Multiple sequence alignment - TraesCS2B01G483200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G483200 chr2B 100.000 6927 0 0 1 6927 680579367 680572441 0.000000e+00 12792.0
1 TraesCS2B01G483200 chr2B 88.907 1857 158 22 3180 5019 680538501 680536676 0.000000e+00 2244.0
2 TraesCS2B01G483200 chr2B 98.262 863 14 1 1 862 512302818 512301956 0.000000e+00 1509.0
3 TraesCS2B01G483200 chr2B 92.391 184 7 3 5492 5671 680536363 680536183 8.920000e-64 255.0
4 TraesCS2B01G483200 chr2B 83.636 220 23 8 5060 5275 680536679 680536469 1.970000e-45 195.0
5 TraesCS2B01G483200 chr2B 89.873 79 4 3 6153 6231 680522430 680522356 1.590000e-16 99.0
6 TraesCS2B01G483200 chr2B 87.952 83 6 1 5279 5361 657077650 657077572 2.060000e-15 95.3
7 TraesCS2B01G483200 chr2B 85.106 94 12 1 4018 4109 680408409 680408316 2.060000e-15 95.3
8 TraesCS2B01G483200 chr2B 80.328 122 14 7 2862 2975 680060301 680060182 4.450000e-12 84.2
9 TraesCS2B01G483200 chr2A 94.652 3104 123 18 2179 5275 707302178 707299111 0.000000e+00 4772.0
10 TraesCS2B01G483200 chr2A 89.669 1268 74 28 859 2095 707303418 707302177 0.000000e+00 1563.0
11 TraesCS2B01G483200 chr2A 98.129 855 14 1 9 861 144864258 144865112 0.000000e+00 1489.0
12 TraesCS2B01G483200 chr2A 87.838 592 52 12 5360 5941 707299112 707298531 0.000000e+00 676.0
13 TraesCS2B01G483200 chr2A 86.076 158 16 3 6074 6231 707235485 707235334 1.550000e-36 165.0
14 TraesCS2B01G483200 chr2A 83.607 122 11 5 6740 6861 707235118 707235006 9.500000e-19 106.0
15 TraesCS2B01G483200 chr2A 89.610 77 4 4 6153 6229 707269934 707269862 2.060000e-15 95.3
16 TraesCS2B01G483200 chr2A 86.765 68 3 3 4760 4822 707068215 707068149 3.470000e-08 71.3
17 TraesCS2B01G483200 chr2A 91.892 37 0 1 6894 6927 707234971 707234935 1.600000e-01 49.1
18 TraesCS2B01G483200 chr2D 94.500 3091 96 38 2158 5226 568081817 568078779 0.000000e+00 4698.0
19 TraesCS2B01G483200 chr2D 89.891 1286 77 31 859 2116 568083389 568082129 0.000000e+00 1605.0
20 TraesCS2B01G483200 chr2D 88.675 1298 111 18 3176 4462 567980465 567979193 0.000000e+00 1550.0
21 TraesCS2B01G483200 chr2D 90.420 762 43 11 5363 6105 568078736 568077986 0.000000e+00 976.0
22 TraesCS2B01G483200 chr2D 89.365 724 59 9 4555 5275 567979198 567978490 0.000000e+00 894.0
23 TraesCS2B01G483200 chr2D 89.775 577 43 8 5360 5928 567978491 567977923 0.000000e+00 725.0
24 TraesCS2B01G483200 chr2D 84.354 441 31 20 6495 6927 568077921 568077511 1.400000e-106 398.0
25 TraesCS2B01G483200 chr2D 80.663 181 21 7 5954 6132 567968006 567967838 2.030000e-25 128.0
26 TraesCS2B01G483200 chr2D 84.496 129 16 3 4018 4142 567633837 567633709 2.620000e-24 124.0
27 TraesCS2B01G483200 chr2D 93.976 83 1 1 6153 6231 568078000 568077918 9.440000e-24 122.0
28 TraesCS2B01G483200 chr2D 83.898 118 17 2 2862 2978 567049589 567049473 2.040000e-20 111.0
29 TraesCS2B01G483200 chr2D 81.203 133 16 6 4018 4142 567594278 567594147 1.590000e-16 99.0
30 TraesCS2B01G483200 chr2D 89.873 79 4 3 6153 6231 567787977 567787903 1.590000e-16 99.0
31 TraesCS2B01G483200 chr5B 98.256 860 15 0 1 860 415792968 415793827 0.000000e+00 1506.0
