Multiple sequence alignment - TraesCS2B01G495200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G495200 chr2B 100.000 3112 0 0 1 3112 692110398 692113509 0.000000e+00 5747.0
1 TraesCS2B01G495200 chr2B 90.385 208 12 4 2020 2219 692126602 692126809 1.840000e-67 267.0
2 TraesCS2B01G495200 chr2B 79.880 333 56 7 183 506 421080255 421080585 1.870000e-57 233.0
3 TraesCS2B01G495200 chr2A 90.199 1561 91 25 764 2290 714029823 714031355 0.000000e+00 1978.0
4 TraesCS2B01G495200 chr2A 91.946 596 39 6 2519 3112 714031364 714031952 0.000000e+00 826.0
5 TraesCS2B01G495200 chr2A 95.614 228 9 1 2292 2519 258346965 258346739 6.340000e-97 364.0
6 TraesCS2B01G495200 chr2A 93.697 238 14 1 2292 2528 177665588 177665825 3.820000e-94 355.0
7 TraesCS2B01G495200 chr2A 87.727 220 12 5 541 748 714029617 714029833 3.100000e-60 243.0
8 TraesCS2B01G495200 chr2A 81.277 235 36 6 184 416 378396007 378395779 1.910000e-42 183.0
9 TraesCS2B01G495200 chr2A 76.984 252 52 4 183 429 772877576 772877826 4.180000e-29 139.0
10 TraesCS2B01G495200 chr2A 78.302 106 21 2 1 105 90040067 90040171 2.000000e-07 67.6
11 TraesCS2B01G495200 chr2D 91.196 1488 78 19 844 2293 575828136 575829608 0.000000e+00 1973.0
12 TraesCS2B01G495200 chr6D 95.516 223 10 0 2292 2514 217731943 217732165 1.060000e-94 357.0
13 TraesCS2B01G495200 chr3B 95.516 223 10 0 2292 2514 49950064 49949842 1.060000e-94 357.0
14 TraesCS2B01G495200 chr3B 95.111 225 11 0 2292 2516 235884226 235884002 3.820000e-94 355.0
15 TraesCS2B01G495200 chr3B 92.000 50 4 0 48 97 676637527 676637576 1.550000e-08 71.3
16 TraesCS2B01G495200 chr4B 94.760 229 10 1 2286 2512 68116553 68116781 3.820000e-94 355.0
17 TraesCS2B01G495200 chr4B 84.783 184 24 3 1 182 375372764 375372945 6.860000e-42 182.0
18 TraesCS2B01G495200 chr5D 93.966 232 13 1 2280 2510 115404091 115404322 1.780000e-92 350.0
19 TraesCS2B01G495200 chr5B 93.939 231 14 0 2286 2516 184284190 184283960 1.780000e-92 350.0
20 TraesCS2B01G495200 chr5B 86.885 183 22 2 1 182 652770857 652771038 1.460000e-48 204.0
21 TraesCS2B01G495200 chr3D 93.249 237 14 2 2294 2530 561707938 561708172 6.390000e-92 348.0
22 TraesCS2B01G495200 chr3D 86.747 83 6 3 2882 2964 147457415 147457492 1.540000e-13 87.9
23 TraesCS2B01G495200 chrUn 80.180 333 57 5 183 507 49271893 49272224 1.120000e-59 241.0
24 TraesCS2B01G495200 chrUn 79.883 343 58 7 183 517 341695668 341695329 1.120000e-59 241.0
25 TraesCS2B01G495200 chr6B 84.699 183 26 2 1 182 631842229 631842410 6.860000e-42 182.0
26 TraesCS2B01G495200 chr7D 82.514 183 31 1 1 182 48602638 48602456 3.210000e-35 159.0
27 TraesCS2B01G495200 chr7D 85.714 105 15 0 1 105 363036394 363036498 9.120000e-21 111.0
28 TraesCS2B01G495200 chr5A 85.938 128 16 2 1 128 531549630 531549505 5.410000e-28 135.0
29 TraesCS2B01G495200 chr7B 89.888 89 8 1 2882 2969 745289439 745289527 2.540000e-21 113.0
30 TraesCS2B01G495200 chr7B 97.059 34 1 0 58 91 165319865 165319832 1.210000e-04 58.4
31 TraesCS2B01G495200 chr6A 89.011 91 10 0 2882 2972 254440574 254440484 2.540000e-21 113.0
32 TraesCS2B01G495200 chr4D 89.773 88 8 1 2882 2969 96123377 96123463 9.120000e-21 111.0
33 TraesCS2B01G495200 chr3A 88.235 85 8 2 2886 2969 451688557 451688640 1.970000e-17 100.0
34 TraesCS2B01G495200 chr1D 88.889 63 7 0 2901 2963 269519066 269519128 9.250000e-11 78.7
35 TraesCS2B01G495200 chr1B 88.333 60 7 0 2910 2969 369504800 369504741 4.300000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G495200 chr2B 692110398 692113509 3111 False 5747.000000 5747 100.000000 1 3112 1 chr2B.!!$F2 3111
1 TraesCS2B01G495200 chr2A 714029617 714031952 2335 False 1015.666667 1978 89.957333 541 3112 3 chr2A.!!$F4 2571
2 TraesCS2B01G495200 chr2D 575828136 575829608 1472 False 1973.000000 1973 91.196000 844 2293 1 chr2D.!!$F1 1449


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 273 0.036952 CACAATCTGCGTCCACTCCT 60.037 55.0 0.0 0.0 0.00 3.69 F
277 278 0.037734 TCTGCGTCCACTCCTAGACA 59.962 55.0 0.0 0.0 33.08 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1893 1942 0.861837 CACGAGGAGACAAACAGCAC 59.138 55.0 0.0 0.0 0.0 4.4 R
2157 2212 0.895530 TGTGCTAGGAACGAAGGGAG 59.104 55.0 0.0 0.0 0.0 4.3 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.642707 TGGACTTCGTTTGGTATGAATTTT 57.357 33.333 0.00 0.00 31.52 1.82
24 25 6.674066 TGGACTTCGTTTGGTATGAATTTTC 58.326 36.000 0.00 0.00 31.52 2.29
25 26 6.488683 TGGACTTCGTTTGGTATGAATTTTCT 59.511 34.615 0.00 0.00 31.52 2.52
26 27 6.801862 GGACTTCGTTTGGTATGAATTTTCTG 59.198 38.462 0.00 0.00 31.52 3.02
27 28 6.149633 ACTTCGTTTGGTATGAATTTTCTGC 58.850 36.000 0.00 0.00 31.52 4.26
28 29 4.717991 TCGTTTGGTATGAATTTTCTGCG 58.282 39.130 0.00 0.00 0.00 5.18
29 30 4.452795 TCGTTTGGTATGAATTTTCTGCGA 59.547 37.500 0.00 0.00 0.00 5.10
30 31 5.049336 TCGTTTGGTATGAATTTTCTGCGAA 60.049 36.000 0.00 0.00 0.00 4.70
31 32 5.627367 CGTTTGGTATGAATTTTCTGCGAAA 59.373 36.000 0.00 0.55 0.00 3.46
32 33 6.398517 CGTTTGGTATGAATTTTCTGCGAAAC 60.399 38.462 3.71 0.00 0.00 2.78
33 34 5.697473 TGGTATGAATTTTCTGCGAAACA 57.303 34.783 3.71 0.97 0.00 2.83
34 35 6.078202 TGGTATGAATTTTCTGCGAAACAA 57.922 33.333 3.71 0.00 0.00 2.83
35 36 6.148948 TGGTATGAATTTTCTGCGAAACAAG 58.851 36.000 3.71 0.00 0.00 3.16
36 37 6.016693 TGGTATGAATTTTCTGCGAAACAAGA 60.017 34.615 3.71 0.00 0.00 3.02
37 38 7.029563 GGTATGAATTTTCTGCGAAACAAGAT 58.970 34.615 3.71 0.00 0.00 2.40
38 39 8.181573 GGTATGAATTTTCTGCGAAACAAGATA 58.818 33.333 3.71 0.00 0.00 1.98
39 40 9.000018 GTATGAATTTTCTGCGAAACAAGATAC 58.000 33.333 3.71 5.55 0.00 2.24
40 41 6.964908 TGAATTTTCTGCGAAACAAGATACA 58.035 32.000 3.71 0.00 0.00 2.29
41 42 7.592938 TGAATTTTCTGCGAAACAAGATACAT 58.407 30.769 3.71 0.00 0.00 2.29
42 43 7.538334 TGAATTTTCTGCGAAACAAGATACATG 59.462 33.333 3.71 0.00 0.00 3.21
43 44 4.340894 TTCTGCGAAACAAGATACATGC 57.659 40.909 0.00 0.00 0.00 4.06
44 45 2.677836 TCTGCGAAACAAGATACATGCC 59.322 45.455 0.00 0.00 0.00 4.40
45 46 1.396648 TGCGAAACAAGATACATGCCG 59.603 47.619 0.00 0.00 0.00 5.69
46 47 1.856014 GCGAAACAAGATACATGCCGC 60.856 52.381 0.00 0.00 0.00 6.53
47 48 1.396648 CGAAACAAGATACATGCCGCA 59.603 47.619 0.00 0.00 0.00 5.69
48 49 2.159585 CGAAACAAGATACATGCCGCAA 60.160 45.455 0.00 0.00 0.00 4.85
49 50 3.669290 CGAAACAAGATACATGCCGCAAA 60.669 43.478 0.00 0.00 0.00 3.68
50 51 2.919666 ACAAGATACATGCCGCAAAC 57.080 45.000 0.00 0.00 0.00 2.93
51 52 2.158559 ACAAGATACATGCCGCAAACA 58.841 42.857 0.00 0.00 0.00 2.83
52 53 2.162208 ACAAGATACATGCCGCAAACAG 59.838 45.455 0.00 0.00 0.00 3.16
53 54 1.382522 AGATACATGCCGCAAACAGG 58.617 50.000 0.00 0.00 0.00 4.00
54 55 1.065491 AGATACATGCCGCAAACAGGA 60.065 47.619 0.00 0.00 0.00 3.86
55 56 1.742831 GATACATGCCGCAAACAGGAA 59.257 47.619 0.00 0.00 0.00 3.36
56 57 1.610363 TACATGCCGCAAACAGGAAA 58.390 45.000 0.00 0.00 0.00 3.13
57 58 0.968405 ACATGCCGCAAACAGGAAAT 59.032 45.000 0.00 0.00 0.00 2.17
58 59 1.337074 ACATGCCGCAAACAGGAAATG 60.337 47.619 0.00 0.00 33.35 2.32
59 60 1.067706 CATGCCGCAAACAGGAAATGA 60.068 47.619 0.00 0.00 30.53 2.57
60 61 0.313672 TGCCGCAAACAGGAAATGAC 59.686 50.000 0.00 0.00 0.00 3.06
61 62 0.313672 GCCGCAAACAGGAAATGACA 59.686 50.000 0.00 0.00 0.00 3.58
62 63 1.067635 GCCGCAAACAGGAAATGACAT 60.068 47.619 0.00 0.00 0.00 3.06
63 64 2.610232 GCCGCAAACAGGAAATGACATT 60.610 45.455 0.00 0.00 0.00 2.71
64 65 2.988493 CCGCAAACAGGAAATGACATTG 59.012 45.455 0.34 0.00 0.00 2.82
65 66 2.988493 CGCAAACAGGAAATGACATTGG 59.012 45.455 0.34 0.00 0.00 3.16
66 67 3.328505 GCAAACAGGAAATGACATTGGG 58.671 45.455 0.34 0.00 0.00 4.12
67 68 3.328505 CAAACAGGAAATGACATTGGGC 58.671 45.455 0.34 0.00 0.00 5.36
68 69 2.307496 ACAGGAAATGACATTGGGCA 57.693 45.000 0.34 0.00 0.00 5.36
69 70 1.895131 ACAGGAAATGACATTGGGCAC 59.105 47.619 0.34 0.00 0.00 5.01
70 71 2.173519 CAGGAAATGACATTGGGCACT 58.826 47.619 0.34 0.00 0.00 4.40
71 72 2.094390 CAGGAAATGACATTGGGCACTG 60.094 50.000 0.34 3.05 0.00 3.66
72 73 1.205417 GGAAATGACATTGGGCACTGG 59.795 52.381 0.34 0.00 0.00 4.00
73 74 2.170166 GAAATGACATTGGGCACTGGA 58.830 47.619 0.34 0.00 0.00 3.86
74 75 2.537633 AATGACATTGGGCACTGGAT 57.462 45.000 0.00 0.00 0.00 3.41
75 76 2.537633 ATGACATTGGGCACTGGATT 57.462 45.000 0.00 0.00 0.00 3.01
76 77 3.668141 ATGACATTGGGCACTGGATTA 57.332 42.857 0.00 0.00 0.00 1.75
77 78 3.448093 TGACATTGGGCACTGGATTAA 57.552 42.857 0.00 0.00 0.00 1.40
78 79 3.979911 TGACATTGGGCACTGGATTAAT 58.020 40.909 0.00 0.00 0.00 1.40
79 80 5.122707 TGACATTGGGCACTGGATTAATA 57.877 39.130 0.00 0.00 0.00 0.98
80 81 5.704354 TGACATTGGGCACTGGATTAATAT 58.296 37.500 0.00 0.00 0.00 1.28
81 82 5.535783 TGACATTGGGCACTGGATTAATATG 59.464 40.000 0.00 0.00 0.00 1.78
82 83 5.457686 ACATTGGGCACTGGATTAATATGT 58.542 37.500 0.00 0.00 0.00 2.29
83 84 5.898972 ACATTGGGCACTGGATTAATATGTT 59.101 36.000 0.00 0.00 0.00 2.71
84 85 7.066142 ACATTGGGCACTGGATTAATATGTTA 58.934 34.615 0.00 0.00 0.00 2.41
85 86 7.231317 ACATTGGGCACTGGATTAATATGTTAG 59.769 37.037 0.00 0.00 0.00 2.34
86 87 6.260700 TGGGCACTGGATTAATATGTTAGT 57.739 37.500 0.00 0.00 0.00 2.24
87 88 6.668645 TGGGCACTGGATTAATATGTTAGTT 58.331 36.000 0.00 0.00 0.00 2.24
88 89 6.770785 TGGGCACTGGATTAATATGTTAGTTC 59.229 38.462 0.00 0.00 0.00 3.01
89 90 6.770785 GGGCACTGGATTAATATGTTAGTTCA 59.229 38.462 0.00 0.00 0.00 3.18
90 91 7.284489 GGGCACTGGATTAATATGTTAGTTCAA 59.716 37.037 0.00 0.00 0.00 2.69
91 92 8.345565 GGCACTGGATTAATATGTTAGTTCAAG 58.654 37.037 0.00 0.00 0.00 3.02
92 93 9.109393 GCACTGGATTAATATGTTAGTTCAAGA 57.891 33.333 5.96 0.00 0.00 3.02
190 191 3.284323 CGAAGACGTATCCCATACCTG 57.716 52.381 0.00 0.00 32.08 4.00
191 192 2.607282 CGAAGACGTATCCCATACCTGC 60.607 54.545 0.00 0.00 32.08 4.85
192 193 2.383442 AGACGTATCCCATACCTGCT 57.617 50.000 0.00 0.00 32.08 4.24
193 194 2.679082 AGACGTATCCCATACCTGCTT 58.321 47.619 0.00 0.00 32.08 3.91
194 195 2.365617 AGACGTATCCCATACCTGCTTG 59.634 50.000 0.00 0.00 32.08 4.01
195 196 1.202651 ACGTATCCCATACCTGCTTGC 60.203 52.381 0.00 0.00 32.08 4.01
196 197 1.878102 CGTATCCCATACCTGCTTGCC 60.878 57.143 0.00 0.00 32.08 4.52
197 198 1.142870 GTATCCCATACCTGCTTGCCA 59.857 52.381 0.00 0.00 0.00 4.92
198 199 0.106519 ATCCCATACCTGCTTGCCAC 60.107 55.000 0.00 0.00 0.00 5.01
199 200 1.001020 CCCATACCTGCTTGCCACA 60.001 57.895 0.00 0.00 0.00 4.17
200 201 0.611618 CCCATACCTGCTTGCCACAA 60.612 55.000 0.00 0.00 0.00 3.33
201 202 1.255882 CCATACCTGCTTGCCACAAA 58.744 50.000 0.00 0.00 0.00 2.83
202 203 1.067635 CCATACCTGCTTGCCACAAAC 60.068 52.381 0.00 0.00 0.00 2.93
203 204 1.067635 CATACCTGCTTGCCACAAACC 60.068 52.381 0.00 0.00 0.00 3.27
