Multiple sequence alignment - TraesCS2B01G497500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G497500 chr2B 100.000 8531 0 0 1 8531 694061937 694053407 0.000000e+00 15754.0
1 TraesCS2B01G497500 chr2D 92.247 7120 300 132 572 7550 577159385 577152377 0.000000e+00 9858.0
2 TraesCS2B01G497500 chr2D 89.439 748 33 20 7800 8528 577152399 577151679 0.000000e+00 902.0
3 TraesCS2B01G497500 chr2D 93.243 518 31 3 1 517 577159904 577159390 0.000000e+00 760.0
4 TraesCS2B01G497500 chr2A 91.679 3509 157 81 1 3406 715344525 715341049 0.000000e+00 4737.0
5 TraesCS2B01G497500 chr2A 93.153 3257 133 48 4327 7545 715340088 715336884 0.000000e+00 4697.0
6 TraesCS2B01G497500 chr2A 90.323 744 44 12 7800 8531 715336902 715336175 0.000000e+00 950.0
7 TraesCS2B01G497500 chr2A 87.273 715 36 18 3532 4224 715340875 715340194 0.000000e+00 765.0
8 TraesCS2B01G497500 chr2A 100.000 42 0 0 7761 7802 715336699 715336658 2.550000e-10 78.7
9 TraesCS2B01G497500 chr7A 86.752 234 29 2 4734 4966 436696046 436696278 8.500000e-65 259.0
10 TraesCS2B01G497500 chr7A 83.088 272 46 0 5990 6261 436697131 436697402 1.840000e-61 248.0
11 TraesCS2B01G497500 chr7A 76.211 454 82 19 5451 5882 436696658 436697107 5.190000e-52 217.0
12 TraesCS2B01G497500 chr7A 86.508 126 14 3 4105 4228 436695809 436695933 1.490000e-27 135.0
13 TraesCS2B01G497500 chr7A 93.182 44 2 1 7216 7259 436698531 436698573 7.150000e-06 63.9
14 TraesCS2B01G497500 chr7B 86.325 234 30 2 4734 4966 381826317 381826549 3.950000e-63 254.0
15 TraesCS2B01G497500 chr7B 82.625 259 45 0 6003 6261 381827418 381827676 6.660000e-56 230.0
16 TraesCS2B01G497500 chr7B 75.877 456 83 19 5451 5882 381826929 381827381 3.120000e-49 207.0
17 TraesCS2B01G497500 chr7B 86.508 126 14 3 4105 4228 381826104 381826228 1.490000e-27 135.0
18 TraesCS2B01G497500 chr7B 93.182 44 2 1 7216 7259 381828806 381828848 7.150000e-06 63.9
19 TraesCS2B01G497500 chr7D 76.600 453 82 17 5451 5882 386728209 386728658 2.400000e-55 228.0
20 TraesCS2B01G497500 chr7D 81.618 272 50 0 5990 6261 386728682 386728953 8.620000e-55 226.0
21 TraesCS2B01G497500 chr7D 86.508 126 14 3 4105 4228 386727362 386727486 1.490000e-27 135.0
22 TraesCS2B01G497500 chr7D 97.222 36 0 1 7224 7259 386730094 386730128 9.250000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G497500 chr2B 694053407 694061937 8530 True 15754.00 15754 100.0000 1 8531 1 chr2B.!!$R1 8530
1 TraesCS2B01G497500 chr2D 577151679 577159904 8225 True 3840.00 9858 91.6430 1 8528 3 chr2D.!!$R1 8527
2 TraesCS2B01G497500 chr2A 715336175 715344525 8350 True 2245.54 4737 92.4856 1 8531 5 chr2A.!!$R1 8530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
449 454 0.251916 TATGGCACCCAAGGAACTCG 59.748 55.0 0.00 0.00 38.49 4.18 F
1132 1155 0.232303 CCGAACTTTGTCTCACGCAC 59.768 55.0 0.00 0.00 0.00 5.34 F
1828 1862 0.521291 TTTGCAAGTACCGATGCTGC 59.479 50.0 14.60 0.00 42.97 5.25 F
2146 2184 0.645496 TCCAGCTATAGGTTGGGGGA 59.355 55.0 15.77 11.01 44.92 4.81 F
3427 3554 0.323908 TCATTTTACCCAAGGGCCGG 60.324 55.0 4.70 0.00 39.32 6.13 F
3952 4190 0.600782 CTTGGCGTTTTGGCTGCAAT 60.601 50.0 0.50 0.00 45.14 3.56 F
4631 4954 0.165295 CATTGCAGTGTCAGCTCACG 59.835 55.0 0.13 0.00 42.40 4.35 F
6207 6555 0.108138 CAACCTCCTTCTGGCTACCG 60.108 60.0 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1441 1470 0.536233 CTCTCTGCCTCGCTAGCCTA 60.536 60.000 9.66 0.0 0.00 3.93 R
2434 2502 0.897621 GGGGTGGAATGGAAAAGCTG 59.102 55.000 0.00 0.0 0.00 4.24 R
2691 2761 2.356794 CGAAGTTAAGGTCGTCCGC 58.643 57.895 0.00 0.0 39.05 5.54 R
3934 4172 0.676184 TATTGCAGCCAAAACGCCAA 59.324 45.000 0.00 0.0 34.05 4.52 R
4276 4559 0.316841 GCCGGCACCAAATTTCTCAA 59.683 50.000 24.80 0.0 0.00 3.02 R
5432 5763 0.095245 CGCGTACTGGTTCTGCATTG 59.905 55.000 0.00 0.0 0.00 2.82 R
6529 6893 0.035317 TTCGAGTTGGTGCTCTGCAT 59.965 50.000 0.00 0.0 41.91 3.96 R
7788 8155 0.245539 CCACATTGAAAGGGCAGCAG 59.754 55.000 0.00 0.0 0.00 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
168 172 7.261325 TCAACTTCGATTTGAATTTTGGTTGA 58.739 30.769 11.52 11.52 41.02 3.18
169 173 7.434897 TCAACTTCGATTTGAATTTTGGTTGAG 59.565 33.333 11.52 0.00 39.67 3.02
292 297 9.129209 CACACACGTGGAATAGATATATACAAG 57.871 37.037 21.57 0.00 39.64 3.16
313 318 8.986477 ACAAGTCAATAGGAAATGTTTAATGC 57.014 30.769 0.00 0.00 0.00 3.56
318 323 7.545265 GTCAATAGGAAATGTTTAATGCAGCAA 59.455 33.333 0.00 0.00 0.00 3.91
350 355 6.610830 TCATGTTATTTATGGCACCCAAGAAT 59.389 34.615 0.00 0.00 36.95 2.40
358 363 1.821136 GGCACCCAAGAATCTCCAAAG 59.179 52.381 0.00 0.00 0.00 2.77
365 370 5.014544 ACCCAAGAATCTCCAAAGAAGATCA 59.985 40.000 0.00 0.00 34.49 2.92
367 372 6.039493 CCCAAGAATCTCCAAAGAAGATCATG 59.961 42.308 0.00 0.00 34.49 3.07
446 451 2.243810 TGTTTATGGCACCCAAGGAAC 58.756 47.619 0.00 0.00 36.95 3.62
449 454 0.251916 TATGGCACCCAAGGAACTCG 59.748 55.000 0.00 0.00 38.49 4.18
546 551 3.560481 CACTCTGCTTGCATGGAATAGAG 59.440 47.826 25.96 25.96 36.98 2.43
548 553 2.773661 TCTGCTTGCATGGAATAGAGGA 59.226 45.455 0.00 0.00 0.00 3.71
555 560 6.514048 GCTTGCATGGAATAGAGGATACAAAC 60.514 42.308 0.00 0.00 41.41 2.93
560 565 7.446625 GCATGGAATAGAGGATACAAACTCATT 59.553 37.037 0.00 0.00 41.41 2.57
563 568 8.141909 TGGAATAGAGGATACAAACTCATTACG 58.858 37.037 0.00 0.00 41.41 3.18
569 574 7.011482 AGAGGATACAAACTCATTACGAAATGC 59.989 37.037 0.00 0.00 40.24 3.56
602 611 6.954852 CACAATTAAACATTTTGCTTATGGCG 59.045 34.615 0.00 0.00 45.43 5.69
617 626 2.512896 GCGCCCAAGGATCTCCAT 59.487 61.111 0.00 0.00 38.89 3.41
628 637 7.465116 CCCAAGGATCTCCATACAATATCTTT 58.535 38.462 0.00 0.00 38.89 2.52
682 691 3.370061 CACATCGTATATCGCCGAGAGTA 59.630 47.826 0.00 0.00 39.67 2.59
683 692 3.999001 ACATCGTATATCGCCGAGAGTAA 59.001 43.478 0.00 0.00 39.67 2.24
721 730 4.659115 TGCTTGCATGCAATAGAGGATAT 58.341 39.130 31.96 0.00 40.29 1.63
723 732 6.420638 TGCTTGCATGCAATAGAGGATATAT 58.579 36.000 31.96 0.00 40.29 0.86
726 735 7.496920 GCTTGCATGCAATAGAGGATATATACA 59.503 37.037 31.96 5.09 35.20 2.29
727 736 9.387257 CTTGCATGCAATAGAGGATATATACAA 57.613 33.333 31.96 4.73 35.20 2.41
729 738 9.166173 TGCATGCAATAGAGGATATATACAAAC 57.834 33.333 20.30 0.00 0.00 2.93
730 739 9.388506 GCATGCAATAGAGGATATATACAAACT 57.611 33.333 14.21 0.00 0.00 2.66
843 854 1.342555 TCGCCGAGTGAAAATACACG 58.657 50.000 0.00 0.00 44.35 4.49
853 871 2.032117 TGAAAATACACGCACACTGCTG 60.032 45.455 0.00 0.00 42.25 4.41
855 873 0.603707 AATACACGCACACTGCTGCT 60.604 50.000 0.00 0.00 42.25 4.24
860 878 3.360340 GCACACTGCTGCTCCCAC 61.360 66.667 0.00 0.00 40.96 4.61
861 879 2.111669 CACACTGCTGCTCCCACA 59.888 61.111 0.00 0.00 0.00 4.17
917 939 1.299541 CCCTAGCAATTGCACTACGG 58.700 55.000 30.89 20.73 45.16 4.02
1132 1155 0.232303 CCGAACTTTGTCTCACGCAC 59.768 55.000 0.00 0.00 0.00 5.34
1149 1172 1.737363 GCACCGCAACTCCTTCTAGAG 60.737 57.143 0.00 0.00 39.91 2.43
1335 1358 9.111613 CCATATATAGGACTGTACTAGCACTAC 57.888 40.741 5.88 0.00 0.00 2.73
1441 1470 2.159142 CGCTAGGGTTTCGGTGTTAGAT 60.159 50.000 0.00 0.00 0.00 1.98
1450 1479 1.878088 TCGGTGTTAGATAGGCTAGCG 59.122 52.381 9.00 0.05 33.43 4.26
1551 1583 1.483827 GGATCCTCATCAGCACTGTCA 59.516 52.381 3.84 0.00 0.00 3.58
1605 1638 7.174946 TCCAGAAAGTTTAATTTCGAGCTGAAT 59.825 33.333 0.00 0.00 42.73 2.57
1618 1651 5.668471 TCGAGCTGAATGAAATCTTGAGAT 58.332 37.500 0.00 0.00 36.07 2.75
1636 1669 5.160641 TGAGATTTGGCTTAATTTTGCGTC 58.839 37.500 0.00 0.00 0.00 5.19
1656 1689 4.142687 CGTCTATTGCTTCCATTTCCGTTT 60.143 41.667 0.00 0.00 0.00 3.60
1661 1694 3.976169 TGCTTCCATTTCCGTTTTCTTG 58.024 40.909 0.00 0.00 0.00 3.02
1662 1695 3.243704 TGCTTCCATTTCCGTTTTCTTGG 60.244 43.478 0.00 0.00 0.00 3.61
1681 1715 5.301805 TCTTGGTTTGGAAAGAAAGATCACC 59.698 40.000 0.00 0.00 29.59 4.02
1763 1797 4.466567 TGTTTTGACTTGCATGTACTCG 57.533 40.909 5.05 0.00 0.00 4.18
1820 1854 6.977213 TCCTTTGTTTCTATTTGCAAGTACC 58.023 36.000 0.00 0.00 0.00 3.34
1826 1860 4.137116 TCTATTTGCAAGTACCGATGCT 57.863 40.909 14.60 1.10 42.97 3.79