32 TraesCS2B01G483200 chr5B 97.909 861 18 0 1 861 580489450 580490310 0.000000e+00 1491.0
33 TraesCS2B01G483200 chr5B 95.094 265 5 2 6234 6498 544533175 544533431 1.800000e-110 411.0
34 TraesCS2B01G483200 chr5B 86.022 93 7 2 5285 5371 496570310 496570218 2.060000e-15 95.3
35 TraesCS2B01G483200 chr1B 98.368 858 13 1 1 858 543481711 543480855 0.000000e+00 1506.0
36 TraesCS2B01G483200 chr1B 94.074 270 8 2 6228 6497 449755211 449755472 3.010000e-108 403.0
37 TraesCS2B01G483200 chr1B 91.860 86 5 2 5284 5369 453344420 453344503 1.220000e-22 119.0
38 TraesCS2B01G483200 chr7A 98.252 858 14 1 1 858 256007313 256008169 0.000000e+00 1500.0
39 TraesCS2B01G483200 chr7A 87.162 148 19 0 4647 4794 30005073 30004926 1.190000e-37 169.0
40 TraesCS2B01G483200 chr3B 97.395 883 20 3 1 881 814366454 814367335 0.000000e+00 1500.0
41 TraesCS2B01G483200 chr3B 94.074 270 8 2 6228 6497 401220211 401219950 3.010000e-108 403.0
42 TraesCS2B01G483200 chr6B 98.019 858 17 0 1 858 715712501 715711644 0.000000e+00 1491.0
43 TraesCS2B01G483200 chr6B 85.047 214 30 2 4470 4682 255967573 255967361 4.210000e-52 217.0
44 TraesCS2B01G483200 chr4B 97.788 859 18 1 1 858 115079034 115079892 0.000000e+00 1480.0
45 TraesCS2B01G483200 chr3A 94.444 270 7 4 6229 6498 706429157 706428896 6.470000e-110 409.0
46 TraesCS2B01G483200 chr3A 94.096 271 8 2 6228 6498 234263108 234262846 8.370000e-109 405.0
47 TraesCS2B01G483200 chr4A 94.096 271 8 2 6228 6498 78157369 78157631 8.370000e-109 405.0
48 TraesCS2B01G483200 chr4A 94.096 271 8 3 6228 6498 690421054 690420792 8.370000e-109 405.0
49 TraesCS2B01G483200 chr4A 84.536 388 36 7 3315 3688 629938420 629938797 5.110000e-96 363.0
50 TraesCS2B01G483200 chr4A 91.573 178 12 1 3054 3231 629938230 629938404 6.940000e-60 243.0
51 TraesCS2B01G483200 chr4A 83.099 71 11 1 4218 4287 309510866 309510796 5.800000e-06 63.9
52 TraesCS2B01G483200 chr1A 93.796 274 9 2 6229 6502 62255713 62255978 8.370000e-109 405.0
53 TraesCS2B01G483200 chr6A 94.074 270 8 2 6228 6497 614497197 614497458 3.010000e-108 403.0
54 TraesCS2B01G483200 chr6A 87.952 83 5 1 5284 5361 573407647 573407729 7.400000e-15 93.5
55 TraesCS2B01G483200 chr4D 91.566 83 7 0 5279 5361 281181851 281181933 1.580000e-21 115.0
56 TraesCS2B01G483200 chr4D 91.463 82 7 0 5279 5360 444523968 444524049 5.680000e-21 113.0
57 TraesCS2B01G483200 chr5A 92.308 78 4 1 5284 5361 353851334 353851259 7.350000e-20 110.0
58 TraesCS2B01G483200 chr5A 90.909 77 5 1 5284 5360 353851279 353851353 1.230000e-17 102.0
59 TraesCS2B01G483200 chr5D 88.889 90 5 2 5279 5363 500135822 500135733 9.500000e-19 106.0
60 TraesCS2B01G483200 chr5D 100.000 32 0 0 4881 4912 383773545 383773576 7.500000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G483200 chr2B 680572441 680579367 6926 True 12792.000000 12792 100.000000 1 6927 1 chr2B.!!$R6 6926
1 TraesCS2B01G483200 chr2B 512301956 512302818 862 True 1509.000000 1509 98.262000 1 862 1 chr2B.!!$R1 861
2 TraesCS2B01G483200 chr2B 680536183 680538501 2318 True 898.000000 2244 88.311333 3180 5671 3 chr2B.!!$R7 2491
