Multiple sequence alignment - TraesCS2B01G486800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G486800 chr2B 100.000 1525 0 0 1 1525 683173414 683171890 0.000000e+00 2817.0
1 TraesCS2B01G486800 chr2B 100.000 1399 0 0 1860 3258 683171555 683170157 0.000000e+00 2584.0
2 TraesCS2B01G486800 chr2B 89.671 213 13 5 2753 2959 390911154 390910945 2.490000e-66 263.0
3 TraesCS2B01G486800 chr2B 92.754 69 2 1 1860 1928 683171501 683171436 2.680000e-16 97.1
4 TraesCS2B01G486800 chr2B 100.000 32 0 0 669 700 738409715 738409746 3.510000e-05 60.2
5 TraesCS2B01G486800 chr2A 88.841 1165 66 25 392 1525 710266014 710264883 0.000000e+00 1373.0
6 TraesCS2B01G486800 chr2A 92.000 675 23 15 1964 2627 710264451 710263797 0.000000e+00 918.0
7 TraesCS2B01G486800 chr2A 93.571 140 5 2 19 154 710266190 710266051 4.260000e-49 206.0
8 TraesCS2B01G486800 chr2A 79.255 188 18 8 1921 2108 738342936 738343102 9.560000e-21 111.0
9 TraesCS2B01G486800 chr2A 81.197 117 16 5 3093 3206 738343819 738343932 4.480000e-14 89.8
10 TraesCS2B01G486800 chr2D 88.753 1147 61 31 392 1521 571538887 571537792 0.000000e+00 1341.0
11 TraesCS2B01G486800 chr2D 88.759 1112 59 29 446 1525 571459139 571458062 0.000000e+00 1301.0
12 TraesCS2B01G486800 chr2D 85.000 660 31 37 1899 2547 571537436 571536834 2.780000e-170 608.0
13 TraesCS2B01G486800 chr2D 89.432 511 13 23 1899 2397 571457950 571457469 1.000000e-169 606.0
14 TraesCS2B01G486800 chr2D 85.981 321 25 6 2955 3258 571456916 571456599 3.130000e-85 326.0
15 TraesCS2B01G486800 chr2D 92.344 209 9 4 2753 2956 629389417 629389211 1.140000e-74 291.0
16 TraesCS2B01G486800 chr2D 82.160 213 19 5 3054 3258 571536239 571536038 7.230000e-37 165.0
17 TraesCS2B01G486800 chr2D 90.833 120 8 1 1860 1979 571458124 571458008 1.210000e-34 158.0
18 TraesCS2B01G486800 chr2D 89.167 120 10 1 1860 1979 571458073 571457957 2.620000e-31 147.0
19 TraesCS2B01G486800 chr2D 81.657 169 26 4 3093 3258 606700536 606700702 5.670000e-28 135.0
20 TraesCS2B01G486800 chr2D 98.649 74 1 0 1452 1525 571458084 571458011 7.330000e-27 132.0
21 TraesCS2B01G486800 chr2D 97.297 74 2 0 1452 1525 571458033 571457960 3.410000e-25 126.0
22 TraesCS2B01G486800 chr2D 78.099 242 23 11 1873 2108 606695465 606695682 3.410000e-25 126.0
23 TraesCS2B01G486800 chr2D 91.304 69 3 1 1860 1928 571537421 571537356 1.240000e-14 91.6
24 TraesCS2B01G486800 chr5A 98.837 172 2 0 158 329 376463458 376463287 1.140000e-79 307.0
25 TraesCS2B01G486800 chr5A 88.158 228 20 3 2746 2966 657989634 657989861 6.930000e-67 265.0
26 TraesCS2B01G486800 chr5A 95.833 144 6 0 184 327 459000182 459000325 1.950000e-57 233.0
27 TraesCS2B01G486800 chr1B 92.647 204 13 2 2753 2955 597105801 597105599 3.180000e-75 292.0
28 TraesCS2B01G486800 chr1B 94.828 174 9 0 155 328 85266008 85266181 4.140000e-69 272.0
29 TraesCS2B01G486800 chr6D 91.304 207 15 2 2751 2955 456277691 456277486 2.480000e-71 279.0
30 TraesCS2B01G486800 chr1D 90.654 214 13 3 2750 2956 482994091 482993878 8.900000e-71 278.0
31 TraesCS2B01G486800 chr1D 90.521 211 15 2 2753 2958 183354762 183354972 1.150000e-69 274.0
32 TraesCS2B01G486800 chr3D 90.952 210 12 4 2753 2955 484804115 484803906 3.200000e-70 276.0
33 TraesCS2B01G486800 chr5D 90.476 210 16 4 2753 2961 6084001 6084207 1.150000e-69 274.0
34 TraesCS2B01G486800 chr5D 97.842 139 3 0 164 302 311635467 311635605 1.170000e-59 241.0
35 TraesCS2B01G486800 chrUn 94.828 174 9 0 155 328 3862913 3863086 4.140000e-69 272.0
36 TraesCS2B01G486800 chrUn 95.484 155 5 2 164 317 332752236 332752389 2.510000e-61 246.0
37 TraesCS2B01G486800 chr4A 90.184 163 9 2 164 326 709200589 709200434 4.260000e-49 206.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G486800 chr2B 683170157 683173414 3257 True 1832.700000 2817 97.584667 1 3258 3 chr2B.!!$R2 3257
1 TraesCS2B01G486800 chr2A 710263797 710266190 2393 True 832.333333 1373 91.470667 19 2627 3 chr2A.!!$R1 2608
2 TraesCS2B01G486800 chr2D 571536038 571538887 2849 True 551.400000 1341 86.804250 392 3258 4 chr2D.!!$R3 2866
3 TraesCS2B01G486800 chr2D 571456599 571459139 2540 True 399.428571 1301 91.445429 446 3258 7 chr2D.!!$R2 2812

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
173 178 0.107654 AAGATCTTTAGGGCGCGCTT 60.108 50.0 32.72 21.51 0.00 4.68 F
265 270 0.168128 CTGGAAATGAAACGGCCGAC 59.832 55.0 35.90 22.05 0.00 4.79 F
2117 2681 0.179197 GAGCACACGATCGAGACGAA 60.179 55.0 24.34 0.00 39.99 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1164 1217 1.226717 GCTCCGAGGAGTTAGTGCG 60.227 63.158 19.22 0.0 43.70 5.34 R
2182 2750 0.179171 ATGCACGTAGAGTTCGACGG 60.179 55.000 16.87 8.6 46.65 4.79 R
2948 3843 0.038159 GGACAAGGACAGTGGACGAG 60.038 60.000 0.00 0.0 0.00 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.115266 CCGGAGCCAAAACCCACT 59.885 61.111 0.00 0.00 0.00 4.00
58 59 3.070446 TCCCGTAAAAGTGTCATGTCAGT 59.930 43.478 0.00 0.00 0.00 3.41
67 68 0.642291 GTCATGTCAGTGCGTCATCG 59.358 55.000 0.00 0.00 40.37 3.84
87 88 1.898574 CATACCCATTGAGCCGCCC 60.899 63.158 0.00 0.00 0.00 6.13
128 132 4.980805 TTGTCCGGCGCCACTGTC 62.981 66.667 28.98 12.27 0.00 3.51
154 159 8.410141 CGCAAAATATCACTTTAATTTAGGGGA 58.590 33.333 0.00 0.00 0.00 4.81
162 167 9.997172 ATCACTTTAATTTAGGGGAAGATCTTT 57.003 29.630 9.87 0.00 0.00 2.52
165 170 9.922477 ACTTTAATTTAGGGGAAGATCTTTAGG 57.078 33.333 9.87 0.00 0.00 2.69
166 171 9.355916 CTTTAATTTAGGGGAAGATCTTTAGGG 57.644 37.037 9.87 0.00 0.00 3.53
167 172 4.790718 TTTAGGGGAAGATCTTTAGGGC 57.209 45.455 9.87 0.00 0.00 5.19
168 173 1.132500 AGGGGAAGATCTTTAGGGCG 58.868 55.000 9.87 0.00 0.00 6.13
169 174 0.535328 GGGGAAGATCTTTAGGGCGC 60.535 60.000 9.87 0.00 0.00 6.53
170 175 0.880718 GGGAAGATCTTTAGGGCGCG 60.881 60.000 9.87 0.00 0.00 6.86
171 176 1.499688 GGAAGATCTTTAGGGCGCGC 61.500 60.000 25.94 25.94 0.00 6.86
172 177 0.530870 GAAGATCTTTAGGGCGCGCT 60.531 55.000 32.29 30.50 0.00 5.92
173 178 0.107654 AAGATCTTTAGGGCGCGCTT 60.108 50.000 32.72 21.51 0.00 4.68
174 179 0.811616 AGATCTTTAGGGCGCGCTTG 60.812 55.000 32.72 21.15 0.00 4.01
175 180 1.776034 GATCTTTAGGGCGCGCTTGG 61.776 60.000 32.72 20.71 0.00 3.61
176 181 2.252072 ATCTTTAGGGCGCGCTTGGA 62.252 55.000 32.72 24.70 0.00 3.53
177 182 1.819632 CTTTAGGGCGCGCTTGGAT 60.820 57.895 32.72 14.54 0.00 3.41
178 183 1.376609 CTTTAGGGCGCGCTTGGATT 61.377 55.000 32.72 9.72 0.00 3.01
179 184 1.653094 TTTAGGGCGCGCTTGGATTG 61.653 55.000 32.72 0.00 0.00 2.67
182 187 3.211963 GGCGCGCTTGGATTGGAT 61.212 61.111 32.29 0.00 0.00 3.41
183 188 2.025156 GCGCGCTTGGATTGGATG 59.975 61.111 26.67 0.00 0.00 3.51
184 189 2.764314 GCGCGCTTGGATTGGATGT 61.764 57.895 26.67 0.00 0.00 3.06
185 190 1.436195 GCGCGCTTGGATTGGATGTA 61.436 55.000 26.67 0.00 0.00 2.29
186 191 1.229428 CGCGCTTGGATTGGATGTAT 58.771 50.000 5.56 0.00 0.00 2.29
187 192 1.603802 CGCGCTTGGATTGGATGTATT 59.396 47.619 5.56 0.00 0.00 1.89
188 193 2.033299 CGCGCTTGGATTGGATGTATTT 59.967 45.455 5.56 0.00 0.00 1.40
189 194 3.374745 GCGCTTGGATTGGATGTATTTG 58.625 45.455 0.00 0.00 0.00 2.32
190 195 3.066621 GCGCTTGGATTGGATGTATTTGA 59.933 43.478 0.00 0.00 0.00 2.69
191 196 4.439974 GCGCTTGGATTGGATGTATTTGAA 60.440 41.667 0.00 0.00 0.00 2.69
192 197 5.737063 GCGCTTGGATTGGATGTATTTGAAT 60.737 40.000 0.00 0.00 0.00 2.57
193 198 6.514870 GCGCTTGGATTGGATGTATTTGAATA 60.515 38.462 0.00 0.00 0.00 1.75
194 199 6.857964 CGCTTGGATTGGATGTATTTGAATAC 59.142 38.462 6.88 6.88 41.24 1.89
215 220 5.488262 ACACCGGTATTTAACTTACAGGT 57.512 39.130 6.87 11.49 45.26 4.00
217 222 5.488262 ACCGGTATTTAACTTACAGGTGT 57.512 39.130 4.49 0.00 43.54 4.16
218 223 6.603940 ACCGGTATTTAACTTACAGGTGTA 57.396 37.500 4.49 0.00 43.54 2.90
219 224 7.003402 ACCGGTATTTAACTTACAGGTGTAA 57.997 36.000 4.49 2.68 43.54 2.41
220 225 7.623630 ACCGGTATTTAACTTACAGGTGTAAT 58.376 34.615 4.49 0.00 43.54 1.89
