Multiple sequence alignment - TraesCS2B01G488700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G488700 chr2B 100.000 3443 0 0 1 3443 686048368 686051810 0.000000e+00 6359
1 TraesCS2B01G488700 chr2B 74.474 2092 427 81 528 2536 686813448 686815515 0.000000e+00 806
2 TraesCS2B01G488700 chr2B 78.128 1111 165 46 1622 2685 686458151 686459230 4.850000e-178 634
3 TraesCS2B01G488700 chr2B 78.378 851 170 13 600 1441 685815439 685816284 1.090000e-149 540
4 TraesCS2B01G488700 chr2B 75.717 1116 211 44 600 1686 685744796 685745880 3.970000e-139 505
5 TraesCS2B01G488700 chr2B 80.477 671 104 19 1736 2394 685270194 685270849 3.990000e-134 488
6 TraesCS2B01G488700 chr2B 79.623 584 93 18 1786 2359 685816680 685817247 2.490000e-106 396
7 TraesCS2B01G488700 chr2B 84.257 343 48 5 2055 2394 685746225 685746564 2.560000e-86 329
8 TraesCS2B01G488700 chr2B 86.250 160 17 5 1786 1942 685746034 685746191 5.910000e-38 169
9 TraesCS2B01G488700 chr2B 79.355 155 27 4 258 410 686813133 686813284 1.690000e-18 104
10 TraesCS2B01G488700 chr6A 95.902 732 30 0 2712 3443 549051384 549052115 0.000000e+00 1186
11 TraesCS2B01G488700 chr2A 76.741 1982 372 54 603 2509 711061588 711063555 0.000000e+00 1024
12 TraesCS2B01G488700 chr2A 83.768 998 134 16 1734 2712 711049704 711050692 0.000000e+00 920
13 TraesCS2B01G488700 chr2A 88.171 727 86 0 2716 3442 707997929 707998655 0.000000e+00 867
14 TraesCS2B01G488700 chr2A 80.913 1095 186 15 1529 2609 710759344 710760429 0.000000e+00 843
15 TraesCS2B01G488700 chr2A 80.906 618 85 16 1786 2394 710803972 710804565 1.130000e-124 457
16 TraesCS2B01G488700 chr4A 88.996 727 80 0 2716 3442 17396761 17397487 0.000000e+00 900
17 TraesCS2B01G488700 chr4D 88.308 727 85 0 2716 3442 498966170 498966896 0.000000e+00 872
18 TraesCS2B01G488700 chr1D 88.308 727 85 0 2716 3442 482920457 482919731 0.000000e+00 872
19 TraesCS2B01G488700 chr3D 88.308 727 83 2 2716 3442 20900924 20901648 0.000000e+00 870
20 TraesCS2B01G488700 chr7A 88.171 727 86 0 2716 3442 26772049 26771323 0.000000e+00 867
21 TraesCS2B01G488700 chr3A 88.171 727 86 0 2716 3442 455798572 455799298 0.000000e+00 867
22 TraesCS2B01G488700 chr1B 87.895 727 87 1 2716 3442 605973135 605973860 0.000000e+00 854
23 TraesCS2B01G488700 chr2D 79.412 816 125 29 1734 2525 572035292 572036088 1.410000e-148 536


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G488700 chr2B 686048368 686051810 3442 False 6359.000000 6359 100.000000 1 3443 1 chr2B.!!$F2 3442
1 TraesCS2B01G488700 chr2B 686458151 686459230 1079 False 634.000000 634 78.128000 1622 2685 1 chr2B.!!$F3 1063
2 TraesCS2B01G488700 chr2B 685270194 685270849 655 False 488.000000 488 80.477000 1736 2394 1 chr2B.!!$F1 658
3 TraesCS2B01G488700 chr2B 685815439 685817247 1808 False 468.000000 540 79.000500 600 2359 2 chr2B.!!$F5 1759
4 TraesCS2B01G488700 chr2B 686813133 686815515 2382 False 455.000000 806 76.914500 258 2536 2 chr2B.!!$F6 2278
5 TraesCS2B01G488700 chr2B 685744796 685746564 1768 False 334.333333 505 82.074667 600 2394 3 chr2B.!!$F4 1794
6 TraesCS2B01G488700 chr6A 549051384 549052115 731 False 1186.000000 1186 95.902000 2712 3443 1 chr6A.!!$F1 731
7 TraesCS2B01G488700 chr2A 711061588 711063555 1967 False 1024.000000 1024 76.741000 603 2509 1 chr2A.!!$F5 1906
8 TraesCS2B01G488700 chr2A 711049704 711050692 988 False 920.000000 920 83.768000 1734 2712 1 chr2A.!!$F4 978
9 TraesCS2B01G488700 chr2A 707997929 707998655 726 False 867.000000 867 88.171000 2716 3442 1 chr2A.!!$F1 726
10 TraesCS2B01G488700 chr2A 710759344 710760429 1085 False 843.000000 843 80.913000 1529 2609 1 chr2A.!!$F2 1080
11 TraesCS2B01G488700 chr2A 710803972 710804565 593 False 457.000000 457 80.906000 1786 2394 1 chr2A.!!$F3 608
12 TraesCS2B01G488700 chr4A 17396761 17397487 726 False 900.000000 900 88.996000 2716 3442 1 chr4A.!!$F1 726
13 TraesCS2B01G488700 chr4D 498966170 498966896 726 False 872.000000 872 88.308000 2716 3442 1 chr4D.!!$F1 726
14 TraesCS2B01G488700 chr1D 482919731 482920457 726 True 872.000000 872 88.308000 2716 3442 1 chr1D.!!$R1 726
15 TraesCS2B01G488700 chr3D 20900924 20901648 724 False 870.000000 870 88.308000 2716 3442 1 chr3D.!!$F1 726
16 TraesCS2B01G488700 chr7A 26771323 26772049 726 True 867.000000 867 88.171000 2716 3442 1 chr7A.!!$R1 726
17 TraesCS2B01G488700 chr3A 455798572 455799298 726 False 867.000000 867 88.171000 2716 3442 1 chr3A.!!$F1 726
18 TraesCS2B01G488700 chr1B 605973135 605973860 725 False 854.000000 854 87.895000 2716 3442 1 chr1B.!!$F1 726
19 TraesCS2B01G488700 chr2D 572035292 572036088 796 False 536.000000 536 79.412000 1734 2525 1 chr2D.!!$F1 791

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
174 175 0.119155 TTGAGGAGGTGGATGGGTCT 59.881 55.0 0.0 0.0 0.00 3.85 F
518 543 0.179000 GATTCTCCTGCGGACATGGT 59.821 55.0 0.0 0.0 0.00 3.55 F
2182 2369 0.036577 AGATGAGCAAGAGCAAGCGT 60.037 50.0 0.0 0.0 45.49 5.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1944 2114 0.178967 TGCCAAGGAATTGCAGACCA 60.179 50.0 0.0 0.0 0.0 4.02 R
2292 2479 0.044092 TTGAGATGCCCCTAGACCCA 59.956 55.0 0.0 0.0 0.0 4.51 R
3048 3275 1.071605 GCGATGAATGGATAGCGGAC 58.928 55.0 0.0 0.0 0.0 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 6.919775 AGTTAGTGAACTGAGGACATTAGT 57.080 37.500 0.00 0.00 44.50 2.24
36 37 6.692486 AGTTAGTGAACTGAGGACATTAGTG 58.308 40.000 0.00 0.00 44.50 2.74
37 38 6.267928 AGTTAGTGAACTGAGGACATTAGTGT 59.732 38.462 0.00 0.00 44.50 3.55
38 39 5.552870 AGTGAACTGAGGACATTAGTGTT 57.447 39.130 0.00 0.00 39.09 3.32
39 40 6.665992 AGTGAACTGAGGACATTAGTGTTA 57.334 37.500 0.00 0.00 39.09 2.41
40 41 6.456501 AGTGAACTGAGGACATTAGTGTTAC 58.543 40.000 0.00 0.00 39.09 2.50
41 42 6.267928 AGTGAACTGAGGACATTAGTGTTACT 59.732 38.462 0.00 0.00 39.09 2.24
42 43 6.929606 GTGAACTGAGGACATTAGTGTTACTT 59.070 38.462 0.00 0.00 39.09 2.24
43 44 6.929049 TGAACTGAGGACATTAGTGTTACTTG 59.071 38.462 0.00 0.00 39.09 3.16
44 45 5.794894 ACTGAGGACATTAGTGTTACTTGG 58.205 41.667 0.00 0.00 39.09 3.61
45 46 5.160607 TGAGGACATTAGTGTTACTTGGG 57.839 43.478 0.00 0.00 39.09 4.12
46 47 3.939592 GAGGACATTAGTGTTACTTGGGC 59.060 47.826 0.00 0.00 39.09 5.36
47 48 3.329520 AGGACATTAGTGTTACTTGGGCA 59.670 43.478 0.00 0.00 39.09 5.36
48 49 3.439129 GGACATTAGTGTTACTTGGGCAC 59.561 47.826 0.00 0.00 39.09 5.01
49 50 4.324267 GACATTAGTGTTACTTGGGCACT 58.676 43.478 0.00 0.00 44.49 4.40
50 51 5.484715 GACATTAGTGTTACTTGGGCACTA 58.515 41.667 0.00 0.00 42.60 2.74
51 52 6.062258 ACATTAGTGTTACTTGGGCACTAT 57.938 37.500 4.76 0.00 42.83 2.12
52 53 5.880332 ACATTAGTGTTACTTGGGCACTATG 59.120 40.000 4.76 7.65 42.83 2.23
53 54 5.748670 TTAGTGTTACTTGGGCACTATGA 57.251 39.130 4.76 0.00 42.83 2.15
54 55 3.939066 AGTGTTACTTGGGCACTATGAC 58.061 45.455 0.00 0.00 41.12 3.06
55 56 3.583086 AGTGTTACTTGGGCACTATGACT 59.417 43.478 0.00 0.00 41.12 3.41
56 57 4.041691 AGTGTTACTTGGGCACTATGACTT 59.958 41.667 0.00 0.00 41.12 3.01
57 58 4.760204 GTGTTACTTGGGCACTATGACTTT 59.240 41.667 0.00 0.00 0.00 2.66
58 59 5.240844 GTGTTACTTGGGCACTATGACTTTT 59.759 40.000 0.00 0.00 0.00 2.27
59 60 5.472137 TGTTACTTGGGCACTATGACTTTTC 59.528 40.000 0.00 0.00 0.00 2.29
60 61 3.421844 ACTTGGGCACTATGACTTTTCC 58.578 45.455 0.00 0.00 0.00 3.13
61 62 3.074538 ACTTGGGCACTATGACTTTTCCT 59.925 43.478 0.00 0.00 0.00 3.36
62 63 3.806949 TGGGCACTATGACTTTTCCTT 57.193 42.857 0.00 0.00 0.00 3.36
63 64 3.686016 TGGGCACTATGACTTTTCCTTC 58.314 45.455 0.00 0.00 0.00 3.46
64 65 3.330701 TGGGCACTATGACTTTTCCTTCT 59.669 43.478 0.00 0.00 0.00 2.85
65 66 4.202567 TGGGCACTATGACTTTTCCTTCTT 60.203 41.667 0.00 0.00 0.00 2.52
66 67 5.013704 TGGGCACTATGACTTTTCCTTCTTA 59.986 40.000 0.00 0.00 0.00 2.10
67 68 5.354513 GGGCACTATGACTTTTCCTTCTTAC 59.645 44.000 0.00 0.00 0.00 2.34
68 69 6.174049 GGCACTATGACTTTTCCTTCTTACT 58.826 40.000 0.00 0.00 0.00 2.24