3 TraesCS2B01G483200 chr2A 707298531 707303418 4887 True 2337.000000 4772 90.719667 859 5941 3 chr2A.!!$R4 5082
4 TraesCS2B01G483200 chr2A 144864258 144865112 854 False 1489.000000 1489 98.129000 9 861 1 chr2A.!!$F1 852
5 TraesCS2B01G483200 chr2D 568077511 568083389 5878 True 1559.800000 4698 90.628200 859 6927 5 chr2D.!!$R7 6068
6 TraesCS2B01G483200 chr2D 567977923 567980465 2542 True 1056.333333 1550 89.271667 3176 5928 3 chr2D.!!$R6 2752
7 TraesCS2B01G483200 chr5B 415792968 415793827 859 False 1506.000000 1506 98.256000 1 860 1 chr5B.!!$F1 859
8 TraesCS2B01G483200 chr5B 580489450 580490310 860 False 1491.000000 1491 97.909000 1 861 1 chr5B.!!$F3 860
9 TraesCS2B01G483200 chr1B 543480855 543481711 856 True 1506.000000 1506 98.368000 1 858 1 chr1B.!!$R1 857
10 TraesCS2B01G483200 chr7A 256007313 256008169 856 False 1500.000000 1500 98.252000 1 858 1 chr7A.!!$F1 857
11 TraesCS2B01G483200 chr3B 814366454 814367335 881 False 1500.000000 1500 97.395000 1 881 1 chr3B.!!$F1 880
12 TraesCS2B01G483200 chr6B 715711644 715712501 857 True 1491.000000 1491 98.019000 1 858 1 chr6B.!!$R2 857
13 TraesCS2B01G483200 chr4B 115079034 115079892 858 False 1480.000000 1480 97.788000 1 858 1 chr4B.!!$F1 857
14 TraesCS2B01G483200 chr4A 629938230 629938797 567 False 303.000000 363 88.054500 3054 3688 2 chr4A.!!$F2 634

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
940 960 1.161563 TTTTCCAGCGGTTCGACACC 61.162 55.000 6.68 6.68 43.16 4.16 F
1112 1138 1.067283 CAGCAGCGGAGAAGAAGAAGA 60.067 52.381 0.00 0.00 0.00 2.87 F
1390 1418 1.222936 GTCCTGGATCTGTGCCTGG 59.777 63.158 0.00 0.00 43.65 4.45 F
2537 2862 0.961753 CTTTCACTGTTTGCTCCCCC 59.038 55.000 0.00 0.00 0.00 5.40 F
3569 3930 1.064017 TGGAAATCGGCAAGGGCTTAT 60.064 47.619 0.00 0.00 40.87 1.73 F
4678 5051 0.185901 TTGCAGGGTTCAAGGCTTCT 59.814 50.000 0.00 0.00 0.00 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2039 2080 1.143305 CTGGTGAGCGTTTGAGACTG 58.857 55.000 0.00 0.0 0.00 3.51 R
2130 2177 2.220313 CAAATTTGTTTGCACTGGGGG 58.780 47.619 10.15 0.0 0.00 5.40 R
3170 3502 1.402968 GACACATGACATGCCATGGAC 59.597 52.381 23.61 11.8 46.06 4.02 R
4174 4542 2.106511 CCAAGGTTTCCCTCAGAAGTCA 59.893 50.000 0.00 0.0 41.56 3.41 R
4958 5335 0.238289 CAACAAACTAGGCACCTGCG 59.762 55.000 0.00 0.0 43.26 5.18 R
6593 7019 0.035598 TCCCGTTCGAAAATCCAGCA 59.964 50.000 0.00 0.0 0.00 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
598 601 1.589727 GCACAAATGGGCATAGCGC 60.590 57.895 0.00 0.00 45.57 5.92
607 610 2.279517 GCATAGCGCGGCTACTGT 60.280 61.111 8.83 0.00 44.24 3.55
654 657 3.369892 GGAGAATGAGCTGGTAGCAAAGA 60.370 47.826 0.00 0.00 45.56 2.52
807 810 4.903045 AATCCGGTTTTAGACTTGAGGA 57.097 40.909 0.00 0.00 0.00 3.71
836 839 7.721409 TTTGATCCATCATGAAGGATTTGAA 57.279 32.000 28.35 20.42 44.44 2.69
846 849 4.551671 TGAAGGATTTGAAGGGGAAAACA 58.448 39.130 0.00 0.00 0.00 2.83
854 857 8.590204 GGATTTGAAGGGGAAAACAATACTTTA 58.410 33.333 0.00 0.00 0.00 1.85
905 908 2.677228 CAAGGATTGGGCCCGACT 59.323 61.111 16.21 4.82 43.94 4.18