204 205 0.106469 TACCTGCTTGCCACAAACCA 60.106 50.000 0.00 0.00 0.00 3.67
205 206 1.067916 CCTGCTTGCCACAAACCAC 59.932 57.895 0.00 0.00 0.00 4.16
206 207 1.299316 CTGCTTGCCACAAACCACG 60.299 57.895 0.00 0.00 0.00 4.94
207 208 2.658268 GCTTGCCACAAACCACGC 60.658 61.111 0.00 0.00 0.00 5.34
208 209 2.804167 CTTGCCACAAACCACGCA 59.196 55.556 0.00 0.00 0.00 5.24
209 210 1.588667 CTTGCCACAAACCACGCAC 60.589 57.895 0.00 0.00 0.00 5.34
210 211 2.003658 CTTGCCACAAACCACGCACT 62.004 55.000 0.00 0.00 0.00 4.40
211 212 1.999071 TTGCCACAAACCACGCACTC 61.999 55.000 0.00 0.00 0.00 3.51
212 213 2.477176 GCCACAAACCACGCACTCA 61.477 57.895 0.00 0.00 0.00 3.41
213 214 1.648720 CCACAAACCACGCACTCAG 59.351 57.895 0.00 0.00 0.00 3.35
214 215 1.009675 CACAAACCACGCACTCAGC 60.010 57.895 0.00 0.00 40.87 4.26
215 216 1.451207 ACAAACCACGCACTCAGCA 60.451 52.632 0.00 0.00 46.13 4.41
216 217 1.009675 CAAACCACGCACTCAGCAC 60.010 57.895 0.00 0.00 46.13 4.40
217 218 1.451207 AAACCACGCACTCAGCACA 60.451 52.632 0.00 0.00 46.13 4.57
218 219 1.714899 AAACCACGCACTCAGCACAC 61.715 55.000 0.00 0.00 46.13 3.82
219 220 3.705638 CCACGCACTCAGCACACG 61.706 66.667 0.00 0.00 46.13 4.49
220 221 2.658268 CACGCACTCAGCACACGA 60.658 61.111 0.00 0.00 46.13 4.35
221 222 2.658593 ACGCACTCAGCACACGAC 60.659 61.111 0.00 0.00 46.13 4.34
222 223 2.355126 CGCACTCAGCACACGACT 60.355 61.111 0.00 0.00 46.13 4.18
223 224 2.652079 CGCACTCAGCACACGACTG 61.652 63.158 0.00 0.00 46.13 3.51
224 225 2.313172 GCACTCAGCACACGACTGG 61.313 63.158 0.00 0.00 44.79 4.00
225 226 2.029666 ACTCAGCACACGACTGGC 59.970 61.111 0.00 0.00 35.78 4.85
226 227 2.740055 CTCAGCACACGACTGGCC 60.740 66.667 0.00 0.00 35.78 5.36
227 228 3.519973 CTCAGCACACGACTGGCCA 62.520 63.158 4.71 4.71 35.78 5.36
228 229 2.359107 CAGCACACGACTGGCCAT 60.359 61.111 5.51 0.00 0.00 4.40
229 230 2.046892 AGCACACGACTGGCCATC 60.047 61.111 5.51 5.44 0.00 3.51
230 231 2.046892 GCACACGACTGGCCATCT 60.047 61.111 5.51 0.00 0.00 2.90
231 232 1.672356 GCACACGACTGGCCATCTT 60.672 57.895 5.51 0.00 0.00 2.40
232 233 1.639298 GCACACGACTGGCCATCTTC 61.639 60.000 5.51 2.00 0.00 2.87
233 234 1.021390 CACACGACTGGCCATCTTCC 61.021 60.000 5.51 0.00 0.00 3.46
234 235 1.296392 CACGACTGGCCATCTTCCA 59.704 57.895 5.51 0.00 0.00 3.53
244 245 2.318224 CATCTTCCAGATGCTGCCG 58.682 57.895 0.00 0.00 44.69 5.69
245 246 0.179065 CATCTTCCAGATGCTGCCGA 60.179 55.000 0.00 0.00 44.69 5.54
246 247 0.763652 ATCTTCCAGATGCTGCCGAT 59.236 50.000 0.00 0.00 32.80 4.18
247 248 0.179065 TCTTCCAGATGCTGCCGATG 60.179 55.000 0.00 0.00 0.00 3.84
248 249 1.783031 CTTCCAGATGCTGCCGATGC 61.783 60.000 0.00 0.00 38.26 3.91
257 258 3.847621 TGCCGATGCAAACCACAA 58.152 50.000 0.00 0.00 46.66 3.33
258 259 2.349701 TGCCGATGCAAACCACAAT 58.650 47.368 0.00 0.00 46.66 2.71
259 260 0.243365 TGCCGATGCAAACCACAATC 59.757 50.000 0.00 0.00 46.66 2.67
260 261 0.527565 GCCGATGCAAACCACAATCT 59.472 50.000 0.00 0.00 37.47 2.40
261 262 1.733389 GCCGATGCAAACCACAATCTG 60.733 52.381 0.00 0.00 37.47 2.90
262 263 1.621107 CGATGCAAACCACAATCTGC 58.379 50.000 0.00 0.00 35.32 4.26
263 264 1.621107 GATGCAAACCACAATCTGCG 58.379 50.000 0.00 0.00 37.62 5.18
264 265 0.961019 ATGCAAACCACAATCTGCGT 59.039 45.000 0.00 0.00 37.62 5.24
265 266 0.310543 TGCAAACCACAATCTGCGTC 59.689 50.000 0.00 0.00 37.62 5.19
266 267 0.387239 GCAAACCACAATCTGCGTCC 60.387 55.000 0.00 0.00 0.00 4.79
267 268 0.950836 CAAACCACAATCTGCGTCCA 59.049 50.000 0.00 0.00 0.00 4.02
268 269 0.951558 AAACCACAATCTGCGTCCAC 59.048 50.000 0.00 0.00 0.00 4.02
269 270 0.108585 AACCACAATCTGCGTCCACT 59.891 50.000 0.00 0.00 0.00 4.00
270 271 0.320771 ACCACAATCTGCGTCCACTC 60.321 55.000 0.00 0.00 0.00 3.51
271 272 1.021390 CCACAATCTGCGTCCACTCC 61.021 60.000 0.00 0.00 0.00 3.85
272 273 0.036952 CACAATCTGCGTCCACTCCT 60.037 55.000 0.00 0.00 0.00 3.69
273 274 1.204704 CACAATCTGCGTCCACTCCTA 59.795 52.381 0.00 0.00 0.00 2.94
274 275 1.478510 ACAATCTGCGTCCACTCCTAG 59.521 52.381 0.00 0.00 0.00 3.02
275 276 1.751351 CAATCTGCGTCCACTCCTAGA 59.249 52.381 0.00 0.00 0.00 2.43
276 277 1.394618 ATCTGCGTCCACTCCTAGAC 58.605 55.000 0.00 0.00 0.00 2.59
277 278 0.037734 TCTGCGTCCACTCCTAGACA 59.962 55.000 0.00 0.00 33.08 3.41
278 279 0.888619 CTGCGTCCACTCCTAGACAA 59.111 55.000 0.00 0.00 33.08 3.18
279 280 0.601558 TGCGTCCACTCCTAGACAAC 59.398 55.000 0.00 0.00 33.08 3.32
280 281 0.108756 GCGTCCACTCCTAGACAACC 60.109 60.000 0.00 0.00 33.08 3.77
281 282 1.546961 CGTCCACTCCTAGACAACCT 58.453 55.000 0.00 0.00 33.08 3.50
282 283 1.473278 CGTCCACTCCTAGACAACCTC 59.527 57.143 0.00 0.00 33.08 3.85
283 284 1.826096 GTCCACTCCTAGACAACCTCC 59.174 57.143 0.00 0.00 33.08 4.30
284 285 1.196012 CCACTCCTAGACAACCTCCC 58.804 60.000 0.00 0.00 0.00 4.30
285 286 1.552486 CCACTCCTAGACAACCTCCCA 60.552 57.143 0.00 0.00 0.00 4.37
286 287 2.257207 CACTCCTAGACAACCTCCCAA 58.743 52.381 0.00 0.00 0.00 4.12
287 288 2.234908 CACTCCTAGACAACCTCCCAAG 59.765 54.545 0.00 0.00 0.00 3.61
288 289 1.208293 CTCCTAGACAACCTCCCAAGC 59.792 57.143 0.00 0.00 0.00 4.01
289 290 1.203313 TCCTAGACAACCTCCCAAGCT 60.203 52.381 0.00 0.00 0.00 3.74
290 291 1.208293 CCTAGACAACCTCCCAAGCTC 59.792 57.143 0.00 0.00 0.00 4.09
291 292 1.208293 CTAGACAACCTCCCAAGCTCC 59.792 57.143 0.00 0.00 0.00 4.70
292 293 1.376037 GACAACCTCCCAAGCTCCG 60.376 63.158 0.00 0.00 0.00 4.63
293 294 2.747855 CAACCTCCCAAGCTCCGC 60.748 66.667 0.00 0.00 0.00 5.54
294 295 4.394712 AACCTCCCAAGCTCCGCG 62.395 66.667 0.00 0.00 0.00 6.46
310 311 4.389576 CGTGGCGCTGGAGCAAAC 62.390 66.667 7.64 0.00 42.21 2.93
311 312 4.389576 GTGGCGCTGGAGCAAACG 62.390 66.667 7.64 0.00 42.21 3.60
316 317 4.090057 GCTGGAGCAAACGCCGTC 62.090 66.667 0.00 0.00 38.90 4.79
317 318 3.777925 CTGGAGCAAACGCCGTCG 61.778 66.667 0.00 0.00 38.90 5.12
320 321 4.007940 GAGCAAACGCCGTCGCAA 62.008 61.111 13.17 0.00 39.84 4.85
321 322 4.307908 AGCAAACGCCGTCGCAAC 62.308 61.111 13.17 0.00 39.84 4.17
343 344 2.517609 GGAGCCCGAGGATACAAGT 58.482 57.895 0.00 0.00 41.41 3.16
344 345 0.389757 GGAGCCCGAGGATACAAGTC 59.610 60.000 0.00 0.00 41.41 3.01
345 346 0.389757 GAGCCCGAGGATACAAGTCC 59.610 60.000 0.00 0.00 41.41 3.85
346 347 0.325296 AGCCCGAGGATACAAGTCCA 60.325 55.000 0.00 0.00 40.90 4.02
347 348 0.179081 GCCCGAGGATACAAGTCCAC 60.179 60.000 0.00 0.00 40.90 4.02
348 349 0.464452 CCCGAGGATACAAGTCCACC 59.536 60.000 0.00 0.00 40.90 4.61
349 350 1.191535 CCGAGGATACAAGTCCACCA 58.808 55.000 0.00 0.00 40.90 4.17
350 351 1.134788 CCGAGGATACAAGTCCACCAC 60.135 57.143 0.00 0.00 40.90 4.16
351 352 1.469251 CGAGGATACAAGTCCACCACG 60.469 57.143 0.00 0.00 40.90 4.94
352 353 1.822990 GAGGATACAAGTCCACCACGA 59.177 52.381 0.00 0.00 40.90 4.35
353 354 1.825474 AGGATACAAGTCCACCACGAG 59.175 52.381 0.00 0.00 40.90 4.18
354 355 1.134788 GGATACAAGTCCACCACGAGG 60.135 57.143 0.00 0.00 38.20 4.63
355 356 1.822990 GATACAAGTCCACCACGAGGA 59.177 52.381 5.68 0.00 38.69 3.71
356 357 1.933021 TACAAGTCCACCACGAGGAT 58.067 50.000 5.68 0.00 37.52 3.24
357 358 0.321671 ACAAGTCCACCACGAGGATG 59.678 55.000 5.68 0.11 37.52 3.51
358 359 1.021390 CAAGTCCACCACGAGGATGC 61.021 60.000 5.68 0.00 37.52 3.91
359 360 2.125106 GTCCACCACGAGGATGCC 60.125 66.667 5.68 0.00 37.52 4.40
360 361 2.606213 TCCACCACGAGGATGCCA 60.606 61.111 5.68 0.00 38.69 4.92
361 362 2.436646 CCACCACGAGGATGCCAC 60.437 66.667 5.68 0.00 38.69 5.01
362 363 2.436646 CACCACGAGGATGCCACC 60.437 66.667 5.68 0.00 38.69 4.61
363 364 4.082523 ACCACGAGGATGCCACCG 62.083 66.667 5.68 0.00 38.69 4.94
364 365 4.082523 CCACGAGGATGCCACCGT 62.083 66.667 0.00 0.00 36.02 4.83
365 366 2.509336 CACGAGGATGCCACCGTC 60.509 66.667 0.00 0.00 34.13 4.79
366 367 4.129737 ACGAGGATGCCACCGTCG 62.130 66.667 0.00 0.00 36.98 5.12
367 368 3.822192 CGAGGATGCCACCGTCGA 61.822 66.667 0.00 0.00 34.82 4.20
368 369 2.202756 GAGGATGCCACCGTCGAC 60.203 66.667 5.18 5.18 34.73 4.20
369 370 2.994995 AGGATGCCACCGTCGACA 60.995 61.111 17.16 0.00 34.73 4.35
370 371 2.186903 GGATGCCACCGTCGACAT 59.813 61.111 17.16 0.00 0.00 3.06
371 372 2.173669 GGATGCCACCGTCGACATG 61.174 63.158 17.16 12.80 0.00 3.21
372 373 2.813179 GATGCCACCGTCGACATGC 61.813 63.158 17.16 11.97 0.00 4.06
375 376 2.125147 CCACCGTCGACATGCCAT 60.125 61.111 17.16 0.00 0.00 4.40
376 377 2.173669 CCACCGTCGACATGCCATC 61.174 63.158 17.16 0.00 0.00 3.51
377 378 2.173669 CACCGTCGACATGCCATCC 61.174 63.158 17.16 0.00 0.00 3.51
378 379 2.359169 ACCGTCGACATGCCATCCT 61.359 57.895 17.16 0.00 0.00 3.24
379 380 1.153369 CCGTCGACATGCCATCCTT 60.153 57.895 17.16 0.00 0.00 3.36
380 381 0.104120 CCGTCGACATGCCATCCTTA 59.896 55.000 17.16 0.00 0.00 2.69
381 382 1.209128 CGTCGACATGCCATCCTTAC 58.791 55.000 17.16 0.00 0.00 2.34
382 383 1.202417 CGTCGACATGCCATCCTTACT 60.202 52.381 17.16 0.00 0.00 2.24
383 384 2.738643 CGTCGACATGCCATCCTTACTT 60.739 50.000 17.16 0.00 0.00 2.24
384 385 2.609459 GTCGACATGCCATCCTTACTTG 59.391 50.000 11.55 0.00 0.00 3.16
385 386 2.499693 TCGACATGCCATCCTTACTTGA 59.500 45.455 0.00 0.00 0.00 3.02
386 387 3.055458 TCGACATGCCATCCTTACTTGAA 60.055 43.478 0.00 0.00 0.00 2.69
387 388 3.063997 CGACATGCCATCCTTACTTGAAC 59.936 47.826 0.00 0.00 0.00 3.18
388 389 4.009675 GACATGCCATCCTTACTTGAACA 58.990 43.478 0.00 0.00 0.00 3.18
389 390 3.758554 ACATGCCATCCTTACTTGAACAC 59.241 43.478 0.00 0.00 0.00 3.32
390 391 3.500448 TGCCATCCTTACTTGAACACA 57.500 42.857 0.00 0.00 0.00 3.72
391 392 3.146066 TGCCATCCTTACTTGAACACAC 58.854 45.455 0.00 0.00 0.00 3.82
392 393 3.181445 TGCCATCCTTACTTGAACACACT 60.181 43.478 0.00 0.00 0.00 3.55
393 394 3.189287 GCCATCCTTACTTGAACACACTG 59.811 47.826 0.00 0.00 0.00 3.66
394 395 3.753272 CCATCCTTACTTGAACACACTGG 59.247 47.826 0.00 0.00 0.00 4.00
395 396 4.389374 CATCCTTACTTGAACACACTGGT 58.611 43.478 0.00 0.00 0.00 4.00
396 397 4.497291 TCCTTACTTGAACACACTGGTT 57.503 40.909 0.00 0.00 0.00 3.67
397 398 4.850680 TCCTTACTTGAACACACTGGTTT 58.149 39.130 0.00 0.00 0.00 3.27
398 399 4.879545 TCCTTACTTGAACACACTGGTTTC 59.120 41.667 0.00 0.00 0.00 2.78
399 400 4.036380 CCTTACTTGAACACACTGGTTTCC 59.964 45.833 0.00 0.00 0.00 3.13
400 401 3.080300 ACTTGAACACACTGGTTTCCA 57.920 42.857 0.00 0.00 0.00 3.53
401 402 3.426615 ACTTGAACACACTGGTTTCCAA 58.573 40.909 0.00 0.00 30.80 3.53
402 403 3.829601 ACTTGAACACACTGGTTTCCAAA 59.170 39.130 0.00 0.00 30.80 3.28
403 404 4.466015 ACTTGAACACACTGGTTTCCAAAT 59.534 37.500 0.00 0.00 30.80 2.32
404 405 4.647424 TGAACACACTGGTTTCCAAATC 57.353 40.909 0.00 0.00 30.80 2.17
405 406 4.019858 TGAACACACTGGTTTCCAAATCA 58.980 39.130 0.00 0.00 30.80 2.57