69 70 7.328737 GGCACTATGACTTTTCCTTCTTACTA 58.671 38.462 0.00 0.00 0.00 1.82
70 71 7.988028 GGCACTATGACTTTTCCTTCTTACTAT 59.012 37.037 0.00 0.00 0.00 2.12
71 72 9.384764 GCACTATGACTTTTCCTTCTTACTATT 57.615 33.333 0.00 0.00 0.00 1.73
98 99 8.774546 TTCCAATATATATTCCAAAAGGCACA 57.225 30.769 4.93 0.00 0.00 4.57
99 100 8.954834 TCCAATATATATTCCAAAAGGCACAT 57.045 30.769 4.93 0.00 0.00 3.21
107 108 5.365403 TTCCAAAAGGCACATAACTTACG 57.635 39.130 0.00 0.00 0.00 3.18
108 109 4.391155 TCCAAAAGGCACATAACTTACGT 58.609 39.130 0.00 0.00 0.00 3.57
109 110 4.214545 TCCAAAAGGCACATAACTTACGTG 59.785 41.667 0.00 0.00 0.00 4.49
110 111 4.023536 CCAAAAGGCACATAACTTACGTGT 60.024 41.667 0.00 0.00 33.13 4.49
111 112 4.742438 AAAGGCACATAACTTACGTGTG 57.258 40.909 0.00 0.00 44.51 3.82
117 118 5.832568 CACATAACTTACGTGTGCTACAA 57.167 39.130 0.00 0.00 37.09 2.41
118 119 6.218025 CACATAACTTACGTGTGCTACAAA 57.782 37.500 0.00 0.00 37.09 2.83
119 120 6.827641 CACATAACTTACGTGTGCTACAAAT 58.172 36.000 0.00 0.00 37.09 2.32
120 121 6.736405 CACATAACTTACGTGTGCTACAAATG 59.264 38.462 0.00 0.00 37.09 2.32
121 122 6.425721 ACATAACTTACGTGTGCTACAAATGT 59.574 34.615 0.00 0.00 0.00 2.71
122 123 4.985044 ACTTACGTGTGCTACAAATGTC 57.015 40.909 0.00 0.00 0.00 3.06
123 124 4.628074 ACTTACGTGTGCTACAAATGTCT 58.372 39.130 0.00 0.00 0.00 3.41
124 125 4.447724 ACTTACGTGTGCTACAAATGTCTG 59.552 41.667 0.00 0.00 0.00 3.51
125 126 1.531149 ACGTGTGCTACAAATGTCTGC 59.469 47.619 0.00 0.00 0.00 4.26
126 127 1.530720 CGTGTGCTACAAATGTCTGCA 59.469 47.619 9.18 9.18 36.05 4.41
127 128 2.411935 CGTGTGCTACAAATGTCTGCAG 60.412 50.000 7.63 7.63 37.95 4.41
128 129 1.536766 TGTGCTACAAATGTCTGCAGC 59.463 47.619 9.47 4.92 37.95 5.25
129 130 1.536766 GTGCTACAAATGTCTGCAGCA 59.463 47.619 9.47 11.14 37.95 4.41
130 131 2.163010 GTGCTACAAATGTCTGCAGCAT 59.837 45.455 9.47 13.06 37.95 3.79
131 132 2.421073 TGCTACAAATGTCTGCAGCATC 59.579 45.455 19.43 9.47 32.76 3.91
132 133 2.681848 GCTACAAATGTCTGCAGCATCT 59.318 45.455 19.43 7.43 0.00 2.90
133 134 3.487042 GCTACAAATGTCTGCAGCATCTG 60.487 47.826 19.43 18.40 34.12 2.90
149 150 4.801891 GCATCTGCTGATTTTCTCAAACA 58.198 39.130 2.92 0.00 38.21 2.83
150 151 5.408356 GCATCTGCTGATTTTCTCAAACAT 58.592 37.500 2.92 0.00 38.21 2.71
151 152 5.288712 GCATCTGCTGATTTTCTCAAACATG 59.711 40.000 2.92 0.00 38.21 3.21
152 153 5.381174 TCTGCTGATTTTCTCAAACATGG 57.619 39.130 0.00 0.00 32.14 3.66
153 154 4.219070 TCTGCTGATTTTCTCAAACATGGG 59.781 41.667 0.00 0.00 32.14 4.00
154 155 4.151121 TGCTGATTTTCTCAAACATGGGA 58.849 39.130 0.00 0.00 32.14 4.37
155 156 4.773674 TGCTGATTTTCTCAAACATGGGAT 59.226 37.500 0.00 0.00 32.14 3.85
156 157 5.246656 TGCTGATTTTCTCAAACATGGGATT 59.753 36.000 0.00 0.00 32.14 3.01
157 158 5.579511 GCTGATTTTCTCAAACATGGGATTG 59.420 40.000 0.00 0.00 32.14 2.67
158 159 6.572898 GCTGATTTTCTCAAACATGGGATTGA 60.573 38.462 0.00 4.27 34.98 2.57
163 164 3.285484 CTCAAACATGGGATTGAGGAGG 58.715 50.000 21.29 5.86 45.22 4.30
164 165 2.649312 TCAAACATGGGATTGAGGAGGT 59.351 45.455 0.00 0.00 31.72 3.85
165 166 2.756760 CAAACATGGGATTGAGGAGGTG 59.243 50.000 0.00 0.00 0.00 4.00
166 167 0.921896 ACATGGGATTGAGGAGGTGG 59.078 55.000 0.00 0.00 0.00 4.61
167 168 1.216064 CATGGGATTGAGGAGGTGGA 58.784 55.000 0.00 0.00 0.00 4.02
168 169 1.779092 CATGGGATTGAGGAGGTGGAT 59.221 52.381 0.00 0.00 0.00 3.41
169 170 1.216064 TGGGATTGAGGAGGTGGATG 58.784 55.000 0.00 0.00 0.00 3.51
170 171 0.475906 GGGATTGAGGAGGTGGATGG 59.524 60.000 0.00 0.00 0.00 3.51
171 172 0.475906 GGATTGAGGAGGTGGATGGG 59.524 60.000 0.00 0.00 0.00 4.00
172 173 1.216990 GATTGAGGAGGTGGATGGGT 58.783 55.000 0.00 0.00 0.00 4.51
173 174 1.141858 GATTGAGGAGGTGGATGGGTC 59.858 57.143 0.00 0.00 0.00 4.46
174 175 0.119155 TTGAGGAGGTGGATGGGTCT 59.881 55.000 0.00 0.00 0.00 3.85
175 176 0.119155 TGAGGAGGTGGATGGGTCTT 59.881 55.000 0.00 0.00 0.00 3.01
176 177 1.290134 GAGGAGGTGGATGGGTCTTT 58.710 55.000 0.00 0.00 0.00 2.52
177 178 1.210722 GAGGAGGTGGATGGGTCTTTC 59.789 57.143 0.00 0.00 0.00 2.62
178 179 0.256177 GGAGGTGGATGGGTCTTTCC 59.744 60.000 0.00 0.00 0.00 3.13
205 206 8.309163 TCAAATTTTGAGCAAATTGTACCATC 57.691 30.769 7.74 0.00 43.20 3.51
206 207 8.149647 TCAAATTTTGAGCAAATTGTACCATCT 58.850 29.630 7.74 0.00 43.20 2.90
207 208 8.437742 CAAATTTTGAGCAAATTGTACCATCTC 58.562 33.333 2.88 0.00 43.20 2.75
208 209 5.643379 TTTGAGCAAATTGTACCATCTCC 57.357 39.130 0.00 0.00 0.00 3.71
209 210 4.299586 TGAGCAAATTGTACCATCTCCA 57.700 40.909 0.00 0.00 0.00 3.86
210 211 4.661222 TGAGCAAATTGTACCATCTCCAA 58.339 39.130 0.00 0.00 0.00 3.53
211 212 4.701651 TGAGCAAATTGTACCATCTCCAAG 59.298 41.667 0.00 0.00 0.00 3.61
212 213 4.666512 AGCAAATTGTACCATCTCCAAGT 58.333 39.130 0.00 0.00 0.00 3.16
213 214 5.815581 AGCAAATTGTACCATCTCCAAGTA 58.184 37.500 0.00 0.00 0.00 2.24
214 215 6.426587 AGCAAATTGTACCATCTCCAAGTAT 58.573 36.000 0.00 0.00 0.00 2.12
215 216 6.891908 AGCAAATTGTACCATCTCCAAGTATT 59.108 34.615 0.00 0.00 0.00 1.89
216 217 8.052748 AGCAAATTGTACCATCTCCAAGTATTA 58.947 33.333 0.00 0.00 0.00 0.98
217 218 8.345565 GCAAATTGTACCATCTCCAAGTATTAG 58.654 37.037 0.00 0.00 0.00 1.73
218 219 9.396022 CAAATTGTACCATCTCCAAGTATTAGT 57.604 33.333 0.00 0.00 0.00 2.24
219 220 9.614792 AAATTGTACCATCTCCAAGTATTAGTC 57.385 33.333 0.00 0.00 0.00 2.59
220 221 6.387041 TGTACCATCTCCAAGTATTAGTCG 57.613 41.667 0.00 0.00 0.00 4.18
221 222 4.939052 ACCATCTCCAAGTATTAGTCGG 57.061 45.455 0.00 0.00 0.00 4.79
222 223 4.287552 ACCATCTCCAAGTATTAGTCGGT 58.712 43.478 0.00 0.00 0.00 4.69
223 224 4.715297 ACCATCTCCAAGTATTAGTCGGTT 59.285 41.667 0.00 0.00 0.00 4.44
224 225 5.163437 ACCATCTCCAAGTATTAGTCGGTTC 60.163 44.000 0.00 0.00 0.00 3.62
225 226 5.163447 CCATCTCCAAGTATTAGTCGGTTCA 60.163 44.000 0.00 0.00 0.00 3.18
226 227 6.463049 CCATCTCCAAGTATTAGTCGGTTCAT 60.463 42.308 0.00 0.00 0.00 2.57
227 228 7.255836 CCATCTCCAAGTATTAGTCGGTTCATA 60.256 40.741 0.00 0.00 0.00 2.15
228 229 7.035840 TCTCCAAGTATTAGTCGGTTCATAC 57.964 40.000 0.00 0.00 0.00 2.39
229 230 6.604396 TCTCCAAGTATTAGTCGGTTCATACA 59.396 38.462 0.00 0.00 0.00 2.29
230 231 7.123098 TCTCCAAGTATTAGTCGGTTCATACAA 59.877 37.037 0.00 0.00 0.00 2.41
231 232 7.788026 TCCAAGTATTAGTCGGTTCATACAAT 58.212 34.615 0.00 0.00 0.00 2.71
232 233 7.709182 TCCAAGTATTAGTCGGTTCATACAATG 59.291 37.037 0.00 0.00 0.00 2.82
233 234 7.709182 CCAAGTATTAGTCGGTTCATACAATGA 59.291 37.037 0.00 0.00 37.55 2.57
234 235 9.261180 CAAGTATTAGTCGGTTCATACAATGAT 57.739 33.333 0.00 0.00 39.39 2.45
235 236 9.477484 AAGTATTAGTCGGTTCATACAATGATC 57.523 33.333 0.00 0.00 39.39 2.92
236 237 7.808381 AGTATTAGTCGGTTCATACAATGATCG 59.192 37.037 0.00 6.75 39.39 3.69
237 238 4.386867 AGTCGGTTCATACAATGATCGT 57.613 40.909 10.65 0.00 39.39 3.73
238 239 5.509716 AGTCGGTTCATACAATGATCGTA 57.490 39.130 10.65 0.00 39.39 3.43
239 240 5.279384 AGTCGGTTCATACAATGATCGTAC 58.721 41.667 10.65 0.00 39.39 3.67
240 241 5.067413 AGTCGGTTCATACAATGATCGTACT 59.933 40.000 10.65 10.01 39.39 2.73
241 242 6.261603 AGTCGGTTCATACAATGATCGTACTA 59.738 38.462 10.65 0.00 39.39 1.82
242 243 7.040617 AGTCGGTTCATACAATGATCGTACTAT 60.041 37.037 10.65 0.00 39.39 2.12
243 244 7.060748 GTCGGTTCATACAATGATCGTACTATG 59.939 40.741 10.65 0.00 39.39 2.23
244 245 6.183359 CGGTTCATACAATGATCGTACTATGC 60.183 42.308 6.80 0.00 39.39 3.14
245 246 6.090898 GGTTCATACAATGATCGTACTATGCC 59.909 42.308 6.80 2.19 39.39 4.40
246 247 6.590234 TCATACAATGATCGTACTATGCCT 57.410 37.500 6.80 0.00 33.59 4.75
247 248 6.389906 TCATACAATGATCGTACTATGCCTG 58.610 40.000 6.80 0.00 33.59 4.85
248 249 3.995199 ACAATGATCGTACTATGCCTGG 58.005 45.455 0.00 0.00 0.00 4.45
249 250 3.388024 ACAATGATCGTACTATGCCTGGT 59.612 43.478 0.00 0.00 0.00 4.00
250 251 4.141711 ACAATGATCGTACTATGCCTGGTT 60.142 41.667 0.00 0.00 0.00 3.67
251 252 3.452755 TGATCGTACTATGCCTGGTTG 57.547 47.619 0.00 0.00 0.00 3.77
