Multiple sequence alignment - TraesCS2B01G488100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G488100 chr2B 100.000 2366 0 0 1 2366 685279054 685281419 0.000000e+00 4370
1 TraesCS2B01G488100 chr2B 90.160 752 59 12 718 1462 686449451 686450194 0.000000e+00 965
2 TraesCS2B01G488100 chr2B 89.404 755 62 13 718 1462 685605303 685606049 0.000000e+00 935
3 TraesCS2B01G488100 chr2B 87.056 788 60 24 699 1462 685762903 685763672 0.000000e+00 852
4 TraesCS2B01G488100 chr2B 85.934 782 75 20 699 1462 686342833 686343597 0.000000e+00 802
5 TraesCS2B01G488100 chr2B 92.341 457 29 3 1912 2362 755526985 755526529 0.000000e+00 645
6 TraesCS2B01G488100 chr2B 89.489 333 18 6 1543 1862 685763672 685764000 2.830000e-109 405
7 TraesCS2B01G488100 chr2B 84.539 401 57 5 1930 2328 401281986 401281589 2.200000e-105 392
8 TraesCS2B01G488100 chr2B 83.894 416 59 5 959 1367 685518107 685518521 7.930000e-105 390
9 TraesCS2B01G488100 chr2B 83.654 416 60 5 959 1367 685502825 685503239 3.690000e-103 385
10 TraesCS2B01G488100 chr2B 86.765 340 45 0 1034 1373 686808293 686808632 1.720000e-101 379
11 TraesCS2B01G488100 chr2B 88.629 299 29 5 2071 2365 608697179 608697476 2.240000e-95 359
12 TraesCS2B01G488100 chr2B 90.706 269 17 7 1543 1804 686450194 686450461 3.740000e-93 351
13 TraesCS2B01G488100 chr2B 90.000 210 14 4 1600 1804 686343640 686343847 5.010000e-67 265
14 TraesCS2B01G488100 chr2B 84.000 275 13 10 1543 1804 685606049 685606305 3.930000e-58 235
15 TraesCS2B01G488100 chr6B 94.928 690 33 1 1 688 702303658 702302969 0.000000e+00 1079
16 TraesCS2B01G488100 chr6B 94.898 98 4 1 1458 1554 369835156 369835059 4.070000e-33 152
17 TraesCS2B01G488100 chr6B 94.059 101 4 2 1461 1559 481942973 481942873 4.070000e-33 152
18 TraesCS2B01G488100 chr6B 94.059 101 3 2 1453 1550 132894257 132894357 1.460000e-32 150
19 TraesCS2B01G488100 chr3B 94.622 688 36 1 2 688 539095079 539094392 0.000000e+00 1064
20 TraesCS2B01G488100 chr3B 93.605 688 42 2 1 688 740512302 740512987 0.000000e+00 1026
21 TraesCS2B01G488100 chr3B 94.118 102 4 2 1445 1546 816303142 816303241 1.130000e-33 154
22 TraesCS2B01G488100 chr3B 92.308 104 7 1 1457 1559 572247362 572247465 1.890000e-31 147
23 TraesCS2B01G488100 chr5A 94.331 688 38 1 2 688 593102730 593103417 0.000000e+00 1053
24 TraesCS2B01G488100 chr3D 95.075 670 32 1 19 688 598481253 598480585 0.000000e+00 1053
25 TraesCS2B01G488100 chr3D 90.909 319 27 1 1909 2225 321520672 321520990 6.040000e-116 427
26 TraesCS2B01G488100 chr4A 94.067 691 38 1 1 688 514739984 514740674 0.000000e+00 1046
27 TraesCS2B01G488100 chr7B 94.049 689 37 3 2 688 559673044 559672358 0.000000e+00 1042
28 TraesCS2B01G488100 chr7B 87.373 689 76 3 1 688 132181911 132181233 0.000000e+00 780
29 TraesCS2B01G488100 chr7B 88.357 627 69 4 64 688 57677605 57678229 0.000000e+00 750
30 TraesCS2B01G488100 chr7B 85.470 702 81 10 1 688 586243426 586244120 0.000000e+00 712
31 TraesCS2B01G488100 chr7B 90.536 317 26 1 1909 2221 393541767 393542083 1.310000e-112 416
32 TraesCS2B01G488100 chr7B 97.826 92 2 0 1461 1552 715301936 715302027 2.430000e-35 159
33 TraesCS2B01G488100 chr7B 95.789 95 4 0 1461 1555 426885384 426885478 1.130000e-33 154
34 TraesCS2B01G488100 chr6D 93.895 688 41 1 1 688 123974268 123974954 0.000000e+00 1037
35 TraesCS2B01G488100 chr6D 91.304 690 57 3 1 688 306880769 306880081 0.000000e+00 939
36 TraesCS2B01G488100 chr6D 72.317 643 138 28 72 688 16750129 16750757 5.230000e-37 165
37 TraesCS2B01G488100 chr6D 97.701 87 2 0 1461 1547 26359301 26359215 1.460000e-32 150
38 TraesCS2B01G488100 chr6D 94.681 94 5 0 1458 1551 194007032 194007125 1.890000e-31 147
39 TraesCS2B01G488100 chr6D 94.681 94 3 2 1461 1553 119342009 119342101 6.820000e-31 145
40 TraesCS2B01G488100 chr6D 93.750 96 5 1 1457 1551 401201718 401201623 2.450000e-30 143
41 TraesCS2B01G488100 chr7A 93.632 691 41 1 1 688 87449225 87449915 0.000000e+00 1029
42 TraesCS2B01G488100 chr7A 86.807 379 36 8 1909 2275 338052159 338052535 6.090000e-111 411
43 TraesCS2B01G488100 chr1B 93.169 688 47 0 1 688 604712738 604712051 0.000000e+00 1011
44 TraesCS2B01G488100 chr1B 92.587 688 51 0 1 688 604665873 604665186 0.000000e+00 989
45 TraesCS2B01G488100 chr1B 96.703 91 3 0 1460 1550 280164121 280164211 4.070000e-33 152
46 TraesCS2B01G488100 chr2D 91.872 689 54 2 1 688 435329504 435330191 0.000000e+00 961
47 TraesCS2B01G488100 chr1D 90.580 690 58 3 1 688 400178311 400177627 0.000000e+00 907
48 TraesCS2B01G488100 chr1D 81.567 689 121 6 2 688 15035164 15035848 4.410000e-157 564
49 TraesCS2B01G488100 chr1D 94.792 96 3 2 1461 1556 97421556 97421649 5.270000e-32 148
50 TraesCS2B01G488100 chr7D 90.145 690 64 4 1 688 133426528 133425841 0.000000e+00 894
51 TraesCS2B01G488100 chr7D 87.871 371 39 5 1909 2277 228407477 228407111 4.670000e-117 431
52 TraesCS2B01G488100 chr7D 88.215 297 30 5 2069 2361 571322829 571322534 1.350000e-92 350
53 TraesCS2B01G488100 chr1A 90.014 691 64 5 1 688 554974142 554973454 0.000000e+00 889
54 TraesCS2B01G488100 chr1A 89.115 689 71 4 3 688 440418916 440418229 0.000000e+00 854
55 TraesCS2B01G488100 chr1A 89.783 323 27 2 1909 2225 252126779 252127101 2.190000e-110 409
56 TraesCS2B01G488100 chr1A 95.876 97 3 1 1461 1557 52572281 52572376 3.150000e-34 156
57 TraesCS2B01G488100 chr1A 97.727 88 2 0 1460 1547 504269085 504269172 4.070000e-33 152
58 TraesCS2B01G488100 chr2A 88.606 746 59 15 718 1459 711021000 711021723 0.000000e+00 883
59 TraesCS2B01G488100 chr2A 86.567 335 45 0 1034 1368 711033185 711033519 1.030000e-98 370
60 TraesCS2B01G488100 chr2A 81.818 275 21 14 1543 1804 711021726 711021984 1.110000e-48 204
61 TraesCS2B01G488100 chr2A 95.833 96 2 2 1461 1555 193876551 193876457 1.130000e-33 154
62 TraesCS2B01G488100 chr2A 92.453 106 5 2 1461 1563 153361939 153361834 5.270000e-32 148
63 TraesCS2B01G488100 chr5B 97.133 279 8 0 1907 2185 72383488 72383766 2.750000e-129 472
64 TraesCS2B01G488100 chr4B 95.745 282 12 0 1906 2187 445473852 445473571 2.770000e-124 455
65 TraesCS2B01G488100 chr4B 98.837 86 1 0 1461 1546 58761409 58761324 1.130000e-33 154
66 TraesCS2B01G488100 chr4B 84.868 152 22 1 539 690 645895702 645895852 4.070000e-33 152
67 TraesCS2B01G488100 chr4B 96.667 90 3 0 1461 1550 6009933 6010022 1.460000e-32 150
68 TraesCS2B01G488100 chr6A 86.495 311 25 6 1 309 14513607 14513902 2.270000e-85 326
69 TraesCS2B01G488100 chr6A 94.898 98 5 0 1461 1558 51946553 51946456 1.130000e-33 154
70 TraesCS2B01G488100 chrUn 97.753 89 2 0 1461 1549 97273184 97273096 1.130000e-33 154
71 TraesCS2B01G488100 chrUn 96.703 91 3 0 1461 1551 65676673 65676763 4.070000e-33 152
72 TraesCS2B01G488100 chrUn 96.667 90 3 0 1461 1550 263385964 263385875 1.460000e-32 150
73 TraesCS2B01G488100 chrUn 96.667 90 3 0 1461 1550 344444770 344444681 1.460000e-32 150
74 TraesCS2B01G488100 chrUn 97.674 86 2 0 1461 1546 15864344 15864259 5.270000e-32 148
75 TraesCS2B01G488100 chrUn 95.556 90 4 0 1461 1550 35713256 35713345 6.820000e-31 145
76 TraesCS2B01G488100 chrUn 95.506 89 4 0 1461 1549 37289250 37289162 2.450000e-30 143
77 TraesCS2B01G488100 chrUn 95.506 89 4 0 1461 1549 37292426 37292338 2.450000e-30 143
78 TraesCS2B01G488100 chrUn 93.684 95 6 0 1461 1555 84437838 84437932 2.450000e-30 143
79 TraesCS2B01G488100 chrUn 93.617 94 6 0 1456 1549 12907678 12907585 8.820000e-30 141
80 TraesCS2B01G488100 chrUn 93.617 94 6 0 1461 1554 122302186 122302093 8.820000e-30 141
81 TraesCS2B01G488100 chr4D 97.701 87 2 0 1461 1547 9296552 9296466 1.460000e-32 150
82 TraesCS2B01G488100 chr4D 96.667 90 3 0 1461 1550 216743465 216743554 1.460000e-32 150
83 TraesCS2B01G488100 chr4D 95.604 91 4 0 1461 1551 164649541 164649451 1.890000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G488100 chr2B 685279054 685281419 2365 False 4370.0 4370 100.0000 1 2366 1 chr2B.!!$F2 2365
1 TraesCS2B01G488100 chr2B 686449451 686450461 1010 False 658.0 965 90.4330 718 1804 2 chr2B.!!$F9 1086
2 TraesCS2B01G488100 chr2B 685762903 685764000 1097 False 628.5 852 88.2725 699 1862 2 chr2B.!!$F7 1163
3 TraesCS2B01G488100 chr2B 685605303 685606305 1002 False 585.0 935 86.7020 718 1804 2 chr2B.!!$F6 1086
4 TraesCS2B01G488100 chr2B 686342833 686343847 1014 False 533.5 802 87.9670 699 1804 2 chr2B.!!$F8 1105
5 TraesCS2B01G488100 chr6B 702302969 702303658 689 True 1079.0 1079 94.9280 1 688 1 chr6B.!!$R3 687
6 TraesCS2B01G488100 chr3B 539094392 539095079 687 True 1064.0 1064 94.6220 2 688 1 chr3B.!!$R1 686
7 TraesCS2B01G488100 chr3B 740512302 740512987 685 False 1026.0 1026 93.6050 1 688 1 chr3B.!!$F2 687
