Multiple sequence alignment - TraesCS2B01G496900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G496900 chr2B 100.000 2534 0 0 1 2534 693345300 693347833 0.000000e+00 4680.0
1 TraesCS2B01G496900 chr2B 88.909 559 56 2 70 628 693727011 693727563 0.000000e+00 684.0
2 TraesCS2B01G496900 chr2B 84.430 745 53 24 380 1095 693848172 693848882 0.000000e+00 675.0
3 TraesCS2B01G496900 chr2B 87.143 560 64 5 70 628 693740689 693741241 1.650000e-176 628.0
4 TraesCS2B01G496900 chr2B 86.606 545 38 13 690 1227 693325263 693325779 1.020000e-158 569.0
5 TraesCS2B01G496900 chr2B 83.750 560 83 5 70 628 693368203 693368755 8.030000e-145 523.0
6 TraesCS2B01G496900 chr2B 80.661 605 80 16 1232 1807 693325848 693326444 3.870000e-118 435.0
7 TraesCS2B01G496900 chr2B 83.368 475 44 13 688 1155 693727542 693727988 8.440000e-110 407.0
8 TraesCS2B01G496900 chr2B 81.373 510 66 14 690 1190 693368736 693369225 3.060000e-104 388.0
9 TraesCS2B01G496900 chr2B 79.322 590 94 21 1240 1812 693728120 693728698 3.060000e-104 388.0
10 TraesCS2B01G496900 chr2B 78.173 591 99 23 1240 1807 693849206 693849789 1.440000e-92 350.0
11 TraesCS2B01G496900 chr2B 81.174 409 68 5 1242 1647 693741778 693742180 1.130000e-83 320.0
12 TraesCS2B01G496900 chr2B 91.189 227 18 2 2310 2534 693729223 693729449 8.810000e-80 307.0
13 TraesCS2B01G496900 chr2B 78.958 480 48 21 690 1158 693741222 693741659 6.900000e-71 278.0
14 TraesCS2B01G496900 chr2D 88.414 561 58 6 70 628 577111726 577112281 0.000000e+00 669.0
15 TraesCS2B01G496900 chr2D 83.648 477 51 11 690 1158 577112262 577112719 8.380000e-115 424.0
16 TraesCS2B01G496900 chr2D 79.932 588 88 17 1232 1799 577112841 577113418 3.040000e-109 405.0
17 TraesCS2B01G496900 chr2D 94.643 56 2 1 1 55 646046508 646046453 4.490000e-13 86.1
18 TraesCS2B01G496900 chr2D 92.857 56 3 1 1 55 125316713 125316768 2.090000e-11 80.5
19 TraesCS2B01G496900 chr2D 90.000 60 3 2 1 57 552532028 552532087 9.720000e-10 75.0
20 TraesCS2B01G496900 chr2A 81.624 468 50 12 691 1152 715290399 715290836 3.100000e-94 355.0
21 TraesCS2B01G496900 chr3D 92.754 69 2 3 1 67 445622056 445622123 2.070000e-16 97.1
22 TraesCS2B01G496900 chr3D 93.220 59 2 2 1 57 5018478 5018420 4.490000e-13 86.1
23 TraesCS2B01G496900 chr1D 88.312 77 5 3 1 73 24118593 24118517 3.470000e-14 89.8
24 TraesCS2B01G496900 chr1D 91.228 57 3 2 1 55 410599400 410599344 2.700000e-10 76.8
25 TraesCS2B01G496900 chr3B 71.717 297 71 10 78 369 30285130 30285418 1.260000e-08 71.3
26 TraesCS2B01G496900 chr7D 94.286 35 1 1 21 54 563636153 563636119 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G496900 chr2B 693345300 693347833 2533 False 4680.000000 4680 100.0000 1 2534 1 chr2B.!!$F1 2533
1 TraesCS2B01G496900 chr2B 693848172 693849789 1617 False 512.500000 675 81.3015 380 1807 2 chr2B.!!$F6 1427
2 TraesCS2B01G496900 chr2B 693325263 693326444 1181 False 502.000000 569 83.6335 690 1807 2 chr2B.!!$F2 1117
3 TraesCS2B01G496900 chr2B 693368203 693369225 1022 False 455.500000 523 82.5615 70 1190 2 chr2B.!!$F3 1120
4 TraesCS2B01G496900 chr2B 693727011 693729449 2438 False 446.500000 684 85.6970 70 2534 4 chr2B.!!$F4 2464
5 TraesCS2B01G496900 chr2B 693740689 693742180 1491 False 408.666667 628 82.4250 70 1647 3 chr2B.!!$F5 1577
6 TraesCS2B01G496900 chr2D 577111726 577113418 1692 False 499.333333 669 83.9980 70 1799 3 chr2D.!!$F3 1729

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
49 50 0.036671 CCCGGTCTTCCTTAGCGTTT 60.037 55.0 0.0 0.0 36.16 3.6 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2010 2403 0.037975 AAGCATGCGCCCAAGAAAAG 60.038 50.0 13.01 0.0 39.83 2.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.478547 TTTTCGACGTTTTGGCTTCC 57.521 45.000 0.00 0.00 0.00 3.46
30 31 0.664224 TTTCGACGTTTTGGCTTCCC 59.336 50.000 0.00 0.00 0.00 3.97
31 32 1.167781 TTCGACGTTTTGGCTTCCCC 61.168 55.000 0.00 0.00 0.00 4.81
32 33 2.622962 CGACGTTTTGGCTTCCCCC 61.623 63.158 0.00 0.00 0.00 5.40
33 34 2.596338 ACGTTTTGGCTTCCCCCG 60.596 61.111 0.00 0.00 0.00 5.73
34 35 3.370231 CGTTTTGGCTTCCCCCGG 61.370 66.667 0.00 0.00 0.00 5.73
35 36 2.203582 GTTTTGGCTTCCCCCGGT 60.204 61.111 0.00 0.00 0.00 5.28
36 37 2.116556 TTTTGGCTTCCCCCGGTC 59.883 61.111 0.00 0.00 0.00 4.79
37 38 2.466186 TTTTGGCTTCCCCCGGTCT 61.466 57.895 0.00 0.00 0.00 3.85
38 39 2.014033 TTTTGGCTTCCCCCGGTCTT 62.014 55.000 0.00 0.00 0.00 3.01
39 40 2.420466 TTTGGCTTCCCCCGGTCTTC 62.420 60.000 0.00 0.00 0.00 2.87
40 41 4.111053 GGCTTCCCCCGGTCTTCC 62.111 72.222 0.00 0.00 0.00 3.46
41 42 3.009714 GCTTCCCCCGGTCTTCCT 61.010 66.667 0.00 0.00 0.00 3.36
42 43 2.603652 GCTTCCCCCGGTCTTCCTT 61.604 63.158 0.00 0.00 0.00 3.36
43 44 1.269703 GCTTCCCCCGGTCTTCCTTA 61.270 60.000 0.00 0.00 0.00 2.69
44 45 0.831307 CTTCCCCCGGTCTTCCTTAG 59.169 60.000 0.00 0.00 0.00 2.18
45 46 1.269703 TTCCCCCGGTCTTCCTTAGC 61.270 60.000 0.00 0.00 0.00 3.09
46 47 2.499685 CCCCGGTCTTCCTTAGCG 59.500 66.667 0.00 0.00 37.58 4.26
47 48 2.356780 CCCCGGTCTTCCTTAGCGT 61.357 63.158 0.00 0.00 36.16 5.07
48 49 1.595357 CCCGGTCTTCCTTAGCGTT 59.405 57.895 0.00 0.00 36.16 4.84
49 50 0.036671 CCCGGTCTTCCTTAGCGTTT 60.037 55.000 0.00 0.00 36.16 3.60
50 51 1.356938 CCGGTCTTCCTTAGCGTTTC 58.643 55.000 0.00 0.00 36.16 2.78
51 52 0.989890 CGGTCTTCCTTAGCGTTTCG 59.010 55.000 0.00 0.00 33.40 3.46
52 53 1.401931 CGGTCTTCCTTAGCGTTTCGA 60.402 52.381 0.00 0.00 33.40 3.71
53 54 1.991264 GGTCTTCCTTAGCGTTTCGAC 59.009 52.381 0.00 0.00 0.00 4.20
54 55 1.991264 GTCTTCCTTAGCGTTTCGACC 59.009 52.381 0.00 0.00 0.00 4.79
55 56 1.067354 TCTTCCTTAGCGTTTCGACCC 60.067 52.381 0.00 0.00 0.00 4.46
56 57 0.680618 TTCCTTAGCGTTTCGACCCA 59.319 50.000 0.00 0.00 0.00 4.51
57 58 0.245539 TCCTTAGCGTTTCGACCCAG 59.754 55.000 0.00 0.00 0.00 4.45
58 59 0.245539 CCTTAGCGTTTCGACCCAGA 59.754 55.000 0.00 0.00 0.00 3.86
59 60 1.134788 CCTTAGCGTTTCGACCCAGAT 60.135 52.381 0.00 0.00 0.00 2.90
60 61 2.618053 CTTAGCGTTTCGACCCAGATT 58.382 47.619 0.00 0.00 0.00 2.40
61 62 2.754946 TAGCGTTTCGACCCAGATTT 57.245 45.000 0.00 0.00 0.00 2.17
62 63 1.892209 AGCGTTTCGACCCAGATTTT 58.108 45.000 0.00 0.00 0.00 1.82
63 64 2.227194 AGCGTTTCGACCCAGATTTTT 58.773 42.857 0.00 0.00 0.00 1.94
165 166 4.814147 TGTGCTCTGTCAAGATAAGTGAG 58.186 43.478 0.00 0.00 0.00 3.51
189 190 5.181433 GGTGGGATCAAAACTAGTGAAGAAC 59.819 44.000 0.00 0.00 0.00 3.01
218 219 6.257630 GTCTACTCAAAATCATCTTCTGGAGC 59.742 42.308 0.00 0.00 0.00 4.70
289 290 7.871463 AGGTGTTACTATTCAGTCAACTAACAC 59.129 37.037 11.63 11.63 42.87 3.32
324 325 3.960102 TGAAGATTGATAATTGCCCACCC 59.040 43.478 0.00 0.00 0.00 4.61
331 332 2.280308 TAATTGCCCACCCCTAGAGT 57.720 50.000 0.00 0.00 0.00 3.24
372 373 8.402798 TGCTAACCTCATTGAAGAAATTTACA 57.597 30.769 0.00 0.00 0.00 2.41
373 374 9.023962 TGCTAACCTCATTGAAGAAATTTACAT 57.976 29.630 0.00 0.00 0.00 2.29
405 406 2.556840 ATCTTGGGGTGGTGCCATCG 62.557 60.000 0.00 0.00 39.65 3.84
414 415 0.109532 TGGTGCCATCGGAAGTTGAA 59.890 50.000 0.00 0.00 32.62 2.69
415 416 1.271871 TGGTGCCATCGGAAGTTGAAT 60.272 47.619 0.00 0.00 32.62 2.57
454 455 5.049612 CAGCATCCTATTGAGTGCATTAGTG 60.050 44.000 0.00 0.00 39.94 2.74
465 466 3.009473 AGTGCATTAGTGTTGGATGGTCT 59.991 43.478 0.00 0.00 0.00 3.85
466 467 3.127548 GTGCATTAGTGTTGGATGGTCTG 59.872 47.826 0.00 0.00 0.00 3.51
467 468 2.684881 GCATTAGTGTTGGATGGTCTGG 59.315 50.000 0.00 0.00 0.00 3.86
508 509 2.437625 ACGCAGTTCCTGTACCACT 58.562 52.632 0.00 0.00 37.78 4.00
517 518 2.414612 TCCTGTACCACTTCCCAAAGT 58.585 47.619 0.00 0.00 46.80 2.66
528 529 4.081697 CACTTCCCAAAGTTGTCCAAACTT 60.082 41.667 0.00 0.00 43.28 2.66
563 564 5.906113 TGTGAAAACATAACACAGTTGGT 57.094 34.783 0.00 0.00 39.17 3.67
603 607 3.326588 AGCAACCAACATCACCAGTAGTA 59.673 43.478 0.00 0.00 0.00 1.82
606 610 5.487433 CAACCAACATCACCAGTAGTATCA 58.513 41.667 0.00 0.00 0.00 2.15
607 611 5.957771 ACCAACATCACCAGTAGTATCAT 57.042 39.130 0.00 0.00 0.00 2.45
608 612 5.674525 ACCAACATCACCAGTAGTATCATG 58.325 41.667 0.00 0.00 0.00 3.07
609 613 5.059161 CCAACATCACCAGTAGTATCATGG 58.941 45.833 0.00 0.00 40.10 3.66
611 615 5.537300 ACATCACCAGTAGTATCATGGTC 57.463 43.478 0.00 0.00 45.52 4.02
612 616 4.962362 ACATCACCAGTAGTATCATGGTCA 59.038 41.667 0.00 0.00 45.52 4.02
613 617 5.425217 ACATCACCAGTAGTATCATGGTCAA 59.575 40.000 0.00 0.00 45.52 3.18