252 253 2.764010 TGATCGTACTATGCCTGGTTGT 59.236 45.455 0.00 0.00 0.00 3.32
253 254 3.955551 TGATCGTACTATGCCTGGTTGTA 59.044 43.478 0.00 0.00 0.00 2.41
254 255 4.587262 TGATCGTACTATGCCTGGTTGTAT 59.413 41.667 0.00 0.00 0.00 2.29
255 256 5.069914 TGATCGTACTATGCCTGGTTGTATT 59.930 40.000 0.00 0.00 0.00 1.89
256 257 4.689071 TCGTACTATGCCTGGTTGTATTG 58.311 43.478 0.00 0.00 0.00 1.90
267 268 6.663093 TGCCTGGTTGTATTGATAATCTTGTT 59.337 34.615 0.00 0.00 0.00 2.83
276 277 3.466836 TGATAATCTTGTTAGCCTGCGG 58.533 45.455 0.00 0.00 0.00 5.69
287 288 3.672293 CCTGCGGCATCTTGTTGT 58.328 55.556 1.75 0.00 0.00 3.32
290 291 1.155889 CTGCGGCATCTTGTTGTACA 58.844 50.000 1.75 0.00 0.00 2.90
309 310 3.320673 CACAAGGGAGTGTACTCTTCC 57.679 52.381 13.59 13.59 42.48 3.46
315 316 2.027192 GGGAGTGTACTCTTCCATTGCA 60.027 50.000 16.10 0.00 42.48 4.08
317 318 3.437049 GGAGTGTACTCTTCCATTGCAAC 59.563 47.826 0.00 0.00 42.48 4.17
323 324 3.499338 ACTCTTCCATTGCAACCATTGA 58.501 40.909 0.00 0.00 0.00 2.57
324 325 4.091549 ACTCTTCCATTGCAACCATTGAT 58.908 39.130 0.00 0.00 0.00 2.57
326 327 5.716228 ACTCTTCCATTGCAACCATTGATAA 59.284 36.000 0.00 0.00 0.00 1.75
327 328 6.381994 ACTCTTCCATTGCAACCATTGATAAT 59.618 34.615 0.00 0.00 0.00 1.28
331 332 6.457355 TCCATTGCAACCATTGATAATATGC 58.543 36.000 0.00 0.00 0.00 3.14
332 333 6.268158 TCCATTGCAACCATTGATAATATGCT 59.732 34.615 0.00 0.00 33.66 3.79
336 337 7.999450 TGCAACCATTGATAATATGCTATCA 57.001 32.000 0.00 0.00 36.68 2.15
337 338 8.584063 TGCAACCATTGATAATATGCTATCAT 57.416 30.769 0.00 0.00 37.95 2.45
347 348 9.154847 TGATAATATGCTATCATTTCAGGAACG 57.845 33.333 0.00 0.00 34.15 3.95
353 354 4.024556 GCTATCATTTCAGGAACGACATGG 60.025 45.833 0.00 0.00 0.00 3.66
357 358 4.215399 TCATTTCAGGAACGACATGGTTTC 59.785 41.667 0.00 0.00 0.00 2.78
358 359 2.920724 TCAGGAACGACATGGTTTCA 57.079 45.000 0.00 0.00 0.00 2.69
361 362 2.878406 CAGGAACGACATGGTTTCAAGT 59.122 45.455 0.00 0.00 0.00 3.16
365 366 4.201970 GGAACGACATGGTTTCAAGTTTCA 60.202 41.667 0.00 0.00 0.00 2.69
366 367 5.507315 GGAACGACATGGTTTCAAGTTTCAT 60.507 40.000 0.00 0.00 0.00 2.57
368 369 6.817765 ACGACATGGTTTCAAGTTTCATAT 57.182 33.333 0.00 0.00 0.00 1.78
370 371 7.657336 ACGACATGGTTTCAAGTTTCATATTT 58.343 30.769 0.00 0.00 0.00 1.40
404 405 5.245531 TGAGATAACACAACTCCAATCCAC 58.754 41.667 0.00 0.00 0.00 4.02
405 406 5.013079 TGAGATAACACAACTCCAATCCACT 59.987 40.000 0.00 0.00 0.00 4.00
406 407 5.248640 AGATAACACAACTCCAATCCACTG 58.751 41.667 0.00 0.00 0.00 3.66
408 409 3.576078 ACACAACTCCAATCCACTGAA 57.424 42.857 0.00 0.00 0.00 3.02
409 410 3.214328 ACACAACTCCAATCCACTGAAC 58.786 45.455 0.00 0.00 0.00 3.18
411 412 3.822735 CACAACTCCAATCCACTGAACAT 59.177 43.478 0.00 0.00 0.00 2.71
412 413 4.279169 CACAACTCCAATCCACTGAACATT 59.721 41.667 0.00 0.00 0.00 2.71
413 414 4.279169 ACAACTCCAATCCACTGAACATTG 59.721 41.667 0.00 0.00 0.00 2.82
414 415 3.424703 ACTCCAATCCACTGAACATTGG 58.575 45.455 5.07 5.07 45.56 3.16
417 418 4.380841 CCAATCCACTGAACATTGGATG 57.619 45.455 21.40 16.13 46.26 3.51
426 451 6.334989 CACTGAACATTGGATGCATGTTAAT 58.665 36.000 2.46 0.00 43.47 1.40
431 456 7.557358 TGAACATTGGATGCATGTTAATACTCT 59.443 33.333 2.46 0.00 43.47 3.24
435 460 6.000246 TGGATGCATGTTAATACTCTGGAA 58.000 37.500 2.46 0.00 0.00 3.53
438 463 6.939163 GGATGCATGTTAATACTCTGGAAGAT 59.061 38.462 2.46 0.00 45.62 2.40
440 465 6.653020 TGCATGTTAATACTCTGGAAGATGT 58.347 36.000 0.00 0.00 45.62 3.06
456 481 4.148128 AGATGTTTATGAGGCAGGACTG 57.852 45.455 0.00 0.00 0.00 3.51
457 482 2.787473 TGTTTATGAGGCAGGACTGG 57.213 50.000 1.01 0.00 0.00 4.00
458 483 1.985159 TGTTTATGAGGCAGGACTGGT 59.015 47.619 1.01 0.00 0.00 4.00
465 490 2.375174 TGAGGCAGGACTGGTAAACAAT 59.625 45.455 1.01 0.00 0.00 2.71
470 495 3.821033 GCAGGACTGGTAAACAATGAACT 59.179 43.478 1.01 0.00 0.00 3.01
473 498 5.409826 CAGGACTGGTAAACAATGAACTCTC 59.590 44.000 0.00 0.00 0.00 3.20
478 503 7.054124 ACTGGTAAACAATGAACTCTCAGAAA 58.946 34.615 0.00 0.00 34.23 2.52
481 506 7.556275 TGGTAAACAATGAACTCTCAGAAAAGT 59.444 33.333 0.00 0.00 34.23 2.66
483 508 9.226345 GTAAACAATGAACTCTCAGAAAAGTTG 57.774 33.333 3.15 0.00 35.90 3.16
486 511 4.882671 TGAACTCTCAGAAAAGTTGCAC 57.117 40.909 3.15 0.00 35.90 4.57
516 541 2.997899 GGATTCTCCTGCGGACATG 58.002 57.895 0.00 0.00 32.53 3.21
518 543 0.179000 GATTCTCCTGCGGACATGGT 59.821 55.000 0.00 0.00 0.00 3.55
519 544 0.179000 ATTCTCCTGCGGACATGGTC 59.821 55.000 0.00 0.00 0.00 4.02
520 545 1.191489 TTCTCCTGCGGACATGGTCA 61.191 55.000 0.00 0.00 33.68 4.02
521 546 0.977627 TCTCCTGCGGACATGGTCAT 60.978 55.000 0.00 0.00 33.68 3.06
522 547 0.812811 CTCCTGCGGACATGGTCATG 60.813 60.000 9.19 9.19 44.15 3.07
523 548 1.820906 CCTGCGGACATGGTCATGG 60.821 63.158 14.49 0.00 42.91 3.66
524 549 1.221566 CTGCGGACATGGTCATGGA 59.778 57.895 14.49 0.00 42.91 3.41
525 550 0.812811 CTGCGGACATGGTCATGGAG 60.813 60.000 14.49 6.95 42.91 3.86
526 551 1.524621 GCGGACATGGTCATGGAGG 60.525 63.158 14.49 4.92 42.91 4.30
535 581 0.698818 GGTCATGGAGGTTGAGGGTT 59.301 55.000 0.00 0.00 0.00 4.11
536 582 1.614317 GGTCATGGAGGTTGAGGGTTG 60.614 57.143 0.00 0.00 0.00 3.77
537 583 0.698238 TCATGGAGGTTGAGGGTTGG 59.302 55.000 0.00 0.00 0.00 3.77
559 605 2.899303 ACCACATTGGGACTTAAGGG 57.101 50.000 7.53 0.00 43.37 3.95
560 606 2.070573 ACCACATTGGGACTTAAGGGT 58.929 47.619 7.53 0.00 43.37 4.34
564 610 4.010349 CACATTGGGACTTAAGGGTTCTC 58.990 47.826 7.53 0.00 0.00 2.87
565 611 3.270877 CATTGGGACTTAAGGGTTCTCG 58.729 50.000 7.53 0.00 0.00 4.04
567 613 2.176889 TGGGACTTAAGGGTTCTCGAG 58.823 52.381 5.93 5.93 0.00 4.04
574 620 6.294286 GGACTTAAGGGTTCTCGAGATATCTG 60.294 46.154 17.44 2.97 0.00 2.90
575 621 5.536916 ACTTAAGGGTTCTCGAGATATCTGG 59.463 44.000 17.44 9.41 0.00 3.86
583 629 7.124448 GGGTTCTCGAGATATCTGGGTATAATT 59.876 40.741 17.44 0.00 0.00 1.40
584 630 8.532819 GGTTCTCGAGATATCTGGGTATAATTT 58.467 37.037 17.44 0.00 0.00 1.82
586 632 9.929180 TTCTCGAGATATCTGGGTATAATTTTG 57.071 33.333 17.44 0.00 0.00 2.44
589 635 8.375506 TCGAGATATCTGGGTATAATTTTGCTT 58.624 33.333 10.74 0.00 0.00 3.91
590 636 8.446273 CGAGATATCTGGGTATAATTTTGCTTG 58.554 37.037 10.74 0.00 0.00 4.01
591 637 8.641498 AGATATCTGGGTATAATTTTGCTTGG 57.359 34.615 3.89 0.00 0.00 3.61
592 638 8.448008 AGATATCTGGGTATAATTTTGCTTGGA 58.552 33.333 3.89 0.00 0.00 3.53
595 641 6.013379 TCTGGGTATAATTTTGCTTGGACAA 58.987 36.000 0.00 0.00 0.00 3.18
596 642 6.667414 TCTGGGTATAATTTTGCTTGGACAAT 59.333 34.615 0.00 0.00 0.00 2.71
597 643 7.180051 TCTGGGTATAATTTTGCTTGGACAATT 59.820 33.333 0.00 0.00 0.00 2.32
599 645 8.986991 TGGGTATAATTTTGCTTGGACAATTAT 58.013 29.630 9.82 9.82 36.34 1.28
600 646 9.260002 GGGTATAATTTTGCTTGGACAATTATG 57.740 33.333 13.00 0.00 34.86 1.90
601 647 9.260002 GGTATAATTTTGCTTGGACAATTATGG 57.740 33.333 13.00 0.00 34.86 2.74
605 654 5.798125 TTTGCTTGGACAATTATGGTTGA 57.202 34.783 0.00 0.00 33.37 3.18
611 660 6.662865 TTGGACAATTATGGTTGACAACAT 57.337 33.333 19.58 12.91 33.37 2.71
629 678 6.415573 ACAACATTATCTTGGTTACCTCCTC 58.584 40.000 2.07 0.00 0.00 3.71
630 679 5.632034 ACATTATCTTGGTTACCTCCTCC 57.368 43.478 2.07 0.00 0.00 4.30
637 686 1.328430 GGTTACCTCCTCCCAGACGG 61.328 65.000 0.00 0.00 0.00 4.79
642 691 1.592223 CTCCTCCCAGACGGTTCAC 59.408 63.158 0.00 0.00 0.00 3.18
643 692 1.152419 TCCTCCCAGACGGTTCACA 60.152 57.895 0.00 0.00 0.00 3.58
647 696 2.483714 CCTCCCAGACGGTTCACATATG 60.484 54.545 0.00 0.00 0.00 1.78
654 703 1.330521 ACGGTTCACATATGCGATTGC 59.669 47.619 1.58 0.00 43.20 3.56
697 746 5.356426 CATCTTTGGAAAGGTTTCGGTTTT 58.644 37.500 0.00 0.00 38.06 2.43
709 758 2.861462 TCGGTTTTTGACAAAGCTGG 57.139 45.000 0.10 0.00 31.89 4.85
717 766 3.558931 TTGACAAAGCTGGAGTTGAGA 57.441 42.857 2.92 0.00 0.00 3.27
725 774 1.528129 CTGGAGTTGAGAAACCTGCC 58.472 55.000 0.00 0.00 0.00 4.85