8 TraesCS2B01G488100 chr5A 593102730 593103417 687 False 1053.0 1053 94.3310 2 688 1 chr5A.!!$F1 686
9 TraesCS2B01G488100 chr3D 598480585 598481253 668 True 1053.0 1053 95.0750 19 688 1 chr3D.!!$R1 669
10 TraesCS2B01G488100 chr4A 514739984 514740674 690 False 1046.0 1046 94.0670 1 688 1 chr4A.!!$F1 687
11 TraesCS2B01G488100 chr7B 559672358 559673044 686 True 1042.0 1042 94.0490 2 688 1 chr7B.!!$R2 686
12 TraesCS2B01G488100 chr7B 132181233 132181911 678 True 780.0 780 87.3730 1 688 1 chr7B.!!$R1 687
13 TraesCS2B01G488100 chr7B 57677605 57678229 624 False 750.0 750 88.3570 64 688 1 chr7B.!!$F1 624
14 TraesCS2B01G488100 chr7B 586243426 586244120 694 False 712.0 712 85.4700 1 688 1 chr7B.!!$F4 687
15 TraesCS2B01G488100 chr6D 123974268 123974954 686 False 1037.0 1037 93.8950 1 688 1 chr6D.!!$F3 687
16 TraesCS2B01G488100 chr6D 306880081 306880769 688 True 939.0 939 91.3040 1 688 1 chr6D.!!$R2 687
17 TraesCS2B01G488100 chr7A 87449225 87449915 690 False 1029.0 1029 93.6320 1 688 1 chr7A.!!$F1 687
18 TraesCS2B01G488100 chr1B 604712051 604712738 687 True 1011.0 1011 93.1690 1 688 1 chr1B.!!$R2 687
19 TraesCS2B01G488100 chr1B 604665186 604665873 687 True 989.0 989 92.5870 1 688 1 chr1B.!!$R1 687
20 TraesCS2B01G488100 chr2D 435329504 435330191 687 False 961.0 961 91.8720 1 688 1 chr2D.!!$F1 687
21 TraesCS2B01G488100 chr1D 400177627 400178311 684 True 907.0 907 90.5800 1 688 1 chr1D.!!$R1 687
22 TraesCS2B01G488100 chr1D 15035164 15035848 684 False 564.0 564 81.5670 2 688 1 chr1D.!!$F1 686
23 TraesCS2B01G488100 chr7D 133425841 133426528 687 True 894.0 894 90.1450 1 688 1 chr7D.!!$R1 687
24 TraesCS2B01G488100 chr1A 554973454 554974142 688 True 889.0 889 90.0140 1 688 1 chr1A.!!$R2 687
25 TraesCS2B01G488100 chr1A 440418229 440418916 687 True 854.0 854 89.1150 3 688 1 chr1A.!!$R1 685
26 TraesCS2B01G488100 chr2A 711021000 711021984 984 False 543.5 883 85.2120 718 1804 2 chr2A.!!$F2 1086

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
942 1000 0.17668 CCTTCACCATCTCCGACCTG 59.823 60.0 0.0 0.0 0.0 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1937 2020 0.322098 TCCCAAGTGCATGTTACCGG 60.322 55.0 0.0 0.0 0.0 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 51 2.025887 GGTGAGGATGGATTTGGTGAGT 60.026 50.000 0.00 0.00 0.00 3.41
53 55 2.649312 AGGATGGATTTGGTGAGTTCCA 59.351 45.455 0.00 0.00 42.18 3.53
154 156 2.034221 GAGCCCCTTCACCACCAC 59.966 66.667 0.00 0.00 0.00 4.16
317 323 1.305201 GCTTTGTGGGTTCTTCGTCA 58.695 50.000 0.00 0.00 0.00 4.35
324 330 1.371558 GGTTCTTCGTCAGCCAGGT 59.628 57.895 0.00 0.00 0.00 4.00
422 428 3.803082 CGTGGGCGGCAACATCAG 61.803 66.667 17.67 0.00 0.00 2.90
518 524 1.526575 GGGTGTCGGTTCTGGTCGTA 61.527 60.000 0.00 0.00 0.00 3.43
654 679 0.324738 TGGTTGTTTGGGCAACAGGA 60.325 50.000 10.48 0.00 46.37 3.86
750 778 9.142515 CTTTGTTTAAGCAATAAAGCATCATGA 57.857 29.630 5.52 0.00 36.95 3.07
751 779 9.656040 TTTGTTTAAGCAATAAAGCATCATGAT 57.344 25.926 1.18 1.18 34.21 2.45
754 782 4.761235 AGCAATAAAGCATCATGATCCG 57.239 40.909 4.86 0.00 36.85 4.18
832 872 1.469335 TTCGGTTCGGCTCTGGTTCT 61.469 55.000 0.00 0.00 0.00 3.01
833 873 1.738099 CGGTTCGGCTCTGGTTCTG 60.738 63.158 0.00 0.00 0.00 3.02
845 885 2.322830 GGTTCTGGTTCGGTTCGGC 61.323 63.158 0.00 0.00 0.00 5.54
846 886 1.301479 GTTCTGGTTCGGTTCGGCT 60.301 57.895 0.00 0.00 0.00 5.52
870 910 1.351350 GGTTCTTGGGGCTGTAGAAGT 59.649 52.381 0.00 0.00 0.00 3.01
872 912 2.024176 TCTTGGGGCTGTAGAAGTCA 57.976 50.000 0.00 0.00 29.21 3.41
873 913 2.551270 TCTTGGGGCTGTAGAAGTCAT 58.449 47.619 0.00 0.00 29.21 3.06
875 915 1.656587 TGGGGCTGTAGAAGTCATGT 58.343 50.000 0.00 0.00 29.21 3.21
876 916 1.278985 TGGGGCTGTAGAAGTCATGTG 59.721 52.381 0.00 0.00 29.21 3.21
879 919 2.005451 GGCTGTAGAAGTCATGTGCTG 58.995 52.381 0.00 0.00 0.00 4.41
881 921 3.529533 GCTGTAGAAGTCATGTGCTGAT 58.470 45.455 0.00 0.00 35.97 2.90
887 945 1.022982 AGTCATGTGCTGATGTGCCG 61.023 55.000 0.00 0.00 35.97 5.69
892 950 1.154150 GTGCTGATGTGCCGCTTTC 60.154 57.895 0.00 0.00 0.00 2.62
913 971 1.980052 CGTCTAAAGTCTGGGGCCA 59.020 57.895 4.39 0.00 0.00 5.36
928 986 3.465210 TGGGGCCATGTATAAATCCTTCA 59.535 43.478 4.39 0.00 0.00 3.02
939 997 2.990066 AATCCTTCACCATCTCCGAC 57.010 50.000 0.00 0.00 0.00 4.79
942 1000 0.176680 CCTTCACCATCTCCGACCTG 59.823 60.000 0.00 0.00 0.00 4.00
977 1035 1.351076 AACCCATTTCCCCAGCAAAG 58.649 50.000 0.00 0.00 0.00 2.77
1009 1067 1.978580 AGAGACGAACAATGGGGTTCT 59.021 47.619 0.00 0.00 43.87 3.01
1029 1087 2.666098 GGCCGCCTTCTGGAACCTA 61.666 63.158 0.71 0.00 34.57 3.08
1032 1090 0.613777 CCGCCTTCTGGAACCTACTT 59.386 55.000 0.00 0.00 34.57 2.24
1049 1107 2.270297 CTTGCCTTGATTTCCGCCGG 62.270 60.000 0.00 0.00 0.00 6.13
1059 1117 0.107410 TTTCCGCCGGATGTAGCAAT 60.107 50.000 6.69 0.00 0.00 3.56
1197 1255 3.865745 CCTTCTTCTTGTACTACGGCATG 59.134 47.826 0.00 0.00 0.00 4.06
1257 1315 4.410400 GGCTTCTGGGTGTCGGGG 62.410 72.222 0.00 0.00 0.00 5.73
1258 1316 3.319198 GCTTCTGGGTGTCGGGGA 61.319 66.667 0.00 0.00 0.00 4.81
1264 1322 2.750237 GGGTGTCGGGGAATGTGC 60.750 66.667 0.00 0.00 0.00 4.57
1265 1323 3.124921 GGTGTCGGGGAATGTGCG 61.125 66.667 0.00 0.00 0.00 5.34
1273 1331 3.554692 GGAATGTGCGCGGACGAG 61.555 66.667 25.71 0.00 43.93 4.18
1348 1406 2.863153 CGCTTGGAGGCTTTGTCG 59.137 61.111 0.00 0.00 0.00 4.35
1390 1454 1.010797 CTGCGTCAGTTGTGTGTGC 60.011 57.895 0.00 0.00 0.00 4.57
1461 1525 4.004982 GCTTCCACCTGTTATCCGTTTTA 58.995 43.478 0.00 0.00 0.00 1.52
1462 1526 4.142752 GCTTCCACCTGTTATCCGTTTTAC 60.143 45.833 0.00 0.00 0.00 2.01
1463 1527 4.895668 TCCACCTGTTATCCGTTTTACT 57.104 40.909 0.00 0.00 0.00 2.24
1464 1528 4.824289 TCCACCTGTTATCCGTTTTACTC 58.176 43.478 0.00 0.00 0.00 2.59
1465 1529 3.937079 CCACCTGTTATCCGTTTTACTCC 59.063 47.826 0.00 0.00 0.00 3.85
1466 1530 4.323257 CCACCTGTTATCCGTTTTACTCCT 60.323 45.833 0.00 0.00 0.00 3.69
1467 1531 5.243207 CACCTGTTATCCGTTTTACTCCTT 58.757 41.667 0.00 0.00 0.00 3.36
1468 1532 5.350640 CACCTGTTATCCGTTTTACTCCTTC 59.649 44.000 0.00 0.00 0.00 3.46
1469 1533 4.874396 CCTGTTATCCGTTTTACTCCTTCC 59.126 45.833 0.00 0.00 0.00 3.46
1470 1534 4.497300 TGTTATCCGTTTTACTCCTTCCG 58.503 43.478 0.00 0.00 0.00 4.30
1471 1535 4.021192 TGTTATCCGTTTTACTCCTTCCGT 60.021 41.667 0.00 0.00 0.00 4.69
1472 1536 3.690475 ATCCGTTTTACTCCTTCCGTT 57.310 42.857 0.00 0.00 0.00 4.44
1473 1537 3.030668 TCCGTTTTACTCCTTCCGTTC 57.969 47.619 0.00 0.00 0.00 3.95
1474 1538 2.071540 CCGTTTTACTCCTTCCGTTCC 58.928 52.381 0.00 0.00 0.00 3.62
1475 1539 2.548493 CCGTTTTACTCCTTCCGTTCCA 60.548 50.000 0.00 0.00 0.00 3.53
1476 1540 3.132925 CGTTTTACTCCTTCCGTTCCAA 58.867 45.455 0.00 0.00 0.00 3.53
1477 1541 3.560896 CGTTTTACTCCTTCCGTTCCAAA 59.439 43.478 0.00 0.00 0.00 3.28
1478 1542 4.035441 CGTTTTACTCCTTCCGTTCCAAAA 59.965 41.667 0.00 0.00 0.00 2.44
1479 1543 5.278120 CGTTTTACTCCTTCCGTTCCAAAAT 60.278 40.000 0.00 0.00 0.00 1.82
1480 1544 6.073112 CGTTTTACTCCTTCCGTTCCAAAATA 60.073 38.462 0.00 0.00 0.00 1.40
1481 1545 7.303261 GTTTTACTCCTTCCGTTCCAAAATAG 58.697 38.462 0.00 0.00 0.00 1.73
1482 1546 4.903045 ACTCCTTCCGTTCCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
1483 1547 5.437191 ACTCCTTCCGTTCCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
1484 1548 5.186198 ACTCCTTCCGTTCCAAAATAGATG 58.814 41.667 0.00 0.00 0.00 2.90
1485 1549 5.045869 ACTCCTTCCGTTCCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
1486 1550 5.183228 TCCTTCCGTTCCAAAATAGATGAC 58.817 41.667 0.00 0.00 0.00 3.06
1487 1551 4.335594 CCTTCCGTTCCAAAATAGATGACC 59.664 45.833 0.00 0.00 0.00 4.02
1488 1552 3.881220 TCCGTTCCAAAATAGATGACCC 58.119 45.455 0.00 0.00 0.00 4.46
1489 1553 3.264706 TCCGTTCCAAAATAGATGACCCA 59.735 43.478 0.00 0.00 0.00 4.51
1490 1554 4.013728 CCGTTCCAAAATAGATGACCCAA 58.986 43.478 0.00 0.00 0.00 4.12
1491 1555 4.142469 CCGTTCCAAAATAGATGACCCAAC 60.142 45.833 0.00 0.00 0.00 3.77
1492 1556 4.700213 CGTTCCAAAATAGATGACCCAACT 59.300 41.667 0.00 0.00 0.00 3.16
1493 1557 5.183140 CGTTCCAAAATAGATGACCCAACTT 59.817 40.000 0.00 0.00 0.00 2.66
1494 1558 6.294508 CGTTCCAAAATAGATGACCCAACTTT 60.295 38.462 0.00 0.00 0.00 2.66
1495 1559 6.588719 TCCAAAATAGATGACCCAACTTTG 57.411 37.500 0.00 0.00 0.00 2.77
1496 1560 6.074648 TCCAAAATAGATGACCCAACTTTGT 58.925 36.000 0.00 0.00 0.00 2.83
1497 1561 7.235079 TCCAAAATAGATGACCCAACTTTGTA 58.765 34.615 0.00 0.00 0.00 2.41
1498 1562 7.175990 TCCAAAATAGATGACCCAACTTTGTAC 59.824 37.037 0.00 0.00 0.00 2.90
1499 1563 7.176690 CCAAAATAGATGACCCAACTTTGTACT 59.823 37.037 0.00 0.00 0.00 2.73