406 407 4.464244 TGAACACACTGGTTTCCAAATCAA 59.536 37.500 0.00 0.00 30.80 2.57
407 408 5.047021 TGAACACACTGGTTTCCAAATCAAA 60.047 36.000 0.00 0.00 30.80 2.69
408 409 4.754322 ACACACTGGTTTCCAAATCAAAC 58.246 39.130 0.00 0.00 30.80 2.93
409 410 4.466015 ACACACTGGTTTCCAAATCAAACT 59.534 37.500 0.00 0.00 34.66 2.66
410 411 5.043248 CACACTGGTTTCCAAATCAAACTC 58.957 41.667 0.00 0.00 34.66 3.01
411 412 4.099419 ACACTGGTTTCCAAATCAAACTCC 59.901 41.667 0.00 0.00 34.66 3.85
412 413 4.099266 CACTGGTTTCCAAATCAAACTCCA 59.901 41.667 0.00 0.00 34.66 3.86
413 414 4.714308 ACTGGTTTCCAAATCAAACTCCAA 59.286 37.500 0.00 0.00 34.66 3.53
414 415 5.017294 TGGTTTCCAAATCAAACTCCAAC 57.983 39.130 0.00 0.00 34.66 3.77
415 416 4.467795 TGGTTTCCAAATCAAACTCCAACA 59.532 37.500 0.00 0.00 34.66 3.33
416 417 4.808895 GGTTTCCAAATCAAACTCCAACAC 59.191 41.667 0.00 0.00 34.66 3.32
417 418 3.980646 TCCAAATCAAACTCCAACACG 57.019 42.857 0.00 0.00 0.00 4.49
418 419 2.621055 TCCAAATCAAACTCCAACACGG 59.379 45.455 0.00 0.00 0.00 4.94
419 420 2.621055 CCAAATCAAACTCCAACACGGA 59.379 45.455 0.00 0.00 43.61 4.69
420 421 3.255642 CCAAATCAAACTCCAACACGGAT 59.744 43.478 0.00 0.00 45.19 4.18
421 422 4.475944 CAAATCAAACTCCAACACGGATC 58.524 43.478 0.00 0.00 45.19 3.36
422 423 1.790755 TCAAACTCCAACACGGATCG 58.209 50.000 0.00 0.00 45.19 3.69
423 424 0.165944 CAAACTCCAACACGGATCGC 59.834 55.000 0.00 0.00 45.19 4.58
424 425 0.953960 AAACTCCAACACGGATCGCC 60.954 55.000 0.00 0.00 45.19 5.54
425 426 1.827399 AACTCCAACACGGATCGCCT 61.827 55.000 0.00 0.00 45.19 5.52
426 427 1.519455 CTCCAACACGGATCGCCTC 60.519 63.158 0.00 0.00 45.19 4.70
427 428 2.225791 CTCCAACACGGATCGCCTCA 62.226 60.000 0.00 0.00 45.19 3.86
428 429 1.153369 CCAACACGGATCGCCTCAT 60.153 57.895 0.00 0.00 36.56 2.90
429 430 1.154205 CCAACACGGATCGCCTCATC 61.154 60.000 0.00 0.00 36.56 2.92
430 431 1.226974 AACACGGATCGCCTCATCG 60.227 57.895 0.00 0.00 0.00 3.84
431 432 2.355126 CACGGATCGCCTCATCGG 60.355 66.667 0.00 0.00 0.00 4.18
432 433 3.606662 ACGGATCGCCTCATCGGG 61.607 66.667 0.00 0.00 0.00 5.14
433 434 4.363990 CGGATCGCCTCATCGGGG 62.364 72.222 0.00 0.00 46.64 5.73
439 440 3.090532 GCCTCATCGGGGAAGGGT 61.091 66.667 0.00 0.00 0.00 4.34
440 441 3.108288 GCCTCATCGGGGAAGGGTC 62.108 68.421 0.00 0.00 0.00 4.46
441 442 1.383248 CCTCATCGGGGAAGGGTCT 60.383 63.158 0.00 0.00 0.00 3.85
442 443 1.690219 CCTCATCGGGGAAGGGTCTG 61.690 65.000 0.00 0.00 0.00 3.51
443 444 1.689233 TCATCGGGGAAGGGTCTGG 60.689 63.158 0.00 0.00 0.00 3.86
444 445 1.689233 CATCGGGGAAGGGTCTGGA 60.689 63.158 0.00 0.00 0.00 3.86
445 446 1.056700 CATCGGGGAAGGGTCTGGAT 61.057 60.000 0.00 0.00 0.00 3.41
446 447 0.566176 ATCGGGGAAGGGTCTGGATA 59.434 55.000 0.00 0.00 0.00 2.59
447 448 0.566176 TCGGGGAAGGGTCTGGATAT 59.434 55.000 0.00 0.00 0.00 1.63
448 449 1.061657 TCGGGGAAGGGTCTGGATATT 60.062 52.381 0.00 0.00 0.00 1.28
449 450 1.348036 CGGGGAAGGGTCTGGATATTC 59.652 57.143 0.00 0.00 0.00 1.75
450 451 2.707554 GGGGAAGGGTCTGGATATTCT 58.292 52.381 0.00 0.00 0.00 2.40
451 452 3.056832 GGGGAAGGGTCTGGATATTCTT 58.943 50.000 0.00 0.00 0.00 2.52
452 453 3.463704 GGGGAAGGGTCTGGATATTCTTT 59.536 47.826 0.00 0.00 0.00 2.52
453 454 4.663592 GGGGAAGGGTCTGGATATTCTTTA 59.336 45.833 0.00 0.00 0.00 1.85
454 455 5.313506 GGGGAAGGGTCTGGATATTCTTTAT 59.686 44.000 0.00 0.00 0.00 1.40
455 456 6.183361 GGGGAAGGGTCTGGATATTCTTTATT 60.183 42.308 0.00 0.00 0.00 1.40
456 457 6.943146 GGGAAGGGTCTGGATATTCTTTATTC 59.057 42.308 0.00 0.00 0.00 1.75
457 458 6.651225 GGAAGGGTCTGGATATTCTTTATTCG 59.349 42.308 0.00 0.00 0.00 3.34
458 459 6.115448 AGGGTCTGGATATTCTTTATTCGG 57.885 41.667 0.00 0.00 0.00 4.30
459 460 4.695928 GGGTCTGGATATTCTTTATTCGGC 59.304 45.833 0.00 0.00 0.00 5.54
460 461 4.389077 GGTCTGGATATTCTTTATTCGGCG 59.611 45.833 0.00 0.00 0.00 6.46
461 462 4.989168 GTCTGGATATTCTTTATTCGGCGT 59.011 41.667 6.85 0.00 0.00 5.68
462 463 5.118817 GTCTGGATATTCTTTATTCGGCGTC 59.881 44.000 6.85 0.00 0.00 5.19
463 464 3.985279 TGGATATTCTTTATTCGGCGTCG 59.015 43.478 1.15 1.15 37.82 5.12
464 465 3.367025 GGATATTCTTTATTCGGCGTCGG 59.633 47.826 10.62 0.00 36.95 4.79
465 466 0.935196 ATTCTTTATTCGGCGTCGGC 59.065 50.000 10.62 9.07 36.95 5.54
466 467 0.390078 TTCTTTATTCGGCGTCGGCA 60.390 50.000 19.59 0.00 42.47 5.69
467 468 0.179094 TCTTTATTCGGCGTCGGCAT 60.179 50.000 19.59 4.76 42.47 4.40
468 469 0.232303 CTTTATTCGGCGTCGGCATC 59.768 55.000 19.59 0.00 42.47 3.91
469 470 1.484227 TTTATTCGGCGTCGGCATCG 61.484 55.000 19.59 2.61 42.47 3.84
470 471 2.616786 TTATTCGGCGTCGGCATCGT 62.617 55.000 19.59 4.09 42.47 3.73
471 472 2.616786 TATTCGGCGTCGGCATCGTT 62.617 55.000 19.59 1.14 42.47 3.85
472 473 2.616786 ATTCGGCGTCGGCATCGTTA 62.617 55.000 19.59 0.00 42.47 3.18
473 474 2.616786 TTCGGCGTCGGCATCGTTAT 62.617 55.000 19.59 0.00 42.47 1.89
474 475 2.645510 CGGCGTCGGCATCGTTATC 61.646 63.158 19.59 0.00 42.47 1.75
475 476 2.645510 GGCGTCGGCATCGTTATCG 61.646 63.158 14.73 0.00 42.47 2.92
476 477 2.837280 CGTCGGCATCGTTATCGC 59.163 61.111 0.00 0.00 37.69 4.58
477 478 2.645510 CGTCGGCATCGTTATCGCC 61.646 63.158 0.00 0.00 42.64 5.54
480 481 4.021650 GGCATCGTTATCGCCGAA 57.978 55.556 0.00 0.00 37.93 4.30
481 482 1.853319 GGCATCGTTATCGCCGAAG 59.147 57.895 0.00 0.00 37.93 3.79
482 483 1.201825 GCATCGTTATCGCCGAAGC 59.798 57.895 0.00 0.00 40.99 3.86
483 484 1.215655 GCATCGTTATCGCCGAAGCT 61.216 55.000 0.00 0.00 43.41 3.74
484 485 1.929038 GCATCGTTATCGCCGAAGCTA 60.929 52.381 0.00 0.00 43.41 3.32
485 486 2.390938 CATCGTTATCGCCGAAGCTAA 58.609 47.619 0.00 0.00 37.93 3.09
486 487 2.565210 TCGTTATCGCCGAAGCTAAA 57.435 45.000 0.00 0.00 36.60 1.85
487 488 2.878580 TCGTTATCGCCGAAGCTAAAA 58.121 42.857 0.00 0.00 36.60 1.52
488 489 2.599973 TCGTTATCGCCGAAGCTAAAAC 59.400 45.455 0.00 0.00 36.60 2.43
489 490 2.593582 CGTTATCGCCGAAGCTAAAACG 60.594 50.000 0.00 0.00 37.94 3.60
490 491 2.565210 TATCGCCGAAGCTAAAACGA 57.435 45.000 0.00 4.59 36.60 3.85
491 492 1.935933 ATCGCCGAAGCTAAAACGAT 58.064 45.000 8.34 8.34 36.60 3.73
492 493 0.996462 TCGCCGAAGCTAAAACGATG 59.004 50.000 0.00 0.00 36.60 3.84
493 494 0.996462 CGCCGAAGCTAAAACGATGA 59.004 50.000 0.00 0.00 36.60 2.92
494 495 1.392168 CGCCGAAGCTAAAACGATGAA 59.608 47.619 0.00 0.00 36.60 2.57
495 496 2.770532 GCCGAAGCTAAAACGATGAAC 58.229 47.619 0.00 0.00 35.50 3.18
496 497 2.158841 GCCGAAGCTAAAACGATGAACA 59.841 45.455 0.00 0.00 35.50 3.18
497 498 3.364565 GCCGAAGCTAAAACGATGAACAA 60.365 43.478 0.00 0.00 35.50 2.83
498 499 4.148891 CCGAAGCTAAAACGATGAACAAC 58.851 43.478 0.00 0.00 0.00 3.32
499 500 4.148891 CGAAGCTAAAACGATGAACAACC 58.851 43.478 0.00 0.00 0.00 3.77
500 501 4.084013 CGAAGCTAAAACGATGAACAACCT 60.084 41.667 0.00 0.00 0.00 3.50
501 502 5.119588 CGAAGCTAAAACGATGAACAACCTA 59.880 40.000 0.00 0.00 0.00 3.08
502 503 6.347079 CGAAGCTAAAACGATGAACAACCTAA 60.347 38.462 0.00 0.00 0.00 2.69
503 504 6.870971 AGCTAAAACGATGAACAACCTAAA 57.129 33.333 0.00 0.00 0.00 1.85
504 505 7.266922 AGCTAAAACGATGAACAACCTAAAA 57.733 32.000 0.00 0.00 0.00 1.52
505 506 7.708998 AGCTAAAACGATGAACAACCTAAAAA 58.291 30.769 0.00 0.00 0.00 1.94
506 507 7.646526 AGCTAAAACGATGAACAACCTAAAAAC 59.353 33.333 0.00 0.00 0.00 2.43
507 508 7.432838 GCTAAAACGATGAACAACCTAAAAACA 59.567 33.333 0.00 0.00 0.00 2.83
508 509 9.458374 CTAAAACGATGAACAACCTAAAAACAT 57.542 29.630 0.00 0.00 0.00 2.71
510 511 9.974980 AAAACGATGAACAACCTAAAAACATAT 57.025 25.926 0.00 0.00 0.00 1.78
514 515 9.221775 CGATGAACAACCTAAAAACATATAAGC 57.778 33.333 0.00 0.00 0.00 3.09
518 519 9.999009 GAACAACCTAAAAACATATAAGCTACC 57.001 33.333 0.00 0.00 0.00 3.18
519 520 9.523168 AACAACCTAAAAACATATAAGCTACCA 57.477 29.630 0.00 0.00 0.00 3.25
520 521 9.523168 ACAACCTAAAAACATATAAGCTACCAA 57.477 29.630 0.00 0.00 0.00 3.67
535 536 7.640597 AAGCTACCAATACCTAAAACAATCC 57.359 36.000 0.00 0.00 0.00 3.01
536 537 6.727394 AGCTACCAATACCTAAAACAATCCA 58.273 36.000 0.00 0.00 0.00 3.41
537 538 6.602009 AGCTACCAATACCTAAAACAATCCAC 59.398 38.462 0.00 0.00 0.00 4.02
538 539 6.602009 GCTACCAATACCTAAAACAATCCACT 59.398 38.462 0.00 0.00 0.00 4.00
539 540 7.122204 GCTACCAATACCTAAAACAATCCACTT 59.878 37.037 0.00 0.00 0.00 3.16
544 545 8.576442 CAATACCTAAAACAATCCACTTCAACT 58.424 33.333 0.00 0.00 0.00 3.16
598 609 1.983224 CGGAAGGAAGGAAGCTCCA 59.017 57.895 5.21 0.00 39.61 3.86
650 661 3.682858 CCGCTGGAAGAAAGAAAACGATA 59.317 43.478 0.00 0.00 34.07 2.92
651 662 4.153475 CCGCTGGAAGAAAGAAAACGATAA 59.847 41.667 0.00 0.00 34.07 1.75
656 667 5.529430 TGGAAGAAAGAAAACGATAAGCACA 59.471 36.000 0.00 0.00 0.00 4.57
657 668 5.851703 GGAAGAAAGAAAACGATAAGCACAC 59.148 40.000 0.00 0.00 0.00 3.82
681 692 2.609183 ATCCGTACGTTGCTCGCTCC 62.609 60.000 15.21 0.00 44.19 4.70
726 739 6.216569 TGAGCTACAAGTCTACTCAAACAAG 58.783 40.000 0.00 0.00 34.59 3.16
734 747 6.919775 AGTCTACTCAAACAAGTCAGGTAT 57.080 37.500 0.00 0.00 0.00 2.73
735 748 8.304596 CAAGTCTACTCAAACAAGTCAGGTATA 58.695 37.037 0.00 0.00 0.00 1.47
736 749 7.828712 AGTCTACTCAAACAAGTCAGGTATAC 58.171 38.462 0.00 0.00 0.00 1.47
737 750 7.670559 AGTCTACTCAAACAAGTCAGGTATACT 59.329 37.037 2.25 0.00 0.00 2.12
738 751 8.954350 GTCTACTCAAACAAGTCAGGTATACTA 58.046 37.037 2.25 0.00 0.00 1.82
739 752 9.696572 TCTACTCAAACAAGTCAGGTATACTAT 57.303 33.333 2.25 0.00 0.00 2.12
745 758 9.886132 CAAACAAGTCAGGTATACTATTAAGGT 57.114 33.333 2.25 0.00 0.00 3.50
803 816 5.582550 GGTACGAACTATAACTGGTGTACC 58.417 45.833 2.83 2.83 42.44 3.34
804 817 4.361451 ACGAACTATAACTGGTGTACCG 57.639 45.455 0.00 0.00 39.43 4.02
805 818 3.758554 ACGAACTATAACTGGTGTACCGT 59.241 43.478 0.00 0.00 39.43 4.83
806 819 4.100529 CGAACTATAACTGGTGTACCGTG 58.899 47.826 0.00 0.00 39.43 4.94
807 820 4.379813 CGAACTATAACTGGTGTACCGTGT 60.380 45.833 0.00 0.00 39.43 4.49
808 821 5.163764 CGAACTATAACTGGTGTACCGTGTA 60.164 44.000 0.00 0.00 39.43 2.90
809 822 5.567138 ACTATAACTGGTGTACCGTGTAC 57.433 43.478 7.11 7.11 39.43 2.90
810 823 5.256474 ACTATAACTGGTGTACCGTGTACT 58.744 41.667 13.14 0.00 39.43 2.73
833 846 8.029642 ACTCATGTAGGAGTATTTTCAAAACG 57.970 34.615 0.00 0.00 45.95 3.60
834 847 7.119262 ACTCATGTAGGAGTATTTTCAAAACGG 59.881 37.037 0.00 0.00 45.95 4.44
835 848 7.162761 TCATGTAGGAGTATTTTCAAAACGGA 58.837 34.615 0.00 0.00 0.00 4.69
876 895 9.538508 TCTACTTGTACAAGAAGAAAGTAAACC 57.461 33.333 36.14 0.00 40.79 3.27
877 896 9.321562 CTACTTGTACAAGAAGAAAGTAAACCA 57.678 33.333 36.14 2.33 40.79 3.67
878 897 8.747538 ACTTGTACAAGAAGAAAGTAAACCAT 57.252 30.769 36.14 10.03 40.79 3.55
879 898 8.621286 ACTTGTACAAGAAGAAAGTAAACCATG 58.379 33.333 36.14 9.49 40.79 3.66