736 785 7.606839 AGTTGAGAAACCTGCCTAAAGTAATAC 59.393 37.037 0.00 0.00 0.00 1.89
739 788 7.940137 TGAGAAACCTGCCTAAAGTAATACAAA 59.060 33.333 0.00 0.00 0.00 2.83
742 791 9.999009 GAAACCTGCCTAAAGTAATACAAATAC 57.001 33.333 0.00 0.00 0.00 1.89
767 816 0.463620 CCTTCACTGGAGGAGCTAGC 59.536 60.000 6.62 6.62 0.00 3.42
810 859 4.009675 TGGAGAAATGTACATGCACTTCC 58.990 43.478 9.63 12.39 0.00 3.46
831 880 3.215151 CGTGGAAGGTATGAGCTCTAGA 58.785 50.000 16.19 0.00 0.00 2.43
850 899 3.095332 AGACTAAGAGCACTGCAGATCA 58.905 45.455 23.35 0.00 0.00 2.92
894 943 6.038714 AGGAGTTTGATCTGTTTGAGAACAAC 59.961 38.462 0.00 0.00 44.65 3.32
923 972 1.207089 CGAAACTGGGCAGAGGTCATA 59.793 52.381 0.00 0.00 0.00 2.15
925 974 1.207791 AACTGGGCAGAGGTCATAGG 58.792 55.000 0.00 0.00 0.00 2.57
926 975 1.341156 ACTGGGCAGAGGTCATAGGC 61.341 60.000 0.00 0.00 0.00 3.93
927 976 1.003442 TGGGCAGAGGTCATAGGCT 59.997 57.895 0.00 0.00 0.00 4.58
940 989 4.083565 GTCATAGGCTCCTAGTCTTAGGG 58.916 52.174 0.00 0.00 45.60 3.53
943 992 3.035055 AGGCTCCTAGTCTTAGGGAAC 57.965 52.381 1.05 0.00 45.60 3.62
963 1012 2.239907 ACTAAGTCTGGAGAATTGCCCC 59.760 50.000 0.00 0.00 34.03 5.80
992 1041 0.868406 GTGTTGAAGCCTCTTCCACG 59.132 55.000 4.35 0.00 0.00 4.94
998 1047 0.321122 AAGCCTCTTCCACGCTCAAG 60.321 55.000 0.00 0.00 30.92 3.02
1001 1050 0.392193 CCTCTTCCACGCTCAAGCAT 60.392 55.000 2.50 0.00 42.21 3.79
1002 1051 0.725686 CTCTTCCACGCTCAAGCATG 59.274 55.000 2.50 0.00 42.21 4.06
1021 1070 5.046735 AGCATGTGTTCTGAGTTACTCATCT 60.047 40.000 15.91 0.30 39.92 2.90
1026 1075 5.631512 GTGTTCTGAGTTACTCATCTGTGAC 59.368 44.000 15.91 8.68 39.92 3.67
1044 1093 2.859538 TGACGTTTCAACACTTCCGTAC 59.140 45.455 0.00 0.00 0.00 3.67
1061 1113 3.321968 CCGTACATGAAGGGATCATCTGA 59.678 47.826 0.00 0.00 45.91 3.27
1066 1118 5.622180 ACATGAAGGGATCATCTGATGAAG 58.378 41.667 22.91 8.14 45.91 3.02
1081 1133 7.437713 TCTGATGAAGAGTTATGTATTGGGT 57.562 36.000 0.00 0.00 0.00 4.51
1085 1137 8.933653 TGATGAAGAGTTATGTATTGGGTATGA 58.066 33.333 0.00 0.00 0.00 2.15
1088 1140 8.156820 TGAAGAGTTATGTATTGGGTATGATGG 58.843 37.037 0.00 0.00 0.00 3.51
1099 1153 2.639839 GGGTATGATGGTGAGTATGGCT 59.360 50.000 0.00 0.00 0.00 4.75
1110 1165 4.335594 GGTGAGTATGGCTATGGTTTTGAC 59.664 45.833 0.00 0.00 0.00 3.18
1119 1177 4.201920 GGCTATGGTTTTGACGAATCTTCC 60.202 45.833 0.00 0.00 0.00 3.46
1130 1188 4.174009 GACGAATCTTCCGATGAGTTGAA 58.826 43.478 6.09 0.00 0.00 2.69
1153 1211 7.814107 TGAAGATACTGGATGACAAAATTTTGC 59.186 33.333 26.94 20.07 41.79 3.68
1167 1225 8.314143 ACAAAATTTTGCTGTTCCATAATCTG 57.686 30.769 26.94 2.37 41.79 2.90
1169 1227 8.991026 CAAAATTTTGCTGTTCCATAATCTGAA 58.009 29.630 17.48 0.00 0.00 3.02
1192 1250 6.436843 AAAACCTCAAATCGATGGTGATAC 57.563 37.500 11.36 0.00 32.53 2.24
1203 1261 0.393673 TGGTGATACATGGTTGCCGG 60.394 55.000 0.00 0.00 0.00 6.13
1212 1270 2.026262 ACATGGTTGCCGGAATCTAAGT 60.026 45.455 5.05 0.00 0.00 2.24
1215 1273 2.014857 GGTTGCCGGAATCTAAGTTCC 58.985 52.381 5.05 0.00 43.42 3.62
1216 1274 2.617021 GGTTGCCGGAATCTAAGTTCCA 60.617 50.000 5.05 0.00 46.47 3.53
1224 1282 6.262273 GCCGGAATCTAAGTTCCATTTCATTA 59.738 38.462 5.05 0.00 46.47 1.90
1294 1352 9.392021 GAAATTGTGAAAAACTTTTTGCTTCAA 57.608 25.926 4.17 4.33 0.00 2.69
1330 1388 3.448686 CATACCCTCGAAGATGTGACAC 58.551 50.000 0.00 0.00 33.89 3.67
1359 1417 1.340405 TGCAAGGCTTTCCCATCTCTC 60.340 52.381 0.00 0.00 35.39 3.20
1363 1421 2.122768 AGGCTTTCCCATCTCTCGAAT 58.877 47.619 0.00 0.00 35.39 3.34
1386 1444 6.053632 TGTCTCAGTATTGATTCATGTGGT 57.946 37.500 0.00 0.00 31.68 4.16
1391 1449 9.147732 TCTCAGTATTGATTCATGTGGTATAGT 57.852 33.333 0.00 0.00 31.68 2.12
1444 1502 1.475751 CGCCATGCCTAGAGGAATTGT 60.476 52.381 0.00 0.00 37.39 2.71
1445 1503 2.224281 CGCCATGCCTAGAGGAATTGTA 60.224 50.000 0.00 0.00 37.39 2.41
1450 1508 5.829924 CCATGCCTAGAGGAATTGTATTTGT 59.170 40.000 0.00 0.00 37.39 2.83
1451 1509 6.016777 CCATGCCTAGAGGAATTGTATTTGTC 60.017 42.308 0.00 0.00 37.39 3.18
1454 1512 6.823689 TGCCTAGAGGAATTGTATTTGTCTTC 59.176 38.462 0.00 0.00 37.39 2.87
1455 1513 6.261158 GCCTAGAGGAATTGTATTTGTCTTCC 59.739 42.308 0.00 0.00 37.39 3.46
1456 1514 6.768381 CCTAGAGGAATTGTATTTGTCTTCCC 59.232 42.308 0.00 0.00 36.80 3.97
1457 1515 6.139679 AGAGGAATTGTATTTGTCTTCCCA 57.860 37.500 0.00 0.00 36.80 4.37
1458 1516 6.552008 AGAGGAATTGTATTTGTCTTCCCAA 58.448 36.000 0.00 0.00 36.80 4.12
1461 1519 6.660949 AGGAATTGTATTTGTCTTCCCAAGAG 59.339 38.462 0.00 0.00 38.41 2.85
1462 1520 6.127619 GGAATTGTATTTGTCTTCCCAAGAGG 60.128 42.308 0.00 0.00 38.41 3.69
1492 1565 8.980481 AAAATCAGAAGAGGAAGAAAACAGTA 57.020 30.769 0.00 0.00 0.00 2.74
1520 1593 0.543749 CTTAGCTCAACCAGGGAGGG 59.456 60.000 0.00 0.00 43.89 4.30
1522 1595 2.763988 TAGCTCAACCAGGGAGGGCA 62.764 60.000 7.90 0.00 43.89 5.36
1530 1603 1.150081 CAGGGAGGGCACATCATCC 59.850 63.158 0.00 0.00 0.00 3.51
1548 1630 0.464036 CCGGAAATCCAGATGACGGA 59.536 55.000 0.00 0.00 42.19 4.69
1556 1638 2.950781 TCCAGATGACGGATTAGCTCT 58.049 47.619 0.00 0.00 0.00 4.09
1561 1643 4.076394 AGATGACGGATTAGCTCTAGACC 58.924 47.826 0.00 0.00 0.00 3.85
1566 1648 2.224549 CGGATTAGCTCTAGACCGACTG 59.775 54.545 10.81 0.00 37.58 3.51
1570 1652 1.912417 AGCTCTAGACCGACTGTTGT 58.088 50.000 0.00 0.00 0.00 3.32
1571 1653 1.542030 AGCTCTAGACCGACTGTTGTG 59.458 52.381 0.00 0.00 0.00 3.33
1575 1657 2.094700 TCTAGACCGACTGTTGTGCATC 60.095 50.000 0.00 0.00 0.00 3.91
1594 1676 5.163066 TGCATCCCATTAAATCTCATCTCCA 60.163 40.000 0.00 0.00 0.00 3.86
1657 1739 2.478335 TAACTGGGGCAAGGAAGGCG 62.478 60.000 0.00 0.00 34.40 5.52
1662 1744 2.815647 GGCAAGGAAGGCGTCTCG 60.816 66.667 0.00 0.00 0.00 4.04
1732 1883 0.992072 CTCGTCGTTGGTGCATACAG 59.008 55.000 0.00 0.00 0.00 2.74
1738 1889 1.359848 GTTGGTGCATACAGACGGAG 58.640 55.000 0.00 0.00 0.00 4.63
1746 1897 2.239400 CATACAGACGGAGGATGGCTA 58.761 52.381 0.00 0.00 0.00 3.93
1773 1927 2.435372 ACTCACTTGGCCAACTTGAA 57.565 45.000 16.05 4.52 0.00 2.69
1793 1950 0.552848 ATCGATGGCCATTCCCAAGT 59.447 50.000 21.84 0.00 38.61 3.16
1941 2111 1.079612 TGGATCGCTCACTGCACTG 60.080 57.895 0.00 0.00 43.06 3.66
1942 2112 2.459442 GGATCGCTCACTGCACTGC 61.459 63.158 0.00 0.00 43.06 4.40
1944 2114 1.078637 ATCGCTCACTGCACTGCAT 60.079 52.632 3.64 0.00 43.06 3.96
1947 2117 1.970114 GCTCACTGCACTGCATGGT 60.970 57.895 3.64 0.00 42.31 3.55
2030 2203 1.421268 TCTGGAGAGCTTTTCAAGGCA 59.579 47.619 0.00 0.00 0.00 4.75
2039 2212 2.359214 GCTTTTCAAGGCAGGGCTATAC 59.641 50.000 0.00 0.00 0.00 1.47
2105 2285 2.002586 CCTTACCACGTCATTCTGCAG 58.997 52.381 7.63 7.63 0.00 4.41
2126 2307 1.770110 ACCTCACCTCCCTGCAACA 60.770 57.895 0.00 0.00 0.00 3.33
2131 2312 0.620556 CACCTCCCTGCAACACCTAT 59.379 55.000 0.00 0.00 0.00 2.57
2138 2319 5.440610 CTCCCTGCAACACCTATATCTTTT 58.559 41.667 0.00 0.00 0.00 2.27
2182 2369 0.036577 AGATGAGCAAGAGCAAGCGT 60.037 50.000 0.00 0.00 45.49 5.07
2183 2370 0.096628 GATGAGCAAGAGCAAGCGTG 59.903 55.000 0.00 0.00 45.49 5.34
2218 2405 2.299867 TCCCTGCAAAAGCTCCAATTTC 59.700 45.455 0.00 0.00 0.00 2.17
2250 2437 2.550180 CGATCTCGTAGATCTTCCTGCA 59.450 50.000 17.20 0.00 46.83 4.41
2268 2455 2.203480 GGGCTGCACAACCTTCCA 60.203 61.111 0.50 0.00 0.00 3.53
2274 2461 0.251297 TGCACAACCTTCCATCCCTG 60.251 55.000 0.00 0.00 0.00 4.45
2287 2474 3.009473 TCCATCCCTGAAGAGTTTGAAGG 59.991 47.826 0.00 0.00 0.00 3.46
2292 2479 5.094387 TCCCTGAAGAGTTTGAAGGTAGAT 58.906 41.667 0.00 0.00 0.00 1.98
2297 2484 4.828072 AGAGTTTGAAGGTAGATGGGTC 57.172 45.455 0.00 0.00 0.00 4.46
2299 2486 5.590818 AGAGTTTGAAGGTAGATGGGTCTA 58.409 41.667 0.00 0.00 35.87 2.59
2337 2524 1.002011 GGAAACAGGCCTCCCACTC 60.002 63.158 0.00 0.00 0.00 3.51
2344 2531 1.610673 GGCCTCCCACTCTCACTGA 60.611 63.158 0.00 0.00 0.00 3.41
2363 2550 6.038603 TCACTGAAAGAACTGGAAATCTGTTG 59.961 38.462 0.00 0.00 37.60 3.33
2372 2559 2.034939 TGGAAATCTGTTGTTGCAGCAG 59.965 45.455 2.72 6.64 42.61 4.24
