Multiple sequence alignment - TraesCS2B01G485100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G485100 chr2B 100.000 3701 0 0 1 3701 682220365 682216665 0.000000e+00 6835.0
1 TraesCS2B01G485100 chr2B 76.667 810 143 24 2764 3531 246438262 246437457 1.240000e-109 407.0
2 TraesCS2B01G485100 chr2B 92.308 91 4 2 1 91 508411781 508411868 3.880000e-25 126.0
3 TraesCS2B01G485100 chr2D 93.525 2054 89 15 738 2762 569844623 569842585 0.000000e+00 3016.0
4 TraesCS2B01G485100 chr2D 88.462 1040 84 16 2695 3701 569841883 569840847 0.000000e+00 1223.0
5 TraesCS2B01G485100 chr2D 82.174 460 41 14 223 655 569850458 569850013 1.260000e-94 357.0
6 TraesCS2B01G485100 chr2D 90.385 104 7 3 1 102 608653925 608653823 2.320000e-27 134.0
7 TraesCS2B01G485100 chr2D 100.000 34 0 0 689 722 569844642 569844609 3.090000e-06 63.9
8 TraesCS2B01G485100 chr2A 93.208 1914 80 15 741 2621 709105092 709103196 0.000000e+00 2769.0
9 TraesCS2B01G485100 chr2A 84.071 339 39 10 3229 3552 709097351 709097013 2.780000e-81 313.0
10 TraesCS2B01G485100 chr2A 80.212 283 35 9 416 679 709105572 709105292 3.770000e-45 193.0
11 TraesCS2B01G485100 chr4D 81.841 391 64 5 2996 3380 380140623 380140234 4.610000e-84 322.0
12 TraesCS2B01G485100 chr3D 80.952 378 64 8 2768 3141 488120698 488120325 3.620000e-75 292.0
13 TraesCS2B01G485100 chr3D 83.276 293 43 6 2852 3141 405815101 405814812 7.880000e-67 265.0
14 TraesCS2B01G485100 chr3D 83.643 269 41 3 2766 3031 180245847 180245579 2.210000e-62 250.0
15 TraesCS2B01G485100 chr3D 77.240 413 73 7 3138 3531 429314030 429314440 4.810000e-54 222.0
16 TraesCS2B01G485100 chr3D 92.553 94 6 1 1 93 154009656 154009749 2.320000e-27 134.0
17 TraesCS2B01G485100 chr6D 80.811 370 64 7 2765 3129 9939316 9939683 2.180000e-72 283.0
18 TraesCS2B01G485100 chr6D 72.899 845 160 34 2758 3541 355157869 355157033 1.030000e-55 228.0
19 TraesCS2B01G485100 chr7A 76.773 564 94 15 2998 3529 523625816 523625258 7.830000e-72 281.0
20 TraesCS2B01G485100 chr7A 77.437 359 74 7 2765 3118 50264562 50264918 1.350000e-49 207.0
21 TraesCS2B01G485100 chr7A 81.443 97 17 1 94 190 670945373 670945468 1.100000e-10 78.7
22 TraesCS2B01G485100 chr7A 81.443 97 17 1 94 190 670945628 670945723 1.100000e-10 78.7
23 TraesCS2B01G485100 chr5B 78.118 425 68 11 3130 3531 281148623 281148201 2.850000e-61 246.0
24 TraesCS2B01G485100 chr5B 92.632 95 6 1 1 94 649817497 649817403 6.450000e-28 135.0
25 TraesCS2B01G485100 chr5B 91.489 94 7 1 1 93 599990826 599990733 1.080000e-25 128.0
26 TraesCS2B01G485100 chr5B 81.481 108 17 3 85 191 573432363 573432258 6.590000e-13 86.1
27 TraesCS2B01G485100 chr7D 77.934 426 68 10 3130 3531 570646361 570646784 3.690000e-60 243.0
28 TraesCS2B01G485100 chr7D 77.315 432 63 17 2982 3380 244483274 244482845 4.810000e-54 222.0
29 TraesCS2B01G485100 chr5D 80.000 270 49 3 2876 3141 473926835 473927103 1.050000e-45 195.0
30 TraesCS2B01G485100 chr5D 92.308 91 5 2 85 175 219259353 219259265 1.080000e-25 128.0
31 TraesCS2B01G485100 chr5D 83.908 87 14 0 89 175 375732478 375732564 2.370000e-12 84.2
32 TraesCS2B01G485100 chr1D 78.477 302 59 4 3080 3378 342871238 342871536 3.770000e-45 193.0
33 TraesCS2B01G485100 chr1D 92.553 94 6 1 1 93 440709416 440709323 2.320000e-27 134.0
34 TraesCS2B01G485100 chr1D 80.000 180 34 2 2766 2944 411044695 411044517 8.340000e-27 132.0
35 TraesCS2B01G485100 chr1D 85.981 107 15 0 105 211 109938263 109938369 8.400000e-22 115.0
36 TraesCS2B01G485100 chr1D 83.951 81 13 0 90 170 252853211 252853131 1.100000e-10 78.7
37 TraesCS2B01G485100 chr1D 92.500 40 3 0 2558 2597 427006878 427006917 1.440000e-04 58.4
38 TraesCS2B01G485100 chr5A 91.489 94 7 1 1 93 32877576 32877669 1.080000e-25 128.0
39 TraesCS2B01G485100 chr7B 88.462 104 10 2 1 102 562726491 562726594 1.400000e-24 124.0
40 TraesCS2B01G485100 chr7B 84.000 100 16 0 90 189 120724124 120724025 3.040000e-16 97.1
41 TraesCS2B01G485100 chr1B 90.426 94 8 1 1 93 588793083 588793176 5.020000e-24 122.0
42 TraesCS2B01G485100 chr1B 90.244 41 4 0 2557 2597 577038410 577038450 2.000000e-03 54.7
43 TraesCS2B01G485100 chr4B 91.781 73 6 0 119 191 74669864 74669936 6.540000e-18 102.0
44 TraesCS2B01G485100 chr3A 72.826 276 56 17 2330 2600 142924515 142924776 3.960000e-10 76.8
45 TraesCS2B01G485100 chr3A 100.000 30 0 0 2571 2600 143023306 143023335 5.160000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G485100 chr2B 682216665 682220365 3700 True 6835.0 6835 100.000000 1 3701 1 chr2B.!!$R2 3700
1 TraesCS2B01G485100 chr2B 246437457 246438262 805 True 407.0 407 76.667000 2764 3531 1 chr2B.!!$R1 767
2 TraesCS2B01G485100 chr2D 569840847 569844642 3795 True 1434.3 3016 93.995667 689 3701 3 chr2D.!!$R3 3012
3 TraesCS2B01G485100 chr2A 709103196 709105572 2376 True 1481.0 2769 86.710000 416 2621 2 chr2A.!!$R2 2205
4 TraesCS2B01G485100 chr6D 355157033 355157869 836 True 228.0 228 72.899000 2758 3541 1 chr6D.!!$R1 783
5 TraesCS2B01G485100 chr7A 523625258 523625816 558 True 281.0 281 76.773000 2998 3529 1 chr7A.!!$R1 531

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
130 131 0.036671 AGGTTCGTTTAAGGAGCCCG 60.037 55.0 15.06 0.00 34.48 6.13 F
162 163 0.038526 AATCGTGACCGGTCAGTGAC 60.039 55.0 37.04 23.44 40.75 3.67 F
586 588 0.110192 GAGCTTTGTTCGGCCTTTCG 60.110 55.0 0.00 0.00 0.00 3.46 F
2215 2434 0.613292 TGGTCACAGAGGAGGAGCTC 60.613 60.0 4.71 4.71 0.00 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1060 1272 0.961358 AGAACGAGTGGGACGAGGAG 60.961 60.0 0.00 0.00 34.70 3.69 R
1678 1890 1.021390 CCCAGGAGCGACATGTTGAC 61.021 60.0 17.70 9.37 0.00 3.18 R
2535 2754 1.795768 TCATCTCAACGGCAGTGTTC 58.204 50.0 0.00 0.00 0.00 3.18 R
3261 4304 0.250338 GTCGTGCCCTTCTTGAAGGT 60.250 55.0 23.12 0.00 38.28 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.410400 GTTGGAGGGTGGCGGGAG 62.410 72.222 0.00 0.00 0.00 4.30
25 26 4.779733 GTGGCGGGAGGAGGAGGA 62.780 72.222 0.00 0.00 0.00 3.71
26 27 4.005978 TGGCGGGAGGAGGAGGAA 62.006 66.667 0.00 0.00 0.00 3.36
27 28 3.157949 GGCGGGAGGAGGAGGAAG 61.158 72.222 0.00 0.00 0.00 3.46
28 29 3.157949 GCGGGAGGAGGAGGAAGG 61.158 72.222 0.00 0.00 0.00 3.46
29 30 2.364961 CGGGAGGAGGAGGAAGGT 59.635 66.667 0.00 0.00 0.00 3.50
30 31 1.306226 CGGGAGGAGGAGGAAGGTT 60.306 63.158 0.00 0.00 0.00 3.50
31 32 0.910088 CGGGAGGAGGAGGAAGGTTT 60.910 60.000 0.00 0.00 0.00 3.27
32 33 0.621082 GGGAGGAGGAGGAAGGTTTG 59.379 60.000 0.00 0.00 0.00 2.93
33 34 1.657804 GGAGGAGGAGGAAGGTTTGA 58.342 55.000 0.00 0.00 0.00 2.69
34 35 2.200955 GGAGGAGGAGGAAGGTTTGAT 58.799 52.381 0.00 0.00 0.00 2.57
35 36 2.092699 GGAGGAGGAGGAAGGTTTGATG 60.093 54.545 0.00 0.00 0.00 3.07
36 37 1.918957 AGGAGGAGGAAGGTTTGATGG 59.081 52.381 0.00 0.00 0.00 3.51
37 38 1.916181 GGAGGAGGAAGGTTTGATGGA 59.084 52.381 0.00 0.00 0.00 3.41
38 39 2.511637 GGAGGAGGAAGGTTTGATGGAT 59.488 50.000 0.00 0.00 0.00 3.41
39 40 3.053320 GGAGGAGGAAGGTTTGATGGATT 60.053 47.826 0.00 0.00 0.00 3.01
40 41 4.570719 GGAGGAGGAAGGTTTGATGGATTT 60.571 45.833 0.00 0.00 0.00 2.17
41 42 4.347607 AGGAGGAAGGTTTGATGGATTTG 58.652 43.478 0.00 0.00 0.00 2.32
42 43 4.044571 AGGAGGAAGGTTTGATGGATTTGA 59.955 41.667 0.00 0.00 0.00 2.69
43 44 4.958581 GGAGGAAGGTTTGATGGATTTGAT 59.041 41.667 0.00 0.00 0.00 2.57
44 45 5.163478 GGAGGAAGGTTTGATGGATTTGATG 60.163 44.000 0.00 0.00 0.00 3.07
45 46 4.161001 AGGAAGGTTTGATGGATTTGATGC 59.839 41.667 0.00 0.00 0.00 3.91
46 47 4.081531 GGAAGGTTTGATGGATTTGATGCA 60.082 41.667 0.00 0.00 34.26 3.96
47 48 5.481105 GAAGGTTTGATGGATTTGATGCAA 58.519 37.500 0.00 0.00 33.18 4.08
48 49 5.687166 AGGTTTGATGGATTTGATGCAAT 57.313 34.783 0.00 0.00 33.18 3.56
49 50 6.057321 AGGTTTGATGGATTTGATGCAATT 57.943 33.333 0.00 0.00 33.18 2.32
50 51 6.478129 AGGTTTGATGGATTTGATGCAATTT 58.522 32.000 0.00 0.00 33.18 1.82