1828 1862 0.521291 TTTGCAAGTACCGATGCTGC 59.479 50.000 14.60 0.00 42.97 5.25
1830 1864 2.472909 GCAAGTACCGATGCTGCCC 61.473 63.158 8.25 0.00 39.46 5.36
1927 1961 7.445945 AGTACTCCTTGATTTGCATATAGGAC 58.554 38.462 4.95 0.00 0.00 3.85
1995 2029 2.826488 TCCTTGGGAAGAGAGAGAAGG 58.174 52.381 0.00 0.00 32.74 3.46
2128 2166 5.066764 ACGGAGCAGATAAAGAAGACTACTC 59.933 44.000 0.00 0.00 0.00 2.59
2146 2184 0.645496 TCCAGCTATAGGTTGGGGGA 59.355 55.000 15.77 11.01 44.92 4.81
2147 2185 1.059913 CCAGCTATAGGTTGGGGGAG 58.940 60.000 0.55 0.00 41.76 4.30
2148 2186 1.414538 CCAGCTATAGGTTGGGGGAGA 60.415 57.143 0.55 0.00 41.76 3.71
2353 2413 7.002816 CAATCTTGCTTTCACATCTCTAGAC 57.997 40.000 0.00 0.00 0.00 2.59
2376 2439 9.676861 AGACAGAAAATGAGACATCAATAATCA 57.323 29.630 0.00 0.00 39.39 2.57
2380 2443 8.910944 AGAAAATGAGACATCAATAATCAAGGG 58.089 33.333 0.00 0.00 39.39 3.95
2382 2445 8.461249 AAATGAGACATCAATAATCAAGGGAG 57.539 34.615 0.00 0.00 39.39 4.30
2383 2446 6.813293 TGAGACATCAATAATCAAGGGAGA 57.187 37.500 0.00 0.00 30.61 3.71
2421 2485 1.424638 TCTCCCTTGATCCCCGATTC 58.575 55.000 0.00 0.00 0.00 2.52
2434 2502 1.865340 CCCGATTCGTAGCTTTTAGCC 59.135 52.381 5.20 0.00 43.77 3.93
2506 2575 2.017049 CCTCCCCAAACGAATTAGCAG 58.983 52.381 0.00 0.00 0.00 4.24
2509 2578 2.241176 TCCCCAAACGAATTAGCAGGAT 59.759 45.455 0.00 0.00 0.00 3.24
2648 2718 3.241995 GCGACTTGCTACTTCGTAATTGG 60.242 47.826 0.00 0.00 41.73 3.16
2708 2778 2.746997 GGCGGACGACCTTAACTTC 58.253 57.895 1.72 0.00 0.00 3.01
3061 3145 8.117813 TCTCCTCCACATTTTGTTAATTTACC 57.882 34.615 0.00 0.00 0.00 2.85
3062 3146 7.726291 TCTCCTCCACATTTTGTTAATTTACCA 59.274 33.333 0.00 0.00 0.00 3.25
3063 3147 7.662897 TCCTCCACATTTTGTTAATTTACCAC 58.337 34.615 0.00 0.00 0.00 4.16
3064 3148 7.507616 TCCTCCACATTTTGTTAATTTACCACT 59.492 33.333 0.00 0.00 0.00 4.00
3065 3149 7.598493 CCTCCACATTTTGTTAATTTACCACTG 59.402 37.037 0.00 0.00 0.00 3.66
3069 3153 9.737427 CACATTTTGTTAATTTACCACTGTGTA 57.263 29.630 7.08 0.00 0.00 2.90
3125 3215 8.999220 TCATATCAAGTGCTCATTCATATCTC 57.001 34.615 0.00 0.00 0.00 2.75
3151 3241 5.767665 TGCTACTCCTTAATTTGTGCTCAAA 59.232 36.000 15.63 15.63 45.71 2.69
3164 3254 5.689383 TGTGCTCAAATCCTTCTTGTTAC 57.311 39.130 0.00 0.00 0.00 2.50
3235 3329 6.821031 ATACGTTGATATACACTCTCCCTC 57.179 41.667 0.00 0.00 0.00 4.30
3318 3432 7.294676 ACTTTTGTGTTCAATTCTTTCTTGC 57.705 32.000 0.00 0.00 33.32 4.01
3324 3438 7.362662 TGTGTTCAATTCTTTCTTGCTGTATC 58.637 34.615 0.00 0.00 0.00 2.24
3325 3439 7.229306 TGTGTTCAATTCTTTCTTGCTGTATCT 59.771 33.333 0.00 0.00 0.00 1.98
3333 3447 8.484641 TTCTTTCTTGCTGTATCTATGTCTTG 57.515 34.615 0.00 0.00 0.00 3.02
3367 3481 7.014518 TGTTATCCATCCCTGCTTAAATGAATG 59.985 37.037 0.00 0.00 0.00 2.67
3380 3500 8.795513 TGCTTAAATGAATGAATTCTCACTTGA 58.204 29.630 7.05 0.00 37.67 3.02
3423 3550 3.773560 TGTCCTTCATTTTACCCAAGGG 58.226 45.455 2.91 2.91 36.75 3.95
3424 3551 2.496070 GTCCTTCATTTTACCCAAGGGC 59.504 50.000 4.70 0.00 36.75 5.19
3425 3552 1.831106 CCTTCATTTTACCCAAGGGCC 59.169 52.381 4.70 0.00 39.32 5.80
3426 3553 1.476488 CTTCATTTTACCCAAGGGCCG 59.524 52.381 4.70 0.00 39.32 6.13
3427 3554 0.323908 TCATTTTACCCAAGGGCCGG 60.324 55.000 4.70 0.00 39.32 6.13
3441 3568 2.303022 AGGGCCGGATGAATACATACAG 59.697 50.000 5.05 0.00 37.20 2.74
3485 3612 8.706492 TCATTTATTTGCTTGCTATTGAAAGG 57.294 30.769 0.00 0.00 29.41 3.11
3486 3613 7.765360 TCATTTATTTGCTTGCTATTGAAAGGG 59.235 33.333 0.00 0.00 29.41 3.95
3512 3639 1.624813 ACAAGCACCAATTCCCAATGG 59.375 47.619 0.00 0.00 42.60 3.16
3515 3642 2.836667 AGCACCAATTCCCAATGGATT 58.163 42.857 0.00 0.00 41.40 3.01
3520 3647 5.396660 GCACCAATTCCCAATGGATTAATGT 60.397 40.000 0.00 0.00 41.40 2.71
3523 3650 7.611079 CACCAATTCCCAATGGATTAATGTTTT 59.389 33.333 0.00 0.00 41.40 2.43
3528 3655 6.887013 TCCCAATGGATTAATGTTTTCCATG 58.113 36.000 0.00 3.94 46.93 3.66
3550 3763 7.861372 CCATGCATTGTTCTAGAGATTTCAATC 59.139 37.037 0.00 0.00 35.64 2.67
3679 3902 2.644299 TGGAACTGGATGGATGAGTGTT 59.356 45.455 0.00 0.00 0.00 3.32
3747 3970 3.470645 AGTAGTGTGGAGTGGACAAAC 57.529 47.619 0.00 0.00 0.00 2.93
3748 3971 3.039011 AGTAGTGTGGAGTGGACAAACT 58.961 45.455 0.00 0.00 39.61 2.66
3798 4025 3.262448 TAAGTTGACCGGGCCTGGC 62.262 63.158 31.77 22.74 0.00 4.85
3902 4139 1.202325 ACGCGTTCACAGTTCACACTA 60.202 47.619 5.58 0.00 0.00 2.74
3921 4158 1.170919 ACTGCTGCTGCTGGACTTTG 61.171 55.000 22.83 0.00 41.57 2.77
3952 4190 0.600782 CTTGGCGTTTTGGCTGCAAT 60.601 50.000 0.50 0.00 45.14 3.56
3986 4224 2.831366 GCATGCATGGCTCGTGGAG 61.831 63.158 27.34 0.00 0.00 3.86
3997 4235 6.017440 GCATGGCTCGTGGAGTTTTATATTAA 60.017 38.462 0.00 0.00 31.39 1.40
3998 4236 7.468084 GCATGGCTCGTGGAGTTTTATATTAAA 60.468 37.037 0.00 0.00 31.39 1.52
4074 4313 9.225436 TGTGTATGTATTGATGTGTATTTGTGT 57.775 29.630 0.00 0.00 0.00 3.72
4075 4314 9.489393 GTGTATGTATTGATGTGTATTTGTGTG 57.511 33.333 0.00 0.00 0.00 3.82
4079 4318 7.358830 TGTATTGATGTGTATTTGTGTGTGTG 58.641 34.615 0.00 0.00 0.00 3.82
4080 4319 5.826601 TTGATGTGTATTTGTGTGTGTGT 57.173 34.783 0.00 0.00 0.00 3.72
4081 4320 5.167218 TGATGTGTATTTGTGTGTGTGTG 57.833 39.130 0.00 0.00 0.00 3.82
4082 4321 4.637977 TGATGTGTATTTGTGTGTGTGTGT 59.362 37.500 0.00 0.00 0.00 3.72
4083 4322 4.348198 TGTGTATTTGTGTGTGTGTGTG 57.652 40.909 0.00 0.00 0.00 3.82
4087 4326 2.695613 TTTGTGTGTGTGTGTGTGTG 57.304 45.000 0.00 0.00 0.00 3.82
4270 4553 2.237143 TCTTCACCATTTCGGCTGAGAT 59.763 45.455 0.00 0.00 39.03 2.75
4271 4554 2.028420 TCACCATTTCGGCTGAGATG 57.972 50.000 17.21 17.21 39.03 2.90
4276 4559 0.620556 ATTTCGGCTGAGATGGGTGT 59.379 50.000 0.00 0.00 0.00 4.16
4279 4562 1.191489 TCGGCTGAGATGGGTGTTGA 61.191 55.000 0.00 0.00 0.00 3.18
4280 4563 0.742281 CGGCTGAGATGGGTGTTGAG 60.742 60.000 0.00 0.00 0.00 3.02
4281 4564 0.615331 GGCTGAGATGGGTGTTGAGA 59.385 55.000 0.00 0.00 0.00 3.27
4282 4565 1.003580 GGCTGAGATGGGTGTTGAGAA 59.996 52.381 0.00 0.00 0.00 2.87
4283 4566 2.553028 GGCTGAGATGGGTGTTGAGAAA 60.553 50.000 0.00 0.00 0.00 2.52
4284 4567 3.350833 GCTGAGATGGGTGTTGAGAAAT 58.649 45.455 0.00 0.00 0.00 2.17
4285 4568 3.760684 GCTGAGATGGGTGTTGAGAAATT 59.239 43.478 0.00 0.00 0.00 1.82
4286 4569 4.219288 GCTGAGATGGGTGTTGAGAAATTT 59.781 41.667 0.00 0.00 0.00 1.82
4287 4570 5.706916 CTGAGATGGGTGTTGAGAAATTTG 58.293 41.667 0.00 0.00 0.00 2.32
4288 4571 4.523943 TGAGATGGGTGTTGAGAAATTTGG 59.476 41.667 0.00 0.00 0.00 3.28
4289 4572 4.482990 AGATGGGTGTTGAGAAATTTGGT 58.517 39.130 0.00 0.00 0.00 3.67
4295 4578 0.316841 TTGAGAAATTTGGTGCCGGC 59.683 50.000 22.73 22.73 0.00 6.13
4296 4579 1.215382 GAGAAATTTGGTGCCGGCC 59.785 57.895 26.77 15.53 0.00 6.13
4297 4580 2.126110 GAAATTTGGTGCCGGCCG 60.126 61.111 26.77 21.04 0.00 6.13
4311 4594 0.530870 CGGCCGGAAAGAAGAGATCC 60.531 60.000 20.10 0.00 0.00 3.36
4312 4595 0.179043 GGCCGGAAAGAAGAGATCCC 60.179 60.000 5.05 0.00 0.00 3.85
4462 4755 4.996434 ACACGCTGGCAGTCAGGC 62.996 66.667 17.16 0.31 43.54 4.85
4508 4812 3.190849 CACACTGCCCGATGCTCG 61.191 66.667 0.00 0.00 42.00 5.03
4603 4921 3.445687 CATGCATGCACCGCCAGT 61.446 61.111 25.37 1.29 0.00 4.00
4631 4954 0.165295 CATTGCAGTGTCAGCTCACG 59.835 55.000 0.13 0.00 42.40 4.35
4632 4955 0.952497 ATTGCAGTGTCAGCTCACGG 60.952 55.000 1.99 1.99 42.40 4.94
4654 4977 3.382546 GCTCACCCATCTGTAAATGCAAT 59.617 43.478 0.00 0.00 0.00 3.56
4659 4982 4.527816 ACCCATCTGTAAATGCAATGTGTT 59.472 37.500 0.00 0.00 0.00 3.32
4660 4983 5.011943 ACCCATCTGTAAATGCAATGTGTTT 59.988 36.000 0.00 0.00 0.00 2.83
4661 4984 5.349270 CCCATCTGTAAATGCAATGTGTTTG 59.651 40.000 0.00 0.00 38.43 2.93
4662 4985 5.349270 CCATCTGTAAATGCAATGTGTTTGG 59.651 40.000 0.00 0.00 35.75 3.28
4663 4986 5.781210 TCTGTAAATGCAATGTGTTTGGA 57.219 34.783 0.00 0.00 40.21 3.53
4664 4987 6.154203 TCTGTAAATGCAATGTGTTTGGAA 57.846 33.333 0.00 0.00 39.28 3.53
4665 4988 6.215121 TCTGTAAATGCAATGTGTTTGGAAG 58.785 36.000 0.00 0.00 39.28 3.46
4666 4989 6.040278 TCTGTAAATGCAATGTGTTTGGAAGA 59.960 34.615 0.00 0.00 39.28 2.87