1500 1564 9.226606 CAAAATAGATGACCCAACTTTGTACTA 57.773 33.333 0.00 0.00 0.00 1.82
1501 1565 9.802039 AAAATAGATGACCCAACTTTGTACTAA 57.198 29.630 0.00 0.00 0.00 2.24
1502 1566 9.802039 AAATAGATGACCCAACTTTGTACTAAA 57.198 29.630 0.00 0.00 0.00 1.85
1503 1567 9.449719 AATAGATGACCCAACTTTGTACTAAAG 57.550 33.333 13.08 13.08 0.00 1.85
1504 1568 6.838382 AGATGACCCAACTTTGTACTAAAGT 58.162 36.000 14.04 14.04 41.82 2.66
1506 1570 8.434392 AGATGACCCAACTTTGTACTAAAGTTA 58.566 33.333 23.56 14.79 45.57 2.24
1507 1571 8.617290 ATGACCCAACTTTGTACTAAAGTTAG 57.383 34.615 23.56 20.79 45.57 2.34
1508 1572 7.567458 TGACCCAACTTTGTACTAAAGTTAGT 58.433 34.615 23.56 22.58 45.57 2.24
1509 1573 8.703743 TGACCCAACTTTGTACTAAAGTTAGTA 58.296 33.333 23.56 6.81 45.57 1.82
1510 1574 9.716531 GACCCAACTTTGTACTAAAGTTAGTAT 57.283 33.333 23.56 15.20 45.57 2.12
1536 1600 8.970691 AAAATTGAGTCATCTATTTTGGAACG 57.029 30.769 11.47 0.00 44.08 3.95
1537 1601 6.683974 ATTGAGTCATCTATTTTGGAACGG 57.316 37.500 0.00 0.00 0.00 4.44
1538 1602 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
1539 1603 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
1540 1604 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
1541 1605 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1567 1631 0.961019 TGTTTGTGGCAATGAGGCTC 59.039 50.000 7.79 7.79 44.55 4.70
1572 1636 3.153369 TGTGGCAATGAGGCTCTTTTA 57.847 42.857 16.72 0.00 44.55 1.52
1573 1637 3.700538 TGTGGCAATGAGGCTCTTTTAT 58.299 40.909 16.72 0.00 44.55 1.40
1574 1638 3.444742 TGTGGCAATGAGGCTCTTTTATG 59.555 43.478 16.72 6.16 44.55 1.90
1677 1754 0.320073 TCTGCCTTGTTACGAACGGG 60.320 55.000 0.00 0.00 0.00 5.28
1764 1847 3.963428 ACGACTGCCTTTCTTCAGTAT 57.037 42.857 0.00 0.00 42.97 2.12
1845 1928 3.561725 AGAAAACGCCTTGAGTTCTTGAG 59.438 43.478 0.00 0.00 0.00 3.02
1849 1932 1.597742 GCCTTGAGTTCTTGAGTGCA 58.402 50.000 0.00 0.00 0.00 4.57
1862 1945 0.232303 GAGTGCACGTGGAAAGTTCG 59.768 55.000 18.88 0.00 0.00 3.95
1863 1946 0.461339 AGTGCACGTGGAAAGTTCGT 60.461 50.000 18.88 0.00 38.34 3.85
1864 1947 0.375803 GTGCACGTGGAAAGTTCGTT 59.624 50.000 18.88 0.00 35.62 3.85
1865 1948 0.375454 TGCACGTGGAAAGTTCGTTG 59.625 50.000 18.88 0.00 35.62 4.10
1866 1949 0.928451 GCACGTGGAAAGTTCGTTGC 60.928 55.000 18.88 0.00 35.62 4.17
1867 1950 0.316689 CACGTGGAAAGTTCGTTGCC 60.317 55.000 7.95 0.00 35.62 4.52
1868 1951 1.281656 CGTGGAAAGTTCGTTGCCC 59.718 57.895 0.00 0.00 0.00 5.36
1869 1952 1.164041 CGTGGAAAGTTCGTTGCCCT 61.164 55.000 0.00 0.00 0.00 5.19
1870 1953 1.874739 CGTGGAAAGTTCGTTGCCCTA 60.875 52.381 0.00 0.00 0.00 3.53
1871 1954 2.433436 GTGGAAAGTTCGTTGCCCTAT 58.567 47.619 0.00 0.00 0.00 2.57
1872 1955 3.602483 GTGGAAAGTTCGTTGCCCTATA 58.398 45.455 0.00 0.00 0.00 1.31
1873 1956 3.373130 GTGGAAAGTTCGTTGCCCTATAC 59.627 47.826 0.00 0.00 0.00 1.47
1874 1957 2.941064 GGAAAGTTCGTTGCCCTATACC 59.059 50.000 0.00 0.00 0.00 2.73
1875 1958 3.370209 GGAAAGTTCGTTGCCCTATACCT 60.370 47.826 0.00 0.00 0.00 3.08
1876 1959 3.538634 AAGTTCGTTGCCCTATACCTC 57.461 47.619 0.00 0.00 0.00 3.85
1877 1960 2.463752 AGTTCGTTGCCCTATACCTCA 58.536 47.619 0.00 0.00 0.00 3.86
1878 1961 2.431057 AGTTCGTTGCCCTATACCTCAG 59.569 50.000 0.00 0.00 0.00 3.35
1879 1962 2.154567 TCGTTGCCCTATACCTCAGT 57.845 50.000 0.00 0.00 0.00 3.41
1880 1963 2.463752 TCGTTGCCCTATACCTCAGTT 58.536 47.619 0.00 0.00 0.00 3.16
1881 1964 2.835764 TCGTTGCCCTATACCTCAGTTT 59.164 45.455 0.00 0.00 0.00 2.66
1882 1965 3.118884 TCGTTGCCCTATACCTCAGTTTC 60.119 47.826 0.00 0.00 0.00 2.78
1883 1966 3.542648 GTTGCCCTATACCTCAGTTTCC 58.457 50.000 0.00 0.00 0.00 3.13
1884 1967 2.124411 TGCCCTATACCTCAGTTTCCC 58.876 52.381 0.00 0.00 0.00 3.97
1885 1968 2.293586 TGCCCTATACCTCAGTTTCCCT 60.294 50.000 0.00 0.00 0.00 4.20
1886 1969 3.051650 TGCCCTATACCTCAGTTTCCCTA 60.052 47.826 0.00 0.00 0.00 3.53
1887 1970 3.971971 GCCCTATACCTCAGTTTCCCTAA 59.028 47.826 0.00 0.00 0.00 2.69
1888 1971 4.411212 GCCCTATACCTCAGTTTCCCTAAA 59.589 45.833 0.00 0.00 0.00 1.85
1889 1972 5.104235 GCCCTATACCTCAGTTTCCCTAAAA 60.104 44.000 0.00 0.00 0.00 1.52
1890 1973 6.579647 GCCCTATACCTCAGTTTCCCTAAAAA 60.580 42.308 0.00 0.00 0.00 1.94
1912 1995 3.790089 AACCTGGGTGAAGTTCTAAGG 57.210 47.619 4.17 8.03 0.00 2.69
1913 1996 1.351350 ACCTGGGTGAAGTTCTAAGGC 59.649 52.381 4.17 0.00 0.00 4.35
1914 1997 1.630878 CCTGGGTGAAGTTCTAAGGCT 59.369 52.381 4.17 0.00 0.00 4.58
1915 1998 2.616510 CCTGGGTGAAGTTCTAAGGCTG 60.617 54.545 4.17 0.00 0.00 4.85
1916 1999 1.351017 TGGGTGAAGTTCTAAGGCTGG 59.649 52.381 4.17 0.00 0.00 4.85
1917 2000 1.454201 GGTGAAGTTCTAAGGCTGGC 58.546 55.000 4.17 0.00 0.00 4.85
1918 2001 1.003696 GGTGAAGTTCTAAGGCTGGCT 59.996 52.381 4.17 0.00 0.00 4.75
1919 2002 2.236395 GGTGAAGTTCTAAGGCTGGCTA 59.764 50.000 3.41 0.00 0.00 3.93
1920 2003 3.118223 GGTGAAGTTCTAAGGCTGGCTAT 60.118 47.826 3.41 0.00 0.00 2.97
1921 2004 4.101119 GGTGAAGTTCTAAGGCTGGCTATA 59.899 45.833 3.41 0.00 0.00 1.31
1922 2005 5.293560 GTGAAGTTCTAAGGCTGGCTATAG 58.706 45.833 3.41 8.80 0.00 1.31
1923 2006 4.962995 TGAAGTTCTAAGGCTGGCTATAGT 59.037 41.667 3.41 0.00 0.00 2.12
1924 2007 4.946478 AGTTCTAAGGCTGGCTATAGTG 57.054 45.455 3.41 0.00 0.00 2.74
1925 2008 3.643792 AGTTCTAAGGCTGGCTATAGTGG 59.356 47.826 3.41 0.00 0.00 4.00
1926 2009 2.609747 TCTAAGGCTGGCTATAGTGGG 58.390 52.381 3.41 0.00 0.00 4.61
1927 2010 1.625818 CTAAGGCTGGCTATAGTGGGG 59.374 57.143 3.41 0.00 0.00 4.96
1928 2011 1.062488 AAGGCTGGCTATAGTGGGGG 61.062 60.000 3.41 0.00 0.00 5.40
1929 2012 1.770518 GGCTGGCTATAGTGGGGGT 60.771 63.158 0.84 0.00 0.00 4.95
1930 2013 0.473117 GGCTGGCTATAGTGGGGGTA 60.473 60.000 0.84 0.00 0.00 3.69
1931 2014 1.430992 GCTGGCTATAGTGGGGGTAA 58.569 55.000 0.84 0.00 0.00 2.85
1932 2015 1.071857 GCTGGCTATAGTGGGGGTAAC 59.928 57.143 0.84 0.00 0.00 2.50
1933 2016 2.404559 CTGGCTATAGTGGGGGTAACA 58.595 52.381 0.84 0.00 39.74 2.41
1934 2017 2.979678 CTGGCTATAGTGGGGGTAACAT 59.020 50.000 0.84 0.00 39.74 2.71
1935 2018 4.164981 CTGGCTATAGTGGGGGTAACATA 58.835 47.826 0.84 0.00 39.74 2.29
1936 2019 4.568879 TGGCTATAGTGGGGGTAACATAA 58.431 43.478 0.84 0.00 39.74 1.90
1937 2020 4.348754 TGGCTATAGTGGGGGTAACATAAC 59.651 45.833 0.84 0.00 39.74 1.89
1938 2021 4.263199 GGCTATAGTGGGGGTAACATAACC 60.263 50.000 0.84 0.00 38.94 2.85
1939 2022 4.562143 GCTATAGTGGGGGTAACATAACCG 60.562 50.000 0.84 0.00 40.73 4.44
1940 2023 0.913924 AGTGGGGGTAACATAACCGG 59.086 55.000 0.00 0.00 40.73 5.28
1941 2024 0.620030 GTGGGGGTAACATAACCGGT 59.380 55.000 0.00 0.00 40.73 5.28
1942 2025 1.836802 GTGGGGGTAACATAACCGGTA 59.163 52.381 8.00 0.00 40.73 4.02
1943 2026 2.238395 GTGGGGGTAACATAACCGGTAA 59.762 50.000 8.00 0.00 40.73 2.85
1944 2027 2.238395 TGGGGGTAACATAACCGGTAAC 59.762 50.000 8.00 0.00 40.73 2.50
1945 2028 2.238395 GGGGGTAACATAACCGGTAACA 59.762 50.000 8.00 0.00 40.73 2.41
1946 2029 3.117926 GGGGGTAACATAACCGGTAACAT 60.118 47.826 8.00 0.00 40.73 2.71
1947 2030 3.878699 GGGGTAACATAACCGGTAACATG 59.121 47.826 8.00 14.59 40.73 3.21
1948 2031 3.313249 GGGTAACATAACCGGTAACATGC 59.687 47.826 8.00 0.00 40.73 4.06
1949 2032 3.940221 GGTAACATAACCGGTAACATGCA 59.060 43.478 8.00 1.25 0.00 3.96
1950 2033 4.201841 GGTAACATAACCGGTAACATGCAC 60.202 45.833 8.00 12.73 0.00 4.57
1951 2034 3.343941 ACATAACCGGTAACATGCACT 57.656 42.857 8.00 0.00 0.00 4.40
1952 2035 3.681593 ACATAACCGGTAACATGCACTT 58.318 40.909 8.00 0.00 0.00 3.16
1953 2036 3.438781 ACATAACCGGTAACATGCACTTG 59.561 43.478 8.00 0.00 0.00 3.16
1954 2037 1.243902 AACCGGTAACATGCACTTGG 58.756 50.000 8.00 0.86 0.00 3.61
1955 2038 0.608035 ACCGGTAACATGCACTTGGG 60.608 55.000 4.49 0.00 0.00 4.12
1956 2039 0.322098 CCGGTAACATGCACTTGGGA 60.322 55.000 0.00 0.00 0.00 4.37
1957 2040 0.802494 CGGTAACATGCACTTGGGAC 59.198 55.000 0.00 0.00 0.00 4.46
1958 2041 1.610624 CGGTAACATGCACTTGGGACT 60.611 52.381 0.00 0.00 0.00 3.85
1959 2042 2.354303 CGGTAACATGCACTTGGGACTA 60.354 50.000 0.00 0.00 0.00 2.59
1960 2043 3.270877 GGTAACATGCACTTGGGACTAG 58.729 50.000 0.00 0.00 0.00 2.57
1961 2044 1.826385 AACATGCACTTGGGACTAGC 58.174 50.000 0.00 0.00 0.00 3.42
1962 2045 0.692476 ACATGCACTTGGGACTAGCA 59.308 50.000 0.00 0.00 39.79 3.49
1963 2046 1.073763 ACATGCACTTGGGACTAGCAA 59.926 47.619 0.00 0.00 38.85 3.91
1964 2047 2.161855 CATGCACTTGGGACTAGCAAA 58.838 47.619 0.00 0.00 38.85 3.68
1965 2048 1.604604 TGCACTTGGGACTAGCAAAC 58.395 50.000 0.00 0.00 31.42 2.93
1966 2049 1.133945 TGCACTTGGGACTAGCAAACA 60.134 47.619 0.00 0.00 31.42 2.83
1967 2050 2.162681 GCACTTGGGACTAGCAAACAT 58.837 47.619 0.00 0.00 0.00 2.71
1968 2051 2.095059 GCACTTGGGACTAGCAAACATG 60.095 50.000 0.00 0.00 0.00 3.21