614 618 5.339008 TCACCAGTAGTATCATGGTCAAC 57.661 43.478 0.00 0.00 45.52 3.18
615 619 4.161565 TCACCAGTAGTATCATGGTCAACC 59.838 45.833 0.00 0.00 45.52 3.77
616 620 4.162320 CACCAGTAGTATCATGGTCAACCT 59.838 45.833 0.10 0.00 45.52 3.50
617 621 4.406003 ACCAGTAGTATCATGGTCAACCTC 59.594 45.833 0.10 0.00 43.94 3.85
618 622 4.651503 CCAGTAGTATCATGGTCAACCTCT 59.348 45.833 0.10 0.00 36.82 3.69
619 623 5.129485 CCAGTAGTATCATGGTCAACCTCTT 59.871 44.000 0.10 0.00 36.82 2.85
620 624 6.352222 CCAGTAGTATCATGGTCAACCTCTTT 60.352 42.308 0.10 0.00 36.82 2.52
621 625 7.147724 CCAGTAGTATCATGGTCAACCTCTTTA 60.148 40.741 0.10 0.00 36.82 1.85
622 626 7.923344 CAGTAGTATCATGGTCAACCTCTTTAG 59.077 40.741 0.10 0.00 36.82 1.85
623 627 7.839705 AGTAGTATCATGGTCAACCTCTTTAGA 59.160 37.037 0.10 0.00 36.82 2.10
624 628 7.682787 AGTATCATGGTCAACCTCTTTAGAT 57.317 36.000 0.10 0.00 36.82 1.98
625 629 7.504403 AGTATCATGGTCAACCTCTTTAGATG 58.496 38.462 0.10 0.00 36.82 2.90
626 630 5.762179 TCATGGTCAACCTCTTTAGATGT 57.238 39.130 0.10 0.00 36.82 3.06
627 631 6.126863 TCATGGTCAACCTCTTTAGATGTT 57.873 37.500 0.10 0.00 34.06 2.71
628 632 6.542821 TCATGGTCAACCTCTTTAGATGTTT 58.457 36.000 0.10 0.00 31.96 2.83
629 633 7.004086 TCATGGTCAACCTCTTTAGATGTTTT 58.996 34.615 0.10 0.00 31.96 2.43
630 634 6.877611 TGGTCAACCTCTTTAGATGTTTTC 57.122 37.500 0.10 0.00 31.96 2.29
631 635 6.601332 TGGTCAACCTCTTTAGATGTTTTCT 58.399 36.000 0.10 0.00 36.27 2.52
632 636 7.060421 TGGTCAACCTCTTTAGATGTTTTCTT 58.940 34.615 0.10 0.00 34.80 2.52
633 637 7.559897 TGGTCAACCTCTTTAGATGTTTTCTTT 59.440 33.333 0.10 0.00 34.80 2.52
634 638 8.414003 GGTCAACCTCTTTAGATGTTTTCTTTT 58.586 33.333 0.00 0.00 35.79 2.27
635 639 9.452065 GTCAACCTCTTTAGATGTTTTCTTTTC 57.548 33.333 0.00 0.00 35.79 2.29
636 640 8.342634 TCAACCTCTTTAGATGTTTTCTTTTCG 58.657 33.333 0.00 0.00 35.79 3.46
637 641 7.803279 ACCTCTTTAGATGTTTTCTTTTCGT 57.197 32.000 0.00 0.00 35.79 3.85
638 642 8.221965 ACCTCTTTAGATGTTTTCTTTTCGTT 57.778 30.769 0.00 0.00 35.79 3.85
639 643 8.683615 ACCTCTTTAGATGTTTTCTTTTCGTTT 58.316 29.630 0.00 0.00 35.79 3.60
640 644 9.516314 CCTCTTTAGATGTTTTCTTTTCGTTTT 57.484 29.630 0.00 0.00 35.79 2.43
646 650 8.980143 AGATGTTTTCTTTTCGTTTTTGAGAA 57.020 26.923 0.00 0.00 0.00 2.87
647 651 9.418045 AGATGTTTTCTTTTCGTTTTTGAGAAA 57.582 25.926 0.00 0.00 35.29 2.52
648 652 9.675553 GATGTTTTCTTTTCGTTTTTGAGAAAG 57.324 29.630 0.00 0.00 37.56 2.62
649 653 8.582433 TGTTTTCTTTTCGTTTTTGAGAAAGT 57.418 26.923 0.00 0.00 37.56 2.66
650 654 8.484008 TGTTTTCTTTTCGTTTTTGAGAAAGTG 58.516 29.630 0.00 0.00 37.56 3.16
651 655 6.626199 TTCTTTTCGTTTTTGAGAAAGTGC 57.374 33.333 0.00 0.00 37.61 4.40
652 656 5.704888 TCTTTTCGTTTTTGAGAAAGTGCA 58.295 33.333 0.00 0.00 37.61 4.57
653 657 6.153067 TCTTTTCGTTTTTGAGAAAGTGCAA 58.847 32.000 0.00 0.00 37.61 4.08
654 658 6.642950 TCTTTTCGTTTTTGAGAAAGTGCAAA 59.357 30.769 0.00 0.00 37.61 3.68
655 659 6.771188 TTTCGTTTTTGAGAAAGTGCAAAA 57.229 29.167 0.00 0.00 40.89 2.44
656 660 6.388259 TTCGTTTTTGAGAAAGTGCAAAAG 57.612 33.333 0.00 0.00 42.71 2.27
657 661 4.326009 TCGTTTTTGAGAAAGTGCAAAAGC 59.674 37.500 0.00 0.00 42.71 3.51
658 662 4.327087 CGTTTTTGAGAAAGTGCAAAAGCT 59.673 37.500 0.00 0.00 42.71 3.74
659 663 5.163963 CGTTTTTGAGAAAGTGCAAAAGCTT 60.164 36.000 0.00 0.00 42.71 3.74
660 664 6.602179 GTTTTTGAGAAAGTGCAAAAGCTTT 58.398 32.000 5.69 5.69 42.71 3.51
661 665 5.783100 TTTGAGAAAGTGCAAAAGCTTTG 57.217 34.783 13.54 8.26 35.35 2.77
662 666 4.454728 TGAGAAAGTGCAAAAGCTTTGT 57.545 36.364 13.54 1.28 35.35 2.83
663 667 4.175516 TGAGAAAGTGCAAAAGCTTTGTG 58.824 39.130 13.54 13.62 35.35 3.33
664 668 4.176271 GAGAAAGTGCAAAAGCTTTGTGT 58.824 39.130 13.54 0.00 35.35 3.72
665 669 4.176271 AGAAAGTGCAAAAGCTTTGTGTC 58.824 39.130 13.54 9.68 35.35 3.67
666 670 3.874392 AAGTGCAAAAGCTTTGTGTCT 57.126 38.095 13.54 11.95 0.00 3.41
667 671 3.427161 AGTGCAAAAGCTTTGTGTCTC 57.573 42.857 13.54 9.80 0.00 3.36
668 672 2.111756 GTGCAAAAGCTTTGTGTCTCG 58.888 47.619 13.54 0.00 0.00 4.04
669 673 1.742831 TGCAAAAGCTTTGTGTCTCGT 59.257 42.857 13.54 0.00 0.00 4.18
670 674 2.163412 TGCAAAAGCTTTGTGTCTCGTT 59.837 40.909 13.54 0.00 0.00 3.85
671 675 2.531508 GCAAAAGCTTTGTGTCTCGTTG 59.468 45.455 13.54 4.93 0.00 4.10
672 676 3.758300 CAAAAGCTTTGTGTCTCGTTGT 58.242 40.909 13.54 0.00 0.00 3.32
673 677 4.729458 GCAAAAGCTTTGTGTCTCGTTGTA 60.729 41.667 13.54 0.00 0.00 2.41
674 678 5.510671 CAAAAGCTTTGTGTCTCGTTGTAT 58.489 37.500 13.54 0.00 0.00 2.29
675 679 5.751243 AAAGCTTTGTGTCTCGTTGTATT 57.249 34.783 11.80 0.00 0.00 1.89
676 680 4.732285 AGCTTTGTGTCTCGTTGTATTG 57.268 40.909 0.00 0.00 0.00 1.90
677 681 4.377021 AGCTTTGTGTCTCGTTGTATTGA 58.623 39.130 0.00 0.00 0.00 2.57
678 682 4.814234 AGCTTTGTGTCTCGTTGTATTGAA 59.186 37.500 0.00 0.00 0.00 2.69
679 683 5.295787 AGCTTTGTGTCTCGTTGTATTGAAA 59.704 36.000 0.00 0.00 0.00 2.69
680 684 5.621228 GCTTTGTGTCTCGTTGTATTGAAAG 59.379 40.000 0.00 0.00 0.00 2.62
681 685 5.666969 TTGTGTCTCGTTGTATTGAAAGG 57.333 39.130 0.00 0.00 0.00 3.11
682 686 4.062293 TGTGTCTCGTTGTATTGAAAGGG 58.938 43.478 0.00 0.00 0.00 3.95
683 687 3.071479 TGTCTCGTTGTATTGAAAGGGC 58.929 45.455 0.00 0.00 0.00 5.19
684 688 3.071479 GTCTCGTTGTATTGAAAGGGCA 58.929 45.455 0.00 0.00 0.00 5.36
685 689 3.125316 GTCTCGTTGTATTGAAAGGGCAG 59.875 47.826 0.00 0.00 0.00 4.85
686 690 2.420022 CTCGTTGTATTGAAAGGGCAGG 59.580 50.000 0.00 0.00 0.00 4.85
710 714 6.310711 GGAACGTCAACCTCTTTAGATGTTAG 59.689 42.308 0.00 0.31 39.54 2.34
728 813 9.293404 AGATGTTAGAATGGATGATACAAATGG 57.707 33.333 0.00 0.00 0.00 3.16
744 829 2.623878 ATGGAGAAGATGAGCAGCAG 57.376 50.000 0.00 0.00 0.00 4.24
830 964 1.203112 TCTCTCCAACTCTCTGCAGGT 60.203 52.381 15.13 0.27 0.00 4.00
892 1029 1.077429 GCCCTCCAAGCCCTAACTG 60.077 63.158 0.00 0.00 0.00 3.16
909 1046 3.857157 ACTGCCCTTGAGTTAGACAAA 57.143 42.857 0.00 0.00 0.00 2.83
913 1050 3.084786 GCCCTTGAGTTAGACAAATGCT 58.915 45.455 0.00 0.00 0.00 3.79
914 1051 3.119708 GCCCTTGAGTTAGACAAATGCTG 60.120 47.826 0.00 0.00 0.00 4.41
915 1052 3.441572 CCCTTGAGTTAGACAAATGCTGG 59.558 47.826 0.00 0.00 0.00 4.85
916 1053 4.074970 CCTTGAGTTAGACAAATGCTGGT 58.925 43.478 0.00 0.00 0.00 4.00
917 1054 4.520492 CCTTGAGTTAGACAAATGCTGGTT 59.480 41.667 0.00 0.00 0.00 3.67
918 1055 5.705441 CCTTGAGTTAGACAAATGCTGGTTA 59.295 40.000 0.00 0.00 0.00 2.85
919 1056 6.128172 CCTTGAGTTAGACAAATGCTGGTTAG 60.128 42.308 0.00 0.00 0.00 2.34
930 1067 2.200373 GCTGGTTAGCCTCCTTTTCA 57.800 50.000 0.00 0.00 44.33 2.69
936 1073 5.010282 TGGTTAGCCTCCTTTTCATCTTTC 58.990 41.667 0.00 0.00 35.27 2.62
960 1097 1.002533 CCCTTTCCCGTCCTCCCTA 59.997 63.158 0.00 0.00 0.00 3.53
963 1100 1.569653 CTTTCCCGTCCTCCCTACTT 58.430 55.000 0.00 0.00 0.00 2.24
977 1115 2.093447 CCCTACTTGACCTGCACCTTAG 60.093 54.545 0.00 0.00 0.00 2.18
1030 1177 3.321497 CTTTCAAACCTCACCTCTCTCG 58.679 50.000 0.00 0.00 0.00 4.04
1233 1582 2.092375 TCTCGAGACAGATGAGGCCTTA 60.092 50.000 12.08 1.66 0.00 2.69
1234 1583 2.890311 CTCGAGACAGATGAGGCCTTAT 59.110 50.000 10.33 10.33 0.00 1.73
1238 1587 3.549794 AGACAGATGAGGCCTTATTTGC 58.450 45.455 23.40 16.99 0.00 3.68
1240 1589 1.605710 CAGATGAGGCCTTATTTGCGG 59.394 52.381 14.16 0.00 0.00 5.69
1251 1600 3.947834 CCTTATTTGCGGACCAAGAGATT 59.052 43.478 0.00 0.00 34.34 2.40
1287 1636 1.377856 GCAGGAGGAGGCCTTTCAC 60.378 63.158 6.77 0.87 35.66 3.18
1289 1638 1.151810 AGGAGGAGGCCTTTCACCA 60.152 57.895 6.77 0.00 33.46 4.17
1306 1655 3.386237 ACCTCACCTCGCTCCAGC 61.386 66.667 0.00 0.00 37.78 4.85
1311 1660 2.031516 CACCTCGCTCCAGCAACTG 61.032 63.158 0.00 0.00 42.21 3.16
1312 1661 2.210013 ACCTCGCTCCAGCAACTGA 61.210 57.895 0.00 0.00 42.21 3.41
1323 1672 2.575532 CAGCAACTGAGGTTTTGGAGA 58.424 47.619 0.00 0.00 32.44 3.71
1377 1726 0.752743 ACAAGCTGCAGCACCTCAAA 60.753 50.000 38.24 0.00 45.16 2.69
1425 1777 4.697756 CGGTCGCTGCCCAAGGAA 62.698 66.667 0.00 0.00 0.00 3.36
1459 1811 6.487960 AGTTCACTACGAGAATTAGATGTCG 58.512 40.000 0.00 0.00 38.40 4.35
1470 1822 1.399714 TAGATGTCGAGGATTGCGGT 58.600 50.000 0.00 0.00 0.00 5.68
1472 1824 1.067212 AGATGTCGAGGATTGCGGTAC 59.933 52.381 0.00 0.00 0.00 3.34
1474 1826 1.252215 TGTCGAGGATTGCGGTACCA 61.252 55.000 13.54 0.00 0.00 3.25
1499 1851 1.516161 CTAACAGAGCACTGCAAGCA 58.484 50.000 11.37 0.00 46.95 3.91
1505 1857 3.057736 ACAGAGCACTGCAAGCAATTAAG 60.058 43.478 11.37 0.54 46.95 1.85