4667 4990 6.757237 TGTAAATGCAATGTGTTTGGAAGAT 58.243 32.000 0.00 0.00 39.28 2.40
4668 4991 6.645827 TGTAAATGCAATGTGTTTGGAAGATG 59.354 34.615 0.00 0.00 39.28 2.90
4669 4992 4.877378 ATGCAATGTGTTTGGAAGATGT 57.123 36.364 0.00 0.00 39.28 3.06
4670 4993 4.669206 TGCAATGTGTTTGGAAGATGTT 57.331 36.364 0.00 0.00 35.75 2.71
4671 4994 5.021033 TGCAATGTGTTTGGAAGATGTTT 57.979 34.783 0.00 0.00 35.75 2.83
4672 4995 6.154203 TGCAATGTGTTTGGAAGATGTTTA 57.846 33.333 0.00 0.00 35.75 2.01
4673 4996 6.757237 TGCAATGTGTTTGGAAGATGTTTAT 58.243 32.000 0.00 0.00 35.75 1.40
4674 4997 7.890515 TGCAATGTGTTTGGAAGATGTTTATA 58.109 30.769 0.00 0.00 35.75 0.98
4675 4998 8.028354 TGCAATGTGTTTGGAAGATGTTTATAG 58.972 33.333 0.00 0.00 35.75 1.31
4676 4999 8.028938 GCAATGTGTTTGGAAGATGTTTATAGT 58.971 33.333 0.00 0.00 35.75 2.12
4679 5002 9.959721 ATGTGTTTGGAAGATGTTTATAGTAGT 57.040 29.630 0.00 0.00 0.00 2.73
4728 5054 1.662629 GTTGGTGCTGACTGATGATCG 59.337 52.381 0.00 0.00 0.00 3.69
4794 5124 2.127609 GACAACGACAAGCTGCGC 60.128 61.111 0.00 0.00 0.00 6.09
5283 5613 4.841617 TCTGAGGCCTCCCGCGAT 62.842 66.667 29.95 0.00 38.94 4.58
5348 5678 3.603532 TCATGGACGTCGTAAGTACTCT 58.396 45.455 9.92 0.00 39.48 3.24
5349 5679 3.620374 TCATGGACGTCGTAAGTACTCTC 59.380 47.826 9.92 0.00 39.48 3.20
5353 5683 3.425492 GGACGTCGTAAGTACTCTCAACC 60.425 52.174 9.92 0.00 39.48 3.77
5357 5687 3.128415 GTCGTAAGTACTCTCAACCCTCC 59.872 52.174 0.00 0.00 39.48 4.30
5372 5703 5.488919 TCAACCCTCCTTGATCATTTCTACT 59.511 40.000 0.00 0.00 0.00 2.57
5374 5705 5.995446 ACCCTCCTTGATCATTTCTACTTC 58.005 41.667 0.00 0.00 0.00 3.01
5378 5709 7.613411 CCCTCCTTGATCATTTCTACTTCTTTT 59.387 37.037 0.00 0.00 0.00 2.27
5379 5710 9.018582 CCTCCTTGATCATTTCTACTTCTTTTT 57.981 33.333 0.00 0.00 0.00 1.94
5427 5758 7.471721 CACTGATGTTCAACTTCACTTTTGTA 58.528 34.615 2.00 0.00 30.47 2.41
5432 5763 6.033341 TGTTCAACTTCACTTTTGTATGTGC 58.967 36.000 0.00 0.00 34.49 4.57
5799 6134 0.324943 ACATCTACAAGCCGCTGGTT 59.675 50.000 5.53 0.00 0.00 3.67
5951 6290 1.260033 GCATAGTTCATCTGCTCGTGC 59.740 52.381 1.71 1.71 40.20 5.34
5953 6292 3.796844 GCATAGTTCATCTGCTCGTGCTA 60.797 47.826 11.19 0.00 40.48 3.49
5954 6293 2.285827 AGTTCATCTGCTCGTGCTAC 57.714 50.000 11.19 0.28 40.48 3.58
5955 6294 1.821753 AGTTCATCTGCTCGTGCTACT 59.178 47.619 11.19 2.39 40.48 2.57
5958 6297 4.098654 AGTTCATCTGCTCGTGCTACTTAT 59.901 41.667 11.19 0.00 40.48 1.73
5966 6313 5.716094 TGCTCGTGCTACTTATTAACAGAA 58.284 37.500 11.19 0.00 40.48 3.02
5971 6318 5.498700 CGTGCTACTTATTAACAGAAGTGCG 60.499 44.000 8.72 5.59 36.58 5.34
5997 6345 0.806868 CCATGTGTGCAGTGATCACC 59.193 55.000 22.21 8.64 33.71 4.02
6030 6378 0.733729 GGAAGAGCATGCTGAAGCTG 59.266 55.000 28.27 1.17 42.04 4.24
6057 6405 2.437359 ATGGTGGCGAGCTTCTGC 60.437 61.111 0.00 0.00 40.05 4.26
6183 6531 2.505982 CCGGGCATCGTCCTCAAT 59.494 61.111 0.00 0.00 37.11 2.57
6186 6534 1.153086 GGGCATCGTCCTCAATGCT 60.153 57.895 7.21 0.00 45.95 3.79
6189 6537 1.371337 GCATCGTCCTCAATGCTGCA 61.371 55.000 4.13 4.13 43.87 4.41
6204 6552 0.615331 CTGCAACCTCCTTCTGGCTA 59.385 55.000 0.00 0.00 0.00 3.93
6207 6555 0.108138 CAACCTCCTTCTGGCTACCG 60.108 60.000 0.00 0.00 0.00 4.02
6213 6561 3.072468 TTCTGGCTACCGGTCCCG 61.072 66.667 12.40 3.42 39.44 5.14
6237 6585 1.136147 GCGCGTCTTCGACTTCCTA 59.864 57.895 8.43 0.00 39.71 2.94
6292 6640 8.718734 ACACATCATCTATCATGAAAATGATCG 58.281 33.333 19.82 17.07 41.20 3.69
6300 6648 5.327616 TCATGAAAATGATCGTTGCCAAT 57.672 34.783 0.00 0.00 0.00 3.16
6384 6740 2.514592 AATGGCGGCATCGTCCAG 60.515 61.111 25.97 0.00 42.45 3.86
6496 6852 5.448496 GCAATAATAACCTCATGCGTGTGAA 60.448 40.000 9.53 0.00 0.00 3.18
6500 6856 2.995466 ACCTCATGCGTGTGAAAATG 57.005 45.000 9.53 0.00 0.00 2.32
6546 6910 1.945387 ATATGCAGAGCACCAACTCG 58.055 50.000 0.00 0.00 43.04 4.18
6591 6955 4.724602 GAGAGCTGCACGGACGCA 62.725 66.667 1.02 0.00 40.32 5.24
6630 6994 4.460683 GCGCCGGTGGATGTGGTA 62.461 66.667 18.41 0.00 0.00 3.25
6675 7039 2.396955 CGACCCAGACTACGTCGCT 61.397 63.158 9.72 0.00 42.37 4.93
6898 7262 2.189499 GCCGTCATCTCCAATGGCC 61.189 63.158 0.00 0.00 40.95 5.36
6986 7350 3.581755 CCTGCCATCAAAACTGTTCATG 58.418 45.455 0.00 0.00 0.00 3.07
7001 7365 5.050644 TGTTCATGAGAAATGCATGTGTC 57.949 39.130 7.07 7.07 42.77 3.67
7005 7369 1.271325 TGAGAAATGCATGTGTCGGGT 60.271 47.619 9.32 0.00 0.00 5.28
7023 7387 7.548075 GTGTCGGGTTTTTATCTGAATTCTCTA 59.452 37.037 7.05 0.00 0.00 2.43
7350 7717 6.289064 ACCGTAATTTTCTTCAGTCAGTCTT 58.711 36.000 0.00 0.00 0.00 3.01
7405 7772 3.206150 TGTTTCAGACTTCCAGTGCTTC 58.794 45.455 0.00 0.00 0.00 3.86
7529 7896 4.615949 TCCCAAAATTTGTGTTGTGATCG 58.384 39.130 4.92 0.00 0.00 3.69
7535 7902 2.967459 TTGTGTTGTGATCGATGTGC 57.033 45.000 0.54 0.00 0.00 4.57
7538 7905 1.129251 GTGTTGTGATCGATGTGCCTG 59.871 52.381 0.54 0.00 0.00 4.85
7539 7906 1.270785 TGTTGTGATCGATGTGCCTGT 60.271 47.619 0.54 0.00 0.00 4.00
7540 7907 1.394917 GTTGTGATCGATGTGCCTGTC 59.605 52.381 0.54 0.00 0.00 3.51
7541 7908 0.897621 TGTGATCGATGTGCCTGTCT 59.102 50.000 0.54 0.00 0.00 3.41
7543 7910 2.289631 TGTGATCGATGTGCCTGTCTTT 60.290 45.455 0.54 0.00 0.00 2.52
7544 7911 2.349886 GTGATCGATGTGCCTGTCTTTC 59.650 50.000 0.54 0.00 0.00 2.62
7545 7912 2.028203 TGATCGATGTGCCTGTCTTTCA 60.028 45.455 0.54 0.00 0.00 2.69
7546 7913 2.084610 TCGATGTGCCTGTCTTTCAG 57.915 50.000 0.00 0.00 43.27 3.02
7547 7914 0.445436 CGATGTGCCTGTCTTTCAGC 59.555 55.000 0.00 0.00 42.38 4.26
7548 7915 1.818642 GATGTGCCTGTCTTTCAGCT 58.181 50.000 0.00 0.00 42.38 4.24
7549 7916 2.157738 GATGTGCCTGTCTTTCAGCTT 58.842 47.619 0.00 0.00 42.38 3.74
7550 7917 1.311859 TGTGCCTGTCTTTCAGCTTG 58.688 50.000 0.00 0.00 42.38 4.01
7551 7918 1.312815 GTGCCTGTCTTTCAGCTTGT 58.687 50.000 0.00 0.00 42.38 3.16
7552 7919 1.002033 GTGCCTGTCTTTCAGCTTGTG 60.002 52.381 0.00 0.00 42.38 3.33
7553 7920 0.039708 GCCTGTCTTTCAGCTTGTGC 60.040 55.000 0.00 0.00 42.38 4.57
7576 7943 2.354199 GCATCTCTGCTTTAGTGAAGGC 59.646 50.000 0.00 0.00 45.32 4.35
7577 7944 3.603532 CATCTCTGCTTTAGTGAAGGCA 58.396 45.455 0.00 0.00 44.65 4.75
7578 7945 3.769739 TCTCTGCTTTAGTGAAGGCAA 57.230 42.857 0.00 0.00 45.92 4.52
7579 7946 4.085357 TCTCTGCTTTAGTGAAGGCAAA 57.915 40.909 0.00 0.00 45.92 3.68
7580 7947 4.655963 TCTCTGCTTTAGTGAAGGCAAAT 58.344 39.130 0.00 0.00 45.92 2.32
7581 7948 5.804639 TCTCTGCTTTAGTGAAGGCAAATA 58.195 37.500 0.00 0.00 45.92 1.40
7582 7949 6.418101 TCTCTGCTTTAGTGAAGGCAAATAT 58.582 36.000 0.00 0.00 45.92 1.28
7583 7950 6.886459 TCTCTGCTTTAGTGAAGGCAAATATT 59.114 34.615 0.00 0.00 45.92 1.28
7584 7951 8.046708 TCTCTGCTTTAGTGAAGGCAAATATTA 58.953 33.333 0.00 0.00 45.92 0.98
7585 7952 8.213518 TCTGCTTTAGTGAAGGCAAATATTAG 57.786 34.615 0.00 0.00 45.92 1.73
7586 7953 7.829211 TCTGCTTTAGTGAAGGCAAATATTAGT 59.171 33.333 0.00 0.00 45.92 2.24
7587 7954 8.348285 TGCTTTAGTGAAGGCAAATATTAGTT 57.652 30.769 0.00 0.00 43.96 2.24
7588 7955 9.456147 TGCTTTAGTGAAGGCAAATATTAGTTA 57.544 29.630 0.00 0.00 43.96 2.24
7594 7961 9.740710 AGTGAAGGCAAATATTAGTTAAGTTCT 57.259 29.630 0.00 0.00 0.00 3.01
7600 7967 9.290483 GGCAAATATTAGTTAAGTTCTTTCAGC 57.710 33.333 0.00 0.00 0.00 4.26
7606 7973 5.175090 AGTTAAGTTCTTTCAGCTTGTGC 57.825 39.130 0.00 0.00 40.05 4.57
7617 7984 2.169842 GCTTGTGCTCCTTCTCTGC 58.830 57.895 0.00 0.00 36.03 4.26
7618 7985 0.321475 GCTTGTGCTCCTTCTCTGCT 60.321 55.000 0.00 0.00 36.03 4.24
7619 7986 1.881498 GCTTGTGCTCCTTCTCTGCTT 60.881 52.381 0.00 0.00 36.03 3.91
7620 7987 2.075338 CTTGTGCTCCTTCTCTGCTTC 58.925 52.381 0.00 0.00 0.00 3.86
7621 7988 1.051008 TGTGCTCCTTCTCTGCTTCA 58.949 50.000 0.00 0.00 0.00 3.02
7622 7989 1.001746 TGTGCTCCTTCTCTGCTTCAG 59.998 52.381 0.00 0.00 0.00 3.02
7623 7990 1.001860 GTGCTCCTTCTCTGCTTCAGT 59.998 52.381 0.00 0.00 32.61 3.41
7624 7991 1.001746 TGCTCCTTCTCTGCTTCAGTG 59.998 52.381 0.00 0.00 32.61 3.66
7625 7992 1.274728 GCTCCTTCTCTGCTTCAGTGA 59.725 52.381 0.00 0.00 33.11 3.41
7626 7993 2.289320 GCTCCTTCTCTGCTTCAGTGAA 60.289 50.000 5.25 5.25 40.23 3.18