221 226 8.102676 ACCGGTATTTAACTTACAGGTGTAATT 58.897 33.333 4.49 0.00 43.54 1.40
222 227 8.949177 CCGGTATTTAACTTACAGGTGTAATTT 58.051 33.333 9.57 9.57 39.49 1.82
227 232 9.723601 ATTTAACTTACAGGTGTAATTTACCGA 57.276 29.630 10.55 3.80 43.06 4.69
228 233 8.761575 TTAACTTACAGGTGTAATTTACCGAG 57.238 34.615 10.55 5.98 43.06 4.63
229 234 5.173664 ACTTACAGGTGTAATTTACCGAGC 58.826 41.667 3.08 0.00 43.06 5.03
230 235 3.975168 ACAGGTGTAATTTACCGAGCT 57.025 42.857 4.17 0.00 43.06 4.09
231 236 3.596214 ACAGGTGTAATTTACCGAGCTG 58.404 45.455 17.69 17.69 43.06 4.24
232 237 2.351726 CAGGTGTAATTTACCGAGCTGC 59.648 50.000 11.05 0.00 43.06 5.25
233 238 1.326548 GGTGTAATTTACCGAGCTGCG 59.673 52.381 0.00 0.00 40.47 5.18
234 239 2.264813 GTGTAATTTACCGAGCTGCGA 58.735 47.619 0.00 0.00 44.57 5.10
235 240 2.669434 GTGTAATTTACCGAGCTGCGAA 59.331 45.455 0.00 0.00 44.57 4.70
236 241 2.927477 TGTAATTTACCGAGCTGCGAAG 59.073 45.455 0.00 0.00 44.57 3.79
237 242 1.369625 AATTTACCGAGCTGCGAAGG 58.630 50.000 0.00 8.99 44.57 3.46
238 243 0.535335 ATTTACCGAGCTGCGAAGGA 59.465 50.000 15.69 0.00 44.57 3.36
251 256 3.625745 GAAGGAGTTTCGGCTGGAA 57.374 52.632 0.00 0.00 0.00 3.53
252 257 1.892209 GAAGGAGTTTCGGCTGGAAA 58.108 50.000 0.00 0.00 42.23 3.13
253 258 2.437413 GAAGGAGTTTCGGCTGGAAAT 58.563 47.619 6.73 0.00 45.80 2.17
254 259 1.826385 AGGAGTTTCGGCTGGAAATG 58.174 50.000 0.00 0.00 45.80 2.32
255 260 1.351017 AGGAGTTTCGGCTGGAAATGA 59.649 47.619 0.00 0.00 45.80 2.57
256 261 2.159382 GGAGTTTCGGCTGGAAATGAA 58.841 47.619 0.00 0.00 45.80 2.57
257 262 2.556622 GGAGTTTCGGCTGGAAATGAAA 59.443 45.455 0.00 0.00 45.80 2.69
258 263 3.565516 GAGTTTCGGCTGGAAATGAAAC 58.434 45.455 8.25 8.25 45.80 2.78
259 264 2.315901 GTTTCGGCTGGAAATGAAACG 58.684 47.619 6.73 0.00 45.80 3.60
260 265 0.878416 TTCGGCTGGAAATGAAACGG 59.122 50.000 0.00 0.00 0.00 4.44
261 266 1.154035 CGGCTGGAAATGAAACGGC 60.154 57.895 0.00 0.00 35.80 5.68
262 267 4.889427 GCTGGAAATGAAACGGCC 57.111 55.556 0.00 0.00 0.00 6.13
263 268 1.154035 GCTGGAAATGAAACGGCCG 60.154 57.895 26.86 26.86 0.00 6.13
264 269 1.582610 GCTGGAAATGAAACGGCCGA 61.583 55.000 35.90 10.13 0.00 5.54
265 270 0.168128 CTGGAAATGAAACGGCCGAC 59.832 55.000 35.90 22.05 0.00 4.79
290 295 6.221659 GGAGGTCCGTATATTTTCTACAAGG 58.778 44.000 0.00 0.00 0.00 3.61
291 296 6.170846 AGGTCCGTATATTTTCTACAAGGG 57.829 41.667 0.00 0.00 0.00 3.95
292 297 5.664457 AGGTCCGTATATTTTCTACAAGGGT 59.336 40.000 0.00 0.00 0.00 4.34
293 298 6.840705 AGGTCCGTATATTTTCTACAAGGGTA 59.159 38.462 0.00 0.00 0.00 3.69
294 299 7.511714 AGGTCCGTATATTTTCTACAAGGGTAT 59.488 37.037 0.00 0.00 0.00 2.73
295 300 8.152898 GGTCCGTATATTTTCTACAAGGGTATT 58.847 37.037 0.00 0.00 0.00 1.89
296 301 9.551734 GTCCGTATATTTTCTACAAGGGTATTT 57.448 33.333 0.00 0.00 0.00 1.40
297 302 9.550406 TCCGTATATTTTCTACAAGGGTATTTG 57.450 33.333 0.00 0.00 0.00 2.32
298 303 9.550406 CCGTATATTTTCTACAAGGGTATTTGA 57.450 33.333 0.00 0.00 0.00 2.69
302 307 7.703058 ATTTTCTACAAGGGTATTTGAGTGG 57.297 36.000 0.00 0.00 0.00 4.00
303 308 6.442541 TTTCTACAAGGGTATTTGAGTGGA 57.557 37.500 0.00 0.00 0.00 4.02
304 309 6.442541 TTCTACAAGGGTATTTGAGTGGAA 57.557 37.500 0.00 0.00 0.00 3.53
305 310 6.442541 TCTACAAGGGTATTTGAGTGGAAA 57.557 37.500 0.00 0.00 0.00 3.13
306 311 6.235664 TCTACAAGGGTATTTGAGTGGAAAC 58.764 40.000 0.00 0.00 0.00 2.78
307 312 3.818773 ACAAGGGTATTTGAGTGGAAACG 59.181 43.478 0.00 0.00 0.00 3.60
308 313 4.069304 CAAGGGTATTTGAGTGGAAACGA 58.931 43.478 0.00 0.00 0.00 3.85
309 314 3.671716 AGGGTATTTGAGTGGAAACGAC 58.328 45.455 0.00 0.00 0.00 4.34
310 315 3.071892 AGGGTATTTGAGTGGAAACGACA 59.928 43.478 0.00 0.00 0.00 4.35
311 316 3.816523 GGGTATTTGAGTGGAAACGACAA 59.183 43.478 0.00 0.00 0.00 3.18
312 317 4.457949 GGGTATTTGAGTGGAAACGACAAT 59.542 41.667 0.00 0.00 0.00 2.71
313 318 5.391629 GGGTATTTGAGTGGAAACGACAATC 60.392 44.000 0.00 0.00 33.87 2.67
314 319 4.766404 ATTTGAGTGGAAACGACAATCC 57.234 40.909 0.00 0.00 32.40 3.01
315 320 2.920724 TGAGTGGAAACGACAATCCA 57.079 45.000 0.00 0.00 43.32 3.41
316 321 3.201353 TGAGTGGAAACGACAATCCAA 57.799 42.857 0.00 0.00 46.78 3.53
317 322 3.546724 TGAGTGGAAACGACAATCCAAA 58.453 40.909 0.00 0.00 46.78 3.28
318 323 3.314080 TGAGTGGAAACGACAATCCAAAC 59.686 43.478 0.00 0.00 46.78 2.93
319 324 3.283751 AGTGGAAACGACAATCCAAACA 58.716 40.909 0.00 0.00 46.78 2.83
320 325 3.888930 AGTGGAAACGACAATCCAAACAT 59.111 39.130 0.00 0.00 46.78 2.71
321 326 3.980775 GTGGAAACGACAATCCAAACATG 59.019 43.478 0.00 0.00 46.78 3.21
322 327 2.986479 GGAAACGACAATCCAAACATGC 59.014 45.455 0.00 0.00 35.71 4.06
323 328 2.723124 AACGACAATCCAAACATGCC 57.277 45.000 0.00 0.00 0.00 4.40
324 329 0.887933 ACGACAATCCAAACATGCCC 59.112 50.000 0.00 0.00 0.00 5.36
325 330 1.176527 CGACAATCCAAACATGCCCT 58.823 50.000 0.00 0.00 0.00 5.19
326 331 1.545582 CGACAATCCAAACATGCCCTT 59.454 47.619 0.00 0.00 0.00 3.95
328 333 3.181497 CGACAATCCAAACATGCCCTTAG 60.181 47.826 0.00 0.00 0.00 2.18
330 335 4.019174 ACAATCCAAACATGCCCTTAGAG 58.981 43.478 0.00 0.00 0.00 2.43
337 342 4.862641 AACATGCCCTTAGAGGTATTGT 57.137 40.909 0.00 0.00 31.93 2.71
345 350 6.064717 GCCCTTAGAGGTATTGTGAAATCAT 58.935 40.000 0.00 0.00 31.93 2.45
350 355 8.948631 TTAGAGGTATTGTGAAATCATCTCAC 57.051 34.615 0.00 0.00 42.94 3.51
351 356 6.045318 AGAGGTATTGTGAAATCATCTCACG 58.955 40.000 0.00 0.00 45.10 4.35
355 360 3.961480 TGTGAAATCATCTCACGTCCT 57.039 42.857 0.00 0.00 45.10 3.85
356 361 3.849911 TGTGAAATCATCTCACGTCCTC 58.150 45.455 0.00 0.00 45.10 3.71
358 363 3.614616 GTGAAATCATCTCACGTCCTCAC 59.385 47.826 0.00 0.00 34.32 3.51
359 364 2.969628 AATCATCTCACGTCCTCACC 57.030 50.000 0.00 0.00 0.00 4.02
361 366 2.801077 TCATCTCACGTCCTCACCTA 57.199 50.000 0.00 0.00 0.00 3.08
362 367 3.298686 TCATCTCACGTCCTCACCTAT 57.701 47.619 0.00 0.00 0.00 2.57
363 368 2.952310 TCATCTCACGTCCTCACCTATG 59.048 50.000 0.00 0.00 0.00 2.23
364 369 2.801077 TCTCACGTCCTCACCTATGA 57.199 50.000 0.00 0.00 0.00 2.15
365 370 3.081710 TCTCACGTCCTCACCTATGAA 57.918 47.619 0.00 0.00 33.30 2.57
366 371 2.753452 TCTCACGTCCTCACCTATGAAC 59.247 50.000 0.00 0.00 33.30 3.18
367 372 2.755655 CTCACGTCCTCACCTATGAACT 59.244 50.000 0.00 0.00 33.30 3.01
368 373 3.162666 TCACGTCCTCACCTATGAACTT 58.837 45.455 0.00 0.00 33.30 2.66
369 374 3.192844 TCACGTCCTCACCTATGAACTTC 59.807 47.826 0.00 0.00 33.30 3.01
370 375 2.496470 ACGTCCTCACCTATGAACTTCC 59.504 50.000 0.00 0.00 33.30 3.46
371 376 2.159085 CGTCCTCACCTATGAACTTCCC 60.159 54.545 0.00 0.00 33.30 3.97
372 377 2.170817 GTCCTCACCTATGAACTTCCCC 59.829 54.545 0.00 0.00 33.30 4.81
373 378 2.045885 TCCTCACCTATGAACTTCCCCT 59.954 50.000 0.00 0.00 33.30 4.79
374 379 3.273886 TCCTCACCTATGAACTTCCCCTA 59.726 47.826 0.00 0.00 33.30 3.53
375 380 4.037927 CCTCACCTATGAACTTCCCCTAA 58.962 47.826 0.00 0.00 33.30 2.69
376 381 4.660771 CCTCACCTATGAACTTCCCCTAAT 59.339 45.833 0.00 0.00 33.30 1.73
377 382 5.844516 CCTCACCTATGAACTTCCCCTAATA 59.155 44.000 0.00 0.00 33.30 0.98
378 383 6.329197 CCTCACCTATGAACTTCCCCTAATAA 59.671 42.308 0.00 0.00 33.30 1.40
379 384 7.374975 TCACCTATGAACTTCCCCTAATAAG 57.625 40.000 0.00 0.00 0.00 1.73
380 385 6.906901 TCACCTATGAACTTCCCCTAATAAGT 59.093 38.462 0.00 0.00 37.54 2.24
381 386 7.404980 TCACCTATGAACTTCCCCTAATAAGTT 59.595 37.037 0.00 0.00 45.99 2.66
382 387 8.711170 CACCTATGAACTTCCCCTAATAAGTTA 58.289 37.037 0.00 0.00 43.97 2.24
383 388 8.935741 ACCTATGAACTTCCCCTAATAAGTTAG 58.064 37.037 0.00 0.00 43.97 2.34
384 389 8.935741 CCTATGAACTTCCCCTAATAAGTTAGT 58.064 37.037 0.00 0.00 43.97 2.24
388 393 9.330220 TGAACTTCCCCTAATAAGTTAGTAAGT 57.670 33.333 0.00 0.00 43.97 2.24
390 395 9.955102 AACTTCCCCTAATAAGTTAGTAAGTTG 57.045 33.333 12.40 0.00 42.57 3.16
409 414 4.876107 AGTTGTATGGGCATCTCGTAAAAG 59.124 41.667 0.00 0.00 0.00 2.27
525 534 6.550938 TGCAGAAGAATATATCCGATCCAT 57.449 37.500 0.00 0.00 0.00 3.41