2394 2581 2.224233 GGAGCTAGCTGATCAATGCAGA 60.224 50.000 24.99 0.00 35.39 4.26
2395 2582 3.464907 GAGCTAGCTGATCAATGCAGAA 58.535 45.455 24.99 0.00 35.39 3.02
2421 2608 0.887933 CACGGGGCAAGCTAAATGTT 59.112 50.000 0.00 0.00 0.00 2.71
2433 2620 9.545611 GGCAAGCTAAATGTTAAAATTGATTTG 57.454 29.630 0.00 0.00 32.27 2.32
2486 2695 9.624697 ATGTAAGCAATATTTTTACACACACAG 57.375 29.630 17.94 0.00 39.34 3.66
2513 2725 1.103398 AGCTGCGTTGCTTTTGAGGT 61.103 50.000 0.00 0.00 40.93 3.85
2544 2756 3.181505 GCGATATATCCTCAGACCTGACG 60.182 52.174 7.15 0.00 35.46 4.35
2547 2759 5.818336 CGATATATCCTCAGACCTGACGTAT 59.182 44.000 7.15 0.00 35.46 3.06
2595 2807 0.038709 AGAACGAGCTGTCTCTGCAC 60.039 55.000 0.00 0.00 37.19 4.57
2612 2824 0.248580 CACGCACTCAAGCTGCAAAA 60.249 50.000 1.02 0.00 34.00 2.44
2626 2845 8.344831 TCAAGCTGCAAAACATATATCATGTAC 58.655 33.333 1.02 0.00 0.00 2.90
2627 2846 8.347771 CAAGCTGCAAAACATATATCATGTACT 58.652 33.333 1.02 0.00 0.00 2.73
2661 2887 7.139896 TGTGCTGTTTGTTATTCATATCGTT 57.860 32.000 0.00 0.00 0.00 3.85
2671 2897 9.820229 TTGTTATTCATATCGTTTTGTCAACTC 57.180 29.630 0.00 0.00 0.00 3.01
2689 2915 9.778741 TGTCAACTCAAAAAGATGATTACTAGT 57.221 29.630 0.00 0.00 38.82 2.57
2712 2938 7.832769 AGTACTAGAAAAGAGAGAACCACATC 58.167 38.462 0.00 0.00 0.00 3.06
2713 2939 5.715070 ACTAGAAAAGAGAGAACCACATCG 58.285 41.667 0.00 0.00 0.00 3.84
2752 2978 0.645496 TCCTTGCTATGGACCCCCTA 59.355 55.000 0.00 0.00 0.00 3.53
2756 2982 0.639943 TGCTATGGACCCCCTACAGA 59.360 55.000 0.00 0.00 0.00 3.41
2821 3048 2.167398 GAGGCCGTGGTGCTTGTCTA 62.167 60.000 0.00 0.00 0.00 2.59
2836 3063 4.216687 GCTTGTCTACGCACCTCTCTATAT 59.783 45.833 0.00 0.00 0.00 0.86
3085 3312 1.898574 CTTGCGGGCTGTGGACTTT 60.899 57.895 0.00 0.00 0.00 2.66
3098 3325 5.008613 GCTGTGGACTTTCAACATTTACTCA 59.991 40.000 0.00 0.00 0.00 3.41
3122 3349 6.896021 ATAAGATTGCTGGAAAGATCATGG 57.104 37.500 0.00 0.00 0.00 3.66
3144 3372 2.443255 CTGGCCAGGGAAGGTACATTAT 59.557 50.000 26.14 0.00 0.00 1.28
3245 3473 6.518200 GCCAAAAGGAACAATGACTTCCATTA 60.518 38.462 5.58 0.00 43.27 1.90
3354 3582 1.912862 AAGGATATGGGAGGCCTTGT 58.087 50.000 6.77 0.00 39.18 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 6.267928 ACACTAATGTCCTCAGTTCACTAACT 59.732 38.462 0.00 0.00 39.87 2.24
13 14 6.456501 ACACTAATGTCCTCAGTTCACTAAC 58.543 40.000 0.00 0.00 31.55 2.34
14 15 6.665992 ACACTAATGTCCTCAGTTCACTAA 57.334 37.500 0.00 0.00 31.55 2.24
15 16 6.665992 AACACTAATGTCCTCAGTTCACTA 57.334 37.500 0.00 0.00 38.45 2.74
16 17 5.552870 AACACTAATGTCCTCAGTTCACT 57.447 39.130 0.00 0.00 38.45 3.41
17 18 6.456501 AGTAACACTAATGTCCTCAGTTCAC 58.543 40.000 0.00 0.00 38.45 3.18
18 19 6.665992 AGTAACACTAATGTCCTCAGTTCA 57.334 37.500 0.00 0.00 38.45 3.18
19 20 6.369065 CCAAGTAACACTAATGTCCTCAGTTC 59.631 42.308 0.00 0.00 38.45 3.01
20 21 6.231211 CCAAGTAACACTAATGTCCTCAGTT 58.769 40.000 0.00 0.00 38.45 3.16
21 22 5.280011 CCCAAGTAACACTAATGTCCTCAGT 60.280 44.000 0.00 0.00 38.45 3.41
22 23 5.178797 CCCAAGTAACACTAATGTCCTCAG 58.821 45.833 0.00 0.00 38.45 3.35
23 24 4.564821 GCCCAAGTAACACTAATGTCCTCA 60.565 45.833 0.00 0.00 38.45 3.86
24 25 3.939592 GCCCAAGTAACACTAATGTCCTC 59.060 47.826 0.00 0.00 38.45 3.71
25 26 3.329520 TGCCCAAGTAACACTAATGTCCT 59.670 43.478 0.00 0.00 38.45 3.85
26 27 3.439129 GTGCCCAAGTAACACTAATGTCC 59.561 47.826 0.00 0.00 38.45 4.02
27 28 4.324267 AGTGCCCAAGTAACACTAATGTC 58.676 43.478 0.00 0.00 42.65 3.06
28 29 4.367039 AGTGCCCAAGTAACACTAATGT 57.633 40.909 0.00 0.00 42.65 2.71
29 30 6.037172 GTCATAGTGCCCAAGTAACACTAATG 59.963 42.308 6.22 6.05 46.67 1.90
30 31 6.070194 AGTCATAGTGCCCAAGTAACACTAAT 60.070 38.462 6.22 0.00 46.67 1.73
31 32 5.247564 AGTCATAGTGCCCAAGTAACACTAA 59.752 40.000 6.22 0.00 46.67 2.24
33 34 3.583086 AGTCATAGTGCCCAAGTAACACT 59.417 43.478 0.00 0.00 46.05 3.55
34 35 3.939066 AGTCATAGTGCCCAAGTAACAC 58.061 45.455 0.00 0.00 34.48 3.32
35 36 4.634012 AAGTCATAGTGCCCAAGTAACA 57.366 40.909 0.00 0.00 0.00 2.41
36 37 5.106277 GGAAAAGTCATAGTGCCCAAGTAAC 60.106 44.000 0.00 0.00 0.00 2.50
37 38 5.007682 GGAAAAGTCATAGTGCCCAAGTAA 58.992 41.667 0.00 0.00 0.00 2.24
38 39 4.288626 AGGAAAAGTCATAGTGCCCAAGTA 59.711 41.667 0.00 0.00 0.00 2.24
39 40 3.074538 AGGAAAAGTCATAGTGCCCAAGT 59.925 43.478 0.00 0.00 0.00 3.16
40 41 3.690460 AGGAAAAGTCATAGTGCCCAAG 58.310 45.455 0.00 0.00 0.00 3.61
41 42 3.806949 AGGAAAAGTCATAGTGCCCAA 57.193 42.857 0.00 0.00 0.00 4.12
42 43 3.330701 AGAAGGAAAAGTCATAGTGCCCA 59.669 43.478 0.00 0.00 0.00 5.36
43 44 3.956744 AGAAGGAAAAGTCATAGTGCCC 58.043 45.455 0.00 0.00 0.00 5.36
44 45 6.174049 AGTAAGAAGGAAAAGTCATAGTGCC 58.826 40.000 0.00 0.00 0.00 5.01
45 46 8.950208 ATAGTAAGAAGGAAAAGTCATAGTGC 57.050 34.615 0.00 0.00 0.00 4.40
72 73 9.378504 TGTGCCTTTTGGAATATATATTGGAAT 57.621 29.630 12.74 0.00 44.07 3.01
73 74 8.774546 TGTGCCTTTTGGAATATATATTGGAA 57.225 30.769 12.74 2.73 44.07 3.53
74 75 8.954834 ATGTGCCTTTTGGAATATATATTGGA 57.045 30.769 12.74 0.00 44.07 3.53
81 82 8.832521 CGTAAGTTATGTGCCTTTTGGAATATA 58.167 33.333 0.00 0.00 44.07 0.86
82 83 7.703328 CGTAAGTTATGTGCCTTTTGGAATAT 58.297 34.615 0.00 0.00 44.07 1.28
83 84 7.079182 CGTAAGTTATGTGCCTTTTGGAATA 57.921 36.000 0.00 0.00 44.07 1.75
84 85 5.949735 CGTAAGTTATGTGCCTTTTGGAAT 58.050 37.500 0.00 0.00 44.07 3.01
85 86 5.365403 CGTAAGTTATGTGCCTTTTGGAA 57.635 39.130 0.00 0.00 44.07 3.53
99 100 9.145604 GCAGACATTTGTAGCACACGTAAGTTA 62.146 40.741 0.00 0.00 37.50 2.24
100 101 8.415017 GCAGACATTTGTAGCACACGTAAGTT 62.415 42.308 0.00 0.00 37.50 2.66
101 102 7.029822 GCAGACATTTGTAGCACACGTAAGT 62.030 44.000 0.00 0.00 38.80 2.24
102 103 4.666655 GCAGACATTTGTAGCACACGTAAG 60.667 45.833 0.00 0.00 35.00 2.34
103 104 3.185594 GCAGACATTTGTAGCACACGTAA 59.814 43.478 0.00 0.00 31.82 3.18
104 105 2.734606 GCAGACATTTGTAGCACACGTA 59.265 45.455 0.00 0.00 31.82 3.57
105 106 1.531149 GCAGACATTTGTAGCACACGT 59.469 47.619 3.54 0.00 31.82 4.49
106 107 1.530720 TGCAGACATTTGTAGCACACG 59.469 47.619 6.29 0.00 35.26 4.49
107 108 3.193157 CTGCAGACATTTGTAGCACAC 57.807 47.619 8.42 0.00 35.26 3.82
112 113 4.274421 CAGATGCTGCAGACATTTGTAG 57.726 45.455 20.43 6.41 34.39 2.74
127 128 4.801891 TGTTTGAGAAAATCAGCAGATGC 58.198 39.130 0.00 0.00 39.68 3.91
128 129 5.805486 CCATGTTTGAGAAAATCAGCAGATG 59.195 40.000 0.00 0.00 39.68 2.90
129 130 5.105473 CCCATGTTTGAGAAAATCAGCAGAT 60.105 40.000 0.00 0.00 39.68 2.90
130 131 4.219070 CCCATGTTTGAGAAAATCAGCAGA 59.781 41.667 0.00 0.00 39.68 4.26
131 132 4.219070 TCCCATGTTTGAGAAAATCAGCAG 59.781 41.667 0.00 0.00 39.68 4.24
132 133 4.151121 TCCCATGTTTGAGAAAATCAGCA 58.849 39.130 0.00 0.00 39.68 4.41
133 134 4.789012 TCCCATGTTTGAGAAAATCAGC 57.211 40.909 0.00 0.00 39.68 4.26
134 135 6.927416 TCAATCCCATGTTTGAGAAAATCAG 58.073 36.000 0.00 0.00 39.68 2.90
135 136 6.071221 CCTCAATCCCATGTTTGAGAAAATCA 60.071 38.462 22.24 0.00 45.22 2.57
136 137 6.153340 TCCTCAATCCCATGTTTGAGAAAATC 59.847 38.462 22.24 0.00 45.22 2.17
137 138 6.018469 TCCTCAATCCCATGTTTGAGAAAAT 58.982 36.000 22.24 0.00 45.22 1.82
138 139 5.392995 TCCTCAATCCCATGTTTGAGAAAA 58.607 37.500 22.24 10.97 45.22 2.29
139 140 4.996793 TCCTCAATCCCATGTTTGAGAAA 58.003 39.130 22.24 12.62 45.22 2.52
140 141 4.568380 CCTCCTCAATCCCATGTTTGAGAA 60.568 45.833 22.24 9.30 45.22 2.87
141 142 3.054139 CCTCCTCAATCCCATGTTTGAGA 60.054 47.826 22.24 12.68 45.22 3.27
142 143 3.285484 CCTCCTCAATCCCATGTTTGAG 58.715 50.000 17.17 17.17 43.40 3.02
143 144 2.649312 ACCTCCTCAATCCCATGTTTGA 59.351 45.455 0.00 0.00 0.00 2.69
144 145 2.756760 CACCTCCTCAATCCCATGTTTG 59.243 50.000 0.00 0.00 0.00 2.93
145 146 2.291800 CCACCTCCTCAATCCCATGTTT 60.292 50.000 0.00 0.00 0.00 2.83
146 147 1.285962 CCACCTCCTCAATCCCATGTT 59.714 52.381 0.00 0.00 0.00 2.71
147 148 0.921896 CCACCTCCTCAATCCCATGT 59.078 55.000 0.00 0.00 0.00 3.21