908 911 2.513897 GGATTGGGCCCGACTTCG 60.514 66.667 16.21 0.00 39.44 3.79
909 912 2.267961 GATTGGGCCCGACTTCGT 59.732 61.111 16.21 0.00 37.74 3.85
910 913 1.376812 GATTGGGCCCGACTTCGTT 60.377 57.895 16.21 0.00 37.74 3.85
911 914 1.644786 GATTGGGCCCGACTTCGTTG 61.645 60.000 16.21 0.00 37.74 4.10
912 915 2.119484 ATTGGGCCCGACTTCGTTGA 62.119 55.000 16.21 0.00 37.74 3.18
940 960 1.161563 TTTTCCAGCGGTTCGACACC 61.162 55.000 6.68 6.68 43.16 4.16
1045 1065 1.905922 GCTCGGCAGCTCAACTCAAC 61.906 60.000 0.00 0.00 43.09 3.18
1112 1138 1.067283 CAGCAGCGGAGAAGAAGAAGA 60.067 52.381 0.00 0.00 0.00 2.87
1113 1139 1.620819 AGCAGCGGAGAAGAAGAAGAA 59.379 47.619 0.00 0.00 0.00 2.52
1114 1140 1.999024 GCAGCGGAGAAGAAGAAGAAG 59.001 52.381 0.00 0.00 0.00 2.85
1115 1141 2.353208 GCAGCGGAGAAGAAGAAGAAGA 60.353 50.000 0.00 0.00 0.00 2.87
1116 1142 3.510719 CAGCGGAGAAGAAGAAGAAGAG 58.489 50.000 0.00 0.00 0.00 2.85
1120 1146 3.428862 CGGAGAAGAAGAAGAAGAGGAGC 60.429 52.174 0.00 0.00 0.00 4.70
1156 1182 4.827087 ATGGCCAGCTCGTCTGCG 62.827 66.667 13.05 0.00 41.50 5.18
1224 1251 3.628832 CCCCCTCTCCTTTATCTCTCT 57.371 52.381 0.00 0.00 0.00 3.10
1291 1318 4.514577 CCGTCTGATCGCGGCCTT 62.515 66.667 6.13 0.00 41.53 4.35
1294 1321 1.447838 GTCTGATCGCGGCCTTGAA 60.448 57.895 6.13 0.00 0.00 2.69
1309 1336 3.399330 CCTTGAAGGCAAACTAGTCGAA 58.601 45.455 0.00 0.00 32.73 3.71
1310 1337 4.003648 CCTTGAAGGCAAACTAGTCGAAT 58.996 43.478 0.00 0.00 32.73 3.34
1312 1339 5.642063 CCTTGAAGGCAAACTAGTCGAATTA 59.358 40.000 0.00 0.00 32.73 1.40
1313 1340 6.183360 CCTTGAAGGCAAACTAGTCGAATTAG 60.183 42.308 0.00 0.00 32.73 1.73
1314 1341 6.032956 TGAAGGCAAACTAGTCGAATTAGA 57.967 37.500 11.10 0.00 0.00 2.10
1315 1342 6.460781 TGAAGGCAAACTAGTCGAATTAGAA 58.539 36.000 11.10 0.00 0.00 2.10
1317 1344 5.176592 AGGCAAACTAGTCGAATTAGAACC 58.823 41.667 11.10 7.10 0.00 3.62
1318 1345 5.046520 AGGCAAACTAGTCGAATTAGAACCT 60.047 40.000 11.10 8.69 0.00 3.50
1319 1346 6.154021 AGGCAAACTAGTCGAATTAGAACCTA 59.846 38.462 11.10 0.00 0.00 3.08
1320 1347 6.985059 GGCAAACTAGTCGAATTAGAACCTAT 59.015 38.462 11.10 0.00 0.00 2.57
1321 1348 7.169476 GGCAAACTAGTCGAATTAGAACCTATC 59.831 40.741 11.10 0.00 0.00 2.08
1322 1349 7.096558 GCAAACTAGTCGAATTAGAACCTATCG 60.097 40.741 11.10 0.00 34.98 2.92
1323 1350 6.557291 ACTAGTCGAATTAGAACCTATCGG 57.443 41.667 11.10 0.00 34.47 4.18
1356 1384 6.296803 TCTTCAGTAGAGTTTTTCTTTCCCC 58.703 40.000 0.00 0.00 37.36 4.81
1390 1418 1.222936 GTCCTGGATCTGTGCCTGG 59.777 63.158 0.00 0.00 43.65 4.45
1424 1452 3.929414 CGGAGCTAGCGATTTTCTTTTC 58.071 45.455 9.55 0.00 0.00 2.29
1426 1454 4.093556 CGGAGCTAGCGATTTTCTTTTCTT 59.906 41.667 9.55 0.00 0.00 2.52
1427 1455 5.390991 CGGAGCTAGCGATTTTCTTTTCTTT 60.391 40.000 9.55 0.00 0.00 2.52
1428 1456 6.024664 GGAGCTAGCGATTTTCTTTTCTTTC 58.975 40.000 9.55 0.00 0.00 2.62
1429 1457 6.128145 GGAGCTAGCGATTTTCTTTTCTTTCT 60.128 38.462 9.55 0.00 0.00 2.52
1432 1460 8.394121 AGCTAGCGATTTTCTTTTCTTTCTATG 58.606 33.333 9.55 0.00 0.00 2.23
1433 1461 8.391106 GCTAGCGATTTTCTTTTCTTTCTATGA 58.609 33.333 0.00 0.00 0.00 2.15