1969 2052 2.095059 CACTTGGGACTAGCAAACATGC 60.095 50.000 0.00 0.00 0.00 4.06
1971 2054 2.584835 TGGGACTAGCAAACATGCTT 57.415 45.000 8.79 0.00 43.52 3.91
1972 2055 3.712016 TGGGACTAGCAAACATGCTTA 57.288 42.857 8.79 0.00 43.52 3.09
1973 2056 4.235079 TGGGACTAGCAAACATGCTTAT 57.765 40.909 8.79 0.00 43.52 1.73
1974 2057 3.947196 TGGGACTAGCAAACATGCTTATG 59.053 43.478 8.79 3.17 43.52 1.90
1975 2058 3.947834 GGGACTAGCAAACATGCTTATGT 59.052 43.478 8.79 6.15 43.52 2.29
1976 2059 4.201950 GGGACTAGCAAACATGCTTATGTG 60.202 45.833 8.79 0.00 43.52 3.21
1977 2060 4.635765 GGACTAGCAAACATGCTTATGTGA 59.364 41.667 8.79 0.00 43.52 3.58
1978 2061 5.447818 GGACTAGCAAACATGCTTATGTGAC 60.448 44.000 8.79 0.00 43.52 3.67
1979 2062 5.003160 ACTAGCAAACATGCTTATGTGACA 58.997 37.500 8.79 0.00 43.52 3.58
1980 2063 4.164822 AGCAAACATGCTTATGTGACAC 57.835 40.909 0.00 0.00 43.52 3.67
1981 2064 3.569277 AGCAAACATGCTTATGTGACACA 59.431 39.130 11.41 11.41 43.52 3.72
1982 2065 3.670055 GCAAACATGCTTATGTGACACAC 59.330 43.478 11.22 0.00 34.56 3.82
1983 2066 6.947562 AGCAAACATGCTTATGTGACACACA 61.948 40.000 11.22 4.67 44.97 3.72
1984 2067 8.342470 AGCAAACATGCTTATGTGACACACAA 62.342 38.462 11.22 4.50 44.44 3.33
1985 2068 9.555303 AGCAAACATGCTTATGTGACACACAAT 62.555 37.037 11.22 0.00 44.44 2.71
1997 2080 7.482654 TGTGACACACAATTAAAGAAGAGAG 57.517 36.000 3.56 0.00 41.69 3.20
1998 2081 7.272244 TGTGACACACAATTAAAGAAGAGAGA 58.728 34.615 3.56 0.00 41.69 3.10
1999 2082 7.439356 TGTGACACACAATTAAAGAAGAGAGAG 59.561 37.037 3.56 0.00 41.69 3.20
2000 2083 6.931281 TGACACACAATTAAAGAAGAGAGAGG 59.069 38.462 0.00 0.00 0.00 3.69
2001 2084 6.234177 ACACACAATTAAAGAAGAGAGAGGG 58.766 40.000 0.00 0.00 0.00 4.30
2002 2085 5.645497 CACACAATTAAAGAAGAGAGAGGGG 59.355 44.000 0.00 0.00 0.00 4.79
2003 2086 5.189180 CACAATTAAAGAAGAGAGAGGGGG 58.811 45.833 0.00 0.00 0.00 5.40
2004 2087 4.852697 ACAATTAAAGAAGAGAGAGGGGGT 59.147 41.667 0.00 0.00 0.00 4.95
2005 2088 5.313506 ACAATTAAAGAAGAGAGAGGGGGTT 59.686 40.000 0.00 0.00 0.00 4.11
2006 2089 6.504279 ACAATTAAAGAAGAGAGAGGGGGTTA 59.496 38.462 0.00 0.00 0.00 2.85
2007 2090 6.816616 ATTAAAGAAGAGAGAGGGGGTTAG 57.183 41.667 0.00 0.00 0.00 2.34
2008 2091 4.421574 AAAGAAGAGAGAGGGGGTTAGA 57.578 45.455 0.00 0.00 0.00 2.10
2009 2092 3.680777 AGAAGAGAGAGGGGGTTAGAG 57.319 52.381 0.00 0.00 0.00 2.43
2010 2093 2.930405 AGAAGAGAGAGGGGGTTAGAGT 59.070 50.000 0.00 0.00 0.00 3.24
2011 2094 4.120681 AGAAGAGAGAGGGGGTTAGAGTA 58.879 47.826 0.00 0.00 0.00 2.59
2012 2095 4.544968 AGAAGAGAGAGGGGGTTAGAGTAA 59.455 45.833 0.00 0.00 0.00 2.24
2013 2096 4.254039 AGAGAGAGGGGGTTAGAGTAAC 57.746 50.000 0.00 0.00 37.94 2.50
2014 2097 3.596956 AGAGAGAGGGGGTTAGAGTAACA 59.403 47.826 0.00 0.00 40.39 2.41
2015 2098 4.233287 AGAGAGAGGGGGTTAGAGTAACAT 59.767 45.833 0.00 0.00 40.39 2.71
2016 2099 5.435707 AGAGAGAGGGGGTTAGAGTAACATA 59.564 44.000 0.00 0.00 40.39 2.29
2017 2100 6.068379 AGAGAGAGGGGGTTAGAGTAACATAA 60.068 42.308 0.00 0.00 40.39 1.90
2018 2101 6.137559 AGAGAGGGGGTTAGAGTAACATAAG 58.862 44.000 0.00 0.00 40.39 1.73
2019 2102 5.851418 AGAGGGGGTTAGAGTAACATAAGT 58.149 41.667 0.00 0.00 40.39 2.24
2020 2103 6.989894 AGAGGGGGTTAGAGTAACATAAGTA 58.010 40.000 0.00 0.00 40.39 2.24
2021 2104 7.068061 AGAGGGGGTTAGAGTAACATAAGTAG 58.932 42.308 0.00 0.00 40.39 2.57
2022 2105 6.989894 AGGGGGTTAGAGTAACATAAGTAGA 58.010 40.000 0.00 0.00 40.39 2.59
2023 2106 7.602868 AGGGGGTTAGAGTAACATAAGTAGAT 58.397 38.462 0.00 0.00 40.39 1.98
2024 2107 8.740512 AGGGGGTTAGAGTAACATAAGTAGATA 58.259 37.037 0.00 0.00 40.39 1.98
2025 2108 8.801299 GGGGGTTAGAGTAACATAAGTAGATAC 58.199 40.741 0.00 0.00 40.39 2.24
2026 2109 8.801299 GGGGTTAGAGTAACATAAGTAGATACC 58.199 40.741 0.00 0.00 40.39 2.73
2027 2110 8.510505 GGGTTAGAGTAACATAAGTAGATACCG 58.489 40.741 0.00 0.00 40.39 4.02
2028 2111 9.061435 GGTTAGAGTAACATAAGTAGATACCGT 57.939 37.037 0.00 0.00 40.39 4.83
2048 2131 9.890629 ATACCGTATCATGTTAAATGATATGCT 57.109 29.630 15.70 7.91 42.42 3.79
2050 2133 9.151471 ACCGTATCATGTTAAATGATATGCTAC 57.849 33.333 15.70 3.09 42.42 3.58
2051 2134 9.371136 CCGTATCATGTTAAATGATATGCTACT 57.629 33.333 15.70 0.00 42.42 2.57
2059 2142 9.225436 TGTTAAATGATATGCTACTTTGTGTCA 57.775 29.630 0.00 0.00 0.00 3.58
2062 2145 5.739752 TGATATGCTACTTTGTGTCATGC 57.260 39.130 0.00 0.00 0.00 4.06
2063 2146 5.184711 TGATATGCTACTTTGTGTCATGCA 58.815 37.500 0.00 0.00 35.34 3.96
2064 2147 5.824097 TGATATGCTACTTTGTGTCATGCAT 59.176 36.000 0.00 0.00 40.50 3.96
2065 2148 3.835378 TGCTACTTTGTGTCATGCATG 57.165 42.857 21.07 21.07 0.00 4.06
2066 2149 2.488937 TGCTACTTTGTGTCATGCATGG 59.511 45.455 25.97 10.76 0.00 3.66
2067 2150 2.733227 GCTACTTTGTGTCATGCATGGC 60.733 50.000 24.40 24.40 0.00 4.40
2068 2151 1.330234 ACTTTGTGTCATGCATGGCA 58.670 45.000 29.45 29.45 44.86 4.92
2069 2152 1.687660 ACTTTGTGTCATGCATGGCAA 59.312 42.857 34.01 25.74 44.94 4.52
2070 2153 2.300723 ACTTTGTGTCATGCATGGCAAT 59.699 40.909 34.01 15.19 44.94 3.56
2071 2154 3.510753 ACTTTGTGTCATGCATGGCAATA 59.489 39.130 34.01 22.99 44.94 1.90
2072 2155 4.021280 ACTTTGTGTCATGCATGGCAATAA 60.021 37.500 34.01 26.82 44.94 1.40
2073 2156 4.532314 TTGTGTCATGCATGGCAATAAA 57.468 36.364 34.01 24.20 44.94 1.40
2074 2157 4.739587 TGTGTCATGCATGGCAATAAAT 57.260 36.364 34.01 0.00 44.94 1.40
2075 2158 5.848833 TGTGTCATGCATGGCAATAAATA 57.151 34.783 34.01 14.13 44.94 1.40
2076 2159 6.408107 TGTGTCATGCATGGCAATAAATAT 57.592 33.333 34.01 0.00 44.94 1.28
2077 2160 6.217294 TGTGTCATGCATGGCAATAAATATG 58.783 36.000 34.01 1.77 44.94 1.78
2078 2161 6.040616 TGTGTCATGCATGGCAATAAATATGA 59.959 34.615 34.01 6.03 44.94 2.15
2079 2162 6.364165 GTGTCATGCATGGCAATAAATATGAC 59.636 38.462 34.01 17.09 44.94 3.06
2080 2163 5.865552 GTCATGCATGGCAATAAATATGACC 59.134 40.000 26.04 0.00 43.62 4.02
2081 2164 5.539193 TCATGCATGGCAATAAATATGACCA 59.461 36.000 25.97 0.00 43.62 4.02
2082 2165 5.199024 TGCATGGCAATAAATATGACCAC 57.801 39.130 0.00 0.00 34.76 4.16
2083 2166 4.039004 TGCATGGCAATAAATATGACCACC 59.961 41.667 0.00 0.00 34.76 4.61
2084 2167 4.281688 GCATGGCAATAAATATGACCACCT 59.718 41.667 0.00 0.00 30.51 4.00
2085 2168 5.476599 GCATGGCAATAAATATGACCACCTA 59.523 40.000 0.00 0.00 30.51 3.08
2086 2169 6.153340 GCATGGCAATAAATATGACCACCTAT 59.847 38.462 0.00 0.00 30.51 2.57
2087 2170 7.541162 CATGGCAATAAATATGACCACCTATG 58.459 38.462 0.00 0.00 30.51 2.23
2088 2171 6.846988 TGGCAATAAATATGACCACCTATGA 58.153 36.000 0.00 0.00 0.00 2.15
2089 2172 7.293828 TGGCAATAAATATGACCACCTATGAA 58.706 34.615 0.00 0.00 0.00 2.57
2090 2173 7.782168 TGGCAATAAATATGACCACCTATGAAA 59.218 33.333 0.00 0.00 0.00 2.69
2091 2174 8.082242 GGCAATAAATATGACCACCTATGAAAC 58.918 37.037 0.00 0.00 0.00 2.78
2092 2175 8.850156 GCAATAAATATGACCACCTATGAAACT 58.150 33.333 0.00 0.00 0.00 2.66
2097 2180 9.975218 AAATATGACCACCTATGAAACTACTTT 57.025 29.630 0.00 0.00 0.00 2.66
2100 2183 8.964476 ATGACCACCTATGAAACTACTTTATG 57.036 34.615 0.00 0.00 0.00 1.90
2101 2184 8.141298 TGACCACCTATGAAACTACTTTATGA 57.859 34.615 0.00 0.00 0.00 2.15
2102 2185 8.768397 TGACCACCTATGAAACTACTTTATGAT 58.232 33.333 0.00 0.00 0.00 2.45
2119 2202 9.935241 ACTTTATGATACTATGCACTATGAAGG 57.065 33.333 0.00 0.00 0.00 3.46
2120 2203 9.935241 CTTTATGATACTATGCACTATGAAGGT 57.065 33.333 0.00 0.00 0.00 3.50
2124 2207 9.755122 ATGATACTATGCACTATGAAGGTACTA 57.245 33.333 0.00 0.00 38.49 1.82
2125 2208 9.755122 TGATACTATGCACTATGAAGGTACTAT 57.245 33.333 0.00 0.00 38.49 2.12
2127 2210 9.755122 ATACTATGCACTATGAAGGTACTATCA 57.245 33.333 0.00 4.08 38.49 2.15
2128 2211 8.657387 ACTATGCACTATGAAGGTACTATCAT 57.343 34.615 15.12 15.12 38.49 2.45
2129 2212 9.755122 ACTATGCACTATGAAGGTACTATCATA 57.245 33.333 15.57 15.57 38.49 2.15
2131 2214 7.833285 TGCACTATGAAGGTACTATCATACA 57.167 36.000 13.61 9.71 38.49 2.29
2132 2215 7.658261 TGCACTATGAAGGTACTATCATACAC 58.342 38.462 13.61 8.85 38.49 2.90
2133 2216 7.505923 TGCACTATGAAGGTACTATCATACACT 59.494 37.037 13.61 0.00 38.49 3.55
2134 2217 9.011095 GCACTATGAAGGTACTATCATACACTA 57.989 37.037 13.61 1.24 38.49 2.74
2169 2252 9.355916 TGCATGATACTAGTATATGATACTCCC 57.644 37.037 22.89 9.00 0.00 4.30
2170 2253 8.798402 GCATGATACTAGTATATGATACTCCCC 58.202 40.741 22.89 8.64 0.00 4.81
2171 2254 9.868160 CATGATACTAGTATATGATACTCCCCA 57.132 37.037 15.42 5.35 0.00 4.96
2172 2255 9.869667 ATGATACTAGTATATGATACTCCCCAC 57.130 37.037 15.42 0.00 0.00 4.61
2173 2256 9.070210 TGATACTAGTATATGATACTCCCCACT 57.930 37.037 15.42 0.00 0.00 4.00
2177 2260 9.070210 ACTAGTATATGATACTCCCCACTATGA 57.930 37.037 0.00 0.00 0.00 2.15