148 149 1.216064 TCCACCTCCTCAATCCCATG 58.784 55.000 0.00 0.00 0.00 3.66
149 150 1.779092 CATCCACCTCCTCAATCCCAT 59.221 52.381 0.00 0.00 0.00 4.00
150 151 1.216064 CATCCACCTCCTCAATCCCA 58.784 55.000 0.00 0.00 0.00 4.37
151 152 0.475906 CCATCCACCTCCTCAATCCC 59.524 60.000 0.00 0.00 0.00 3.85
152 153 0.475906 CCCATCCACCTCCTCAATCC 59.524 60.000 0.00 0.00 0.00 3.01
153 154 1.141858 GACCCATCCACCTCCTCAATC 59.858 57.143 0.00 0.00 0.00 2.67
154 155 1.216990 GACCCATCCACCTCCTCAAT 58.783 55.000 0.00 0.00 0.00 2.57
155 156 0.119155 AGACCCATCCACCTCCTCAA 59.881 55.000 0.00 0.00 0.00 3.02
156 157 0.119155 AAGACCCATCCACCTCCTCA 59.881 55.000 0.00 0.00 0.00 3.86
157 158 1.210722 GAAAGACCCATCCACCTCCTC 59.789 57.143 0.00 0.00 0.00 3.71
158 159 1.290134 GAAAGACCCATCCACCTCCT 58.710 55.000 0.00 0.00 0.00 3.69
159 160 0.256177 GGAAAGACCCATCCACCTCC 59.744 60.000 0.00 0.00 35.71 4.30
160 161 3.884226 GGAAAGACCCATCCACCTC 57.116 57.895 0.00 0.00 35.71 3.85
180 181 8.149647 AGATGGTACAATTTGCTCAAAATTTGA 58.850 29.630 8.25 8.25 44.41 2.69
181 182 8.314143 AGATGGTACAATTTGCTCAAAATTTG 57.686 30.769 0.00 0.00 44.41 2.32
182 183 7.603784 GGAGATGGTACAATTTGCTCAAAATTT 59.396 33.333 0.00 0.00 44.41 1.82
198 199 5.301298 ACCGACTAATACTTGGAGATGGTAC 59.699 44.000 0.00 0.00 0.00 3.34
199 200 5.452255 ACCGACTAATACTTGGAGATGGTA 58.548 41.667 0.00 0.00 0.00 3.25
200 201 4.287552 ACCGACTAATACTTGGAGATGGT 58.712 43.478 0.00 0.00 0.00 3.55
201 202 4.939052 ACCGACTAATACTTGGAGATGG 57.061 45.455 0.00 0.00 0.00 3.51
202 203 5.902681 TGAACCGACTAATACTTGGAGATG 58.097 41.667 0.00 0.00 0.00 2.90
203 204 6.732896 ATGAACCGACTAATACTTGGAGAT 57.267 37.500 0.00 0.00 0.00 2.75
204 205 6.604396 TGTATGAACCGACTAATACTTGGAGA 59.396 38.462 0.00 0.00 0.00 3.71
205 206 6.802608 TGTATGAACCGACTAATACTTGGAG 58.197 40.000 0.00 0.00 0.00 3.86
206 207 6.778834 TGTATGAACCGACTAATACTTGGA 57.221 37.500 0.00 0.00 0.00 3.53
207 208 7.709182 TCATTGTATGAACCGACTAATACTTGG 59.291 37.037 0.00 0.00 36.11 3.61
208 209 8.642908 TCATTGTATGAACCGACTAATACTTG 57.357 34.615 0.00 0.00 36.11 3.16
209 210 9.477484 GATCATTGTATGAACCGACTAATACTT 57.523 33.333 0.00 0.00 43.50 2.24
210 211 7.808381 CGATCATTGTATGAACCGACTAATACT 59.192 37.037 8.26 0.00 43.50 2.12
211 212 7.594015 ACGATCATTGTATGAACCGACTAATAC 59.406 37.037 16.22 0.00 43.50 1.89
212 213 7.654568 ACGATCATTGTATGAACCGACTAATA 58.345 34.615 16.22 0.00 43.50 0.98
213 214 6.513180 ACGATCATTGTATGAACCGACTAAT 58.487 36.000 16.22 0.00 43.50 1.73
214 215 5.898174 ACGATCATTGTATGAACCGACTAA 58.102 37.500 16.22 0.00 43.50 2.24
215 216 5.509716 ACGATCATTGTATGAACCGACTA 57.490 39.130 16.22 0.00 43.50 2.59
216 217 4.386867 ACGATCATTGTATGAACCGACT 57.613 40.909 16.22 0.10 43.50 4.18
217 218 5.279384 AGTACGATCATTGTATGAACCGAC 58.721 41.667 16.22 11.62 43.50 4.79
218 219 5.509716 AGTACGATCATTGTATGAACCGA 57.490 39.130 16.22 3.98 43.50 4.69
219 220 6.183359 GCATAGTACGATCATTGTATGAACCG 60.183 42.308 0.00 10.91 43.50 4.44
220 221 6.090898 GGCATAGTACGATCATTGTATGAACC 59.909 42.308 0.00 0.00 43.50 3.62
221 222 6.868864 AGGCATAGTACGATCATTGTATGAAC 59.131 38.462 0.00 0.00 43.50 3.18
222 223 6.868339 CAGGCATAGTACGATCATTGTATGAA 59.132 38.462 0.00 0.00 43.50 2.57
223 224 6.389906 CAGGCATAGTACGATCATTGTATGA 58.610 40.000 0.00 0.00 44.55 2.15
224 225 5.578336 CCAGGCATAGTACGATCATTGTATG 59.422 44.000 0.00 0.00 0.00 2.39
225 226 5.246203 ACCAGGCATAGTACGATCATTGTAT 59.754 40.000 0.00 0.00 0.00 2.29
226 227 4.587262 ACCAGGCATAGTACGATCATTGTA 59.413 41.667 0.00 0.00 0.00 2.41
227 228 3.388024 ACCAGGCATAGTACGATCATTGT 59.612 43.478 0.00 0.00 0.00 2.71
228 229 3.995199 ACCAGGCATAGTACGATCATTG 58.005 45.455 0.00 0.00 0.00 2.82
229 230 4.141711 ACAACCAGGCATAGTACGATCATT 60.142 41.667 0.00 0.00 0.00 2.57
230 231 3.388024 ACAACCAGGCATAGTACGATCAT 59.612 43.478 0.00 0.00 0.00 2.45
231 232 2.764010 ACAACCAGGCATAGTACGATCA 59.236 45.455 0.00 0.00 0.00 2.92
232 233 3.454371 ACAACCAGGCATAGTACGATC 57.546 47.619 0.00 0.00 0.00 3.69
233 234 5.069914 TCAATACAACCAGGCATAGTACGAT 59.930 40.000 0.00 0.00 0.00 3.73
234 235 4.403113 TCAATACAACCAGGCATAGTACGA 59.597 41.667 0.00 0.00 0.00 3.43
235 236 4.689071 TCAATACAACCAGGCATAGTACG 58.311 43.478 0.00 0.00 0.00 3.67
236 237 8.848474 ATTATCAATACAACCAGGCATAGTAC 57.152 34.615 0.00 0.00 0.00 2.73
237 238 8.880244 AGATTATCAATACAACCAGGCATAGTA 58.120 33.333 0.00 0.00 0.00 1.82
238 239 7.749666 AGATTATCAATACAACCAGGCATAGT 58.250 34.615 0.00 0.00 0.00 2.12
239 240 8.509690 CAAGATTATCAATACAACCAGGCATAG 58.490 37.037 0.00 0.00 0.00 2.23
240 241 7.998383 ACAAGATTATCAATACAACCAGGCATA 59.002 33.333 0.00 0.00 0.00 3.14
241 242 6.835488 ACAAGATTATCAATACAACCAGGCAT 59.165 34.615 0.00 0.00 0.00 4.40
242 243 6.186957 ACAAGATTATCAATACAACCAGGCA 58.813 36.000 0.00 0.00 0.00 4.75
243 244 6.699575 ACAAGATTATCAATACAACCAGGC 57.300 37.500 0.00 0.00 0.00 4.85
244 245 8.345565 GCTAACAAGATTATCAATACAACCAGG 58.654 37.037 0.00 0.00 0.00 4.45
245 246 8.345565 GGCTAACAAGATTATCAATACAACCAG 58.654 37.037 0.00 0.00 0.00 4.00
246 247 8.052748 AGGCTAACAAGATTATCAATACAACCA 58.947 33.333 0.00 0.00 0.00 3.67
247 248 8.345565 CAGGCTAACAAGATTATCAATACAACC 58.654 37.037 0.00 0.00 0.00 3.77
248 249 7.857885 GCAGGCTAACAAGATTATCAATACAAC 59.142 37.037 0.00 0.00 0.00 3.32
249 250 7.254761 CGCAGGCTAACAAGATTATCAATACAA 60.255 37.037 0.00 0.00 0.00 2.41
250 251 6.202762 CGCAGGCTAACAAGATTATCAATACA 59.797 38.462 0.00 0.00 0.00 2.29
251 252 6.347725 CCGCAGGCTAACAAGATTATCAATAC 60.348 42.308 0.00 0.00 46.14 1.89
252 253 5.700832 CCGCAGGCTAACAAGATTATCAATA 59.299 40.000 0.00 0.00 46.14 1.90
253 254 4.516698 CCGCAGGCTAACAAGATTATCAAT 59.483 41.667 0.00 0.00 46.14 2.57
254 255 3.876914 CCGCAGGCTAACAAGATTATCAA 59.123 43.478 0.00 0.00 46.14 2.57
255 256 3.466836 CCGCAGGCTAACAAGATTATCA 58.533 45.455 0.00 0.00 46.14 2.15
290 291 2.972348 TGGAAGAGTACACTCCCTTGT 58.028 47.619 5.76 0.00 43.88 3.16
294 295 2.027192 TGCAATGGAAGAGTACACTCCC 60.027 50.000 5.76 0.00 43.88 4.30
295 296 3.334583 TGCAATGGAAGAGTACACTCC 57.665 47.619 5.76 0.00 43.88 3.85
301 302 4.661222 TCAATGGTTGCAATGGAAGAGTA 58.339 39.130 0.59 0.00 0.00 2.59
302 303 3.499338 TCAATGGTTGCAATGGAAGAGT 58.501 40.909 0.59 0.00 0.00 3.24
309 310 9.297586 GATAGCATATTATCAATGGTTGCAATG 57.702 33.333 0.59 0.00 36.52 2.82
323 324 9.155975 GTCGTTCCTGAAATGATAGCATATTAT 57.844 33.333 0.00 0.00 35.39 1.28
324 325 8.147704 TGTCGTTCCTGAAATGATAGCATATTA 58.852 33.333 0.00 0.00 35.39 0.98
326 327 6.524734 TGTCGTTCCTGAAATGATAGCATAT 58.475 36.000 0.00 0.00 35.39 1.78
327 328 5.912892 TGTCGTTCCTGAAATGATAGCATA 58.087 37.500 0.00 0.00 35.39 3.14
331 332 5.118990 ACCATGTCGTTCCTGAAATGATAG 58.881 41.667 0.00 0.00 35.92 2.08
332 333 5.097742 ACCATGTCGTTCCTGAAATGATA 57.902 39.130 0.00 0.00 35.92 2.15
336 337 4.141287 TGAAACCATGTCGTTCCTGAAAT 58.859 39.130 0.00 0.00 0.00 2.17
337 338 3.546724 TGAAACCATGTCGTTCCTGAAA 58.453 40.909 0.00 0.00 0.00 2.69
345 346 6.817765 ATATGAAACTTGAAACCATGTCGT 57.182 33.333 0.00 0.00 0.00 4.34
353 354 8.515414 AGCCACTAGAAATATGAAACTTGAAAC 58.485 33.333 0.00 0.00 0.00 2.78
357 358 8.514594 TCAAAGCCACTAGAAATATGAAACTTG 58.485 33.333 0.00 0.00 0.00 3.16
358 359 8.635765 TCAAAGCCACTAGAAATATGAAACTT 57.364 30.769 0.00 0.00 0.00 2.66
365 366 9.331282 GTGTTATCTCAAAGCCACTAGAAATAT 57.669 33.333 0.00 0.00 0.00 1.28
366 367 8.318412 TGTGTTATCTCAAAGCCACTAGAAATA 58.682 33.333 0.00 0.00 0.00 1.40
368 369 6.530120 TGTGTTATCTCAAAGCCACTAGAAA 58.470 36.000 0.00 0.00 0.00 2.52
370 371 5.738619 TGTGTTATCTCAAAGCCACTAGA 57.261 39.130 0.00 0.00 0.00 2.43
375 376 4.072131 GGAGTTGTGTTATCTCAAAGCCA 58.928 43.478 0.00 0.00 0.00 4.75
404 405 7.709947 AGTATTAACATGCATCCAATGTTCAG 58.290 34.615 5.92 0.00 39.08 3.02
405 406 7.557358 AGAGTATTAACATGCATCCAATGTTCA 59.443 33.333 5.92 0.00 39.08 3.18
406 407 7.859377 CAGAGTATTAACATGCATCCAATGTTC 59.141 37.037 5.92 4.67 39.08 3.18