7629 7996 2.175878 TTCTCTGCTTCAGTGAAGGC 57.824 50.000 29.45 22.15 38.50 4.35
7630 7997 1.051008 TCTCTGCTTCAGTGAAGGCA 58.949 50.000 29.45 24.76 39.76 4.75
7631 7998 1.417517 TCTCTGCTTCAGTGAAGGCAA 59.582 47.619 29.45 17.35 39.76 4.52
7632 7999 2.158769 TCTCTGCTTCAGTGAAGGCAAA 60.159 45.455 29.45 16.06 39.76 3.68
7633 8000 2.818432 CTCTGCTTCAGTGAAGGCAAAT 59.182 45.455 29.45 0.00 39.76 2.32
7634 8001 4.005650 CTCTGCTTCAGTGAAGGCAAATA 58.994 43.478 29.45 15.88 39.76 1.40
7635 8002 4.592942 TCTGCTTCAGTGAAGGCAAATAT 58.407 39.130 29.45 0.00 39.76 1.28
7636 8003 5.012239 TCTGCTTCAGTGAAGGCAAATATT 58.988 37.500 29.45 0.00 39.76 1.28
7637 8004 6.179756 TCTGCTTCAGTGAAGGCAAATATTA 58.820 36.000 29.45 7.67 39.76 0.98
7638 8005 6.317140 TCTGCTTCAGTGAAGGCAAATATTAG 59.683 38.462 29.45 15.44 39.76 1.73
7639 8006 5.945784 TGCTTCAGTGAAGGCAAATATTAGT 59.054 36.000 29.45 0.00 39.76 2.24
7640 8007 6.434028 TGCTTCAGTGAAGGCAAATATTAGTT 59.566 34.615 29.45 0.00 39.76 2.24
7641 8008 6.969473 GCTTCAGTGAAGGCAAATATTAGTTC 59.031 38.462 29.45 8.03 39.76 3.01
7642 8009 7.391148 TTCAGTGAAGGCAAATATTAGTTCC 57.609 36.000 0.08 0.00 0.00 3.62
7643 8010 6.721318 TCAGTGAAGGCAAATATTAGTTCCT 58.279 36.000 0.00 0.00 0.00 3.36
7644 8011 6.599244 TCAGTGAAGGCAAATATTAGTTCCTG 59.401 38.462 0.00 1.43 0.00 3.86
7645 8012 6.599244 CAGTGAAGGCAAATATTAGTTCCTGA 59.401 38.462 0.00 0.00 0.00 3.86
7646 8013 7.121168 CAGTGAAGGCAAATATTAGTTCCTGAA 59.879 37.037 0.00 0.00 0.00 3.02
7647 8014 7.669722 AGTGAAGGCAAATATTAGTTCCTGAAA 59.330 33.333 0.00 0.00 0.00 2.69
7648 8015 7.970614 GTGAAGGCAAATATTAGTTCCTGAAAG 59.029 37.037 0.00 0.00 0.00 2.62
7660 8027 3.020102 CTGAAAGGCAATTTCCGCG 57.980 52.632 0.00 0.00 45.74 6.46
7661 8028 1.072666 CTGAAAGGCAATTTCCGCGC 61.073 55.000 0.00 0.00 45.74 6.86
7662 8029 1.212751 GAAAGGCAATTTCCGCGCT 59.787 52.632 5.56 0.00 41.32 5.92
7663 8030 0.798389 GAAAGGCAATTTCCGCGCTC 60.798 55.000 5.56 0.00 41.32 5.03
7664 8031 1.523154 AAAGGCAATTTCCGCGCTCA 61.523 50.000 5.56 0.00 0.00 4.26
7665 8032 1.523154 AAGGCAATTTCCGCGCTCAA 61.523 50.000 5.56 0.00 0.00 3.02
7666 8033 1.080839 GGCAATTTCCGCGCTCAAA 60.081 52.632 5.56 4.27 0.00 2.69
7667 8034 0.458370 GGCAATTTCCGCGCTCAAAT 60.458 50.000 5.56 6.72 0.00 2.32
7668 8035 1.202245 GGCAATTTCCGCGCTCAAATA 60.202 47.619 5.56 0.00 0.00 1.40
7669 8036 2.111756 GCAATTTCCGCGCTCAAATAG 58.888 47.619 5.56 0.00 0.00 1.73
7681 8048 2.715046 CTCAAATAGCCCAACTGAGCA 58.285 47.619 0.00 0.00 0.00 4.26
7682 8049 2.681848 CTCAAATAGCCCAACTGAGCAG 59.318 50.000 0.00 0.00 0.00 4.24
7683 8050 2.040278 TCAAATAGCCCAACTGAGCAGT 59.960 45.455 0.00 0.00 44.94 4.40
7697 8064 6.992063 ACTGAGCAGTTCTTTTGGTATATG 57.008 37.500 0.00 0.00 38.83 1.78
7698 8065 6.711277 ACTGAGCAGTTCTTTTGGTATATGA 58.289 36.000 0.00 0.00 38.83 2.15
7699 8066 7.341805 ACTGAGCAGTTCTTTTGGTATATGAT 58.658 34.615 0.00 0.00 38.83 2.45
7700 8067 7.831193 ACTGAGCAGTTCTTTTGGTATATGATT 59.169 33.333 0.00 0.00 38.83 2.57
7701 8068 7.988737 TGAGCAGTTCTTTTGGTATATGATTG 58.011 34.615 0.00 0.00 0.00 2.67
7702 8069 6.799512 AGCAGTTCTTTTGGTATATGATTGC 58.200 36.000 0.00 0.00 0.00 3.56
7703 8070 6.377996 AGCAGTTCTTTTGGTATATGATTGCA 59.622 34.615 0.00 0.00 0.00 4.08
7704 8071 6.694411 GCAGTTCTTTTGGTATATGATTGCAG 59.306 38.462 0.00 0.00 0.00 4.41
7705 8072 7.415541 GCAGTTCTTTTGGTATATGATTGCAGA 60.416 37.037 0.00 0.00 0.00 4.26
7706 8073 8.461222 CAGTTCTTTTGGTATATGATTGCAGAA 58.539 33.333 0.00 0.00 0.00 3.02
7707 8074 9.023962 AGTTCTTTTGGTATATGATTGCAGAAA 57.976 29.630 0.00 0.00 0.00 2.52
7708 8075 9.076596 GTTCTTTTGGTATATGATTGCAGAAAC 57.923 33.333 0.00 0.00 0.00 2.78
7709 8076 8.347004 TCTTTTGGTATATGATTGCAGAAACA 57.653 30.769 0.00 0.00 0.00 2.83
7710 8077 8.801299 TCTTTTGGTATATGATTGCAGAAACAA 58.199 29.630 0.00 0.00 0.00 2.83
7711 8078 9.590451 CTTTTGGTATATGATTGCAGAAACAAT 57.410 29.630 0.00 0.00 42.88 2.71
7712 8079 8.929827 TTTGGTATATGATTGCAGAAACAATG 57.070 30.769 0.00 0.00 40.31 2.82
7713 8080 7.878547 TGGTATATGATTGCAGAAACAATGA 57.121 32.000 0.00 0.00 40.31 2.57
7714 8081 7.933396 TGGTATATGATTGCAGAAACAATGAG 58.067 34.615 0.00 0.00 40.31 2.90
7715 8082 7.774625 TGGTATATGATTGCAGAAACAATGAGA 59.225 33.333 0.00 0.00 40.31 3.27
7716 8083 8.072567 GGTATATGATTGCAGAAACAATGAGAC 58.927 37.037 0.00 0.00 40.31 3.36
7717 8084 4.771590 TGATTGCAGAAACAATGAGACC 57.228 40.909 0.00 0.00 40.31 3.85
7718 8085 3.507233 TGATTGCAGAAACAATGAGACCC 59.493 43.478 0.00 0.00 40.31 4.46
7719 8086 1.909700 TGCAGAAACAATGAGACCCC 58.090 50.000 0.00 0.00 0.00 4.95
7720 8087 1.177401 GCAGAAACAATGAGACCCCC 58.823 55.000 0.00 0.00 0.00 5.40
7721 8088 1.547675 GCAGAAACAATGAGACCCCCA 60.548 52.381 0.00 0.00 0.00 4.96
7722 8089 2.875296 CAGAAACAATGAGACCCCCAA 58.125 47.619 0.00 0.00 0.00 4.12
7723 8090 3.434309 CAGAAACAATGAGACCCCCAAT 58.566 45.455 0.00 0.00 0.00 3.16
7724 8091 3.445096 CAGAAACAATGAGACCCCCAATC 59.555 47.826 0.00 0.00 0.00 2.67
7725 8092 3.075882 AGAAACAATGAGACCCCCAATCA 59.924 43.478 0.00 0.00 0.00 2.57
7726 8093 2.514458 ACAATGAGACCCCCAATCAC 57.486 50.000 0.00 0.00 0.00 3.06
7727 8094 1.710244 ACAATGAGACCCCCAATCACA 59.290 47.619 0.00 0.00 0.00 3.58
7728 8095 2.109834 ACAATGAGACCCCCAATCACAA 59.890 45.455 0.00 0.00 0.00 3.33
7729 8096 2.756760 CAATGAGACCCCCAATCACAAG 59.243 50.000 0.00 0.00 0.00 3.16
7730 8097 1.741028 TGAGACCCCCAATCACAAGA 58.259 50.000 0.00 0.00 0.00 3.02
7731 8098 2.061848 TGAGACCCCCAATCACAAGAA 58.938 47.619 0.00 0.00 0.00 2.52
7732 8099 2.224769 TGAGACCCCCAATCACAAGAAC 60.225 50.000 0.00 0.00 0.00 3.01
7733 8100 1.780309 AGACCCCCAATCACAAGAACA 59.220 47.619 0.00 0.00 0.00 3.18
7734 8101 2.162681 GACCCCCAATCACAAGAACAG 58.837 52.381 0.00 0.00 0.00 3.16
7735 8102 0.890683 CCCCCAATCACAAGAACAGC 59.109 55.000 0.00 0.00 0.00 4.40
7736 8103 1.548582 CCCCCAATCACAAGAACAGCT 60.549 52.381 0.00 0.00 0.00 4.24
7737 8104 2.242043 CCCCAATCACAAGAACAGCTT 58.758 47.619 0.00 0.00 37.29 3.74
7750 8117 6.360370 AAGAACAGCTTGTCCATTAGTAGA 57.640 37.500 0.00 0.00 34.93 2.59
7751 8118 6.552445 AGAACAGCTTGTCCATTAGTAGAT 57.448 37.500 0.00 0.00 0.00 1.98
7752 8119 6.344500 AGAACAGCTTGTCCATTAGTAGATG 58.656 40.000 0.00 0.00 0.00 2.90
7753 8120 5.683876 ACAGCTTGTCCATTAGTAGATGT 57.316 39.130 0.00 0.00 31.29 3.06
7754 8121 5.423015 ACAGCTTGTCCATTAGTAGATGTG 58.577 41.667 0.00 0.00 34.53 3.21
7755 8122 5.046304 ACAGCTTGTCCATTAGTAGATGTGT 60.046 40.000 0.00 0.00 34.53 3.72
7756 8123 6.154534 ACAGCTTGTCCATTAGTAGATGTGTA 59.845 38.462 0.00 0.00 34.53 2.90
7757 8124 6.477033 CAGCTTGTCCATTAGTAGATGTGTAC 59.523 42.308 0.00 0.00 0.00 2.90
7758 8125 6.154534 AGCTTGTCCATTAGTAGATGTGTACA 59.845 38.462 0.00 0.00 0.00 2.90
7759 8126 6.816640 GCTTGTCCATTAGTAGATGTGTACAA 59.183 38.462 0.00 0.00 0.00 2.41
7760 8127 7.201530 GCTTGTCCATTAGTAGATGTGTACAAC 60.202 40.741 0.00 0.00 0.00 3.32
7761 8128 7.234661 TGTCCATTAGTAGATGTGTACAACA 57.765 36.000 0.00 0.00 44.79 3.33
7777 8144 8.942338 GTGTACAACACCATCAGATATCTTAA 57.058 34.615 1.33 0.00 43.05 1.85
7778 8145 9.378551 GTGTACAACACCATCAGATATCTTAAA 57.621 33.333 1.33 0.00 43.05 1.52
7794 8161 9.226345 GATATCTTAAATTTACAACACTGCTGC 57.774 33.333 0.00 0.00 0.00 5.25
7795 8162 5.768317 TCTTAAATTTACAACACTGCTGCC 58.232 37.500 0.00 0.00 0.00 4.85
7796 8163 3.385193 AAATTTACAACACTGCTGCCC 57.615 42.857 0.00 0.00 0.00 5.36
7797 8164 2.292828 ATTTACAACACTGCTGCCCT 57.707 45.000 0.00 0.00 0.00 5.19
7798 8165 2.065899 TTTACAACACTGCTGCCCTT 57.934 45.000 0.00 0.00 0.00 3.95
7799 8166 2.065899 TTACAACACTGCTGCCCTTT 57.934 45.000 0.00 0.00 0.00 3.11
7800 8167 1.604604 TACAACACTGCTGCCCTTTC 58.395 50.000 0.00 0.00 0.00 2.62
7801 8168 0.395586 ACAACACTGCTGCCCTTTCA 60.396 50.000 0.00 0.00 0.00 2.69
7802 8169 0.746063 CAACACTGCTGCCCTTTCAA 59.254 50.000 0.00 0.00 0.00 2.69
7803 8170 1.342174 CAACACTGCTGCCCTTTCAAT 59.658 47.619 0.00 0.00 0.00 2.57
7804 8171 0.963962 ACACTGCTGCCCTTTCAATG 59.036 50.000 0.00 0.00 0.00 2.82
7805 8172 0.963962 CACTGCTGCCCTTTCAATGT 59.036 50.000 0.00 0.00 0.00 2.71