51 52 6.373216 AGGTTTGATGGATTTGATGCAATTTG 59.627 34.615 0.00 0.00 33.18 2.32
52 53 6.403855 GGTTTGATGGATTTGATGCAATTTGG 60.404 38.462 0.00 0.00 33.18 3.28
53 54 4.771903 TGATGGATTTGATGCAATTTGGG 58.228 39.130 0.00 0.00 33.18 4.12
54 55 3.630892 TGGATTTGATGCAATTTGGGG 57.369 42.857 0.00 0.00 0.00 4.96
55 56 2.911636 TGGATTTGATGCAATTTGGGGT 59.088 40.909 0.00 0.00 0.00 4.95
56 57 3.272581 GGATTTGATGCAATTTGGGGTG 58.727 45.455 0.00 0.00 0.00 4.61
57 58 2.855209 TTTGATGCAATTTGGGGTGG 57.145 45.000 0.00 0.00 0.00 4.61
58 59 0.982704 TTGATGCAATTTGGGGTGGG 59.017 50.000 0.00 0.00 0.00 4.61
59 60 0.908656 TGATGCAATTTGGGGTGGGG 60.909 55.000 0.00 0.00 0.00 4.96
60 61 0.909133 GATGCAATTTGGGGTGGGGT 60.909 55.000 0.00 0.00 0.00 4.95
61 62 0.909133 ATGCAATTTGGGGTGGGGTC 60.909 55.000 0.00 0.00 0.00 4.46
62 63 2.645192 GCAATTTGGGGTGGGGTCG 61.645 63.158 0.00 0.00 0.00 4.79
63 64 1.981853 CAATTTGGGGTGGGGTCGG 60.982 63.158 0.00 0.00 0.00 4.79
64 65 3.232497 AATTTGGGGTGGGGTCGGG 62.232 63.158 0.00 0.00 0.00 5.14
110 111 3.451894 GGCCAGCCCGGACATTTG 61.452 66.667 0.73 0.00 45.64 2.32
111 112 2.361104 GCCAGCCCGGACATTTGA 60.361 61.111 0.73 0.00 36.56 2.69
112 113 2.409870 GCCAGCCCGGACATTTGAG 61.410 63.158 0.73 0.00 36.56 3.02
113 114 1.750399 CCAGCCCGGACATTTGAGG 60.750 63.158 0.73 0.00 36.56 3.86
114 115 1.002134 CAGCCCGGACATTTGAGGT 60.002 57.895 0.73 0.00 0.00 3.85
115 116 0.609131 CAGCCCGGACATTTGAGGTT 60.609 55.000 0.73 0.00 0.00 3.50
116 117 0.322546 AGCCCGGACATTTGAGGTTC 60.323 55.000 0.73 0.00 0.00 3.62
117 118 1.644786 GCCCGGACATTTGAGGTTCG 61.645 60.000 0.73 0.00 37.01 3.95
118 119 0.321298 CCCGGACATTTGAGGTTCGT 60.321 55.000 0.73 0.00 35.49 3.85
119 120 1.519408 CCGGACATTTGAGGTTCGTT 58.481 50.000 0.00 0.00 35.49 3.85
120 121 1.877443 CCGGACATTTGAGGTTCGTTT 59.123 47.619 0.00 0.00 35.49 3.60
121 122 3.068560 CCGGACATTTGAGGTTCGTTTA 58.931 45.455 0.00 0.00 35.49 2.01
122 123 3.499157 CCGGACATTTGAGGTTCGTTTAA 59.501 43.478 0.00 0.00 35.49 1.52
123 124 4.378046 CCGGACATTTGAGGTTCGTTTAAG 60.378 45.833 0.00 0.00 35.49 1.85
124 125 4.378046 CGGACATTTGAGGTTCGTTTAAGG 60.378 45.833 0.00 0.00 32.64 2.69
125 126 4.758165 GGACATTTGAGGTTCGTTTAAGGA 59.242 41.667 0.00 0.00 0.00 3.36
126 127 5.106673 GGACATTTGAGGTTCGTTTAAGGAG 60.107 44.000 0.00 0.00 0.00 3.69
127 128 4.215613 ACATTTGAGGTTCGTTTAAGGAGC 59.784 41.667 0.00 0.00 0.00 4.70
128 129 2.467566 TGAGGTTCGTTTAAGGAGCC 57.532 50.000 11.64 11.64 34.21 4.70
129 130 1.002773 TGAGGTTCGTTTAAGGAGCCC 59.997 52.381 15.06 8.75 34.48 5.19
130 131 0.036671 AGGTTCGTTTAAGGAGCCCG 60.037 55.000 15.06 0.00 34.48 6.13
131 132 0.321034 GGTTCGTTTAAGGAGCCCGT 60.321 55.000 8.96 0.00 28.76 5.28
132 133 1.073964 GTTCGTTTAAGGAGCCCGTC 58.926 55.000 0.00 0.00 0.00 4.79
133 134 0.971386 TTCGTTTAAGGAGCCCGTCT 59.029 50.000 0.00 0.00 0.00 4.18
134 135 0.245539 TCGTTTAAGGAGCCCGTCTG 59.754 55.000 0.00 0.00 0.00 3.51
135 136 0.739813 CGTTTAAGGAGCCCGTCTGG 60.740 60.000 0.00 0.00 37.09 3.86
136 137 0.611714 GTTTAAGGAGCCCGTCTGGA 59.388 55.000 0.00 0.00 37.49 3.86
137 138 1.209747 GTTTAAGGAGCCCGTCTGGAT 59.790 52.381 0.00 0.00 37.49 3.41
159 160 2.249844 AAAAATCGTGACCGGTCAGT 57.750 45.000 37.04 22.54 40.75 3.41
160 161 1.508632 AAAATCGTGACCGGTCAGTG 58.491 50.000 37.04 29.80 40.75 3.66
161 162 0.677288 AAATCGTGACCGGTCAGTGA 59.323 50.000 37.04 33.45 40.75 3.41
162 163 0.038526 AATCGTGACCGGTCAGTGAC 60.039 55.000 37.04 23.44 40.75 3.67
170 171 4.736896 GGTCAGTGACCGGACGGC 62.737 72.222 26.12 2.06 43.14 5.68
171 172 4.736896 GTCAGTGACCGGACGGCC 62.737 72.222 9.46 0.00 39.32 6.13
204 205 4.606071 GGCGCCTGGCTATAGATG 57.394 61.111 22.15 0.00 42.94 2.90
205 206 1.743252 GGCGCCTGGCTATAGATGC 60.743 63.158 22.15 10.44 42.94 3.91
206 207 1.294780 GCGCCTGGCTATAGATGCT 59.705 57.895 17.92 0.00 39.11 3.79
207 208 0.739112 GCGCCTGGCTATAGATGCTC 60.739 60.000 17.92 0.00 39.11 4.26
208 209 0.894141 CGCCTGGCTATAGATGCTCT 59.106 55.000 17.92 0.00 0.00 4.09
209 210 1.274728 CGCCTGGCTATAGATGCTCTT 59.725 52.381 17.92 0.00 0.00 2.85
210 211 2.493675 CGCCTGGCTATAGATGCTCTTA 59.506 50.000 17.92 0.00 0.00 2.10
211 212 3.056536 CGCCTGGCTATAGATGCTCTTAA 60.057 47.826 17.92 0.00 0.00 1.85
212 213 4.382470 CGCCTGGCTATAGATGCTCTTAAT 60.382 45.833 17.92 0.00 0.00 1.40
213 214 4.874966 GCCTGGCTATAGATGCTCTTAATG 59.125 45.833 12.43 0.00 0.00 1.90
214 215 5.570439 GCCTGGCTATAGATGCTCTTAATGT 60.570 44.000 12.43 0.00 0.00 2.71
215 216 5.873712 CCTGGCTATAGATGCTCTTAATGTG 59.126 44.000 3.21 0.00 0.00 3.21
216 217 6.295518 CCTGGCTATAGATGCTCTTAATGTGA 60.296 42.308 3.21 0.00 0.00 3.58
217 218 6.695429 TGGCTATAGATGCTCTTAATGTGAG 58.305 40.000 3.21 0.00 34.87 3.51
224 225 2.299993 CTCTTAATGTGAGCTCGGCA 57.700 50.000 9.64 11.14 0.00 5.69
225 226 2.621338 CTCTTAATGTGAGCTCGGCAA 58.379 47.619 9.64 0.00 0.00 4.52
226 227 3.002791 CTCTTAATGTGAGCTCGGCAAA 58.997 45.455 9.64 2.64 0.00 3.68
227 228 3.407698 TCTTAATGTGAGCTCGGCAAAA 58.592 40.909 9.64 8.64 0.00 2.44
228 229 4.009675 TCTTAATGTGAGCTCGGCAAAAT 58.990 39.130 9.64 4.80 0.00 1.82
229 230 5.182487 TCTTAATGTGAGCTCGGCAAAATA 58.818 37.500 9.64 3.94 0.00 1.40
230 231 5.645929 TCTTAATGTGAGCTCGGCAAAATAA 59.354 36.000 9.64 10.36 0.00 1.40
231 232 4.361451 AATGTGAGCTCGGCAAAATAAG 57.639 40.909 9.64 0.00 0.00 1.73
232 233 3.052455 TGTGAGCTCGGCAAAATAAGA 57.948 42.857 9.64 0.00 0.00 2.10
233 234 3.002791 TGTGAGCTCGGCAAAATAAGAG 58.997 45.455 9.64 0.00 0.00 2.85
234 235 2.352960 GTGAGCTCGGCAAAATAAGAGG 59.647 50.000 9.64 0.00 0.00 3.69
235 236 1.943340 GAGCTCGGCAAAATAAGAGGG 59.057 52.381 0.00 0.00 0.00 4.30
236 237 1.025041 GCTCGGCAAAATAAGAGGGG 58.975 55.000 0.00 0.00 0.00 4.79
237 238 1.682087 GCTCGGCAAAATAAGAGGGGT 60.682 52.381 0.00 0.00 0.00 4.95
238 239 2.289565 CTCGGCAAAATAAGAGGGGTC 58.710 52.381 0.00 0.00 0.00 4.46
239 240 1.913419 TCGGCAAAATAAGAGGGGTCT 59.087 47.619 0.00 0.00 0.00 3.85
240 241 2.307686 TCGGCAAAATAAGAGGGGTCTT 59.692 45.455 0.00 0.00 0.00 3.01
241 242 2.423538 CGGCAAAATAAGAGGGGTCTTG 59.576 50.000 0.00 0.00 0.00 3.02
242 243 3.431415 GGCAAAATAAGAGGGGTCTTGT 58.569 45.455 0.00 0.00 0.00 3.16
243 244 3.193479 GGCAAAATAAGAGGGGTCTTGTG 59.807 47.826 0.00 0.00 0.00 3.33
244 245 4.079253 GCAAAATAAGAGGGGTCTTGTGA 58.921 43.478 0.00 0.00 0.00 3.58
245 246 4.706962 GCAAAATAAGAGGGGTCTTGTGAT 59.293 41.667 0.00 0.00 0.00 3.06
246 247 5.393461 GCAAAATAAGAGGGGTCTTGTGATG 60.393 44.000 0.00 0.00 0.00 3.07
247 248 5.779241 AAATAAGAGGGGTCTTGTGATGA 57.221 39.130 0.00 0.00 0.00 2.92
248 249 5.779241 AATAAGAGGGGTCTTGTGATGAA 57.221 39.130 0.00 0.00 0.00 2.57
249 250 5.779241 ATAAGAGGGGTCTTGTGATGAAA 57.221 39.130 0.00 0.00 0.00 2.69
250 251 4.453480 AAGAGGGGTCTTGTGATGAAAA 57.547 40.909 0.00 0.00 0.00 2.29
251 252 3.756117 AGAGGGGTCTTGTGATGAAAAC 58.244 45.455 0.00 0.00 0.00 2.43
252 253 2.484264 GAGGGGTCTTGTGATGAAAACG 59.516 50.000 0.00 0.00 0.00 3.60
253 254 1.539827 GGGGTCTTGTGATGAAAACGG 59.460 52.381 0.00 0.00 0.00 4.44
254 255 1.068541 GGGTCTTGTGATGAAAACGGC 60.069 52.381 0.00 0.00 0.00 5.68
255 256 1.880027 GGTCTTGTGATGAAAACGGCT 59.120 47.619 0.00 0.00 0.00 5.52
256 257 3.071479 GGTCTTGTGATGAAAACGGCTA 58.929 45.455 0.00 0.00 0.00 3.93
257 258 3.689649 GGTCTTGTGATGAAAACGGCTAT 59.310 43.478 0.00 0.00 0.00 2.97
258 259 4.873827 GGTCTTGTGATGAAAACGGCTATA 59.126 41.667 0.00 0.00 0.00 1.31
259 260 5.006746 GGTCTTGTGATGAAAACGGCTATAG 59.993 44.000 0.00 0.00 0.00 1.31
260 261 5.581085 GTCTTGTGATGAAAACGGCTATAGT 59.419 40.000 0.84 0.00 0.00 2.12
261 262 6.092259 GTCTTGTGATGAAAACGGCTATAGTT 59.908 38.462 0.84 0.00 0.00 2.24
262 263 5.794687 TGTGATGAAAACGGCTATAGTTG 57.205 39.130 0.84 0.00 31.43 3.16
263 264 5.483811 TGTGATGAAAACGGCTATAGTTGA 58.516 37.500 0.84 0.00 31.43 3.18
264 265 5.580691 TGTGATGAAAACGGCTATAGTTGAG 59.419 40.000 0.84 0.00 31.43 3.02