1436 1464 9.965824 AGCGATTTTCTTTTCTTTCTATGAAAA 57.034 25.926 0.00 0.00 39.96 2.29
1450 1478 1.317613 TGAAAAATCTGTGGCGCTGT 58.682 45.000 7.64 0.00 0.00 4.40
1481 1509 2.566833 TGGTGATCTCCAAGTGGTTG 57.433 50.000 14.08 0.00 34.24 3.77
1513 1548 2.842496 GGTAAGCTTTGGGGTAGTAGGT 59.158 50.000 3.20 0.00 0.00 3.08
1514 1549 3.118482 GGTAAGCTTTGGGGTAGTAGGTC 60.118 52.174 3.20 0.00 0.00 3.85
1517 1552 2.044630 AGCTTTGGGGTAGTAGGTCTCT 59.955 50.000 0.00 0.00 0.00 3.10
1602 1638 4.784177 TGGAGCAGATGCAATAATCTTGA 58.216 39.130 7.68 0.00 45.16 3.02
1691 1728 2.173669 CAACCTGCGCGTCATAGGG 61.174 63.158 14.54 12.99 35.89 3.53
1713 1750 4.521256 GGAACACAAGTAGACTCTGTCTCT 59.479 45.833 3.30 0.00 42.40 3.10
1745 1784 8.627403 CATATGTTCATATCCCATTAGCCATTC 58.373 37.037 2.74 0.00 0.00 2.67
1777 1816 1.605058 AAGCGGACATGAGCGTAGGT 61.605 55.000 0.00 0.00 46.54 3.08
1795 1834 4.706842 AGGTGTACCAATTCTTGTGTCT 57.293 40.909 3.56 0.00 38.89 3.41
1829 1868 2.927477 TCTTACTGCGGTTATGCTTTCG 59.073 45.455 1.99 0.00 35.36 3.46
1975 2015 7.468141 TGTGATAGTAGATGAGAACAACAGT 57.532 36.000 0.00 0.00 0.00 3.55
2095 2142 6.036470 TGATACTCTCTTCGCAACATAGTTG 58.964 40.000 5.56 5.56 0.00 3.16
2116 2163 8.746922 AGTTGATACATGCAAAACATAACTTG 57.253 30.769 0.00 0.00 36.64 3.16
2117 2164 8.575589 AGTTGATACATGCAAAACATAACTTGA 58.424 29.630 0.00 0.00 36.64 3.02
2118 2165 8.853345 GTTGATACATGCAAAACATAACTTGAG 58.147 33.333 0.00 0.00 36.64 3.02
2119 2166 8.334263 TGATACATGCAAAACATAACTTGAGA 57.666 30.769 0.00 0.00 36.64 3.27
2120 2167 8.959548 TGATACATGCAAAACATAACTTGAGAT 58.040 29.630 0.00 0.00 36.64 2.75
2121 2168 9.793252 GATACATGCAAAACATAACTTGAGATT 57.207 29.630 0.00 0.00 36.64 2.40
2122 2169 7.878477 ACATGCAAAACATAACTTGAGATTG 57.122 32.000 0.00 0.00 36.64 2.67
2123 2170 6.366877 ACATGCAAAACATAACTTGAGATTGC 59.633 34.615 0.00 0.00 36.64 3.56
2124 2171 5.229423 TGCAAAACATAACTTGAGATTGCC 58.771 37.500 0.00 0.00 39.07 4.52
2125 2172 4.627035 GCAAAACATAACTTGAGATTGCCC 59.373 41.667 0.00 0.00 36.56 5.36
2126 2173 5.170748 CAAAACATAACTTGAGATTGCCCC 58.829 41.667 0.00 0.00 0.00 5.80
2127 2174 3.018423 ACATAACTTGAGATTGCCCCC 57.982 47.619 0.00 0.00 0.00 5.40
2149 2196 2.636647 CCCCCAGTGCAAACAAATTT 57.363 45.000 0.00 0.00 0.00 1.82
2150 2197 2.220313 CCCCCAGTGCAAACAAATTTG 58.780 47.619 16.67 16.67 46.81 2.32
2504 2829 1.128692 GACTTTGTATGCTGTCGCCAC 59.871 52.381 0.00 0.00 34.43 5.01
2537 2862 0.961753 CTTTCACTGTTTGCTCCCCC 59.038 55.000 0.00 0.00 0.00 5.40
2818 3150 4.021102 TGGACTCTGGAATGAAGTTTCC 57.979 45.455 0.00 0.00 44.60 3.13
3128 3460 5.982356 AGTAAGATTGCACAGATCAGCTTA 58.018 37.500 0.00 0.00 0.00 3.09
3135 3467 2.617308 GCACAGATCAGCTTATGCATGT 59.383 45.455 10.16 0.00 42.74 3.21
3170 3502 6.449698 ACATTTTTGCATGTCCTCTTACAAG 58.550 36.000 0.00 0.00 31.26 3.16
3267 3599 5.238214 GGAGCAAGCACATTTTAGGATAGAG 59.762 44.000 0.00 0.00 0.00 2.43
3292 3624 4.530946 AGGAGTCTCGATCCCAAAACTTTA 59.469 41.667 0.00 0.00 37.57 1.85
3404 3736 3.403228 AATGGTGGGCAATGATAGGTT 57.597 42.857 0.00 0.00 0.00 3.50