1536 1888 6.406370 CATCCCAAAAGTCACACTATAGACA 58.594 40.000 6.78 0.00 37.23 3.41
1548 1903 7.707035 GTCACACTATAGACAAATCCAAGGTAG 59.293 40.741 6.78 0.00 34.93 3.18
1576 1937 4.985538 ACTTTCTTGCTCTACCAATTCCA 58.014 39.130 0.00 0.00 0.00 3.53
1577 1938 5.385198 ACTTTCTTGCTCTACCAATTCCAA 58.615 37.500 0.00 0.00 0.00 3.53
1587 1948 6.449635 TCTACCAATTCCAAATTTCCATCG 57.550 37.500 0.00 0.00 0.00 3.84
1597 1958 6.428295 TCCAAATTTCCATCGTTACCCTTAT 58.572 36.000 0.00 0.00 0.00 1.73
1598 1959 6.320164 TCCAAATTTCCATCGTTACCCTTATG 59.680 38.462 0.00 0.00 0.00 1.90
1627 1992 1.525923 CTGATCCCACAGGCTCCAG 59.474 63.158 0.00 0.00 34.64 3.86
1636 2003 1.471684 CACAGGCTCCAGCTCATTTTC 59.528 52.381 0.00 0.00 41.70 2.29
1641 2008 2.564504 GGCTCCAGCTCATTTTCCTTTT 59.435 45.455 0.00 0.00 41.70 2.27
1647 2014 5.104569 TCCAGCTCATTTTCCTTTTGGTTTT 60.105 36.000 0.00 0.00 41.38 2.43
1648 2015 5.589855 CCAGCTCATTTTCCTTTTGGTTTTT 59.410 36.000 0.00 0.00 41.38 1.94
1658 2025 6.860790 TCCTTTTGGTTTTTCTTACCTTGT 57.139 33.333 0.00 0.00 41.38 3.16
1671 2062 9.953565 TTTTCTTACCTTGTTACTGCATATACT 57.046 29.630 0.00 0.00 0.00 2.12
1690 2081 1.117749 TGTGCAGCTGGTCTCTCTGT 61.118 55.000 17.12 0.00 0.00 3.41
1694 2085 1.001860 GCAGCTGGTCTCTCTGTCTTT 59.998 52.381 17.12 0.00 0.00 2.52
1702 2093 4.893524 TGGTCTCTCTGTCTTTGAGTTGTA 59.106 41.667 0.00 0.00 33.59 2.41
1709 2100 8.178313 TCTCTGTCTTTGAGTTGTACATTCTA 57.822 34.615 0.00 0.00 33.59 2.10
1711 2102 6.861572 TCTGTCTTTGAGTTGTACATTCTACG 59.138 38.462 0.00 0.00 0.00 3.51
1714 2105 6.862090 GTCTTTGAGTTGTACATTCTACGAGT 59.138 38.462 0.00 0.00 0.00 4.18
1778 2169 3.756963 GGTCCTGTGTGGTATTTTCTTCC 59.243 47.826 0.00 0.00 37.07 3.46
1784 2175 4.992319 TGTGTGGTATTTTCTTCCTGTACG 59.008 41.667 0.00 0.00 0.00 3.67
1787 2178 6.646240 GTGTGGTATTTTCTTCCTGTACGTAA 59.354 38.462 0.00 0.00 0.00 3.18
1795 2186 5.068234 TCTTCCTGTACGTAAATCTGGTG 57.932 43.478 0.00 0.00 0.00 4.17
1800 2191 5.889853 TCCTGTACGTAAATCTGGTGAGTAT 59.110 40.000 0.00 0.00 0.00 2.12
1807 2198 6.701841 ACGTAAATCTGGTGAGTATATGCAAG 59.298 38.462 0.00 0.00 0.00 4.01
1808 2199 6.923508 CGTAAATCTGGTGAGTATATGCAAGA 59.076 38.462 0.00 0.00 0.00 3.02
1809 2200 7.600375 CGTAAATCTGGTGAGTATATGCAAGAT 59.400 37.037 0.00 0.00 0.00 2.40
1811 2202 5.219343 TCTGGTGAGTATATGCAAGATGG 57.781 43.478 0.00 0.00 0.00 3.51
1812 2203 4.901250 TCTGGTGAGTATATGCAAGATGGA 59.099 41.667 0.00 0.00 0.00 3.41
1813 2204 5.011431 TCTGGTGAGTATATGCAAGATGGAG 59.989 44.000 0.00 0.00 0.00 3.86
1814 2205 4.655649 TGGTGAGTATATGCAAGATGGAGT 59.344 41.667 0.00 0.00 0.00 3.85
1815 2206 5.130975 TGGTGAGTATATGCAAGATGGAGTT 59.869 40.000 0.00 0.00 0.00 3.01
1816 2207 6.058183 GGTGAGTATATGCAAGATGGAGTTT 58.942 40.000 0.00 0.00 0.00 2.66
1817 2208 6.017605 GGTGAGTATATGCAAGATGGAGTTTG 60.018 42.308 0.00 0.00 0.00 2.93
1826 2217 5.713025 GCAAGATGGAGTTTGCTATTTTGA 58.287 37.500 2.22 0.00 44.70 2.69
1829 2220 7.373493 CAAGATGGAGTTTGCTATTTTGACTT 58.627 34.615 0.00 0.00 0.00 3.01
1830 2221 8.514594 CAAGATGGAGTTTGCTATTTTGACTTA 58.485 33.333 0.00 0.00 0.00 2.24
1831 2222 8.814038 AGATGGAGTTTGCTATTTTGACTTAT 57.186 30.769 0.00 0.00 0.00 1.73
1832 2223 9.247861 AGATGGAGTTTGCTATTTTGACTTATT 57.752 29.630 0.00 0.00 0.00 1.40
1860 2251 7.553881 TGCTACTTCATTTTCTATAGGTTGC 57.446 36.000 0.00 1.13 0.00 4.17
1861 2252 6.542370 TGCTACTTCATTTTCTATAGGTTGCC 59.458 38.462 0.00 0.00 0.00 4.52
1862 2253 6.542370 GCTACTTCATTTTCTATAGGTTGCCA 59.458 38.462 0.00 0.00 0.00 4.92
1863 2254 7.229506 GCTACTTCATTTTCTATAGGTTGCCAT 59.770 37.037 0.00 0.00 0.00 4.40
1864 2255 7.961326 ACTTCATTTTCTATAGGTTGCCATT 57.039 32.000 0.00 0.00 0.00 3.16
1865 2256 7.775120 ACTTCATTTTCTATAGGTTGCCATTG 58.225 34.615 0.00 0.00 0.00 2.82
1866 2257 7.397192 ACTTCATTTTCTATAGGTTGCCATTGT 59.603 33.333 0.00 0.00 0.00 2.71
1867 2258 7.716799 TCATTTTCTATAGGTTGCCATTGTT 57.283 32.000 0.00 0.00 0.00 2.83
1868 2259 7.771183 TCATTTTCTATAGGTTGCCATTGTTC 58.229 34.615 0.00 0.00 0.00 3.18
1869 2260 7.615365 TCATTTTCTATAGGTTGCCATTGTTCT 59.385 33.333 0.00 0.00 0.00 3.01
1870 2261 7.775053 TTTTCTATAGGTTGCCATTGTTCTT 57.225 32.000 0.00 0.00 0.00 2.52
1871 2262 7.775053 TTTCTATAGGTTGCCATTGTTCTTT 57.225 32.000 0.00 0.00 0.00 2.52
1872 2263 8.871629 TTTCTATAGGTTGCCATTGTTCTTTA 57.128 30.769 0.00 0.00 0.00 1.85
1873 2264 7.859325 TCTATAGGTTGCCATTGTTCTTTAC 57.141 36.000 0.00 0.00 0.00 2.01
1874 2265 7.398829 TCTATAGGTTGCCATTGTTCTTTACA 58.601 34.615 0.00 0.00 34.12 2.41
1875 2266 4.853924 AGGTTGCCATTGTTCTTTACAG 57.146 40.909 0.00 0.00 38.19 2.74
1876 2267 3.005791 AGGTTGCCATTGTTCTTTACAGC 59.994 43.478 0.00 0.00 38.19 4.40
1877 2268 3.005791 GGTTGCCATTGTTCTTTACAGCT 59.994 43.478 0.00 0.00 38.19 4.24
1878 2269 4.501400 GGTTGCCATTGTTCTTTACAGCTT 60.501 41.667 0.00 0.00 38.19 3.74
1879 2270 4.935352 TGCCATTGTTCTTTACAGCTTT 57.065 36.364 0.00 0.00 38.19 3.51
1880 2271 5.275067 TGCCATTGTTCTTTACAGCTTTT 57.725 34.783 0.00 0.00 38.19 2.27
1881 2272 5.288804 TGCCATTGTTCTTTACAGCTTTTC 58.711 37.500 0.00 0.00 38.19 2.29
1882 2273 4.686091 GCCATTGTTCTTTACAGCTTTTCC 59.314 41.667 0.00 0.00 38.19 3.13
1883 2274 5.738783 GCCATTGTTCTTTACAGCTTTTCCA 60.739 40.000 0.00 0.00 38.19 3.53
1884 2275 5.691754 CCATTGTTCTTTACAGCTTTTCCAC 59.308 40.000 0.00 0.00 38.19 4.02
1885 2276 6.461509 CCATTGTTCTTTACAGCTTTTCCACT 60.462 38.462 0.00 0.00 38.19 4.00
1886 2277 6.524101 TTGTTCTTTACAGCTTTTCCACTT 57.476 33.333 0.00 0.00 38.19 3.16
1887 2278 6.524101 TGTTCTTTACAGCTTTTCCACTTT 57.476 33.333 0.00 0.00 31.68 2.66
1888 2279 6.560711 TGTTCTTTACAGCTTTTCCACTTTC 58.439 36.000 0.00 0.00 31.68 2.62
1889 2280 6.151985 TGTTCTTTACAGCTTTTCCACTTTCA 59.848 34.615 0.00 0.00 31.68 2.69
1890 2281 6.377327 TCTTTACAGCTTTTCCACTTTCAG 57.623 37.500 0.00 0.00 0.00 3.02
1891 2282 4.568152 TTACAGCTTTTCCACTTTCAGC 57.432 40.909 0.00 0.00 0.00 4.26
1892 2283 1.683385 ACAGCTTTTCCACTTTCAGCC 59.317 47.619 0.00 0.00 0.00 4.85
1893 2284 0.954452 AGCTTTTCCACTTTCAGCCG 59.046 50.000 0.00 0.00 0.00 5.52
1894 2285 0.664466 GCTTTTCCACTTTCAGCCGC 60.664 55.000 0.00 0.00 0.00 6.53
1895 2286 0.667993 CTTTTCCACTTTCAGCCGCA 59.332 50.000 0.00 0.00 0.00 5.69
1896 2287 1.270550 CTTTTCCACTTTCAGCCGCAT 59.729 47.619 0.00 0.00 0.00 4.73
1897 2288 2.192664 TTTCCACTTTCAGCCGCATA 57.807 45.000 0.00 0.00 0.00 3.14
1898 2289 2.418368 TTCCACTTTCAGCCGCATAT 57.582 45.000 0.00 0.00 0.00 1.78
1899 2290 1.667236 TCCACTTTCAGCCGCATATG 58.333 50.000 0.00 0.00 0.00 1.78
1900 2291 0.664761 CCACTTTCAGCCGCATATGG 59.335 55.000 4.56 0.00 0.00 2.74
1901 2292 0.664761 CACTTTCAGCCGCATATGGG 59.335 55.000 12.66 12.66 0.00 4.00
1902 2293 0.255890 ACTTTCAGCCGCATATGGGT 59.744 50.000 17.56 0.00 41.33 4.51
1903 2294 1.488812 ACTTTCAGCCGCATATGGGTA 59.511 47.619 17.56 0.00 37.73 3.69
1904 2295 2.092646 ACTTTCAGCCGCATATGGGTAA 60.093 45.455 17.56 4.89 37.73 2.85
1905 2296 2.949177 TTCAGCCGCATATGGGTAAT 57.051 45.000 17.56 1.50 37.73 1.89
1906 2297 2.949177 TCAGCCGCATATGGGTAATT 57.051 45.000 17.56 0.00 37.73 1.40
1907 2298 2.778299 TCAGCCGCATATGGGTAATTC 58.222 47.619 17.56 2.94 37.73 2.17
1908 2299 1.812571 CAGCCGCATATGGGTAATTCC 59.187 52.381 17.56 0.72 37.73 3.01
1909 2300 1.423541 AGCCGCATATGGGTAATTCCA 59.576 47.619 17.56 0.00 38.14 3.53
1910 2301 1.812571 GCCGCATATGGGTAATTCCAG 59.187 52.381 17.56 2.15 40.56 3.86
1911 2302 1.812571 CCGCATATGGGTAATTCCAGC 59.187 52.381 17.56 0.00 40.56 4.85
1912 2303 1.812571 CGCATATGGGTAATTCCAGCC 59.187 52.381 11.48 0.00 40.56 4.85
1913 2304 2.171003 GCATATGGGTAATTCCAGCCC 58.829 52.381 4.56 0.00 40.56 5.19
1918 2309 1.931635 GGGTAATTCCAGCCCAAACA 58.068 50.000 0.00 0.00 41.93 2.83
1919 2310 2.252714 GGGTAATTCCAGCCCAAACAA 58.747 47.619 0.00 0.00 41.93 2.83
1920 2311 2.635427 GGGTAATTCCAGCCCAAACAAA 59.365 45.455 0.00 0.00 41.93 2.83
1921 2312 3.263170 GGGTAATTCCAGCCCAAACAAAT 59.737 43.478 0.00 0.00 41.93 2.32
1922 2313 4.263287 GGGTAATTCCAGCCCAAACAAATT 60.263 41.667 0.00 0.00 41.93 1.82
1923 2314 4.935205 GGTAATTCCAGCCCAAACAAATTC 59.065 41.667 0.00 0.00 35.97 2.17
1924 2315 4.703379 AATTCCAGCCCAAACAAATTCA 57.297 36.364 0.00 0.00 0.00 2.57
1925 2316 4.914177 ATTCCAGCCCAAACAAATTCAT 57.086 36.364 0.00 0.00 0.00 2.57
1926 2317 3.681593 TCCAGCCCAAACAAATTCATG 57.318 42.857 0.00 0.00 0.00 3.07
1927 2318 3.237746 TCCAGCCCAAACAAATTCATGA 58.762 40.909 0.00 0.00 0.00 3.07