265 266 5.006746 GTGATGAAAACGGCTATAGTTGAGG 59.993 44.000 0.84 0.00 31.43 3.86
266 267 3.869065 TGAAAACGGCTATAGTTGAGGG 58.131 45.455 0.84 0.00 31.43 4.30
267 268 3.262405 TGAAAACGGCTATAGTTGAGGGT 59.738 43.478 0.84 0.00 31.43 4.34
268 269 2.981859 AACGGCTATAGTTGAGGGTG 57.018 50.000 0.84 0.00 0.00 4.61
269 270 1.861982 ACGGCTATAGTTGAGGGTGT 58.138 50.000 0.84 0.00 0.00 4.16
270 271 2.185387 ACGGCTATAGTTGAGGGTGTT 58.815 47.619 0.84 0.00 0.00 3.32
271 272 3.368248 ACGGCTATAGTTGAGGGTGTTA 58.632 45.455 0.84 0.00 0.00 2.41
272 273 3.770933 ACGGCTATAGTTGAGGGTGTTAA 59.229 43.478 0.84 0.00 0.00 2.01
273 274 4.223477 ACGGCTATAGTTGAGGGTGTTAAA 59.777 41.667 0.84 0.00 0.00 1.52
274 275 5.104652 ACGGCTATAGTTGAGGGTGTTAAAT 60.105 40.000 0.84 0.00 0.00 1.40
275 276 6.098695 ACGGCTATAGTTGAGGGTGTTAAATA 59.901 38.462 0.84 0.00 0.00 1.40
276 277 7.159372 CGGCTATAGTTGAGGGTGTTAAATAT 58.841 38.462 0.84 0.00 0.00 1.28
277 278 8.308931 CGGCTATAGTTGAGGGTGTTAAATATA 58.691 37.037 0.84 0.00 0.00 0.86
302 303 8.980143 AAAATAAAATCACCAACCTTACGATG 57.020 30.769 0.00 0.00 0.00 3.84
303 304 6.693315 ATAAAATCACCAACCTTACGATGG 57.307 37.500 0.00 0.00 40.16 3.51
304 305 3.992943 AATCACCAACCTTACGATGGA 57.007 42.857 0.00 0.00 37.66 3.41
305 306 3.992943 ATCACCAACCTTACGATGGAA 57.007 42.857 0.00 0.00 37.66 3.53
306 307 3.992943 TCACCAACCTTACGATGGAAT 57.007 42.857 0.00 0.00 37.66 3.01
307 308 3.605634 TCACCAACCTTACGATGGAATG 58.394 45.455 0.00 0.00 37.66 2.67
308 309 2.097466 CACCAACCTTACGATGGAATGC 59.903 50.000 0.00 0.00 37.66 3.56
309 310 2.290641 ACCAACCTTACGATGGAATGCA 60.291 45.455 0.00 0.00 37.66 3.96
310 311 2.752354 CCAACCTTACGATGGAATGCAA 59.248 45.455 0.00 0.00 36.27 4.08
311 312 3.192422 CCAACCTTACGATGGAATGCAAA 59.808 43.478 0.00 0.00 36.27 3.68
312 313 4.414852 CAACCTTACGATGGAATGCAAAG 58.585 43.478 0.00 0.00 0.00 2.77
313 314 3.016736 ACCTTACGATGGAATGCAAAGG 58.983 45.455 6.50 6.50 38.36 3.11
314 315 3.016736 CCTTACGATGGAATGCAAAGGT 58.983 45.455 0.00 0.00 0.00 3.50
315 316 3.443681 CCTTACGATGGAATGCAAAGGTT 59.556 43.478 0.00 0.00 0.00 3.50
316 317 4.082245 CCTTACGATGGAATGCAAAGGTTT 60.082 41.667 0.00 0.00 0.00 3.27
317 318 5.124776 CCTTACGATGGAATGCAAAGGTTTA 59.875 40.000 0.00 0.00 0.00 2.01
318 319 6.349777 CCTTACGATGGAATGCAAAGGTTTAA 60.350 38.462 0.00 0.00 0.00 1.52
319 320 5.659440 ACGATGGAATGCAAAGGTTTAAT 57.341 34.783 0.00 0.00 0.00 1.40
320 321 5.410067 ACGATGGAATGCAAAGGTTTAATG 58.590 37.500 0.00 0.00 0.00 1.90
321 322 5.047377 ACGATGGAATGCAAAGGTTTAATGT 60.047 36.000 0.00 0.00 0.00 2.71
322 323 5.289193 CGATGGAATGCAAAGGTTTAATGTG 59.711 40.000 0.00 0.00 0.00 3.21
323 324 4.892433 TGGAATGCAAAGGTTTAATGTGG 58.108 39.130 0.00 0.00 0.00 4.17
324 325 3.684305 GGAATGCAAAGGTTTAATGTGGC 59.316 43.478 0.00 0.00 0.00 5.01
325 326 2.829741 TGCAAAGGTTTAATGTGGCC 57.170 45.000 0.00 0.00 0.00 5.36
326 327 1.000283 TGCAAAGGTTTAATGTGGCCG 60.000 47.619 0.00 0.00 0.00 6.13
327 328 1.271102 GCAAAGGTTTAATGTGGCCGA 59.729 47.619 0.00 0.00 0.00 5.54
328 329 2.671070 GCAAAGGTTTAATGTGGCCGAG 60.671 50.000 0.00 0.00 0.00 4.63
329 330 2.817258 CAAAGGTTTAATGTGGCCGAGA 59.183 45.455 0.00 0.00 0.00 4.04
330 331 2.871096 AGGTTTAATGTGGCCGAGAA 57.129 45.000 0.00 0.00 0.00 2.87
331 332 2.711542 AGGTTTAATGTGGCCGAGAAG 58.288 47.619 0.00 0.00 0.00 2.85
332 333 2.039879 AGGTTTAATGTGGCCGAGAAGT 59.960 45.455 0.00 0.00 0.00 3.01
333 334 2.817844 GGTTTAATGTGGCCGAGAAGTT 59.182 45.455 0.00 0.00 0.00 2.66
334 335 3.254903 GGTTTAATGTGGCCGAGAAGTTT 59.745 43.478 0.00 0.00 0.00 2.66
335 336 4.226761 GTTTAATGTGGCCGAGAAGTTTG 58.773 43.478 0.00 0.00 0.00 2.93
336 337 1.981256 AATGTGGCCGAGAAGTTTGT 58.019 45.000 0.00 0.00 0.00 2.83
337 338 2.851263 ATGTGGCCGAGAAGTTTGTA 57.149 45.000 0.00 0.00 0.00 2.41
338 339 2.851263 TGTGGCCGAGAAGTTTGTAT 57.149 45.000 0.00 0.00 0.00 2.29
339 340 2.422597 TGTGGCCGAGAAGTTTGTATG 58.577 47.619 0.00 0.00 0.00 2.39
340 341 2.224426 TGTGGCCGAGAAGTTTGTATGT 60.224 45.455 0.00 0.00 0.00 2.29
341 342 2.159627 GTGGCCGAGAAGTTTGTATGTG 59.840 50.000 0.00 0.00 0.00 3.21
342 343 1.737793 GGCCGAGAAGTTTGTATGTGG 59.262 52.381 0.00 0.00 0.00 4.17
343 344 1.737793 GCCGAGAAGTTTGTATGTGGG 59.262 52.381 0.00 0.00 0.00 4.61
344 345 2.874457 GCCGAGAAGTTTGTATGTGGGT 60.874 50.000 0.00 0.00 0.00 4.51
345 346 2.742053 CCGAGAAGTTTGTATGTGGGTG 59.258 50.000 0.00 0.00 0.00 4.61
346 347 2.742053 CGAGAAGTTTGTATGTGGGTGG 59.258 50.000 0.00 0.00 0.00 4.61
347 348 3.556213 CGAGAAGTTTGTATGTGGGTGGA 60.556 47.826 0.00 0.00 0.00 4.02
348 349 4.003648 GAGAAGTTTGTATGTGGGTGGAG 58.996 47.826 0.00 0.00 0.00 3.86
349 350 3.394606 AGAAGTTTGTATGTGGGTGGAGT 59.605 43.478 0.00 0.00 0.00 3.85
350 351 3.876309 AGTTTGTATGTGGGTGGAGTT 57.124 42.857 0.00 0.00 0.00 3.01
351 352 3.486383 AGTTTGTATGTGGGTGGAGTTG 58.514 45.455 0.00 0.00 0.00 3.16
352 353 1.904287 TTGTATGTGGGTGGAGTTGC 58.096 50.000 0.00 0.00 0.00 4.17
353 354 0.767998 TGTATGTGGGTGGAGTTGCA 59.232 50.000 0.00 0.00 0.00 4.08
354 355 1.354031 TGTATGTGGGTGGAGTTGCAT 59.646 47.619 0.00 0.00 0.00 3.96
355 356 2.224992 TGTATGTGGGTGGAGTTGCATT 60.225 45.455 0.00 0.00 0.00 3.56
356 357 2.014010 ATGTGGGTGGAGTTGCATTT 57.986 45.000 0.00 0.00 0.00 2.32
357 358 1.786937 TGTGGGTGGAGTTGCATTTT 58.213 45.000 0.00 0.00 0.00 1.82
358 359 1.686052 TGTGGGTGGAGTTGCATTTTC 59.314 47.619 0.00 0.00 0.00 2.29
359 360 1.000843 GTGGGTGGAGTTGCATTTTCC 59.999 52.381 5.05 5.05 0.00 3.13
360 361 1.337118 GGGTGGAGTTGCATTTTCCA 58.663 50.000 9.54 9.54 38.62 3.53
365 366 4.686191 TGGAGTTGCATTTTCCACATTT 57.314 36.364 9.54 0.00 36.13 2.32
366 367 4.378774 TGGAGTTGCATTTTCCACATTTG 58.621 39.130 9.54 0.00 36.13 2.32
367 368 4.100653 TGGAGTTGCATTTTCCACATTTGA 59.899 37.500 9.54 0.00 36.13 2.69
368 369 5.221682 TGGAGTTGCATTTTCCACATTTGAT 60.222 36.000 9.54 0.00 36.13 2.57
369 370 5.349543 GGAGTTGCATTTTCCACATTTGATC 59.650 40.000 6.74 0.00 0.00 2.92
370 371 5.240121 AGTTGCATTTTCCACATTTGATCC 58.760 37.500 0.00 0.00 0.00 3.36
371 372 4.886496 TGCATTTTCCACATTTGATCCA 57.114 36.364 0.00 0.00 0.00 3.41
372 373 5.224821 TGCATTTTCCACATTTGATCCAA 57.775 34.783 0.00 0.00 0.00 3.53
373 374 5.618236 TGCATTTTCCACATTTGATCCAAA 58.382 33.333 0.00 0.00 37.75 3.28
374 375 6.239396 TGCATTTTCCACATTTGATCCAAAT 58.761 32.000 0.00 0.00 43.71 2.32
388 389 7.852550 TTGATCCAAATGATAAATATGGGCA 57.147 32.000 0.00 0.00 32.41 5.36
389 390 7.852550 TGATCCAAATGATAAATATGGGCAA 57.147 32.000 0.00 0.00 32.41 4.52
390 391 8.438618 TGATCCAAATGATAAATATGGGCAAT 57.561 30.769 0.00 0.00 32.41 3.56
391 392 8.315482 TGATCCAAATGATAAATATGGGCAATG 58.685 33.333 0.00 0.00 32.41 2.82
392 393 6.465948 TCCAAATGATAAATATGGGCAATGC 58.534 36.000 0.00 0.00 0.00 3.56
393 394 6.042897 TCCAAATGATAAATATGGGCAATGCA 59.957 34.615 7.79 0.00 0.00 3.96
394 395 6.148150 CCAAATGATAAATATGGGCAATGCAC 59.852 38.462 7.79 3.19 0.00 4.57
395 396 4.870123 TGATAAATATGGGCAATGCACC 57.130 40.909 4.50 5.35 0.00 5.01
396 397 4.482030 TGATAAATATGGGCAATGCACCT 58.518 39.130 4.50 0.00 0.00 4.00
397 398 5.639139 TGATAAATATGGGCAATGCACCTA 58.361 37.500 4.50 0.00 0.00 3.08
398 399 6.255287 TGATAAATATGGGCAATGCACCTAT 58.745 36.000 4.50 1.56 32.48 2.57
399 400 7.409358 TGATAAATATGGGCAATGCACCTATA 58.591 34.615 4.50 0.00 35.40 1.31
400 401 5.982890 AAATATGGGCAATGCACCTATAC 57.017 39.130 4.50 0.00 33.94 1.47
401 402 4.934797 ATATGGGCAATGCACCTATACT 57.065 40.909 4.50 0.00 33.94 2.12
402 403 6.387192 AATATGGGCAATGCACCTATACTA 57.613 37.500 4.50 0.00 33.94 1.82
403 404 4.722526 ATGGGCAATGCACCTATACTAA 57.277 40.909 4.50 0.00 0.00 2.24
404 405 3.815809 TGGGCAATGCACCTATACTAAC 58.184 45.455 4.50 0.00 0.00 2.34
405 406 3.146847 GGGCAATGCACCTATACTAACC 58.853 50.000 7.79 0.00 0.00 2.85
406 407 3.181443 GGGCAATGCACCTATACTAACCT 60.181 47.826 7.79 0.00 0.00 3.50
407 408 3.815401 GGCAATGCACCTATACTAACCTG 59.185 47.826 7.79 0.00 0.00 4.00