2178 2261 9.344772 CTAGTATATGATACTCCCCACTATGAC 57.655 40.741 2.44 0.00 0.00 3.06
2179 2262 7.945278 AGTATATGATACTCCCCACTATGACT 58.055 38.462 0.00 0.00 0.00 3.41
2180 2263 9.070210 AGTATATGATACTCCCCACTATGACTA 57.930 37.037 0.00 0.00 0.00 2.59
2181 2264 9.344772 GTATATGATACTCCCCACTATGACTAG 57.655 40.741 0.00 0.00 0.00 2.57
2182 2265 5.664815 TGATACTCCCCACTATGACTAGT 57.335 43.478 0.00 0.00 38.79 2.57
2183 2266 5.632118 TGATACTCCCCACTATGACTAGTC 58.368 45.833 16.32 16.32 35.99 2.59
2184 2267 5.372959 TGATACTCCCCACTATGACTAGTCT 59.627 44.000 23.01 11.45 35.99 3.24
2185 2268 6.561454 TGATACTCCCCACTATGACTAGTCTA 59.439 42.308 23.01 10.48 35.99 2.59
2186 2269 5.728937 ACTCCCCACTATGACTAGTCTAA 57.271 43.478 23.01 10.46 35.99 2.10
2187 2270 5.697067 ACTCCCCACTATGACTAGTCTAAG 58.303 45.833 23.01 20.18 35.99 2.18
2188 2271 5.432390 ACTCCCCACTATGACTAGTCTAAGA 59.568 44.000 23.01 3.72 35.99 2.10
2189 2272 5.692928 TCCCCACTATGACTAGTCTAAGAC 58.307 45.833 23.01 0.00 35.99 3.01
2190 2273 5.432390 TCCCCACTATGACTAGTCTAAGACT 59.568 44.000 23.01 0.00 45.54 3.24
2191 2274 6.618610 TCCCCACTATGACTAGTCTAAGACTA 59.381 42.308 23.01 1.82 41.51 2.59
2201 2284 4.744795 AGTCTAAGACTAGCCACAATGG 57.255 45.455 0.00 0.00 41.51 3.16
2202 2285 4.097418 AGTCTAAGACTAGCCACAATGGT 58.903 43.478 0.00 0.00 41.51 3.55
2203 2286 4.160626 AGTCTAAGACTAGCCACAATGGTC 59.839 45.833 0.00 0.00 41.51 4.02
2204 2287 4.081642 GTCTAAGACTAGCCACAATGGTCA 60.082 45.833 0.00 0.00 40.46 4.02
2205 2288 3.340814 AAGACTAGCCACAATGGTCAG 57.659 47.619 0.00 0.00 40.46 3.51
2206 2289 2.260822 AGACTAGCCACAATGGTCAGT 58.739 47.619 0.00 0.40 40.46 3.41
2207 2290 3.441101 AGACTAGCCACAATGGTCAGTA 58.559 45.455 0.00 0.00 40.46 2.74
2208 2291 3.838317 AGACTAGCCACAATGGTCAGTAA 59.162 43.478 0.00 0.00 40.46 2.24
2209 2292 3.933332 GACTAGCCACAATGGTCAGTAAC 59.067 47.826 0.00 0.00 40.46 2.50
2210 2293 2.949177 AGCCACAATGGTCAGTAACA 57.051 45.000 0.00 0.00 40.46 2.41
2211 2294 3.439857 AGCCACAATGGTCAGTAACAT 57.560 42.857 0.00 0.00 40.46 2.71
2212 2295 4.568072 AGCCACAATGGTCAGTAACATA 57.432 40.909 0.00 0.00 40.46 2.29
2213 2296 4.261801 AGCCACAATGGTCAGTAACATAC 58.738 43.478 0.00 0.00 40.46 2.39
2214 2297 4.006989 GCCACAATGGTCAGTAACATACA 58.993 43.478 0.00 0.00 40.46 2.29
2215 2298 4.142687 GCCACAATGGTCAGTAACATACAC 60.143 45.833 0.00 0.00 40.46 2.90
2216 2299 5.245531 CCACAATGGTCAGTAACATACACT 58.754 41.667 0.00 0.00 31.35 3.55
2217 2300 6.403049 CCACAATGGTCAGTAACATACACTA 58.597 40.000 0.00 0.00 31.35 2.74
2218 2301 6.535150 CCACAATGGTCAGTAACATACACTAG 59.465 42.308 0.00 0.00 31.35 2.57
2219 2302 7.097192 CACAATGGTCAGTAACATACACTAGT 58.903 38.462 0.00 0.00 0.00 2.57
2220 2303 8.248253 CACAATGGTCAGTAACATACACTAGTA 58.752 37.037 0.00 0.00 34.10 1.82
2221 2304 8.809066 ACAATGGTCAGTAACATACACTAGTAA 58.191 33.333 0.00 0.00 33.13 2.24
2222 2305 9.084164 CAATGGTCAGTAACATACACTAGTAAC 57.916 37.037 0.00 0.00 33.13 2.50
2223 2306 7.764141 TGGTCAGTAACATACACTAGTAACA 57.236 36.000 0.00 0.00 33.13 2.41
2224 2307 8.357290 TGGTCAGTAACATACACTAGTAACAT 57.643 34.615 0.00 0.00 33.13 2.71
2225 2308 9.465199 TGGTCAGTAACATACACTAGTAACATA 57.535 33.333 0.00 0.00 33.13 2.29
2226 2309 9.727627 GGTCAGTAACATACACTAGTAACATAC 57.272 37.037 0.00 0.00 33.13 2.39
2235 2318 9.856488 CATACACTAGTAACATACACATATCCC 57.144 37.037 0.00 0.00 33.13 3.85
2236 2319 9.824216 ATACACTAGTAACATACACATATCCCT 57.176 33.333 0.00 0.00 33.13 4.20
2238 2321 9.298250 ACACTAGTAACATACACATATCCCTAG 57.702 37.037 0.00 0.00 0.00 3.02
2239 2322 9.516546 CACTAGTAACATACACATATCCCTAGA 57.483 37.037 0.00 0.00 0.00 2.43
2240 2323 9.517868 ACTAGTAACATACACATATCCCTAGAC 57.482 37.037 0.00 0.00 0.00 2.59
2241 2324 9.742144 CTAGTAACATACACATATCCCTAGACT 57.258 37.037 0.00 0.00 0.00 3.24
2245 2328 8.958060 AACATACACATATCCCTAGACTATGT 57.042 34.615 0.00 0.00 36.72 2.29
2246 2329 8.958060 ACATACACATATCCCTAGACTATGTT 57.042 34.615 8.30 5.15 34.66 2.71
2280 2363 8.683615 TCATAGTGAGTAGTAACATAAGTGTGG 58.316 37.037 0.00 0.00 38.92 4.17
2281 2364 6.912951 AGTGAGTAGTAACATAAGTGTGGT 57.087 37.500 0.00 0.00 38.92 4.16
2282 2365 9.690913 ATAGTGAGTAGTAACATAAGTGTGGTA 57.309 33.333 0.00 0.00 38.92 3.25
2283 2366 8.413309 AGTGAGTAGTAACATAAGTGTGGTAA 57.587 34.615 0.00 0.00 38.92 2.85
2284 2367 8.302438 AGTGAGTAGTAACATAAGTGTGGTAAC 58.698 37.037 0.00 0.00 38.92 2.50
2329 2412 7.661040 AGTTATAAACTCATATTGCATTGGGC 58.339 34.615 0.00 0.00 37.02 5.36
2330 2413 7.287466 AGTTATAAACTCATATTGCATTGGGCA 59.713 33.333 0.00 0.00 45.12 5.36
2341 2424 3.738830 GCATTGGGCATGTGATGTTAT 57.261 42.857 0.00 0.00 43.97 1.89
2342 2425 4.852134 GCATTGGGCATGTGATGTTATA 57.148 40.909 0.00 0.00 43.97 0.98
2343 2426 4.801891 GCATTGGGCATGTGATGTTATAG 58.198 43.478 0.00 0.00 43.97 1.31
2344 2427 4.279169 GCATTGGGCATGTGATGTTATAGT 59.721 41.667 0.00 0.00 43.97 2.12
2345 2428 5.473162 GCATTGGGCATGTGATGTTATAGTA 59.527 40.000 0.00 0.00 43.97 1.82
2346 2429 6.016360 GCATTGGGCATGTGATGTTATAGTAA 60.016 38.462 0.00 0.00 43.97 2.24
2347 2430 6.935741 TTGGGCATGTGATGTTATAGTAAC 57.064 37.500 0.00 0.00 0.00 2.50
2348 2431 6.247229 TGGGCATGTGATGTTATAGTAACT 57.753 37.500 0.00 0.00 0.00 2.24
2349 2432 7.368198 TGGGCATGTGATGTTATAGTAACTA 57.632 36.000 0.00 0.00 0.00 2.24
2350 2433 7.441836 TGGGCATGTGATGTTATAGTAACTAG 58.558 38.462 0.00 0.00 0.00 2.57
2351 2434 6.369065 GGGCATGTGATGTTATAGTAACTAGC 59.631 42.308 0.00 0.00 0.00 3.42
2352 2435 7.155328 GGCATGTGATGTTATAGTAACTAGCT 58.845 38.462 0.00 0.00 0.00 3.32
2353 2436 8.304596 GGCATGTGATGTTATAGTAACTAGCTA 58.695 37.037 0.00 0.00 0.00 3.32
2354 2437 9.692749 GCATGTGATGTTATAGTAACTAGCTAA 57.307 33.333 0.00 0.00 0.00 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
154 156 4.180946 CCGAGACCGAGGCGACAG 62.181 72.222 0.00 0.00 38.22 3.51
495 501 2.357034 CAGAACCGACACCCCACG 60.357 66.667 0.00 0.00 0.00 4.94
500 506 0.529378 ATACGACCAGAACCGACACC 59.471 55.000 0.00 0.00 0.00 4.16
654 679 1.031029 GTCCCTAACGAGCCGACTCT 61.031 60.000 0.00 0.00 41.09 3.24
694 719 3.665060 GCGTATGGCGTCGTTAACTTTTT 60.665 43.478 3.71 0.00 43.66 1.94
695 720 2.159801 GCGTATGGCGTCGTTAACTTTT 60.160 45.455 3.71 0.00 43.66 2.27
696 721 1.391144 GCGTATGGCGTCGTTAACTTT 59.609 47.619 3.71 0.00 43.66 2.66
697 722 0.994263 GCGTATGGCGTCGTTAACTT 59.006 50.000 3.71 0.00 43.66 2.66
749 777 1.666189 GCTGTAAGGCTTGAACGGATC 59.334 52.381 10.69 0.00 0.00 3.36
750 778 1.003118 TGCTGTAAGGCTTGAACGGAT 59.997 47.619 10.69 0.00 0.00 4.18
751 779 0.394938 TGCTGTAAGGCTTGAACGGA 59.605 50.000 10.69 0.00 0.00 4.69
754 782 1.135286 GCCATGCTGTAAGGCTTGAAC 60.135 52.381 10.69 1.06 44.92 3.18
832 872 2.342279 CAGAGCCGAACCGAACCA 59.658 61.111 0.00 0.00 0.00 3.67
833 873 2.434359 CCAGAGCCGAACCGAACC 60.434 66.667 0.00 0.00 0.00 3.62
845 885 1.001641 CAGCCCCAAGAACCCAGAG 60.002 63.158 0.00 0.00 0.00 3.35
846 886 0.474854 TACAGCCCCAAGAACCCAGA 60.475 55.000 0.00 0.00 0.00 3.86
870 910 2.400962 GCGGCACATCAGCACATGA 61.401 57.895 0.00 0.00 43.70 3.07
872 912 1.246056 AAAGCGGCACATCAGCACAT 61.246 50.000 1.45 0.00 38.40 3.21
873 913 1.855213 GAAAGCGGCACATCAGCACA 61.855 55.000 1.45 0.00 38.40 4.57
875 915 2.334946 GGAAAGCGGCACATCAGCA 61.335 57.895 1.45 0.00 38.40 4.41
876 916 2.486966 GGAAAGCGGCACATCAGC 59.513 61.111 1.45 0.00 36.06 4.26
887 945 1.390463 CAGACTTTAGACGCGGAAAGC 59.610 52.381 22.49 17.03 43.95 3.51
892 950 1.153628 CCCCAGACTTTAGACGCGG 60.154 63.158 12.47 0.00 0.00 6.46
913 971 6.270000 TCGGAGATGGTGAAGGATTTATACAT 59.730 38.462 0.00 0.00 0.00 2.29
928 986 1.553704 GGTTTACAGGTCGGAGATGGT 59.446 52.381 0.00 0.00 40.67 3.55
939 997 4.440940 GGGTTTGTGTTTGAGGTTTACAGG 60.441 45.833 0.00 0.00 0.00 4.00
942 1000 4.722361 TGGGTTTGTGTTTGAGGTTTAC 57.278 40.909 0.00 0.00 0.00 2.01
977 1035 1.004918 CGTCTCTTGGGTGGTGGTC 60.005 63.158 0.00 0.00 0.00 4.02
1009 1067 2.282180 GTTCCAGAAGGCGGCCAA 60.282 61.111 23.09 1.98 33.74 4.52
1029 1087 1.586154 CGGCGGAAATCAAGGCAAGT 61.586 55.000 0.00 0.00 0.00 3.16
1032 1090 2.550699 ATCCGGCGGAAATCAAGGCA 62.551 55.000 34.58 5.80 34.34 4.75
1049 1107 1.262683 GCTTCTCCGCATTGCTACATC 59.737 52.381 7.12 0.00 0.00 3.06
1257 1315 3.554692 CCTCGTCCGCGCACATTC 61.555 66.667 8.75 0.00 38.14 2.67
1258 1316 4.373116 ACCTCGTCCGCGCACATT 62.373 61.111 8.75 0.00 38.14 2.71
1461 1525 4.903045 TCTATTTTGGAACGGAAGGAGT 57.097 40.909 0.00 0.00 0.00 3.85
1462 1526 5.294552 GTCATCTATTTTGGAACGGAAGGAG 59.705 44.000 0.00 0.00 0.00 3.69
1463 1527 5.183228 GTCATCTATTTTGGAACGGAAGGA 58.817 41.667 0.00 0.00 0.00 3.36
1464 1528 4.335594 GGTCATCTATTTTGGAACGGAAGG 59.664 45.833 0.00 0.00 0.00 3.46