3409 3741 4.215109 GGTGGGCAATGATAGGTTGTATT 58.785 43.478 0.00 0.00 0.00 1.89
3519 3879 7.438160 GCTTTAACTAAGAATGCTGTTTGGTTT 59.562 33.333 0.00 0.00 35.80 3.27
3569 3930 1.064017 TGGAAATCGGCAAGGGCTTAT 60.064 47.619 0.00 0.00 40.87 1.73
3764 4128 2.353704 GCCTGCCTATTTGTTTTGGTCC 60.354 50.000 0.00 0.00 0.00 4.46
3767 4132 4.559153 CTGCCTATTTGTTTTGGTCCTTG 58.441 43.478 0.00 0.00 0.00 3.61
3923 4288 3.057019 TCGTTGGATTCTTCAGTTCACG 58.943 45.455 0.00 0.00 0.00 4.35
3924 4289 2.800544 CGTTGGATTCTTCAGTTCACGT 59.199 45.455 0.00 0.00 0.00 4.49
4006 4372 8.172484 GCAATCGTGTTTATGTACTGATTTACA 58.828 33.333 0.00 0.00 36.41 2.41
4100 4466 1.532505 GCTGATAAGTGCAATGCCGTG 60.533 52.381 1.53 0.00 0.00 4.94
4124 4492 6.605194 TGAACAGCCAATGCAAGGTAATATTA 59.395 34.615 9.94 0.00 41.13 0.98
4159 4527 7.885297 TGTGCTTAGCTATTCAGAAATTTGTT 58.115 30.769 5.60 0.00 0.00 2.83
4171 4539 6.405538 TCAGAAATTTGTTCTTTGCAAGGTT 58.594 32.000 8.56 0.00 0.00 3.50
4172 4540 6.878389 TCAGAAATTTGTTCTTTGCAAGGTTT 59.122 30.769 8.56 0.58 0.00 3.27
4173 4541 7.064490 TCAGAAATTTGTTCTTTGCAAGGTTTC 59.936 33.333 8.56 9.62 35.26 2.78
4174 4542 7.064966 CAGAAATTTGTTCTTTGCAAGGTTTCT 59.935 33.333 13.43 13.43 39.84 2.52
4175 4543 6.667007 AATTTGTTCTTTGCAAGGTTTCTG 57.333 33.333 8.56 0.00 0.00 3.02
4176 4544 5.398603 TTTGTTCTTTGCAAGGTTTCTGA 57.601 34.783 8.56 0.00 0.00 3.27
4177 4545 4.370364 TGTTCTTTGCAAGGTTTCTGAC 57.630 40.909 8.56 0.95 0.00 3.51
4225 4593 7.284261 TCACCAAAATGTGTTCACTGAATAGAA 59.716 33.333 4.59 0.00 37.51 2.10
4226 4594 7.379529 CACCAAAATGTGTTCACTGAATAGAAC 59.620 37.037 4.59 0.00 43.31 3.01
4277 4648 4.199310 CCTTTCGGGCAAGATAATTCTCA 58.801 43.478 0.00 0.00 0.00 3.27
4305 4676 5.310720 AGAAAGATTATGCGGTGAAAACC 57.689 39.130 0.00 0.00 0.00 3.27
4342 4713 3.622163 CAGATAATAGCATGCTAGCTGGC 59.378 47.826 29.78 16.23 46.11 4.85
4355 4726 1.911057 AGCTGGCCTTGGAAGTTTAC 58.089 50.000 3.32 0.00 0.00 2.01
4363 4734 4.350245 GCCTTGGAAGTTTACCCCTTATT 58.650 43.478 0.00 0.00 0.00 1.40
4417 4788 6.959361 TCATTCTTGCTTGTTCAGTTAAGAC 58.041 36.000 0.00 0.00 31.52 3.01
4418 4789 6.767902 TCATTCTTGCTTGTTCAGTTAAGACT 59.232 34.615 0.00 0.00 36.25 3.24
4419 4790 7.283127 TCATTCTTGCTTGTTCAGTTAAGACTT 59.717 33.333 0.00 0.00 32.54 3.01
4420 4791 8.559536 CATTCTTGCTTGTTCAGTTAAGACTTA 58.440 33.333 0.00 0.00 32.54 2.24
4421 4792 8.500753 TTCTTGCTTGTTCAGTTAAGACTTAA 57.499 30.769 3.44 3.44 32.54 1.85
4422 4793 8.142994 TCTTGCTTGTTCAGTTAAGACTTAAG 57.857 34.615 7.93 0.00 32.54 1.85
4423 4794 7.985184 TCTTGCTTGTTCAGTTAAGACTTAAGA 59.015 33.333 10.09 0.82 32.54 2.10
4432 4803 8.645814 TCAGTTAAGACTTAAGAGGTATCACA 57.354 34.615 10.09 0.00 32.54 3.58
4564 4937 6.980978 GCTACAATGATTGCTCAGAGTAAGTA 59.019 38.462 4.84 2.88 34.12 2.24
4678 5051 0.185901 TTGCAGGGTTCAAGGCTTCT 59.814 50.000 0.00 0.00 0.00 2.85
4734 5107 2.680339 GTTGTCTGCTTATGAGGAAGGC 59.320 50.000 0.00 0.00 0.00 4.35
4737 5110 1.137086 TCTGCTTATGAGGAAGGCGAC 59.863 52.381 0.00 0.00 0.00 5.19
4850 5226 7.589587 GCTATCGATTATATGAGAAGATGACCG 59.410 40.741 1.71 0.00 0.00 4.79