7806 8173 0.963962 ACTGCTGCCCTTTCAATGTG 59.036 50.000 0.00 0.00 0.00 3.21
7807 8174 0.245539 CTGCTGCCCTTTCAATGTGG 59.754 55.000 0.00 0.00 0.00 4.17
7808 8175 1.079612 GCTGCCCTTTCAATGTGGC 60.080 57.895 0.00 0.00 44.27 5.01
7809 8176 1.538687 GCTGCCCTTTCAATGTGGCT 61.539 55.000 0.00 0.00 44.32 4.75
7810 8177 0.971386 CTGCCCTTTCAATGTGGCTT 59.029 50.000 0.00 0.00 44.32 4.35
7811 8178 0.680618 TGCCCTTTCAATGTGGCTTG 59.319 50.000 0.00 0.00 44.32 4.01
7812 8179 0.681175 GCCCTTTCAATGTGGCTTGT 59.319 50.000 0.00 0.00 40.77 3.16
7813 8180 1.606224 GCCCTTTCAATGTGGCTTGTG 60.606 52.381 0.00 0.00 40.77 3.33
7814 8181 1.688197 CCCTTTCAATGTGGCTTGTGT 59.312 47.619 0.00 0.00 0.00 3.72
7815 8182 2.102925 CCCTTTCAATGTGGCTTGTGTT 59.897 45.455 0.00 0.00 0.00 3.32
7816 8183 3.320541 CCCTTTCAATGTGGCTTGTGTTA 59.679 43.478 0.00 0.00 0.00 2.41
7817 8184 4.298332 CCTTTCAATGTGGCTTGTGTTAC 58.702 43.478 0.00 0.00 0.00 2.50
7818 8185 4.037923 CCTTTCAATGTGGCTTGTGTTACT 59.962 41.667 0.00 0.00 0.00 2.24
7819 8186 5.451798 CCTTTCAATGTGGCTTGTGTTACTT 60.452 40.000 0.00 0.00 0.00 2.24
7820 8187 4.829064 TCAATGTGGCTTGTGTTACTTC 57.171 40.909 0.00 0.00 0.00 3.01
7929 8313 9.696917 AATTGTAGAAATTGGACACTCATTTTC 57.303 29.630 0.00 0.00 37.31 2.29
7930 8314 8.463930 TTGTAGAAATTGGACACTCATTTTCT 57.536 30.769 14.71 14.71 43.59 2.52
8145 8534 2.503356 AGCCAGATCCCAGAAACTACAG 59.497 50.000 0.00 0.00 0.00 2.74
8160 8549 2.826725 ACTACAGCAGTACAGGAACTCC 59.173 50.000 0.00 0.00 32.26 3.85
8170 8559 2.408565 ACAGGAACTCCTCAGACCAAA 58.591 47.619 0.00 0.00 46.65 3.28
8190 8579 1.219124 GGCCAGCACTTCTCGATCA 59.781 57.895 0.00 0.00 0.00 2.92
8195 8584 3.669023 GCCAGCACTTCTCGATCAAAAAG 60.669 47.826 0.00 0.00 0.00 2.27
8196 8585 3.748048 CCAGCACTTCTCGATCAAAAAGA 59.252 43.478 0.00 0.00 0.00 2.52
8219 8608 4.394729 TGAACTGGATAAAAGAAGGCGTT 58.605 39.130 0.00 0.00 0.00 4.84
8220 8609 4.215399 TGAACTGGATAAAAGAAGGCGTTG 59.785 41.667 0.00 0.00 0.00 4.10
8245 8637 2.048444 TGAATCATCTTCAGCAGGCC 57.952 50.000 0.00 0.00 0.00 5.19
8389 8781 1.408702 GTGGACCTGCAACACATGTTT 59.591 47.619 0.00 0.00 35.83 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
150 154 5.448438 TCGTCTCAACCAAAATTCAAATCG 58.552 37.500 0.00 0.00 0.00 3.34
229 234 8.795842 TGCTCCTAAATTTAAAACCTTATCGA 57.204 30.769 0.00 0.00 0.00 3.59
230 235 9.849166 TTTGCTCCTAAATTTAAAACCTTATCG 57.151 29.630 0.00 0.00 0.00 2.92
257 262 3.161450 ACGTGTGTGGTGCTCCCT 61.161 61.111 1.59 0.00 0.00 4.20
288 293 8.584157 TGCATTAAACATTTCCTATTGACTTGT 58.416 29.630 0.00 0.00 0.00 3.16
292 297 7.035004 TGCTGCATTAAACATTTCCTATTGAC 58.965 34.615 0.00 0.00 0.00 3.18
318 323 9.777297 GGGTGCCATAAATAACATGATAAATTT 57.223 29.630 0.00 0.00 0.00 1.82
325 330 5.514169 TCTTGGGTGCCATAAATAACATGA 58.486 37.500 0.00 0.00 31.53 3.07
350 355 4.471025 TGCTACCATGATCTTCTTTGGAGA 59.529 41.667 0.00 0.00 0.00 3.71
358 363 8.577296 TGTACTAGTATTGCTACCATGATCTTC 58.423 37.037 5.75 0.00 0.00 2.87
392 397 7.820648 AGTTGTGCTATAAGGTGAGATTTTTG 58.179 34.615 0.00 0.00 0.00 2.44
446 451 7.792383 TTACTACGAAGATCTTTGTTTCGAG 57.208 36.000 29.05 22.29 44.64 4.04
546 551 7.016361 AGCATTTCGTAATGAGTTTGTATCC 57.984 36.000 17.76 0.00 43.12 2.59
548 553 9.109393 ACATAGCATTTCGTAATGAGTTTGTAT 57.891 29.630 17.76 2.87 43.12 2.29
555 560 8.298030 TGTGATACATAGCATTTCGTAATGAG 57.702 34.615 17.76 7.05 43.12 2.90
602 611 3.515602 ATTGTATGGAGATCCTTGGGC 57.484 47.619 0.00 0.00 36.82 5.36
683 692 3.371168 CAAGCAGCGTGTGTGTATTTTT 58.629 40.909 0.00 0.00 0.00 1.94
701 710 8.953368 TGTATATATCCTCTATTGCATGCAAG 57.047 34.615 34.15 23.58 39.47 4.01
843 854 3.360340 GTGGGAGCAGCAGTGTGC 61.360 66.667 8.97 8.97 45.46 4.57
853 871 0.752054 CAGAGAGGAGATGTGGGAGC 59.248 60.000 0.00 0.00 0.00 4.70
855 873 1.643286 AGTCAGAGAGGAGATGTGGGA 59.357 52.381 0.00 0.00 0.00 4.37
860 878 3.486383 GGGTAGAGTCAGAGAGGAGATG 58.514 54.545 0.00 0.00 0.00 2.90
861 879 2.445525 GGGGTAGAGTCAGAGAGGAGAT 59.554 54.545 0.00 0.00 0.00 2.75
917 939 4.572389 TCGCATTTATTGAGAAGAGGAAGC 59.428 41.667 0.00 0.00 30.56 3.86
1132 1155 1.819288 TGTCTCTAGAAGGAGTTGCGG 59.181 52.381 0.00 0.00 35.11 5.69
1149 1172 1.566298 ATCCCTCCCTGTGGCTTGTC 61.566 60.000 0.00 0.00 0.00 3.18
1335 1358 0.777446 TCCTTCCCCTCCAACAAAGG 59.223 55.000 0.00 0.00 38.26 3.11
1441 1470 0.536233 CTCTCTGCCTCGCTAGCCTA 60.536 60.000 9.66 0.00 0.00 3.93
1450 1479 2.961741 TCATCATGGTACTCTCTGCCTC 59.038 50.000 0.00 0.00 0.00 4.70
1454 1486 3.056962 CGGGATCATCATGGTACTCTCTG 60.057 52.174 0.00 0.00 0.00 3.35
1551 1583 4.672899 ACAAAACATATACCTGGCCAAGT 58.327 39.130 12.63 12.63 0.00 3.16
1618 1651 5.347364 GCAATAGACGCAAAATTAAGCCAAA 59.653 36.000 0.00 0.00 0.00 3.28
1636 1669 5.954335 AGAAAACGGAAATGGAAGCAATAG 58.046 37.500 0.00 0.00 0.00 1.73
1656 1689 6.183360 GGTGATCTTTCTTTCCAAACCAAGAA 60.183 38.462 0.00 0.00 37.26 2.52
1661 1694 3.611766 GCGGTGATCTTTCTTTCCAAACC 60.612 47.826 0.00 0.00 0.00 3.27
1662 1695 3.565516 GCGGTGATCTTTCTTTCCAAAC 58.434 45.455 0.00 0.00 0.00 2.93
1763 1797 6.060788 AGGAGCAAATCATTAAGGATCAGAC 58.939 40.000 2.61 0.00 0.00 3.51
1820 1854 1.996786 AAGCAAATCGGGCAGCATCG 61.997 55.000 0.00 0.00 0.00 3.84
1826 1860 4.462483 AGATTTAAAGAAGCAAATCGGGCA 59.538 37.500 0.00 0.00 43.05 5.36
1828 1862 5.450550 GGGAGATTTAAAGAAGCAAATCGGG 60.451 44.000 0.00 0.00 43.05 5.14
1830 1864 6.442513 AGGGAGATTTAAAGAAGCAAATCG 57.557 37.500 0.00 0.00 43.05 3.34
1885 1919 5.067283 GGAGTACTTGTCTCTTCCATCTCTC 59.933 48.000 0.00 0.00 33.06 3.20
1927 1961 8.883731 ACAAATTATTTTGAGACGGATCAGTAG 58.116 33.333 15.19 0.00 44.11 2.57
1974 2008 3.177228 CCTTCTCTCTCTTCCCAAGGAA 58.823 50.000 0.00 0.00 39.66 3.36
1975 2009 2.383683 TCCTTCTCTCTCTTCCCAAGGA 59.616 50.000 0.00 0.00 37.63 3.36
1988 2022 1.008571 GAGGTAACCCCCTCCTTCTCT 59.991 57.143 0.00 0.00 44.49 3.10
1989 2023 1.498264 GAGGTAACCCCCTCCTTCTC 58.502 60.000 0.00 0.00 44.49 2.87
1990 2024 3.734206 GAGGTAACCCCCTCCTTCT 57.266 57.895 0.00 0.00 44.49 2.85
2128 2166 1.059913 CTCCCCCAACCTATAGCTGG 58.940 60.000 10.72 10.72 0.00 4.85
2146 2184 2.000048 AGAGTGAAGTCTCCCCTCTCT 59.000 52.381 0.00 0.00 35.28 3.10
2147 2185 2.375146 GAGAGTGAAGTCTCCCCTCTC 58.625 57.143 4.09 0.00 37.96 3.20
2148 2186 2.525105 GAGAGTGAAGTCTCCCCTCT 57.475 55.000 4.09 0.00 37.59 3.69
2171 2217 3.119708 GGATGTGTGCAAGATCAAGAACC 60.120 47.826 0.00 0.00 0.00 3.62
2350 2410 9.676861 TGATTATTGATGTCTCATTTTCTGTCT 57.323 29.630 0.00 0.00 0.00 3.41
2353 2413 9.731819 CCTTGATTATTGATGTCTCATTTTCTG 57.268 33.333 0.00 0.00 0.00 3.02
2372 2435 5.363580 TGAAGCAACTTTTTCTCCCTTGATT 59.636 36.000 0.00 0.00 0.00 2.57
2374 2437 4.097892 GTGAAGCAACTTTTTCTCCCTTGA 59.902 41.667 0.00 0.00 0.00 3.02
2375 2438 4.098501 AGTGAAGCAACTTTTTCTCCCTTG 59.901 41.667 0.00 0.00 0.00 3.61
2376 2439 4.281657 AGTGAAGCAACTTTTTCTCCCTT 58.718 39.130 0.00 0.00 0.00 3.95
2377 2440 3.903467 AGTGAAGCAACTTTTTCTCCCT 58.097 40.909 0.00 0.00 0.00 4.20
2378 2441 4.339530 AGAAGTGAAGCAACTTTTTCTCCC 59.660 41.667 1.61 0.00 40.48 4.30
2382 2445 5.974158 GGAGAAGAAGTGAAGCAACTTTTTC 59.026 40.000 16.11 16.11 45.12 2.29
2383 2446 5.163509 GGGAGAAGAAGTGAAGCAACTTTTT 60.164 40.000 1.61 2.58 40.48 1.94
2434 2502 0.897621 GGGGTGGAATGGAAAAGCTG 59.102 55.000 0.00 0.00 0.00 4.24
2529 2598 6.212955 GGTCAAGATGAAACGGAAAATTTCA 58.787 36.000 8.09 2.89 46.96 2.69
2593 2663 4.433615 ACATAGGTGAGAAAGTATGCGTG 58.566 43.478 0.00 0.00 0.00 5.34
2648 2718 8.171840 GCTAAACATAGAAGCGATTAATCCATC 58.828 37.037 9.87 5.90 0.00 3.51
2691 2761 2.356794 CGAAGTTAAGGTCGTCCGC 58.643 57.895 0.00 0.00 39.05 5.54
2708 2778 4.335315 TGGCTGCAATTTATAGAGGAAACG 59.665 41.667 0.50 0.00 0.00 3.60
2710 2780 6.350949 GGTTTGGCTGCAATTTATAGAGGAAA 60.351 38.462 0.50 0.00 0.00 3.13
2803 2875 2.733218 TTGTTGTCGCCGCTCTCG 60.733 61.111 0.00 0.00 0.00 4.04
2980 3058 3.169242 TGGGTGTGGCGGTGGTAA 61.169 61.111 0.00 0.00 0.00 2.85
3089 3173 8.260114 TGAGCACTTGATATGAGACTAATCAAA 58.740 33.333 8.09 0.00 38.71 2.69
3125 3215 3.684788 AGCACAAATTAAGGAGTAGCACG 59.315 43.478 0.00 0.00 0.00 5.34