1928 2319 3.006752 TCCAGCCCAAACAAATTCATGAC 59.993 43.478 0.00 0.00 0.00 3.06
1929 2320 3.244146 CCAGCCCAAACAAATTCATGACA 60.244 43.478 0.00 0.00 0.00 3.58
1930 2321 4.563993 CCAGCCCAAACAAATTCATGACAT 60.564 41.667 0.00 0.00 0.00 3.06
1931 2322 4.628333 CAGCCCAAACAAATTCATGACATC 59.372 41.667 0.00 0.00 0.00 3.06
1932 2323 4.529377 AGCCCAAACAAATTCATGACATCT 59.471 37.500 0.00 0.00 0.00 2.90
1933 2324 5.012354 AGCCCAAACAAATTCATGACATCTT 59.988 36.000 0.00 0.00 0.00 2.40
1934 2325 6.211184 AGCCCAAACAAATTCATGACATCTTA 59.789 34.615 0.00 0.00 0.00 2.10
1935 2326 7.043565 GCCCAAACAAATTCATGACATCTTAT 58.956 34.615 0.00 0.00 0.00 1.73
1948 2339 9.480053 TCATGACATCTTATATATGTGTGTGTG 57.520 33.333 6.08 10.23 37.69 3.82
1949 2340 9.480053 CATGACATCTTATATATGTGTGTGTGA 57.520 33.333 6.08 0.00 37.69 3.58
1959 2350 8.718102 ATATATGTGTGTGTGAAAAGTACCTC 57.282 34.615 0.00 0.00 0.00 3.85
1960 2351 4.209307 TGTGTGTGTGAAAAGTACCTCA 57.791 40.909 0.00 0.00 0.00 3.86
1963 2354 5.650266 TGTGTGTGTGAAAAGTACCTCATTT 59.350 36.000 0.00 0.00 0.00 2.32
1965 2356 6.472163 GTGTGTGTGAAAAGTACCTCATTTTG 59.528 38.462 0.00 0.00 0.00 2.44
1966 2357 6.151985 TGTGTGTGAAAAGTACCTCATTTTGT 59.848 34.615 0.00 0.00 0.00 2.83
1967 2358 7.033185 GTGTGTGAAAAGTACCTCATTTTGTT 58.967 34.615 0.00 0.00 0.00 2.83
1968 2359 8.185505 GTGTGTGAAAAGTACCTCATTTTGTTA 58.814 33.333 0.00 0.00 0.00 2.41
1969 2360 8.908903 TGTGTGAAAAGTACCTCATTTTGTTAT 58.091 29.630 0.00 0.00 0.00 1.89
1970 2361 9.744468 GTGTGAAAAGTACCTCATTTTGTTATT 57.256 29.630 0.00 0.00 0.00 1.40
2000 2393 9.855361 CTGATAAAATTGTCTGCGTTCTATTAG 57.145 33.333 0.00 0.00 0.00 1.73
2010 2403 8.653338 TGTCTGCGTTCTATTAGTTTAAATCAC 58.347 33.333 0.00 0.00 0.00 3.06
2012 2405 9.431887 TCTGCGTTCTATTAGTTTAAATCACTT 57.568 29.630 0.00 0.00 0.00 3.16
2027 2420 1.010419 CACTTTTCTTGGGCGCATGC 61.010 55.000 10.83 7.91 41.71 4.06
2032 2425 0.038343 TTCTTGGGCGCATGCTTTTC 60.038 50.000 17.13 3.29 42.25 2.29
2037 2430 1.547820 TGGGCGCATGCTTTTCATTAA 59.452 42.857 17.13 0.00 42.25 1.40
2038 2431 2.168106 TGGGCGCATGCTTTTCATTAAT 59.832 40.909 17.13 0.00 42.25 1.40
2042 2435 6.071447 TGGGCGCATGCTTTTCATTAATATAT 60.071 34.615 17.13 0.00 42.25 0.86
2080 2473 3.118531 ACTGAAGGGCCTGTCTATTCAT 58.881 45.455 6.92 0.00 30.13 2.57
2083 2476 4.526970 TGAAGGGCCTGTCTATTCATTTC 58.473 43.478 6.92 0.00 0.00 2.17
2084 2477 4.018506 TGAAGGGCCTGTCTATTCATTTCA 60.019 41.667 6.92 0.00 0.00 2.69
2088 2481 5.960202 AGGGCCTGTCTATTCATTTCAAAAT 59.040 36.000 4.50 0.00 0.00 1.82
2141 2534 4.543590 TTGTCTTGTTTCCTTTTTGGCA 57.456 36.364 0.00 0.00 35.26 4.92
2145 2538 4.686091 GTCTTGTTTCCTTTTTGGCATAGC 59.314 41.667 0.00 0.00 35.26 2.97
2146 2539 3.296322 TGTTTCCTTTTTGGCATAGCG 57.704 42.857 0.00 0.00 35.26 4.26
2147 2540 2.887783 TGTTTCCTTTTTGGCATAGCGA 59.112 40.909 0.00 0.00 35.26 4.93
2150 2543 3.848272 TCCTTTTTGGCATAGCGAAAG 57.152 42.857 0.00 2.84 37.52 2.62
2152 2545 3.190535 TCCTTTTTGGCATAGCGAAAGAC 59.809 43.478 10.57 0.00 37.52 3.01
2155 2548 5.447818 CCTTTTTGGCATAGCGAAAGACTAG 60.448 44.000 10.57 0.00 37.52 2.57
2156 2549 3.887621 TTGGCATAGCGAAAGACTAGT 57.112 42.857 0.00 0.00 0.00 2.57
2157 2550 3.887621 TGGCATAGCGAAAGACTAGTT 57.112 42.857 0.00 0.00 0.00 2.24
2158 2551 4.994907 TGGCATAGCGAAAGACTAGTTA 57.005 40.909 0.00 0.00 0.00 2.24
2159 2552 5.531122 TGGCATAGCGAAAGACTAGTTAT 57.469 39.130 0.00 0.00 0.00 1.89
2160 2553 5.914033 TGGCATAGCGAAAGACTAGTTATT 58.086 37.500 0.00 0.00 0.00 1.40
2161 2554 6.346096 TGGCATAGCGAAAGACTAGTTATTT 58.654 36.000 0.00 1.53 0.00 1.40
2162 2555 7.494211 TGGCATAGCGAAAGACTAGTTATTTA 58.506 34.615 0.00 0.00 0.00 1.40
2164 2557 8.989980 GGCATAGCGAAAGACTAGTTATTTATT 58.010 33.333 0.00 0.00 0.00 1.40
2199 2709 8.477984 TGCTACTTGCCAATGAAAAATTTATC 57.522 30.769 0.00 0.00 42.00 1.75
2204 2714 9.301153 ACTTGCCAATGAAAAATTTATCGATAC 57.699 29.630 4.16 0.00 0.00 2.24
2205 2715 7.906611 TGCCAATGAAAAATTTATCGATACG 57.093 32.000 4.16 0.00 0.00 3.06
2207 2717 7.430793 TGCCAATGAAAAATTTATCGATACGTG 59.569 33.333 4.16 0.00 0.00 4.49
2220 2773 5.816449 TCGATACGTGTAAGGTATTCACA 57.184 39.130 0.00 0.00 46.79 3.58
2221 2774 6.381481 TCGATACGTGTAAGGTATTCACAT 57.619 37.500 0.00 0.00 46.79 3.21
2224 2777 7.221259 TCGATACGTGTAAGGTATTCACATTTG 59.779 37.037 0.00 0.00 46.79 2.32
2225 2778 7.009815 CGATACGTGTAAGGTATTCACATTTGT 59.990 37.037 0.00 0.00 46.79 2.83
2229 2782 7.858879 ACGTGTAAGGTATTCACATTTGTTTTC 59.141 33.333 0.00 0.00 30.20 2.29
2230 2783 8.073768 CGTGTAAGGTATTCACATTTGTTTTCT 58.926 33.333 0.00 0.00 30.00 2.52
2231 2784 9.394477 GTGTAAGGTATTCACATTTGTTTTCTC 57.606 33.333 0.00 0.00 30.00 2.87
2235 2788 8.181904 AGGTATTCACATTTGTTTTCTCATGT 57.818 30.769 0.00 0.00 0.00 3.21
2237 2790 8.915654 GGTATTCACATTTGTTTTCTCATGTTC 58.084 33.333 0.00 0.00 0.00 3.18
2240 2793 7.099266 TCACATTTGTTTTCTCATGTTCTGT 57.901 32.000 0.00 0.00 0.00 3.41
2247 2800 7.639113 TGTTTTCTCATGTTCTGTAGGTTTT 57.361 32.000 0.00 0.00 0.00 2.43
2248 2801 7.703328 TGTTTTCTCATGTTCTGTAGGTTTTC 58.297 34.615 0.00 0.00 0.00 2.29
2250 2803 8.406297 GTTTTCTCATGTTCTGTAGGTTTTCTT 58.594 33.333 0.00 0.00 0.00 2.52
2251 2804 7.496529 TTCTCATGTTCTGTAGGTTTTCTTG 57.503 36.000 0.00 0.00 0.00 3.02
2252 2805 6.591935 TCTCATGTTCTGTAGGTTTTCTTGT 58.408 36.000 0.00 0.00 0.00 3.16
2253 2806 6.483307 TCTCATGTTCTGTAGGTTTTCTTGTG 59.517 38.462 0.00 0.00 0.00 3.33
2254 2807 6.119536 TCATGTTCTGTAGGTTTTCTTGTGT 58.880 36.000 0.00 0.00 0.00 3.72
2255 2808 6.601613 TCATGTTCTGTAGGTTTTCTTGTGTT 59.398 34.615 0.00 0.00 0.00 3.32
2256 2809 7.771361 TCATGTTCTGTAGGTTTTCTTGTGTTA 59.229 33.333 0.00 0.00 0.00 2.41
2257 2810 7.925043 TGTTCTGTAGGTTTTCTTGTGTTAA 57.075 32.000 0.00 0.00 0.00 2.01
2258 2811 8.514330 TGTTCTGTAGGTTTTCTTGTGTTAAT 57.486 30.769 0.00 0.00 0.00 1.40
2259 2812 8.617809 TGTTCTGTAGGTTTTCTTGTGTTAATC 58.382 33.333 0.00 0.00 0.00 1.75
2260 2813 7.739498 TCTGTAGGTTTTCTTGTGTTAATCC 57.261 36.000 0.00 0.00 0.00 3.01
2261 2814 7.514721 TCTGTAGGTTTTCTTGTGTTAATCCT 58.485 34.615 0.00 0.00 0.00 3.24
2262 2815 7.444183 TCTGTAGGTTTTCTTGTGTTAATCCTG 59.556 37.037 0.00 0.00 0.00 3.86
2263 2816 6.488683 TGTAGGTTTTCTTGTGTTAATCCTGG 59.511 38.462 0.00 0.00 0.00 4.45
2264 2817 5.454966 AGGTTTTCTTGTGTTAATCCTGGT 58.545 37.500 0.00 0.00 0.00 4.00
2265 2818 6.607019 AGGTTTTCTTGTGTTAATCCTGGTA 58.393 36.000 0.00 0.00 0.00 3.25
2266 2819 6.715264 AGGTTTTCTTGTGTTAATCCTGGTAG 59.285 38.462 0.00 0.00 0.00 3.18
2267 2820 6.072119 GGTTTTCTTGTGTTAATCCTGGTAGG 60.072 42.308 0.00 0.00 36.46 3.18
2268 2821 4.216411 TCTTGTGTTAATCCTGGTAGGC 57.784 45.455 0.00 0.00 34.61 3.93
2269 2822 3.844211 TCTTGTGTTAATCCTGGTAGGCT 59.156 43.478 0.00 0.00 34.61 4.58
2270 2823 4.288626 TCTTGTGTTAATCCTGGTAGGCTT 59.711 41.667 0.00 0.00 34.61 4.35
2271 2824 4.216411 TGTGTTAATCCTGGTAGGCTTC 57.784 45.455 0.00 0.00 34.61 3.86
2272 2825 3.844211 TGTGTTAATCCTGGTAGGCTTCT 59.156 43.478 0.00 0.00 34.61 2.85
2273 2826 4.288626 TGTGTTAATCCTGGTAGGCTTCTT 59.711 41.667 0.00 0.00 34.61 2.52
2274 2827 4.636206 GTGTTAATCCTGGTAGGCTTCTTG 59.364 45.833 0.00 0.00 34.61 3.02
2275 2828 4.288626 TGTTAATCCTGGTAGGCTTCTTGT 59.711 41.667 0.00 0.00 34.61 3.16
2276 2829 5.486063 TGTTAATCCTGGTAGGCTTCTTGTA 59.514 40.000 0.00 0.00 34.61 2.41
2277 2830 6.157994 TGTTAATCCTGGTAGGCTTCTTGTAT 59.842 38.462 0.00 0.00 34.61 2.29
2278 2831 5.717119 AATCCTGGTAGGCTTCTTGTATT 57.283 39.130 0.00 0.00 34.61 1.89
2279 2832 5.717119 ATCCTGGTAGGCTTCTTGTATTT 57.283 39.130 0.00 0.00 34.61 1.40
2280 2833 5.514500 TCCTGGTAGGCTTCTTGTATTTT 57.486 39.130 0.00 0.00 34.61 1.82
2281 2834 5.253330 TCCTGGTAGGCTTCTTGTATTTTG 58.747 41.667 0.00 0.00 34.61 2.44
2282 2835 4.142381 CCTGGTAGGCTTCTTGTATTTTGC 60.142 45.833 0.00 0.00 0.00 3.68
2283 2836 4.402829 TGGTAGGCTTCTTGTATTTTGCA 58.597 39.130 0.00 0.00 0.00 4.08
2284 2837 5.016173 TGGTAGGCTTCTTGTATTTTGCAT 58.984 37.500 0.00 0.00 0.00 3.96
2285 2838 6.184068 TGGTAGGCTTCTTGTATTTTGCATA 58.816 36.000 0.00 0.00 0.00 3.14
2286 2839 6.661377 TGGTAGGCTTCTTGTATTTTGCATAA 59.339 34.615 0.00 0.00 0.00 1.90
2287 2840 6.972901 GGTAGGCTTCTTGTATTTTGCATAAC 59.027 38.462 0.00 0.00 0.00 1.89
2288 2841 5.965922 AGGCTTCTTGTATTTTGCATAACC 58.034 37.500 0.00 0.00 0.00 2.85
2289 2842 5.480073 AGGCTTCTTGTATTTTGCATAACCA 59.520 36.000 0.00 0.00 0.00 3.67
2290 2843 5.807011 GGCTTCTTGTATTTTGCATAACCAG 59.193 40.000 0.00 0.00 0.00 4.00