537 546 2.824640 CCGATCCATAATCCGCTCGGA 61.825 57.143 13.81 13.81 46.47 4.55
616 627 4.632037 TGCGTGCATGCAAACTTC 57.368 50.000 30.70 8.70 43.02 3.01
712 730 2.904178 TATGCTCGGCGTCAGAGGGA 62.904 60.000 6.85 0.00 36.31 4.20
715 733 2.035155 TCGGCGTCAGAGGGAAGA 59.965 61.111 6.85 0.00 0.00 2.87
716 734 1.595993 CTCGGCGTCAGAGGGAAGAA 61.596 60.000 6.85 0.00 32.38 2.52
717 735 1.183030 TCGGCGTCAGAGGGAAGAAA 61.183 55.000 6.85 0.00 0.00 2.52
740 765 3.136123 CGCCATTGGTGCTCCTGG 61.136 66.667 2.75 7.50 33.66 4.45
747 772 3.083997 GGTGCTCCTGGGGACGAT 61.084 66.667 0.00 0.00 0.00 3.73
789 818 3.165071 TGCTAGATTGCTGGGATCGATA 58.835 45.455 0.00 0.00 0.00 2.92
877 906 2.584391 GGACCCAACCTCAGCTCGT 61.584 63.158 0.00 0.00 0.00 4.18
927 959 4.817464 GTGATCCCGAGCTATCTATCGTAT 59.183 45.833 0.00 0.00 37.23 3.06
928 960 5.049954 GTGATCCCGAGCTATCTATCGTATC 60.050 48.000 0.00 0.00 37.23 2.24
929 961 3.806380 TCCCGAGCTATCTATCGTATCC 58.194 50.000 0.00 0.00 37.23 2.59
930 962 3.199289 TCCCGAGCTATCTATCGTATCCA 59.801 47.826 0.00 0.00 37.23 3.41
931 963 3.945921 CCCGAGCTATCTATCGTATCCAA 59.054 47.826 0.00 0.00 37.23 3.53
932 964 4.035792 CCCGAGCTATCTATCGTATCCAAG 59.964 50.000 0.00 0.00 37.23 3.61
933 965 4.035792 CCGAGCTATCTATCGTATCCAAGG 59.964 50.000 0.00 0.00 37.23 3.61
934 966 4.496673 CGAGCTATCTATCGTATCCAAGGC 60.497 50.000 0.00 0.00 34.30 4.35
952 984 2.040442 TCCAAGCCCTCCATCGGA 59.960 61.111 0.00 0.00 0.00 4.55
956 988 2.066999 AAGCCCTCCATCGGACTCC 61.067 63.158 0.00 0.00 0.00 3.85
957 989 2.444895 GCCCTCCATCGGACTCCT 60.445 66.667 0.00 0.00 0.00 3.69
961 993 0.397816 CCTCCATCGGACTCCTCCTT 60.398 60.000 0.00 0.00 33.79 3.36
972 1004 5.539193 TCGGACTCCTCCTTCTATAAATTCC 59.461 44.000 0.00 0.00 33.79 3.01
1109 1162 1.040646 TCTTGTGTTCGCTCTCCTGT 58.959 50.000 0.00 0.00 0.00 4.00
1117 1170 2.684843 CGCTCTCCTGTTTGCAGCC 61.685 63.158 0.00 0.00 41.26 4.85
1216 1270 5.043248 GGCAGGAATTGAATTAATTGGTCG 58.957 41.667 5.17 0.00 39.06 4.79
1217 1271 5.394115 GGCAGGAATTGAATTAATTGGTCGT 60.394 40.000 5.17 0.00 39.06 4.34
1218 1272 5.743872 GCAGGAATTGAATTAATTGGTCGTC 59.256 40.000 5.17 0.00 39.06 4.20
1219 1273 6.624861 GCAGGAATTGAATTAATTGGTCGTCA 60.625 38.462 5.17 0.00 39.06 4.35
1220 1274 7.312154 CAGGAATTGAATTAATTGGTCGTCAA 58.688 34.615 5.17 3.01 39.06 3.18
1221 1275 7.273381 CAGGAATTGAATTAATTGGTCGTCAAC 59.727 37.037 5.17 0.00 39.06 3.18
1222 1276 6.250527 GGAATTGAATTAATTGGTCGTCAACG 59.749 38.462 5.17 0.00 39.06 4.10
1415 1482 3.597728 GCGGAGGCTACGGAGGAG 61.598 72.222 22.54 0.00 35.83 3.69
1416 1483 2.907917 CGGAGGCTACGGAGGAGG 60.908 72.222 12.38 0.00 0.00 4.30
1417 1484 3.228017 GGAGGCTACGGAGGAGGC 61.228 72.222 0.00 0.00 39.71 4.70
1418 1485 3.597728 GAGGCTACGGAGGAGGCG 61.598 72.222 0.00 0.00 43.94 5.52
1421 1488 4.208686 GCTACGGAGGAGGCGGTG 62.209 72.222 0.00 0.00 0.00 4.94
1422 1489 3.528370 CTACGGAGGAGGCGGTGG 61.528 72.222 0.00 0.00 0.00 4.61
2117 2681 0.179197 GAGCACACGATCGAGACGAA 60.179 55.000 24.34 0.00 39.99 3.85
2177 2745 2.437359 GCTACTGCCCAGTGCCTG 60.437 66.667 11.02 0.90 42.52 4.85
2331 2909 4.993945 GCGCGTTGCACAGTGACG 62.994 66.667 8.43 7.61 45.45 4.35
2332 2910 3.326981 CGCGTTGCACAGTGACGA 61.327 61.111 16.75 0.62 38.99 4.20
2333 2911 2.245532 GCGTTGCACAGTGACGAC 59.754 61.111 16.75 10.86 38.99 4.34
2341 2919 1.000607 GCACAGTGACGACCTTGTAGA 60.001 52.381 4.15 0.00 0.00 2.59
2353 2931 3.412386 ACCTTGTAGAAGAACACATGCC 58.588 45.455 0.19 0.00 0.00 4.40
2358 2936 0.674895 AGAAGAACACATGCCTCCGC 60.675 55.000 0.00 0.00 0.00 5.54
2372 2950 2.046892 CCGCCCCTCTGTGTTCTG 60.047 66.667 0.00 0.00 0.00 3.02
2373 2951 2.743718 CGCCCCTCTGTGTTCTGT 59.256 61.111 0.00 0.00 0.00 3.41
2376 2954 1.673033 CGCCCCTCTGTGTTCTGTAAG 60.673 57.143 0.00 0.00 0.00 2.34
2377 2955 1.348036 GCCCCTCTGTGTTCTGTAAGT 59.652 52.381 0.00 0.00 33.76 2.24
2378 2956 2.224548 GCCCCTCTGTGTTCTGTAAGTT 60.225 50.000 0.00 0.00 33.76 2.66
2379 2957 3.747708 GCCCCTCTGTGTTCTGTAAGTTT 60.748 47.826 0.00 0.00 33.76 2.66
2382 2960 5.454187 CCCCTCTGTGTTCTGTAAGTTTGTA 60.454 44.000 0.00 0.00 33.76 2.41
2401 2979 5.305139 TGTATGTATGTCCCGTATCGATG 57.695 43.478 8.54 0.00 0.00 3.84
2455 3033 4.019681 ACCGTGGAATAAATTCACTCTGGA 60.020 41.667 5.15 0.00 38.53 3.86
2456 3034 4.941263 CCGTGGAATAAATTCACTCTGGAA 59.059 41.667 5.15 0.00 38.53 3.53
2531 3109 2.064573 TCATCACTGCTGTACGTGTG 57.935 50.000 0.00 0.00 33.07 3.82
2555 3414 2.134346 CAATGTTGCAAAAAGGGGTCG 58.866 47.619 0.00 0.00 0.00 4.79
2559 3418 1.743321 TTGCAAAAAGGGGTCGCTGG 61.743 55.000 0.00 0.00 0.00 4.85
2560 3419 1.901464 GCAAAAAGGGGTCGCTGGA 60.901 57.895 0.00 0.00 0.00 3.86
2590 3455 1.215647 GCTCTACACAGTCACCGGG 59.784 63.158 6.32 0.00 0.00 5.73
2638 3503 4.013728 TCACGAGGGATTAATTGGGTTTG 58.986 43.478 0.00 0.00 0.00 2.93
2641 3506 4.204012 CGAGGGATTAATTGGGTTTGCTA 58.796 43.478 0.00 0.00 0.00 3.49
2655 3520 1.145598 TGCTAGATCTGGCAGCTGC 59.854 57.895 30.88 30.88 42.20 5.25
2688 3553 4.748102 TCGACTGTCACTCAAAATGGTAAC 59.252 41.667 8.73 0.00 0.00 2.50
2706 3600 2.391389 CGGGAAAAGTCCGCTCAGC 61.391 63.158 0.00 0.00 46.04 4.26
2716 3611 1.117749 TCCGCTCAGCTGATGCCTAT 61.118 55.000 18.63 0.00 40.80 2.57
2741 3636 1.334059 CGCAAGCTTGTGTGTTAGTGG 60.334 52.381 28.01 0.00 34.14 4.00
2742 3637 1.600413 GCAAGCTTGTGTGTTAGTGGC 60.600 52.381 26.55 4.80 0.00 5.01
2743 3638 1.675483 CAAGCTTGTGTGTTAGTGGCA 59.325 47.619 18.65 0.00 0.00 4.92
2744 3639 1.308998 AGCTTGTGTGTTAGTGGCAC 58.691 50.000 10.29 10.29 37.37 5.01
2745 3640 1.134098 AGCTTGTGTGTTAGTGGCACT 60.134 47.619 25.34 25.34 37.70 4.40
2746 3641 1.002468 GCTTGTGTGTTAGTGGCACTG 60.002 52.381 29.65 10.72 37.70 3.66
2747 3642 2.288666 CTTGTGTGTTAGTGGCACTGT 58.711 47.619 29.65 7.57 37.70 3.55
2748 3643 1.948104 TGTGTGTTAGTGGCACTGTC 58.052 50.000 29.65 20.75 37.70 3.51
2749 3644 1.226746 GTGTGTTAGTGGCACTGTCC 58.773 55.000 29.65 16.64 37.70 4.02
2750 3645 1.128200 TGTGTTAGTGGCACTGTCCT 58.872 50.000 29.65 5.95 37.70 3.85
2751 3646 1.488812 TGTGTTAGTGGCACTGTCCTT 59.511 47.619 29.65 5.15 37.70 3.36
2752 3647 1.873591 GTGTTAGTGGCACTGTCCTTG 59.126 52.381 29.65 0.00 34.30 3.61
2753 3648 1.202758 TGTTAGTGGCACTGTCCTTGG 60.203 52.381 29.65 0.00 0.00 3.61
2754 3649 1.071699 GTTAGTGGCACTGTCCTTGGA 59.928 52.381 29.65 4.23 0.00 3.53
2755 3650 1.656587 TAGTGGCACTGTCCTTGGAT 58.343 50.000 29.65 1.97 0.00 3.41
2756 3651 0.326264 AGTGGCACTGTCCTTGGATC 59.674 55.000 21.37 0.00 0.00 3.36
2757 3652 0.678048 GTGGCACTGTCCTTGGATCC 60.678 60.000 11.13 4.20 0.00 3.36
2758 3653 1.450312 GGCACTGTCCTTGGATCCG 60.450 63.158 7.39 0.00 0.00 4.18
2759 3654 1.450312 GCACTGTCCTTGGATCCGG 60.450 63.158 7.39 2.99 0.00 5.14
2760 3655 1.450312 CACTGTCCTTGGATCCGGC 60.450 63.158 7.39 0.00 0.00 6.13
2761 3656 1.613630 ACTGTCCTTGGATCCGGCT 60.614 57.895 7.39 0.00 0.00 5.52
2762 3657 1.201429 ACTGTCCTTGGATCCGGCTT 61.201 55.000 7.39 0.00 0.00 4.35
2763 3658 0.745845 CTGTCCTTGGATCCGGCTTG 60.746 60.000 7.39 0.00 0.00 4.01
2764 3659 1.299976 GTCCTTGGATCCGGCTTGT 59.700 57.895 7.39 0.00 0.00 3.16
2765 3660 0.744771 GTCCTTGGATCCGGCTTGTC 60.745 60.000 7.39 0.00 0.00 3.18
2766 3661 0.909610 TCCTTGGATCCGGCTTGTCT 60.910 55.000 7.39 0.00 0.00 3.41
2767 3662 0.745845 CCTTGGATCCGGCTTGTCTG 60.746 60.000 7.39 0.00 0.00 3.51
2768 3663 1.372087 CTTGGATCCGGCTTGTCTGC 61.372 60.000 7.39 0.00 0.00 4.26
2769 3664 1.841302 TTGGATCCGGCTTGTCTGCT 61.841 55.000 7.39 0.00 0.00 4.24
2770 3665 1.078143 GGATCCGGCTTGTCTGCTT 60.078 57.895 0.00 0.00 0.00 3.91
2771 3666 1.092345 GGATCCGGCTTGTCTGCTTC 61.092 60.000 0.00 0.00 0.00 3.86
2772 3667 1.078143 ATCCGGCTTGTCTGCTTCC 60.078 57.895 0.00 0.00 0.00 3.46
2773 3668 1.557269 ATCCGGCTTGTCTGCTTCCT 61.557 55.000 0.00 0.00 0.00 3.36
2774 3669 1.302832 CCGGCTTGTCTGCTTCCTT 60.303 57.895 0.00 0.00 0.00 3.36