914 933 5.962433 ACTCCCGTGAATGGATATATAACG 58.038 41.667 0.00 0.00 0.00 3.18
917 936 4.500127 CCGTGAATGGATATATAACGGCA 58.500 43.478 6.91 0.00 42.09 5.69
976 996 2.943653 GAAACACCAACGCCCTCG 59.056 61.111 0.00 0.00 42.43 4.63
1030 1050 1.821332 CCATTGCTCTCCCGCCTTC 60.821 63.158 0.00 0.00 0.00 3.46
1050 1070 1.202580 CCCTCCATGGAGAACATCGAC 60.203 57.143 38.37 0.00 44.53 4.20
1321 1341 4.521062 AGCTCGTCGGCCAGATGC 62.521 66.667 2.24 7.64 35.85 3.91
1324 1344 4.147449 TCGTCGGCCAGATGCAGG 62.147 66.667 2.24 0.00 43.89 4.85
1326 1346 2.202987 GTCGGCCAGATGCAGGAG 60.203 66.667 2.24 0.00 43.89 3.69
1327 1347 4.166888 TCGGCCAGATGCAGGAGC 62.167 66.667 2.24 0.00 43.89 4.70
1328 1348 4.172512 CGGCCAGATGCAGGAGCT 62.173 66.667 2.24 0.00 43.89 4.09
1403 1423 2.427245 CCCTCCTCCACTACGCCTG 61.427 68.421 0.00 0.00 0.00 4.85
1578 1598 3.723348 GCCGAGAAACACCACCGC 61.723 66.667 0.00 0.00 0.00 5.68
1647 1673 3.134127 GCCGCCATCAGGGAACAC 61.134 66.667 0.00 0.00 40.01 3.32
1648 1674 2.438434 CCGCCATCAGGGAACACC 60.438 66.667 0.00 0.00 40.01 4.16
1659 1685 2.280797 GAACACCAGCTGCCGTCA 60.281 61.111 8.66 0.00 0.00 4.35
1684 1714 3.864003 GGTACCAGCAATTTCTCTCGTAC 59.136 47.826 7.15 0.00 0.00 3.67
1685 1715 2.973945 ACCAGCAATTTCTCTCGTACC 58.026 47.619 0.00 0.00 0.00 3.34
1686 1716 1.927174 CCAGCAATTTCTCTCGTACCG 59.073 52.381 0.00 0.00 0.00 4.02
1704 1750 1.323534 CCGTCGTGTTTGATTCCGATC 59.676 52.381 0.00 0.00 0.00 3.69
1705 1751 2.259618 CGTCGTGTTTGATTCCGATCT 58.740 47.619 0.00 0.00 33.28 2.75
1707 1753 4.042398 CGTCGTGTTTGATTCCGATCTAT 58.958 43.478 0.00 0.00 33.28 1.98
1709 1755 5.282510 GTCGTGTTTGATTCCGATCTATCT 58.717 41.667 0.00 0.00 33.28 1.98
1712 1758 7.595502 GTCGTGTTTGATTCCGATCTATCTATT 59.404 37.037 0.00 0.00 33.28 1.73
1717 1763 9.424319 GTTTGATTCCGATCTATCTATTGCTAA 57.576 33.333 0.00 0.00 33.28 3.09
1729 1775 9.265901 TCTATCTATTGCTAATTTTCTGCAGTC 57.734 33.333 14.67 0.00 38.01 3.51
1732 1778 5.573337 ATTGCTAATTTTCTGCAGTCTCC 57.427 39.130 14.67 0.00 38.01 3.71
1780 1829 2.775890 GATTCGATGGATGCAGGTGAT 58.224 47.619 0.00 0.00 0.00 3.06
1856 1905 1.219522 CGAAGGCGACCTCGTTGTTT 61.220 55.000 0.00 0.00 42.22 2.83
1982 2031 2.559440 GCTATCCAACCTGAGCAAGAG 58.441 52.381 0.00 0.00 34.96 2.85
2066 2115 4.541020 GCTTTCCTTGAGCGCAAC 57.459 55.556 11.47 3.52 0.00 4.17
2138 2193 1.118838 GACCCAGCTCATCTGCTAGT 58.881 55.000 0.00 0.00 41.98 2.57
2157 2212 6.072893 TGCTAGTTCCTGTAAATTTTCGTTCC 60.073 38.462 0.00 0.00 0.00 3.62
2170 2225 0.541296 TCGTTCCTCCCTTCGTTCCT 60.541 55.000 0.00 0.00 0.00 3.36
2221 2281 6.548622 AGGAGGTTGAGTAATATACTACGCAA 59.451 38.462 6.44 6.44 39.59 4.85
2245 2305 8.450180 CAATTACCAATTTTGATTTAGGGCAAC 58.550 33.333 0.00 0.00 0.00 4.17
2246 2306 5.823861 ACCAATTTTGATTTAGGGCAACT 57.176 34.783 0.00 0.00 0.00 3.16
2247 2307 6.186420 ACCAATTTTGATTTAGGGCAACTT 57.814 33.333 0.00 0.00 0.00 2.66
2248 2308 6.600388 ACCAATTTTGATTTAGGGCAACTTT 58.400 32.000 0.00 0.00 0.00 2.66
2249 2309 7.059788 ACCAATTTTGATTTAGGGCAACTTTT 58.940 30.769 0.00 0.00 0.00 2.27
2300 2360 5.918426 AGTGCTAAACTTCTACTACCTCC 57.082 43.478 0.00 0.00 34.57 4.30
2301 2361 4.398673 AGTGCTAAACTTCTACTACCTCCG 59.601 45.833 0.00 0.00 34.57 4.63
2302 2362 4.157472 GTGCTAAACTTCTACTACCTCCGT 59.843 45.833 0.00 0.00 0.00 4.69
2303 2363 4.397417 TGCTAAACTTCTACTACCTCCGTC 59.603 45.833 0.00 0.00 0.00 4.79
2304 2364 4.639755 GCTAAACTTCTACTACCTCCGTCT 59.360 45.833 0.00 0.00 0.00 4.18
2305 2365 5.819901 GCTAAACTTCTACTACCTCCGTCTA 59.180 44.000 0.00 0.00 0.00 2.59
2306 2366 6.018016 GCTAAACTTCTACTACCTCCGTCTAG 60.018 46.154 0.00 0.00 0.00 2.43
2307 2367 4.420522 ACTTCTACTACCTCCGTCTAGG 57.579 50.000 0.00 0.00 42.82 3.02
2318 2378 3.552875 CTCCGTCTAGGTGGATAAGTCA 58.447 50.000 4.59 0.00 41.99 3.41
2319 2379 4.145807 CTCCGTCTAGGTGGATAAGTCAT 58.854 47.826 4.59 0.00 41.99 3.06
2320 2380 4.543689 TCCGTCTAGGTGGATAAGTCATT 58.456 43.478 0.27 0.00 41.99 2.57
2321 2381 4.583489 TCCGTCTAGGTGGATAAGTCATTC 59.417 45.833 0.27 0.00 41.99 2.67
2322 2382 4.537965 CGTCTAGGTGGATAAGTCATTCG 58.462 47.826 0.00 0.00 0.00 3.34
2323 2383 4.299978 GTCTAGGTGGATAAGTCATTCGC 58.700 47.826 0.00 0.00 0.00 4.70
2324 2384 3.958147 TCTAGGTGGATAAGTCATTCGCA 59.042 43.478 0.00 0.00 0.00 5.10
2325 2385 3.845781 AGGTGGATAAGTCATTCGCAT 57.154 42.857 0.00 0.00 0.00 4.73
2326 2386 4.955811 AGGTGGATAAGTCATTCGCATA 57.044 40.909 0.00 0.00 0.00 3.14
2327 2387 4.887748 AGGTGGATAAGTCATTCGCATAG 58.112 43.478 0.00 0.00 0.00 2.23
2328 2388 4.345257 AGGTGGATAAGTCATTCGCATAGT 59.655 41.667 0.00 0.00 0.00 2.12
2329 2389 5.057149 GGTGGATAAGTCATTCGCATAGTT 58.943 41.667 0.00 0.00 0.00 2.24
2330 2390 5.177696 GGTGGATAAGTCATTCGCATAGTTC 59.822 44.000 0.00 0.00 0.00 3.01
2331 2391 5.986135 GTGGATAAGTCATTCGCATAGTTCT 59.014 40.000 0.00 0.00 0.00 3.01
2332 2392 7.145985 GTGGATAAGTCATTCGCATAGTTCTA 58.854 38.462 0.00 0.00 0.00 2.10
2333 2393 7.327275 GTGGATAAGTCATTCGCATAGTTCTAG 59.673 40.741 0.00 0.00 0.00 2.43
2334 2394 6.809196 GGATAAGTCATTCGCATAGTTCTAGG 59.191 42.308 0.00 0.00 0.00 3.02
2335 2395 5.599999 AAGTCATTCGCATAGTTCTAGGT 57.400 39.130 0.00 0.00 0.00 3.08
2336 2396 5.189659 AGTCATTCGCATAGTTCTAGGTC 57.810 43.478 0.00 0.00 0.00 3.85
2337 2397 3.975670 GTCATTCGCATAGTTCTAGGTCG 59.024 47.826 0.00 0.00 0.00 4.79
2338 2398 3.881089 TCATTCGCATAGTTCTAGGTCGA 59.119 43.478 0.00 6.82 0.00 4.20
2339 2399 3.687572 TTCGCATAGTTCTAGGTCGAC 57.312 47.619 7.13 7.13 0.00 4.20
2340 2400 2.635714 TCGCATAGTTCTAGGTCGACA 58.364 47.619 18.91 0.00 0.00 4.35
2341 2401 3.011818 TCGCATAGTTCTAGGTCGACAA 58.988 45.455 18.91 3.61 0.00 3.18
2342 2402 3.630769 TCGCATAGTTCTAGGTCGACAAT 59.369 43.478 18.91 7.85 0.00 2.71
2343 2403 4.097437 TCGCATAGTTCTAGGTCGACAATT 59.903 41.667 18.91 4.78 0.00 2.32
2344 2404 4.804139 CGCATAGTTCTAGGTCGACAATTT 59.196 41.667 18.91 2.13 0.00 1.82
2345 2405 5.975344 CGCATAGTTCTAGGTCGACAATTTA 59.025 40.000 18.91 3.24 0.00 1.40
2346 2406 6.474427 CGCATAGTTCTAGGTCGACAATTTAA 59.526 38.462 18.91 1.74 0.00 1.52
2347 2407 7.514747 CGCATAGTTCTAGGTCGACAATTTAAC 60.515 40.741 18.91 13.65 0.00 2.01
2348 2408 7.491696 GCATAGTTCTAGGTCGACAATTTAACT 59.508 37.037 18.91 19.25 0.00 2.24
2352 2412 8.968969 AGTTCTAGGTCGACAATTTAACTATCT 58.031 33.333 18.91 2.88 0.00 1.98
2417 2477 5.147330 ACATCCGTGTAGAAATCTTGTGA 57.853 39.130 0.00 0.00 36.63 3.58
2418 2478 5.734720 ACATCCGTGTAGAAATCTTGTGAT 58.265 37.500 0.00 0.00 36.63 3.06
2419 2479 6.873997 ACATCCGTGTAGAAATCTTGTGATA 58.126 36.000 0.00 0.00 36.63 2.15
2420 2480 7.500992 ACATCCGTGTAGAAATCTTGTGATAT 58.499 34.615 0.00 0.00 36.63 1.63
2421 2481 8.638873 ACATCCGTGTAGAAATCTTGTGATATA 58.361 33.333 0.00 0.00 36.63 0.86
2422 2482 8.916654 CATCCGTGTAGAAATCTTGTGATATAC 58.083 37.037 0.00 0.00 31.70 1.47
2423 2483 8.234136 TCCGTGTAGAAATCTTGTGATATACT 57.766 34.615 0.00 0.00 31.70 2.12
2424 2484 8.692710 TCCGTGTAGAAATCTTGTGATATACTT 58.307 33.333 0.00 0.00 31.70 2.24
2425 2485 9.314321 CCGTGTAGAAATCTTGTGATATACTTT 57.686 33.333 0.00 0.00 31.70 2.66
2467 2527 9.831737 CATATTTAATTCCTCAAATCGATGACC 57.168 33.333 0.00 0.00 0.00 4.02
2468 2528 9.799106 ATATTTAATTCCTCAAATCGATGACCT 57.201 29.630 0.00 0.00 0.00 3.85
2470 2530 8.662781 TTTAATTCCTCAAATCGATGACCTAG 57.337 34.615 0.00 0.00 0.00 3.02
2471 2531 6.485830 AATTCCTCAAATCGATGACCTAGA 57.514 37.500 0.00 0.00 0.00 2.43
2472 2532 5.932619 TTCCTCAAATCGATGACCTAGAA 57.067 39.130 0.00 0.00 0.00 2.10
2473 2533 5.263968 TCCTCAAATCGATGACCTAGAAC 57.736 43.478 0.00 0.00 0.00 3.01
2474 2534 4.956700 TCCTCAAATCGATGACCTAGAACT 59.043 41.667 0.00 0.00 0.00 3.01
2475 2535 6.127101 TCCTCAAATCGATGACCTAGAACTA 58.873 40.000 0.00 0.00 0.00 2.24
2476 2536 6.039493 TCCTCAAATCGATGACCTAGAACTAC 59.961 42.308 0.00 0.00 0.00 2.73
2477 2537 5.817988 TCAAATCGATGACCTAGAACTACG 58.182 41.667 0.00 0.00 0.00 3.51
2478 2538 3.900388 ATCGATGACCTAGAACTACGC 57.100 47.619 0.00 0.00 0.00 4.42
2479 2539 1.596260 TCGATGACCTAGAACTACGCG 59.404 52.381 3.53 3.53 0.00 6.01
2480 2540 1.596260 CGATGACCTAGAACTACGCGA 59.404 52.381 15.93 0.00 0.00 5.87
2481 2541 2.031314 CGATGACCTAGAACTACGCGAA 59.969 50.000 15.93 0.00 0.00 4.70
2482 2542 3.303857 CGATGACCTAGAACTACGCGAAT 60.304 47.826 15.93 0.00 0.00 3.34
2483 2543 3.416119 TGACCTAGAACTACGCGAATG 57.584 47.619 15.93 4.47 0.00 2.67
2484 2544 3.011818 TGACCTAGAACTACGCGAATGA 58.988 45.455 15.93 0.00 0.00 2.57
2485 2545 3.181503 TGACCTAGAACTACGCGAATGAC 60.182 47.826 15.93 0.66 0.00 3.06
2486 2546 3.015327 ACCTAGAACTACGCGAATGACT 58.985 45.455 15.93 9.07 0.00 3.41
2487 2547 3.442977 ACCTAGAACTACGCGAATGACTT 59.557 43.478 15.93 0.00 0.00 3.01
2488 2548 4.637534 ACCTAGAACTACGCGAATGACTTA 59.362 41.667 15.93 0.00 0.00 2.24
2489 2549 5.298777 ACCTAGAACTACGCGAATGACTTAT 59.701 40.000 15.93 0.00 0.00 1.73
2490 2550 6.183360 ACCTAGAACTACGCGAATGACTTATT 60.183 38.462 15.93 0.00 0.00 1.40
2491 2551 6.360148 CCTAGAACTACGCGAATGACTTATTC 59.640 42.308 15.93 3.24 41.46 1.75
2500 2560 4.637574 GAATGACTTATTCGCCGAGATG 57.362 45.455 0.00 0.00 36.16 2.90
2501 2561 2.509052 TGACTTATTCGCCGAGATGG 57.491 50.000 0.00 0.00 42.50 3.51
2502 2562 2.028876 TGACTTATTCGCCGAGATGGA 58.971 47.619 0.00 0.00 42.00 3.41
2503 2563 2.034685 TGACTTATTCGCCGAGATGGAG 59.965 50.000 0.00 0.00 42.00 3.86
2504 2564 1.341531 ACTTATTCGCCGAGATGGAGG 59.658 52.381 0.00 0.00 42.00 4.30
2505 2565 1.341531 CTTATTCGCCGAGATGGAGGT 59.658 52.381 0.00 0.00 42.00 3.85
2506 2566 2.281539 TATTCGCCGAGATGGAGGTA 57.718 50.000 0.00 0.00 42.00 3.08
2507 2567 0.962489 ATTCGCCGAGATGGAGGTAG 59.038 55.000 0.00 0.00 42.00 3.18
2508 2568 0.395311 TTCGCCGAGATGGAGGTAGT 60.395 55.000 0.00 0.00 42.00 2.73
2509 2569 0.471191 TCGCCGAGATGGAGGTAGTA 59.529 55.000 0.00 0.00 42.00 1.82
2510 2570 0.875728 CGCCGAGATGGAGGTAGTAG 59.124 60.000 0.00 0.00 42.00 2.57
2511 2571 1.814634 CGCCGAGATGGAGGTAGTAGT 60.815 57.143 0.00 0.00 42.00 2.73
2512 2572 2.549563 CGCCGAGATGGAGGTAGTAGTA 60.550 54.545 0.00 0.00 42.00 1.82
2513 2573 3.688235 GCCGAGATGGAGGTAGTAGTAT 58.312 50.000 0.00 0.00 42.00 2.12
2514 2574 4.622457 CGCCGAGATGGAGGTAGTAGTATA 60.622 50.000 0.00 0.00 42.00 1.47
2515 2575 5.438833 GCCGAGATGGAGGTAGTAGTATAT 58.561 45.833 0.00 0.00 42.00 0.86
2516 2576 5.887035 GCCGAGATGGAGGTAGTAGTATATT 59.113 44.000 0.00 0.00 42.00 1.28
2517 2577 6.377712 GCCGAGATGGAGGTAGTAGTATATTT 59.622 42.308 0.00 0.00 42.00 1.40
2567 2627 0.107165 GTGCCCACAGAACCCTATCC 60.107 60.000 0.00 0.00 0.00 2.59
2573 2633 0.042131 ACAGAACCCTATCCACGGGA 59.958 55.000 1.44 0.00 44.90 5.14
2585 2646 2.999063 ACGGGAAGGTGGGGTACG 60.999 66.667 0.00 0.00 0.00 3.67