408 409 6.263842 CCAGAGTATTAACATGCATCCAATGT 59.736 38.462 0.00 0.00 0.00 2.71
409 410 6.487668 TCCAGAGTATTAACATGCATCCAATG 59.512 38.462 0.00 0.00 0.00 2.82
411 412 6.000246 TCCAGAGTATTAACATGCATCCAA 58.000 37.500 0.00 0.00 0.00 3.53
412 413 5.628797 TCCAGAGTATTAACATGCATCCA 57.371 39.130 0.00 0.00 0.00 3.41
413 414 6.291377 TCTTCCAGAGTATTAACATGCATCC 58.709 40.000 0.00 0.00 0.00 3.51
414 415 7.443575 ACATCTTCCAGAGTATTAACATGCATC 59.556 37.037 0.00 0.00 0.00 3.91
415 416 7.285566 ACATCTTCCAGAGTATTAACATGCAT 58.714 34.615 0.00 0.00 0.00 3.96
417 418 7.559590 AACATCTTCCAGAGTATTAACATGC 57.440 36.000 0.00 0.00 0.00 4.06
426 451 5.425217 TGCCTCATAAACATCTTCCAGAGTA 59.575 40.000 0.00 0.00 0.00 2.59
431 456 3.523157 TCCTGCCTCATAAACATCTTCCA 59.477 43.478 0.00 0.00 0.00 3.53
435 460 3.118112 CCAGTCCTGCCTCATAAACATCT 60.118 47.826 0.00 0.00 0.00 2.90
438 463 1.985159 ACCAGTCCTGCCTCATAAACA 59.015 47.619 0.00 0.00 0.00 2.83
440 465 4.042311 TGTTTACCAGTCCTGCCTCATAAA 59.958 41.667 0.00 0.00 0.00 1.40
445 470 2.561478 TTGTTTACCAGTCCTGCCTC 57.439 50.000 0.00 0.00 0.00 4.70
446 471 2.375174 TCATTGTTTACCAGTCCTGCCT 59.625 45.455 0.00 0.00 0.00 4.75
456 481 7.931275 ACTTTTCTGAGAGTTCATTGTTTACC 58.069 34.615 0.00 0.00 31.68 2.85
457 482 9.226345 CAACTTTTCTGAGAGTTCATTGTTTAC 57.774 33.333 5.78 0.00 34.04 2.01
458 483 7.915397 GCAACTTTTCTGAGAGTTCATTGTTTA 59.085 33.333 5.78 0.00 34.04 2.01
465 490 4.882671 GTGCAACTTTTCTGAGAGTTCA 57.117 40.909 0.00 5.42 34.04 3.18
481 506 0.843309 TCCTTCCAGGACAAGTGCAA 59.157 50.000 0.00 0.00 40.06 4.08
506 531 0.812811 CTCCATGACCATGTCCGCAG 60.813 60.000 8.93 0.00 37.11 5.18
507 532 1.221566 CTCCATGACCATGTCCGCA 59.778 57.895 8.93 0.00 37.11 5.69
508 533 1.524621 CCTCCATGACCATGTCCGC 60.525 63.158 8.93 0.00 37.11 5.54
509 534 0.253044 AACCTCCATGACCATGTCCG 59.747 55.000 8.93 0.00 37.11 4.79
510 535 1.281867 TCAACCTCCATGACCATGTCC 59.718 52.381 8.93 0.00 37.11 4.02
513 538 1.409241 CCCTCAACCTCCATGACCATG 60.409 57.143 0.00 3.11 38.51 3.66
515 540 0.475632 ACCCTCAACCTCCATGACCA 60.476 55.000 0.00 0.00 0.00 4.02
516 541 0.698818 AACCCTCAACCTCCATGACC 59.301 55.000 0.00 0.00 0.00 4.02
518 543 0.698238 CCAACCCTCAACCTCCATGA 59.302 55.000 0.00 0.00 0.00 3.07
519 544 0.323725 CCCAACCCTCAACCTCCATG 60.324 60.000 0.00 0.00 0.00 3.66
520 545 0.477597 TCCCAACCCTCAACCTCCAT 60.478 55.000 0.00 0.00 0.00 3.41
521 546 0.699577 TTCCCAACCCTCAACCTCCA 60.700 55.000 0.00 0.00 0.00 3.86
522 547 0.251209 GTTCCCAACCCTCAACCTCC 60.251 60.000 0.00 0.00 0.00 4.30
523 548 0.251209 GGTTCCCAACCCTCAACCTC 60.251 60.000 0.00 0.00 46.12 3.85
524 549 1.851267 GGTTCCCAACCCTCAACCT 59.149 57.895 0.00 0.00 46.12 3.50
525 550 4.513777 GGTTCCCAACCCTCAACC 57.486 61.111 0.00 0.00 46.12 3.77
535 581 0.856982 AAGTCCCAATGTGGTTCCCA 59.143 50.000 0.00 0.00 35.17 4.37
536 582 2.891191 TAAGTCCCAATGTGGTTCCC 57.109 50.000 0.00 0.00 35.17 3.97
537 583 3.089284 CCTTAAGTCCCAATGTGGTTCC 58.911 50.000 0.97 0.00 35.17 3.62
547 593 2.176889 CTCGAGAACCCTTAAGTCCCA 58.823 52.381 6.58 0.00 0.00 4.37
548 594 2.454538 TCTCGAGAACCCTTAAGTCCC 58.545 52.381 14.01 0.00 0.00 4.46
551 597 5.536916 CCAGATATCTCGAGAACCCTTAAGT 59.463 44.000 20.91 1.57 0.00 2.24
552 598 5.047660 CCCAGATATCTCGAGAACCCTTAAG 60.048 48.000 20.91 4.61 0.00 1.85
557 603 2.599677 ACCCAGATATCTCGAGAACCC 58.400 52.381 20.91 10.91 0.00 4.11
559 605 9.930693 AAAATTATACCCAGATATCTCGAGAAC 57.069 33.333 20.91 13.64 0.00 3.01
560 606 9.929180 CAAAATTATACCCAGATATCTCGAGAA 57.071 33.333 20.91 9.41 0.00 2.87
564 610 8.446273 CAAGCAAAATTATACCCAGATATCTCG 58.554 37.037 1.03 0.00 0.00 4.04
565 611 8.734386 CCAAGCAAAATTATACCCAGATATCTC 58.266 37.037 1.03 0.00 0.00 2.75
567 613 8.515414 GTCCAAGCAAAATTATACCCAGATATC 58.485 37.037 0.00 0.00 0.00 1.63
574 620 9.260002 CATAATTGTCCAAGCAAAATTATACCC 57.740 33.333 0.00 0.00 34.83 3.69
575 621 9.260002 CCATAATTGTCCAAGCAAAATTATACC 57.740 33.333 0.00 0.00 34.83 2.73
583 629 5.069648 TGTCAACCATAATTGTCCAAGCAAA 59.930 36.000 0.00 0.00 31.63 3.68
584 630 4.586421 TGTCAACCATAATTGTCCAAGCAA 59.414 37.500 0.00 0.00 0.00 3.91
586 632 4.782019 TGTCAACCATAATTGTCCAAGC 57.218 40.909 0.00 0.00 0.00 4.01
589 635 6.662865 AATGTTGTCAACCATAATTGTCCA 57.337 33.333 13.13 0.00 0.00 4.02
590 636 8.686334 AGATAATGTTGTCAACCATAATTGTCC 58.314 33.333 13.13 1.58 0.00 4.02
592 638 9.859427 CAAGATAATGTTGTCAACCATAATTGT 57.141 29.630 13.13 4.65 0.00 2.71
595 641 8.593945 ACCAAGATAATGTTGTCAACCATAAT 57.406 30.769 13.13 2.02 0.00 1.28
596 642 8.415950 AACCAAGATAATGTTGTCAACCATAA 57.584 30.769 13.13 0.00 0.00 1.90
597 643 8.952278 GTAACCAAGATAATGTTGTCAACCATA 58.048 33.333 13.13 6.63 0.00 2.74
599 645 6.207810 GGTAACCAAGATAATGTTGTCAACCA 59.792 38.462 13.13 2.16 0.00 3.67
600 646 6.433093 AGGTAACCAAGATAATGTTGTCAACC 59.567 38.462 13.13 0.00 37.17 3.77
601 647 7.361799 GGAGGTAACCAAGATAATGTTGTCAAC 60.362 40.741 8.86 8.86 37.17 3.18
605 654 6.388619 AGGAGGTAACCAAGATAATGTTGT 57.611 37.500 0.00 0.00 37.17 3.32
611 660 4.037927 CTGGGAGGAGGTAACCAAGATAA 58.962 47.826 0.00 0.00 31.63 1.75
617 666 0.613853 CGTCTGGGAGGAGGTAACCA 60.614 60.000 0.00 0.00 37.17 3.67
629 678 1.299541 GCATATGTGAACCGTCTGGG 58.700 55.000 4.29 0.00 40.75 4.45
630 679 0.930310 CGCATATGTGAACCGTCTGG 59.070 55.000 10.90 0.00 42.84 3.86
647 696 5.750067 AGTATTTTCCATTCAATGCAATCGC 59.250 36.000 0.00 0.00 39.24 4.58
679 728 4.021368 TGTCAAAAACCGAAACCTTTCCAA 60.021 37.500 0.00 0.00 33.68 3.53
683 732 4.390603 GCTTTGTCAAAAACCGAAACCTTT 59.609 37.500 0.00 0.00 0.00 3.11
692 741 3.801114 ACTCCAGCTTTGTCAAAAACC 57.199 42.857 0.00 0.00 0.00 3.27
697 746 3.558931 TCTCAACTCCAGCTTTGTCAA 57.441 42.857 0.00 0.00 0.00 3.18
709 758 4.390264 ACTTTAGGCAGGTTTCTCAACTC 58.610 43.478 0.00 0.00 32.90 3.01
717 766 9.749340 AGTATTTGTATTACTTTAGGCAGGTTT 57.251 29.630 0.00 0.00 0.00 3.27
736 785 4.651778 TCCAGTGAAGGAACCAGTATTTG 58.348 43.478 0.00 0.00 33.93 2.32
739 788 2.840651 CCTCCAGTGAAGGAACCAGTAT 59.159 50.000 0.00 0.00 37.20 2.12
742 791 1.277557 CTCCTCCAGTGAAGGAACCAG 59.722 57.143 0.00 0.00 37.20 4.00
810 859 3.003897 GTCTAGAGCTCATACCTTCCACG 59.996 52.174 17.77 0.00 0.00 4.94
831 880 3.369261 CCTTGATCTGCAGTGCTCTTAGT 60.369 47.826 17.60 0.00 0.00 2.24
850 899 5.222007 ACTCCTTCAGTGATTGACAATCCTT 60.222 40.000 22.44 10.00 37.09 3.36
862 911 4.963318 ACAGATCAAACTCCTTCAGTGA 57.037 40.909 0.00 0.00 34.56 3.41
940 989 3.942115 GGGCAATTCTCCAGACTTAGTTC 59.058 47.826 0.00 0.00 0.00 3.01
943 992 2.422093 GGGGGCAATTCTCCAGACTTAG 60.422 54.545 0.00 0.00 0.00 2.18
947 996 0.259938 ATGGGGGCAATTCTCCAGAC 59.740 55.000 0.00 0.00 32.30 3.51
954 1003 3.244526 ACACTTTCAAATGGGGGCAATTC 60.245 43.478 0.00 0.00 0.00 2.17
955 1004 2.710471 ACACTTTCAAATGGGGGCAATT 59.290 40.909 0.00 0.00 0.00 2.32
963 1012 4.038402 AGAGGCTTCAACACTTTCAAATGG 59.962 41.667 0.00 0.00 0.00 3.16
992 1041 2.149578 ACTCAGAACACATGCTTGAGC 58.850 47.619 6.60 0.00 42.50 4.26
998 1047 5.063186 CAGATGAGTAACTCAGAACACATGC 59.937 44.000 0.00 0.00 44.08 4.06
1001 1050 5.301805 TCACAGATGAGTAACTCAGAACACA 59.698 40.000 0.00 0.00 44.08 3.72
1002 1051 5.631512 GTCACAGATGAGTAACTCAGAACAC 59.368 44.000 0.00 0.00 44.08 3.32
1021 1070 1.661617 CGGAAGTGTTGAAACGTCACA 59.338 47.619 7.04 0.00 34.94 3.58
1044 1093 5.866207 TCTTCATCAGATGATCCCTTCATG 58.134 41.667 14.11 0.00 45.29 3.07
1061 1113 9.730705 CATCATACCCAATACATAACTCTTCAT 57.269 33.333 0.00 0.00 0.00 2.57
1066 1118 7.450074 TCACCATCATACCCAATACATAACTC 58.550 38.462 0.00 0.00 0.00 3.01
1081 1133 5.093677 ACCATAGCCATACTCACCATCATA 58.906 41.667 0.00 0.00 0.00 2.15
1085 1137 4.796110 AAACCATAGCCATACTCACCAT 57.204 40.909 0.00 0.00 0.00 3.55
1088 1140 4.034048 CGTCAAAACCATAGCCATACTCAC 59.966 45.833 0.00 0.00 0.00 3.51
1099 1153 4.823157 TCGGAAGATTCGTCAAAACCATA 58.177 39.130 2.06 0.00 33.31 2.74