2775 3670 1.301677 CCGGCTTGTCTGCTTCCTTC 61.302 60.000 0.00 0.00 0.00 3.46
2776 3671 1.301677 CGGCTTGTCTGCTTCCTTCC 61.302 60.000 0.00 0.00 0.00 3.46
2777 3672 0.962855 GGCTTGTCTGCTTCCTTCCC 60.963 60.000 0.00 0.00 0.00 3.97
2778 3673 0.250901 GCTTGTCTGCTTCCTTCCCA 60.251 55.000 0.00 0.00 0.00 4.37
2779 3674 1.615384 GCTTGTCTGCTTCCTTCCCAT 60.615 52.381 0.00 0.00 0.00 4.00
2780 3675 2.089980 CTTGTCTGCTTCCTTCCCATG 58.910 52.381 0.00 0.00 0.00 3.66
2781 3676 0.322816 TGTCTGCTTCCTTCCCATGC 60.323 55.000 0.00 0.00 0.00 4.06
2782 3677 0.034670 GTCTGCTTCCTTCCCATGCT 60.035 55.000 0.00 0.00 0.00 3.79
2783 3678 0.700564 TCTGCTTCCTTCCCATGCTT 59.299 50.000 0.00 0.00 0.00 3.91
2784 3679 1.076024 TCTGCTTCCTTCCCATGCTTT 59.924 47.619 0.00 0.00 0.00 3.51
2785 3680 1.475682 CTGCTTCCTTCCCATGCTTTC 59.524 52.381 0.00 0.00 0.00 2.62
2786 3681 1.203038 TGCTTCCTTCCCATGCTTTCA 60.203 47.619 0.00 0.00 0.00 2.69
2787 3682 2.105766 GCTTCCTTCCCATGCTTTCAT 58.894 47.619 0.00 0.00 0.00 2.57
2788 3683 2.100418 GCTTCCTTCCCATGCTTTCATC 59.900 50.000 0.00 0.00 0.00 2.92
2789 3684 2.442236 TCCTTCCCATGCTTTCATCC 57.558 50.000 0.00 0.00 0.00 3.51
2790 3685 1.027357 CCTTCCCATGCTTTCATCCG 58.973 55.000 0.00 0.00 0.00 4.18
2791 3686 1.683011 CCTTCCCATGCTTTCATCCGT 60.683 52.381 0.00 0.00 0.00 4.69
2792 3687 1.402968 CTTCCCATGCTTTCATCCGTG 59.597 52.381 0.00 0.00 0.00 4.94
2793 3688 1.031571 TCCCATGCTTTCATCCGTGC 61.032 55.000 0.00 0.00 0.00 5.34
2794 3689 1.033746 CCCATGCTTTCATCCGTGCT 61.034 55.000 0.00 0.00 0.00 4.40
2795 3690 0.379669 CCATGCTTTCATCCGTGCTC 59.620 55.000 0.00 0.00 0.00 4.26
2796 3691 0.379669 CATGCTTTCATCCGTGCTCC 59.620 55.000 0.00 0.00 0.00 4.70
2797 3692 0.749454 ATGCTTTCATCCGTGCTCCC 60.749 55.000 0.00 0.00 0.00 4.30
2798 3693 1.377202 GCTTTCATCCGTGCTCCCA 60.377 57.895 0.00 0.00 0.00 4.37
2799 3694 1.648467 GCTTTCATCCGTGCTCCCAC 61.648 60.000 0.00 0.00 38.62 4.61
2800 3695 0.036010 CTTTCATCCGTGCTCCCACT 60.036 55.000 0.00 0.00 39.86 4.00
2801 3696 1.207089 CTTTCATCCGTGCTCCCACTA 59.793 52.381 0.00 0.00 39.86 2.74
2802 3697 0.535335 TTCATCCGTGCTCCCACTAC 59.465 55.000 0.00 0.00 39.86 2.73
2803 3698 0.613572 TCATCCGTGCTCCCACTACA 60.614 55.000 0.00 0.00 39.86 2.74
2804 3699 0.465705 CATCCGTGCTCCCACTACAT 59.534 55.000 0.00 0.00 39.86 2.29
2805 3700 0.753262 ATCCGTGCTCCCACTACATC 59.247 55.000 0.00 0.00 39.86 3.06
2806 3701 1.144057 CCGTGCTCCCACTACATCC 59.856 63.158 0.00 0.00 39.86 3.51
2807 3702 1.330655 CCGTGCTCCCACTACATCCT 61.331 60.000 0.00 0.00 39.86 3.24
2808 3703 1.399714 CGTGCTCCCACTACATCCTA 58.600 55.000 0.00 0.00 39.86 2.94
2809 3704 1.067212 CGTGCTCCCACTACATCCTAC 59.933 57.143 0.00 0.00 39.86 3.18
2810 3705 1.067212 GTGCTCCCACTACATCCTACG 59.933 57.143 0.00 0.00 38.93 3.51
2811 3706 0.674534 GCTCCCACTACATCCTACGG 59.325 60.000 0.00 0.00 0.00 4.02
2812 3707 0.674534 CTCCCACTACATCCTACGGC 59.325 60.000 0.00 0.00 0.00 5.68
2813 3708 0.260816 TCCCACTACATCCTACGGCT 59.739 55.000 0.00 0.00 0.00 5.52
2814 3709 0.389391 CCCACTACATCCTACGGCTG 59.611 60.000 0.00 0.00 0.00 4.85
2815 3710 1.112113 CCACTACATCCTACGGCTGT 58.888 55.000 2.42 2.42 0.00 4.40
2816 3711 1.067212 CCACTACATCCTACGGCTGTC 59.933 57.143 0.00 0.00 0.00 3.51
2817 3712 2.025155 CACTACATCCTACGGCTGTCT 58.975 52.381 0.00 0.00 0.00 3.41
2818 3713 2.427453 CACTACATCCTACGGCTGTCTT 59.573 50.000 0.00 0.00 0.00 3.01
2819 3714 3.097614 ACTACATCCTACGGCTGTCTTT 58.902 45.455 0.00 0.00 0.00 2.52
2820 3715 3.514309 ACTACATCCTACGGCTGTCTTTT 59.486 43.478 0.00 0.00 0.00 2.27
2821 3716 3.418684 ACATCCTACGGCTGTCTTTTT 57.581 42.857 0.00 0.00 0.00 1.94
2847 3742 8.996651 TTTCTTTCTAATCTAATCATTCCCCC 57.003 34.615 0.00 0.00 0.00 5.40
2866 3761 2.159179 CCTGATTTTAAGGGGGTGGG 57.841 55.000 0.00 0.00 0.00 4.61
2867 3762 1.342975 CCTGATTTTAAGGGGGTGGGG 60.343 57.143 0.00 0.00 0.00 4.96
2868 3763 0.041982 TGATTTTAAGGGGGTGGGGC 59.958 55.000 0.00 0.00 0.00 5.80
2869 3764 0.689745 GATTTTAAGGGGGTGGGGCC 60.690 60.000 0.00 0.00 0.00 5.80
2870 3765 2.523740 ATTTTAAGGGGGTGGGGCCG 62.524 60.000 0.00 0.00 38.44 6.13
2883 3778 4.027884 GGCCGGGCCTTATTTTGT 57.972 55.556 30.86 0.00 46.69 2.83
2884 3779 2.282827 GGCCGGGCCTTATTTTGTT 58.717 52.632 30.86 0.00 46.69 2.83
2885 3780 0.611200 GGCCGGGCCTTATTTTGTTT 59.389 50.000 30.86 0.00 46.69 2.83
2886 3781 1.404986 GGCCGGGCCTTATTTTGTTTC 60.405 52.381 30.86 0.00 46.69 2.78
2887 3782 1.273886 GCCGGGCCTTATTTTGTTTCA 59.726 47.619 8.12 0.00 0.00 2.69
2888 3783 2.289133 GCCGGGCCTTATTTTGTTTCAA 60.289 45.455 8.12 0.00 0.00 2.69
2889 3784 3.618752 GCCGGGCCTTATTTTGTTTCAAT 60.619 43.478 8.12 0.00 0.00 2.57
2890 3785 4.180817 CCGGGCCTTATTTTGTTTCAATC 58.819 43.478 0.84 0.00 0.00 2.67
2891 3786 4.322349 CCGGGCCTTATTTTGTTTCAATCA 60.322 41.667 0.84 0.00 0.00 2.57
2892 3787 5.233988 CGGGCCTTATTTTGTTTCAATCAA 58.766 37.500 0.84 0.00 0.00 2.57
2893 3788 5.698545 CGGGCCTTATTTTGTTTCAATCAAA 59.301 36.000 0.84 0.00 33.76 2.69
2894 3789 6.371271 CGGGCCTTATTTTGTTTCAATCAAAT 59.629 34.615 0.84 0.00 35.25 2.32
2895 3790 7.547370 CGGGCCTTATTTTGTTTCAATCAAATA 59.453 33.333 0.84 0.00 35.25 1.40
2896 3791 9.225436 GGGCCTTATTTTGTTTCAATCAAATAA 57.775 29.630 0.84 0.00 35.25 1.40
2903 3798 6.761731 TTGTTTCAATCAAATAAAGCCACG 57.238 33.333 0.00 0.00 0.00 4.94
2904 3799 5.837437 TGTTTCAATCAAATAAAGCCACGT 58.163 33.333 0.00 0.00 0.00 4.49
2905 3800 6.971602 TGTTTCAATCAAATAAAGCCACGTA 58.028 32.000 0.00 0.00 0.00 3.57
2906 3801 6.858993 TGTTTCAATCAAATAAAGCCACGTAC 59.141 34.615 0.00 0.00 0.00 3.67
2907 3802 5.211266 TCAATCAAATAAAGCCACGTACG 57.789 39.130 15.01 15.01 0.00 3.67
2908 3803 3.668596 ATCAAATAAAGCCACGTACGC 57.331 42.857 16.72 0.00 0.00 4.42
2909 3804 1.390803 TCAAATAAAGCCACGTACGCG 59.609 47.619 16.72 3.53 44.93 6.01
2910 3805 0.722848 AAATAAAGCCACGTACGCGG 59.277 50.000 17.94 17.94 43.45 6.46
2911 3806 1.085501 AATAAAGCCACGTACGCGGG 61.086 55.000 22.89 20.94 43.45 6.13
2912 3807 1.947597 ATAAAGCCACGTACGCGGGA 61.948 55.000 25.61 8.94 45.97 5.14
2913 3808 2.546645 TAAAGCCACGTACGCGGGAG 62.547 60.000 25.61 2.82 45.97 4.30
2949 3844 2.348998 CGGGAAGCAGGCAAGTCT 59.651 61.111 0.00 0.00 0.00 3.24
2950 3845 1.743252 CGGGAAGCAGGCAAGTCTC 60.743 63.158 0.00 0.00 0.00 3.36
2951 3846 1.743252 GGGAAGCAGGCAAGTCTCG 60.743 63.158 0.00 0.00 0.00 4.04
2952 3847 1.004440 GGAAGCAGGCAAGTCTCGT 60.004 57.895 0.00 0.00 0.00 4.18
2953 3848 1.016653 GGAAGCAGGCAAGTCTCGTC 61.017 60.000 0.00 0.00 0.00 4.20
2964 3859 0.962489 AGTCTCGTCCACTGTCCTTG 59.038 55.000 0.00 0.00 0.00 3.61
2985 3880 1.299648 CTCGGTGGCAGGGAAATCA 59.700 57.895 0.00 0.00 0.00 2.57
2995 3890 3.381590 GGCAGGGAAATCATTTACTCCAC 59.618 47.826 0.00 0.00 0.00 4.02
3000 3895 4.325030 GGGAAATCATTTACTCCACCCTCA 60.325 45.833 0.00 0.00 32.93 3.86
3005 3900 3.907474 TCATTTACTCCACCCTCAACTCA 59.093 43.478 0.00 0.00 0.00 3.41
3006 3901 4.349636 TCATTTACTCCACCCTCAACTCAA 59.650 41.667 0.00 0.00 0.00 3.02
3007 3902 4.993705 TTTACTCCACCCTCAACTCAAT 57.006 40.909 0.00 0.00 0.00 2.57
3010 3905 4.559862 ACTCCACCCTCAACTCAATAAG 57.440 45.455 0.00 0.00 0.00 1.73
3011 3906 3.264450 ACTCCACCCTCAACTCAATAAGG 59.736 47.826 0.00 0.00 0.00 2.69
3014 3909 2.058593 CCCTCAACTCAATAAGGGCC 57.941 55.000 0.00 0.00 41.98 5.80
3059 3988 5.901552 GAAACTGATTTGTTTCCAACTCCA 58.098 37.500 8.43 0.00 45.82 3.86
3060 3989 4.918810 ACTGATTTGTTTCCAACTCCAC 57.081 40.909 0.00 0.00 31.20 4.02
3069 4013 2.203139 CAACTCCACACCACCGCA 60.203 61.111 0.00 0.00 0.00 5.69
3078 4022 1.336440 CACACCACCGCAGAAATTCAA 59.664 47.619 0.00 0.00 0.00 2.69
3084 4028 2.153627 CACCGCAGAAATTCAAAAAGCG 59.846 45.455 0.00 0.00 42.93 4.68
3103 4047 4.878439 AGCGAATATGTAAGCGGACATAA 58.122 39.130 15.03 3.08 43.66 1.90
3153 4097 6.916360 ATGGTGAACATGAAATACAAAGGT 57.084 33.333 0.00 0.00 38.70 3.50
3154 4098 6.083098 TGGTGAACATGAAATACAAAGGTG 57.917 37.500 0.00 0.00 0.00 4.00