3151 3241 6.200878 TCAAGGAAAGGTAACAAGAAGGAT 57.799 37.500 0.00 0.00 41.41 3.24
3164 3254 5.049828 ACAAAGCGAAAATTCAAGGAAAGG 58.950 37.500 0.00 0.00 0.00 3.11
3286 3397 3.332761 TGAACACAAAAGTAGCAAGCG 57.667 42.857 0.00 0.00 0.00 4.68
3290 3401 7.771183 AGAAAGAATTGAACACAAAAGTAGCA 58.229 30.769 0.00 0.00 0.00 3.49
3300 3414 7.588512 AGATACAGCAAGAAAGAATTGAACAC 58.411 34.615 0.00 0.00 0.00 3.32
3318 3432 6.013898 ACATCCATCCCAAGACATAGATACAG 60.014 42.308 0.00 0.00 0.00 2.74
3380 3500 9.768662 GGACATTCCATCTAATTGCAATTAAAT 57.231 29.630 27.26 19.83 36.28 1.40
3402 3522 3.773560 CCCTTGGGTAAAATGAAGGACA 58.226 45.455 0.00 0.00 37.74 4.02
3403 3523 2.496070 GCCCTTGGGTAAAATGAAGGAC 59.504 50.000 7.61 0.00 37.74 3.85
3404 3524 2.558800 GGCCCTTGGGTAAAATGAAGGA 60.559 50.000 7.61 0.00 37.74 3.36
3423 3550 3.045601 AGCTGTATGTATTCATCCGGC 57.954 47.619 0.00 1.08 40.88 6.13
3424 3551 8.948631 ATTTATAGCTGTATGTATTCATCCGG 57.051 34.615 0.00 0.00 35.70 5.14
3470 3597 2.817901 CATGCCCTTTCAATAGCAAGC 58.182 47.619 0.00 0.00 38.99 4.01
3512 3639 8.483307 AGAACAATGCATGGAAAACATTAATC 57.517 30.769 8.45 0.00 37.84 1.75
3515 3642 8.347004 TCTAGAACAATGCATGGAAAACATTA 57.653 30.769 8.45 0.00 37.84 1.90
3520 3647 7.707624 AATCTCTAGAACAATGCATGGAAAA 57.292 32.000 8.45 0.00 0.00 2.29
3523 3650 6.417258 TGAAATCTCTAGAACAATGCATGGA 58.583 36.000 8.45 0.00 0.00 3.41
3528 3655 7.909121 CAGTGATTGAAATCTCTAGAACAATGC 59.091 37.037 7.17 7.42 37.20 3.56
3566 3779 7.844482 CATGAAATGTGTTTTTGTTTCCTCTC 58.156 34.615 0.00 0.00 40.20 3.20
3902 4139 1.150081 AAAGTCCAGCAGCAGCAGT 59.850 52.632 3.17 0.00 45.49 4.40
3934 4172 0.676184 TATTGCAGCCAAAACGCCAA 59.324 45.000 0.00 0.00 34.05 4.52
3939 4177 6.238076 CCCGATTTAATTATTGCAGCCAAAAC 60.238 38.462 0.00 0.00 34.05 2.43
3952 4190 4.148079 TGCATGCATCCCCGATTTAATTA 58.852 39.130 18.46 0.00 0.00 1.40
3997 4235 2.863704 GCGGCAAGAGAAAAACATGCTT 60.864 45.455 0.00 0.00 37.20 3.91
3998 4236 1.336240 GCGGCAAGAGAAAAACATGCT 60.336 47.619 0.00 0.00 37.20 3.79
4011 4250 1.733360 CCCAATTTTCAATGCGGCAAG 59.267 47.619 6.82 2.73 0.00 4.01
4074 4313 1.668237 GCATACACACACACACACACA 59.332 47.619 0.00 0.00 0.00 3.72
4075 4314 1.332816 CGCATACACACACACACACAC 60.333 52.381 0.00 0.00 0.00 3.82
4079 4318 2.473868 GCATACGCATACACACACACAC 60.474 50.000 0.00 0.00 38.36 3.82
4080 4319 1.729517 GCATACGCATACACACACACA 59.270 47.619 0.00 0.00 38.36 3.72
4081 4320 1.729517 TGCATACGCATACACACACAC 59.270 47.619 0.00 0.00 45.36 3.82
4082 4321 2.086054 TGCATACGCATACACACACA 57.914 45.000 0.00 0.00 45.36 3.72
4121 4360 1.367471 CTGCTTGTCGTCAGGGTGA 59.633 57.895 0.00 0.00 0.00 4.02
4252 4506 1.407299 CCATCTCAGCCGAAATGGTGA 60.407 52.381 0.00 0.00 41.21 4.02
4253 4507 1.019673 CCATCTCAGCCGAAATGGTG 58.980 55.000 0.00 0.00 41.21 4.17
4270 4553 2.102252 GCACCAAATTTCTCAACACCCA 59.898 45.455 0.00 0.00 0.00 4.51
4271 4554 2.547855 GGCACCAAATTTCTCAACACCC 60.548 50.000 0.00 0.00 0.00 4.61
4272 4555 2.754472 GGCACCAAATTTCTCAACACC 58.246 47.619 0.00 0.00 0.00 4.16
4273 4556 2.393764 CGGCACCAAATTTCTCAACAC 58.606 47.619 0.00 0.00 0.00 3.32
4276 4559 0.316841 GCCGGCACCAAATTTCTCAA 59.683 50.000 24.80 0.00 0.00 3.02
4279 4562 2.635443 CGGCCGGCACCAAATTTCT 61.635 57.895 30.85 0.00 0.00 2.52
4280 4563 2.126110 CGGCCGGCACCAAATTTC 60.126 61.111 30.85 6.07 0.00 2.17
4281 4564 3.690280 CCGGCCGGCACCAAATTT 61.690 61.111 34.96 0.00 0.00 1.82
4282 4565 4.669809 TCCGGCCGGCACCAAATT 62.670 61.111 39.89 0.00 34.68 1.82
4283 4566 4.669809 TTCCGGCCGGCACCAAAT 62.670 61.111 39.89 0.00 34.68 2.32
4284 4567 4.896829 TTTCCGGCCGGCACCAAA 62.897 61.111 39.89 29.53 34.68 3.28
4288 4571 3.431725 CTTCTTTCCGGCCGGCAC 61.432 66.667 39.89 16.91 34.68 5.01
4289 4572 3.605749 CTCTTCTTTCCGGCCGGCA 62.606 63.158 39.89 28.66 34.68 5.69
4295 4578 1.139853 CCTGGGATCTCTTCTTTCCGG 59.860 57.143 0.00 0.00 0.00 5.14
4296 4579 1.474143 GCCTGGGATCTCTTCTTTCCG 60.474 57.143 0.00 0.00 0.00 4.30
4297 4580 1.133945 GGCCTGGGATCTCTTCTTTCC 60.134 57.143 0.00 0.00 0.00 3.13
4329 4612 3.112709 GAGGTGGTTGCGACGCTC 61.113 66.667 22.08 13.58 0.00 5.03
4508 4812 3.356290 AGATTGTGGGGTTTGACTATGC 58.644 45.455 0.00 0.00 0.00 3.14
4599 4917 1.515519 GCAATGTGCATGCGACTGG 60.516 57.895 14.09 3.62 44.26 4.00
4631 4954 1.678101 GCATTTACAGATGGGTGAGCC 59.322 52.381 0.00 0.00 0.00 4.70
4632 4955 2.368439 TGCATTTACAGATGGGTGAGC 58.632 47.619 0.00 0.00 0.00 4.26
4633 4956 4.400251 ACATTGCATTTACAGATGGGTGAG 59.600 41.667 0.00 0.00 0.00 3.51
4634 4957 4.158209 CACATTGCATTTACAGATGGGTGA 59.842 41.667 0.00 0.00 0.00 4.02
4635 4958 4.082081 ACACATTGCATTTACAGATGGGTG 60.082 41.667 0.00 0.00 33.41 4.61
4636 4959 4.088634 ACACATTGCATTTACAGATGGGT 58.911 39.130 0.00 0.00 29.96 4.51
4641 4964 5.781210 TCCAAACACATTGCATTTACAGA 57.219 34.783 0.00 0.00 37.73 3.41
4681 5004 8.936864 GCCATCAGATTAACAACCATATACTAC 58.063 37.037 0.00 0.00 0.00 2.73
4682 5005 7.817478 CGCCATCAGATTAACAACCATATACTA 59.183 37.037 0.00 0.00 0.00 1.82
4683 5006 6.650807 CGCCATCAGATTAACAACCATATACT 59.349 38.462 0.00 0.00 0.00 2.12
4684 5007 6.426937 ACGCCATCAGATTAACAACCATATAC 59.573 38.462 0.00 0.00 0.00 1.47
4685 5008 6.530120 ACGCCATCAGATTAACAACCATATA 58.470 36.000 0.00 0.00 0.00 0.86
4686 5009 5.376625 ACGCCATCAGATTAACAACCATAT 58.623 37.500 0.00 0.00 0.00 1.78
4728 5054 2.280797 TGCTGGTTCTGCGTCCAC 60.281 61.111 0.00 0.00 0.00 4.02
5115 5445 4.172512 AGCAGCTCCTCCATGGCG 62.173 66.667 6.96 0.00 35.26 5.69
5247 5577 1.681793 GAGACGAGGCCATACTGCTTA 59.318 52.381 5.01 0.00 0.00 3.09
5283 5613 1.810853 CATGATGACGACGGCTGCA 60.811 57.895 0.65 0.00 0.00 4.41
5286 5616 4.814900 GTCATGATGACGACGGCT 57.185 55.556 10.11 0.00 37.67 5.52
5348 5678 4.934797 AGAAATGATCAAGGAGGGTTGA 57.065 40.909 0.00 0.00 40.68 3.18
5349 5679 5.749462 AGTAGAAATGATCAAGGAGGGTTG 58.251 41.667 0.00 0.00 0.00 3.77
5353 5683 8.572855 AAAAGAAGTAGAAATGATCAAGGAGG 57.427 34.615 0.00 0.00 0.00 4.30
5427 5758 1.624336 ACTGGTTCTGCATTGCACAT 58.376 45.000 7.38 0.00 33.79 3.21
5432 5763 0.095245 CGCGTACTGGTTCTGCATTG 59.905 55.000 0.00 0.00 0.00 2.82
5951 6290 4.868171 TGGCGCACTTCTGTTAATAAGTAG 59.132 41.667 10.83 0.00 34.23 2.57
5953 6292 3.435671 GTGGCGCACTTCTGTTAATAAGT 59.564 43.478 10.83 0.00 36.38 2.24
5954 6293 3.483574 CGTGGCGCACTTCTGTTAATAAG 60.484 47.826 10.83 0.00 31.34 1.73
5955 6294 2.413796 CGTGGCGCACTTCTGTTAATAA 59.586 45.455 10.83 0.00 31.34 1.40
5958 6297 0.531090 ACGTGGCGCACTTCTGTTAA 60.531 50.000 10.83 0.00 31.34 2.01
5966 6313 4.314440 ACATGGACGTGGCGCACT 62.314 61.111 10.83 0.00 31.34 4.40
5971 6318 2.969806 CTGCACACATGGACGTGGC 61.970 63.158 12.36 6.87 41.38 5.01
5997 6345 2.364317 TTCCTCCCCTCCGAGCTG 60.364 66.667 0.00 0.00 0.00 4.24
6030 6378 4.554036 GCCACCATCCTCTCCGCC 62.554 72.222 0.00 0.00 0.00 6.13
6108 6456 4.124351 CTAACGTCCTCGGCGCCA 62.124 66.667 28.98 12.94 41.85 5.69
6183 6531 1.073722 CCAGAAGGAGGTTGCAGCA 59.926 57.895 2.05 0.00 36.89 4.41
6186 6534 0.324943 GTAGCCAGAAGGAGGTTGCA 59.675 55.000 0.00 0.00 36.89 4.08
6189 6537 1.265454 CCGGTAGCCAGAAGGAGGTT 61.265 60.000 0.00 0.00 36.89 3.50
6213 6561 2.202570 TCGAAGACGCGCTTAGGC 60.203 61.111 5.73 0.00 36.83 3.93
6292 6640 6.591448 CCTTAGGATTTCAAGAAATTGGCAAC 59.409 38.462 0.00 0.00 40.77 4.17
6300 6648 8.742777 CATCATCAACCTTAGGATTTCAAGAAA 58.257 33.333 4.77 0.00 34.46 2.52
6474 6830 6.751514 TTTCACACGCATGAGGTTATTATT 57.248 33.333 0.00 0.00 0.00 1.40
6475 6831 6.751514 TTTTCACACGCATGAGGTTATTAT 57.248 33.333 0.00 0.00 0.00 1.28
6476 6832 6.404184 CCATTTTCACACGCATGAGGTTATTA 60.404 38.462 0.00 0.00 0.00 0.98
6496 6852 8.991275 ACACAATATCCATGGTTAATTCCATTT 58.009 29.630 12.58 0.00 44.75 2.32
6500 6856 7.346751 ACACACAATATCCATGGTTAATTCC 57.653 36.000 12.58 0.00 0.00 3.01
6529 6893 0.035317 TTCGAGTTGGTGCTCTGCAT 59.965 50.000 0.00 0.00 41.91 3.96
6591 6955 0.178987 AGATGACGTAGGAGCCCGAT 60.179 55.000 0.00 0.00 0.00 4.18
6630 6994 1.672356 GAGCACCACGTTCATGGCT 60.672 57.895 0.00 0.00 44.33 4.75