408 409 4.444306 GGCAATGCACCTATACTAACCTGA 60.444 45.833 7.79 0.00 0.00 3.86
409 410 5.308825 GCAATGCACCTATACTAACCTGAT 58.691 41.667 0.00 0.00 0.00 2.90
410 411 5.409826 GCAATGCACCTATACTAACCTGATC 59.590 44.000 0.00 0.00 0.00 2.92
411 412 6.524734 CAATGCACCTATACTAACCTGATCA 58.475 40.000 0.00 0.00 0.00 2.92
412 413 5.791336 TGCACCTATACTAACCTGATCAG 57.209 43.478 16.24 16.24 0.00 2.90
424 425 1.481871 CTGATCAGGCCAGGCAAAAT 58.518 50.000 15.19 2.22 0.00 1.82
426 427 1.272592 TGATCAGGCCAGGCAAAATCA 60.273 47.619 15.19 14.88 0.00 2.57
428 429 2.824689 TCAGGCCAGGCAAAATCATA 57.175 45.000 15.19 0.00 0.00 2.15
434 435 3.282021 GCCAGGCAAAATCATAGAGTGA 58.718 45.455 6.55 0.00 42.06 3.41
436 437 4.158394 GCCAGGCAAAATCATAGAGTGAAA 59.842 41.667 6.55 0.00 40.97 2.69
439 440 7.325694 CCAGGCAAAATCATAGAGTGAAAATT 58.674 34.615 0.00 0.00 40.97 1.82
446 447 7.951347 AATCATAGAGTGAAAATTCCAAGCT 57.049 32.000 0.00 0.00 40.97 3.74
450 451 5.635417 AGAGTGAAAATTCCAAGCTTAGC 57.365 39.130 0.00 0.00 0.00 3.09
470 472 0.321298 CCTGGACGACCCGAAACATT 60.321 55.000 0.34 0.00 37.93 2.71
483 485 3.919804 CCGAAACATTTGAACATCGCATT 59.080 39.130 0.00 0.00 0.00 3.56
575 577 7.913674 TTTTAAACCACATTTTGAGCTTTGT 57.086 28.000 0.00 0.00 0.00 2.83
576 578 7.913674 TTTAAACCACATTTTGAGCTTTGTT 57.086 28.000 0.00 0.00 0.00 2.83
578 580 3.705604 ACCACATTTTGAGCTTTGTTCG 58.294 40.909 0.00 0.00 0.00 3.95
579 581 3.052036 CCACATTTTGAGCTTTGTTCGG 58.948 45.455 0.00 0.00 0.00 4.30
580 582 2.472488 CACATTTTGAGCTTTGTTCGGC 59.528 45.455 0.00 0.00 0.00 5.54
581 583 2.061028 CATTTTGAGCTTTGTTCGGCC 58.939 47.619 0.00 0.00 0.00 6.13
582 584 1.398692 TTTTGAGCTTTGTTCGGCCT 58.601 45.000 0.00 0.00 0.00 5.19
583 585 1.398692 TTTGAGCTTTGTTCGGCCTT 58.601 45.000 0.00 0.00 0.00 4.35
584 586 1.398692 TTGAGCTTTGTTCGGCCTTT 58.601 45.000 0.00 0.00 0.00 3.11
585 587 0.951558 TGAGCTTTGTTCGGCCTTTC 59.048 50.000 0.00 0.00 0.00 2.62
586 588 0.110192 GAGCTTTGTTCGGCCTTTCG 60.110 55.000 0.00 0.00 0.00 3.46
587 589 1.081442 GCTTTGTTCGGCCTTTCGG 60.081 57.895 0.00 0.00 0.00 4.30
588 590 1.579429 CTTTGTTCGGCCTTTCGGG 59.421 57.895 0.00 0.00 38.36 5.14
597 599 2.751837 CCTTTCGGGCTGGGCTTC 60.752 66.667 0.00 0.00 0.00 3.86
617 637 2.562876 GGCGGGATAGGTCGAGTCC 61.563 68.421 0.00 0.00 0.00 3.85
626 646 2.486042 GTCGAGTCCGAGACCAGC 59.514 66.667 0.00 0.00 46.52 4.85
628 648 3.062466 CGAGTCCGAGACCAGCCA 61.062 66.667 1.06 0.00 38.22 4.75
679 699 5.182001 CCCATGAACACTTCAAAGACCTAAG 59.818 44.000 0.00 0.00 43.95 2.18
680 700 5.997746 CCATGAACACTTCAAAGACCTAAGA 59.002 40.000 0.00 0.00 43.95 2.10
681 701 6.073003 CCATGAACACTTCAAAGACCTAAGAC 60.073 42.308 0.00 0.00 43.95 3.01
682 702 5.365619 TGAACACTTCAAAGACCTAAGACC 58.634 41.667 0.00 0.00 36.59 3.85
684 704 3.244112 ACACTTCAAAGACCTAAGACCGG 60.244 47.826 0.00 0.00 0.00 5.28
685 705 3.006537 CACTTCAAAGACCTAAGACCGGA 59.993 47.826 9.46 0.00 0.00 5.14
686 706 3.644738 ACTTCAAAGACCTAAGACCGGAA 59.355 43.478 9.46 0.00 0.00 4.30
687 707 3.672767 TCAAAGACCTAAGACCGGAAC 57.327 47.619 9.46 0.99 0.00 3.62
715 901 8.426569 AGAAATATGGGCAATGCACTTATATT 57.573 30.769 14.94 10.83 32.38 1.28
716 902 8.873144 AGAAATATGGGCAATGCACTTATATTT 58.127 29.630 19.32 19.32 32.38 1.40
717 903 9.143631 GAAATATGGGCAATGCACTTATATTTC 57.856 33.333 24.54 24.54 38.12 2.17
718 904 7.779754 ATATGGGCAATGCACTTATATTTCA 57.220 32.000 13.31 0.00 31.91 2.69
719 905 5.929058 TGGGCAATGCACTTATATTTCAA 57.071 34.783 9.57 0.00 30.56 2.69
720 906 5.659463 TGGGCAATGCACTTATATTTCAAC 58.341 37.500 9.57 0.00 30.56 3.18
721 907 5.186603 TGGGCAATGCACTTATATTTCAACA 59.813 36.000 9.57 0.00 30.56 3.33
722 908 6.127111 TGGGCAATGCACTTATATTTCAACAT 60.127 34.615 9.57 0.00 30.56 2.71
723 909 6.762661 GGGCAATGCACTTATATTTCAACATT 59.237 34.615 7.79 0.00 0.00 2.71
724 910 7.254522 GGGCAATGCACTTATATTTCAACATTG 60.255 37.037 7.79 0.00 43.62 2.82
725 911 7.278424 GGCAATGCACTTATATTTCAACATTGT 59.722 33.333 7.79 0.00 43.04 2.71
726 912 8.323140 GCAATGCACTTATATTTCAACATTGTC 58.677 33.333 0.00 3.73 43.04 3.18
727 913 9.577110 CAATGCACTTATATTTCAACATTGTCT 57.423 29.630 0.00 0.00 38.71 3.41
728 914 9.793252 AATGCACTTATATTTCAACATTGTCTC 57.207 29.630 0.00 0.00 0.00 3.36
729 915 8.334263 TGCACTTATATTTCAACATTGTCTCA 57.666 30.769 0.00 0.00 0.00 3.27
730 916 8.791675 TGCACTTATATTTCAACATTGTCTCAA 58.208 29.630 0.00 0.00 0.00 3.02
731 917 9.624697 GCACTTATATTTCAACATTGTCTCAAA 57.375 29.630 0.00 0.00 0.00 2.69
778 964 6.452244 CAACATTTTGGAACGGAAGAATTC 57.548 37.500 0.00 0.00 46.67 2.17
788 974 3.665173 CGGAAGAATTCTGCTAGTTGC 57.335 47.619 13.34 0.00 45.65 4.17
885 1079 4.962836 AGGCTGGCACGCAAAGCT 62.963 61.111 13.55 0.00 37.12 3.74
921 1115 2.821366 GCGGTGTGCCATCTCAGG 60.821 66.667 0.00 0.00 37.76 3.86
923 1117 1.524002 CGGTGTGCCATCTCAGGAT 59.476 57.895 0.00 0.00 34.09 3.24
926 1120 2.224378 CGGTGTGCCATCTCAGGATTAT 60.224 50.000 0.00 0.00 34.09 1.28
927 1121 3.406764 GGTGTGCCATCTCAGGATTATC 58.593 50.000 0.00 0.00 34.09 1.75
930 1124 3.072038 TGTGCCATCTCAGGATTATCAGG 59.928 47.826 0.00 0.00 0.00 3.86
931 1125 2.641321 TGCCATCTCAGGATTATCAGGG 59.359 50.000 0.00 0.00 0.00 4.45
932 1126 2.026449 GCCATCTCAGGATTATCAGGGG 60.026 54.545 0.00 0.00 0.00 4.79
934 1128 2.494888 TCTCAGGATTATCAGGGGCA 57.505 50.000 0.00 0.00 0.00 5.36
935 1129 2.995746 TCTCAGGATTATCAGGGGCAT 58.004 47.619 0.00 0.00 0.00 4.40
937 1131 4.502415 TCTCAGGATTATCAGGGGCATAA 58.498 43.478 0.00 0.00 0.00 1.90
938 1132 4.533707 TCTCAGGATTATCAGGGGCATAAG 59.466 45.833 0.00 0.00 0.00 1.73
939 1133 3.009473 TCAGGATTATCAGGGGCATAAGC 59.991 47.826 0.00 0.00 41.10 3.09
1100 1312 2.170273 GCTCGTCGGTGCGAAAAC 59.830 61.111 0.00 0.00 40.57 2.43
1195 1407 4.680537 ACCTCCACCTCGTCGGCT 62.681 66.667 0.00 0.00 35.61 5.52
1225 1437 2.047443 GTCTCCTTCCGCGACCTCT 61.047 63.158 8.23 0.00 0.00 3.69
1228 1440 3.839432 CCTTCCGCGACCTCTCCC 61.839 72.222 8.23 0.00 0.00 4.30
1229 1441 3.068691 CTTCCGCGACCTCTCCCA 61.069 66.667 8.23 0.00 0.00 4.37
1233 1445 0.685131 TCCGCGACCTCTCCCATAAA 60.685 55.000 8.23 0.00 0.00 1.40
1678 1890 4.193334 TCCGCCAGCTGATCGACG 62.193 66.667 23.57 14.99 0.00 5.12
1803 2015 1.833606 TCGCAAGAGGTGGGACAAA 59.166 52.632 0.00 0.00 43.79 2.83
1953 2168 6.199154 CGATCTTGCTGGTAAATAGTACAGTG 59.801 42.308 0.00 0.00 33.62 3.66
1973 2189 7.783042 ACAGTGATTACTACTCCAATACTTCC 58.217 38.462 0.00 0.00 34.74 3.46
1979 2195 4.504858 ACTACTCCAATACTTCCGCAAAG 58.495 43.478 0.00 0.00 41.08 2.77
2017 2233 6.261381 TCCATTCAGCGGTAATTTATTGGTAC 59.739 38.462 0.00 0.00 0.00 3.34
2018 2234 6.262273 CCATTCAGCGGTAATTTATTGGTACT 59.738 38.462 0.00 0.00 0.00 2.73
2182 2401 1.757699 GTAGGCAAGGACGAAGGAGAT 59.242 52.381 0.00 0.00 0.00 2.75
2184 2403 1.630878 AGGCAAGGACGAAGGAGATTT 59.369 47.619 0.00 0.00 0.00 2.17
2203 2422 2.963548 TACAACAAGACGTGGTCACA 57.036 45.000 0.00 0.00 32.44 3.58
2215 2434 0.613292 TGGTCACAGAGGAGGAGCTC 60.613 60.000 4.71 4.71 0.00 4.09
2295 2514 3.844090 GCTGCTCCTCCGGTCCTC 61.844 72.222 0.00 0.00 0.00 3.71
2296 2515 3.151022 CTGCTCCTCCGGTCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
2433 2652 3.998672 TTCGCGCCGGAGAGGTTT 61.999 61.111 10.31 0.00 43.70 3.27
2472 2691 4.373116 GCGGTCGACAGCAAGGGA 62.373 66.667 31.48 0.00 37.03 4.20
2535 2754 2.707039 CCCGGCATAAACTTCGCG 59.293 61.111 0.00 0.00 0.00 5.87
2547 2766 2.586635 TTCGCGAACACTGCCGTT 60.587 55.556 19.38 0.00 0.00 4.44
2568 2787 2.432146 TGAGATGATGCTAGCGAACCTT 59.568 45.455 10.77 0.00 0.00 3.50
2569 2788 3.636764 TGAGATGATGCTAGCGAACCTTA 59.363 43.478 10.77 0.00 0.00 2.69
2621 2840 0.811915 ACGAAGGAGGTCGACATGAG 59.188 55.000 18.91 4.12 43.86 2.90
2625 2844 1.468985 AGGAGGTCGACATGAGTGAG 58.531 55.000 18.91 0.00 0.00 3.51
2686 2905 4.104738 TCCTTGTTCCAACTCCAAGATCTT 59.895 41.667 0.88 0.88 38.23 2.40