3155 4099 5.010516 TGGTGAACATGAAATACAAAGGTGG 59.989 40.000 0.00 0.00 0.00 4.61
3156 4100 5.242838 GGTGAACATGAAATACAAAGGTGGA 59.757 40.000 0.00 0.00 0.00 4.02
3157 4101 6.239176 GGTGAACATGAAATACAAAGGTGGAA 60.239 38.462 0.00 0.00 0.00 3.53
3158 4102 6.863126 GTGAACATGAAATACAAAGGTGGAAG 59.137 38.462 0.00 0.00 0.00 3.46
3159 4103 6.549364 TGAACATGAAATACAAAGGTGGAAGT 59.451 34.615 0.00 0.00 0.00 3.01
3160 4104 6.976934 ACATGAAATACAAAGGTGGAAGTT 57.023 33.333 0.00 0.00 0.00 2.66
3161 4105 7.360113 ACATGAAATACAAAGGTGGAAGTTT 57.640 32.000 0.00 0.00 0.00 2.66
3190 4142 6.503524 AGAACTCGAAAATCTCTAGAGCATC 58.496 40.000 15.35 8.91 32.60 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.112916 AAAGTGGGTTTTGGCTCCGG 61.113 55.000 0.00 0.00 0.00 5.14
1 2 0.750249 AAAAGTGGGTTTTGGCTCCG 59.250 50.000 0.00 0.00 36.96 4.63
2 3 2.299013 CCTAAAAGTGGGTTTTGGCTCC 59.701 50.000 0.00 0.00 38.85 4.70
3 4 2.299013 CCCTAAAAGTGGGTTTTGGCTC 59.701 50.000 0.00 0.00 38.85 4.70
4 5 2.325484 CCCTAAAAGTGGGTTTTGGCT 58.675 47.619 0.00 0.00 38.85 4.75
5 6 1.346395 CCCCTAAAAGTGGGTTTTGGC 59.654 52.381 0.00 0.00 43.09 4.52
6 7 2.965562 TCCCCTAAAAGTGGGTTTTGG 58.034 47.619 0.00 0.00 43.09 3.28
7 8 4.219919 TCTTCCCCTAAAAGTGGGTTTTG 58.780 43.478 0.00 0.00 43.09 2.44
8 9 4.480115 CTCTTCCCCTAAAAGTGGGTTTT 58.520 43.478 0.00 0.00 43.09 2.43
9 10 3.181422 CCTCTTCCCCTAAAAGTGGGTTT 60.181 47.826 0.00 0.00 43.09 3.27
10 11 2.378886 CCTCTTCCCCTAAAAGTGGGTT 59.621 50.000 0.00 0.00 43.09 4.11
11 12 1.993301 CCTCTTCCCCTAAAAGTGGGT 59.007 52.381 0.00 0.00 43.09 4.51
12 13 1.341089 GCCTCTTCCCCTAAAAGTGGG 60.341 57.143 6.21 0.00 44.19 4.61
13 14 1.341089 GGCCTCTTCCCCTAAAAGTGG 60.341 57.143 0.00 0.00 39.36 4.00
14 15 1.341089 GGGCCTCTTCCCCTAAAAGTG 60.341 57.143 0.84 0.00 40.51 3.16
15 16 1.000496 GGGCCTCTTCCCCTAAAAGT 59.000 55.000 0.84 0.00 40.51 2.66
16 17 3.905331 GGGCCTCTTCCCCTAAAAG 57.095 57.895 0.84 0.00 40.51 2.27
40 41 3.247648 ACGCACTGACATGACACTTTTAC 59.752 43.478 0.00 0.00 0.00 2.01
67 68 2.555547 GCGGCTCAATGGGTATGGC 61.556 63.158 0.00 0.00 0.00 4.40
128 132 8.410141 TCCCCTAAATTAAAGTGATATTTTGCG 58.590 33.333 0.00 0.00 0.00 4.85
154 159 0.107654 AAGCGCGCCCTAAAGATCTT 60.108 50.000 30.33 8.45 0.00 2.40
156 161 1.643832 CAAGCGCGCCCTAAAGATC 59.356 57.895 30.33 0.00 0.00 2.75
157 162 1.819632 CCAAGCGCGCCCTAAAGAT 60.820 57.895 30.33 2.66 0.00 2.40
158 163 2.252072 ATCCAAGCGCGCCCTAAAGA 62.252 55.000 30.33 16.51 0.00 2.52
159 164 1.376609 AATCCAAGCGCGCCCTAAAG 61.377 55.000 30.33 11.21 0.00 1.85
160 165 1.377987 AATCCAAGCGCGCCCTAAA 60.378 52.632 30.33 10.61 0.00 1.85
161 166 2.112198 CAATCCAAGCGCGCCCTAA 61.112 57.895 30.33 12.27 0.00 2.69
162 167 2.513666 CAATCCAAGCGCGCCCTA 60.514 61.111 30.33 11.84 0.00 3.53
165 170 3.211963 ATCCAATCCAAGCGCGCC 61.212 61.111 30.33 10.31 0.00 6.53
166 171 1.436195 TACATCCAATCCAAGCGCGC 61.436 55.000 26.66 26.66 0.00 6.86
167 172 1.229428 ATACATCCAATCCAAGCGCG 58.771 50.000 0.00 0.00 0.00 6.86
168 173 3.066621 TCAAATACATCCAATCCAAGCGC 59.933 43.478 0.00 0.00 0.00 5.92
169 174 4.898829 TCAAATACATCCAATCCAAGCG 57.101 40.909 0.00 0.00 0.00 4.68
170 175 7.715657 TGTATTCAAATACATCCAATCCAAGC 58.284 34.615 10.74 0.00 44.52 4.01
182 187 9.669887 AGTTAAATACCGGTGTATTCAAATACA 57.330 29.630 19.93 10.74 44.89 2.29
186 191 9.499479 TGTAAGTTAAATACCGGTGTATTCAAA 57.501 29.630 19.93 5.62 44.89 2.69
187 192 9.153721 CTGTAAGTTAAATACCGGTGTATTCAA 57.846 33.333 19.93 0.00 44.89 2.69
188 193 7.765360 CCTGTAAGTTAAATACCGGTGTATTCA 59.235 37.037 19.93 0.00 44.89 2.57
189 194 7.765819 ACCTGTAAGTTAAATACCGGTGTATTC 59.234 37.037 19.93 3.34 44.89 1.75
190 195 7.550196 CACCTGTAAGTTAAATACCGGTGTATT 59.450 37.037 19.93 7.13 45.74 1.89
191 196 7.043565 CACCTGTAAGTTAAATACCGGTGTAT 58.956 38.462 19.93 0.00 45.74 2.29
192 197 6.397272 CACCTGTAAGTTAAATACCGGTGTA 58.603 40.000 19.93 3.64 45.74 2.90
193 198 5.240121 CACCTGTAAGTTAAATACCGGTGT 58.760 41.667 19.93 8.05 45.74 4.16
194 199 5.789710 CACCTGTAAGTTAAATACCGGTG 57.210 43.478 19.93 19.61 45.67 4.94
195 200 5.488262 ACACCTGTAAGTTAAATACCGGT 57.512 39.130 13.98 13.98 40.25 5.28
196 201 8.496707 AATTACACCTGTAAGTTAAATACCGG 57.503 34.615 0.00 0.00 42.94 5.28
201 206 9.723601 TCGGTAAATTACACCTGTAAGTTAAAT 57.276 29.630 15.87 0.00 46.01 1.40
202 207 9.206870 CTCGGTAAATTACACCTGTAAGTTAAA 57.793 33.333 15.87 7.47 46.01 1.52
203 208 7.331687 GCTCGGTAAATTACACCTGTAAGTTAA 59.668 37.037 15.87 4.71 46.01 2.01
204 209 6.813152 GCTCGGTAAATTACACCTGTAAGTTA 59.187 38.462 11.99 11.99 43.96 2.24
205 210 5.640783 GCTCGGTAAATTACACCTGTAAGTT 59.359 40.000 13.62 13.62 46.34 2.66
206 211 5.046807 AGCTCGGTAAATTACACCTGTAAGT 60.047 40.000 5.45 0.00 42.94 2.24
207 212 5.291128 CAGCTCGGTAAATTACACCTGTAAG 59.709 44.000 5.45 2.35 42.94 2.34
208 213 5.172934 CAGCTCGGTAAATTACACCTGTAA 58.827 41.667 5.45 0.43 43.71 2.41
209 214 4.751060 CAGCTCGGTAAATTACACCTGTA 58.249 43.478 5.45 0.00 33.62 2.74
210 215 3.596214 CAGCTCGGTAAATTACACCTGT 58.404 45.455 5.45 0.00 33.62 4.00
211 216 2.351726 GCAGCTCGGTAAATTACACCTG 59.648 50.000 5.45 6.40 33.62 4.00
212 217 2.629051 GCAGCTCGGTAAATTACACCT 58.371 47.619 5.45 0.00 33.62 4.00
213 218 1.326548 CGCAGCTCGGTAAATTACACC 59.673 52.381 5.45 0.00 33.78 4.16
214 219 2.264813 TCGCAGCTCGGTAAATTACAC 58.735 47.619 5.45 0.00 39.05 2.90
215 220 2.658373 TCGCAGCTCGGTAAATTACA 57.342 45.000 5.45 0.00 39.05 2.41
216 221 2.284417 CCTTCGCAGCTCGGTAAATTAC 59.716 50.000 5.87 0.00 39.05 1.89
217 222 2.166870 TCCTTCGCAGCTCGGTAAATTA 59.833 45.455 5.87 0.00 39.05 1.40
218 223 1.066430 TCCTTCGCAGCTCGGTAAATT 60.066 47.619 5.87 0.00 39.05 1.82
219 224 0.535335 TCCTTCGCAGCTCGGTAAAT 59.465 50.000 5.87 0.00 39.05 1.40
220 225 0.108804 CTCCTTCGCAGCTCGGTAAA 60.109 55.000 5.87 0.00 39.05 2.01
221 226 1.248785 ACTCCTTCGCAGCTCGGTAA 61.249 55.000 5.87 0.00 39.05 2.85
222 227 1.248785 AACTCCTTCGCAGCTCGGTA 61.249 55.000 5.87 0.00 39.05 4.02
223 228 2.100879 AAACTCCTTCGCAGCTCGGT 62.101 55.000 5.87 0.00 39.05 4.69
224 229 1.355066 GAAACTCCTTCGCAGCTCGG 61.355 60.000 5.87 0.00 39.05 4.63
225 230 2.074124 GAAACTCCTTCGCAGCTCG 58.926 57.895 0.00 0.00 40.15 5.03
233 238 1.892209 TTTCCAGCCGAAACTCCTTC 58.108 50.000 0.00 0.00 35.49 3.46
234 239 2.162681 CATTTCCAGCCGAAACTCCTT 58.837 47.619 0.00 0.00 43.21 3.36
235 240 1.351017 TCATTTCCAGCCGAAACTCCT 59.649 47.619 0.00 0.00 43.21 3.69
236 241 1.821216 TCATTTCCAGCCGAAACTCC 58.179 50.000 0.00 0.00 43.21 3.85
237 242 3.565516 GTTTCATTTCCAGCCGAAACTC 58.434 45.455 0.00 0.00 43.21 3.01
238 243 2.031157 CGTTTCATTTCCAGCCGAAACT 60.031 45.455 10.93 0.00 43.21 2.66
239 244 2.315901 CGTTTCATTTCCAGCCGAAAC 58.684 47.619 0.00 0.00 43.21 2.78
240 245 1.268352 CCGTTTCATTTCCAGCCGAAA 59.732 47.619 0.00 0.00 44.49 3.46
241 246 0.878416 CCGTTTCATTTCCAGCCGAA 59.122 50.000 0.00 0.00 0.00 4.30
242 247 1.582610 GCCGTTTCATTTCCAGCCGA 61.583 55.000 0.00 0.00 0.00 5.54
243 248 1.154035 GCCGTTTCATTTCCAGCCG 60.154 57.895 0.00 0.00 0.00 5.52
244 249 1.215382 GGCCGTTTCATTTCCAGCC 59.785 57.895 0.00 0.00 0.00 4.85
245 250 1.154035 CGGCCGTTTCATTTCCAGC 60.154 57.895 19.50 0.00 0.00 4.85
246 251 0.168128 GTCGGCCGTTTCATTTCCAG 59.832 55.000 27.15 0.00 0.00 3.86
247 252 1.570347 CGTCGGCCGTTTCATTTCCA 61.570 55.000 27.15 0.00 0.00 3.53
248 253 1.133869 CGTCGGCCGTTTCATTTCC 59.866 57.895 27.15 2.07 0.00 3.13
249 254 1.133869 CCGTCGGCCGTTTCATTTC 59.866 57.895 27.15 5.76 33.66 2.17
250 255 1.296056 CTCCGTCGGCCGTTTCATTT 61.296 55.000 27.15 0.00 33.66 2.32
251 256 1.740296 CTCCGTCGGCCGTTTCATT 60.740 57.895 27.15 0.00 33.66 2.57
252 257 2.125673 CTCCGTCGGCCGTTTCAT 60.126 61.111 27.15 0.00 33.66 2.57
253 258 4.367023 CCTCCGTCGGCCGTTTCA 62.367 66.667 27.15 1.49 33.66 2.69
254 259 4.368543 ACCTCCGTCGGCCGTTTC 62.369 66.667 27.15 15.58 33.66 2.78