2599 2660 1.869774 GGTACGTCGACCCAAAAACT 58.130 50.000 10.58 0.00 32.88 2.66
2600 2661 3.025287 GGTACGTCGACCCAAAAACTA 57.975 47.619 10.58 0.00 32.88 2.24
2601 2662 3.588955 GGTACGTCGACCCAAAAACTAT 58.411 45.455 10.58 0.00 32.88 2.12
2602 2663 4.743493 GGTACGTCGACCCAAAAACTATA 58.257 43.478 10.58 0.00 32.88 1.31
2607 2668 5.464389 ACGTCGACCCAAAAACTATATATGC 59.536 40.000 10.58 0.00 0.00 3.14
2629 2690 2.224159 GGCCTTGTCTCCTCCCACA 61.224 63.158 0.00 0.00 0.00 4.17
2638 2699 1.427753 TCTCCTCCCACACACACTCTA 59.572 52.381 0.00 0.00 0.00 2.43
2639 2700 2.043115 TCTCCTCCCACACACACTCTAT 59.957 50.000 0.00 0.00 0.00 1.98
2640 2701 3.268595 TCTCCTCCCACACACACTCTATA 59.731 47.826 0.00 0.00 0.00 1.31
2641 2702 4.023980 CTCCTCCCACACACACTCTATAA 58.976 47.826 0.00 0.00 0.00 0.98
2643 2704 4.405680 TCCTCCCACACACACTCTATAATG 59.594 45.833 0.00 0.00 0.00 1.90
2645 2706 4.101114 TCCCACACACACTCTATAATGGT 58.899 43.478 0.00 0.00 0.00 3.55
2648 2709 4.635765 CCACACACACTCTATAATGGTTGG 59.364 45.833 0.00 0.00 0.00 3.77
2651 2712 4.572389 CACACACTCTATAATGGTTGGCTC 59.428 45.833 0.00 0.00 0.00 4.70
2652 2713 4.225042 ACACACTCTATAATGGTTGGCTCA 59.775 41.667 0.00 0.00 0.00 4.26
2656 2717 6.057533 CACTCTATAATGGTTGGCTCATTCA 58.942 40.000 5.00 0.00 36.40 2.57
2657 2718 6.017605 CACTCTATAATGGTTGGCTCATTCAC 60.018 42.308 5.00 0.00 36.40 3.18
2660 2721 2.885135 ATGGTTGGCTCATTCACTGA 57.115 45.000 0.00 0.00 0.00 3.41
2661 2722 2.885135 TGGTTGGCTCATTCACTGAT 57.115 45.000 0.00 0.00 32.10 2.90
2720 2781 2.791170 GCCTTCTGCCCAGAATCAG 58.209 57.895 10.83 5.20 45.40 2.90
2726 2787 4.496336 GCCCAGAATCAGGCGGCT 62.496 66.667 5.25 5.25 39.87 5.52
2730 2791 3.077556 AGAATCAGGCGGCTCCGT 61.078 61.111 9.32 0.00 42.09 4.69
2768 2829 5.921408 CGAAGTTCTGCTATAAGGGTGATAC 59.079 44.000 0.56 0.00 0.00 2.24
2808 2869 1.671845 GTCGGACTGATAGTCGAAGCT 59.328 52.381 0.00 0.00 45.96 3.74
2814 2875 2.278857 ATAGTCGAAGCTGCGGCG 60.279 61.111 14.20 0.51 41.49 6.46
2846 2907 2.607750 TCTCCCTGGTGGTGGAGC 60.608 66.667 0.62 0.00 46.39 4.70
2904 2965 7.922811 GGGGTATTGATGATGATCTTGTTTTTC 59.077 37.037 0.00 0.00 0.00 2.29
3029 3091 8.889717 TCGGTTTGATTTACAATCCTAATCTTC 58.110 33.333 0.00 0.00 42.79 2.87
3040 3102 3.094572 TCCTAATCTTCGAAACCGGTCT 58.905 45.455 8.04 0.00 0.00 3.85
3092 3154 5.533154 TGAAAAGACAACCATGGTATCGTTT 59.467 36.000 27.90 27.90 0.00 3.60
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.488683 AGAAAATTCATACCAAACGAAGTCCA 59.511 34.615 0.00 0.00 45.00 4.02
1 2 6.801862 CAGAAAATTCATACCAAACGAAGTCC 59.198 38.462 0.00 0.00 45.00 3.85
2 3 6.305638 GCAGAAAATTCATACCAAACGAAGTC 59.694 38.462 0.00 0.00 45.00 3.01
4 5 5.283717 CGCAGAAAATTCATACCAAACGAAG 59.716 40.000 0.00 0.00 0.00 3.79
5 6 5.049336 TCGCAGAAAATTCATACCAAACGAA 60.049 36.000 0.00 0.00 0.00 3.85
6 7 4.452795 TCGCAGAAAATTCATACCAAACGA 59.547 37.500 0.00 0.00 0.00 3.85
7 8 4.717991 TCGCAGAAAATTCATACCAAACG 58.282 39.130 0.00 0.00 0.00 3.60
8 9 6.419413 TGTTTCGCAGAAAATTCATACCAAAC 59.581 34.615 5.51 0.00 45.90 2.93
9 10 6.507900 TGTTTCGCAGAAAATTCATACCAAA 58.492 32.000 5.51 0.00 45.90 3.28
10 11 6.078202 TGTTTCGCAGAAAATTCATACCAA 57.922 33.333 5.51 0.00 45.90 3.67
11 12 5.697473 TGTTTCGCAGAAAATTCATACCA 57.303 34.783 5.51 0.00 45.90 3.25
12 13 6.378582 TCTTGTTTCGCAGAAAATTCATACC 58.621 36.000 5.51 0.00 45.90 2.73
13 14 9.000018 GTATCTTGTTTCGCAGAAAATTCATAC 58.000 33.333 5.51 6.85 45.90 2.39
14 15 8.726068 TGTATCTTGTTTCGCAGAAAATTCATA 58.274 29.630 5.51 0.38 45.90 2.15
15 16 7.592938 TGTATCTTGTTTCGCAGAAAATTCAT 58.407 30.769 5.51 1.08 45.90 2.57
16 17 6.964908 TGTATCTTGTTTCGCAGAAAATTCA 58.035 32.000 5.51 0.00 45.90 2.57
17 18 7.461938 GCATGTATCTTGTTTCGCAGAAAATTC 60.462 37.037 5.51 0.00 45.90 2.17
18 19 6.308766 GCATGTATCTTGTTTCGCAGAAAATT 59.691 34.615 5.51 0.00 45.90 1.82
19 20 5.801947 GCATGTATCTTGTTTCGCAGAAAAT 59.198 36.000 5.51 0.32 45.90 1.82
20 21 5.153513 GCATGTATCTTGTTTCGCAGAAAA 58.846 37.500 5.51 0.00 45.90 2.29
21 22 4.379394 GGCATGTATCTTGTTTCGCAGAAA 60.379 41.667 0.00 0.55 45.90 2.52
22 23 3.126858 GGCATGTATCTTGTTTCGCAGAA 59.873 43.478 0.00 0.00 45.90 3.02
23 24 2.677836 GGCATGTATCTTGTTTCGCAGA 59.322 45.455 0.00 0.00 0.00 4.26
24 25 2.537529 CGGCATGTATCTTGTTTCGCAG 60.538 50.000 0.00 0.00 0.00 5.18
25 26 1.396648 CGGCATGTATCTTGTTTCGCA 59.603 47.619 0.00 0.00 0.00 5.10
26 27 1.856014 GCGGCATGTATCTTGTTTCGC 60.856 52.381 0.00 0.00 0.00 4.70
27 28 1.396648 TGCGGCATGTATCTTGTTTCG 59.603 47.619 0.00 0.00 0.00 3.46
28 29 3.485947 TTGCGGCATGTATCTTGTTTC 57.514 42.857 2.28 0.00 0.00 2.78
29 30 3.005261 TGTTTGCGGCATGTATCTTGTTT 59.995 39.130 2.28 0.00 0.00 2.83
30 31 2.556189 TGTTTGCGGCATGTATCTTGTT 59.444 40.909 2.28 0.00 0.00 2.83
31 32 2.158559 TGTTTGCGGCATGTATCTTGT 58.841 42.857 2.28 0.00 0.00 3.16
32 33 2.478370 CCTGTTTGCGGCATGTATCTTG 60.478 50.000 2.28 0.00 0.00 3.02
33 34 1.745087 CCTGTTTGCGGCATGTATCTT 59.255 47.619 2.28 0.00 0.00 2.40
34 35 1.065491 TCCTGTTTGCGGCATGTATCT 60.065 47.619 2.28 0.00 0.00 1.98
35 36 1.378531 TCCTGTTTGCGGCATGTATC 58.621 50.000 2.28 0.00 0.00 2.24
36 37 1.832883 TTCCTGTTTGCGGCATGTAT 58.167 45.000 2.28 0.00 0.00 2.29
37 38 1.610363 TTTCCTGTTTGCGGCATGTA 58.390 45.000 2.28 0.00 0.00 2.29
38 39 0.968405 ATTTCCTGTTTGCGGCATGT 59.032 45.000 2.28 0.00 0.00 3.21
39 40 1.067706 TCATTTCCTGTTTGCGGCATG 60.068 47.619 2.28 0.00 0.00 4.06
40 41 1.067635 GTCATTTCCTGTTTGCGGCAT 60.068 47.619 2.28 0.00 0.00 4.40
41 42 0.313672 GTCATTTCCTGTTTGCGGCA 59.686 50.000 0.00 0.00 0.00 5.69
42 43 0.313672 TGTCATTTCCTGTTTGCGGC 59.686 50.000 0.00 0.00 0.00 6.53
43 44 2.988493 CAATGTCATTTCCTGTTTGCGG 59.012 45.455 0.00 0.00 0.00 5.69
44 45 2.988493 CCAATGTCATTTCCTGTTTGCG 59.012 45.455 0.00 0.00 0.00 4.85
45 46 3.328505 CCCAATGTCATTTCCTGTTTGC 58.671 45.455 0.00 0.00 0.00 3.68
46 47 3.244146 TGCCCAATGTCATTTCCTGTTTG 60.244 43.478 0.00 0.00 0.00 2.93
47 48 2.971330 TGCCCAATGTCATTTCCTGTTT 59.029 40.909 0.00 0.00 0.00 2.83
48 49 2.299867 GTGCCCAATGTCATTTCCTGTT 59.700 45.455 0.00 0.00 0.00 3.16
49 50 1.895131 GTGCCCAATGTCATTTCCTGT 59.105 47.619 0.00 0.00 0.00 4.00
50 51 2.094390 CAGTGCCCAATGTCATTTCCTG 60.094 50.000 0.00 0.00 0.00 3.86
51 52 2.173519 CAGTGCCCAATGTCATTTCCT 58.826 47.619 0.00 0.00 0.00 3.36
52 53 1.205417 CCAGTGCCCAATGTCATTTCC 59.795 52.381 0.00 0.00 0.00 3.13
53 54 2.170166 TCCAGTGCCCAATGTCATTTC 58.830 47.619 0.00 0.00 0.00 2.17
54 55 2.307496 TCCAGTGCCCAATGTCATTT 57.693 45.000 0.00 0.00 0.00 2.32
55 56 2.537633 ATCCAGTGCCCAATGTCATT 57.462 45.000 0.00 0.00 0.00 2.57
56 57 2.537633 AATCCAGTGCCCAATGTCAT 57.462 45.000 0.00 0.00 0.00 3.06
57 58 3.448093 TTAATCCAGTGCCCAATGTCA 57.552 42.857 0.00 0.00 0.00 3.58
58 59 5.536161 ACATATTAATCCAGTGCCCAATGTC 59.464 40.000 0.00 0.00 0.00 3.06
59 60 5.457686 ACATATTAATCCAGTGCCCAATGT 58.542 37.500 0.00 0.00 0.00 2.71
60 61 6.409524 AACATATTAATCCAGTGCCCAATG 57.590 37.500 0.00 0.00 0.00 2.82
61 62 7.297614 ACTAACATATTAATCCAGTGCCCAAT 58.702 34.615 0.00 0.00 0.00 3.16
62 63 6.668645 ACTAACATATTAATCCAGTGCCCAA 58.331 36.000 0.00 0.00 0.00 4.12
63 64 6.260700 ACTAACATATTAATCCAGTGCCCA 57.739 37.500 0.00 0.00 0.00 5.36
64 65 6.770785 TGAACTAACATATTAATCCAGTGCCC 59.229 38.462 0.00 0.00 0.00 5.36
65 66 7.801716 TGAACTAACATATTAATCCAGTGCC 57.198 36.000 0.00 0.00 0.00 5.01
66 67 9.109393 TCTTGAACTAACATATTAATCCAGTGC 57.891 33.333 0.00 0.00 0.00 4.40
170 171 2.607282 GCAGGTATGGGATACGTCTTCG 60.607 54.545 0.00 0.00 43.34 3.79
171 172 2.628657 AGCAGGTATGGGATACGTCTTC 59.371 50.000 0.00 0.00 36.61 2.87
172 173 2.679082 AGCAGGTATGGGATACGTCTT 58.321 47.619 0.00 0.00 36.61 3.01
173 174 2.365617 CAAGCAGGTATGGGATACGTCT 59.634 50.000 0.00 0.00 36.61 4.18
174 175 2.755650 CAAGCAGGTATGGGATACGTC 58.244 52.381 0.00 0.00 36.61 4.34
175 176 1.202651 GCAAGCAGGTATGGGATACGT 60.203 52.381 0.00 0.00 36.61 3.57
176 177 1.512926 GCAAGCAGGTATGGGATACG 58.487 55.000 0.00 0.00 36.61 3.06
177 178 1.142870 TGGCAAGCAGGTATGGGATAC 59.857 52.381 0.00 0.00 35.00 2.24
178 179 1.142870 GTGGCAAGCAGGTATGGGATA 59.857 52.381 0.00 0.00 0.00 2.59
179 180 0.106519 GTGGCAAGCAGGTATGGGAT 60.107 55.000 0.00 0.00 0.00 3.85
180 181 1.302949 GTGGCAAGCAGGTATGGGA 59.697 57.895 0.00 0.00 0.00 4.37
181 182 0.611618 TTGTGGCAAGCAGGTATGGG 60.612 55.000 0.00 0.00 0.00 4.00
182 183 1.067635 GTTTGTGGCAAGCAGGTATGG 60.068 52.381 0.00 0.00 0.00 2.74
183 184 1.067635 GGTTTGTGGCAAGCAGGTATG 60.068 52.381 0.00 0.00 0.00 2.39
184 185 1.256812 GGTTTGTGGCAAGCAGGTAT 58.743 50.000 0.00 0.00 0.00 2.73
185 186 0.106469 TGGTTTGTGGCAAGCAGGTA 60.106 50.000 0.00 0.00 0.00 3.08
186 187 1.381056 TGGTTTGTGGCAAGCAGGT 60.381 52.632 0.00 0.00 0.00 4.00
187 188 1.067916 GTGGTTTGTGGCAAGCAGG 59.932 57.895 0.00 0.00 0.00 4.85
188 189 1.299316 CGTGGTTTGTGGCAAGCAG 60.299 57.895 0.00 0.00 0.00 4.24
189 190 2.804167 CGTGGTTTGTGGCAAGCA 59.196 55.556 0.00 0.00 0.00 3.91
190 191 2.658268 GCGTGGTTTGTGGCAAGC 60.658 61.111 0.00 0.00 0.00 4.01
191 192 1.588667 GTGCGTGGTTTGTGGCAAG 60.589 57.895 0.00 0.00 37.12 4.01
192 193 1.999071 GAGTGCGTGGTTTGTGGCAA 61.999 55.000 0.00 0.00 37.12 4.52
193 194 2.439338 AGTGCGTGGTTTGTGGCA 60.439 55.556 0.00 0.00 0.00 4.92
194 195 2.331451 GAGTGCGTGGTTTGTGGC 59.669 61.111 0.00 0.00 0.00 5.01
195 196 1.648720 CTGAGTGCGTGGTTTGTGG 59.351 57.895 0.00 0.00 0.00 4.17
196 197 1.009675 GCTGAGTGCGTGGTTTGTG 60.010 57.895 0.00 0.00 0.00 3.33
197 198 1.451207 TGCTGAGTGCGTGGTTTGT 60.451 52.632 0.00 0.00 46.63 2.83
198 199 1.009675 GTGCTGAGTGCGTGGTTTG 60.010 57.895 0.00 0.00 46.63 2.93
199 200 1.451207 TGTGCTGAGTGCGTGGTTT 60.451 52.632 0.00 0.00 46.63 3.27
200 201 2.180204 GTGTGCTGAGTGCGTGGTT 61.180 57.895 0.00 0.00 46.63 3.67
201 202 2.588877 GTGTGCTGAGTGCGTGGT 60.589 61.111 0.00 0.00 46.63 4.16
202 203 3.705638 CGTGTGCTGAGTGCGTGG 61.706 66.667 0.00 0.00 46.63 4.94
203 204 2.658268 TCGTGTGCTGAGTGCGTG 60.658 61.111 0.00 0.00 46.63 5.34
204 205 2.658593 GTCGTGTGCTGAGTGCGT 60.659 61.111 0.00 0.00 46.63 5.24
205 206 2.355126 AGTCGTGTGCTGAGTGCG 60.355 61.111 0.00 0.00 46.63 5.34
206 207 2.313172 CCAGTCGTGTGCTGAGTGC 61.313 63.158 0.00 0.00 43.25 4.40
207 208 2.313172 GCCAGTCGTGTGCTGAGTG 61.313 63.158 0.00 0.00 36.12 3.51
208 209 2.029666 GCCAGTCGTGTGCTGAGT 59.970 61.111 0.00 0.00 36.12 3.41
209 210 2.740055 GGCCAGTCGTGTGCTGAG 60.740 66.667 0.00 0.00 36.12 3.35
210 211 2.786539 GATGGCCAGTCGTGTGCTGA 62.787 60.000 13.05 0.00 36.12 4.26
211 212 2.359107 ATGGCCAGTCGTGTGCTG 60.359 61.111 13.05 0.00 0.00 4.41
212 213 2.046892 GATGGCCAGTCGTGTGCT 60.047 61.111 13.05 0.00 0.00 4.40