2760 3746 3.243134 TGTGTGCAATCAATCCGCATATG 60.243 43.478 0.00 0.00 38.07 1.78
2777 3763 4.274459 GCATATGCTCCAAGACCTTACAAG 59.726 45.833 20.64 0.00 38.21 3.16
2823 3811 4.929211 CCACTATCTCACAACATTTGTCGA 59.071 41.667 0.00 0.00 43.23 4.20
2862 3850 1.678101 GAAGGGGTGCAGATTATGTGC 59.322 52.381 7.42 7.42 41.59 4.57
2904 3895 4.039124 ACAACAAAGCCCAACATCTAAAGG 59.961 41.667 0.00 0.00 0.00 3.11
3036 4028 2.351253 CGATCCATCTTCAGAGTAGGCG 60.351 54.545 0.00 0.00 0.00 5.52
3068 4063 1.669115 CTTGCCAGACCCTGACGTG 60.669 63.158 0.00 0.00 32.44 4.49
3174 4217 1.750930 CTAGATGCCATGCCGGTCT 59.249 57.895 1.90 0.00 36.97 3.85
3183 4226 2.660064 ATGCCGGTCTTCCTTCGCT 61.660 57.895 1.90 0.00 0.00 4.93
3196 4239 0.391263 CTTCGCTAACACCACCTCCC 60.391 60.000 0.00 0.00 0.00 4.30
3243 4286 2.417379 GCAGTTCCTCTAATCGAGCACA 60.417 50.000 0.00 0.00 38.49 4.57
3261 4304 4.077184 CGAACACCCTAGGCGGCA 62.077 66.667 13.08 0.00 0.00 5.69
3285 4328 1.021202 CAAGAAGGGCACGACAAACA 58.979 50.000 0.00 0.00 0.00 2.83
3291 4334 1.071699 AGGGCACGACAAACATAGTGT 59.928 47.619 0.00 0.00 36.99 3.55
3345 4391 0.391927 CCGGGCATTTTGTCGGAGTA 60.392 55.000 0.00 0.00 44.69 2.59
3358 4404 0.034380 CGGAGTACAGAGGAGGGACA 60.034 60.000 0.00 0.00 0.00 4.02
3365 4411 0.748367 CAGAGGAGGGACATCGACGA 60.748 60.000 0.00 0.00 34.26 4.20
3367 4413 1.001269 AGGAGGGACATCGACGACA 60.001 57.895 0.00 0.00 0.00 4.35
3376 4422 0.388520 CATCGACGACACCTGCAAGA 60.389 55.000 0.00 0.00 34.07 3.02
3418 4482 5.336150 TGAGAGAGCCATCTAGAGTTTTG 57.664 43.478 0.00 0.00 35.30 2.44
3422 4486 6.538263 AGAGAGCCATCTAGAGTTTTGTTTT 58.462 36.000 0.00 0.00 35.30 2.43
3426 4490 6.064717 AGCCATCTAGAGTTTTGTTTTGTCT 58.935 36.000 0.00 0.00 0.00 3.41
3499 4564 0.539438 AAGCCACCAAATGAAGCGGA 60.539 50.000 0.00 0.00 0.00 5.54
3503 4568 1.885887 CCACCAAATGAAGCGGAAGAA 59.114 47.619 0.00 0.00 0.00 2.52
3506 4571 3.004734 CACCAAATGAAGCGGAAGAAAGT 59.995 43.478 0.00 0.00 0.00 2.66
3593 4659 1.153489 CACCGCACAGATCCCAGAG 60.153 63.158 0.00 0.00 0.00 3.35
3602 4668 1.135915 CAGATCCCAGAGTTCTCCACG 59.864 57.143 0.00 0.00 0.00 4.94
3606 4672 0.612174 CCCAGAGTTCTCCACGAGGA 60.612 60.000 0.42 0.42 43.21 3.71
3616 4682 4.477975 CACGAGGACCGGAGCGAC 62.478 72.222 9.46 0.00 43.93 5.19
3628 4694 4.560856 AGCGACGAGATCTGCCGC 62.561 66.667 19.29 19.29 45.39 6.53
3631 4697 4.933064 GACGAGATCTGCCGCCGG 62.933 72.222 0.00 0.00 0.00 6.13
3640 4706 4.382320 TGCCGCCGGGTGACTAAC 62.382 66.667 9.67 0.00 34.97 2.34
3642 4708 4.060038 CCGCCGGGTGACTAACGT 62.060 66.667 9.67 0.00 0.00 3.99
3672 4738 2.017559 GCCATCGTCGGGAGTTAGCT 62.018 60.000 0.00 0.00 0.00 3.32
3675 4743 1.025812 ATCGTCGGGAGTTAGCTGAG 58.974 55.000 0.00 0.00 0.00 3.35
3677 4745 1.890894 GTCGGGAGTTAGCTGAGCA 59.109 57.895 7.39 0.00 0.00 4.26
3683 4751 2.125106 GTTAGCTGAGCACCCCCG 60.125 66.667 7.39 0.00 0.00 5.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.410400 CTCCCGCCACCCTCCAAC 62.410 72.222 0.00 0.00 0.00 3.77
8 9 4.779733 TCCTCCTCCTCCCGCCAC 62.780 72.222 0.00 0.00 0.00 5.01
9 10 3.984186 CTTCCTCCTCCTCCCGCCA 62.984 68.421 0.00 0.00 0.00 5.69
10 11 3.157949 CTTCCTCCTCCTCCCGCC 61.158 72.222 0.00 0.00 0.00 6.13
11 12 3.157949 CCTTCCTCCTCCTCCCGC 61.158 72.222 0.00 0.00 0.00 6.13
12 13 0.910088 AAACCTTCCTCCTCCTCCCG 60.910 60.000 0.00 0.00 0.00 5.14
13 14 0.621082 CAAACCTTCCTCCTCCTCCC 59.379 60.000 0.00 0.00 0.00 4.30
14 15 1.657804 TCAAACCTTCCTCCTCCTCC 58.342 55.000 0.00 0.00 0.00 4.30
15 16 2.092699 CCATCAAACCTTCCTCCTCCTC 60.093 54.545 0.00 0.00 0.00 3.71
16 17 1.918957 CCATCAAACCTTCCTCCTCCT 59.081 52.381 0.00 0.00 0.00 3.69
17 18 1.916181 TCCATCAAACCTTCCTCCTCC 59.084 52.381 0.00 0.00 0.00 4.30
18 19 3.941704 ATCCATCAAACCTTCCTCCTC 57.058 47.619 0.00 0.00 0.00 3.71
19 20 4.044571 TCAAATCCATCAAACCTTCCTCCT 59.955 41.667 0.00 0.00 0.00 3.69
20 21 4.344104 TCAAATCCATCAAACCTTCCTCC 58.656 43.478 0.00 0.00 0.00 4.30
21 22 5.680665 GCATCAAATCCATCAAACCTTCCTC 60.681 44.000 0.00 0.00 0.00 3.71
22 23 4.161001 GCATCAAATCCATCAAACCTTCCT 59.839 41.667 0.00 0.00 0.00 3.36
23 24 4.081531 TGCATCAAATCCATCAAACCTTCC 60.082 41.667 0.00 0.00 0.00 3.46
24 25 5.075858 TGCATCAAATCCATCAAACCTTC 57.924 39.130 0.00 0.00 0.00 3.46
25 26 5.486735 TTGCATCAAATCCATCAAACCTT 57.513 34.783 0.00 0.00 0.00 3.50
26 27 5.687166 ATTGCATCAAATCCATCAAACCT 57.313 34.783 0.00 0.00 0.00 3.50
27 28 6.403855 CCAAATTGCATCAAATCCATCAAACC 60.404 38.462 0.00 0.00 0.00 3.27
28 29 6.403855 CCCAAATTGCATCAAATCCATCAAAC 60.404 38.462 0.00 0.00 0.00 2.93
29 30 5.648526 CCCAAATTGCATCAAATCCATCAAA 59.351 36.000 0.00 0.00 0.00 2.69
30 31 5.186942 CCCAAATTGCATCAAATCCATCAA 58.813 37.500 0.00 0.00 0.00 2.57
31 32 4.384318 CCCCAAATTGCATCAAATCCATCA 60.384 41.667 0.00 0.00 0.00 3.07
32 33 4.131596 CCCCAAATTGCATCAAATCCATC 58.868 43.478 0.00 0.00 0.00 3.51
33 34 3.524380 ACCCCAAATTGCATCAAATCCAT 59.476 39.130 0.00 0.00 0.00 3.41
34 35 2.911636 ACCCCAAATTGCATCAAATCCA 59.088 40.909 0.00 0.00 0.00 3.41
35 36 3.272581 CACCCCAAATTGCATCAAATCC 58.727 45.455 0.00 0.00 0.00 3.01
36 37 3.272581 CCACCCCAAATTGCATCAAATC 58.727 45.455 0.00 0.00 0.00 2.17
37 38 2.026075 CCCACCCCAAATTGCATCAAAT 60.026 45.455 0.00 0.00 0.00 2.32
38 39 1.350351 CCCACCCCAAATTGCATCAAA 59.650 47.619 0.00 0.00 0.00 2.69
39 40 0.982704 CCCACCCCAAATTGCATCAA 59.017 50.000 0.00 0.00 0.00 2.57
40 41 0.908656 CCCCACCCCAAATTGCATCA 60.909 55.000 0.00 0.00 0.00 3.07
41 42 0.909133 ACCCCACCCCAAATTGCATC 60.909 55.000 0.00 0.00 0.00 3.91
42 43 0.909133 GACCCCACCCCAAATTGCAT 60.909 55.000 0.00 0.00 0.00 3.96
43 44 1.535202 GACCCCACCCCAAATTGCA 60.535 57.895 0.00 0.00 0.00 4.08
44 45 2.645192 CGACCCCACCCCAAATTGC 61.645 63.158 0.00 0.00 0.00 3.56
45 46 1.981853 CCGACCCCACCCCAAATTG 60.982 63.158 0.00 0.00 0.00 2.32
46 47 2.443324 CCGACCCCACCCCAAATT 59.557 61.111 0.00 0.00 0.00 1.82
47 48 3.668142 CCCGACCCCACCCCAAAT 61.668 66.667 0.00 0.00 0.00 2.32
65 66 4.742201 CCACGTCGGACCTGGCAG 62.742 72.222 7.75 7.75 36.56 4.85
93 94 3.451894 CAAATGTCCGGGCTGGCC 61.452 66.667 7.97 10.75 37.80 5.36
94 95 2.361104 TCAAATGTCCGGGCTGGC 60.361 61.111 7.97 3.47 37.80 4.85
95 96 1.750399 CCTCAAATGTCCGGGCTGG 60.750 63.158 7.97 5.83 40.09 4.85
96 97 0.609131 AACCTCAAATGTCCGGGCTG 60.609 55.000 7.97 0.00 0.00 4.85
97 98 0.322546 GAACCTCAAATGTCCGGGCT 60.323 55.000 7.97 0.00 0.00 5.19
98 99 1.644786 CGAACCTCAAATGTCCGGGC 61.645 60.000 0.00 0.00 0.00 6.13
99 100 0.321298 ACGAACCTCAAATGTCCGGG 60.321 55.000 0.00 0.00 0.00 5.73
100 101 1.519408 AACGAACCTCAAATGTCCGG 58.481 50.000 0.00 0.00 0.00 5.14
101 102 4.378046 CCTTAAACGAACCTCAAATGTCCG 60.378 45.833 0.00 0.00 0.00 4.79
102 103 4.758165 TCCTTAAACGAACCTCAAATGTCC 59.242 41.667 0.00 0.00 0.00 4.02
103 104 5.617087 GCTCCTTAAACGAACCTCAAATGTC 60.617 44.000 0.00 0.00 0.00 3.06
104 105 4.215613 GCTCCTTAAACGAACCTCAAATGT 59.784 41.667 0.00 0.00 0.00 2.71
105 106 4.379499 GGCTCCTTAAACGAACCTCAAATG 60.379 45.833 0.00 0.00 0.00 2.32
106 107 3.756963 GGCTCCTTAAACGAACCTCAAAT 59.243 43.478 0.00 0.00 0.00 2.32
107 108 3.143728 GGCTCCTTAAACGAACCTCAAA 58.856 45.455 0.00 0.00 0.00 2.69
108 109 2.551504 GGGCTCCTTAAACGAACCTCAA 60.552 50.000 0.00 0.00 0.00 3.02
109 110 1.002773 GGGCTCCTTAAACGAACCTCA 59.997 52.381 0.00 0.00 0.00 3.86
110 111 1.735386 GGGCTCCTTAAACGAACCTC 58.265 55.000 0.00 0.00 0.00 3.85
111 112 0.036671 CGGGCTCCTTAAACGAACCT 60.037 55.000 0.00 0.00 0.00 3.50
112 113 0.321034 ACGGGCTCCTTAAACGAACC 60.321 55.000 0.00 0.00 0.00 3.62
113 114 1.073964 GACGGGCTCCTTAAACGAAC 58.926 55.000 0.00 0.00 0.00 3.95
114 115 0.971386 AGACGGGCTCCTTAAACGAA 59.029 50.000 0.00 0.00 0.00 3.85
115 116 0.245539 CAGACGGGCTCCTTAAACGA 59.754 55.000 0.00 0.00 0.00 3.85
116 117 0.739813 CCAGACGGGCTCCTTAAACG 60.740 60.000 0.00 0.00 0.00 3.60
117 118 0.611714 TCCAGACGGGCTCCTTAAAC 59.388 55.000 0.00 0.00 36.21 2.01