1465 1529 4.335594 GGGTCATCTATTTTGGAACGGAAG 59.664 45.833 0.00 0.00 0.00 3.46
1466 1530 4.263550 TGGGTCATCTATTTTGGAACGGAA 60.264 41.667 0.00 0.00 0.00 4.30
1467 1531 3.264706 TGGGTCATCTATTTTGGAACGGA 59.735 43.478 0.00 0.00 0.00 4.69
1468 1532 3.616219 TGGGTCATCTATTTTGGAACGG 58.384 45.455 0.00 0.00 0.00 4.44
1469 1533 4.700213 AGTTGGGTCATCTATTTTGGAACG 59.300 41.667 0.00 0.00 0.00 3.95
1470 1534 6.590234 AAGTTGGGTCATCTATTTTGGAAC 57.410 37.500 0.00 0.00 0.00 3.62
1471 1535 6.553100 ACAAAGTTGGGTCATCTATTTTGGAA 59.447 34.615 0.00 0.00 0.00 3.53
1472 1536 6.074648 ACAAAGTTGGGTCATCTATTTTGGA 58.925 36.000 0.00 0.00 0.00 3.53
1473 1537 6.345096 ACAAAGTTGGGTCATCTATTTTGG 57.655 37.500 0.00 0.00 0.00 3.28
1474 1538 8.110860 AGTACAAAGTTGGGTCATCTATTTTG 57.889 34.615 0.00 0.00 0.00 2.44
1475 1539 9.802039 TTAGTACAAAGTTGGGTCATCTATTTT 57.198 29.630 0.00 0.00 0.00 1.82
1476 1540 9.802039 TTTAGTACAAAGTTGGGTCATCTATTT 57.198 29.630 0.00 0.00 0.00 1.40
1477 1541 9.449719 CTTTAGTACAAAGTTGGGTCATCTATT 57.550 33.333 0.00 0.00 0.00 1.73
1478 1542 8.603304 ACTTTAGTACAAAGTTGGGTCATCTAT 58.397 33.333 14.04 0.00 37.18 1.98
1479 1543 7.970102 ACTTTAGTACAAAGTTGGGTCATCTA 58.030 34.615 14.04 0.00 37.18 1.98
1480 1544 6.838382 ACTTTAGTACAAAGTTGGGTCATCT 58.162 36.000 14.04 0.00 37.18 2.90
1481 1545 7.506328 AACTTTAGTACAAAGTTGGGTCATC 57.494 36.000 23.48 0.00 45.58 2.92
1482 1546 8.215736 ACTAACTTTAGTACAAAGTTGGGTCAT 58.784 33.333 28.62 17.19 46.38 3.06
1483 1547 7.567458 ACTAACTTTAGTACAAAGTTGGGTCA 58.433 34.615 28.62 17.50 46.38 4.02
1484 1548 9.716531 ATACTAACTTTAGTACAAAGTTGGGTC 57.283 33.333 28.62 0.00 46.38 4.46
1511 1575 8.028938 CCGTTCCAAAATAGATGACTCAATTTT 58.971 33.333 0.00 0.00 33.07 1.82
1512 1576 7.393234 TCCGTTCCAAAATAGATGACTCAATTT 59.607 33.333 0.00 0.00 0.00 1.82
1513 1577 6.884295 TCCGTTCCAAAATAGATGACTCAATT 59.116 34.615 0.00 0.00 0.00 2.32
1514 1578 6.414732 TCCGTTCCAAAATAGATGACTCAAT 58.585 36.000 0.00 0.00 0.00 2.57
1515 1579 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
1516 1580 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
1517 1581 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
1518 1582 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
1519 1583 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
1520 1584 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1521 1585 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
1522 1586 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
1523 1587 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1524 1588 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1525 1589 6.328148 ACATATACTCCCTCCGTTCCAAAATA 59.672 38.462 0.00 0.00 0.00 1.40
1526 1590 5.132144 ACATATACTCCCTCCGTTCCAAAAT 59.868 40.000 0.00 0.00 0.00 1.82
1527 1591 4.472108 ACATATACTCCCTCCGTTCCAAAA 59.528 41.667 0.00 0.00 0.00 2.44
1528 1592 4.035112 ACATATACTCCCTCCGTTCCAAA 58.965 43.478 0.00 0.00 0.00 3.28
1529 1593 3.649843 ACATATACTCCCTCCGTTCCAA 58.350 45.455 0.00 0.00 0.00 3.53
1530 1594 3.323774 ACATATACTCCCTCCGTTCCA 57.676 47.619 0.00 0.00 0.00 3.53
1531 1595 4.141779 ACAAACATATACTCCCTCCGTTCC 60.142 45.833 0.00 0.00 0.00 3.62
1532 1596 4.809426 CACAAACATATACTCCCTCCGTTC 59.191 45.833 0.00 0.00 0.00 3.95
1533 1597 4.383770 CCACAAACATATACTCCCTCCGTT 60.384 45.833 0.00 0.00 0.00 4.44
1534 1598 3.134081 CCACAAACATATACTCCCTCCGT 59.866 47.826 0.00 0.00 0.00 4.69
1535 1599 3.728845 CCACAAACATATACTCCCTCCG 58.271 50.000 0.00 0.00 0.00 4.63
1536 1600 3.118038 TGCCACAAACATATACTCCCTCC 60.118 47.826 0.00 0.00 0.00 4.30
1537 1601 4.150897 TGCCACAAACATATACTCCCTC 57.849 45.455 0.00 0.00 0.00 4.30
1538 1602 4.584638 TTGCCACAAACATATACTCCCT 57.415 40.909 0.00 0.00 0.00 4.20
1539 1603 4.887071 TCATTGCCACAAACATATACTCCC 59.113 41.667 0.00 0.00 0.00 4.30
1540 1604 5.009010 CCTCATTGCCACAAACATATACTCC 59.991 44.000 0.00 0.00 0.00 3.85
1541 1605 5.506317 GCCTCATTGCCACAAACATATACTC 60.506 44.000 0.00 0.00 0.00 2.59
1595 1660 4.204012 CCCTGAAACTCTGTTACCAACAA 58.796 43.478 0.00 0.00 41.61 2.83
1617 1689 0.674895 ACATCGAAAGCAGGGCAGAC 60.675 55.000 0.00 0.00 0.00 3.51
1677 1754 3.121778 GCCAAAATGCAACAGACGAATTC 59.878 43.478 0.00 0.00 0.00 2.17
1764 1847 0.528901 CGTATGAATTGCCCGGACGA 60.529 55.000 0.73 0.00 0.00 4.20
1822 1905 3.560068 TCAAGAACTCAAGGCGTTTTCTC 59.440 43.478 5.34 0.00 0.00 2.87
1845 1928 0.375803 AACGAACTTTCCACGTGCAC 59.624 50.000 10.91 6.82 40.10 4.57
1849 1932 1.441732 GGGCAACGAACTTTCCACGT 61.442 55.000 0.00 0.00 41.97 4.49
1862 1945 3.542648 GGAAACTGAGGTATAGGGCAAC 58.457 50.000 0.00 0.00 0.00 4.17
1863 1946 2.508300 GGGAAACTGAGGTATAGGGCAA 59.492 50.000 0.00 0.00 0.00 4.52
1864 1947 2.124411 GGGAAACTGAGGTATAGGGCA 58.876 52.381 0.00 0.00 0.00 5.36
1865 1948 2.409570 AGGGAAACTGAGGTATAGGGC 58.590 52.381 0.00 0.00 0.00 5.19
1866 1949 6.570654 TTTTAGGGAAACTGAGGTATAGGG 57.429 41.667 0.00 0.00 0.00 3.53
1889 1972 4.893524 CCTTAGAACTTCACCCAGGTTTTT 59.106 41.667 0.00 0.00 0.00 1.94
1890 1973 4.470602 CCTTAGAACTTCACCCAGGTTTT 58.529 43.478 0.00 0.00 0.00 2.43
1891 1974 3.750922 GCCTTAGAACTTCACCCAGGTTT 60.751 47.826 0.00 0.00 0.00 3.27
1892 1975 2.224793 GCCTTAGAACTTCACCCAGGTT 60.225 50.000 0.00 0.00 0.00 3.50
1893 1976 1.351350 GCCTTAGAACTTCACCCAGGT 59.649 52.381 0.00 0.00 0.00 4.00
1894 1977 1.630878 AGCCTTAGAACTTCACCCAGG 59.369 52.381 0.00 0.00 0.00 4.45
1895 1978 2.616510 CCAGCCTTAGAACTTCACCCAG 60.617 54.545 0.00 0.00 0.00 4.45
1896 1979 1.351017 CCAGCCTTAGAACTTCACCCA 59.649 52.381 0.00 0.00 0.00 4.51
1897 1980 1.950954 GCCAGCCTTAGAACTTCACCC 60.951 57.143 0.00 0.00 0.00 4.61
1898 1981 1.003696 AGCCAGCCTTAGAACTTCACC 59.996 52.381 0.00 0.00 0.00 4.02
1899 1982 2.481289 AGCCAGCCTTAGAACTTCAC 57.519 50.000 0.00 0.00 0.00 3.18
1900 1983 4.962995 ACTATAGCCAGCCTTAGAACTTCA 59.037 41.667 0.00 0.00 0.00 3.02
1901 1984 5.293560 CACTATAGCCAGCCTTAGAACTTC 58.706 45.833 0.00 0.00 0.00 3.01
1902 1985 4.101741 CCACTATAGCCAGCCTTAGAACTT 59.898 45.833 0.00 0.00 0.00 2.66
1903 1986 3.643792 CCACTATAGCCAGCCTTAGAACT 59.356 47.826 0.00 0.00 0.00 3.01
1904 1987 3.244249 CCCACTATAGCCAGCCTTAGAAC 60.244 52.174 0.00 0.00 0.00 3.01
1905 1988 2.972713 CCCACTATAGCCAGCCTTAGAA 59.027 50.000 0.00 0.00 0.00 2.10
1906 1989 2.609747 CCCACTATAGCCAGCCTTAGA 58.390 52.381 0.00 0.00 0.00 2.10
1907 1990 1.625818 CCCCACTATAGCCAGCCTTAG 59.374 57.143 0.00 0.00 0.00 2.18
1908 1991 1.729586 CCCCACTATAGCCAGCCTTA 58.270 55.000 0.00 0.00 0.00 2.69
1909 1992 1.062488 CCCCCACTATAGCCAGCCTT 61.062 60.000 0.00 0.00 0.00 4.35
1910 1993 1.462238 CCCCCACTATAGCCAGCCT 60.462 63.158 0.00 0.00 0.00 4.58
1911 1994 0.473117 TACCCCCACTATAGCCAGCC 60.473 60.000 0.00 0.00 0.00 4.85
1912 1995 1.071857 GTTACCCCCACTATAGCCAGC 59.928 57.143 0.00 0.00 0.00 4.85
1913 1996 2.404559 TGTTACCCCCACTATAGCCAG 58.595 52.381 0.00 0.00 0.00 4.85
1914 1997 2.572229 TGTTACCCCCACTATAGCCA 57.428 50.000 0.00 0.00 0.00 4.75
1915 1998 4.263199 GGTTATGTTACCCCCACTATAGCC 60.263 50.000 0.00 0.00 31.71 3.93
1916 1999 4.562143 CGGTTATGTTACCCCCACTATAGC 60.562 50.000 0.00 0.00 34.56 2.97
1917 2000 4.020839 CCGGTTATGTTACCCCCACTATAG 60.021 50.000 0.00 0.00 34.56 1.31
1918 2001 3.903090 CCGGTTATGTTACCCCCACTATA 59.097 47.826 0.00 0.00 34.56 1.31
1919 2002 2.707257 CCGGTTATGTTACCCCCACTAT 59.293 50.000 0.00 0.00 34.56 2.12
1920 2003 2.117865 CCGGTTATGTTACCCCCACTA 58.882 52.381 0.00 0.00 34.56 2.74
1921 2004 0.913924 CCGGTTATGTTACCCCCACT 59.086 55.000 0.00 0.00 34.56 4.00
1922 2005 0.620030 ACCGGTTATGTTACCCCCAC 59.380 55.000 0.00 0.00 34.56 4.61
1923 2006 2.238395 GTTACCGGTTATGTTACCCCCA 59.762 50.000 15.04 0.00 34.56 4.96
1924 2007 2.238395 TGTTACCGGTTATGTTACCCCC 59.762 50.000 15.04 0.00 34.56 5.40
1925 2008 3.625649 TGTTACCGGTTATGTTACCCC 57.374 47.619 15.04 0.00 34.56 4.95
1926 2009 3.313249 GCATGTTACCGGTTATGTTACCC 59.687 47.826 15.04 0.00 34.56 3.69
1927 2010 3.940221 TGCATGTTACCGGTTATGTTACC 59.060 43.478 15.04 3.80 34.72 2.85
1928 2011 4.632688 AGTGCATGTTACCGGTTATGTTAC 59.367 41.667 15.04 16.83 0.00 2.50
1929 2012 4.834534 AGTGCATGTTACCGGTTATGTTA 58.165 39.130 15.04 6.77 0.00 2.41
1930 2013 3.681593 AGTGCATGTTACCGGTTATGTT 58.318 40.909 15.04 3.70 0.00 2.71
1931 2014 3.343941 AGTGCATGTTACCGGTTATGT 57.656 42.857 15.04 0.00 0.00 2.29
1932 2015 3.181501 CCAAGTGCATGTTACCGGTTATG 60.182 47.826 15.04 16.46 0.00 1.90
1933 2016 3.013921 CCAAGTGCATGTTACCGGTTAT 58.986 45.455 15.04 2.09 0.00 1.89
1934 2017 2.428491 CCAAGTGCATGTTACCGGTTA 58.572 47.619 15.04 0.00 0.00 2.85
1935 2018 1.243902 CCAAGTGCATGTTACCGGTT 58.756 50.000 15.04 0.00 0.00 4.44