213 214 1.639298 GAAGATGGCCAGTCGTGTGC 61.639 60.000 13.05 0.00 0.00 4.57
214 215 1.021390 GGAAGATGGCCAGTCGTGTG 61.021 60.000 13.05 0.00 0.00 3.82
215 216 1.296715 GGAAGATGGCCAGTCGTGT 59.703 57.895 13.05 0.00 0.00 4.49
216 217 0.742281 CTGGAAGATGGCCAGTCGTG 60.742 60.000 13.05 1.37 46.19 4.35
217 218 1.599047 CTGGAAGATGGCCAGTCGT 59.401 57.895 13.05 7.45 46.19 4.34
218 219 4.528674 CTGGAAGATGGCCAGTCG 57.471 61.111 13.05 0.00 46.19 4.18
229 230 1.783031 GCATCGGCAGCATCTGGAAG 61.783 60.000 0.00 0.00 40.72 3.46
230 231 1.820906 GCATCGGCAGCATCTGGAA 60.821 57.895 0.00 0.00 40.72 3.53
231 232 2.203112 GCATCGGCAGCATCTGGA 60.203 61.111 0.00 0.00 40.72 3.86
241 242 0.527565 AGATTGTGGTTTGCATCGGC 59.472 50.000 0.00 0.00 41.68 5.54
242 243 1.733389 GCAGATTGTGGTTTGCATCGG 60.733 52.381 0.00 0.00 36.59 4.18
243 244 1.621107 GCAGATTGTGGTTTGCATCG 58.379 50.000 0.00 0.00 36.59 3.84
244 245 1.068333 ACGCAGATTGTGGTTTGCATC 60.068 47.619 0.00 0.00 36.37 3.91
245 246 0.961019 ACGCAGATTGTGGTTTGCAT 59.039 45.000 0.00 0.00 36.37 3.96
246 247 0.310543 GACGCAGATTGTGGTTTGCA 59.689 50.000 0.00 0.00 36.37 4.08
247 248 0.387239 GGACGCAGATTGTGGTTTGC 60.387 55.000 0.00 0.00 30.87 3.68
248 249 0.950836 TGGACGCAGATTGTGGTTTG 59.049 50.000 0.00 0.00 30.87 2.93
249 250 0.951558 GTGGACGCAGATTGTGGTTT 59.048 50.000 0.00 0.00 30.87 3.27
250 251 0.108585 AGTGGACGCAGATTGTGGTT 59.891 50.000 0.00 0.00 30.87 3.67
251 252 0.320771 GAGTGGACGCAGATTGTGGT 60.321 55.000 0.00 0.00 30.87 4.16
252 253 1.021390 GGAGTGGACGCAGATTGTGG 61.021 60.000 0.00 0.00 30.87 4.17
253 254 0.036952 AGGAGTGGACGCAGATTGTG 60.037 55.000 0.00 0.00 0.00 3.33
254 255 1.478510 CTAGGAGTGGACGCAGATTGT 59.521 52.381 0.00 0.00 0.00 2.71
255 256 1.751351 TCTAGGAGTGGACGCAGATTG 59.249 52.381 0.00 0.00 0.00 2.67
256 257 1.751924 GTCTAGGAGTGGACGCAGATT 59.248 52.381 0.00 0.00 0.00 2.40
257 258 1.341089 TGTCTAGGAGTGGACGCAGAT 60.341 52.381 0.00 0.00 36.98 2.90
258 259 0.037734 TGTCTAGGAGTGGACGCAGA 59.962 55.000 0.00 0.00 36.98 4.26
259 260 0.888619 TTGTCTAGGAGTGGACGCAG 59.111 55.000 0.00 0.00 36.98 5.18
260 261 0.601558 GTTGTCTAGGAGTGGACGCA 59.398 55.000 0.00 0.00 36.98 5.24
261 262 0.108756 GGTTGTCTAGGAGTGGACGC 60.109 60.000 0.00 0.00 36.98 5.19
262 263 1.473278 GAGGTTGTCTAGGAGTGGACG 59.527 57.143 0.00 0.00 36.98 4.79
263 264 1.826096 GGAGGTTGTCTAGGAGTGGAC 59.174 57.143 0.00 0.00 34.78 4.02
264 265 1.273098 GGGAGGTTGTCTAGGAGTGGA 60.273 57.143 0.00 0.00 0.00 4.02
265 266 1.196012 GGGAGGTTGTCTAGGAGTGG 58.804 60.000 0.00 0.00 0.00 4.00
266 267 1.938585 TGGGAGGTTGTCTAGGAGTG 58.061 55.000 0.00 0.00 0.00 3.51
267 268 2.541466 CTTGGGAGGTTGTCTAGGAGT 58.459 52.381 0.00 0.00 0.00 3.85
268 269 1.208293 GCTTGGGAGGTTGTCTAGGAG 59.792 57.143 0.00 0.00 0.00 3.69
269 270 1.203313 AGCTTGGGAGGTTGTCTAGGA 60.203 52.381 0.00 0.00 0.00 2.94
270 271 1.208293 GAGCTTGGGAGGTTGTCTAGG 59.792 57.143 0.00 0.00 32.79 3.02
271 272 1.208293 GGAGCTTGGGAGGTTGTCTAG 59.792 57.143 0.00 0.00 32.79 2.43
272 273 1.276622 GGAGCTTGGGAGGTTGTCTA 58.723 55.000 0.00 0.00 32.79 2.59
273 274 1.831652 CGGAGCTTGGGAGGTTGTCT 61.832 60.000 0.00 0.00 32.79 3.41
274 275 1.376037 CGGAGCTTGGGAGGTTGTC 60.376 63.158 0.00 0.00 32.79 3.18
275 276 2.750350 CGGAGCTTGGGAGGTTGT 59.250 61.111 0.00 0.00 32.79 3.32
293 294 4.389576 GTTTGCTCCAGCGCCACG 62.390 66.667 2.29 0.00 45.83 4.94
294 295 4.389576 CGTTTGCTCCAGCGCCAC 62.390 66.667 2.29 0.00 45.83 5.01
299 300 4.090057 GACGGCGTTTGCTCCAGC 62.090 66.667 16.19 0.00 42.25 4.85
300 301 3.777925 CGACGGCGTTTGCTCCAG 61.778 66.667 16.19 0.00 42.25 3.86
303 304 4.007940 TTGCGACGGCGTTTGCTC 62.008 61.111 29.28 11.79 44.10 4.26
304 305 4.307908 GTTGCGACGGCGTTTGCT 62.308 61.111 29.28 3.22 44.10 3.91
325 326 0.389757 GACTTGTATCCTCGGGCTCC 59.610 60.000 0.00 0.00 0.00 4.70
326 327 0.389757 GGACTTGTATCCTCGGGCTC 59.610 60.000 0.00 0.00 35.68 4.70
327 328 0.325296 TGGACTTGTATCCTCGGGCT 60.325 55.000 0.00 0.00 39.75 5.19
328 329 0.179081 GTGGACTTGTATCCTCGGGC 60.179 60.000 0.00 0.00 39.75 6.13
329 330 0.464452 GGTGGACTTGTATCCTCGGG 59.536 60.000 0.00 0.00 39.75 5.14
330 331 1.134788 GTGGTGGACTTGTATCCTCGG 60.135 57.143 0.00 0.00 39.75 4.63
331 332 1.469251 CGTGGTGGACTTGTATCCTCG 60.469 57.143 0.00 0.00 39.75 4.63
332 333 1.822990 TCGTGGTGGACTTGTATCCTC 59.177 52.381 0.00 0.00 39.75 3.71
333 334 1.825474 CTCGTGGTGGACTTGTATCCT 59.175 52.381 0.00 0.00 39.75 3.24
334 335 1.134788 CCTCGTGGTGGACTTGTATCC 60.135 57.143 0.00 0.00 39.45 2.59
335 336 1.822990 TCCTCGTGGTGGACTTGTATC 59.177 52.381 2.99 0.00 34.23 2.24
336 337 1.933021 TCCTCGTGGTGGACTTGTAT 58.067 50.000 2.99 0.00 34.23 2.29
337 338 1.548719 CATCCTCGTGGTGGACTTGTA 59.451 52.381 2.99 0.00 36.30 2.41
338 339 0.321671 CATCCTCGTGGTGGACTTGT 59.678 55.000 2.99 0.00 36.30 3.16
339 340 1.021390 GCATCCTCGTGGTGGACTTG 61.021 60.000 2.99 0.00 36.30 3.16
340 341 1.296715 GCATCCTCGTGGTGGACTT 59.703 57.895 2.99 0.00 36.30 3.01
341 342 2.660064 GGCATCCTCGTGGTGGACT 61.660 63.158 2.99 0.00 36.30 3.85
342 343 2.125106 GGCATCCTCGTGGTGGAC 60.125 66.667 2.99 0.00 36.30 4.02
343 344 2.606213 TGGCATCCTCGTGGTGGA 60.606 61.111 2.99 0.00 38.06 4.02
344 345 2.436646 GTGGCATCCTCGTGGTGG 60.437 66.667 2.99 0.00 34.23 4.61
345 346 2.436646 GGTGGCATCCTCGTGGTG 60.437 66.667 2.99 2.91 34.23 4.17
346 347 4.082523 CGGTGGCATCCTCGTGGT 62.083 66.667 2.99 0.00 34.23 4.16
347 348 4.082523 ACGGTGGCATCCTCGTGG 62.083 66.667 0.00 0.00 34.37 4.94
348 349 2.509336 GACGGTGGCATCCTCGTG 60.509 66.667 11.49 0.00 35.31 4.35
349 350 4.129737 CGACGGTGGCATCCTCGT 62.130 66.667 10.43 8.95 37.00 4.18
350 351 3.822192 TCGACGGTGGCATCCTCG 61.822 66.667 12.12 12.12 33.16 4.63
351 352 2.202756 GTCGACGGTGGCATCCTC 60.203 66.667 0.00 0.00 0.00 3.71
352 353 2.359169 ATGTCGACGGTGGCATCCT 61.359 57.895 11.62 0.00 0.00 3.24
353 354 2.173669 CATGTCGACGGTGGCATCC 61.174 63.158 11.62 0.00 0.00 3.51
354 355 2.813179 GCATGTCGACGGTGGCATC 61.813 63.158 18.64 0.00 0.00 3.91
355 356 2.819595 GCATGTCGACGGTGGCAT 60.820 61.111 18.64 1.07 0.00 4.40
358 359 2.125147 ATGGCATGTCGACGGTGG 60.125 61.111 18.64 6.97 0.00 4.61
359 360 2.173669 GGATGGCATGTCGACGGTG 61.174 63.158 3.81 13.24 0.00 4.94
360 361 1.899437 AAGGATGGCATGTCGACGGT 61.899 55.000 3.81 0.00 0.00 4.83
361 362 0.104120 TAAGGATGGCATGTCGACGG 59.896 55.000 3.81 6.88 0.00 4.79
362 363 1.202417 AGTAAGGATGGCATGTCGACG 60.202 52.381 3.81 0.00 0.00 5.12
363 364 2.604046 AGTAAGGATGGCATGTCGAC 57.396 50.000 9.11 9.11 0.00 4.20
364 365 2.499693 TCAAGTAAGGATGGCATGTCGA 59.500 45.455 3.81 0.00 0.00 4.20
365 366 2.905075 TCAAGTAAGGATGGCATGTCG 58.095 47.619 3.81 0.00 0.00 4.35
366 367 4.009675 TGTTCAAGTAAGGATGGCATGTC 58.990 43.478 3.81 0.00 0.00 3.06
367 368 3.758554 GTGTTCAAGTAAGGATGGCATGT 59.241 43.478 3.81 0.00 0.00 3.21
368 369 3.758023 TGTGTTCAAGTAAGGATGGCATG 59.242 43.478 3.81 0.00 0.00 4.06
369 370 3.758554 GTGTGTTCAAGTAAGGATGGCAT 59.241 43.478 0.00 0.00 0.00 4.40
370 371 3.146066 GTGTGTTCAAGTAAGGATGGCA 58.854 45.455 0.00 0.00 0.00 4.92
371 372 3.189287 CAGTGTGTTCAAGTAAGGATGGC 59.811 47.826 0.00 0.00 0.00 4.40
372 373 3.753272 CCAGTGTGTTCAAGTAAGGATGG 59.247 47.826 0.00 0.00 0.00 3.51
373 374 4.389374 ACCAGTGTGTTCAAGTAAGGATG 58.611 43.478 0.00 0.00 0.00 3.51
374 375 4.706842 ACCAGTGTGTTCAAGTAAGGAT 57.293 40.909 0.00 0.00 0.00 3.24
375 376 4.497291 AACCAGTGTGTTCAAGTAAGGA 57.503 40.909 0.00 0.00 0.00 3.36
376 377 4.036380 GGAAACCAGTGTGTTCAAGTAAGG 59.964 45.833 5.64 0.00 0.00 2.69
377 378 4.638421 TGGAAACCAGTGTGTTCAAGTAAG 59.362 41.667 5.64 0.00 0.00 2.34
378 379 4.590918 TGGAAACCAGTGTGTTCAAGTAA 58.409 39.130 5.64 0.00 0.00 2.24
379 380 4.223556 TGGAAACCAGTGTGTTCAAGTA 57.776 40.909 5.64 0.00 0.00 2.24
380 381 3.080300 TGGAAACCAGTGTGTTCAAGT 57.920 42.857 5.64 0.00 0.00 3.16
381 382 4.448537 TTTGGAAACCAGTGTGTTCAAG 57.551 40.909 5.64 0.00 33.81 3.02
382 383 4.464244 TGATTTGGAAACCAGTGTGTTCAA 59.536 37.500 5.64 1.80 33.81 2.69
383 384 4.019858 TGATTTGGAAACCAGTGTGTTCA 58.980 39.130 5.64 0.00 33.81 3.18
384 385 4.647424 TGATTTGGAAACCAGTGTGTTC 57.353 40.909 0.00 0.00 33.81 3.18
385 386 5.046663 AGTTTGATTTGGAAACCAGTGTGTT 60.047 36.000 0.00 0.00 34.42 3.32
386 387 4.466015 AGTTTGATTTGGAAACCAGTGTGT 59.534 37.500 0.00 0.00 34.42 3.72
387 388 5.009854 AGTTTGATTTGGAAACCAGTGTG 57.990 39.130 0.00 0.00 34.42 3.82
388 389 4.099419 GGAGTTTGATTTGGAAACCAGTGT 59.901 41.667 0.00 0.00 34.42 3.55
389 390 4.099266 TGGAGTTTGATTTGGAAACCAGTG 59.901 41.667 0.00 0.00 34.42 3.66
390 391 4.285863 TGGAGTTTGATTTGGAAACCAGT 58.714 39.130 0.00 0.00 34.42 4.00
391 392 4.935352 TGGAGTTTGATTTGGAAACCAG 57.065 40.909 0.00 0.00 34.42 4.00
392 393 4.467795 TGTTGGAGTTTGATTTGGAAACCA 59.532 37.500 0.00 0.00 34.42 3.67
393 394 4.808895 GTGTTGGAGTTTGATTTGGAAACC 59.191 41.667 0.00 0.00 34.42 3.27
394 395 4.502645 CGTGTTGGAGTTTGATTTGGAAAC 59.497 41.667 0.00 0.00 34.15 2.78
395 396 4.440802 CCGTGTTGGAGTTTGATTTGGAAA 60.441 41.667 0.00 0.00 42.00 3.13
396 397 3.067461 CCGTGTTGGAGTTTGATTTGGAA 59.933 43.478 0.00 0.00 42.00 3.53
397 398 2.621055 CCGTGTTGGAGTTTGATTTGGA 59.379 45.455 0.00 0.00 42.00 3.53
398 399 2.621055 TCCGTGTTGGAGTTTGATTTGG 59.379 45.455 0.00 0.00 43.74 3.28
399 400 3.980646 TCCGTGTTGGAGTTTGATTTG 57.019 42.857 0.00 0.00 43.74 2.32
410 411 1.153369 ATGAGGCGATCCGTGTTGG 60.153 57.895 0.00 0.00 37.47 3.77
411 412 1.482621 CGATGAGGCGATCCGTGTTG 61.483 60.000 0.00 0.00 37.47 3.33
412 413 1.226974 CGATGAGGCGATCCGTGTT 60.227 57.895 0.00 0.00 37.47 3.32
413 414 2.413351 CGATGAGGCGATCCGTGT 59.587 61.111 0.00 0.00 37.47 4.49
414 415 2.355126 CCGATGAGGCGATCCGTG 60.355 66.667 0.00 0.00 37.47 4.94
415 416 3.606662 CCCGATGAGGCGATCCGT 61.607 66.667 0.00 0.00 39.21 4.69
416 417 4.363990 CCCCGATGAGGCGATCCG 62.364 72.222 0.00 0.00 39.21 4.18
417 418 2.441822 CTTCCCCGATGAGGCGATCC 62.442 65.000 0.00 0.00 39.21 3.36
418 419 1.005630 CTTCCCCGATGAGGCGATC 60.006 63.158 0.00 0.00 39.21 3.69
419 420 2.511452 CCTTCCCCGATGAGGCGAT 61.511 63.158 0.00 0.00 39.21 4.58
420 421 3.154473 CCTTCCCCGATGAGGCGA 61.154 66.667 0.00 0.00 39.21 5.54
421 422 4.241555 CCCTTCCCCGATGAGGCG 62.242 72.222 0.00 0.00 39.21 5.52
422 423 3.090532 ACCCTTCCCCGATGAGGC 61.091 66.667 0.00 0.00 39.21 4.70
423 424 1.383248 AGACCCTTCCCCGATGAGG 60.383 63.158 0.00 0.00 40.63 3.86
424 425 1.690219 CCAGACCCTTCCCCGATGAG 61.690 65.000 0.00 0.00 0.00 2.90
425 426 1.689233 CCAGACCCTTCCCCGATGA 60.689 63.158 0.00 0.00 0.00 2.92
426 427 1.056700 ATCCAGACCCTTCCCCGATG 61.057 60.000 0.00 0.00 0.00 3.84