255 260 4.368543 GACCTCCGTCGGCCGTTT 62.369 66.667 27.15 2.12 33.66 3.60
266 271 6.221659 CCTTGTAGAAAATATACGGACCTCC 58.778 44.000 0.00 0.00 0.00 4.30
267 272 6.183360 ACCCTTGTAGAAAATATACGGACCTC 60.183 42.308 0.00 0.00 0.00 3.85
268 273 5.664457 ACCCTTGTAGAAAATATACGGACCT 59.336 40.000 0.00 0.00 0.00 3.85
269 274 5.922053 ACCCTTGTAGAAAATATACGGACC 58.078 41.667 0.00 0.00 0.00 4.46
270 275 9.551734 AAATACCCTTGTAGAAAATATACGGAC 57.448 33.333 0.00 0.00 0.00 4.79
271 276 9.550406 CAAATACCCTTGTAGAAAATATACGGA 57.450 33.333 0.00 0.00 0.00 4.69
272 277 9.550406 TCAAATACCCTTGTAGAAAATATACGG 57.450 33.333 0.00 0.00 0.00 4.02
276 281 9.408648 CCACTCAAATACCCTTGTAGAAAATAT 57.591 33.333 0.00 0.00 0.00 1.28
277 282 8.607713 TCCACTCAAATACCCTTGTAGAAAATA 58.392 33.333 0.00 0.00 0.00 1.40
278 283 7.466804 TCCACTCAAATACCCTTGTAGAAAAT 58.533 34.615 0.00 0.00 0.00 1.82
279 284 6.843752 TCCACTCAAATACCCTTGTAGAAAA 58.156 36.000 0.00 0.00 0.00 2.29
280 285 6.442541 TCCACTCAAATACCCTTGTAGAAA 57.557 37.500 0.00 0.00 0.00 2.52
281 286 6.442541 TTCCACTCAAATACCCTTGTAGAA 57.557 37.500 0.00 0.00 0.00 2.10
282 287 6.235664 GTTTCCACTCAAATACCCTTGTAGA 58.764 40.000 0.00 0.00 0.00 2.59
283 288 5.121768 CGTTTCCACTCAAATACCCTTGTAG 59.878 44.000 0.00 0.00 0.00 2.74
284 289 4.998672 CGTTTCCACTCAAATACCCTTGTA 59.001 41.667 0.00 0.00 0.00 2.41
285 290 3.818773 CGTTTCCACTCAAATACCCTTGT 59.181 43.478 0.00 0.00 0.00 3.16
286 291 4.069304 TCGTTTCCACTCAAATACCCTTG 58.931 43.478 0.00 0.00 0.00 3.61
287 292 4.070009 GTCGTTTCCACTCAAATACCCTT 58.930 43.478 0.00 0.00 0.00 3.95
288 293 3.071892 TGTCGTTTCCACTCAAATACCCT 59.928 43.478 0.00 0.00 0.00 4.34
289 294 3.404899 TGTCGTTTCCACTCAAATACCC 58.595 45.455 0.00 0.00 0.00 3.69
290 295 5.391629 GGATTGTCGTTTCCACTCAAATACC 60.392 44.000 0.00 0.00 31.99 2.73
291 296 5.180492 TGGATTGTCGTTTCCACTCAAATAC 59.820 40.000 0.00 0.00 37.10 1.89
292 297 5.309638 TGGATTGTCGTTTCCACTCAAATA 58.690 37.500 0.00 0.00 37.10 1.40
293 298 4.141287 TGGATTGTCGTTTCCACTCAAAT 58.859 39.130 0.00 0.00 37.10 2.32
294 299 3.546724 TGGATTGTCGTTTCCACTCAAA 58.453 40.909 0.00 0.00 37.10 2.69
295 300 3.201353 TGGATTGTCGTTTCCACTCAA 57.799 42.857 0.00 0.00 37.10 3.02
296 301 2.920724 TGGATTGTCGTTTCCACTCA 57.079 45.000 0.00 0.00 37.10 3.41
297 302 3.314080 TGTTTGGATTGTCGTTTCCACTC 59.686 43.478 0.00 0.00 41.65 3.51
298 303 3.283751 TGTTTGGATTGTCGTTTCCACT 58.716 40.909 0.00 0.00 41.65 4.00
299 304 3.701532 TGTTTGGATTGTCGTTTCCAC 57.298 42.857 0.00 0.00 41.65 4.02
300 305 3.551863 GCATGTTTGGATTGTCGTTTCCA 60.552 43.478 0.00 0.00 40.24 3.53
301 306 2.986479 GCATGTTTGGATTGTCGTTTCC 59.014 45.455 0.00 0.00 0.00 3.13
302 307 2.986479 GGCATGTTTGGATTGTCGTTTC 59.014 45.455 0.00 0.00 0.00 2.78
303 308 2.288763 GGGCATGTTTGGATTGTCGTTT 60.289 45.455 0.00 0.00 0.00 3.60
304 309 1.272212 GGGCATGTTTGGATTGTCGTT 59.728 47.619 0.00 0.00 0.00 3.85
305 310 0.887933 GGGCATGTTTGGATTGTCGT 59.112 50.000 0.00 0.00 0.00 4.34
306 311 1.176527 AGGGCATGTTTGGATTGTCG 58.823 50.000 0.00 0.00 0.00 4.35
307 312 4.016444 TCTAAGGGCATGTTTGGATTGTC 58.984 43.478 0.00 0.00 0.00 3.18
308 313 4.019174 CTCTAAGGGCATGTTTGGATTGT 58.981 43.478 0.00 0.00 0.00 2.71
309 314 3.382546 CCTCTAAGGGCATGTTTGGATTG 59.617 47.826 0.00 0.00 0.00 2.67
310 315 3.011708 ACCTCTAAGGGCATGTTTGGATT 59.988 43.478 0.00 0.00 40.58 3.01
311 316 2.582636 ACCTCTAAGGGCATGTTTGGAT 59.417 45.455 0.00 0.00 40.58 3.41
312 317 1.992557 ACCTCTAAGGGCATGTTTGGA 59.007 47.619 0.00 0.00 40.58 3.53
313 318 2.514458 ACCTCTAAGGGCATGTTTGG 57.486 50.000 0.00 0.00 40.58 3.28
314 319 4.949856 ACAATACCTCTAAGGGCATGTTTG 59.050 41.667 0.00 0.00 40.58 2.93
315 320 4.949856 CACAATACCTCTAAGGGCATGTTT 59.050 41.667 0.00 0.00 40.58 2.83
316 321 4.227300 TCACAATACCTCTAAGGGCATGTT 59.773 41.667 0.00 0.00 40.58 2.71
317 322 3.780294 TCACAATACCTCTAAGGGCATGT 59.220 43.478 0.00 0.00 40.58 3.21
318 323 4.422073 TCACAATACCTCTAAGGGCATG 57.578 45.455 0.00 0.00 40.58 4.06
319 324 5.450818 TTTCACAATACCTCTAAGGGCAT 57.549 39.130 0.00 0.00 40.58 4.40
320 325 4.919774 TTTCACAATACCTCTAAGGGCA 57.080 40.909 0.00 0.00 40.58 5.36
321 326 5.437060 TGATTTCACAATACCTCTAAGGGC 58.563 41.667 0.00 0.00 40.58 5.19
322 327 7.512992 AGATGATTTCACAATACCTCTAAGGG 58.487 38.462 0.00 0.00 40.58 3.95
323 328 8.206867 TGAGATGATTTCACAATACCTCTAAGG 58.793 37.037 0.00 0.00 42.49 2.69
324 329 9.039870 GTGAGATGATTTCACAATACCTCTAAG 57.960 37.037 10.82 0.00 43.41 2.18
325 330 7.706607 CGTGAGATGATTTCACAATACCTCTAA 59.293 37.037 15.21 0.00 43.98 2.10
326 331 7.147897 ACGTGAGATGATTTCACAATACCTCTA 60.148 37.037 15.21 0.00 43.98 2.43
328 333 5.812642 ACGTGAGATGATTTCACAATACCTC 59.187 40.000 15.21 0.00 43.98 3.85
330 335 5.006746 GGACGTGAGATGATTTCACAATACC 59.993 44.000 15.21 8.75 43.98 2.73
337 342 3.368427 GGTGAGGACGTGAGATGATTTCA 60.368 47.826 0.00 0.00 0.00 2.69
345 350 2.753452 GTTCATAGGTGAGGACGTGAGA 59.247 50.000 0.00 0.00 35.39 3.27
350 355 2.159085 GGGAAGTTCATAGGTGAGGACG 60.159 54.545 5.01 0.00 35.39 4.79
351 356 2.170817 GGGGAAGTTCATAGGTGAGGAC 59.829 54.545 5.01 0.00 35.39 3.85
355 360 6.906901 ACTTATTAGGGGAAGTTCATAGGTGA 59.093 38.462 5.01 0.00 31.83 4.02
356 361 7.138054 ACTTATTAGGGGAAGTTCATAGGTG 57.862 40.000 5.01 0.00 31.83 4.00
358 363 8.935741 ACTAACTTATTAGGGGAAGTTCATAGG 58.064 37.037 5.01 0.00 43.20 2.57
362 367 9.330220 ACTTACTAACTTATTAGGGGAAGTTCA 57.670 33.333 5.01 0.00 43.20 3.18
364 369 9.955102 CAACTTACTAACTTATTAGGGGAAGTT 57.045 33.333 13.02 13.02 45.48 2.66
365 370 9.109246 ACAACTTACTAACTTATTAGGGGAAGT 57.891 33.333 0.00 0.00 41.98 3.01
369 374 9.774413 CCATACAACTTACTAACTTATTAGGGG 57.226 37.037 0.00 0.00 41.98 4.79
370 375 9.774413 CCCATACAACTTACTAACTTATTAGGG 57.226 37.037 0.00 0.00 41.98 3.53
371 376 9.269453 GCCCATACAACTTACTAACTTATTAGG 57.731 37.037 0.00 0.00 41.98 2.69
372 377 9.826574 TGCCCATACAACTTACTAACTTATTAG 57.173 33.333 0.00 0.00 43.14 1.73
374 379 9.338622 GATGCCCATACAACTTACTAACTTATT 57.661 33.333 0.00 0.00 0.00 1.40
375 380 8.714906 AGATGCCCATACAACTTACTAACTTAT 58.285 33.333 0.00 0.00 0.00 1.73
376 381 8.086143 AGATGCCCATACAACTTACTAACTTA 57.914 34.615 0.00 0.00 0.00 2.24
377 382 6.958767 AGATGCCCATACAACTTACTAACTT 58.041 36.000 0.00 0.00 0.00 2.66
378 383 6.561519 AGATGCCCATACAACTTACTAACT 57.438 37.500 0.00 0.00 0.00 2.24
379 384 5.462398 CGAGATGCCCATACAACTTACTAAC 59.538 44.000 0.00 0.00 0.00 2.34
380 385 5.128171 ACGAGATGCCCATACAACTTACTAA 59.872 40.000 0.00 0.00 0.00 2.24
381 386 4.647853 ACGAGATGCCCATACAACTTACTA 59.352 41.667 0.00 0.00 0.00 1.82
382 387 3.451178 ACGAGATGCCCATACAACTTACT 59.549 43.478 0.00 0.00 0.00 2.24
383 388 3.793559 ACGAGATGCCCATACAACTTAC 58.206 45.455 0.00 0.00 0.00 2.34
384 389 5.601583 TTACGAGATGCCCATACAACTTA 57.398 39.130 0.00 0.00 0.00 2.24
385 390 4.481368 TTACGAGATGCCCATACAACTT 57.519 40.909 0.00 0.00 0.00 2.66
386 391 4.481368 TTTACGAGATGCCCATACAACT 57.519 40.909 0.00 0.00 0.00 3.16
387 392 4.495844 GCTTTTACGAGATGCCCATACAAC 60.496 45.833 0.00 0.00 0.00 3.32
388 393 3.625764 GCTTTTACGAGATGCCCATACAA 59.374 43.478 0.00 0.00 0.00 2.41
389 394 3.202906 GCTTTTACGAGATGCCCATACA 58.797 45.455 0.00 0.00 0.00 2.29
390 395 3.202906 TGCTTTTACGAGATGCCCATAC 58.797 45.455 0.00 0.00 0.00 2.39
423 428 1.280421 AGCATCTCCAACAGAACTCCC 59.720 52.381 0.00 0.00 33.62 4.30
424 429 2.626840 GAGCATCTCCAACAGAACTCC 58.373 52.381 0.00 0.00 34.44 3.85
537 546 2.866156 CTCGCATGTGTATCCAAATCGT 59.134 45.455 6.09 0.00 0.00 3.73
712 730 1.588082 CAATGGCGCCAGCTTTCTT 59.412 52.632 35.36 20.10 44.37 2.52
715 733 2.601367 ACCAATGGCGCCAGCTTT 60.601 55.556 35.36 21.72 44.37 3.51
716 734 3.376078 CACCAATGGCGCCAGCTT 61.376 61.111 35.36 22.52 44.37 3.74
740 765 1.300233 CTAAGCTCCGCATCGTCCC 60.300 63.158 0.00 0.00 0.00 4.46
747 772 0.748005 GGAAATGGCTAAGCTCCGCA 60.748 55.000 9.11 0.00 0.00 5.69