4954 5331 1.628846 GGCTTAGGAACTGAACTCCCA 59.371 52.381 0.00 0.00 41.52 4.37
4955 5332 2.239907 GGCTTAGGAACTGAACTCCCAT 59.760 50.000 0.00 0.00 41.52 4.00
4956 5333 3.308473 GGCTTAGGAACTGAACTCCCATT 60.308 47.826 0.00 0.00 41.52 3.16
4957 5334 3.691609 GCTTAGGAACTGAACTCCCATTG 59.308 47.826 0.00 0.00 41.52 2.82
4958 5335 2.206576 AGGAACTGAACTCCCATTGC 57.793 50.000 0.00 0.00 37.18 3.56
4959 5336 0.804989 GGAACTGAACTCCCATTGCG 59.195 55.000 0.00 0.00 0.00 4.85
4960 5337 0.169009 GAACTGAACTCCCATTGCGC 59.831 55.000 0.00 0.00 0.00 6.09
4985 5363 3.435671 GTGCCTAGTTTGTTGTCGCTAAT 59.564 43.478 0.00 0.00 0.00 1.73
4986 5364 4.069304 TGCCTAGTTTGTTGTCGCTAATT 58.931 39.130 0.00 0.00 0.00 1.40
4987 5365 5.121142 GTGCCTAGTTTGTTGTCGCTAATTA 59.879 40.000 0.00 0.00 0.00 1.40
4988 5366 5.701750 TGCCTAGTTTGTTGTCGCTAATTAA 59.298 36.000 0.00 0.00 0.00 1.40
4996 5374 6.417191 TGTTGTCGCTAATTAAGGTTCATC 57.583 37.500 0.00 0.00 0.00 2.92
5146 5525 4.158764 AGTCTTCTCTCCTCCACAATTACG 59.841 45.833 0.00 0.00 0.00 3.18
5233 5614 2.202878 TAAGCGCCGAGGCATCAC 60.203 61.111 15.03 0.34 42.06 3.06
5252 5633 3.452264 TCACAGGCTAGACATGCTATTGT 59.548 43.478 0.00 0.00 0.00 2.71
5268 5649 8.863049 CATGCTATTGTGAATGTTCCTTTTAAC 58.137 33.333 0.00 0.00 0.00 2.01
5281 5662 9.642343 ATGTTCCTTTTAACTAATATTCCTCCC 57.358 33.333 0.00 0.00 0.00 4.30
5282 5663 7.771826 TGTTCCTTTTAACTAATATTCCTCCCG 59.228 37.037 0.00 0.00 0.00 5.14
5283 5664 7.679732 TCCTTTTAACTAATATTCCTCCCGA 57.320 36.000 0.00 0.00 0.00 5.14
5284 5665 7.732996 TCCTTTTAACTAATATTCCTCCCGAG 58.267 38.462 0.00 0.00 0.00 4.63
5285 5666 6.427242 CCTTTTAACTAATATTCCTCCCGAGC 59.573 42.308 0.00 0.00 0.00 5.03
5286 5667 6.742559 TTTAACTAATATTCCTCCCGAGCT 57.257 37.500 0.00 0.00 0.00 4.09
5287 5668 6.742559 TTAACTAATATTCCTCCCGAGCTT 57.257 37.500 0.00 0.00 0.00 3.74
5288 5669 4.608948 ACTAATATTCCTCCCGAGCTTG 57.391 45.455 0.00 0.00 0.00 4.01
5289 5670 3.967987 ACTAATATTCCTCCCGAGCTTGT 59.032 43.478 0.00 0.00 0.00 3.16
5290 5671 3.477210 AATATTCCTCCCGAGCTTGTC 57.523 47.619 0.00 0.00 0.00 3.18
5291 5672 2.160721 TATTCCTCCCGAGCTTGTCT 57.839 50.000 0.00 0.00 0.00 3.41
5292 5673 0.827368 ATTCCTCCCGAGCTTGTCTC 59.173 55.000 0.00 0.00 38.47 3.36
5293 5674 0.251832 TTCCTCCCGAGCTTGTCTCT 60.252 55.000 0.00 0.00 39.70 3.10
5294 5675 0.681564 TCCTCCCGAGCTTGTCTCTC 60.682 60.000 0.00 0.00 39.70 3.20
5295 5676 0.967887 CCTCCCGAGCTTGTCTCTCA 60.968 60.000 0.00 0.00 39.70 3.27
5296 5677 0.891373 CTCCCGAGCTTGTCTCTCAA 59.109 55.000 0.00 0.00 39.70 3.02
5297 5678 1.273606 CTCCCGAGCTTGTCTCTCAAA 59.726 52.381 0.00 0.00 39.70 2.69
5298 5679 1.902508 TCCCGAGCTTGTCTCTCAAAT 59.097 47.619 0.00 0.00 39.70 2.32
5299 5680 2.005451 CCCGAGCTTGTCTCTCAAATG 58.995 52.381 0.00 0.00 39.70 2.32
5300 5681 2.005451 CCGAGCTTGTCTCTCAAATGG 58.995 52.381 0.00 0.00 39.70 3.16
5301 5682 2.354103 CCGAGCTTGTCTCTCAAATGGA 60.354 50.000 0.00 0.00 39.70 3.41
5302 5683 3.529533 CGAGCTTGTCTCTCAAATGGAT 58.470 45.455 0.00 0.00 39.70 3.41
5303 5684 3.309138 CGAGCTTGTCTCTCAAATGGATG 59.691 47.826 0.00 0.00 39.70 3.51