427 428 0.566176 TATCCAGACCCTTCCCCGAT 59.434 55.000 0.00 0.00 0.00 4.18
428 429 0.566176 ATATCCAGACCCTTCCCCGA 59.434 55.000 0.00 0.00 0.00 5.14
429 430 1.348036 GAATATCCAGACCCTTCCCCG 59.652 57.143 0.00 0.00 0.00 5.73
430 431 2.707554 AGAATATCCAGACCCTTCCCC 58.292 52.381 0.00 0.00 0.00 4.81
431 432 4.797912 AAAGAATATCCAGACCCTTCCC 57.202 45.455 0.00 0.00 0.00 3.97
432 433 6.651225 CGAATAAAGAATATCCAGACCCTTCC 59.349 42.308 0.00 0.00 0.00 3.46
433 434 6.651225 CCGAATAAAGAATATCCAGACCCTTC 59.349 42.308 0.00 0.00 0.00 3.46
434 435 6.534634 CCGAATAAAGAATATCCAGACCCTT 58.465 40.000 0.00 0.00 0.00 3.95
435 436 5.513267 GCCGAATAAAGAATATCCAGACCCT 60.513 44.000 0.00 0.00 0.00 4.34
436 437 4.695928 GCCGAATAAAGAATATCCAGACCC 59.304 45.833 0.00 0.00 0.00 4.46
437 438 4.389077 CGCCGAATAAAGAATATCCAGACC 59.611 45.833 0.00 0.00 0.00 3.85
438 439 4.989168 ACGCCGAATAAAGAATATCCAGAC 59.011 41.667 0.00 0.00 0.00 3.51
439 440 5.209818 ACGCCGAATAAAGAATATCCAGA 57.790 39.130 0.00 0.00 0.00 3.86
440 441 4.090066 CGACGCCGAATAAAGAATATCCAG 59.910 45.833 0.00 0.00 38.22 3.86
441 442 3.985279 CGACGCCGAATAAAGAATATCCA 59.015 43.478 0.00 0.00 38.22 3.41
442 443 3.367025 CCGACGCCGAATAAAGAATATCC 59.633 47.826 0.00 0.00 38.22 2.59
443 444 3.181533 GCCGACGCCGAATAAAGAATATC 60.182 47.826 0.00 0.00 38.22 1.63
444 445 2.735134 GCCGACGCCGAATAAAGAATAT 59.265 45.455 0.00 0.00 38.22 1.28
445 446 2.129607 GCCGACGCCGAATAAAGAATA 58.870 47.619 0.00 0.00 38.22 1.75
446 447 0.935196 GCCGACGCCGAATAAAGAAT 59.065 50.000 0.00 0.00 38.22 2.40
447 448 0.390078 TGCCGACGCCGAATAAAGAA 60.390 50.000 0.00 0.00 38.22 2.52
448 449 0.179094 ATGCCGACGCCGAATAAAGA 60.179 50.000 0.00 0.00 38.22 2.52
449 450 0.232303 GATGCCGACGCCGAATAAAG 59.768 55.000 0.00 0.00 38.22 1.85
450 451 1.484227 CGATGCCGACGCCGAATAAA 61.484 55.000 0.00 0.00 38.22 1.40
451 452 1.947146 CGATGCCGACGCCGAATAA 60.947 57.895 0.00 0.00 38.22 1.40
452 453 2.354188 CGATGCCGACGCCGAATA 60.354 61.111 0.00 0.00 38.22 1.75
453 454 2.616786 TAACGATGCCGACGCCGAAT 62.617 55.000 0.00 0.00 39.50 3.34
454 455 2.616786 ATAACGATGCCGACGCCGAA 62.617 55.000 0.00 0.00 39.50 4.30
455 456 2.994143 GATAACGATGCCGACGCCGA 62.994 60.000 0.00 0.00 39.50 5.54
456 457 2.645510 GATAACGATGCCGACGCCG 61.646 63.158 0.00 0.00 39.50 6.46
457 458 2.645510 CGATAACGATGCCGACGCC 61.646 63.158 0.00 0.00 42.66 5.68
458 459 2.837280 CGATAACGATGCCGACGC 59.163 61.111 0.00 0.00 42.66 5.19
459 460 2.645510 GGCGATAACGATGCCGACG 61.646 63.158 0.00 0.00 42.66 5.12
460 461 3.231501 GGCGATAACGATGCCGAC 58.768 61.111 0.00 0.00 42.66 4.79
463 464 1.853319 CTTCGGCGATAACGATGCC 59.147 57.895 11.76 0.00 45.39 4.40
468 469 2.593582 CGTTTTAGCTTCGGCGATAACG 60.594 50.000 11.76 15.20 46.34 3.18
475 476 2.158841 TGTTCATCGTTTTAGCTTCGGC 59.841 45.455 0.00 0.00 42.17 5.54
476 477 4.148891 GTTGTTCATCGTTTTAGCTTCGG 58.851 43.478 0.00 0.00 0.00 4.30
477 478 4.084013 AGGTTGTTCATCGTTTTAGCTTCG 60.084 41.667 0.00 0.00 0.00 3.79
478 479 5.358298 AGGTTGTTCATCGTTTTAGCTTC 57.642 39.130 0.00 0.00 0.00 3.86
479 480 6.870971 TTAGGTTGTTCATCGTTTTAGCTT 57.129 33.333 0.00 0.00 0.00 3.74
480 481 6.870971 TTTAGGTTGTTCATCGTTTTAGCT 57.129 33.333 0.00 0.00 0.00 3.32
481 482 7.432838 TGTTTTTAGGTTGTTCATCGTTTTAGC 59.567 33.333 0.00 0.00 0.00 3.09
482 483 8.844441 TGTTTTTAGGTTGTTCATCGTTTTAG 57.156 30.769 0.00 0.00 0.00 1.85
484 485 9.974980 ATATGTTTTTAGGTTGTTCATCGTTTT 57.025 25.926 0.00 0.00 0.00 2.43
488 489 9.221775 GCTTATATGTTTTTAGGTTGTTCATCG 57.778 33.333 0.00 0.00 0.00 3.84
492 493 9.999009 GGTAGCTTATATGTTTTTAGGTTGTTC 57.001 33.333 0.00 0.00 0.00 3.18
493 494 9.523168 TGGTAGCTTATATGTTTTTAGGTTGTT 57.477 29.630 0.00 0.00 0.00 2.83
494 495 9.523168 TTGGTAGCTTATATGTTTTTAGGTTGT 57.477 29.630 0.00 0.00 0.00 3.32
509 510 9.350951 GGATTGTTTTAGGTATTGGTAGCTTAT 57.649 33.333 0.00 0.00 39.30 1.73
510 511 8.330247 TGGATTGTTTTAGGTATTGGTAGCTTA 58.670 33.333 0.00 0.00 39.30 3.09
511 512 7.122204 GTGGATTGTTTTAGGTATTGGTAGCTT 59.878 37.037 0.00 0.00 39.30 3.74
512 513 6.602009 GTGGATTGTTTTAGGTATTGGTAGCT 59.398 38.462 0.00 0.00 41.32 3.32
513 514 6.602009 AGTGGATTGTTTTAGGTATTGGTAGC 59.398 38.462 0.00 0.00 0.00 3.58
514 515 8.575649 AAGTGGATTGTTTTAGGTATTGGTAG 57.424 34.615 0.00 0.00 0.00 3.18
515 516 8.164733 TGAAGTGGATTGTTTTAGGTATTGGTA 58.835 33.333 0.00 0.00 0.00 3.25
516 517 7.007723 TGAAGTGGATTGTTTTAGGTATTGGT 58.992 34.615 0.00 0.00 0.00 3.67
517 518 7.461182 TGAAGTGGATTGTTTTAGGTATTGG 57.539 36.000 0.00 0.00 0.00 3.16
518 519 8.576442 AGTTGAAGTGGATTGTTTTAGGTATTG 58.424 33.333 0.00 0.00 0.00 1.90
519 520 8.706322 AGTTGAAGTGGATTGTTTTAGGTATT 57.294 30.769 0.00 0.00 0.00 1.89
520 521 9.802039 TTAGTTGAAGTGGATTGTTTTAGGTAT 57.198 29.630 0.00 0.00 0.00 2.73
521 522 9.629878 TTTAGTTGAAGTGGATTGTTTTAGGTA 57.370 29.630 0.00 0.00 0.00 3.08
522 523 8.528044 TTTAGTTGAAGTGGATTGTTTTAGGT 57.472 30.769 0.00 0.00 0.00 3.08
523 524 7.595130 GCTTTAGTTGAAGTGGATTGTTTTAGG 59.405 37.037 0.00 0.00 0.00 2.69
524 525 7.595130 GGCTTTAGTTGAAGTGGATTGTTTTAG 59.405 37.037 0.00 0.00 0.00 1.85
525 526 7.430441 GGCTTTAGTTGAAGTGGATTGTTTTA 58.570 34.615 0.00 0.00 0.00 1.52
526 527 6.280643 GGCTTTAGTTGAAGTGGATTGTTTT 58.719 36.000 0.00 0.00 0.00 2.43
527 528 5.507315 CGGCTTTAGTTGAAGTGGATTGTTT 60.507 40.000 0.00 0.00 0.00 2.83
528 529 4.023193 CGGCTTTAGTTGAAGTGGATTGTT 60.023 41.667 0.00 0.00 0.00 2.83
529 530 3.502211 CGGCTTTAGTTGAAGTGGATTGT 59.498 43.478 0.00 0.00 0.00 2.71
530 531 3.502211 ACGGCTTTAGTTGAAGTGGATTG 59.498 43.478 0.00 0.00 0.00 2.67
531 532 3.751518 ACGGCTTTAGTTGAAGTGGATT 58.248 40.909 0.00 0.00 0.00 3.01
532 533 3.335579 GACGGCTTTAGTTGAAGTGGAT 58.664 45.455 0.00 0.00 0.00 3.41
533 534 2.762745 GACGGCTTTAGTTGAAGTGGA 58.237 47.619 0.00 0.00 0.00 4.02
534 535 1.459592 CGACGGCTTTAGTTGAAGTGG 59.540 52.381 0.00 0.00 0.00 4.00
535 536 1.459592 CCGACGGCTTTAGTTGAAGTG 59.540 52.381 0.00 0.00 0.00 3.16
536 537 1.792006 CCGACGGCTTTAGTTGAAGT 58.208 50.000 0.00 0.00 0.00 3.01
537 538 0.442699 GCCGACGGCTTTAGTTGAAG 59.557 55.000 31.30 0.00 46.69 3.02
538 539 2.535588 GCCGACGGCTTTAGTTGAA 58.464 52.632 31.30 0.00 46.69 2.69
539 540 4.272100 GCCGACGGCTTTAGTTGA 57.728 55.556 31.30 0.00 46.69 3.18
571 572 3.372554 CTTCCTTCCGCCGTCCTCC 62.373 68.421 0.00 0.00 0.00 4.30
598 609 2.109799 CGATCTTGCCTCCGCCAT 59.890 61.111 0.00 0.00 0.00 4.40
608 619 2.615912 GGATGGAAGAAAGGCGATCTTG 59.384 50.000 11.68 0.00 37.26 3.02
609 620 2.743183 CGGATGGAAGAAAGGCGATCTT 60.743 50.000 7.42 7.42 39.76 2.40
672 683 2.112297 AAAAACCGGGAGCGAGCA 59.888 55.556 6.32 0.00 0.00 4.26
686 697 3.486383 AGCTCAAGTTGATCGGGAAAAA 58.514 40.909 5.91 0.00 0.00 1.94
754 767 8.832521 CGAATAAGTACCTTAATACCATGCAAA 58.167 33.333 0.00 0.00 29.35 3.68
755 768 7.442969 CCGAATAAGTACCTTAATACCATGCAA 59.557 37.037 0.00 0.00 29.35 4.08
756 769 6.932400 CCGAATAAGTACCTTAATACCATGCA 59.068 38.462 0.00 0.00 29.35 3.96
757 770 6.932960 ACCGAATAAGTACCTTAATACCATGC 59.067 38.462 0.00 0.00 29.35 4.06
758 771 9.415544 GTACCGAATAAGTACCTTAATACCATG 57.584 37.037 0.00 0.00 35.15 3.66
759 772 8.299570 CGTACCGAATAAGTACCTTAATACCAT 58.700 37.037 0.00 0.00 37.41 3.55
760 773 7.500892 TCGTACCGAATAAGTACCTTAATACCA 59.499 37.037 0.00 0.00 37.41 3.25
761 774 7.871853 TCGTACCGAATAAGTACCTTAATACC 58.128 38.462 0.00 0.00 37.41 2.73
777 790 4.458989 ACACCAGTTATAGTTCGTACCGAA 59.541 41.667 0.00 0.00 43.75 4.30
789 802 5.252547 TGAGTACACGGTACACCAGTTATA 58.747 41.667 14.11 0.00 35.14 0.98
808 821 7.119262 CCGTTTTGAAAATACTCCTACATGAGT 59.881 37.037 0.00 0.00 46.90 3.41
809 822 7.333423 TCCGTTTTGAAAATACTCCTACATGAG 59.667 37.037 0.00 0.00 38.37 2.90
810 823 7.162761 TCCGTTTTGAAAATACTCCTACATGA 58.837 34.615 0.00 0.00 0.00 3.07
826 839 2.055838 CGACGACAGAATCCGTTTTGA 58.944 47.619 0.00 0.00 39.30 2.69
827 840 1.790623 ACGACGACAGAATCCGTTTTG 59.209 47.619 0.00 0.00 39.30 2.44
828 841 2.144482 ACGACGACAGAATCCGTTTT 57.856 45.000 0.00 0.00 39.30 2.43
829 842 1.790623 CAACGACGACAGAATCCGTTT 59.209 47.619 0.00 0.00 40.81 3.60
830 843 1.269413 ACAACGACGACAGAATCCGTT 60.269 47.619 0.00 0.00 43.08 4.44
831 844 0.313043 ACAACGACGACAGAATCCGT 59.687 50.000 0.00 0.00 42.17 4.69
832 845 0.982673 GACAACGACGACAGAATCCG 59.017 55.000 0.00 0.00 0.00 4.18
833 846 2.349297 AGACAACGACGACAGAATCC 57.651 50.000 0.00 0.00 0.00 3.01
834 847 4.080969 AGTAGACAACGACGACAGAATC 57.919 45.455 0.00 0.00 0.00 2.52
835 848 4.227538 CAAGTAGACAACGACGACAGAAT 58.772 43.478 0.00 0.00 0.00 2.40
876 895 0.933097 GGAGTAGACGTGCATGCATG 59.067 55.000 33.18 33.18 38.78 4.06
877 896 0.179073 GGGAGTAGACGTGCATGCAT 60.179 55.000 25.64 8.94 0.00 3.96
878 897 1.218047 GGGAGTAGACGTGCATGCA 59.782 57.895 18.46 18.46 0.00 3.96
879 898 1.878522 CGGGAGTAGACGTGCATGC 60.879 63.158 11.82 11.82 0.00 4.06
914 933 1.612463 GGAGATTTCCATGCATCTGCC 59.388 52.381 0.00 3.99 43.45 4.85
917 936 7.753630 ACTATTAAGGAGATTTCCATGCATCT 58.246 34.615 4.89 0.00 46.64 2.90
952 972 1.361793 GCGTTGGTGTTTCGGCTATA 58.638 50.000 0.00 0.00 0.00 1.31
953 973 1.303091 GGCGTTGGTGTTTCGGCTAT 61.303 55.000 0.00 0.00 44.45 2.97
988 1008 2.237143 AGTTTTCCATGGCAGAGATCGA 59.763 45.455 6.96 0.00 0.00 3.59
989 1009 2.636830 AGTTTTCCATGGCAGAGATCG 58.363 47.619 6.96 0.00 0.00 3.69
990 1010 4.629251 GAAGTTTTCCATGGCAGAGATC 57.371 45.455 6.96 0.00 0.00 2.75
1030 1050 1.123077 TCGATGTTCTCCATGGAGGG 58.877 55.000 35.95 17.45 42.20 4.30
1050 1070 1.734047 CGCTTCTTGAACGAGGAGAGG 60.734 57.143 1.79 0.00 0.00 3.69
1260 1280 3.479269 GTGAGCACGCGCCTGTAC 61.479 66.667 5.73 0.90 39.83 2.90
1567 1587 3.645975 CTTCGCGCGGTGGTGTTT 61.646 61.111 31.69 0.00 0.00 2.83
1578 1598 3.326210 GCATCCTCGAGCTTCGCG 61.326 66.667 6.99 0.00 40.21 5.87
1640 1666 4.643387 ACGGCAGCTGGTGTTCCC 62.643 66.667 17.12 5.75 0.00 3.97
1648 1674 4.063967 TACCCGTGACGGCAGCTG 62.064 66.667 20.39 10.11 46.86 4.24
1659 1685 1.628846 AGAGAAATTGCTGGTACCCGT 59.371 47.619 10.07 0.00 0.00 5.28
1665 1695 2.973945 GGTACGAGAGAAATTGCTGGT 58.026 47.619 0.00 0.00 0.00 4.00
1681 1711 1.387756 CGGAATCAAACACGACGGTAC 59.612 52.381 0.00 0.00 0.00 3.34
1684 1714 1.323534 GATCGGAATCAAACACGACGG 59.676 52.381 0.00 0.00 38.24 4.79
1685 1715 2.259618 AGATCGGAATCAAACACGACG 58.740 47.619 0.00 0.00 38.24 5.12
1686 1716 5.282510 AGATAGATCGGAATCAAACACGAC 58.717 41.667 0.00 0.00 38.24 4.34
1704 1750 9.270640 AGACTGCAGAAAATTAGCAATAGATAG 57.729 33.333 23.35 0.00 37.89 2.08
1705 1751 9.265901 GAGACTGCAGAAAATTAGCAATAGATA 57.734 33.333 23.35 0.00 37.89 1.98
1707 1753 6.540189 GGAGACTGCAGAAAATTAGCAATAGA 59.460 38.462 23.35 0.00 37.89 1.98