6906 7270 3.458163 CGAAGCTACTGCGGGGGA 61.458 66.667 0.00 0.00 45.42 4.81
6970 7334 6.643360 TGCATTTCTCATGAACAGTTTTGATG 59.357 34.615 0.00 0.00 31.02 3.07
6986 7350 1.453155 ACCCGACACATGCATTTCTC 58.547 50.000 0.00 0.00 0.00 2.87
7001 7365 9.556030 GTTTTAGAGAATTCAGATAAAAACCCG 57.444 33.333 17.10 0.00 32.26 5.28
7046 7410 2.105306 AGGCTCCAAAATTTTGCTGCTT 59.895 40.909 28.50 23.67 36.86 3.91
7350 7717 3.719924 ACGACAAGTCCAACGAATTACA 58.280 40.909 0.00 0.00 0.00 2.41
7405 7772 2.359214 TCTCTATTCTGCAGCACCTACG 59.641 50.000 9.47 0.00 0.00 3.51
7529 7896 1.818642 AGCTGAAAGACAGGCACATC 58.181 50.000 0.00 0.00 45.82 3.06
7546 7913 1.136984 GCAGAGATGCAGCACAAGC 59.863 57.895 4.07 2.66 42.56 4.01
7547 7914 1.166129 AAGCAGAGATGCAGCACAAG 58.834 50.000 4.07 0.00 37.25 3.16
7548 7915 1.612676 AAAGCAGAGATGCAGCACAA 58.387 45.000 4.07 0.00 37.25 3.33
7549 7916 2.289882 ACTAAAGCAGAGATGCAGCACA 60.290 45.455 4.07 0.00 37.25 4.57
7550 7917 2.095532 CACTAAAGCAGAGATGCAGCAC 59.904 50.000 4.07 0.00 37.25 4.40
7551 7918 2.027837 TCACTAAAGCAGAGATGCAGCA 60.028 45.455 4.07 0.00 37.25 4.41
7552 7919 2.625737 TCACTAAAGCAGAGATGCAGC 58.374 47.619 0.00 0.00 37.25 5.25
7553 7920 3.622163 CCTTCACTAAAGCAGAGATGCAG 59.378 47.826 2.73 0.00 37.25 4.41
7554 7921 3.603532 CCTTCACTAAAGCAGAGATGCA 58.396 45.455 2.73 0.00 37.25 3.96
7555 7922 2.354199 GCCTTCACTAAAGCAGAGATGC 59.646 50.000 0.00 0.00 33.29 3.91
7556 7923 3.603532 TGCCTTCACTAAAGCAGAGATG 58.396 45.455 0.00 0.00 33.29 2.90
7557 7924 3.988976 TGCCTTCACTAAAGCAGAGAT 57.011 42.857 0.00 0.00 33.29 2.75
7558 7925 3.769739 TTGCCTTCACTAAAGCAGAGA 57.230 42.857 0.00 0.00 33.29 3.10
7559 7926 6.690194 ATATTTGCCTTCACTAAAGCAGAG 57.310 37.500 0.00 0.00 33.29 3.35
7560 7927 7.829211 ACTAATATTTGCCTTCACTAAAGCAGA 59.171 33.333 0.00 0.00 33.29 4.26
7561 7928 7.989826 ACTAATATTTGCCTTCACTAAAGCAG 58.010 34.615 0.00 0.00 33.29 4.24
7562 7929 7.938140 ACTAATATTTGCCTTCACTAAAGCA 57.062 32.000 0.00 0.00 33.29 3.91
7568 7935 9.740710 AGAACTTAACTAATATTTGCCTTCACT 57.259 29.630 0.00 0.00 0.00 3.41
7574 7941 9.290483 GCTGAAAGAACTTAACTAATATTTGCC 57.710 33.333 0.00 0.00 34.07 4.52
7580 7947 8.504005 GCACAAGCTGAAAGAACTTAACTAATA 58.496 33.333 0.00 0.00 37.91 0.98
7581 7948 7.363431 GCACAAGCTGAAAGAACTTAACTAAT 58.637 34.615 0.00 0.00 37.91 1.73
7582 7949 6.725246 GCACAAGCTGAAAGAACTTAACTAA 58.275 36.000 0.00 0.00 37.91 2.24
7583 7950 6.300354 GCACAAGCTGAAAGAACTTAACTA 57.700 37.500 0.00 0.00 37.91 2.24
7584 7951 5.175090 GCACAAGCTGAAAGAACTTAACT 57.825 39.130 0.00 0.00 37.91 2.24
7599 7966 0.321475 AGCAGAGAAGGAGCACAAGC 60.321 55.000 0.00 0.00 42.56 4.01
7600 7967 2.075338 GAAGCAGAGAAGGAGCACAAG 58.925 52.381 0.00 0.00 0.00 3.16
7601 7968 1.417517 TGAAGCAGAGAAGGAGCACAA 59.582 47.619 0.00 0.00 0.00 3.33
7602 7969 1.001746 CTGAAGCAGAGAAGGAGCACA 59.998 52.381 0.00 0.00 32.44 4.57
7603 7970 1.001860 ACTGAAGCAGAGAAGGAGCAC 59.998 52.381 0.82 0.00 35.18 4.40
7604 7971 1.001746 CACTGAAGCAGAGAAGGAGCA 59.998 52.381 0.82 0.00 35.18 4.26
7605 7972 1.274728 TCACTGAAGCAGAGAAGGAGC 59.725 52.381 0.82 0.00 35.18 4.70
7606 7973 3.674528 TTCACTGAAGCAGAGAAGGAG 57.325 47.619 0.82 0.00 36.48 3.69
7610 7977 1.417517 TGCCTTCACTGAAGCAGAGAA 59.582 47.619 12.69 4.47 38.37 2.87
7611 7978 1.051008 TGCCTTCACTGAAGCAGAGA 58.949 50.000 12.69 0.00 38.24 3.10
7612 7979 1.888215 TTGCCTTCACTGAAGCAGAG 58.112 50.000 12.69 1.57 38.24 3.35
7613 7980 2.346766 TTTGCCTTCACTGAAGCAGA 57.653 45.000 12.69 7.53 38.24 4.26
7614 7981 4.978083 ATATTTGCCTTCACTGAAGCAG 57.022 40.909 12.69 2.55 38.24 4.24
7615 7982 5.945784 ACTAATATTTGCCTTCACTGAAGCA 59.054 36.000 12.69 11.27 38.24 3.91
7616 7983 6.442513 ACTAATATTTGCCTTCACTGAAGC 57.557 37.500 12.69 9.12 38.24 3.86
7617 7984 7.337942 AGGAACTAATATTTGCCTTCACTGAAG 59.662 37.037 11.37 11.37 36.02 3.02
7618 7985 7.121168 CAGGAACTAATATTTGCCTTCACTGAA 59.879 37.037 0.00 0.00 36.02 3.02
7619 7986 6.599244 CAGGAACTAATATTTGCCTTCACTGA 59.401 38.462 0.00 0.00 36.02 3.41
7620 7987 6.599244 TCAGGAACTAATATTTGCCTTCACTG 59.401 38.462 0.00 3.74 36.02 3.66
7621 7988 6.721318 TCAGGAACTAATATTTGCCTTCACT 58.279 36.000 0.00 0.00 36.02 3.41
7622 7989 7.391148 TTCAGGAACTAATATTTGCCTTCAC 57.609 36.000 0.00 0.00 36.02 3.18
7623 7990 7.122650 CCTTTCAGGAACTAATATTTGCCTTCA 59.877 37.037 0.00 0.00 37.67 3.02
7624 7991 7.484140 CCTTTCAGGAACTAATATTTGCCTTC 58.516 38.462 0.00 0.00 37.67 3.46
7625 7992 6.127338 GCCTTTCAGGAACTAATATTTGCCTT 60.127 38.462 0.00 0.00 37.67 4.35
7626 7993 5.360999 GCCTTTCAGGAACTAATATTTGCCT 59.639 40.000 0.00 0.00 37.67 4.75
7627 7994 5.127031 TGCCTTTCAGGAACTAATATTTGCC 59.873 40.000 0.00 0.00 37.67 4.52
7628 7995 6.207691 TGCCTTTCAGGAACTAATATTTGC 57.792 37.500 0.00 0.00 37.67 3.68
7629 7996 9.657419 AAATTGCCTTTCAGGAACTAATATTTG 57.343 29.630 0.00 0.00 37.67 2.32
7630 7997 9.875691 GAAATTGCCTTTCAGGAACTAATATTT 57.124 29.630 0.00 0.00 42.42 1.40
7631 7998 8.478066 GGAAATTGCCTTTCAGGAACTAATATT 58.522 33.333 0.00 0.00 44.29 1.28
7632 7999 7.201821 CGGAAATTGCCTTTCAGGAACTAATAT 60.202 37.037 0.00 0.00 44.29 1.28
7633 8000 6.094881 CGGAAATTGCCTTTCAGGAACTAATA 59.905 38.462 0.00 0.00 44.29 0.98
7634 8001 5.105756 CGGAAATTGCCTTTCAGGAACTAAT 60.106 40.000 0.00 0.00 44.29 1.73
7635 8002 4.217550 CGGAAATTGCCTTTCAGGAACTAA 59.782 41.667 0.00 0.00 44.29 2.24
7636 8003 3.756434 CGGAAATTGCCTTTCAGGAACTA 59.244 43.478 0.00 0.00 44.29 2.24
7637 8004 2.558359 CGGAAATTGCCTTTCAGGAACT 59.442 45.455 0.00 0.00 44.29 3.01
7638 8005 2.926586 GCGGAAATTGCCTTTCAGGAAC 60.927 50.000 0.00 0.00 44.29 3.62
7639 8006 1.272212 GCGGAAATTGCCTTTCAGGAA 59.728 47.619 0.00 0.00 44.29 3.36
7640 8007 0.887933 GCGGAAATTGCCTTTCAGGA 59.112 50.000 0.00 0.00 44.29 3.86
7641 8008 0.456653 CGCGGAAATTGCCTTTCAGG 60.457 55.000 0.00 4.01 44.29 3.86
7642 8009 1.072666 GCGCGGAAATTGCCTTTCAG 61.073 55.000 8.83 7.59 44.29 3.02
7643 8010 1.080839 GCGCGGAAATTGCCTTTCA 60.081 52.632 8.83 0.00 44.29 2.69
7644 8011 0.798389 GAGCGCGGAAATTGCCTTTC 60.798 55.000 8.83 1.27 42.18 2.62
7645 8012 1.212751 GAGCGCGGAAATTGCCTTT 59.787 52.632 8.83 0.00 0.00 3.11
7646 8013 1.523154 TTGAGCGCGGAAATTGCCTT 61.523 50.000 8.83 0.00 0.00 4.35
7647 8014 1.523154 TTTGAGCGCGGAAATTGCCT 61.523 50.000 8.83 0.00 0.00 4.75
7648 8015 0.458370 ATTTGAGCGCGGAAATTGCC 60.458 50.000 8.83 0.00 0.00 4.52
7649 8016 2.111756 CTATTTGAGCGCGGAAATTGC 58.888 47.619 20.17 0.00 0.00 3.56
7650 8017 2.111756 GCTATTTGAGCGCGGAAATTG 58.888 47.619 20.17 18.79 42.62 2.32
7651 8018 2.475200 GCTATTTGAGCGCGGAAATT 57.525 45.000 20.17 8.17 42.62 1.82
7661 8028 2.681848 CTGCTCAGTTGGGCTATTTGAG 59.318 50.000 5.47 7.48 38.57 3.02
7662 8029 2.040278 ACTGCTCAGTTGGGCTATTTGA 59.960 45.455 5.47 0.00 38.83 2.69
7663 8030 2.440409 ACTGCTCAGTTGGGCTATTTG 58.560 47.619 5.47 0.00 38.83 2.32
7664 8031 2.887151 ACTGCTCAGTTGGGCTATTT 57.113 45.000 5.47 0.00 38.83 1.40
7674 8041 6.711277 TCATATACCAAAAGAACTGCTCAGT 58.289 36.000 0.00 0.00 44.94 3.41
7675 8042 7.798596 ATCATATACCAAAAGAACTGCTCAG 57.201 36.000 0.00 0.00 0.00 3.35
7676 8043 7.415541 GCAATCATATACCAAAAGAACTGCTCA 60.416 37.037 0.00 0.00 0.00 4.26
7677 8044 6.914757 GCAATCATATACCAAAAGAACTGCTC 59.085 38.462 0.00 0.00 0.00 4.26
7678 8045 6.377996 TGCAATCATATACCAAAAGAACTGCT 59.622 34.615 0.00 0.00 0.00 4.24
7679 8046 6.563422 TGCAATCATATACCAAAAGAACTGC 58.437 36.000 0.00 0.00 0.00 4.40
7680 8047 7.988737 TCTGCAATCATATACCAAAAGAACTG 58.011 34.615 0.00 0.00 0.00 3.16
7681 8048 8.579850 TTCTGCAATCATATACCAAAAGAACT 57.420 30.769 0.00 0.00 0.00 3.01
7682 8049 9.076596 GTTTCTGCAATCATATACCAAAAGAAC 57.923 33.333 0.00 0.00 0.00 3.01
7683 8050 8.801299 TGTTTCTGCAATCATATACCAAAAGAA 58.199 29.630 0.00 0.00 0.00 2.52
7684 8051 8.347004 TGTTTCTGCAATCATATACCAAAAGA 57.653 30.769 0.00 0.00 0.00 2.52
7685 8052 8.984891 TTGTTTCTGCAATCATATACCAAAAG 57.015 30.769 0.00 0.00 0.00 2.27
7686 8053 9.368674 CATTGTTTCTGCAATCATATACCAAAA 57.631 29.630 0.00 0.00 37.00 2.44
7687 8054 8.747471 TCATTGTTTCTGCAATCATATACCAAA 58.253 29.630 0.00 0.00 37.00 3.28