1936 2019 0.608035 CCCAAGTGCATGTTACCGGT 60.608 55.000 13.98 13.98 0.00 5.28
1937 2020 0.322098 TCCCAAGTGCATGTTACCGG 60.322 55.000 0.00 0.00 0.00 5.28
1938 2021 0.802494 GTCCCAAGTGCATGTTACCG 59.198 55.000 0.00 0.00 0.00 4.02
1939 2022 2.200373 AGTCCCAAGTGCATGTTACC 57.800 50.000 0.00 0.00 0.00 2.85
1940 2023 2.678336 GCTAGTCCCAAGTGCATGTTAC 59.322 50.000 0.00 0.00 0.00 2.50
1941 2024 2.304470 TGCTAGTCCCAAGTGCATGTTA 59.696 45.455 0.00 0.00 0.00 2.41
1942 2025 1.073763 TGCTAGTCCCAAGTGCATGTT 59.926 47.619 0.00 0.00 0.00 2.71
1943 2026 0.692476 TGCTAGTCCCAAGTGCATGT 59.308 50.000 0.00 0.00 0.00 3.21
1944 2027 1.825090 TTGCTAGTCCCAAGTGCATG 58.175 50.000 0.00 0.00 33.50 4.06
1945 2028 2.162681 GTTTGCTAGTCCCAAGTGCAT 58.837 47.619 0.00 0.00 33.50 3.96
1946 2029 1.133945 TGTTTGCTAGTCCCAAGTGCA 60.134 47.619 0.00 0.00 0.00 4.57
1947 2030 1.604604 TGTTTGCTAGTCCCAAGTGC 58.395 50.000 0.00 0.00 0.00 4.40
1948 2031 2.095059 GCATGTTTGCTAGTCCCAAGTG 60.095 50.000 0.00 0.00 45.77 3.16
1949 2032 2.162681 GCATGTTTGCTAGTCCCAAGT 58.837 47.619 0.00 0.00 45.77 3.16
1950 2033 2.927553 GCATGTTTGCTAGTCCCAAG 57.072 50.000 0.00 0.00 45.77 3.61
1956 2039 9.372699 GTGTGTCACATAAGCATGTTTGCTAGT 62.373 40.741 9.31 0.00 45.30 2.57
1957 2040 7.107323 GTGTGTCACATAAGCATGTTTGCTAG 61.107 42.308 9.31 0.00 45.30 3.42
1958 2041 5.334802 GTGTGTCACATAAGCATGTTTGCTA 60.335 40.000 9.31 0.00 45.30 3.49
1959 2042 4.557296 GTGTGTCACATAAGCATGTTTGCT 60.557 41.667 9.31 0.00 46.69 3.91
1960 2043 3.670055 GTGTGTCACATAAGCATGTTTGC 59.330 43.478 9.31 0.00 42.98 3.68
1961 2044 4.857799 TGTGTGTCACATAAGCATGTTTG 58.142 39.130 9.31 0.00 42.98 2.93
1962 2045 5.512753 TTGTGTGTCACATAAGCATGTTT 57.487 34.783 9.31 0.00 42.98 2.83
1963 2046 5.710513 ATTGTGTGTCACATAAGCATGTT 57.289 34.783 18.42 0.62 42.98 2.71
1964 2047 5.710513 AATTGTGTGTCACATAAGCATGT 57.289 34.783 18.42 1.27 46.58 3.21
1965 2048 8.022550 TCTTTAATTGTGTGTCACATAAGCATG 58.977 33.333 18.42 9.10 44.16 4.06
1966 2049 8.109705 TCTTTAATTGTGTGTCACATAAGCAT 57.890 30.769 18.42 10.84 44.16 3.79
1967 2050 7.503521 TCTTTAATTGTGTGTCACATAAGCA 57.496 32.000 18.42 5.72 44.16 3.91
1968 2051 8.289618 TCTTCTTTAATTGTGTGTCACATAAGC 58.710 33.333 18.42 3.23 44.16 3.09
1969 2052 9.817365 CTCTTCTTTAATTGTGTGTCACATAAG 57.183 33.333 18.42 6.65 44.16 1.73
1970 2053 9.554395 TCTCTTCTTTAATTGTGTGTCACATAA 57.446 29.630 16.32 16.32 44.16 1.90
1971 2054 9.208022 CTCTCTTCTTTAATTGTGTGTCACATA 57.792 33.333 9.31 3.18 44.16 2.29
1972 2055 7.933577 TCTCTCTTCTTTAATTGTGTGTCACAT 59.066 33.333 9.31 0.00 44.16 3.21
1973 2056 7.272244 TCTCTCTTCTTTAATTGTGTGTCACA 58.728 34.615 0.18 0.18 43.02 3.58
1974 2057 7.095439 CCTCTCTCTTCTTTAATTGTGTGTCAC 60.095 40.741 0.00 0.00 34.56 3.67
1975 2058 6.931281 CCTCTCTCTTCTTTAATTGTGTGTCA 59.069 38.462 0.00 0.00 0.00 3.58
1976 2059 6.370166 CCCTCTCTCTTCTTTAATTGTGTGTC 59.630 42.308 0.00 0.00 0.00 3.67
1977 2060 6.234177 CCCTCTCTCTTCTTTAATTGTGTGT 58.766 40.000 0.00 0.00 0.00 3.72
1978 2061 5.645497 CCCCTCTCTCTTCTTTAATTGTGTG 59.355 44.000 0.00 0.00 0.00 3.82
1979 2062 5.280727 CCCCCTCTCTCTTCTTTAATTGTGT 60.281 44.000 0.00 0.00 0.00 3.72
1980 2063 5.189180 CCCCCTCTCTCTTCTTTAATTGTG 58.811 45.833 0.00 0.00 0.00 3.33
1981 2064 4.852697 ACCCCCTCTCTCTTCTTTAATTGT 59.147 41.667 0.00 0.00 0.00 2.71
1982 2065 5.443230 ACCCCCTCTCTCTTCTTTAATTG 57.557 43.478 0.00 0.00 0.00 2.32
1983 2066 6.966461 TCTAACCCCCTCTCTCTTCTTTAATT 59.034 38.462 0.00 0.00 0.00 1.40
1984 2067 6.513033 TCTAACCCCCTCTCTCTTCTTTAAT 58.487 40.000 0.00 0.00 0.00 1.40
1985 2068 5.912103 TCTAACCCCCTCTCTCTTCTTTAA 58.088 41.667 0.00 0.00 0.00 1.52
1986 2069 5.016459 ACTCTAACCCCCTCTCTCTTCTTTA 59.984 44.000 0.00 0.00 0.00 1.85
1987 2070 4.202847 ACTCTAACCCCCTCTCTCTTCTTT 60.203 45.833 0.00 0.00 0.00 2.52
1988 2071 3.338519 ACTCTAACCCCCTCTCTCTTCTT 59.661 47.826 0.00 0.00 0.00 2.52
1989 2072 2.930405 ACTCTAACCCCCTCTCTCTTCT 59.070 50.000 0.00 0.00 0.00 2.85
1990 2073 3.391799 ACTCTAACCCCCTCTCTCTTC 57.608 52.381 0.00 0.00 0.00 2.87
1991 2074 4.045590 TGTTACTCTAACCCCCTCTCTCTT 59.954 45.833 0.00 0.00 37.88 2.85
1992 2075 3.596956 TGTTACTCTAACCCCCTCTCTCT 59.403 47.826 0.00 0.00 37.88 3.10
1993 2076 3.978610 TGTTACTCTAACCCCCTCTCTC 58.021 50.000 0.00 0.00 37.88 3.20
1994 2077 4.628661 ATGTTACTCTAACCCCCTCTCT 57.371 45.455 0.00 0.00 37.88 3.10
1995 2078 5.898397 ACTTATGTTACTCTAACCCCCTCTC 59.102 44.000 0.00 0.00 37.88 3.20
1996 2079 5.851418 ACTTATGTTACTCTAACCCCCTCT 58.149 41.667 0.00 0.00 37.88 3.69
1997 2080 7.065504 TCTACTTATGTTACTCTAACCCCCTC 58.934 42.308 0.00 0.00 37.88 4.30
1998 2081 6.989894 TCTACTTATGTTACTCTAACCCCCT 58.010 40.000 0.00 0.00 37.88 4.79
1999 2082 7.852550 ATCTACTTATGTTACTCTAACCCCC 57.147 40.000 0.00 0.00 37.88 5.40
2000 2083 8.801299 GGTATCTACTTATGTTACTCTAACCCC 58.199 40.741 0.00 0.00 37.88 4.95
2001 2084 8.510505 CGGTATCTACTTATGTTACTCTAACCC 58.489 40.741 0.00 0.00 37.88 4.11
2002 2085 9.061435 ACGGTATCTACTTATGTTACTCTAACC 57.939 37.037 0.00 0.00 37.88 2.85
2022 2105 9.890629 AGCATATCATTTAACATGATACGGTAT 57.109 29.630 16.08 0.00 41.94 2.73
2024 2107 9.151471 GTAGCATATCATTTAACATGATACGGT 57.849 33.333 16.08 15.86 41.94 4.83
2025 2108 9.371136 AGTAGCATATCATTTAACATGATACGG 57.629 33.333 16.08 13.63 42.29 4.02
2033 2116 9.225436 TGACACAAAGTAGCATATCATTTAACA 57.775 29.630 0.00 0.00 0.00 2.41
2036 2119 8.344831 GCATGACACAAAGTAGCATATCATTTA 58.655 33.333 0.00 0.00 0.00 1.40
2037 2120 7.148035 TGCATGACACAAAGTAGCATATCATTT 60.148 33.333 0.00 0.00 30.65 2.32
2038 2121 6.319405 TGCATGACACAAAGTAGCATATCATT 59.681 34.615 0.00 0.00 30.65 2.57
2039 2122 5.824097 TGCATGACACAAAGTAGCATATCAT 59.176 36.000 0.00 0.00 30.65 2.45
2040 2123 5.184711 TGCATGACACAAAGTAGCATATCA 58.815 37.500 0.00 0.00 30.65 2.15
2041 2124 5.739752 TGCATGACACAAAGTAGCATATC 57.260 39.130 0.00 0.00 30.65 1.63
2042 2125 5.009310 CCATGCATGACACAAAGTAGCATAT 59.991 40.000 28.31 0.00 39.67 1.78
2043 2126 4.336153 CCATGCATGACACAAAGTAGCATA 59.664 41.667 28.31 0.00 39.67 3.14
2044 2127 3.129813 CCATGCATGACACAAAGTAGCAT 59.870 43.478 28.31 0.00 41.24 3.79
2045 2128 2.488937 CCATGCATGACACAAAGTAGCA 59.511 45.455 28.31 0.00 37.13 3.49
2046 2129 2.733227 GCCATGCATGACACAAAGTAGC 60.733 50.000 28.31 14.15 0.00 3.58
2047 2130 2.488937 TGCCATGCATGACACAAAGTAG 59.511 45.455 28.31 8.01 31.71 2.57
2048 2131 2.512705 TGCCATGCATGACACAAAGTA 58.487 42.857 28.31 5.91 31.71 2.24
2049 2132 1.330234 TGCCATGCATGACACAAAGT 58.670 45.000 28.31 0.00 31.71 2.66
2050 2133 2.442212 TTGCCATGCATGACACAAAG 57.558 45.000 28.31 10.23 38.76 2.77
2051 2134 4.532314 TTATTGCCATGCATGACACAAA 57.468 36.364 28.31 15.45 38.76 2.83
2052 2135 4.532314 TTTATTGCCATGCATGACACAA 57.468 36.364 28.31 25.14 38.76 3.33
2053 2136 4.739587 ATTTATTGCCATGCATGACACA 57.260 36.364 28.31 18.81 38.76 3.72
2054 2137 6.364165 GTCATATTTATTGCCATGCATGACAC 59.636 38.462 28.31 16.49 38.02 3.67
2055 2138 6.448852 GTCATATTTATTGCCATGCATGACA 58.551 36.000 28.31 20.53 38.02 3.58
2056 2139 5.865552 GGTCATATTTATTGCCATGCATGAC 59.134 40.000 28.31 17.77 38.76 3.06
2057 2140 5.539193 TGGTCATATTTATTGCCATGCATGA 59.461 36.000 28.31 8.76 38.76 3.07
2058 2141 5.636121 GTGGTCATATTTATTGCCATGCATG 59.364 40.000 20.19 20.19 38.76 4.06
2059 2142 5.279607 GGTGGTCATATTTATTGCCATGCAT 60.280 40.000 0.00 0.00 38.76 3.96
2060 2143 4.039004 GGTGGTCATATTTATTGCCATGCA 59.961 41.667 0.00 0.00 36.47 3.96
2061 2144 4.281688 AGGTGGTCATATTTATTGCCATGC 59.718 41.667 0.00 0.00 0.00 4.06
2062 2145 7.394077 TCATAGGTGGTCATATTTATTGCCATG 59.606 37.037 0.00 0.00 0.00 3.66
2063 2146 7.469343 TCATAGGTGGTCATATTTATTGCCAT 58.531 34.615 0.00 0.00 0.00 4.40
2064 2147 6.846988 TCATAGGTGGTCATATTTATTGCCA 58.153 36.000 0.00 0.00 0.00 4.92
2065 2148 7.759489 TTCATAGGTGGTCATATTTATTGCC 57.241 36.000 0.00 0.00 0.00 4.52
2066 2149 8.850156 AGTTTCATAGGTGGTCATATTTATTGC 58.150 33.333 0.00 0.00 0.00 3.56
2071 2154 9.975218 AAAGTAGTTTCATAGGTGGTCATATTT 57.025 29.630 0.00 0.00 0.00 1.40
2075 2158 8.768397 TCATAAAGTAGTTTCATAGGTGGTCAT 58.232 33.333 0.00 0.00 0.00 3.06
2076 2159 8.141298 TCATAAAGTAGTTTCATAGGTGGTCA 57.859 34.615 0.00 0.00 0.00 4.02
2093 2176 9.935241 CCTTCATAGTGCATAGTATCATAAAGT 57.065 33.333 0.00 0.00 0.00 2.66
2094 2177 9.935241 ACCTTCATAGTGCATAGTATCATAAAG 57.065 33.333 0.00 0.00 0.00 1.85
2097 2180 9.755122 AGTACCTTCATAGTGCATAGTATCATA 57.245 33.333 0.00 0.00 0.00 2.15
2098 2181 8.657387 AGTACCTTCATAGTGCATAGTATCAT 57.343 34.615 0.00 0.00 0.00 2.45
2099 2182 9.755122 ATAGTACCTTCATAGTGCATAGTATCA 57.245 33.333 0.00 0.00 0.00 2.15