118 119 1.485066 GATCCAGACGGGCTCCTTAAA 59.515 52.381 0.00 0.00 36.21 1.52
119 120 1.120530 GATCCAGACGGGCTCCTTAA 58.879 55.000 0.00 0.00 36.21 1.85
120 121 0.032515 TGATCCAGACGGGCTCCTTA 60.033 55.000 0.00 0.00 36.21 2.69
121 122 0.909610 TTGATCCAGACGGGCTCCTT 60.910 55.000 0.00 0.00 36.21 3.36
122 123 0.909610 TTTGATCCAGACGGGCTCCT 60.910 55.000 0.00 0.00 36.21 3.69
123 124 0.035439 TTTTGATCCAGACGGGCTCC 60.035 55.000 0.00 0.00 36.21 4.70
124 125 1.821216 TTTTTGATCCAGACGGGCTC 58.179 50.000 0.00 0.00 36.21 4.70
140 141 1.871039 CACTGACCGGTCACGATTTTT 59.129 47.619 33.23 10.16 44.60 1.94
141 142 1.069513 TCACTGACCGGTCACGATTTT 59.930 47.619 33.23 10.37 44.60 1.82
142 143 0.677288 TCACTGACCGGTCACGATTT 59.323 50.000 33.23 12.15 44.60 2.17
143 144 0.038526 GTCACTGACCGGTCACGATT 60.039 55.000 33.23 14.69 44.60 3.34
144 145 1.585006 GTCACTGACCGGTCACGAT 59.415 57.895 33.23 18.41 44.60 3.73
145 146 2.558286 GGTCACTGACCGGTCACGA 61.558 63.158 33.23 27.00 43.14 4.35
146 147 2.049433 GGTCACTGACCGGTCACG 60.049 66.667 33.23 27.66 43.14 4.35
154 155 4.736896 GGCCGTCCGGTCACTGAC 62.737 72.222 5.28 0.00 40.19 3.51
180 181 2.159819 ATAGCCAGGCGCCTCATACG 62.160 60.000 30.29 15.64 38.78 3.06
181 182 0.895530 TATAGCCAGGCGCCTCATAC 59.104 55.000 30.29 16.29 38.78 2.39
182 183 1.186200 CTATAGCCAGGCGCCTCATA 58.814 55.000 30.29 19.72 38.78 2.15
183 184 0.542938 TCTATAGCCAGGCGCCTCAT 60.543 55.000 30.29 19.20 38.78 2.90
184 185 0.542938 ATCTATAGCCAGGCGCCTCA 60.543 55.000 30.29 12.85 38.78 3.86
185 186 0.108424 CATCTATAGCCAGGCGCCTC 60.108 60.000 30.29 17.64 38.78 4.70
186 187 1.978473 CATCTATAGCCAGGCGCCT 59.022 57.895 27.08 27.08 38.78 5.52
187 188 1.743252 GCATCTATAGCCAGGCGCC 60.743 63.158 21.89 21.89 38.78 6.53
188 189 0.739112 GAGCATCTATAGCCAGGCGC 60.739 60.000 5.55 0.00 37.98 6.53
189 190 3.432517 GAGCATCTATAGCCAGGCG 57.567 57.895 5.55 0.00 0.00 5.52
205 206 2.299993 TGCCGAGCTCACATTAAGAG 57.700 50.000 15.40 0.00 36.21 2.85
206 207 2.760634 TTGCCGAGCTCACATTAAGA 57.239 45.000 15.40 0.00 0.00 2.10
207 208 3.829886 TTTTGCCGAGCTCACATTAAG 57.170 42.857 15.40 0.00 0.00 1.85
208 209 5.645929 TCTTATTTTGCCGAGCTCACATTAA 59.354 36.000 15.40 8.93 0.00 1.40
209 210 5.182487 TCTTATTTTGCCGAGCTCACATTA 58.818 37.500 15.40 3.03 0.00 1.90
210 211 4.009675 TCTTATTTTGCCGAGCTCACATT 58.990 39.130 15.40 2.67 0.00 2.71
211 212 3.609853 TCTTATTTTGCCGAGCTCACAT 58.390 40.909 15.40 0.00 0.00 3.21
212 213 3.002791 CTCTTATTTTGCCGAGCTCACA 58.997 45.455 15.40 8.52 0.00 3.58
213 214 2.352960 CCTCTTATTTTGCCGAGCTCAC 59.647 50.000 15.40 5.61 0.00 3.51
214 215 2.632377 CCTCTTATTTTGCCGAGCTCA 58.368 47.619 15.40 0.00 0.00 4.26
215 216 1.943340 CCCTCTTATTTTGCCGAGCTC 59.057 52.381 2.73 2.73 0.00 4.09
216 217 1.408822 CCCCTCTTATTTTGCCGAGCT 60.409 52.381 0.00 0.00 0.00 4.09
217 218 1.025041 CCCCTCTTATTTTGCCGAGC 58.975 55.000 0.00 0.00 0.00 5.03
218 219 2.092914 AGACCCCTCTTATTTTGCCGAG 60.093 50.000 0.00 0.00 0.00 4.63
219 220 1.913419 AGACCCCTCTTATTTTGCCGA 59.087 47.619 0.00 0.00 0.00 5.54
220 221 2.420058 AGACCCCTCTTATTTTGCCG 57.580 50.000 0.00 0.00 0.00 5.69
221 222 3.193479 CACAAGACCCCTCTTATTTTGCC 59.807 47.826 0.00 0.00 34.74 4.52
222 223 4.079253 TCACAAGACCCCTCTTATTTTGC 58.921 43.478 0.00 0.00 34.74 3.68
223 224 5.945784 TCATCACAAGACCCCTCTTATTTTG 59.054 40.000 0.00 0.00 34.74 2.44
224 225 6.139679 TCATCACAAGACCCCTCTTATTTT 57.860 37.500 0.00 0.00 34.74 1.82
225 226 5.779241 TCATCACAAGACCCCTCTTATTT 57.221 39.130 0.00 0.00 34.74 1.40
226 227 5.779241 TTCATCACAAGACCCCTCTTATT 57.221 39.130 0.00 0.00 34.74 1.40
227 228 5.779241 TTTCATCACAAGACCCCTCTTAT 57.221 39.130 0.00 0.00 34.74 1.73
228 229 5.313712 GTTTTCATCACAAGACCCCTCTTA 58.686 41.667 0.00 0.00 34.74 2.10
229 230 4.145052 GTTTTCATCACAAGACCCCTCTT 58.855 43.478 0.00 0.00 37.19 2.85
230 231 3.756117 GTTTTCATCACAAGACCCCTCT 58.244 45.455 0.00 0.00 0.00 3.69
231 232 2.484264 CGTTTTCATCACAAGACCCCTC 59.516 50.000 0.00 0.00 0.00 4.30
232 233 2.504367 CGTTTTCATCACAAGACCCCT 58.496 47.619 0.00 0.00 0.00 4.79
233 234 1.539827 CCGTTTTCATCACAAGACCCC 59.460 52.381 0.00 0.00 0.00 4.95
234 235 1.068541 GCCGTTTTCATCACAAGACCC 60.069 52.381 0.00 0.00 0.00 4.46
235 236 1.880027 AGCCGTTTTCATCACAAGACC 59.120 47.619 0.00 0.00 0.00 3.85
236 237 4.946784 ATAGCCGTTTTCATCACAAGAC 57.053 40.909 0.00 0.00 0.00 3.01
237 238 5.730550 ACTATAGCCGTTTTCATCACAAGA 58.269 37.500 0.00 0.00 0.00 3.02
238 239 6.092122 TCAACTATAGCCGTTTTCATCACAAG 59.908 38.462 0.00 0.00 0.00 3.16
239 240 5.935206 TCAACTATAGCCGTTTTCATCACAA 59.065 36.000 0.00 0.00 0.00 3.33
240 241 5.483811 TCAACTATAGCCGTTTTCATCACA 58.516 37.500 0.00 0.00 0.00 3.58
241 242 5.006746 CCTCAACTATAGCCGTTTTCATCAC 59.993 44.000 0.00 0.00 0.00 3.06
242 243 5.116180 CCTCAACTATAGCCGTTTTCATCA 58.884 41.667 0.00 0.00 0.00 3.07
243 244 4.511826 CCCTCAACTATAGCCGTTTTCATC 59.488 45.833 0.00 0.00 0.00 2.92
244 245 4.080526 ACCCTCAACTATAGCCGTTTTCAT 60.081 41.667 0.00 0.00 0.00 2.57
245 246 3.262405 ACCCTCAACTATAGCCGTTTTCA 59.738 43.478 0.00 0.00 0.00 2.69
246 247 3.621715 CACCCTCAACTATAGCCGTTTTC 59.378 47.826 0.00 0.00 0.00 2.29
247 248 3.008704 ACACCCTCAACTATAGCCGTTTT 59.991 43.478 0.00 0.00 0.00 2.43
248 249 2.570302 ACACCCTCAACTATAGCCGTTT 59.430 45.455 0.00 0.00 0.00 3.60
249 250 2.185387 ACACCCTCAACTATAGCCGTT 58.815 47.619 0.00 0.00 0.00 4.44
250 251 1.861982 ACACCCTCAACTATAGCCGT 58.138 50.000 0.00 0.00 0.00 5.68
251 252 2.981859 AACACCCTCAACTATAGCCG 57.018 50.000 0.00 0.00 0.00 5.52
277 278 8.032451 CCATCGTAAGGTTGGTGATTTTATTTT 58.968 33.333 0.00 0.00 36.61 1.82
278 279 7.394923 TCCATCGTAAGGTTGGTGATTTTATTT 59.605 33.333 0.00 0.00 40.50 1.40
279 280 6.887545 TCCATCGTAAGGTTGGTGATTTTATT 59.112 34.615 0.00 0.00 40.50 1.40
280 281 6.419791 TCCATCGTAAGGTTGGTGATTTTAT 58.580 36.000 0.00 0.00 40.50 1.40
281 282 5.806818 TCCATCGTAAGGTTGGTGATTTTA 58.193 37.500 0.00 0.00 40.50 1.52
282 283 4.658063 TCCATCGTAAGGTTGGTGATTTT 58.342 39.130 0.00 0.00 40.50 1.82
283 284 4.295141 TCCATCGTAAGGTTGGTGATTT 57.705 40.909 0.00 0.00 40.50 2.17
284 285 3.992943 TCCATCGTAAGGTTGGTGATT 57.007 42.857 0.00 0.00 40.50 2.57
285 286 3.992943 TTCCATCGTAAGGTTGGTGAT 57.007 42.857 0.00 0.00 40.50 3.06
286 287 3.605634 CATTCCATCGTAAGGTTGGTGA 58.394 45.455 0.00 0.00 40.50 4.02
287 288 2.097466 GCATTCCATCGTAAGGTTGGTG 59.903 50.000 0.00 0.00 40.50 4.17
288 289 2.290641 TGCATTCCATCGTAAGGTTGGT 60.291 45.455 0.00 0.00 40.50 3.67
289 290 2.364632 TGCATTCCATCGTAAGGTTGG 58.635 47.619 0.00 0.00 40.84 3.77
290 291 4.414852 CTTTGCATTCCATCGTAAGGTTG 58.585 43.478 0.00 0.00 38.47 3.77
291 292 3.443681 CCTTTGCATTCCATCGTAAGGTT 59.556 43.478 0.00 0.00 38.47 3.50
292 293 3.016736 CCTTTGCATTCCATCGTAAGGT 58.983 45.455 0.00 0.00 38.47 3.50
293 294 3.016736 ACCTTTGCATTCCATCGTAAGG 58.983 45.455 6.50 6.50 37.33 2.69
294 295 4.701956 AACCTTTGCATTCCATCGTAAG 57.298 40.909 0.00 0.00 0.00 2.34
295 296 6.576662 TTAAACCTTTGCATTCCATCGTAA 57.423 33.333 0.00 0.00 0.00 3.18
296 297 6.151985 ACATTAAACCTTTGCATTCCATCGTA 59.848 34.615 0.00 0.00 0.00 3.43
297 298 5.047377 ACATTAAACCTTTGCATTCCATCGT 60.047 36.000 0.00 0.00 0.00 3.73
298 299 5.289193 CACATTAAACCTTTGCATTCCATCG 59.711 40.000 0.00 0.00 0.00 3.84
299 300 5.581874 CCACATTAAACCTTTGCATTCCATC 59.418 40.000 0.00 0.00 0.00 3.51
300 301 5.490159 CCACATTAAACCTTTGCATTCCAT 58.510 37.500 0.00 0.00 0.00 3.41
301 302 4.802248 GCCACATTAAACCTTTGCATTCCA 60.802 41.667 0.00 0.00 0.00 3.53
302 303 3.684305 GCCACATTAAACCTTTGCATTCC 59.316 43.478 0.00 0.00 0.00 3.01
303 304 3.684305 GGCCACATTAAACCTTTGCATTC 59.316 43.478 0.00 0.00 0.00 2.67
304 305 3.673902 GGCCACATTAAACCTTTGCATT 58.326 40.909 0.00 0.00 0.00 3.56
305 306 2.353605 CGGCCACATTAAACCTTTGCAT 60.354 45.455 2.24 0.00 0.00 3.96