760 789 3.005472 CCCAGCAATCTAGCATGGAAATG 59.995 47.826 0.00 0.00 35.91 2.32
877 906 0.829990 TGTGAGCCTGTGACTGTGAA 59.170 50.000 0.00 0.00 0.00 3.18
933 965 2.203126 CGATGGAGGGCTTGGAGC 60.203 66.667 0.00 0.00 41.46 4.70
934 966 2.066393 TCCGATGGAGGGCTTGGAG 61.066 63.158 0.00 0.00 0.00 3.86
952 984 6.409810 GCAAGGGAATTTATAGAAGGAGGAGT 60.410 42.308 0.00 0.00 0.00 3.85
956 988 6.709846 CAGAGCAAGGGAATTTATAGAAGGAG 59.290 42.308 0.00 0.00 0.00 3.69
957 989 6.595682 CAGAGCAAGGGAATTTATAGAAGGA 58.404 40.000 0.00 0.00 0.00 3.36
961 993 5.372343 TGCAGAGCAAGGGAATTTATAGA 57.628 39.130 0.00 0.00 34.76 1.98
972 1004 2.290916 CAGATTAGCATGCAGAGCAAGG 59.709 50.000 21.98 1.00 43.62 3.61
1034 1079 1.294659 CCGTGCCTCTTCTTCAGTGC 61.295 60.000 0.00 0.00 0.00 4.40
1080 1133 1.873591 CGAACACAAGAAGACCCTTGG 59.126 52.381 8.29 1.11 45.76 3.61
1117 1170 2.727647 GCGACGAGGATAGCAGCG 60.728 66.667 0.00 0.00 0.00 5.18
1164 1217 1.226717 GCTCCGAGGAGTTAGTGCG 60.227 63.158 19.22 0.00 43.70 5.34
1216 1270 1.917273 TAGCCTAATGACGCGTTGAC 58.083 50.000 15.53 0.04 0.00 3.18
1217 1271 2.164827 TCTTAGCCTAATGACGCGTTGA 59.835 45.455 15.53 3.23 0.00 3.18
1218 1272 2.536365 TCTTAGCCTAATGACGCGTTG 58.464 47.619 15.53 1.55 0.00 4.10
1219 1273 2.953466 TCTTAGCCTAATGACGCGTT 57.047 45.000 15.53 0.00 0.00 4.84
1220 1274 2.928116 GTTTCTTAGCCTAATGACGCGT 59.072 45.455 13.85 13.85 0.00 6.01
1221 1275 3.187700 AGTTTCTTAGCCTAATGACGCG 58.812 45.455 3.53 3.53 0.00 6.01
1222 1276 4.728021 GCAAGTTTCTTAGCCTAATGACGC 60.728 45.833 0.00 0.00 0.00 5.19
1302 1360 4.583871 GGCTTCATTCTCTTCCTTCTTGA 58.416 43.478 0.00 0.00 0.00 3.02
1405 1472 3.528370 CCACCGCCTCCTCCGTAG 61.528 72.222 0.00 0.00 0.00 3.51
1406 1473 4.051167 TCCACCGCCTCCTCCGTA 62.051 66.667 0.00 0.00 0.00 4.02
1410 1477 1.684734 TAACCTCCACCGCCTCCTC 60.685 63.158 0.00 0.00 0.00 3.71
1411 1478 1.988406 GTAACCTCCACCGCCTCCT 60.988 63.158 0.00 0.00 0.00 3.69
1412 1479 2.582978 GTAACCTCCACCGCCTCC 59.417 66.667 0.00 0.00 0.00 4.30
1413 1480 2.183555 CGTAACCTCCACCGCCTC 59.816 66.667 0.00 0.00 0.00 4.70
1414 1481 3.387947 CCGTAACCTCCACCGCCT 61.388 66.667 0.00 0.00 0.00 5.52
1417 1484 4.807039 CCGCCGTAACCTCCACCG 62.807 72.222 0.00 0.00 0.00 4.94
1893 2101 4.404098 TCCTCCGCCGCCTTTTCC 62.404 66.667 0.00 0.00 0.00 3.13
1894 2102 2.820037 CTCCTCCGCCGCCTTTTC 60.820 66.667 0.00 0.00 0.00 2.29
1895 2103 4.410400 CCTCCTCCGCCGCCTTTT 62.410 66.667 0.00 0.00 0.00 2.27
2177 2745 1.432657 GTAGAGTTCGACGGAGGGC 59.567 63.158 0.00 0.00 0.00 5.19
2182 2750 0.179171 ATGCACGTAGAGTTCGACGG 60.179 55.000 16.87 8.60 46.65 4.79
2331 2909 3.437049 GGCATGTGTTCTTCTACAAGGTC 59.563 47.826 0.00 0.00 0.00 3.85
2332 2910 3.073062 AGGCATGTGTTCTTCTACAAGGT 59.927 43.478 0.00 0.00 0.00 3.50
2333 2911 3.679389 AGGCATGTGTTCTTCTACAAGG 58.321 45.455 0.00 0.00 0.00 3.61
2341 2919 3.987404 GCGGAGGCATGTGTTCTT 58.013 55.556 0.00 0.00 39.62 2.52
2353 2931 2.266055 GAACACAGAGGGGCGGAG 59.734 66.667 0.00 0.00 0.00 4.63
2358 2936 3.771577 AACTTACAGAACACAGAGGGG 57.228 47.619 0.00 0.00 0.00 4.79
2372 2950 7.113965 CGATACGGGACATACATACAAACTTAC 59.886 40.741 0.00 0.00 0.00 2.34
2373 2951 7.013178 TCGATACGGGACATACATACAAACTTA 59.987 37.037 0.00 0.00 0.00 2.24
2376 2954 5.522456 TCGATACGGGACATACATACAAAC 58.478 41.667 0.00 0.00 0.00 2.93
2377 2955 5.771153 TCGATACGGGACATACATACAAA 57.229 39.130 0.00 0.00 0.00 2.83
2378 2956 5.474189 TCATCGATACGGGACATACATACAA 59.526 40.000 0.00 0.00 0.00 2.41
2379 2957 5.005094 TCATCGATACGGGACATACATACA 58.995 41.667 0.00 0.00 0.00 2.29
2382 2960 5.661056 ATTCATCGATACGGGACATACAT 57.339 39.130 0.00 0.00 0.00 2.29
2531 3109 3.944650 ACCCCTTTTTGCAACATTGAAAC 59.055 39.130 0.00 0.00 0.00 2.78
2602 3467 1.298788 CGTGACCCGTTTTTGCACC 60.299 57.895 0.00 0.00 0.00 5.01
2620 3485 5.445964 TCTAGCAAACCCAATTAATCCCTC 58.554 41.667 0.00 0.00 0.00 4.30
2621 3486 5.466127 TCTAGCAAACCCAATTAATCCCT 57.534 39.130 0.00 0.00 0.00 4.20
2632 3497 1.673168 CTGCCAGATCTAGCAAACCC 58.327 55.000 16.70 0.00 38.82 4.11
2638 3503 0.881159 CTGCAGCTGCCAGATCTAGC 60.881 60.000 34.64 6.15 41.18 3.42
2641 3506 2.124653 GCTGCAGCTGCCAGATCT 60.125 61.111 34.64 0.00 41.18 2.75
2653 3518 1.737735 CAGTCGATCGGTTGCTGCA 60.738 57.895 16.41 0.00 0.00 4.41
2654 3519 1.687494 GACAGTCGATCGGTTGCTGC 61.687 60.000 16.41 10.56 0.00 5.25
2655 3520 0.388520 TGACAGTCGATCGGTTGCTG 60.389 55.000 16.41 18.69 0.00 4.41
2701 3595 2.735663 CGCTTTATAGGCATCAGCTGAG 59.264 50.000 22.96 14.69 41.70 3.35
2704 3598 1.202687 TGCGCTTTATAGGCATCAGCT 60.203 47.619 9.73 0.00 41.70 4.24
2706 3600 2.350197 GCTTGCGCTTTATAGGCATCAG 60.350 50.000 9.73 0.00 36.44 2.90
2736 3631 1.555075 GATCCAAGGACAGTGCCACTA 59.445 52.381 0.00 0.00 0.00 2.74
2738 3633 0.678048 GGATCCAAGGACAGTGCCAC 60.678 60.000 6.95 0.00 0.00 5.01
2741 3636 1.450312 CCGGATCCAAGGACAGTGC 60.450 63.158 13.41 0.00 0.00 4.40
2742 3637 1.450312 GCCGGATCCAAGGACAGTG 60.450 63.158 13.41 0.00 0.00 3.66
2743 3638 1.201429 AAGCCGGATCCAAGGACAGT 61.201 55.000 13.41 0.00 0.00 3.55
2744 3639 0.745845 CAAGCCGGATCCAAGGACAG 60.746 60.000 13.41 0.00 0.00 3.51
2745 3640 1.299648 CAAGCCGGATCCAAGGACA 59.700 57.895 13.41 0.00 0.00 4.02
2746 3641 0.744771 GACAAGCCGGATCCAAGGAC 60.745 60.000 13.41 2.63 0.00 3.85
2747 3642 0.909610 AGACAAGCCGGATCCAAGGA 60.910 55.000 13.41 0.00 0.00 3.36
2748 3643 0.745845 CAGACAAGCCGGATCCAAGG 60.746 60.000 13.41 6.96 0.00 3.61
2749 3644 1.372087 GCAGACAAGCCGGATCCAAG 61.372 60.000 13.41 3.20 0.00 3.61
2750 3645 1.377202 GCAGACAAGCCGGATCCAA 60.377 57.895 13.41 0.00 0.00 3.53
2751 3646 1.841302 AAGCAGACAAGCCGGATCCA 61.841 55.000 13.41 0.00 34.23 3.41
2752 3647 1.078143 AAGCAGACAAGCCGGATCC 60.078 57.895 5.05 0.00 34.23 3.36
2753 3648 1.092345 GGAAGCAGACAAGCCGGATC 61.092 60.000 5.05 0.00 34.23 3.36
2754 3649 1.078143 GGAAGCAGACAAGCCGGAT 60.078 57.895 5.05 0.00 34.23 4.18
2755 3650 1.768684 AAGGAAGCAGACAAGCCGGA 61.769 55.000 5.05 0.00 34.23 5.14
2756 3651 1.301677 GAAGGAAGCAGACAAGCCGG 61.302 60.000 0.00 0.00 34.23 6.13
2757 3652 1.301677 GGAAGGAAGCAGACAAGCCG 61.302 60.000 0.00 0.00 34.23 5.52
2758 3653 0.962855 GGGAAGGAAGCAGACAAGCC 60.963 60.000 0.00 0.00 34.23 4.35
2759 3654 0.250901 TGGGAAGGAAGCAGACAAGC 60.251 55.000 0.00 0.00 0.00 4.01
2760 3655 2.089980 CATGGGAAGGAAGCAGACAAG 58.910 52.381 0.00 0.00 0.00 3.16
2761 3656 1.887956 GCATGGGAAGGAAGCAGACAA 60.888 52.381 0.00 0.00 0.00 3.18
2762 3657 0.322816 GCATGGGAAGGAAGCAGACA 60.323 55.000 0.00 0.00 0.00 3.41
2763 3658 0.034670 AGCATGGGAAGGAAGCAGAC 60.035 55.000 0.00 0.00 0.00 3.51
2764 3659 0.700564 AAGCATGGGAAGGAAGCAGA 59.299 50.000 0.00 0.00 0.00 4.26
2765 3660 1.475682 GAAAGCATGGGAAGGAAGCAG 59.524 52.381 0.00 0.00 0.00 4.24
2766 3661 1.203038 TGAAAGCATGGGAAGGAAGCA 60.203 47.619 0.00 0.00 0.00 3.91
2767 3662 1.549203 TGAAAGCATGGGAAGGAAGC 58.451 50.000 0.00 0.00 0.00 3.86
2768 3663 2.692041 GGATGAAAGCATGGGAAGGAAG 59.308 50.000 0.00 0.00 34.11 3.46
2769 3664 2.738743 GGATGAAAGCATGGGAAGGAA 58.261 47.619 0.00 0.00 34.11 3.36
2770 3665 1.408683 CGGATGAAAGCATGGGAAGGA 60.409 52.381 0.00 0.00 34.11 3.36
2771 3666 1.027357 CGGATGAAAGCATGGGAAGG 58.973 55.000 0.00 0.00 34.11 3.46
2772 3667 1.402968 CACGGATGAAAGCATGGGAAG 59.597 52.381 0.00 0.00 34.11 3.46
2773 3668 1.462616 CACGGATGAAAGCATGGGAA 58.537 50.000 0.00 0.00 34.11 3.97
2774 3669 1.031571 GCACGGATGAAAGCATGGGA 61.032 55.000 0.00 0.00 34.11 4.37
2775 3670 1.033746 AGCACGGATGAAAGCATGGG 61.034 55.000 0.00 0.00 34.11 4.00
2776 3671 0.379669 GAGCACGGATGAAAGCATGG 59.620 55.000 0.00 0.00 34.11 3.66
2777 3672 0.379669 GGAGCACGGATGAAAGCATG 59.620 55.000 0.00 0.00 34.11 4.06
2778 3673 0.749454 GGGAGCACGGATGAAAGCAT 60.749 55.000 0.00 0.00 37.47 3.79
2779 3674 1.377202 GGGAGCACGGATGAAAGCA 60.377 57.895 0.00 0.00 0.00 3.91