7688 8055 8.291191 TCATTGTTTCTGCAATCATATACCAA 57.709 30.769 0.00 0.00 37.00 3.67
7689 8056 7.774625 TCTCATTGTTTCTGCAATCATATACCA 59.225 33.333 0.00 0.00 37.00 3.25
7690 8057 8.072567 GTCTCATTGTTTCTGCAATCATATACC 58.927 37.037 0.00 0.00 37.00 2.73
7691 8058 8.072567 GGTCTCATTGTTTCTGCAATCATATAC 58.927 37.037 0.00 0.00 37.00 1.47
7692 8059 7.229306 GGGTCTCATTGTTTCTGCAATCATATA 59.771 37.037 0.00 0.00 37.00 0.86
7693 8060 6.040166 GGGTCTCATTGTTTCTGCAATCATAT 59.960 38.462 0.00 0.00 37.00 1.78
7694 8061 5.357878 GGGTCTCATTGTTTCTGCAATCATA 59.642 40.000 0.00 0.00 37.00 2.15
7695 8062 4.159135 GGGTCTCATTGTTTCTGCAATCAT 59.841 41.667 0.00 0.00 37.00 2.45
7696 8063 3.507233 GGGTCTCATTGTTTCTGCAATCA 59.493 43.478 0.00 0.00 37.00 2.57
7697 8064 3.119352 GGGGTCTCATTGTTTCTGCAATC 60.119 47.826 0.00 0.00 37.00 2.67
7698 8065 2.827921 GGGGTCTCATTGTTTCTGCAAT 59.172 45.455 0.00 0.00 39.42 3.56
7699 8066 2.238521 GGGGTCTCATTGTTTCTGCAA 58.761 47.619 0.00 0.00 0.00 4.08
7700 8067 1.547675 GGGGGTCTCATTGTTTCTGCA 60.548 52.381 0.00 0.00 0.00 4.41
7701 8068 1.177401 GGGGGTCTCATTGTTTCTGC 58.823 55.000 0.00 0.00 0.00 4.26
7702 8069 2.584835 TGGGGGTCTCATTGTTTCTG 57.415 50.000 0.00 0.00 0.00 3.02
7703 8070 3.075882 TGATTGGGGGTCTCATTGTTTCT 59.924 43.478 0.00 0.00 0.00 2.52
7704 8071 3.193479 GTGATTGGGGGTCTCATTGTTTC 59.807 47.826 0.00 0.00 0.00 2.78
7705 8072 3.165071 GTGATTGGGGGTCTCATTGTTT 58.835 45.455 0.00 0.00 0.00 2.83
7706 8073 2.109834 TGTGATTGGGGGTCTCATTGTT 59.890 45.455 0.00 0.00 0.00 2.83
7707 8074 1.710244 TGTGATTGGGGGTCTCATTGT 59.290 47.619 0.00 0.00 0.00 2.71
7708 8075 2.512692 TGTGATTGGGGGTCTCATTG 57.487 50.000 0.00 0.00 0.00 2.82
7709 8076 2.649312 TCTTGTGATTGGGGGTCTCATT 59.351 45.455 0.00 0.00 0.00 2.57
7710 8077 2.278245 TCTTGTGATTGGGGGTCTCAT 58.722 47.619 0.00 0.00 0.00 2.90
7711 8078 1.741028 TCTTGTGATTGGGGGTCTCA 58.259 50.000 0.00 0.00 0.00 3.27
7712 8079 2.224769 TGTTCTTGTGATTGGGGGTCTC 60.225 50.000 0.00 0.00 0.00 3.36
7713 8080 1.780309 TGTTCTTGTGATTGGGGGTCT 59.220 47.619 0.00 0.00 0.00 3.85
7714 8081 2.162681 CTGTTCTTGTGATTGGGGGTC 58.837 52.381 0.00 0.00 0.00 4.46
7715 8082 1.823250 GCTGTTCTTGTGATTGGGGGT 60.823 52.381 0.00 0.00 0.00 4.95
7716 8083 0.890683 GCTGTTCTTGTGATTGGGGG 59.109 55.000 0.00 0.00 0.00 5.40
7717 8084 1.915141 AGCTGTTCTTGTGATTGGGG 58.085 50.000 0.00 0.00 0.00 4.96
7718 8085 3.293311 CAAGCTGTTCTTGTGATTGGG 57.707 47.619 0.00 0.00 45.48 4.12
7727 8094 6.360370 TCTACTAATGGACAAGCTGTTCTT 57.640 37.500 0.00 0.00 34.78 2.52
7728 8095 6.070538 ACATCTACTAATGGACAAGCTGTTCT 60.071 38.462 0.00 0.00 0.00 3.01
7729 8096 6.036517 CACATCTACTAATGGACAAGCTGTTC 59.963 42.308 0.00 0.00 0.00 3.18
7730 8097 5.877012 CACATCTACTAATGGACAAGCTGTT 59.123 40.000 0.00 0.00 0.00 3.16
7731 8098 5.046304 ACACATCTACTAATGGACAAGCTGT 60.046 40.000 0.00 0.00 0.00 4.40
7732 8099 5.423015 ACACATCTACTAATGGACAAGCTG 58.577 41.667 0.00 0.00 0.00 4.24
7733 8100 5.683876 ACACATCTACTAATGGACAAGCT 57.316 39.130 0.00 0.00 0.00 3.74
7734 8101 6.338146 TGTACACATCTACTAATGGACAAGC 58.662 40.000 0.00 0.00 0.00 4.01
7735 8102 7.817478 TGTTGTACACATCTACTAATGGACAAG 59.183 37.037 0.00 0.00 32.91 3.16
7736 8103 7.672240 TGTTGTACACATCTACTAATGGACAA 58.328 34.615 0.00 0.00 31.29 3.18
7737 8104 7.234661 TGTTGTACACATCTACTAATGGACA 57.765 36.000 0.00 0.00 0.00 4.02
7768 8135 9.226345 GCAGCAGTGTTGTAAATTTAAGATATC 57.774 33.333 8.86 0.00 0.00 1.63
7769 8136 8.190784 GGCAGCAGTGTTGTAAATTTAAGATAT 58.809 33.333 8.86 0.00 0.00 1.63
7770 8137 7.362574 GGGCAGCAGTGTTGTAAATTTAAGATA 60.363 37.037 8.86 0.00 0.00 1.98
7771 8138 6.389906 GGCAGCAGTGTTGTAAATTTAAGAT 58.610 36.000 8.86 0.00 0.00 2.40
7772 8139 5.278758 GGGCAGCAGTGTTGTAAATTTAAGA 60.279 40.000 8.86 0.00 0.00 2.10
7773 8140 4.923281 GGGCAGCAGTGTTGTAAATTTAAG 59.077 41.667 8.86 0.00 0.00 1.85
7774 8141 4.586841 AGGGCAGCAGTGTTGTAAATTTAA 59.413 37.500 8.86 0.00 0.00 1.52
7775 8142 4.148838 AGGGCAGCAGTGTTGTAAATTTA 58.851 39.130 8.86 0.00 0.00 1.40
7776 8143 2.965147 AGGGCAGCAGTGTTGTAAATTT 59.035 40.909 8.86 0.00 0.00 1.82
7777 8144 2.597455 AGGGCAGCAGTGTTGTAAATT 58.403 42.857 8.86 0.00 0.00 1.82
7778 8145 2.292828 AGGGCAGCAGTGTTGTAAAT 57.707 45.000 8.86 0.00 0.00 1.40
7779 8146 2.065899 AAGGGCAGCAGTGTTGTAAA 57.934 45.000 8.86 0.00 0.00 2.01
7780 8147 1.953686 GAAAGGGCAGCAGTGTTGTAA 59.046 47.619 8.86 0.00 0.00 2.41
7781 8148 1.133945 TGAAAGGGCAGCAGTGTTGTA 60.134 47.619 8.86 0.00 0.00 2.41
7782 8149 0.395586 TGAAAGGGCAGCAGTGTTGT 60.396 50.000 8.86 0.00 0.00 3.32
7783 8150 0.746063 TTGAAAGGGCAGCAGTGTTG 59.254 50.000 2.05 2.05 0.00 3.33
7784 8151 1.342174 CATTGAAAGGGCAGCAGTGTT 59.658 47.619 0.00 0.00 0.00 3.32
7785 8152 0.963962 CATTGAAAGGGCAGCAGTGT 59.036 50.000 0.00 0.00 0.00 3.55
7786 8153 0.963962 ACATTGAAAGGGCAGCAGTG 59.036 50.000 0.00 0.00 0.00 3.66
7787 8154 0.963962 CACATTGAAAGGGCAGCAGT 59.036 50.000 0.00 0.00 0.00 4.40
7788 8155 0.245539 CCACATTGAAAGGGCAGCAG 59.754 55.000 0.00 0.00 0.00 4.24
7789 8156 1.818959 GCCACATTGAAAGGGCAGCA 61.819 55.000 0.00 0.00 45.70 4.41
7790 8157 1.079612 GCCACATTGAAAGGGCAGC 60.080 57.895 0.00 0.00 45.70 5.25
7793 8160 0.681175 ACAAGCCACATTGAAAGGGC 59.319 50.000 0.00 0.00 46.77 5.19
7794 8161 1.688197 ACACAAGCCACATTGAAAGGG 59.312 47.619 0.00 0.00 34.20 3.95
7795 8162 3.457610 AACACAAGCCACATTGAAAGG 57.542 42.857 0.00 0.00 34.20 3.11
7796 8163 5.186996 AGTAACACAAGCCACATTGAAAG 57.813 39.130 0.00 0.00 34.20 2.62
7797 8164 5.359576 AGAAGTAACACAAGCCACATTGAAA 59.640 36.000 0.00 0.00 34.20 2.69
7798 8165 4.887071 AGAAGTAACACAAGCCACATTGAA 59.113 37.500 0.00 0.00 34.20 2.69
7799 8166 4.460263 AGAAGTAACACAAGCCACATTGA 58.540 39.130 0.00 0.00 34.20 2.57
7800 8167 4.516698 AGAGAAGTAACACAAGCCACATTG 59.483 41.667 0.00 0.00 36.22 2.82
7801 8168 4.516698 CAGAGAAGTAACACAAGCCACATT 59.483 41.667 0.00 0.00 0.00 2.71
7802 8169 4.067896 CAGAGAAGTAACACAAGCCACAT 58.932 43.478 0.00 0.00 0.00 3.21
7803 8170 3.466836 CAGAGAAGTAACACAAGCCACA 58.533 45.455 0.00 0.00 0.00 4.17
7804 8171 2.224314 GCAGAGAAGTAACACAAGCCAC 59.776 50.000 0.00 0.00 0.00 5.01
7805 8172 2.104792 AGCAGAGAAGTAACACAAGCCA 59.895 45.455 0.00 0.00 0.00 4.75
7806 8173 2.772287 AGCAGAGAAGTAACACAAGCC 58.228 47.619 0.00 0.00 0.00 4.35
7807 8174 3.809832 TGAAGCAGAGAAGTAACACAAGC 59.190 43.478 0.00 0.00 0.00 4.01
7808 8175 5.050499 CACTGAAGCAGAGAAGTAACACAAG 60.050 44.000 0.82 0.00 35.18 3.16
7809 8176 4.811024 CACTGAAGCAGAGAAGTAACACAA 59.189 41.667 0.82 0.00 35.18 3.33
7810 8177 4.099419 TCACTGAAGCAGAGAAGTAACACA 59.901 41.667 0.82 0.00 35.18 3.72
7811 8178 4.621991 TCACTGAAGCAGAGAAGTAACAC 58.378 43.478 0.82 0.00 35.18 3.32
7812 8179 4.937201 TCACTGAAGCAGAGAAGTAACA 57.063 40.909 0.82 0.00 35.18 2.41
7813 8180 5.837586 CTTCACTGAAGCAGAGAAGTAAC 57.162 43.478 19.65 0.00 46.38 2.50
7818 8185 1.417517 TGCCTTCACTGAAGCAGAGAA 59.582 47.619 12.69 4.47 38.37 2.87
7819 8186 1.051008 TGCCTTCACTGAAGCAGAGA 58.949 50.000 12.69 0.00 38.24 3.10
7820 8187 1.888215 TTGCCTTCACTGAAGCAGAG 58.112 50.000 12.69 1.57 38.24 3.35
7963 8347 7.234166 ACATCTGGAAATGGAAAGATTGTTCTT 59.766 33.333 0.00 0.00 44.20 2.52
7967 8351 5.337009 GCACATCTGGAAATGGAAAGATTGT 60.337 40.000 0.00 0.00 0.00 2.71
7968 8352 5.107133 GCACATCTGGAAATGGAAAGATTG 58.893 41.667 0.00 0.00 0.00 2.67
8160 8549 1.676967 GCTGGCCCTTTGGTCTGAG 60.677 63.158 0.00 0.00 37.37 3.35
8170 8559 1.965754 GATCGAGAAGTGCTGGCCCT 61.966 60.000 0.00 0.00 0.00 5.19
8190 8579 8.090831 GCCTTCTTTTATCCAGTTCATCTTTTT 58.909 33.333 0.00 0.00 0.00 1.94
8195 8584 4.636206 ACGCCTTCTTTTATCCAGTTCATC 59.364 41.667 0.00 0.00 0.00 2.92
8196 8585 4.589908 ACGCCTTCTTTTATCCAGTTCAT 58.410 39.130 0.00 0.00 0.00 2.57
8219 8608 2.751259 GCTGAAGATGATTCAAGTGCCA 59.249 45.455 0.00 0.00 0.00 4.92
8220 8609 2.751259 TGCTGAAGATGATTCAAGTGCC 59.249 45.455 0.00 0.00 0.00 5.01
8389 8781 2.829023 CTACCTAACCCCTGGACTCAA 58.171 52.381 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.