00 0.00 3.69
2176 2182 0.393537 CCCTGATGTTGCTGGTCCTC 60.394 60.000 0.00 0.00 0.00 3.71
2177 2183 1.136329 ACCCTGATGTTGCTGGTCCT 61.136 55.000 0.00 0.00 0.00 3.85
2178 2184 0.962356 CACCCTGATGTTGCTGGTCC 60.962 60.000 0.00 0.00 0.00 4.46
2179 2185 0.962356 CCACCCTGATGTTGCTGGTC 60.962 60.000 0.00 0.00 0.00 4.02
2180 2186 1.075482 CCACCCTGATGTTGCTGGT 59.925 57.895 0.00 0.00 0.00 4.00
2181 2187 0.033796 ATCCACCCTGATGTTGCTGG 60.034 55.000 0.00 0.00 0.00 4.85
2182 2188 1.100510 CATCCACCCTGATGTTGCTG 58.899 55.000 0.00 0.00 37.85 4.41
2183 2189 0.033796 CCATCCACCCTGATGTTGCT 60.034 55.000 0.00 0.00 40.43 3.91
2184 2190 1.039233 CCCATCCACCCTGATGTTGC 61.039 60.000 0.00 0.00 40.43 4.17
2185 2191 0.625316 TCCCATCCACCCTGATGTTG 59.375 55.000 0.00 0.00 40.43 3.33
2186 2192 1.612035 ATCCCATCCACCCTGATGTT 58.388 50.000 0.00 0.00 40.43 2.71
2187 2193 2.057922 GTATCCCATCCACCCTGATGT 58.942 52.381 0.00 0.00 40.43 3.06
2188 2194 2.342659 AGTATCCCATCCACCCTGATG 58.657 52.381 0.00 0.00 41.47 3.07
2189 2195 2.823460 AGTATCCCATCCACCCTGAT 57.177 50.000 0.00 0.00 0.00 2.90
2190 2196 2.587060 AAGTATCCCATCCACCCTGA 57.413 50.000 0.00 0.00 0.00 3.86
2191 2197 3.669939 AAAAGTATCCCATCCACCCTG 57.330 47.619 0.00 0.00 0.00 4.45
2214 2220 1.068610 TCTTTAGCAATTGCCACGTGC 60.069 47.619 26.45 6.53 43.38 5.34
2215 2221 2.987413 TCTTTAGCAATTGCCACGTG 57.013 45.000 26.45 9.08 43.38 4.49
2216 2222 2.819608 ACATCTTTAGCAATTGCCACGT 59.180 40.909 26.45 10.90 43.38 4.49
2217 2223 3.492421 ACATCTTTAGCAATTGCCACG 57.508 42.857 26.45 11.60 43.38 4.94
2218 2224 5.120674 GGAAAACATCTTTAGCAATTGCCAC 59.879 40.000 26.45 0.00 43.38 5.01
2219 2225 5.221601 TGGAAAACATCTTTAGCAATTGCCA 60.222 36.000 26.45 11.15 43.38 4.92
2220 2226 5.237048 TGGAAAACATCTTTAGCAATTGCC 58.763 37.500 26.45 9.18 43.38 4.52
2221 2227 6.424812 AGTTGGAAAACATCTTTAGCAATTGC 59.575 34.615 23.05 23.05 42.49 3.56
2222 2228 7.951530 AGTTGGAAAACATCTTTAGCAATTG 57.048 32.000 0.00 0.00 0.00 2.32
2224 2230 9.643693 CATTAGTTGGAAAACATCTTTAGCAAT 57.356 29.630 0.00 0.00 31.74 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.