2780 3675 1.377202 TGGGAGCACGGATGAAAGC 60.377 57.895 0.00 0.00 0.00 3.51
2781 3676 0.036010 AGTGGGAGCACGGATGAAAG 60.036 55.000 0.00 0.00 0.00 2.62
2782 3677 1.066430 GTAGTGGGAGCACGGATGAAA 60.066 52.381 0.00 0.00 0.00 2.69
2783 3678 0.535335 GTAGTGGGAGCACGGATGAA 59.465 55.000 0.00 0.00 0.00 2.57
2784 3679 0.613572 TGTAGTGGGAGCACGGATGA 60.614 55.000 0.00 0.00 0.00 2.92
2785 3680 0.465705 ATGTAGTGGGAGCACGGATG 59.534 55.000 0.00 0.00 0.00 3.51
2786 3681 0.753262 GATGTAGTGGGAGCACGGAT 59.247 55.000 0.00 0.00 0.00 4.18
2787 3682 1.327690 GGATGTAGTGGGAGCACGGA 61.328 60.000 0.00 0.00 0.00 4.69
2788 3683 1.144057 GGATGTAGTGGGAGCACGG 59.856 63.158 0.00 0.00 0.00 4.94
2789 3684 1.067212 GTAGGATGTAGTGGGAGCACG 59.933 57.143 0.00 0.00 0.00 5.34
2790 3685 1.067212 CGTAGGATGTAGTGGGAGCAC 59.933 57.143 0.00 0.00 0.00 4.40
2791 3686 1.399714 CGTAGGATGTAGTGGGAGCA 58.600 55.000 0.00 0.00 0.00 4.26
2821 3716 9.421399 GGGGGAATGATTAGATTAGAAAGAAAA 57.579 33.333 0.00 0.00 0.00 2.29
2822 3717 8.996651 GGGGGAATGATTAGATTAGAAAGAAA 57.003 34.615 0.00 0.00 0.00 2.52
2847 3742 1.342975 CCCCACCCCCTTAAAATCAGG 60.343 57.143 0.00 0.00 0.00 3.86
2848 3743 1.964830 GCCCCACCCCCTTAAAATCAG 60.965 57.143 0.00 0.00 0.00 2.90
2849 3744 0.041982 GCCCCACCCCCTTAAAATCA 59.958 55.000 0.00 0.00 0.00 2.57
2850 3745 0.689745 GGCCCCACCCCCTTAAAATC 60.690 60.000 0.00 0.00 0.00 2.17
2851 3746 1.394557 GGCCCCACCCCCTTAAAAT 59.605 57.895 0.00 0.00 0.00 1.82
2852 3747 2.863275 GGCCCCACCCCCTTAAAA 59.137 61.111 0.00 0.00 0.00 1.52
2853 3748 3.663806 CGGCCCCACCCCCTTAAA 61.664 66.667 0.00 0.00 33.26 1.52
2867 3762 1.273886 TGAAACAAAATAAGGCCCGGC 59.726 47.619 0.00 0.00 0.00 6.13
2868 3763 3.669251 TTGAAACAAAATAAGGCCCGG 57.331 42.857 0.00 0.00 0.00 5.73
2869 3764 4.815269 TGATTGAAACAAAATAAGGCCCG 58.185 39.130 0.00 0.00 0.00 6.13
2870 3765 7.686438 ATTTGATTGAAACAAAATAAGGCCC 57.314 32.000 4.74 0.00 39.95 5.80
2877 3772 8.281893 CGTGGCTTTATTTGATTGAAACAAAAT 58.718 29.630 4.74 0.00 39.95 1.82
2878 3773 7.278868 ACGTGGCTTTATTTGATTGAAACAAAA 59.721 29.630 4.74 0.00 39.95 2.44
2879 3774 6.758886 ACGTGGCTTTATTTGATTGAAACAAA 59.241 30.769 3.11 3.11 40.62 2.83
2880 3775 6.276847 ACGTGGCTTTATTTGATTGAAACAA 58.723 32.000 0.00 0.00 0.00 2.83
2881 3776 5.837437 ACGTGGCTTTATTTGATTGAAACA 58.163 33.333 0.00 0.00 0.00 2.83
2882 3777 6.032042 CGTACGTGGCTTTATTTGATTGAAAC 59.968 38.462 7.22 0.00 0.00 2.78
2883 3778 6.081049 CGTACGTGGCTTTATTTGATTGAAA 58.919 36.000 7.22 0.00 0.00 2.69
2884 3779 5.623335 CGTACGTGGCTTTATTTGATTGAA 58.377 37.500 7.22 0.00 0.00 2.69
2885 3780 4.436317 GCGTACGTGGCTTTATTTGATTGA 60.436 41.667 17.90 0.00 0.00 2.57
2886 3781 3.783943 GCGTACGTGGCTTTATTTGATTG 59.216 43.478 17.90 0.00 0.00 2.67
2887 3782 3.484557 CGCGTACGTGGCTTTATTTGATT 60.485 43.478 20.84 0.00 33.53 2.57
2888 3783 2.029970 CGCGTACGTGGCTTTATTTGAT 59.970 45.455 20.84 0.00 33.53 2.57
2889 3784 1.390803 CGCGTACGTGGCTTTATTTGA 59.609 47.619 20.84 0.00 33.53 2.69
2890 3785 1.528198 CCGCGTACGTGGCTTTATTTG 60.528 52.381 32.68 8.14 39.06 2.32
2891 3786 0.722848 CCGCGTACGTGGCTTTATTT 59.277 50.000 32.68 0.00 39.06 1.40
2892 3787 1.085501 CCCGCGTACGTGGCTTTATT 61.086 55.000 36.56 0.00 43.94 1.40
2893 3788 1.519898 CCCGCGTACGTGGCTTTAT 60.520 57.895 36.56 0.00 43.94 1.40
2894 3789 2.125991 CCCGCGTACGTGGCTTTA 60.126 61.111 36.56 0.00 43.94 1.85
2895 3790 3.927163 CTCCCGCGTACGTGGCTTT 62.927 63.158 36.56 0.00 43.94 3.51
2896 3791 4.430765 CTCCCGCGTACGTGGCTT 62.431 66.667 36.56 0.00 43.94 4.35
2903 3798 4.203076 ATCCGTGCTCCCGCGTAC 62.203 66.667 4.92 0.00 43.11 3.67
2904 3799 4.201679 CATCCGTGCTCCCGCGTA 62.202 66.667 4.92 0.00 43.11 4.42
2931 3826 3.435186 GACTTGCCTGCTTCCCGC 61.435 66.667 0.00 0.00 39.77 6.13
2932 3827 1.743252 GAGACTTGCCTGCTTCCCG 60.743 63.158 0.00 0.00 0.00 5.14
2933 3828 1.743252 CGAGACTTGCCTGCTTCCC 60.743 63.158 0.00 0.00 0.00 3.97
2934 3829 1.004440 ACGAGACTTGCCTGCTTCC 60.004 57.895 0.00 0.00 0.00 3.46
2935 3830 1.016653 GGACGAGACTTGCCTGCTTC 61.017 60.000 0.00 0.00 0.00 3.86
2936 3831 1.004440 GGACGAGACTTGCCTGCTT 60.004 57.895 0.00 0.00 0.00 3.91
2937 3832 2.210013 TGGACGAGACTTGCCTGCT 61.210 57.895 0.00 0.00 0.00 4.24
2938 3833 2.029844 GTGGACGAGACTTGCCTGC 61.030 63.158 0.00 0.00 0.00 4.85
2939 3834 0.668706 CAGTGGACGAGACTTGCCTG 60.669 60.000 0.00 0.00 0.00 4.85
2940 3835 1.115930 ACAGTGGACGAGACTTGCCT 61.116 55.000 0.00 0.00 0.00 4.75
2941 3836 0.667792 GACAGTGGACGAGACTTGCC 60.668 60.000 0.00 0.00 0.00 4.52
2942 3837 0.667792 GGACAGTGGACGAGACTTGC 60.668 60.000 0.00 0.00 0.00 4.01
2943 3838 0.962489 AGGACAGTGGACGAGACTTG 59.038 55.000 0.00 0.00 0.00 3.16
2944 3839 1.341531 CAAGGACAGTGGACGAGACTT 59.658 52.381 0.00 0.00 0.00 3.01
2945 3840 0.962489 CAAGGACAGTGGACGAGACT 59.038 55.000 0.00 0.00 0.00 3.24
2946 3841 0.674534 ACAAGGACAGTGGACGAGAC 59.325 55.000 0.00 0.00 0.00 3.36
2947 3842 0.959553 GACAAGGACAGTGGACGAGA 59.040 55.000 0.00 0.00 0.00 4.04
2948 3843 0.038159 GGACAAGGACAGTGGACGAG 60.038 60.000 0.00 0.00 0.00 4.18
2949 3844 0.469331 AGGACAAGGACAGTGGACGA 60.469 55.000 0.00 0.00 0.00 4.20
2950 3845 0.038159 GAGGACAAGGACAGTGGACG 60.038 60.000 0.00 0.00 0.00 4.79
2951 3846 0.038159 CGAGGACAAGGACAGTGGAC 60.038 60.000 0.00 0.00 0.00 4.02
2952 3847 1.185618 CCGAGGACAAGGACAGTGGA 61.186 60.000 0.00 0.00 0.00 4.02
2953 3848 1.293498 CCGAGGACAAGGACAGTGG 59.707 63.158 0.00 0.00 0.00 4.00
2964 3859 2.198304 ATTTCCCTGCCACCGAGGAC 62.198 60.000 0.00 0.00 41.22 3.85
2985 3880 4.993705 TTGAGTTGAGGGTGGAGTAAAT 57.006 40.909 0.00 0.00 0.00 1.40
3000 3895 1.134189 GCTACCGGCCCTTATTGAGTT 60.134 52.381 0.00 0.00 34.27 3.01
3005 3900 2.097036 GTTTTGCTACCGGCCCTTATT 58.903 47.619 0.00 0.00 40.92 1.40
3006 3901 1.758936 GTTTTGCTACCGGCCCTTAT 58.241 50.000 0.00 0.00 40.92 1.73
3007 3902 0.674269 CGTTTTGCTACCGGCCCTTA 60.674 55.000 0.00 0.00 40.92 2.69
3010 3905 1.517210 TTTCGTTTTGCTACCGGCCC 61.517 55.000 0.00 0.00 40.92 5.80
3011 3906 0.311477 TTTTCGTTTTGCTACCGGCC 59.689 50.000 0.00 0.00 40.92 6.13
3013 3908 3.546002 TCATTTTCGTTTTGCTACCGG 57.454 42.857 0.00 0.00 0.00 5.28
3014 3909 3.356658 CGTTCATTTTCGTTTTGCTACCG 59.643 43.478 0.00 0.00 0.00 4.02
3053 3982 1.978455 TTCTGCGGTGGTGTGGAGTT 61.978 55.000 0.00 0.00 0.00 3.01
3054 3983 1.978455 TTTCTGCGGTGGTGTGGAGT 61.978 55.000 0.00 0.00 0.00 3.85
3057 3986 0.240945 GAATTTCTGCGGTGGTGTGG 59.759 55.000 0.00 0.00 0.00 4.17
3058 3987 0.950836 TGAATTTCTGCGGTGGTGTG 59.049 50.000 0.00 0.00 0.00 3.82
3059 3988 1.686355 TTGAATTTCTGCGGTGGTGT 58.314 45.000 0.00 0.00 0.00 4.16
3060 3989 2.791383 TTTGAATTTCTGCGGTGGTG 57.209 45.000 0.00 0.00 0.00 4.17
3069 4013 9.076596 GCTTACATATTCGCTTTTTGAATTTCT 57.923 29.630 0.00 0.00 37.28 2.52
3078 4022 3.936453 TGTCCGCTTACATATTCGCTTTT 59.064 39.130 0.00 0.00 0.00 2.27
3084 4028 5.511088 CGGTTATGTCCGCTTACATATTC 57.489 43.478 8.34 5.97 43.96 1.75
3153 4097 4.330944 TCGAGTTCTAGCAAAACTTCCA 57.669 40.909 0.00 0.00 37.10 3.53
3154 4098 5.668558 TTTCGAGTTCTAGCAAAACTTCC 57.331 39.130 0.00 0.00 37.10 3.46
3155 4099 7.577107 AGATTTTCGAGTTCTAGCAAAACTTC 58.423 34.615 0.00 0.00 37.10 3.01
3156 4100 7.442666 AGAGATTTTCGAGTTCTAGCAAAACTT 59.557 33.333 0.00 0.00 37.10 2.66
3157 4101 6.931840 AGAGATTTTCGAGTTCTAGCAAAACT 59.068 34.615 0.00 0.00 39.61 2.66
3158 4102 7.123160 AGAGATTTTCGAGTTCTAGCAAAAC 57.877 36.000 0.00 0.00 0.00 2.43
3159 4103 8.304596 TCTAGAGATTTTCGAGTTCTAGCAAAA 58.695 33.333 12.21 0.00 38.03 2.44
3160 4104 7.827701 TCTAGAGATTTTCGAGTTCTAGCAAA 58.172 34.615 12.21 0.00 38.03 3.68
3161 4105 7.392494 TCTAGAGATTTTCGAGTTCTAGCAA 57.608 36.000 12.21 0.51 38.03 3.91
3199 4151 7.777095 ACACAACTTTGTTGGTTATGTTGTAT 58.223 30.769 13.86 0.00 43.74 2.29
3224 4182 1.999735 CTTCTCTTCGGTGCGCAATTA 59.000 47.619 14.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.