2291 2844 6.389906 GCTTCTTGTATTTTGCATAACCAGT 58.610 36.000 0.00 0.00 0.00 4.00
2292 2845 7.362574 GGCTTCTTGTATTTTGCATAACCAGTA 60.363 37.037 0.00 0.00 0.00 2.74
2293 2846 7.698130 GCTTCTTGTATTTTGCATAACCAGTAG 59.302 37.037 0.00 0.00 0.00 2.57
2294 2847 7.083875 TCTTGTATTTTGCATAACCAGTAGC 57.916 36.000 0.00 0.00 0.00 3.58
2295 2848 6.884295 TCTTGTATTTTGCATAACCAGTAGCT 59.116 34.615 0.00 0.00 0.00 3.32
2296 2849 6.435430 TGTATTTTGCATAACCAGTAGCTG 57.565 37.500 0.00 0.00 0.00 4.24
2297 2850 3.848272 TTTTGCATAACCAGTAGCTGC 57.152 42.857 0.00 0.00 0.00 5.25
2298 2851 1.750193 TTGCATAACCAGTAGCTGCC 58.250 50.000 0.00 0.00 31.89 4.85
2299 2852 0.617935 TGCATAACCAGTAGCTGCCA 59.382 50.000 0.00 0.00 31.89 4.92
2300 2853 1.004161 TGCATAACCAGTAGCTGCCAA 59.996 47.619 0.00 0.00 31.89 4.52
2301 2854 2.091541 GCATAACCAGTAGCTGCCAAA 58.908 47.619 0.00 0.00 0.00 3.28
2302 2855 2.491693 GCATAACCAGTAGCTGCCAAAA 59.508 45.455 0.00 0.00 0.00 2.44
2303 2856 3.428045 GCATAACCAGTAGCTGCCAAAAG 60.428 47.826 0.00 0.00 0.00 2.27
2304 2857 2.656947 AACCAGTAGCTGCCAAAAGA 57.343 45.000 0.00 0.00 0.00 2.52
2305 2858 2.191128 ACCAGTAGCTGCCAAAAGAG 57.809 50.000 0.00 0.00 0.00 2.85
2306 2859 1.699634 ACCAGTAGCTGCCAAAAGAGA 59.300 47.619 0.00 0.00 0.00 3.10
2307 2860 2.289945 ACCAGTAGCTGCCAAAAGAGAG 60.290 50.000 0.00 0.00 0.00 3.20
2308 2861 2.027745 CCAGTAGCTGCCAAAAGAGAGA 60.028 50.000 0.00 0.00 0.00 3.10
2312 2865 4.714308 AGTAGCTGCCAAAAGAGAGATAGT 59.286 41.667 0.00 0.00 0.00 2.12
2331 2884 7.967908 AGATAGTCAAAGAAACAAGAGAAGGA 58.032 34.615 0.00 0.00 0.00 3.36
2362 2915 6.432472 AGAAAGTCCCATTTCTTCATCAAGTC 59.568 38.462 0.00 0.00 45.10 3.01
2368 2921 3.653539 TTTCTTCATCAAGTCGACGGA 57.346 42.857 10.46 12.51 0.00 4.69
2388 2941 1.065491 ACAGAGTCACACAAGGTTGCA 60.065 47.619 0.00 0.00 0.00 4.08
2389 2942 2.016318 CAGAGTCACACAAGGTTGCAA 58.984 47.619 0.00 0.00 0.00 4.08
2422 2975 6.625362 TGCAGTCTCTTCAGTATTAGTTCAG 58.375 40.000 0.00 0.00 0.00 3.02
2434 2987 2.604912 TAGTTCAGAGGAGCAGTGGA 57.395 50.000 0.00 0.00 0.00 4.02
2459 3012 2.419324 GCAGAGATTTTGCAGAGAGTGG 59.581 50.000 0.00 0.00 41.17 4.00
2460 3013 3.672808 CAGAGATTTTGCAGAGAGTGGT 58.327 45.455 0.00 0.00 0.00 4.16
2478 3033 3.248602 GTGGTAGTTTCAGAACAGTGCAG 59.751 47.826 0.00 0.00 38.26 4.41
2485 3040 4.355543 TTCAGAACAGTGCAGTTTTGAC 57.644 40.909 10.45 0.00 40.81 3.18
2492 3047 3.255642 ACAGTGCAGTTTTGACAAAGTGT 59.744 39.130 0.10 0.00 43.02 3.55
2515 3070 4.704540 TCATTTGAGTGGTGAAAACAGTGT 59.295 37.500 0.00 0.00 0.00 3.55
2518 3073 5.811399 TTGAGTGGTGAAAACAGTGTTAG 57.189 39.130 9.37 0.00 0.00 2.34
2519 3074 4.196193 TGAGTGGTGAAAACAGTGTTAGG 58.804 43.478 9.37 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 2.479901 GGGAAGCCAAAACGTCGAAAAA 60.480 45.455 0.00 0.00 0.00 1.94
10 11 1.065851 GGGAAGCCAAAACGTCGAAAA 59.934 47.619 0.00 0.00 0.00 2.29
11 12 0.664224 GGGAAGCCAAAACGTCGAAA 59.336 50.000 0.00 0.00 0.00 3.46
12 13 1.167781 GGGGAAGCCAAAACGTCGAA 61.168 55.000 0.00 0.00 0.00 3.71
13 14 1.598685 GGGGAAGCCAAAACGTCGA 60.599 57.895 0.00 0.00 0.00 4.20
14 15 2.622962 GGGGGAAGCCAAAACGTCG 61.623 63.158 0.00 0.00 0.00 5.12
15 16 2.622962 CGGGGGAAGCCAAAACGTC 61.623 63.158 0.00 0.00 0.00 4.34
16 17 2.596338 CGGGGGAAGCCAAAACGT 60.596 61.111 0.00 0.00 0.00 3.99
17 18 3.370231 CCGGGGGAAGCCAAAACG 61.370 66.667 0.00 0.00 0.00 3.60
18 19 2.203582 ACCGGGGGAAGCCAAAAC 60.204 61.111 6.32 0.00 0.00 2.43
19 20 2.014033 AAGACCGGGGGAAGCCAAAA 62.014 55.000 6.32 0.00 0.00 2.44
20 21 2.420466 GAAGACCGGGGGAAGCCAAA 62.420 60.000 6.32 0.00 0.00 3.28
21 22 2.856988 AAGACCGGGGGAAGCCAA 60.857 61.111 6.32 0.00 0.00 4.52
22 23 3.327404 GAAGACCGGGGGAAGCCA 61.327 66.667 6.32 0.00 0.00 4.75
23 24 4.111053 GGAAGACCGGGGGAAGCC 62.111 72.222 6.32 0.00 0.00 4.35
24 25 1.269703 TAAGGAAGACCGGGGGAAGC 61.270 60.000 6.32 0.00 41.83 3.86
25 26 0.831307 CTAAGGAAGACCGGGGGAAG 59.169 60.000 6.32 0.00 41.83 3.46
26 27 1.269703 GCTAAGGAAGACCGGGGGAA 61.270 60.000 6.32 0.00 41.83 3.97
27 28 1.688187 GCTAAGGAAGACCGGGGGA 60.688 63.158 6.32 0.00 41.83 4.81
28 29 2.908796 GCTAAGGAAGACCGGGGG 59.091 66.667 6.32 0.00 41.83 5.40
29 30 1.896122 AACGCTAAGGAAGACCGGGG 61.896 60.000 6.32 0.00 41.83 5.73
30 31 0.036671 AAACGCTAAGGAAGACCGGG 60.037 55.000 6.32 0.00 41.83 5.73
31 32 1.356938 GAAACGCTAAGGAAGACCGG 58.643 55.000 0.00 0.00 41.83 5.28
32 33 0.989890 CGAAACGCTAAGGAAGACCG 59.010 55.000 0.00 0.00 41.83 4.79
33 34 1.991264 GTCGAAACGCTAAGGAAGACC 59.009 52.381 0.00 0.00 0.00 3.85
34 35 1.991264 GGTCGAAACGCTAAGGAAGAC 59.009 52.381 0.00 0.00 0.00 3.01
35 36 1.067354 GGGTCGAAACGCTAAGGAAGA 60.067 52.381 0.00 0.00 35.55 2.87
36 37 1.337447 TGGGTCGAAACGCTAAGGAAG 60.337 52.381 0.00 0.00 39.03 3.46
37 38 0.680618 TGGGTCGAAACGCTAAGGAA 59.319 50.000 0.00 0.00 39.03 3.36
38 39 0.245539 CTGGGTCGAAACGCTAAGGA 59.754 55.000 0.00 0.00 39.03 3.36
39 40 0.245539 TCTGGGTCGAAACGCTAAGG 59.754 55.000 0.00 0.00 39.03 2.69
40 41 2.295253 ATCTGGGTCGAAACGCTAAG 57.705 50.000 0.00 0.00 39.03 2.18
41 42 2.754946 AATCTGGGTCGAAACGCTAA 57.245 45.000 0.00 0.00 39.03 3.09
42 43 2.754946 AAATCTGGGTCGAAACGCTA 57.245 45.000 0.00 0.00 39.03 4.26
43 44 1.892209 AAAATCTGGGTCGAAACGCT 58.108 45.000 0.00 0.00 39.03 5.07
44 45 2.699251 AAAAATCTGGGTCGAAACGC 57.301 45.000 0.00 0.00 38.75 4.84
91 92 2.310538 CAGGACTTCAGGGCACTTTTT 58.689 47.619 0.00 0.00 0.00 1.94
96 97 0.391793 GTAGCAGGACTTCAGGGCAC 60.392 60.000 0.00 0.00 0.00 5.01
109 110 0.972883 GGGATAGGAGGCAGTAGCAG 59.027 60.000 0.00 0.00 44.61 4.24
165 166 4.906618 TCTTCACTAGTTTTGATCCCACC 58.093 43.478 0.00 0.00 0.00 4.61
189 190 7.065563 CCAGAAGATGATTTTGAGTAGACCAAG 59.934 40.741 0.00 0.00 0.00 3.61
309 310 2.711009 CTCTAGGGGTGGGCAATTATCA 59.289 50.000 0.00 0.00 0.00 2.15
324 325 9.606631 AGCATTAGAAAATACTTCAACTCTAGG 57.393 33.333 0.00 0.00 0.00 3.02
331 332 9.733556 TGAGGTTAGCATTAGAAAATACTTCAA 57.266 29.630 0.00 0.00 0.00 2.69
372 373 4.264532 ACCCCAAGATTTGAAGACCATGAT 60.265 41.667 0.00 0.00 0.00 2.45
373 374 3.075882 ACCCCAAGATTTGAAGACCATGA 59.924 43.478 0.00 0.00 0.00 3.07
405 406 0.240945 CGCCACCACATTCAACTTCC 59.759 55.000 0.00 0.00 0.00 3.46
414 415 2.035469 TGCCATTCGCCACCACAT 59.965 55.556 0.00 0.00 36.24 3.21
415 416 2.672651 CTGCCATTCGCCACCACA 60.673 61.111 0.00 0.00 36.24 4.17
454 455 0.322546 GGACCACCAGACCATCCAAC 60.323 60.000 0.00 0.00 35.97 3.77
465 466 1.132657 TCCTTTCCACTAGGACCACCA 60.133 52.381 0.00 0.00 45.73 4.17
466 467 1.652947 TCCTTTCCACTAGGACCACC 58.347 55.000 0.00 0.00 45.73 4.61
467 468 4.010349 CAATTCCTTTCCACTAGGACCAC 58.990 47.826 0.00 0.00 45.73 4.16
504 505 2.065899 TGGACAACTTTGGGAAGTGG 57.934 50.000 0.00 0.00 45.18 4.00
508 509 4.090090 TCAAGTTTGGACAACTTTGGGAA 58.910 39.130 0.00 0.00 38.32 3.97
539 540 6.692486 ACCAACTGTGTTATGTTTTCACAAA 58.308 32.000 0.00 0.00 40.70 2.83
561 562 1.826340 GCAAATCCACCCCCACAACC 61.826 60.000 0.00 0.00 0.00 3.77
563 564 0.831288 CTGCAAATCCACCCCCACAA 60.831 55.000 0.00 0.00 0.00 3.33
603 607 6.319048 ACATCTAAAGAGGTTGACCATGAT 57.681 37.500 2.56 0.00 35.29 2.45
606 610 7.234355 AGAAAACATCTAAAGAGGTTGACCAT 58.766 34.615 10.46 0.00 46.66 3.55
607 611 6.601332 AGAAAACATCTAAAGAGGTTGACCA 58.399 36.000 10.46 0.00 46.66 4.02
608 612 7.511959 AAGAAAACATCTAAAGAGGTTGACC 57.488 36.000 10.46 4.07 46.66 4.02
609 613 9.452065 GAAAAGAAAACATCTAAAGAGGTTGAC 57.548 33.333 10.46 8.01 46.66 3.18
610 614 8.342634 CGAAAAGAAAACATCTAAAGAGGTTGA 58.657 33.333 10.46 0.00 46.66 3.18
611 615 8.129211 ACGAAAAGAAAACATCTAAAGAGGTTG 58.871 33.333 10.46 0.00 46.66 3.77
613 617 7.803279 ACGAAAAGAAAACATCTAAAGAGGT 57.197 32.000 0.00 0.00 41.21 3.85
614 618 9.516314 AAAACGAAAAGAAAACATCTAAAGAGG 57.484 29.630 0.00 0.00 37.42 3.69
621 625 8.980143 TTCTCAAAAACGAAAAGAAAACATCT 57.020 26.923 0.00 0.00 41.32 2.90
622 626 9.675553 CTTTCTCAAAAACGAAAAGAAAACATC 57.324 29.630 0.00 0.00 36.01 3.06
623 627 9.203421 ACTTTCTCAAAAACGAAAAGAAAACAT 57.797 25.926 0.00 0.00 36.01 2.71
624 628 8.484008 CACTTTCTCAAAAACGAAAAGAAAACA 58.516 29.630 0.00 0.00 36.01 2.83
625 629 7.474332 GCACTTTCTCAAAAACGAAAAGAAAAC 59.526 33.333 0.00 0.00 36.01 2.43
626 630 7.169982 TGCACTTTCTCAAAAACGAAAAGAAAA 59.830 29.630 0.00 0.00 36.01 2.29
627 631 6.642950 TGCACTTTCTCAAAAACGAAAAGAAA 59.357 30.769 0.00 0.00 35.36 2.52