1119 1177 5.689514 GTCATCCAGTATCTTCAACTCATCG 59.310 44.000 0.00 0.00 0.00 3.84
1130 1188 7.039504 ACAGCAAAATTTTGTCATCCAGTATCT 60.040 33.333 27.13 11.67 40.24 1.98
1167 1225 5.371115 TCACCATCGATTTGAGGTTTTTC 57.629 39.130 2.51 0.00 30.44 2.29
1169 1227 5.943416 TGTATCACCATCGATTTGAGGTTTT 59.057 36.000 11.23 2.36 30.44 2.43
1192 1250 2.643551 ACTTAGATTCCGGCAACCATG 58.356 47.619 0.00 0.00 0.00 3.66
1272 1330 8.562892 TCATTTGAAGCAAAAAGTTTTTCACAA 58.437 25.926 10.66 11.07 36.90 3.33
1287 1345 3.014623 CTCTGGCATCTCATTTGAAGCA 58.985 45.455 0.00 0.00 0.00 3.91
1288 1346 2.223525 GCTCTGGCATCTCATTTGAAGC 60.224 50.000 0.00 0.00 38.54 3.86
1317 1375 4.997905 ATTCACAAGTGTCACATCTTCG 57.002 40.909 5.62 0.00 0.00 3.79
1330 1388 3.062042 GGAAAGCCTTGCAATTCACAAG 58.938 45.455 11.51 9.77 43.36 3.16
1359 1417 7.342942 CACATGAATCAATACTGAGACATTCG 58.657 38.462 0.00 0.00 34.23 3.34
1363 1421 6.053632 ACCACATGAATCAATACTGAGACA 57.946 37.500 0.00 0.00 34.23 3.41
1386 1444 4.487282 AGATAGCCACTTCCCCACTATA 57.513 45.455 0.00 0.00 0.00 1.31
1391 1449 2.274542 TCAAAGATAGCCACTTCCCCA 58.725 47.619 0.00 0.00 0.00 4.96
1454 1512 6.006449 TCTTCTGATTTTTCTTCCTCTTGGG 58.994 40.000 0.00 0.00 0.00 4.12
1455 1513 6.150809 CCTCTTCTGATTTTTCTTCCTCTTGG 59.849 42.308 0.00 0.00 0.00 3.61
1456 1514 6.939163 TCCTCTTCTGATTTTTCTTCCTCTTG 59.061 38.462 0.00 0.00 0.00 3.02
1457 1515 7.084268 TCCTCTTCTGATTTTTCTTCCTCTT 57.916 36.000 0.00 0.00 0.00 2.85
1458 1516 6.694445 TCCTCTTCTGATTTTTCTTCCTCT 57.306 37.500 0.00 0.00 0.00 3.69
1461 1519 7.751768 TTCTTCCTCTTCTGATTTTTCTTCC 57.248 36.000 0.00 0.00 0.00 3.46
1462 1520 9.457110 GTTTTCTTCCTCTTCTGATTTTTCTTC 57.543 33.333 0.00 0.00 0.00 2.87
1464 1522 8.525290 TGTTTTCTTCCTCTTCTGATTTTTCT 57.475 30.769 0.00 0.00 0.00 2.52
1465 1523 8.409371 ACTGTTTTCTTCCTCTTCTGATTTTTC 58.591 33.333 0.00 0.00 0.00 2.29
1466 1524 8.298729 ACTGTTTTCTTCCTCTTCTGATTTTT 57.701 30.769 0.00 0.00 0.00 1.94
1471 1529 9.035890 TGATATACTGTTTTCTTCCTCTTCTGA 57.964 33.333 0.00 0.00 0.00 3.27
1492 1565 6.101734 TCCCTGGTTGAGCTAAGATTTGATAT 59.898 38.462 0.00 0.00 0.00 1.63
1505 1578 3.650950 TGCCCTCCCTGGTTGAGC 61.651 66.667 0.00 0.00 0.00 4.26
1510 1583 1.620589 ATGATGTGCCCTCCCTGGT 60.621 57.895 0.00 0.00 0.00 4.00
1520 1593 1.605710 CTGGATTTCCGGATGATGTGC 59.394 52.381 4.15 0.00 45.36 4.57
1530 1603 2.533266 ATCCGTCATCTGGATTTCCG 57.467 50.000 0.00 0.00 43.76 4.30
1548 1630 4.017808 ACAACAGTCGGTCTAGAGCTAAT 58.982 43.478 19.17 5.48 0.00 1.73
1556 1638 1.067142 GGATGCACAACAGTCGGTCTA 60.067 52.381 0.00 0.00 0.00 2.59
1561 1643 1.167851 AATGGGATGCACAACAGTCG 58.832 50.000 0.00 0.00 0.00 4.18
1566 1648 5.581126 TGAGATTTAATGGGATGCACAAC 57.419 39.130 0.00 0.00 0.00 3.32
1570 1652 5.163066 TGGAGATGAGATTTAATGGGATGCA 60.163 40.000 0.00 0.00 0.00 3.96
1571 1653 5.319453 TGGAGATGAGATTTAATGGGATGC 58.681 41.667 0.00 0.00 0.00 3.91
1575 1657 9.578576 TTTAGAATGGAGATGAGATTTAATGGG 57.421 33.333 0.00 0.00 0.00 4.00
1628 1710 4.956075 CCTTGCCCCAGTTAAATGTTAGAT 59.044 41.667 1.80 0.00 0.00 1.98
1732 1883 1.465200 GGGAGTAGCCATCCTCCGTC 61.465 65.000 0.00 0.00 46.83 4.79
1738 1889 0.389757 GAGTTCGGGAGTAGCCATCC 59.610 60.000 0.00 0.00 38.95 3.51
1746 1897 1.371558 GCCAAGTGAGTTCGGGAGT 59.628 57.895 0.00 0.00 0.00 3.85
1773 1927 1.063717 ACTTGGGAATGGCCATCGATT 60.064 47.619 21.08 3.20 38.95 3.34
1942 2112 1.134907 GCCAAGGAATTGCAGACCATG 60.135 52.381 0.00 6.46 0.00 3.66
1944 2114 0.178967 TGCCAAGGAATTGCAGACCA 60.179 50.000 0.00 0.00 0.00 4.02
1985 2158 2.598394 GCAAGCCAGGGCACTTGA 60.598 61.111 13.63 0.00 44.89 3.02
2039 2212 2.501223 TTCCAGCCGAGGTAACAGCG 62.501 60.000 0.00 0.00 41.41 5.18
2043 2223 1.025113 GCCTTTCCAGCCGAGGTAAC 61.025 60.000 0.00 0.00 33.03 2.50
2045 2225 1.198759 AAGCCTTTCCAGCCGAGGTA 61.199 55.000 0.00 0.00 33.03 3.08
2046 2226 2.069165 AAAGCCTTTCCAGCCGAGGT 62.069 55.000 0.00 0.00 33.03 3.85
2105 2285 4.416738 GCAGGGAGGTGAGGTGCC 62.417 72.222 0.00 0.00 0.00 5.01
2138 2319 6.814644 TGTTAGTCTCGTCACTTTCAAGAAAA 59.185 34.615 0.00 0.00 0.00 2.29
2182 2369 0.764369 AGGGACTTGAGGAGCACACA 60.764 55.000 0.00 0.00 27.25 3.72
2183 2370 0.321122 CAGGGACTTGAGGAGCACAC 60.321 60.000 0.00 0.00 34.60 3.82
2218 2405 5.419760 TCTACGAGATCGGAACAATACTG 57.580 43.478 7.22 0.00 44.95 2.74
2250 2437 2.085343 ATGGAAGGTTGTGCAGCCCT 62.085 55.000 1.38 0.00 31.34 5.19
2268 2455 5.094387 TCTACCTTCAAACTCTTCAGGGAT 58.906 41.667 0.00 0.00 0.00 3.85
2274 2461 5.046231 AGACCCATCTACCTTCAAACTCTTC 60.046 44.000 0.00 0.00 31.46 2.87
2287 2474 1.903183 GATGCCCCTAGACCCATCTAC 59.097 57.143 0.00 0.00 36.29 2.59
2292 2479 0.044092 TTGAGATGCCCCTAGACCCA 59.956 55.000 0.00 0.00 0.00 4.51
2297 2484 0.108207 CAGCCTTGAGATGCCCCTAG 59.892 60.000 0.00 0.00 0.00 3.02
2299 2486 3.004951 CAGCCTTGAGATGCCCCT 58.995 61.111 0.00 0.00 0.00 4.79
2337 2524 5.762218 ACAGATTTCCAGTTCTTTCAGTGAG 59.238 40.000 0.00 0.00 0.00 3.51
2344 2531 5.105392 TGCAACAACAGATTTCCAGTTCTTT 60.105 36.000 0.00 0.00 0.00 2.52
2372 2559 1.202734 TGCATTGATCAGCTAGCTCCC 60.203 52.381 16.15 7.42 0.00 4.30
2394 2581 1.378514 CTTGCCCCGTGGTAGCATT 60.379 57.895 0.00 0.00 36.20 3.56
2395 2582 2.272146 CTTGCCCCGTGGTAGCAT 59.728 61.111 0.00 0.00 36.20 3.79
2405 2592 6.169800 TCAATTTTAACATTTAGCTTGCCCC 58.830 36.000 0.00 0.00 0.00 5.80
2407 2594 9.545611 CAAATCAATTTTAACATTTAGCTTGCC 57.454 29.630 0.00 0.00 0.00 4.52
2433 2620 7.095649 GGCCTTGAGTAATCAAATCAAAAACAC 60.096 37.037 7.08 0.00 32.87 3.32
2443 2630 5.125417 GCTTACATGGCCTTGAGTAATCAAA 59.875 40.000 24.48 0.00 0.00 2.69
2454 2641 7.763985 GTGTAAAAATATTGCTTACATGGCCTT 59.236 33.333 18.98 0.00 37.73 4.35
2486 2695 4.410492 AAAGCAACGCAGCTATATATGC 57.590 40.909 2.37 0.00 45.89 3.14
2499 2711 4.911610 CACAAGATTACCTCAAAAGCAACG 59.088 41.667 0.00 0.00 0.00 4.10
2513 2725 7.363007 GGTCTGAGGATATATCGCACAAGATTA 60.363 40.741 6.64 0.00 32.39 1.75
2544 2756 4.024893 CACACCGCACATTTATGAGGATAC 60.025 45.833 2.37 0.00 41.76 2.24
2547 2759 2.355197 CACACCGCACATTTATGAGGA 58.645 47.619 2.37 0.00 41.76 3.71
2595 2807 0.248580 TGTTTTGCAGCTTGAGTGCG 60.249 50.000 0.00 0.00 44.35 5.34
2612 2824 5.187772 ACATGCCGGAGTACATGATATATGT 59.812 40.000 21.95 1.48 45.23 2.29
2685 2911 8.338072 TGTGGTTCTCTCTTTTCTAGTACTAG 57.662 38.462 21.87 21.87 34.56 2.57
2686 2912 8.880991 ATGTGGTTCTCTCTTTTCTAGTACTA 57.119 34.615 1.89 1.89 0.00 1.82
2687 2913 7.362229 CGATGTGGTTCTCTCTTTTCTAGTACT 60.362 40.741 0.00 0.00 0.00 2.73
2688 2914 6.748198 CGATGTGGTTCTCTCTTTTCTAGTAC 59.252 42.308 0.00 0.00 0.00 2.73
2689 2915 6.433404 ACGATGTGGTTCTCTCTTTTCTAGTA 59.567 38.462 0.00 0.00 0.00 1.82
2690 2916 5.244178 ACGATGTGGTTCTCTCTTTTCTAGT 59.756 40.000 0.00 0.00 0.00 2.57
2712 2938 1.164041 AAACAGAAGGGGCGACAACG 61.164 55.000 0.00 0.00 42.93 4.10
2713 2939 0.310854 CAAACAGAAGGGGCGACAAC 59.689 55.000 0.00 0.00 0.00 3.32
2752 2978 1.880027 GCCACGTCCAAGATTTTCTGT 59.120 47.619 0.00 0.00 0.00 3.41
2756 2982 1.001815 CGTTGCCACGTCCAAGATTTT 60.002 47.619 1.47 0.00 41.84 1.82
2776 3002 4.156455 TCTATGCAGGTCTCCATTTTCC 57.844 45.455 0.00 0.00 0.00 3.13
2815 3042 4.023107 GCATATAGAGAGGTGCGTAGACAA 60.023 45.833 0.00 0.00 0.00 3.18
2918 3145 2.303600 TGTTTGTAACTAGGCCGGTGAT 59.696 45.455 1.90 0.00 0.00 3.06
3048 3275 1.071605 GCGATGAATGGATAGCGGAC 58.928 55.000 0.00 0.00 0.00 4.79
3085 3312 8.461222 CCAGCAATCTTATTGAGTAAATGTTGA 58.539 33.333 3.86 0.00 0.00 3.18
3098 3325 6.239232 GCCATGATCTTTCCAGCAATCTTATT 60.239 38.462 0.00 0.00 0.00 1.40
3122 3349 1.926426 ATGTACCTTCCCTGGCCAGC 61.926 60.000 28.39 11.47 0.00 4.85
3144 3372 2.124768 TGGTCCTCCCAGCCATCA 59.875 61.111 0.00 0.00 38.72 3.07
3245 3473 2.034687 AGCCCGTTGCAGCTTGAT 59.965 55.556 0.00 0.00 44.83 2.57
3354 3582 4.263860 TGAATTTGTCCATGTCCAGGATGA 60.264 41.667 0.00 0.00 39.69 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.