306 307 1.000283 CGGCCACATTAAACCTTTGCA 60.000 47.619 2.24 0.00 0.00 4.08
307 308 1.271102 TCGGCCACATTAAACCTTTGC 59.729 47.619 2.24 0.00 0.00 3.68
308 309 2.817258 TCTCGGCCACATTAAACCTTTG 59.183 45.455 2.24 0.00 0.00 2.77
309 310 3.149005 TCTCGGCCACATTAAACCTTT 57.851 42.857 2.24 0.00 0.00 3.11
310 311 2.871096 TCTCGGCCACATTAAACCTT 57.129 45.000 2.24 0.00 0.00 3.50
311 312 2.039879 ACTTCTCGGCCACATTAAACCT 59.960 45.455 2.24 0.00 0.00 3.50
312 313 2.433436 ACTTCTCGGCCACATTAAACC 58.567 47.619 2.24 0.00 0.00 3.27
313 314 4.226761 CAAACTTCTCGGCCACATTAAAC 58.773 43.478 2.24 0.00 0.00 2.01
314 315 3.886505 ACAAACTTCTCGGCCACATTAAA 59.113 39.130 2.24 0.00 0.00 1.52
315 316 3.482436 ACAAACTTCTCGGCCACATTAA 58.518 40.909 2.24 0.00 0.00 1.40
316 317 3.134574 ACAAACTTCTCGGCCACATTA 57.865 42.857 2.24 0.00 0.00 1.90
317 318 1.981256 ACAAACTTCTCGGCCACATT 58.019 45.000 2.24 0.00 0.00 2.71
318 319 2.851263 TACAAACTTCTCGGCCACAT 57.149 45.000 2.24 0.00 0.00 3.21
319 320 2.224426 ACATACAAACTTCTCGGCCACA 60.224 45.455 2.24 0.00 0.00 4.17
320 321 2.159627 CACATACAAACTTCTCGGCCAC 59.840 50.000 2.24 0.00 0.00 5.01
321 322 2.422597 CACATACAAACTTCTCGGCCA 58.577 47.619 2.24 0.00 0.00 5.36
322 323 1.737793 CCACATACAAACTTCTCGGCC 59.262 52.381 0.00 0.00 0.00 6.13
323 324 1.737793 CCCACATACAAACTTCTCGGC 59.262 52.381 0.00 0.00 0.00 5.54
324 325 2.742053 CACCCACATACAAACTTCTCGG 59.258 50.000 0.00 0.00 0.00 4.63
325 326 2.742053 CCACCCACATACAAACTTCTCG 59.258 50.000 0.00 0.00 0.00 4.04
326 327 4.003648 CTCCACCCACATACAAACTTCTC 58.996 47.826 0.00 0.00 0.00 2.87
327 328 3.394606 ACTCCACCCACATACAAACTTCT 59.605 43.478 0.00 0.00 0.00 2.85
328 329 3.751518 ACTCCACCCACATACAAACTTC 58.248 45.455 0.00 0.00 0.00 3.01
329 330 3.876309 ACTCCACCCACATACAAACTT 57.124 42.857 0.00 0.00 0.00 2.66
330 331 3.486383 CAACTCCACCCACATACAAACT 58.514 45.455 0.00 0.00 0.00 2.66
331 332 2.030274 GCAACTCCACCCACATACAAAC 60.030 50.000 0.00 0.00 0.00 2.93
332 333 2.235016 GCAACTCCACCCACATACAAA 58.765 47.619 0.00 0.00 0.00 2.83
333 334 1.143889 TGCAACTCCACCCACATACAA 59.856 47.619 0.00 0.00 0.00 2.41
334 335 0.767998 TGCAACTCCACCCACATACA 59.232 50.000 0.00 0.00 0.00 2.29
335 336 2.128771 ATGCAACTCCACCCACATAC 57.871 50.000 0.00 0.00 0.00 2.39
336 337 2.897271 AATGCAACTCCACCCACATA 57.103 45.000 0.00 0.00 0.00 2.29
337 338 2.014010 AAATGCAACTCCACCCACAT 57.986 45.000 0.00 0.00 0.00 3.21
338 339 1.686052 GAAAATGCAACTCCACCCACA 59.314 47.619 0.00 0.00 0.00 4.17
339 340 1.000843 GGAAAATGCAACTCCACCCAC 59.999 52.381 7.11 0.00 0.00 4.61
340 341 1.337118 GGAAAATGCAACTCCACCCA 58.663 50.000 7.11 0.00 0.00 4.51
341 342 1.000843 GTGGAAAATGCAACTCCACCC 59.999 52.381 24.50 9.33 43.52 4.61
342 343 2.438868 GTGGAAAATGCAACTCCACC 57.561 50.000 24.50 12.94 43.52 4.61
344 345 4.100653 TCAAATGTGGAAAATGCAACTCCA 59.899 37.500 9.97 9.97 0.00 3.86
345 346 4.630111 TCAAATGTGGAAAATGCAACTCC 58.370 39.130 0.00 0.00 0.00 3.85
346 347 5.349543 GGATCAAATGTGGAAAATGCAACTC 59.650 40.000 0.00 0.00 0.00 3.01
347 348 5.221682 TGGATCAAATGTGGAAAATGCAACT 60.222 36.000 0.00 0.00 0.00 3.16
348 349 4.996122 TGGATCAAATGTGGAAAATGCAAC 59.004 37.500 0.00 0.00 0.00 4.17
349 350 5.224821 TGGATCAAATGTGGAAAATGCAA 57.775 34.783 0.00 0.00 0.00 4.08
350 351 4.886496 TGGATCAAATGTGGAAAATGCA 57.114 36.364 0.00 0.00 0.00 3.96
351 352 6.746745 ATTTGGATCAAATGTGGAAAATGC 57.253 33.333 5.23 0.00 41.70 3.56
362 363 8.882282 TGCCCATATTTATCATTTGGATCAAAT 58.118 29.630 0.00 0.54 43.71 2.32
363 364 8.260099 TGCCCATATTTATCATTTGGATCAAA 57.740 30.769 0.00 0.00 37.75 2.69
364 365 7.852550 TGCCCATATTTATCATTTGGATCAA 57.147 32.000 0.00 0.00 37.44 2.57
365 366 7.852550 TTGCCCATATTTATCATTTGGATCA 57.147 32.000 0.00 0.00 37.44 2.92
366 367 7.279313 GCATTGCCCATATTTATCATTTGGATC 59.721 37.037 0.00 0.00 37.44 3.36
367 368 7.107542 GCATTGCCCATATTTATCATTTGGAT 58.892 34.615 0.00 0.00 40.14 3.41
368 369 6.042897 TGCATTGCCCATATTTATCATTTGGA 59.957 34.615 6.12 0.00 0.00 3.53
369 370 6.148150 GTGCATTGCCCATATTTATCATTTGG 59.852 38.462 6.12 0.00 0.00 3.28
370 371 6.148150 GGTGCATTGCCCATATTTATCATTTG 59.852 38.462 6.12 0.00 0.00 2.32
371 372 6.043474 AGGTGCATTGCCCATATTTATCATTT 59.957 34.615 15.64 0.00 0.00 2.32
372 373 5.544948 AGGTGCATTGCCCATATTTATCATT 59.455 36.000 15.64 0.00 0.00 2.57
373 374 5.088730 AGGTGCATTGCCCATATTTATCAT 58.911 37.500 15.64 0.00 0.00 2.45
374 375 4.482030 AGGTGCATTGCCCATATTTATCA 58.518 39.130 15.64 0.00 0.00 2.15
375 376 6.780457 ATAGGTGCATTGCCCATATTTATC 57.220 37.500 15.64 0.00 0.00 1.75
376 377 7.413446 AGTATAGGTGCATTGCCCATATTTAT 58.587 34.615 15.64 8.54 0.00 1.40
377 378 6.789268 AGTATAGGTGCATTGCCCATATTTA 58.211 36.000 15.64 3.04 0.00 1.40
378 379 5.644188 AGTATAGGTGCATTGCCCATATTT 58.356 37.500 15.64 0.00 0.00 1.40
379 380 5.261040 AGTATAGGTGCATTGCCCATATT 57.739 39.130 15.64 7.71 0.00 1.28
380 381 4.934797 AGTATAGGTGCATTGCCCATAT 57.065 40.909 15.64 10.31 0.00 1.78
381 382 5.514136 GGTTAGTATAGGTGCATTGCCCATA 60.514 44.000 15.64 3.75 0.00 2.74
382 383 4.398319 GTTAGTATAGGTGCATTGCCCAT 58.602 43.478 15.64 1.55 0.00 4.00
383 384 3.434453 GGTTAGTATAGGTGCATTGCCCA 60.434 47.826 15.64 5.36 0.00 5.36
384 385 3.146847 GGTTAGTATAGGTGCATTGCCC 58.853 50.000 6.12 7.10 0.00 5.36
385 386 3.815401 CAGGTTAGTATAGGTGCATTGCC 59.185 47.826 6.12 0.00 0.00 4.52
386 387 4.703897 TCAGGTTAGTATAGGTGCATTGC 58.296 43.478 0.46 0.46 0.00 3.56
387 388 6.524734 TGATCAGGTTAGTATAGGTGCATTG 58.475 40.000 0.00 0.00 0.00 2.82
388 389 6.239714 CCTGATCAGGTTAGTATAGGTGCATT 60.240 42.308 30.55 0.00 43.61 3.56
389 390 5.247110 CCTGATCAGGTTAGTATAGGTGCAT 59.753 44.000 30.55 0.00 43.61 3.96
390 391 4.588951 CCTGATCAGGTTAGTATAGGTGCA 59.411 45.833 30.55 0.00 43.61 4.57
391 392 5.140747 CCTGATCAGGTTAGTATAGGTGC 57.859 47.826 30.55 0.00 43.61 5.01
405 406 1.407979 GATTTTGCCTGGCCTGATCAG 59.592 52.381 17.53 16.24 0.00 2.90
406 407 1.272592 TGATTTTGCCTGGCCTGATCA 60.273 47.619 17.53 17.95 0.00 2.92
407 408 1.477553 TGATTTTGCCTGGCCTGATC 58.522 50.000 17.53 15.69 0.00 2.92
408 409 2.170012 ATGATTTTGCCTGGCCTGAT 57.830 45.000 17.53 6.85 0.00 2.90
409 410 2.241941 TCTATGATTTTGCCTGGCCTGA 59.758 45.455 17.53 1.48 0.00 3.86
410 411 2.621998 CTCTATGATTTTGCCTGGCCTG 59.378 50.000 17.53 2.54 0.00 4.85
411 412 2.243221 ACTCTATGATTTTGCCTGGCCT 59.757 45.455 17.53 0.00 0.00 5.19
412 413 2.360165 CACTCTATGATTTTGCCTGGCC 59.640 50.000 17.53 0.00 0.00 5.36
413 414 3.282021 TCACTCTATGATTTTGCCTGGC 58.718 45.455 12.87 12.87 29.99 4.85
414 415 5.902613 TTTCACTCTATGATTTTGCCTGG 57.097 39.130 0.00 0.00 37.11 4.45
424 425 7.066284 GCTAAGCTTGGAATTTTCACTCTATGA 59.934 37.037 14.82 0.00 34.65 2.15
426 427 6.319911 GGCTAAGCTTGGAATTTTCACTCTAT 59.680 38.462 14.82 0.00 0.00 1.98
428 429 4.460731 GGCTAAGCTTGGAATTTTCACTCT 59.539 41.667 14.82 0.00 0.00 3.24
434 435 2.833943 CCAGGGCTAAGCTTGGAATTTT 59.166 45.455 14.82 0.00 36.11 1.82
436 437 1.640670 TCCAGGGCTAAGCTTGGAATT 59.359 47.619 14.82 0.00 38.51 2.17
439 440 1.899437 CGTCCAGGGCTAAGCTTGGA 61.899 60.000 14.82 6.21 38.89 3.53
446 447 3.072468 CGGGTCGTCCAGGGCTAA 61.072 66.667 0.04 0.00 34.36 3.09
450 451 2.047560 GTTTCGGGTCGTCCAGGG 60.048 66.667 0.04 0.00 34.36 4.45
550 552 8.329203 ACAAAGCTCAAAATGTGGTTTAAAAA 57.671 26.923 8.64 0.00 38.83 1.94
551 553 7.913674 ACAAAGCTCAAAATGTGGTTTAAAA 57.086 28.000 8.64 0.00 38.83 1.52
560 562 2.545742 GGCCGAACAAAGCTCAAAATGT 60.546 45.455 0.00 0.00 0.00 2.71
563 565 1.398692 AGGCCGAACAAAGCTCAAAA 58.601 45.000 0.00 0.00 0.00 2.44
568 570 1.949257 CGAAAGGCCGAACAAAGCT 59.051 52.632 0.00 0.00 0.00 3.74
581 583 3.127533 CGAAGCCCAGCCCGAAAG 61.128 66.667 0.00 0.00 0.00 2.62
582 584 4.715523 CCGAAGCCCAGCCCGAAA 62.716 66.667 1.33 0.00 0.00 3.46
591 593 4.315941 CTATCCCGCCCGAAGCCC 62.316 72.222 0.00 0.00 38.78 5.19
592 594 4.315941 CCTATCCCGCCCGAAGCC 62.316 72.222 0.00 0.00 38.78 4.35