628 632 6.153067 TGCACTTTCTCAAAAACGAAAAGAA 58.847 32.000 0.00 0.00 0.00 2.52
629 633 5.704888 TGCACTTTCTCAAAAACGAAAAGA 58.295 33.333 0.00 0.00 0.00 2.52
630 634 6.388259 TTGCACTTTCTCAAAAACGAAAAG 57.612 33.333 0.00 0.00 0.00 2.27
631 635 6.771188 TTTGCACTTTCTCAAAAACGAAAA 57.229 29.167 0.00 0.00 30.19 2.29
632 636 6.617529 GCTTTTGCACTTTCTCAAAAACGAAA 60.618 34.615 0.00 0.00 46.58 3.46
633 637 5.164002 GCTTTTGCACTTTCTCAAAAACGAA 60.164 36.000 0.00 0.00 46.58 3.85
634 638 4.326009 GCTTTTGCACTTTCTCAAAAACGA 59.674 37.500 0.00 0.00 46.58 3.85
635 639 4.568077 GCTTTTGCACTTTCTCAAAAACG 58.432 39.130 0.00 0.00 46.58 3.60
651 655 3.758300 ACAACGAGACACAAAGCTTTTG 58.242 40.909 9.53 13.36 0.00 2.44
652 656 5.751243 ATACAACGAGACACAAAGCTTTT 57.249 34.783 9.53 0.00 0.00 2.27
653 657 5.295787 TCAATACAACGAGACACAAAGCTTT 59.704 36.000 5.69 5.69 0.00 3.51
654 658 4.814234 TCAATACAACGAGACACAAAGCTT 59.186 37.500 0.00 0.00 0.00 3.74
655 659 4.377021 TCAATACAACGAGACACAAAGCT 58.623 39.130 0.00 0.00 0.00 3.74
656 660 4.725556 TCAATACAACGAGACACAAAGC 57.274 40.909 0.00 0.00 0.00 3.51
657 661 6.136071 CCTTTCAATACAACGAGACACAAAG 58.864 40.000 0.00 0.00 0.00 2.77
658 662 5.008217 CCCTTTCAATACAACGAGACACAAA 59.992 40.000 0.00 0.00 0.00 2.83
659 663 4.513692 CCCTTTCAATACAACGAGACACAA 59.486 41.667 0.00 0.00 0.00 3.33
660 664 4.062293 CCCTTTCAATACAACGAGACACA 58.938 43.478 0.00 0.00 0.00 3.72
661 665 3.120304 GCCCTTTCAATACAACGAGACAC 60.120 47.826 0.00 0.00 0.00 3.67
662 666 3.071479 GCCCTTTCAATACAACGAGACA 58.929 45.455 0.00 0.00 0.00 3.41
663 667 3.071479 TGCCCTTTCAATACAACGAGAC 58.929 45.455 0.00 0.00 0.00 3.36
664 668 3.334691 CTGCCCTTTCAATACAACGAGA 58.665 45.455 0.00 0.00 0.00 4.04
665 669 2.420022 CCTGCCCTTTCAATACAACGAG 59.580 50.000 0.00 0.00 0.00 4.18
666 670 2.039216 TCCTGCCCTTTCAATACAACGA 59.961 45.455 0.00 0.00 0.00 3.85
667 671 2.432444 TCCTGCCCTTTCAATACAACG 58.568 47.619 0.00 0.00 0.00 4.10
668 672 3.365969 CGTTCCTGCCCTTTCAATACAAC 60.366 47.826 0.00 0.00 0.00 3.32
669 673 2.817258 CGTTCCTGCCCTTTCAATACAA 59.183 45.455 0.00 0.00 0.00 2.41
670 674 2.224670 ACGTTCCTGCCCTTTCAATACA 60.225 45.455 0.00 0.00 0.00 2.29
671 675 2.418976 GACGTTCCTGCCCTTTCAATAC 59.581 50.000 0.00 0.00 0.00 1.89
672 676 2.039216 TGACGTTCCTGCCCTTTCAATA 59.961 45.455 0.00 0.00 0.00 1.90
673 677 1.202879 TGACGTTCCTGCCCTTTCAAT 60.203 47.619 0.00 0.00 0.00 2.57
674 678 0.181587 TGACGTTCCTGCCCTTTCAA 59.818 50.000 0.00 0.00 0.00 2.69
675 679 0.181587 TTGACGTTCCTGCCCTTTCA 59.818 50.000 0.00 0.00 0.00 2.69
676 680 0.591659 GTTGACGTTCCTGCCCTTTC 59.408 55.000 0.00 0.00 0.00 2.62
677 681 0.822121 GGTTGACGTTCCTGCCCTTT 60.822 55.000 0.00 0.00 0.00 3.11
678 682 1.228154 GGTTGACGTTCCTGCCCTT 60.228 57.895 0.00 0.00 0.00 3.95
679 683 2.113243 GAGGTTGACGTTCCTGCCCT 62.113 60.000 11.55 2.01 33.83 5.19
680 684 1.671379 GAGGTTGACGTTCCTGCCC 60.671 63.158 11.55 0.00 33.83 5.36
681 685 0.250338 AAGAGGTTGACGTTCCTGCC 60.250 55.000 11.55 1.00 33.83 4.85
682 686 1.594331 AAAGAGGTTGACGTTCCTGC 58.406 50.000 11.55 5.24 33.83 4.85
683 687 4.252971 TCTAAAGAGGTTGACGTTCCTG 57.747 45.455 11.55 0.00 33.83 3.86
684 688 4.283722 ACATCTAAAGAGGTTGACGTTCCT 59.716 41.667 7.44 7.44 35.29 3.36
685 689 4.566987 ACATCTAAAGAGGTTGACGTTCC 58.433 43.478 0.00 0.00 35.29 3.62
686 690 7.088905 TCTAACATCTAAAGAGGTTGACGTTC 58.911 38.462 17.67 0.00 46.72 3.95
710 714 8.512956 CATCTTCTCCATTTGTATCATCCATTC 58.487 37.037 0.00 0.00 0.00 2.67
728 813 1.735386 TTGCTGCTGCTCATCTTCTC 58.265 50.000 17.00 0.00 40.48 2.87
744 829 1.009829 CCTCCACGTCTGCTATTTGC 58.990 55.000 0.00 0.00 43.25 3.68
830 964 2.065512 CACGATTGTCGATGTCCAACA 58.934 47.619 6.34 0.00 43.74 3.33
892 1029 3.084786 AGCATTTGTCTAACTCAAGGGC 58.915 45.455 0.00 0.00 0.00 5.19
913 1050 4.657814 AAGATGAAAAGGAGGCTAACCA 57.342 40.909 0.00 0.00 39.06 3.67
914 1051 4.399618 GGAAAGATGAAAAGGAGGCTAACC 59.600 45.833 0.00 0.00 0.00 2.85
915 1052 4.095036 CGGAAAGATGAAAAGGAGGCTAAC 59.905 45.833 0.00 0.00 0.00 2.34
916 1053 4.261801 CGGAAAGATGAAAAGGAGGCTAA 58.738 43.478 0.00 0.00 0.00 3.09
917 1054 3.873910 CGGAAAGATGAAAAGGAGGCTA 58.126 45.455 0.00 0.00 0.00 3.93
918 1055 2.716217 CGGAAAGATGAAAAGGAGGCT 58.284 47.619 0.00 0.00 0.00 4.58
919 1056 1.133216 GCGGAAAGATGAAAAGGAGGC 59.867 52.381 0.00 0.00 0.00 4.70
920 1057 1.745653 GGCGGAAAGATGAAAAGGAGG 59.254 52.381 0.00 0.00 0.00 4.30
921 1058 2.162408 GTGGCGGAAAGATGAAAAGGAG 59.838 50.000 0.00 0.00 0.00 3.69
922 1059 2.159382 GTGGCGGAAAGATGAAAAGGA 58.841 47.619 0.00 0.00 0.00 3.36
923 1060 1.202348 GGTGGCGGAAAGATGAAAAGG 59.798 52.381 0.00 0.00 0.00 3.11
924 1061 1.202348 GGGTGGCGGAAAGATGAAAAG 59.798 52.381 0.00 0.00 0.00 2.27
925 1062 1.203001 AGGGTGGCGGAAAGATGAAAA 60.203 47.619 0.00 0.00 0.00 2.29
926 1063 0.404040 AGGGTGGCGGAAAGATGAAA 59.596 50.000 0.00 0.00 0.00 2.69
927 1064 0.404040 AAGGGTGGCGGAAAGATGAA 59.596 50.000 0.00 0.00 0.00 2.57
928 1065 0.404040 AAAGGGTGGCGGAAAGATGA 59.596 50.000 0.00 0.00 0.00 2.92
929 1066 0.811281 GAAAGGGTGGCGGAAAGATG 59.189 55.000 0.00 0.00 0.00 2.90
930 1067 0.323451 GGAAAGGGTGGCGGAAAGAT 60.323 55.000 0.00 0.00 0.00 2.40
960 1097 1.435256 ACCTAAGGTGCAGGTCAAGT 58.565 50.000 0.00 0.00 43.04 3.16
1030 1177 4.438744 GCAACCATATATGCTTAATCGGGC 60.439 45.833 7.24 0.00 39.46 6.13
1233 1582 1.474077 GCAATCTCTTGGTCCGCAAAT 59.526 47.619 0.00 0.00 32.72 2.32
1234 1583 0.881118 GCAATCTCTTGGTCCGCAAA 59.119 50.000 0.00 0.00 32.72 3.68
1238 1587 2.802667 CGCGCAATCTCTTGGTCCG 61.803 63.158 8.75 0.00 32.72 4.79
1240 1589 1.639298 AAGCGCGCAATCTCTTGGTC 61.639 55.000 35.10 0.00 32.72 4.02
1251 1600 2.590291 TCCTTTGTGAAGCGCGCA 60.590 55.556 35.10 10.31 34.64 6.09
1287 1636 2.997315 TGGAGCGAGGTGAGGTGG 60.997 66.667 0.00 0.00 0.00 4.61
1289 1638 3.386237 GCTGGAGCGAGGTGAGGT 61.386 66.667 0.00 0.00 0.00 3.85
1306 1655 2.095567 CGCATCTCCAAAACCTCAGTTG 60.096 50.000 0.00 0.00 35.97 3.16
1311 1660 1.808411 TGTCGCATCTCCAAAACCTC 58.192 50.000 0.00 0.00 0.00 3.85
1312 1661 2.154462 CTTGTCGCATCTCCAAAACCT 58.846 47.619 0.00 0.00 0.00 3.50
1323 1672 1.283793 GTGTTGCAGCTTGTCGCAT 59.716 52.632 1.17 0.00 42.61 4.73
1368 1717 4.578105 CAGATCCCTAATCTTTTGAGGTGC 59.422 45.833 0.00 0.00 42.30 5.01
1377 1726 3.970640 GACACCTCCAGATCCCTAATCTT 59.029 47.826 0.00 0.00 42.30 2.40
1425 1777 0.971447 GTAGTGAACTCGGGAGGCCT 60.971 60.000 3.86 3.86 0.00 5.19
1459 1811 0.539986 TCCTTGGTACCGCAATCCTC 59.460 55.000 7.57 0.00 0.00 3.71
1491 1843 2.094026 GGTTCCCCTTAATTGCTTGCAG 60.094 50.000 0.00 0.00 0.00 4.41
1522 1874 6.407202 ACCTTGGATTTGTCTATAGTGTGAC 58.593 40.000 0.00 0.00 0.00 3.67
1536 1888 8.306761 CAAGAAAGTATTTGCTACCTTGGATTT 58.693 33.333 0.00 0.00 39.27 2.17
1576 1937 7.712204 AACATAAGGGTAACGATGGAAATTT 57.288 32.000 0.00 0.00 37.60 1.82
1577 1938 7.712204 AAACATAAGGGTAACGATGGAAATT 57.288 32.000 0.00 0.00 37.60 1.82
1621 1985 3.582780 CAAAAGGAAAATGAGCTGGAGC 58.417 45.455 0.00 0.00 42.49 4.70
1623 1987 3.575805 ACCAAAAGGAAAATGAGCTGGA 58.424 40.909 0.00 0.00 0.00 3.86
1627 1992 6.925610 AGAAAAACCAAAAGGAAAATGAGC 57.074 33.333 0.00 0.00 0.00 4.26
1636 2003 8.255206 AGTAACAAGGTAAGAAAAACCAAAAGG 58.745 33.333 0.00 0.00 39.64 3.11
1641 2008 5.652891 TGCAGTAACAAGGTAAGAAAAACCA 59.347 36.000 0.00 0.00 39.64 3.67
1647 2014 8.537016 ACAGTATATGCAGTAACAAGGTAAGAA 58.463 33.333 0.00 0.00 0.00 2.52
1648 2015 7.979537 CACAGTATATGCAGTAACAAGGTAAGA 59.020 37.037 0.00 0.00 0.00 2.10
1671 2062 1.117749 ACAGAGAGACCAGCTGCACA 61.118 55.000 8.66 0.00 33.03 4.57
1690 2081 6.978338 ACTCGTAGAATGTACAACTCAAAGA 58.022 36.000 0.00 0.56 34.09 2.52
1694 2085 6.016527 ACAAGACTCGTAGAATGTACAACTCA 60.017 38.462 0.00 0.00 34.09 3.41
1702 2093 4.866508 TTCCACAAGACTCGTAGAATGT 57.133 40.909 0.00 0.00 34.09 2.71
1709 2100 3.056465 GGAGAGAATTCCACAAGACTCGT 60.056 47.826 0.65 0.00 37.20 4.18
1711 2102 4.543590 TGGAGAGAATTCCACAAGACTC 57.456 45.455 0.65 0.00 42.24 3.36
1778 2169 7.326305 GCATATACTCACCAGATTTACGTACAG 59.674 40.741 0.00 0.00 0.00 2.74
1784 2175 8.715998 CATCTTGCATATACTCACCAGATTTAC 58.284 37.037 0.00 0.00 0.00 2.01
1787 2178 6.043590 TCCATCTTGCATATACTCACCAGATT 59.956 38.462 0.00 0.00 0.00 2.40
1795 2186 5.995055 GCAAACTCCATCTTGCATATACTC 58.005 41.667 2.07 0.00 45.81 2.59
1807 2198 9.860898 AAATAAGTCAAAATAGCAAACTCCATC 57.139 29.630 0.00 0.00 0.00 3.51