1709 1755 6.179756 TGGAGACTGCAGAAAATTAGCAATA 58.820 36.000 23.35 0.00 37.89 1.90
1712 1758 4.019792 TGGAGACTGCAGAAAATTAGCA 57.980 40.909 23.35 0.00 36.72 3.49
1717 1763 4.564782 TCAGATGGAGACTGCAGAAAAT 57.435 40.909 23.35 6.29 35.61 1.82
1729 1775 6.770746 AAGGAAACAATCAATCAGATGGAG 57.229 37.500 0.00 0.00 36.96 3.86
1732 1778 6.395629 AGCAAAGGAAACAATCAATCAGATG 58.604 36.000 0.00 0.00 36.96 2.90
1780 1829 3.954740 AACCGGGCCATGGTCCCTA 62.955 63.158 29.84 0.00 41.69 3.53
1893 1942 0.861837 CACGAGGAGACAAACAGCAC 59.138 55.000 0.00 0.00 0.00 4.40
1972 2021 3.931768 AGCCAAGACTCTTGCTCAG 57.068 52.632 12.69 1.57 0.00 3.35
1982 2031 1.149148 GGAAGTTGTCGAGCCAAGAC 58.851 55.000 0.00 0.00 38.98 3.01
2066 2115 3.615155 GGATTCTTGGAACTCTTGGAGG 58.385 50.000 0.00 0.00 33.35 4.30
2138 2193 4.763279 GGGAGGAACGAAAATTTACAGGAA 59.237 41.667 0.00 0.00 0.00 3.36
2157 2212 0.895530 TGTGCTAGGAACGAAGGGAG 59.104 55.000 0.00 0.00 0.00 4.30
2170 2225 2.011947 GATGCATGCTGAGTTGTGCTA 58.988 47.619 20.33 0.00 38.37 3.49
2221 2281 7.917003 AGTTGCCCTAAATCAAAATTGGTAAT 58.083 30.769 0.00 0.00 0.00 1.89
2296 2356 2.885894 GACTTATCCACCTAGACGGAGG 59.114 54.545 6.31 0.00 44.25 4.30
2297 2357 3.552875 TGACTTATCCACCTAGACGGAG 58.447 50.000 6.31 0.00 33.97 4.63
2298 2358 3.657398 TGACTTATCCACCTAGACGGA 57.343 47.619 2.92 2.92 36.31 4.69
2299 2359 4.556898 CGAATGACTTATCCACCTAGACGG 60.557 50.000 0.00 0.00 39.35 4.79
2300 2360 4.537965 CGAATGACTTATCCACCTAGACG 58.462 47.826 0.00 0.00 0.00 4.18
2301 2361 4.202121 TGCGAATGACTTATCCACCTAGAC 60.202 45.833 0.00 0.00 0.00 2.59
2302 2362 3.958147 TGCGAATGACTTATCCACCTAGA 59.042 43.478 0.00 0.00 0.00 2.43
2303 2363 4.322080 TGCGAATGACTTATCCACCTAG 57.678 45.455 0.00 0.00 0.00 3.02
2304 2364 4.955811 ATGCGAATGACTTATCCACCTA 57.044 40.909 0.00 0.00 0.00 3.08
2305 2365 3.845781 ATGCGAATGACTTATCCACCT 57.154 42.857 0.00 0.00 0.00 4.00
2306 2366 4.632153 ACTATGCGAATGACTTATCCACC 58.368 43.478 0.00 0.00 0.00 4.61
2307 2367 5.986135 AGAACTATGCGAATGACTTATCCAC 59.014 40.000 0.00 0.00 0.00 4.02
2308 2368 6.161855 AGAACTATGCGAATGACTTATCCA 57.838 37.500 0.00 0.00 0.00 3.41
2309 2369 6.809196 CCTAGAACTATGCGAATGACTTATCC 59.191 42.308 0.00 0.00 0.00 2.59
2310 2370 7.371936 ACCTAGAACTATGCGAATGACTTATC 58.628 38.462 0.00 0.00 0.00 1.75
2311 2371 7.291411 ACCTAGAACTATGCGAATGACTTAT 57.709 36.000 0.00 0.00 0.00 1.73
2312 2372 6.512903 CGACCTAGAACTATGCGAATGACTTA 60.513 42.308 0.00 0.00 0.00 2.24
2313 2373 5.593010 GACCTAGAACTATGCGAATGACTT 58.407 41.667 0.00 0.00 0.00 3.01
2314 2374 4.261238 CGACCTAGAACTATGCGAATGACT 60.261 45.833 0.00 0.00 0.00 3.41
2315 2375 3.975670 CGACCTAGAACTATGCGAATGAC 59.024 47.826 0.00 0.00 0.00 3.06
2316 2376 3.881089 TCGACCTAGAACTATGCGAATGA 59.119 43.478 0.00 0.00 0.00 2.57
2317 2377 3.975670 GTCGACCTAGAACTATGCGAATG 59.024 47.826 3.51 0.00 0.00 2.67
2318 2378 3.630769 TGTCGACCTAGAACTATGCGAAT 59.369 43.478 14.12 0.00 0.00 3.34
2319 2379 3.011818 TGTCGACCTAGAACTATGCGAA 58.988 45.455 14.12 0.00 0.00 4.70
2320 2380 2.635714 TGTCGACCTAGAACTATGCGA 58.364 47.619 14.12 0.00 0.00 5.10
2321 2381 3.416119 TTGTCGACCTAGAACTATGCG 57.584 47.619 14.12 0.00 0.00 4.73
2322 2382 7.491696 AGTTAAATTGTCGACCTAGAACTATGC 59.508 37.037 14.12 0.00 0.00 3.14
2323 2383 8.928270 AGTTAAATTGTCGACCTAGAACTATG 57.072 34.615 14.12 0.00 0.00 2.23
2326 2386 8.968969 AGATAGTTAAATTGTCGACCTAGAACT 58.031 33.333 14.12 16.69 0.00 3.01
2393 2453 8.135529 TATCACAAGATTTCTACACGGATGTAG 58.864 37.037 7.95 7.95 45.22 2.74
2394 2454 6.275494 TCACAAGATTTCTACACGGATGTA 57.725 37.500 0.00 0.00 40.48 2.29
2395 2455 5.147330 TCACAAGATTTCTACACGGATGT 57.853 39.130 0.00 0.00 43.30 3.06
2396 2456 7.953158 ATATCACAAGATTTCTACACGGATG 57.047 36.000 0.00 0.00 35.67 3.51
2397 2457 8.861086 AGTATATCACAAGATTTCTACACGGAT 58.139 33.333 0.00 0.00 35.67 4.18
2398 2458 8.234136 AGTATATCACAAGATTTCTACACGGA 57.766 34.615 0.00 0.00 35.67 4.69
2399 2459 8.873215 AAGTATATCACAAGATTTCTACACGG 57.127 34.615 0.00 0.00 35.67 4.94
2441 2501 9.831737 GGTCATCGATTTGAGGAATTAAATATG 57.168 33.333 0.00 0.00 39.46 1.78
2442 2502 9.799106 AGGTCATCGATTTGAGGAATTAAATAT 57.201 29.630 0.00 0.00 39.46 1.28
2444 2504 9.277783 CTAGGTCATCGATTTGAGGAATTAAAT 57.722 33.333 0.00 0.00 39.46 1.40
2445 2505 8.482943 TCTAGGTCATCGATTTGAGGAATTAAA 58.517 33.333 0.00 0.00 39.46 1.52
2446 2506 8.018537 TCTAGGTCATCGATTTGAGGAATTAA 57.981 34.615 0.00 0.00 39.46 1.40
2447 2507 7.597288 TCTAGGTCATCGATTTGAGGAATTA 57.403 36.000 0.00 0.00 39.46 1.40
2448 2508 6.485830 TCTAGGTCATCGATTTGAGGAATT 57.514 37.500 0.00 0.00 39.46 2.17
2449 2509 6.098982 AGTTCTAGGTCATCGATTTGAGGAAT 59.901 38.462 0.00 0.00 39.46 3.01
2450 2510 5.422331 AGTTCTAGGTCATCGATTTGAGGAA 59.578 40.000 0.00 0.00 39.46 3.36
2451 2511 4.956700 AGTTCTAGGTCATCGATTTGAGGA 59.043 41.667 0.00 0.00 34.44 3.71
2452 2512 5.269505 AGTTCTAGGTCATCGATTTGAGG 57.730 43.478 0.00 0.00 0.00 3.86
2453 2513 5.910166 CGTAGTTCTAGGTCATCGATTTGAG 59.090 44.000 0.00 0.00 0.00 3.02
2454 2514 5.732528 GCGTAGTTCTAGGTCATCGATTTGA 60.733 44.000 0.00 0.00 0.00 2.69
2455 2515 4.441415 GCGTAGTTCTAGGTCATCGATTTG 59.559 45.833 0.00 0.00 0.00 2.32
2456 2516 4.608951 GCGTAGTTCTAGGTCATCGATTT 58.391 43.478 0.00 0.00 0.00 2.17
2457 2517 3.303857 CGCGTAGTTCTAGGTCATCGATT 60.304 47.826 0.00 0.00 0.00 3.34
2458 2518 2.223611 CGCGTAGTTCTAGGTCATCGAT 59.776 50.000 0.00 0.00 0.00 3.59
2459 2519 1.596260 CGCGTAGTTCTAGGTCATCGA 59.404 52.381 0.00 0.00 0.00 3.59
2460 2520 1.596260 TCGCGTAGTTCTAGGTCATCG 59.404 52.381 5.77 0.00 0.00 3.84
2461 2521 3.687572 TTCGCGTAGTTCTAGGTCATC 57.312 47.619 5.77 0.00 0.00 2.92
2462 2522 3.630769 TCATTCGCGTAGTTCTAGGTCAT 59.369 43.478 5.77 0.00 0.00 3.06
2463 2523 3.011818 TCATTCGCGTAGTTCTAGGTCA 58.988 45.455 5.77 0.00 0.00 4.02
2464 2524 3.065095 AGTCATTCGCGTAGTTCTAGGTC 59.935 47.826 5.77 0.00 0.00 3.85
2465 2525 3.015327 AGTCATTCGCGTAGTTCTAGGT 58.985 45.455 5.77 0.00 0.00 3.08
2466 2526 3.694535 AGTCATTCGCGTAGTTCTAGG 57.305 47.619 5.77 0.00 0.00 3.02
2467 2527 7.310361 GAATAAGTCATTCGCGTAGTTCTAG 57.690 40.000 5.77 0.00 34.04 2.43
2479 2539 3.430218 CCATCTCGGCGAATAAGTCATTC 59.570 47.826 12.13 0.00 39.84 2.67
2480 2540 3.069586 TCCATCTCGGCGAATAAGTCATT 59.930 43.478 12.13 0.00 33.14 2.57
2481 2541 2.628178 TCCATCTCGGCGAATAAGTCAT 59.372 45.455 12.13 0.00 33.14 3.06
2482 2542 2.028876 TCCATCTCGGCGAATAAGTCA 58.971 47.619 12.13 0.00 33.14 3.41
2483 2543 2.608261 CCTCCATCTCGGCGAATAAGTC 60.608 54.545 12.13 0.00 33.14 3.01
2484 2544 1.341531 CCTCCATCTCGGCGAATAAGT 59.658 52.381 12.13 0.00 33.14 2.24
2485 2545 1.341531 ACCTCCATCTCGGCGAATAAG 59.658 52.381 12.13 0.00 33.14 1.73
2486 2546 1.410004 ACCTCCATCTCGGCGAATAA 58.590 50.000 12.13 0.00 33.14 1.40
2487 2547 2.160205 CTACCTCCATCTCGGCGAATA 58.840 52.381 12.13 1.96 33.14 1.75
2488 2548 0.962489 CTACCTCCATCTCGGCGAAT 59.038 55.000 12.13 4.88 33.14 3.34
2489 2549 0.395311 ACTACCTCCATCTCGGCGAA 60.395 55.000 12.13 2.34 33.14 4.70
2490 2550 0.471191 TACTACCTCCATCTCGGCGA 59.529 55.000 10.14 10.14 33.14 5.54
2491 2551 0.875728 CTACTACCTCCATCTCGGCG 59.124 60.000 0.00 0.00 33.14 6.46
2492 2552 1.984066 ACTACTACCTCCATCTCGGC 58.016 55.000 0.00 0.00 33.14 5.54
2493 2553 7.941431 AAATATACTACTACCTCCATCTCGG 57.059 40.000 0.00 0.00 0.00 4.63
2567 2627 2.666812 GTACCCCACCTTCCCGTG 59.333 66.667 0.00 0.00 0.00 4.94
2573 2633 2.278330 GGTCGACGTACCCCACCTT 61.278 63.158 9.92 0.00 33.02 3.50
2585 2646 5.693104 TCGCATATATAGTTTTTGGGTCGAC 59.307 40.000 7.13 7.13 0.00 4.20
2592 2653 6.500684 AGGCCATCGCATATATAGTTTTTG 57.499 37.500 5.01 0.00 36.38 2.44
2597 2658 4.467795 AGACAAGGCCATCGCATATATAGT 59.532 41.667 5.01 0.00 36.38 2.12
2598 2659 5.016051 AGACAAGGCCATCGCATATATAG 57.984 43.478 5.01 0.00 36.38 1.31
2599 2660 4.141937 GGAGACAAGGCCATCGCATATATA 60.142 45.833 5.01 0.00 36.38 0.86
2600 2661 3.369892 GGAGACAAGGCCATCGCATATAT 60.370 47.826 5.01 0.00 36.38 0.86
2601 2662 2.028112 GGAGACAAGGCCATCGCATATA 60.028 50.000 5.01 0.00 36.38 0.86
2602 2663 1.271054 GGAGACAAGGCCATCGCATAT 60.271 52.381 5.01 0.00 36.38 1.78
2607 2668 1.144936 GGAGGAGACAAGGCCATCG 59.855 63.158 5.01 0.00 0.00 3.84
2629 2690 4.225042 TGAGCCAACCATTATAGAGTGTGT 59.775 41.667 0.00 0.00 0.00 3.72
2638 2699 4.858850 TCAGTGAATGAGCCAACCATTAT 58.141 39.130 0.00 0.00 34.67 1.28
2639 2700 4.299586 TCAGTGAATGAGCCAACCATTA 57.700 40.909 0.00 0.00 34.67 1.90
2640 2701 3.159213 TCAGTGAATGAGCCAACCATT 57.841 42.857 0.00 0.00 36.98 3.16
2641 2702 2.885135 TCAGTGAATGAGCCAACCAT 57.115 45.000 0.00 0.00 32.77 3.55
2643 2704 3.496130 CGATATCAGTGAATGAGCCAACC 59.504 47.826 3.12 0.00 42.53 3.77
2645 2706 4.141959 TGTCGATATCAGTGAATGAGCCAA 60.142 41.667 3.12 0.00 42.53 4.52
2648 2709 5.464722 ACAATGTCGATATCAGTGAATGAGC 59.535 40.000 8.67 0.00 42.53 4.26
2651 2712 9.201127 AGAATACAATGTCGATATCAGTGAATG 57.799 33.333 8.67 0.00 35.35 2.67
2652 2713 9.770097 AAGAATACAATGTCGATATCAGTGAAT 57.230 29.630 8.67 0.00 35.35 2.57
2656 2717 9.046296 GGAAAAGAATACAATGTCGATATCAGT 57.954 33.333 3.12 0.51 0.00 3.41
2657 2718 8.217115 CGGAAAAGAATACAATGTCGATATCAG 58.783 37.037 3.12 0.00 0.00 2.90
2660 2721 6.346598 CGCGGAAAAGAATACAATGTCGATAT 60.347 38.462 0.00 0.00 0.00 1.63
2661 2722 5.051307 CGCGGAAAAGAATACAATGTCGATA 60.051 40.000 0.00 0.00 0.00 2.92
2720 2781 2.048127 GATATCCACGGAGCCGCC 60.048 66.667 9.14 0.00 44.19 6.13
2722 2783 0.319900 CCAAGATATCCACGGAGCCG 60.320 60.000 7.48 7.48 46.03 5.52
2726 2787 2.380941 TCGAACCAAGATATCCACGGA 58.619 47.619 9.12 0.00 0.00 4.69
2730 2791 5.419542 CAGAACTTCGAACCAAGATATCCA 58.580 41.667 0.00 0.00 0.00 3.41
2768 2829 4.669197 CGACCTTAAATCAAACCTTGAGCG 60.669 45.833 0.00 0.00 43.98 5.03
2846 2907 3.461773 ATGGGCTCTCGACCGGTG 61.462 66.667 14.63 4.45 43.41 4.94
2851 2912 4.554036 GGGGCATGGGCTCTCGAC 62.554 72.222 0.00 0.00 41.58 4.20
2872 2933 3.851979 TCATCATCAATACCCCGACCTA 58.148 45.455 0.00 0.00 0.00 3.08
2941 3003 8.611757 TCCGATAACAATGTGTTCTCATTATTG 58.388 33.333 0.00 0.00 40.22 1.90
2966 3028 7.120873 GGGGTTTAACTATGGACTTTTCTCTTC 59.879 40.741 0.00 0.00 0.00 2.87
2969 3031 5.353400 CGGGGTTTAACTATGGACTTTTCTC 59.647 44.000 0.00 0.00 0.00 2.87
3029 3091 2.031683 GGATGCAATAAGACCGGTTTCG 59.968 50.000 9.42 0.00 0.00 3.46
3040 3102 4.018870 TGTGGTAAGTGGAGGATGCAATAA 60.019 41.667 0.00 0.00 39.09 1.40
3084 3146 2.156098 TGACCAGCCCAAAAACGATAC 58.844 47.619 0.00 0.00 0.00 2.24
3092 3154 2.203422 CCGGTTGACCAGCCCAAA 60.203 61.111 0.00 0.00 35.14 3.28



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.