2101 2184 9.755122 TGATAGTACCTTCATAGTGCATAGTAT 57.245 33.333 0.00 0.00 0.00 2.12
2102 2185 9.755122 ATGATAGTACCTTCATAGTGCATAGTA 57.245 33.333 6.40 0.00 30.93 1.82
2103 2186 8.657387 ATGATAGTACCTTCATAGTGCATAGT 57.343 34.615 6.40 0.00 30.93 2.12
2105 2188 9.528489 TGTATGATAGTACCTTCATAGTGCATA 57.472 33.333 13.07 0.00 35.94 3.14
2106 2189 8.307483 GTGTATGATAGTACCTTCATAGTGCAT 58.693 37.037 13.07 0.00 35.94 3.96
2107 2190 7.505923 AGTGTATGATAGTACCTTCATAGTGCA 59.494 37.037 13.07 7.52 35.94 4.57
2108 2191 7.887381 AGTGTATGATAGTACCTTCATAGTGC 58.113 38.462 13.07 8.28 35.94 4.40
2143 2226 9.355916 GGGAGTATCATATACTAGTATCATGCA 57.644 37.037 18.68 1.71 36.25 3.96
2144 2227 8.798402 GGGGAGTATCATATACTAGTATCATGC 58.202 40.741 18.68 12.34 36.25 4.06
2145 2228 9.868160 TGGGGAGTATCATATACTAGTATCATG 57.132 37.037 18.68 17.93 36.25 3.07
2146 2229 9.869667 GTGGGGAGTATCATATACTAGTATCAT 57.130 37.037 18.68 11.67 36.25 2.45
2147 2230 9.070210 AGTGGGGAGTATCATATACTAGTATCA 57.930 37.037 18.68 5.25 36.25 2.15
2151 2234 9.070210 TCATAGTGGGGAGTATCATATACTAGT 57.930 37.037 0.00 0.00 36.25 2.57
2152 2235 9.344772 GTCATAGTGGGGAGTATCATATACTAG 57.655 40.741 0.00 0.00 36.25 2.57
2153 2236 9.070210 AGTCATAGTGGGGAGTATCATATACTA 57.930 37.037 0.00 0.00 36.25 1.82
2154 2237 7.945278 AGTCATAGTGGGGAGTATCATATACT 58.055 38.462 0.00 0.00 36.25 2.12
2155 2238 9.344772 CTAGTCATAGTGGGGAGTATCATATAC 57.655 40.741 0.00 0.00 36.25 1.47
2156 2239 9.070210 ACTAGTCATAGTGGGGAGTATCATATA 57.930 37.037 0.00 0.00 40.84 0.86
2157 2240 7.945278 ACTAGTCATAGTGGGGAGTATCATAT 58.055 38.462 0.00 0.00 40.84 1.78
2158 2241 7.239984 AGACTAGTCATAGTGGGGAGTATCATA 59.760 40.741 24.44 0.00 42.46 2.15
2159 2242 6.046168 AGACTAGTCATAGTGGGGAGTATCAT 59.954 42.308 24.44 0.00 42.46 2.45
2160 2243 5.372959 AGACTAGTCATAGTGGGGAGTATCA 59.627 44.000 24.44 0.00 42.46 2.15
2161 2244 5.883180 AGACTAGTCATAGTGGGGAGTATC 58.117 45.833 24.44 0.00 42.46 2.24
2162 2245 5.933846 AGACTAGTCATAGTGGGGAGTAT 57.066 43.478 24.44 0.00 42.46 2.12
2163 2246 6.618610 TCTTAGACTAGTCATAGTGGGGAGTA 59.381 42.308 24.44 1.11 42.46 2.59
2164 2247 5.432390 TCTTAGACTAGTCATAGTGGGGAGT 59.568 44.000 24.44 2.07 42.46 3.85
2165 2248 5.766174 GTCTTAGACTAGTCATAGTGGGGAG 59.234 48.000 24.44 8.37 42.46 4.30
2166 2249 5.432390 AGTCTTAGACTAGTCATAGTGGGGA 59.568 44.000 24.44 8.07 42.46 4.81
2167 2250 5.697067 AGTCTTAGACTAGTCATAGTGGGG 58.303 45.833 24.44 6.07 42.46 4.96
2179 2262 5.269991 ACCATTGTGGCTAGTCTTAGACTA 58.730 41.667 19.51 19.51 42.67 2.59
2180 2263 4.097418 ACCATTGTGGCTAGTCTTAGACT 58.903 43.478 19.35 19.35 42.67 3.24
2181 2264 4.081642 TGACCATTGTGGCTAGTCTTAGAC 60.082 45.833 3.85 3.85 42.67 2.59
2182 2265 4.093743 TGACCATTGTGGCTAGTCTTAGA 58.906 43.478 0.00 0.00 42.67 2.10
2183 2266 4.081420 ACTGACCATTGTGGCTAGTCTTAG 60.081 45.833 0.00 0.00 42.67 2.18
2184 2267 3.838317 ACTGACCATTGTGGCTAGTCTTA 59.162 43.478 0.00 0.00 42.67 2.10
2185 2268 2.639839 ACTGACCATTGTGGCTAGTCTT 59.360 45.455 0.00 0.00 42.67 3.01
2186 2269 2.260822 ACTGACCATTGTGGCTAGTCT 58.739 47.619 0.00 0.00 42.67 3.24
2187 2270 2.770164 ACTGACCATTGTGGCTAGTC 57.230 50.000 0.00 0.00 42.67 2.59
2188 2271 3.326588 TGTTACTGACCATTGTGGCTAGT 59.673 43.478 9.64 9.64 42.67 2.57
2189 2272 3.937814 TGTTACTGACCATTGTGGCTAG 58.062 45.455 0.00 0.00 42.67 3.42
2190 2273 4.568072 ATGTTACTGACCATTGTGGCTA 57.432 40.909 0.00 0.00 42.67 3.93
2191 2274 2.949177 TGTTACTGACCATTGTGGCT 57.051 45.000 0.00 0.00 42.67 4.75
2192 2275 4.006989 TGTATGTTACTGACCATTGTGGC 58.993 43.478 0.00 0.00 42.67 5.01
2193 2276 5.245531 AGTGTATGTTACTGACCATTGTGG 58.754 41.667 0.00 0.00 45.02 4.17
2194 2277 7.097192 ACTAGTGTATGTTACTGACCATTGTG 58.903 38.462 0.00 0.00 0.00 3.33
2195 2278 7.241042 ACTAGTGTATGTTACTGACCATTGT 57.759 36.000 0.00 0.00 0.00 2.71
2196 2279 9.084164 GTTACTAGTGTATGTTACTGACCATTG 57.916 37.037 5.39 0.00 0.00 2.82
2197 2280 8.809066 TGTTACTAGTGTATGTTACTGACCATT 58.191 33.333 5.39 0.00 0.00 3.16
2198 2281 8.357290 TGTTACTAGTGTATGTTACTGACCAT 57.643 34.615 5.39 0.00 0.00 3.55
2199 2282 7.764141 TGTTACTAGTGTATGTTACTGACCA 57.236 36.000 5.39 0.00 0.00 4.02
2200 2283 9.727627 GTATGTTACTAGTGTATGTTACTGACC 57.272 37.037 5.39 0.00 0.00 4.02
2209 2292 9.856488 GGGATATGTGTATGTTACTAGTGTATG 57.144 37.037 5.39 0.00 0.00 2.39
2210 2293 9.824216 AGGGATATGTGTATGTTACTAGTGTAT 57.176 33.333 5.39 0.00 0.00 2.29
2212 2295 9.298250 CTAGGGATATGTGTATGTTACTAGTGT 57.702 37.037 5.39 0.00 0.00 3.55
2213 2296 9.516546 TCTAGGGATATGTGTATGTTACTAGTG 57.483 37.037 5.39 0.00 0.00 2.74
2214 2297 9.517868 GTCTAGGGATATGTGTATGTTACTAGT 57.482 37.037 0.00 0.00 0.00 2.57
2215 2298 9.742144 AGTCTAGGGATATGTGTATGTTACTAG 57.258 37.037 0.00 0.00 0.00 2.57
2220 2303 8.958060 ACATAGTCTAGGGATATGTGTATGTT 57.042 34.615 11.97 0.00 38.40 2.71
2221 2304 8.958060 AACATAGTCTAGGGATATGTGTATGT 57.042 34.615 12.94 0.00 39.46 2.29
2254 2337 8.683615 CCACACTTATGTTACTACTCACTATGA 58.316 37.037 0.00 0.00 36.72 2.15
2255 2338 8.467598 ACCACACTTATGTTACTACTCACTATG 58.532 37.037 0.00 0.00 36.72 2.23
2256 2339 8.591114 ACCACACTTATGTTACTACTCACTAT 57.409 34.615 0.00 0.00 36.72 2.12
2257 2340 9.519191 TTACCACACTTATGTTACTACTCACTA 57.481 33.333 0.00 0.00 36.72 2.74
2258 2341 6.912951 ACCACACTTATGTTACTACTCACT 57.087 37.500 0.00 0.00 36.72 3.41
2259 2342 8.084073 TGTTACCACACTTATGTTACTACTCAC 58.916 37.037 0.00 0.00 36.72 3.51
2260 2343 8.180706 TGTTACCACACTTATGTTACTACTCA 57.819 34.615 0.00 0.00 36.72 3.41
2261 2344 9.084164 CATGTTACCACACTTATGTTACTACTC 57.916 37.037 0.00 0.00 36.72 2.59
2262 2345 7.548075 GCATGTTACCACACTTATGTTACTACT 59.452 37.037 0.00 0.00 36.72 2.57
2263 2346 7.463648 CGCATGTTACCACACTTATGTTACTAC 60.464 40.741 0.00 0.00 36.72 2.73
2264 2347 6.532302 CGCATGTTACCACACTTATGTTACTA 59.468 38.462 0.00 0.00 36.72 1.82
2265 2348 5.350365 CGCATGTTACCACACTTATGTTACT 59.650 40.000 0.00 0.00 36.72 2.24
2266 2349 5.349270 TCGCATGTTACCACACTTATGTTAC 59.651 40.000 0.00 0.00 36.72 2.50
2267 2350 5.480205 TCGCATGTTACCACACTTATGTTA 58.520 37.500 0.00 0.00 36.72 2.41
2268 2351 4.320023 TCGCATGTTACCACACTTATGTT 58.680 39.130 0.00 0.00 36.72 2.71
2269 2352 3.932822 TCGCATGTTACCACACTTATGT 58.067 40.909 0.00 0.00 40.80 2.29
2270 2353 4.727734 GCTTCGCATGTTACCACACTTATG 60.728 45.833 0.00 0.00 35.03 1.90
2271 2354 3.374058 GCTTCGCATGTTACCACACTTAT 59.626 43.478 0.00 0.00 35.03 1.73
2272 2355 2.739913 GCTTCGCATGTTACCACACTTA 59.260 45.455 0.00 0.00 35.03 2.24
2273 2356 1.535462 GCTTCGCATGTTACCACACTT 59.465 47.619 0.00 0.00 35.03 3.16
2274 2357 1.156736 GCTTCGCATGTTACCACACT 58.843 50.000 0.00 0.00 35.03 3.55
2275 2358 1.156736 AGCTTCGCATGTTACCACAC 58.843 50.000 0.00 0.00 35.03 3.82
2276 2359 1.804151 GAAGCTTCGCATGTTACCACA 59.196 47.619 11.40 0.00 37.31 4.17
2277 2360 1.804151 TGAAGCTTCGCATGTTACCAC 59.196 47.619 21.11 0.00 0.00 4.16
2278 2361 2.177394 TGAAGCTTCGCATGTTACCA 57.823 45.000 21.11 0.00 0.00 3.25
2279 2362 3.764885 AATGAAGCTTCGCATGTTACC 57.235 42.857 21.11 0.00 0.00 2.85
2280 2363 5.869350 AGTAAATGAAGCTTCGCATGTTAC 58.131 37.500 21.11 20.04 0.00 2.50
2281 2364 6.816640 ACTAGTAAATGAAGCTTCGCATGTTA 59.183 34.615 21.11 11.31 0.00 2.41
2282 2365 5.643777 ACTAGTAAATGAAGCTTCGCATGTT 59.356 36.000 21.11 12.19 0.00 2.71
2283 2366 5.178797 ACTAGTAAATGAAGCTTCGCATGT 58.821 37.500 21.11 8.80 0.00 3.21
2284 2367 5.725110 ACTAGTAAATGAAGCTTCGCATG 57.275 39.130 21.11 8.36 0.00 4.06
2285 2368 9.542462 TTATAACTAGTAAATGAAGCTTCGCAT 57.458 29.630 21.11 8.34 0.00 4.73
2286 2369 8.936070 TTATAACTAGTAAATGAAGCTTCGCA 57.064 30.769 21.11 6.13 0.00 5.10
2287 2370 9.634300 GTTTATAACTAGTAAATGAAGCTTCGC 57.366 33.333 21.11 8.90 0.00 4.70
2303 2386 8.792633 GCCCAATGCAATATGAGTTTATAACTA 58.207 33.333 0.00 0.00 40.25 2.24
2304 2387 7.661040 GCCCAATGCAATATGAGTTTATAACT 58.339 34.615 0.00 0.00 41.93 2.24
2305 2388 7.873739 GCCCAATGCAATATGAGTTTATAAC 57.126 36.000 0.00 0.00 40.77 1.89
2321 2404 3.738830 ATAACATCACATGCCCAATGC 57.261 42.857 0.00 0.00 40.22 3.56
2322 2405 7.229306 AGTTACTATAACATCACATGCCCAATG 59.771 37.037 0.00 0.00 42.48 2.82
2323 2406 7.290061 AGTTACTATAACATCACATGCCCAAT 58.710 34.615 0.00 0.00 0.00 3.16
2324 2407 6.658849 AGTTACTATAACATCACATGCCCAA 58.341 36.000 0.00 0.00 0.00 4.12
2325 2408 6.247229 AGTTACTATAACATCACATGCCCA 57.753 37.500 0.00 0.00 0.00 5.36
2326 2409 6.369065 GCTAGTTACTATAACATCACATGCCC 59.631 42.308 0.00 0.00 0.00 5.36
2327 2410 7.155328 AGCTAGTTACTATAACATCACATGCC 58.845 38.462 0.00 0.00 0.00 4.40
2328 2411 9.692749 TTAGCTAGTTACTATAACATCACATGC 57.307 33.333 0.00 0.00 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.