1835 2226 7.067008 GGCAACCTATAGAAAATGAAGTAGCAA 59.933 37.037 0.00 0.00 0.00 3.91
1837 2228 6.542370 TGGCAACCTATAGAAAATGAAGTAGC 59.458 38.462 0.00 0.00 0.00 3.58
1838 2229 8.682936 ATGGCAACCTATAGAAAATGAAGTAG 57.317 34.615 0.00 0.00 0.00 2.57
1839 2230 8.902806 CAATGGCAACCTATAGAAAATGAAGTA 58.097 33.333 0.00 0.00 0.00 2.24
1840 2231 7.397192 ACAATGGCAACCTATAGAAAATGAAGT 59.603 33.333 0.00 0.00 0.00 3.01
1843 2234 7.615365 AGAACAATGGCAACCTATAGAAAATGA 59.385 33.333 0.00 0.00 0.00 2.57
1844 2235 7.775120 AGAACAATGGCAACCTATAGAAAATG 58.225 34.615 0.00 0.00 0.00 2.32
1845 2236 7.961326 AGAACAATGGCAACCTATAGAAAAT 57.039 32.000 0.00 0.00 0.00 1.82
1846 2237 7.775053 AAGAACAATGGCAACCTATAGAAAA 57.225 32.000 0.00 0.00 0.00 2.29
1849 2240 7.398829 TGTAAAGAACAATGGCAACCTATAGA 58.601 34.615 0.00 0.00 34.29 1.98
1850 2241 7.624360 TGTAAAGAACAATGGCAACCTATAG 57.376 36.000 0.00 0.00 34.29 1.31
1853 2244 4.217550 GCTGTAAAGAACAATGGCAACCTA 59.782 41.667 0.00 0.00 37.74 3.08
1854 2245 3.005791 GCTGTAAAGAACAATGGCAACCT 59.994 43.478 0.00 0.00 37.74 3.50
1856 2247 4.243007 AGCTGTAAAGAACAATGGCAAC 57.757 40.909 0.00 0.00 37.74 4.17
1857 2248 4.935352 AAGCTGTAAAGAACAATGGCAA 57.065 36.364 0.00 0.00 37.74 4.52
1858 2249 4.935352 AAAGCTGTAAAGAACAATGGCA 57.065 36.364 0.00 0.00 37.74 4.92
1859 2250 4.686091 GGAAAAGCTGTAAAGAACAATGGC 59.314 41.667 0.00 0.00 37.74 4.40
1860 2251 5.691754 GTGGAAAAGCTGTAAAGAACAATGG 59.308 40.000 0.00 0.00 37.74 3.16
1861 2252 6.507023 AGTGGAAAAGCTGTAAAGAACAATG 58.493 36.000 0.00 0.00 37.74 2.82
1862 2253 6.715347 AGTGGAAAAGCTGTAAAGAACAAT 57.285 33.333 0.00 0.00 37.74 2.71
1863 2254 6.524101 AAGTGGAAAAGCTGTAAAGAACAA 57.476 33.333 0.00 0.00 37.74 2.83
1864 2255 6.151985 TGAAAGTGGAAAAGCTGTAAAGAACA 59.848 34.615 0.00 0.00 36.42 3.18
1865 2256 6.560711 TGAAAGTGGAAAAGCTGTAAAGAAC 58.439 36.000 0.00 0.00 0.00 3.01
1866 2257 6.680378 GCTGAAAGTGGAAAAGCTGTAAAGAA 60.680 38.462 0.00 0.00 35.30 2.52
1867 2258 5.221048 GCTGAAAGTGGAAAAGCTGTAAAGA 60.221 40.000 0.00 0.00 35.30 2.52
1868 2259 4.978580 GCTGAAAGTGGAAAAGCTGTAAAG 59.021 41.667 0.00 0.00 35.30 1.85
1869 2260 4.202111 GGCTGAAAGTGGAAAAGCTGTAAA 60.202 41.667 0.00 0.00 35.30 2.01
1870 2261 3.317993 GGCTGAAAGTGGAAAAGCTGTAA 59.682 43.478 0.00 0.00 35.30 2.41
1871 2262 2.884639 GGCTGAAAGTGGAAAAGCTGTA 59.115 45.455 0.00 0.00 35.30 2.74
1872 2263 1.683385 GGCTGAAAGTGGAAAAGCTGT 59.317 47.619 0.00 0.00 35.30 4.40
1873 2264 1.335324 CGGCTGAAAGTGGAAAAGCTG 60.335 52.381 0.00 0.00 35.30 4.24
1874 2265 0.954452 CGGCTGAAAGTGGAAAAGCT 59.046 50.000 0.00 0.00 35.30 3.74
1875 2266 0.664466 GCGGCTGAAAGTGGAAAAGC 60.664 55.000 0.00 0.00 35.30 3.51
1876 2267 0.667993 TGCGGCTGAAAGTGGAAAAG 59.332 50.000 0.00 0.00 35.30 2.27
1877 2268 1.327303 ATGCGGCTGAAAGTGGAAAA 58.673 45.000 0.00 0.00 35.30 2.29
1878 2269 2.192664 TATGCGGCTGAAAGTGGAAA 57.807 45.000 0.00 0.00 35.30 3.13
1879 2270 2.016318 CATATGCGGCTGAAAGTGGAA 58.984 47.619 0.00 0.00 35.30 3.53
1880 2271 1.667236 CATATGCGGCTGAAAGTGGA 58.333 50.000 0.00 0.00 35.30 4.02
1881 2272 0.664761 CCATATGCGGCTGAAAGTGG 59.335 55.000 0.00 0.00 35.30 4.00
1882 2273 0.664761 CCCATATGCGGCTGAAAGTG 59.335 55.000 0.00 0.00 35.30 3.16
1883 2274 0.255890 ACCCATATGCGGCTGAAAGT 59.744 50.000 0.00 0.00 35.30 2.66
1884 2275 2.254546 TACCCATATGCGGCTGAAAG 57.745 50.000 0.00 0.00 0.00 2.62
1885 2276 2.719531 TTACCCATATGCGGCTGAAA 57.280 45.000 0.00 0.00 0.00 2.69
1886 2277 2.949177 ATTACCCATATGCGGCTGAA 57.051 45.000 0.00 0.00 0.00 3.02
1887 2278 2.552155 GGAATTACCCATATGCGGCTGA 60.552 50.000 0.00 0.00 0.00 4.26
1888 2279 1.812571 GGAATTACCCATATGCGGCTG 59.187 52.381 0.00 0.00 0.00 4.85
1889 2280 1.423541 TGGAATTACCCATATGCGGCT 59.576 47.619 0.00 0.00 38.00 5.52
1890 2281 1.812571 CTGGAATTACCCATATGCGGC 59.187 52.381 9.43 0.00 38.00 6.53
1891 2282 1.812571 GCTGGAATTACCCATATGCGG 59.187 52.381 0.00 2.95 38.00 5.69
1892 2283 1.812571 GGCTGGAATTACCCATATGCG 59.187 52.381 0.00 0.00 38.00 4.73
1893 2284 2.171003 GGGCTGGAATTACCCATATGC 58.829 52.381 0.00 0.00 43.64 3.14
1899 2290 1.931635 TGTTTGGGCTGGAATTACCC 58.068 50.000 0.00 0.00 44.52 3.69
1900 2291 4.551702 ATTTGTTTGGGCTGGAATTACC 57.448 40.909 0.00 0.00 39.54 2.85
1901 2292 5.546526 TGAATTTGTTTGGGCTGGAATTAC 58.453 37.500 0.00 0.00 0.00 1.89
1902 2293 5.815233 TGAATTTGTTTGGGCTGGAATTA 57.185 34.783 0.00 0.00 0.00 1.40
1903 2294 4.703379 TGAATTTGTTTGGGCTGGAATT 57.297 36.364 0.00 0.00 0.00 2.17
1904 2295 4.286549 TCATGAATTTGTTTGGGCTGGAAT 59.713 37.500 0.00 0.00 0.00 3.01
1905 2296 3.645212 TCATGAATTTGTTTGGGCTGGAA 59.355 39.130 0.00 0.00 0.00 3.53
1906 2297 3.006752 GTCATGAATTTGTTTGGGCTGGA 59.993 43.478 0.00 0.00 0.00 3.86
1907 2298 3.244146 TGTCATGAATTTGTTTGGGCTGG 60.244 43.478 0.00 0.00 0.00 4.85
1908 2299 3.992643 TGTCATGAATTTGTTTGGGCTG 58.007 40.909 0.00 0.00 0.00 4.85
1909 2300 4.529377 AGATGTCATGAATTTGTTTGGGCT 59.471 37.500 0.00 0.00 0.00 5.19
1910 2301 4.824289 AGATGTCATGAATTTGTTTGGGC 58.176 39.130 0.00 0.00 0.00 5.36
1922 2313 9.480053 CACACACACATATATAAGATGTCATGA 57.520 33.333 13.63 0.00 35.31 3.07
1923 2314 9.480053 TCACACACACATATATAAGATGTCATG 57.520 33.333 0.00 5.85 35.31 3.07
1925 2316 9.883142 TTTCACACACACATATATAAGATGTCA 57.117 29.630 1.59 0.00 35.31 3.58
1933 2324 9.811995 GAGGTACTTTTCACACACACATATATA 57.188 33.333 0.00 0.00 41.55 0.86
1934 2325 8.318412 TGAGGTACTTTTCACACACACATATAT 58.682 33.333 0.00 0.00 41.55 0.86
1935 2326 7.672240 TGAGGTACTTTTCACACACACATATA 58.328 34.615 0.00 0.00 41.55 0.86
1941 2332 6.151985 ACAAAATGAGGTACTTTTCACACACA 59.848 34.615 0.00 0.00 41.55 3.72
1943 2334 6.767524 ACAAAATGAGGTACTTTTCACACA 57.232 33.333 0.00 0.00 41.55 3.72
1966 2357 9.906660 ACGCAGACAATTTTATCAGAAAAATAA 57.093 25.926 0.00 0.00 37.93 1.40
1967 2358 9.906660 AACGCAGACAATTTTATCAGAAAAATA 57.093 25.926 0.00 0.00 37.93 1.40
1968 2359 8.816640 AACGCAGACAATTTTATCAGAAAAAT 57.183 26.923 0.00 0.00 40.02 1.82
1969 2360 8.134895 AGAACGCAGACAATTTTATCAGAAAAA 58.865 29.630 0.00 0.00 33.15 1.94
1970 2361 7.648142 AGAACGCAGACAATTTTATCAGAAAA 58.352 30.769 0.00 0.00 0.00 2.29
1971 2362 7.202016 AGAACGCAGACAATTTTATCAGAAA 57.798 32.000 0.00 0.00 0.00 2.52
1972 2363 6.801539 AGAACGCAGACAATTTTATCAGAA 57.198 33.333 0.00 0.00 0.00 3.02
1983 2374 9.210329 TGATTTAAACTAATAGAACGCAGACAA 57.790 29.630 0.00 0.00 0.00 3.18
1985 2376 8.870879 AGTGATTTAAACTAATAGAACGCAGAC 58.129 33.333 0.00 0.00 0.00 3.51
1986 2377 8.997621 AGTGATTTAAACTAATAGAACGCAGA 57.002 30.769 0.00 0.00 0.00 4.26
2000 2393 4.149922 GCGCCCAAGAAAAGTGATTTAAAC 59.850 41.667 0.00 0.00 0.00 2.01
2008 2401 1.010419 GCATGCGCCCAAGAAAAGTG 61.010 55.000 4.18 0.00 0.00 3.16
2010 2403 0.037975 AAGCATGCGCCCAAGAAAAG 60.038 50.000 13.01 0.00 39.83 2.27
2012 2405 0.392336 AAAAGCATGCGCCCAAGAAA 59.608 45.000 13.01 0.00 39.83 2.52
2013 2406 0.038343 GAAAAGCATGCGCCCAAGAA 60.038 50.000 13.01 0.00 39.83 2.52
2019 2412 7.028962 TCATATATTAATGAAAAGCATGCGCC 58.971 34.615 13.01 3.44 37.28 6.53
2042 2435 7.769044 GCCCTTCAGTTATTAGTCAATTACTCA 59.231 37.037 0.00 0.00 39.80 3.41
2048 2441 5.044846 ACAGGCCCTTCAGTTATTAGTCAAT 60.045 40.000 0.00 0.00 0.00 2.57
2049 2442 4.288626 ACAGGCCCTTCAGTTATTAGTCAA 59.711 41.667 0.00 0.00 0.00 3.18
2057 2450 4.101114 TGAATAGACAGGCCCTTCAGTTA 58.899 43.478 0.00 0.00 0.00 2.24
2060 2453 3.853355 ATGAATAGACAGGCCCTTCAG 57.147 47.619 0.00 0.00 30.13 3.02
2063 2456 4.591321 TGAAATGAATAGACAGGCCCTT 57.409 40.909 0.00 0.00 0.00 3.95
2114 2507 8.620416 GCCAAAAAGGAAACAAGACAAATAAAT 58.380 29.630 0.00 0.00 41.22 1.40
2116 2509 7.106239 TGCCAAAAAGGAAACAAGACAAATAA 58.894 30.769 0.00 0.00 41.22 1.40
2117 2510 6.644347 TGCCAAAAAGGAAACAAGACAAATA 58.356 32.000 0.00 0.00 41.22 1.40
2118 2511 5.495640 TGCCAAAAAGGAAACAAGACAAAT 58.504 33.333 0.00 0.00 41.22 2.32
2119 2512 4.899502 TGCCAAAAAGGAAACAAGACAAA 58.100 34.783 0.00 0.00 41.22 2.83
2120 2513 4.543590 TGCCAAAAAGGAAACAAGACAA 57.456 36.364 0.00 0.00 41.22 3.18
2121 2514 4.751767 ATGCCAAAAAGGAAACAAGACA 57.248 36.364 0.00 0.00 41.22 3.41
2122 2515 4.686091 GCTATGCCAAAAAGGAAACAAGAC 59.314 41.667 0.00 0.00 41.22 3.01
2123 2516 4.558496 CGCTATGCCAAAAAGGAAACAAGA 60.558 41.667 0.00 0.00 41.22 3.02
2124 2517 3.674753 CGCTATGCCAAAAAGGAAACAAG 59.325 43.478 0.00 0.00 41.22 3.16