593 595 3.516866 GACCTATCCCGCCCGAAGC 62.517 68.421 0.00 0.00 38.52 3.86
594 596 2.735237 GACCTATCCCGCCCGAAG 59.265 66.667 0.00 0.00 0.00 3.79
597 599 3.671411 CTCGACCTATCCCGCCCG 61.671 72.222 0.00 0.00 0.00 6.13
606 626 4.950479 GGTCTCGGACTCGACCTA 57.050 61.111 7.47 0.00 44.90 3.08
617 637 1.081892 CAACATCTTGGCTGGTCTCG 58.918 55.000 0.00 0.00 0.00 4.04
628 648 1.707427 AGCCCAAGAGACCAACATCTT 59.293 47.619 0.00 0.00 36.19 2.40
679 699 2.870411 CCCATATTTCTTCGTTCCGGTC 59.130 50.000 0.00 0.00 0.00 4.79
680 700 2.914059 CCCATATTTCTTCGTTCCGGT 58.086 47.619 0.00 0.00 0.00 5.28
681 701 1.602377 GCCCATATTTCTTCGTTCCGG 59.398 52.381 0.00 0.00 0.00 5.14
682 702 2.285083 TGCCCATATTTCTTCGTTCCG 58.715 47.619 0.00 0.00 0.00 4.30
684 704 4.044426 GCATTGCCCATATTTCTTCGTTC 58.956 43.478 0.00 0.00 0.00 3.95
685 705 3.446873 TGCATTGCCCATATTTCTTCGTT 59.553 39.130 6.12 0.00 0.00 3.85
686 706 3.023119 TGCATTGCCCATATTTCTTCGT 58.977 40.909 6.12 0.00 0.00 3.85
687 707 3.067180 AGTGCATTGCCCATATTTCTTCG 59.933 43.478 6.12 0.00 0.00 3.79
760 946 3.888930 AGCAGAATTCTTCCGTTCCAAAA 59.111 39.130 4.86 0.00 0.00 2.44
763 949 2.859165 AGCAGAATTCTTCCGTTCCA 57.141 45.000 4.86 0.00 0.00 3.53
766 952 3.437049 GCAACTAGCAGAATTCTTCCGTT 59.563 43.478 4.86 5.02 44.79 4.44
920 1114 2.359900 CGCTTATGCCCCTGATAATCC 58.640 52.381 0.00 0.00 35.36 3.01
921 1115 1.740025 GCGCTTATGCCCCTGATAATC 59.260 52.381 0.00 0.00 35.36 1.75
923 1117 0.472044 TGCGCTTATGCCCCTGATAA 59.528 50.000 9.73 0.00 35.36 1.75
926 1120 0.035317 CTATGCGCTTATGCCCCTGA 59.965 55.000 9.73 0.00 35.36 3.86
927 1121 1.580845 GCTATGCGCTTATGCCCCTG 61.581 60.000 9.73 0.00 35.36 4.45
930 1124 0.449388 GATGCTATGCGCTTATGCCC 59.551 55.000 9.73 4.27 40.11 5.36
931 1125 1.159285 TGATGCTATGCGCTTATGCC 58.841 50.000 9.73 0.00 40.11 4.40
932 1126 2.417586 TGATGATGCTATGCGCTTATGC 59.582 45.455 9.73 12.50 40.11 3.14
934 1128 3.055602 TCCTGATGATGCTATGCGCTTAT 60.056 43.478 9.73 0.00 40.11 1.73
935 1129 2.299867 TCCTGATGATGCTATGCGCTTA 59.700 45.455 9.73 5.78 40.11 3.09
937 1131 0.683412 TCCTGATGATGCTATGCGCT 59.317 50.000 9.73 0.00 40.11 5.92
938 1132 1.735386 ATCCTGATGATGCTATGCGC 58.265 50.000 0.00 0.00 39.77 6.09
939 1133 6.927381 TGATATAATCCTGATGATGCTATGCG 59.073 38.462 0.00 0.00 32.68 4.73
974 1186 1.033746 AATCCAAGGCAGATGGCGTG 61.034 55.000 13.93 13.93 46.35 5.34
1060 1272 0.961358 AGAACGAGTGGGACGAGGAG 60.961 60.000 0.00 0.00 34.70 3.69
1100 1312 2.937379 CTTGCTCCTCCGGCTCCATG 62.937 65.000 0.00 0.00 0.00 3.66
1195 1407 1.801302 AAGGAGACGTGAGGGAGGGA 61.801 60.000 0.00 0.00 0.00 4.20
1225 1437 2.269562 CCGGCCGTGTTTATGGGA 59.730 61.111 26.12 0.00 33.30 4.37
1228 1440 2.110352 GGTCCCGGCCGTGTTTATG 61.110 63.158 26.12 6.34 0.00 1.90
1229 1441 2.248086 GAGGTCCCGGCCGTGTTTAT 62.248 60.000 26.12 4.91 0.00 1.40
1309 1521 4.451150 GTGCGTGCGGAGGATGGA 62.451 66.667 0.00 0.00 34.61 3.41
1312 1524 4.796231 GTCGTGCGTGCGGAGGAT 62.796 66.667 11.13 0.00 33.39 3.24
1678 1890 1.021390 CCCAGGAGCGACATGTTGAC 61.021 60.000 17.70 9.37 0.00 3.18
1953 2168 5.839621 TGCGGAAGTATTGGAGTAGTAATC 58.160 41.667 0.00 0.00 0.00 1.75
1973 2189 4.484236 TGGATTAATTTGTCAGCTTTGCG 58.516 39.130 0.00 0.00 0.00 4.85
1979 2195 4.736793 CGCTGAATGGATTAATTTGTCAGC 59.263 41.667 22.07 22.07 42.96 4.26
2182 2401 3.597255 TGTGACCACGTCTTGTTGTAAA 58.403 40.909 0.00 0.00 33.15 2.01
2184 2403 2.427812 TCTGTGACCACGTCTTGTTGTA 59.572 45.455 0.00 0.00 33.15 2.41
2203 2422 4.116585 TCGCCGAGCTCCTCCTCT 62.117 66.667 8.47 0.00 0.00 3.69
2289 2508 2.365768 GAGAGGTGGGGGAGGACC 60.366 72.222 0.00 0.00 39.11 4.46
2290 2509 2.591193 ATCGAGAGGTGGGGGAGGAC 62.591 65.000 0.00 0.00 0.00 3.85
2291 2510 2.299727 GATCGAGAGGTGGGGGAGGA 62.300 65.000 0.00 0.00 0.00 3.71
2292 2511 1.834822 GATCGAGAGGTGGGGGAGG 60.835 68.421 0.00 0.00 0.00 4.30
2293 2512 2.196925 CGATCGAGAGGTGGGGGAG 61.197 68.421 10.26 0.00 0.00 4.30
2294 2513 2.123854 CGATCGAGAGGTGGGGGA 60.124 66.667 10.26 0.00 0.00 4.81
2295 2514 3.917760 GCGATCGAGAGGTGGGGG 61.918 72.222 21.57 0.00 0.00 5.40
2296 2515 3.917760 GGCGATCGAGAGGTGGGG 61.918 72.222 21.57 0.00 0.00 4.96
2472 2691 2.618709 CGGCAGAAACTCAAAGTCCTTT 59.381 45.455 0.00 0.00 0.00 3.11
2535 2754 1.795768 TCATCTCAACGGCAGTGTTC 58.204 50.000 0.00 0.00 0.00 3.18
2547 2766 2.034878 AGGTTCGCTAGCATCATCTCA 58.965 47.619 16.45 0.00 0.00 3.27
2621 2840 0.861837 CGACAAGCTGAACACCTCAC 59.138 55.000 0.00 0.00 0.00 3.51
2625 2844 1.079503 GGATCGACAAGCTGAACACC 58.920 55.000 0.00 0.00 0.00 4.16
2725 3711 7.225784 TGATTGCACACACCTAATTAAATGT 57.774 32.000 0.00 0.00 0.00 2.71
2739 3725 3.302555 CATATGCGGATTGATTGCACAC 58.697 45.455 0.00 0.00 42.11 3.82
2740 3726 2.287728 GCATATGCGGATTGATTGCACA 60.288 45.455 12.82 0.00 42.11 4.57
2760 3746 7.272978 TGTATTATCTTGTAAGGTCTTGGAGC 58.727 38.462 0.00 0.00 0.00 4.70
2777 3763 9.937175 GTGGCTTCTGACTTTTTATGTATTATC 57.063 33.333 0.00 0.00 0.00 1.75
2839 3827 3.956199 CACATAATCTGCACCCCTTCATT 59.044 43.478 0.00 0.00 0.00 2.57
2862 3850 4.430765 AGGTCAAGGTACGCGGCG 62.431 66.667 22.36 22.36 0.00 6.46
2864 3852 1.445582 GTGAGGTCAAGGTACGCGG 60.446 63.158 12.47 0.00 0.00 6.46
2944 3936 4.996434 AGTGTGCCGAGCAGGTGC 62.996 66.667 0.00 0.00 40.08 5.01
2952 3944 0.601558 GACCACTAAGAGTGTGCCGA 59.398 55.000 5.92 0.00 44.50 5.54
3036 4028 1.639298 GGCAAGGTCGATGTGTCAGC 61.639 60.000 0.00 0.00 0.00 4.26
3174 4217 1.001633 GAGGTGGTGTTAGCGAAGGAA 59.998 52.381 0.00 0.00 0.00 3.36
3183 4226 2.527123 TGGCGGGAGGTGGTGTTA 60.527 61.111 0.00 0.00 0.00 2.41
3196 4239 4.489771 GGGATGGGACCAGTGGCG 62.490 72.222 9.78 0.00 0.00 5.69
3243 4286 4.078516 GCCGCCTAGGGTGTTCGT 62.079 66.667 11.72 0.00 41.48 3.85
3261 4304 0.250338 GTCGTGCCCTTCTTGAAGGT 60.250 55.000 23.12 0.00 38.28 3.50
3265 4308 1.305201 GTTTGTCGTGCCCTTCTTGA 58.695 50.000 0.00 0.00 0.00 3.02
3285 4328 1.227556 GATTGGGCGGCGACACTAT 60.228 57.895 17.61 7.69 0.00 2.12
3291 4334 4.161295 CCTCAGATTGGGCGGCGA 62.161 66.667 12.98 0.00 0.00 5.54
3345 4391 1.032657 CGTCGATGTCCCTCCTCTGT 61.033 60.000 0.00 0.00 0.00 3.41
3358 4404 0.317160 TTCTTGCAGGTGTCGTCGAT 59.683 50.000 0.00 0.00 0.00 3.59
3365 4411 1.071471 CGACCCTTCTTGCAGGTGT 59.929 57.895 0.00 0.00 32.81 4.16
3367 4413 2.032681 GCGACCCTTCTTGCAGGT 59.967 61.111 0.00 0.00 36.31 4.00
3418 4482 4.695928 GGTAGAGGTGGATTCAGACAAAAC 59.304 45.833 0.00 0.00 0.00 2.43
3422 4486 3.099905 CTGGTAGAGGTGGATTCAGACA 58.900 50.000 0.00 0.00 0.00 3.41
3426 4490 1.204146 GGCTGGTAGAGGTGGATTCA 58.796 55.000 0.00 0.00 0.00 2.57
3472 4537 0.827507 ATTTGGTGGCTTGCGGTCTT 60.828 50.000 0.00 0.00 0.00 3.01
3499 4564 2.556114 CCTCCCCATTGCAGACTTTCTT 60.556 50.000 0.00 0.00 0.00 2.52
3503 4568 1.075601 TTCCTCCCCATTGCAGACTT 58.924 50.000 0.00 0.00 0.00 3.01
3506 4571 1.063717 GGATTTCCTCCCCATTGCAGA 60.064 52.381 0.00 0.00 38.19 4.26
3512 4577 1.922821 CGGTGGATTTCCTCCCCAT 59.077 57.895 11.20 0.00 44.69 4.00
3513 4578 2.978946 GCGGTGGATTTCCTCCCCA 61.979 63.158 11.20 0.00 44.69 4.96
3578 4644 0.534412 AGAACTCTGGGATCTGTGCG 59.466 55.000 0.00 0.00 0.00 5.34
3581 4647 2.183679 GTGGAGAACTCTGGGATCTGT 58.816 52.381 0.00 0.00 0.00 3.41
3583 4649 1.006043 TCGTGGAGAACTCTGGGATCT 59.994 52.381 1.86 0.00 0.00 2.75
3584 4650 1.407258 CTCGTGGAGAACTCTGGGATC 59.593 57.143 1.86 0.00 0.00 3.36
3585 4651 1.479709 CTCGTGGAGAACTCTGGGAT 58.520 55.000 1.86 0.00 0.00 3.85
3586 4652 0.612174 CCTCGTGGAGAACTCTGGGA 60.612 60.000 0.00 0.00 34.57 4.37
3587 4653 0.612174 TCCTCGTGGAGAACTCTGGG 60.612 60.000 1.10 0.00 37.46 4.45
3593 4659 1.975407 TCCGGTCCTCGTGGAGAAC 60.975 63.158 6.43 0.00 44.16 3.01
3602 4668 3.878519 CTCGTCGCTCCGGTCCTC 61.879 72.222 0.00 0.00 0.00 3.71
3606 4672 2.124653 AGATCTCGTCGCTCCGGT 60.125 61.111 0.00 0.00 0.00 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.