2125 2518 3.319405 TCGCTATGCCAAAAAGGAAACAA 59.681 39.130 0.00 0.00 41.22 2.83
2126 2519 2.887783 TCGCTATGCCAAAAAGGAAACA 59.112 40.909 0.00 0.00 41.22 2.83
2128 2521 4.279671 TCTTTCGCTATGCCAAAAAGGAAA 59.720 37.500 0.00 0.00 41.22 3.13
2129 2522 3.823873 TCTTTCGCTATGCCAAAAAGGAA 59.176 39.130 0.00 0.00 41.22 3.36
2130 2523 3.190535 GTCTTTCGCTATGCCAAAAAGGA 59.809 43.478 0.00 0.00 41.22 3.36
2131 2524 3.191371 AGTCTTTCGCTATGCCAAAAAGG 59.809 43.478 0.00 0.00 41.84 3.11
2132 2525 4.425577 AGTCTTTCGCTATGCCAAAAAG 57.574 40.909 0.00 0.00 0.00 2.27
2133 2526 5.001232 ACTAGTCTTTCGCTATGCCAAAAA 58.999 37.500 0.00 0.00 0.00 1.94
2135 2528 4.202245 ACTAGTCTTTCGCTATGCCAAA 57.798 40.909 0.00 0.00 0.00 3.28
2137 2530 3.887621 AACTAGTCTTTCGCTATGCCA 57.112 42.857 0.00 0.00 0.00 4.92
2138 2531 6.846325 AAATAACTAGTCTTTCGCTATGCC 57.154 37.500 0.00 0.00 0.00 4.40
2175 2568 7.487829 TCGATAAATTTTTCATTGGCAAGTAGC 59.512 33.333 5.96 0.00 44.65 3.58
2176 2569 8.909708 TCGATAAATTTTTCATTGGCAAGTAG 57.090 30.769 5.96 0.00 0.00 2.57
2180 2690 7.971168 ACGTATCGATAAATTTTTCATTGGCAA 59.029 29.630 6.72 0.68 0.00 4.52
2187 2697 9.153721 ACCTTACACGTATCGATAAATTTTTCA 57.846 29.630 6.72 0.00 0.00 2.69
2193 2703 9.403110 GTGAATACCTTACACGTATCGATAAAT 57.597 33.333 6.72 0.00 0.00 1.40
2199 2709 7.009815 ACAAATGTGAATACCTTACACGTATCG 59.990 37.037 0.00 0.00 37.35 2.92
2204 2714 8.073768 AGAAAACAAATGTGAATACCTTACACG 58.926 33.333 0.00 0.00 37.35 4.49
2205 2715 9.394477 GAGAAAACAAATGTGAATACCTTACAC 57.606 33.333 0.00 0.00 35.45 2.90
2211 2764 8.816640 AACATGAGAAAACAAATGTGAATACC 57.183 30.769 0.00 0.00 33.65 2.73
2220 2773 7.823745 ACCTACAGAACATGAGAAAACAAAT 57.176 32.000 0.00 0.00 0.00 2.32
2221 2774 7.639113 AACCTACAGAACATGAGAAAACAAA 57.361 32.000 0.00 0.00 0.00 2.83
2224 2777 7.931275 AGAAAACCTACAGAACATGAGAAAAC 58.069 34.615 0.00 0.00 0.00 2.43
2225 2778 8.405531 CAAGAAAACCTACAGAACATGAGAAAA 58.594 33.333 0.00 0.00 0.00 2.29
2229 2782 6.260936 ACACAAGAAAACCTACAGAACATGAG 59.739 38.462 0.00 0.00 0.00 2.90
2230 2783 6.119536 ACACAAGAAAACCTACAGAACATGA 58.880 36.000 0.00 0.00 0.00 3.07
2231 2784 6.377327 ACACAAGAAAACCTACAGAACATG 57.623 37.500 0.00 0.00 0.00 3.21
2235 2788 7.996644 AGGATTAACACAAGAAAACCTACAGAA 59.003 33.333 0.00 0.00 0.00 3.02
2237 2790 7.308589 CCAGGATTAACACAAGAAAACCTACAG 60.309 40.741 0.00 0.00 0.00 2.74
2240 2793 6.607019 ACCAGGATTAACACAAGAAAACCTA 58.393 36.000 0.00 0.00 0.00 3.08
2247 2800 3.844211 AGCCTACCAGGATTAACACAAGA 59.156 43.478 0.00 0.00 37.67 3.02
2248 2801 4.222124 AGCCTACCAGGATTAACACAAG 57.778 45.455 0.00 0.00 37.67 3.16
2250 2803 3.844211 AGAAGCCTACCAGGATTAACACA 59.156 43.478 0.00 0.00 45.30 3.72
2251 2804 4.489306 AGAAGCCTACCAGGATTAACAC 57.511 45.455 0.00 0.00 45.30 3.32
2252 2805 4.288626 ACAAGAAGCCTACCAGGATTAACA 59.711 41.667 0.00 0.00 45.30 2.41
2253 2806 4.844884 ACAAGAAGCCTACCAGGATTAAC 58.155 43.478 0.00 0.00 45.30 2.01
2254 2807 6.824958 ATACAAGAAGCCTACCAGGATTAA 57.175 37.500 0.00 0.00 45.30 1.40
2255 2808 6.824958 AATACAAGAAGCCTACCAGGATTA 57.175 37.500 0.00 0.00 45.30 1.75
2257 2810 5.717119 AAATACAAGAAGCCTACCAGGAT 57.283 39.130 0.00 0.00 37.67 3.24
2258 2811 5.253330 CAAAATACAAGAAGCCTACCAGGA 58.747 41.667 0.00 0.00 37.67 3.86
2259 2812 4.142381 GCAAAATACAAGAAGCCTACCAGG 60.142 45.833 0.00 0.00 38.80 4.45
2260 2813 4.458989 TGCAAAATACAAGAAGCCTACCAG 59.541 41.667 0.00 0.00 0.00 4.00
2261 2814 4.402829 TGCAAAATACAAGAAGCCTACCA 58.597 39.130 0.00 0.00 0.00 3.25
2262 2815 5.582689 ATGCAAAATACAAGAAGCCTACC 57.417 39.130 0.00 0.00 0.00 3.18
2263 2816 6.972901 GGTTATGCAAAATACAAGAAGCCTAC 59.027 38.462 0.00 0.00 0.00 3.18
2264 2817 6.661377 TGGTTATGCAAAATACAAGAAGCCTA 59.339 34.615 0.00 0.00 0.00 3.93
2265 2818 5.480073 TGGTTATGCAAAATACAAGAAGCCT 59.520 36.000 0.00 0.00 0.00 4.58
2266 2819 5.719173 TGGTTATGCAAAATACAAGAAGCC 58.281 37.500 0.00 0.00 0.00 4.35
2267 2820 6.389906 ACTGGTTATGCAAAATACAAGAAGC 58.610 36.000 0.00 0.00 0.00 3.86
2268 2821 7.698130 GCTACTGGTTATGCAAAATACAAGAAG 59.302 37.037 0.00 0.00 0.00 2.85
2269 2822 7.393234 AGCTACTGGTTATGCAAAATACAAGAA 59.607 33.333 0.00 0.00 0.00 2.52
2270 2823 6.884295 AGCTACTGGTTATGCAAAATACAAGA 59.116 34.615 0.00 0.00 0.00 3.02
2271 2824 6.968904 CAGCTACTGGTTATGCAAAATACAAG 59.031 38.462 0.00 0.00 0.00 3.16
2272 2825 6.624861 GCAGCTACTGGTTATGCAAAATACAA 60.625 38.462 0.00 0.00 36.88 2.41
2273 2826 5.163663 GCAGCTACTGGTTATGCAAAATACA 60.164 40.000 0.00 0.00 36.88 2.29
2274 2827 5.273944 GCAGCTACTGGTTATGCAAAATAC 58.726 41.667 0.00 0.00 36.88 1.89
2275 2828 4.338118 GGCAGCTACTGGTTATGCAAAATA 59.662 41.667 0.00 0.00 38.63 1.40
2276 2829 3.131046 GGCAGCTACTGGTTATGCAAAAT 59.869 43.478 0.00 0.00 38.63 1.82
2277 2830 2.491693 GGCAGCTACTGGTTATGCAAAA 59.508 45.455 0.00 0.00 38.63 2.44
2278 2831 2.091541 GGCAGCTACTGGTTATGCAAA 58.908 47.619 0.00 0.00 38.63 3.68
2279 2832 1.004161 TGGCAGCTACTGGTTATGCAA 59.996 47.619 0.00 0.00 38.63 4.08
2280 2833 0.617935 TGGCAGCTACTGGTTATGCA 59.382 50.000 0.00 0.00 38.63 3.96
2281 2834 1.750193 TTGGCAGCTACTGGTTATGC 58.250 50.000 0.00 0.00 36.16 3.14
2282 2835 4.009675 TCTTTTGGCAGCTACTGGTTATG 58.990 43.478 0.00 0.00 31.21 1.90
2283 2836 4.019321 TCTCTTTTGGCAGCTACTGGTTAT 60.019 41.667 0.00 0.00 31.21 1.89
2284 2837 3.326588 TCTCTTTTGGCAGCTACTGGTTA 59.673 43.478 0.00 0.00 31.21 2.85
2285 2838 2.106511 TCTCTTTTGGCAGCTACTGGTT 59.893 45.455 0.00 0.00 31.21 3.67
2286 2839 1.699634 TCTCTTTTGGCAGCTACTGGT 59.300 47.619 0.00 0.00 31.21 4.00
2287 2840 2.027745 TCTCTCTTTTGGCAGCTACTGG 60.028 50.000 0.00 0.00 31.21 4.00
2288 2841 3.325293 TCTCTCTTTTGGCAGCTACTG 57.675 47.619 0.00 0.00 34.12 2.74
2289 2842 4.714308 ACTATCTCTCTTTTGGCAGCTACT 59.286 41.667 0.00 0.00 0.00 2.57
2290 2843 5.017294 ACTATCTCTCTTTTGGCAGCTAC 57.983 43.478 0.00 0.00 0.00 3.58
2291 2844 4.711846 TGACTATCTCTCTTTTGGCAGCTA 59.288 41.667 0.00 0.00 0.00 3.32
2292 2845 3.517100 TGACTATCTCTCTTTTGGCAGCT 59.483 43.478 0.00 0.00 0.00 4.24
2293 2846 3.866651 TGACTATCTCTCTTTTGGCAGC 58.133 45.455 0.00 0.00 0.00 5.25
2294 2847 6.169094 TCTTTGACTATCTCTCTTTTGGCAG 58.831 40.000 0.00 0.00 0.00 4.85
2295 2848 6.114187 TCTTTGACTATCTCTCTTTTGGCA 57.886 37.500 0.00 0.00 0.00 4.92
2296 2849 7.041098 TGTTTCTTTGACTATCTCTCTTTTGGC 60.041 37.037 0.00 0.00 0.00 4.52
2297 2850 8.383318 TGTTTCTTTGACTATCTCTCTTTTGG 57.617 34.615 0.00 0.00 0.00 3.28
2298 2851 9.875675 CTTGTTTCTTTGACTATCTCTCTTTTG 57.124 33.333 0.00 0.00 0.00 2.44
2299 2852 9.838339 TCTTGTTTCTTTGACTATCTCTCTTTT 57.162 29.630 0.00 0.00 0.00 2.27
2300 2853 9.487790 CTCTTGTTTCTTTGACTATCTCTCTTT 57.512 33.333 0.00 0.00 0.00 2.52
2301 2854 8.865090 TCTCTTGTTTCTTTGACTATCTCTCTT 58.135 33.333 0.00 0.00 0.00 2.85
2302 2855 8.415950 TCTCTTGTTTCTTTGACTATCTCTCT 57.584 34.615 0.00 0.00 0.00 3.10
2303 2856 9.139174 CTTCTCTTGTTTCTTTGACTATCTCTC 57.861 37.037 0.00 0.00 0.00 3.20
2304 2857 8.093927 CCTTCTCTTGTTTCTTTGACTATCTCT 58.906 37.037 0.00 0.00 0.00 3.10
2305 2858 8.091449 TCCTTCTCTTGTTTCTTTGACTATCTC 58.909 37.037 0.00 0.00 0.00 2.75
2306 2859 7.967908 TCCTTCTCTTGTTTCTTTGACTATCT 58.032 34.615 0.00 0.00 0.00 1.98
2307 2860 8.608844 TTCCTTCTCTTGTTTCTTTGACTATC 57.391 34.615 0.00 0.00 0.00 2.08
2308 2861 8.432805 TCTTCCTTCTCTTGTTTCTTTGACTAT 58.567 33.333 0.00 0.00 0.00 2.12
2312 2865 7.338710 TCTTCTTCCTTCTCTTGTTTCTTTGA 58.661 34.615 0.00 0.00 0.00 2.69
2331 2884 6.605119 TGAAGAAATGGGACTTTCTCTTCTT 58.395 36.000 10.11 0.00 43.05 2.52
2362 2915 0.030235 TTGTGTGACTCTGTCCGTCG 59.970 55.000 0.00 0.00 34.17 5.12
2368 2921 1.065491 TGCAACCTTGTGTGACTCTGT 60.065 47.619 0.00 0.00 0.00 3.41
2388 2941 7.047460 ACTGAAGAGACTGCAATTTTCATTT 57.953 32.000 0.00 0.00 0.00 2.32
2389 2942 6.645790 ACTGAAGAGACTGCAATTTTCATT 57.354 33.333 0.00 0.00 0.00 2.57
2442 2995 4.899352 ACTACCACTCTCTGCAAAATCT 57.101 40.909 0.00 0.00 0.00 2.40
2446 2999 4.100963 TCTGAAACTACCACTCTCTGCAAA 59.899 41.667 0.00 0.00 0.00 3.68
2452 3005 4.985409 CACTGTTCTGAAACTACCACTCTC 59.015 45.833 0.00 0.00 36.30 3.20
2459 3012 5.485662 AAACTGCACTGTTCTGAAACTAC 57.514 39.130 0.00 0.00 36.30 2.73
2460 3013 5.645929 TCAAAACTGCACTGTTCTGAAACTA 59.354 36.000 0.00 0.00 36.30 2.24
2485 3040 4.898829 TCACCACTCAAATGACACTTTG 57.101 40.909 4.79 4.79 37.44 2.77
2492 3047 4.704540 ACACTGTTTTCACCACTCAAATGA 59.295 37.500 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.