5304 5685 4.260170 GAGCTTGTCTCTCAAATGGATGT 58.740 43.478 0.00 0.00 38.78 3.06
5305 5686 5.423015 GAGCTTGTCTCTCAAATGGATGTA 58.577 41.667 0.00 0.00 38.78 2.29
5306 5687 5.999044 AGCTTGTCTCTCAAATGGATGTAT 58.001 37.500 0.00 0.00 35.48 2.29
5307 5688 6.054295 AGCTTGTCTCTCAAATGGATGTATC 58.946 40.000 0.00 0.00 35.48 2.24
5308 5689 6.054295 GCTTGTCTCTCAAATGGATGTATCT 58.946 40.000 0.00 0.00 35.48 1.98
5309 5690 6.541641 GCTTGTCTCTCAAATGGATGTATCTT 59.458 38.462 0.00 0.00 35.48 2.40
5310 5691 7.466996 GCTTGTCTCTCAAATGGATGTATCTTG 60.467 40.741 0.00 0.00 35.48 3.02
5311 5692 5.819379 TGTCTCTCAAATGGATGTATCTTGC 59.181 40.000 0.00 0.00 0.00 4.01
5312 5693 5.819379 GTCTCTCAAATGGATGTATCTTGCA 59.181 40.000 0.00 0.00 0.00 4.08
5313 5694 5.819379 TCTCTCAAATGGATGTATCTTGCAC 59.181 40.000 0.00 0.00 0.00 4.57
5314 5695 5.748402 TCTCAAATGGATGTATCTTGCACT 58.252 37.500 0.00 0.00 0.00 4.40
5315 5696 6.888105 TCTCAAATGGATGTATCTTGCACTA 58.112 36.000 0.00 0.00 0.00 2.74
5316 5697 6.988580 TCTCAAATGGATGTATCTTGCACTAG 59.011 38.462 0.00 0.00 0.00 2.57
5317 5698 6.888105 TCAAATGGATGTATCTTGCACTAGA 58.112 36.000 0.00 0.00 0.00 2.43
5318 5699 7.512130 TCAAATGGATGTATCTTGCACTAGAT 58.488 34.615 6.18 6.18 38.41 1.98
5319 5700 8.650490 TCAAATGGATGTATCTTGCACTAGATA 58.350 33.333 4.32 4.32 36.34 1.98
5329 5710 7.741027 ATCTTGCACTAGATACATCCATTTG 57.259 36.000 0.00 0.00 33.17 2.32
5330 5711 6.888105 TCTTGCACTAGATACATCCATTTGA 58.112 36.000 0.00 0.00 0.00 2.69
5331 5712 6.988580 TCTTGCACTAGATACATCCATTTGAG 59.011 38.462 0.00 0.00 0.00 3.02
5332 5713 5.614308 TGCACTAGATACATCCATTTGAGG 58.386 41.667 0.00 0.00 0.00 3.86
5333 5714 4.999950 GCACTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
5334 5715 5.221722 GCACTAGATACATCCATTTGAGGGA 60.222 44.000 0.00 0.00 39.14 4.20
5335 5716 6.226787 CACTAGATACATCCATTTGAGGGAC 58.773 44.000 0.00 0.00 37.23 4.46
5336 5717 5.905331 ACTAGATACATCCATTTGAGGGACA 59.095 40.000 0.00 0.00 37.23 4.02
5337 5718 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
5338 5719 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
5339 5720 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
5340 5721 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
5341 5722 2.978156 TCCATTTGAGGGACAAGCTT 57.022 45.000 0.00 0.00 39.77 3.74
5342 5723 3.243359 TCCATTTGAGGGACAAGCTTT 57.757 42.857 0.00 0.00 39.77 3.51
5343 5724 3.575805 TCCATTTGAGGGACAAGCTTTT 58.424 40.909 0.00 0.00 39.77 2.27
5344 5725 3.966665 TCCATTTGAGGGACAAGCTTTTT 59.033 39.130 0.00 0.00 39.77 1.94
5345 5726 4.039124 TCCATTTGAGGGACAAGCTTTTTC 59.961 41.667 0.00 0.00 39.77 2.29
5346 5727 3.708563 TTTGAGGGACAAGCTTTTTCG 57.291 42.857 0.00 0.00 39.77 3.46
5347 5728 2.631160 TGAGGGACAAGCTTTTTCGA 57.369 45.000 0.00 0.00 0.00 3.71
5348 5729 2.925724 TGAGGGACAAGCTTTTTCGAA 58.074 42.857 0.00 0.00 0.00 3.71
5349 5730 2.616842 TGAGGGACAAGCTTTTTCGAAC 59.383 45.455 0.00 0.00 0.00 3.95
5350 5731 1.602377 AGGGACAAGCTTTTTCGAACG 59.398 47.619 0.00 0.00 0.00 3.95
5351 5732 1.334689 GGGACAAGCTTTTTCGAACGG 60.335 52.381 0.00 0.00 0.00 4.44
5352 5733 1.600485 GGACAAGCTTTTTCGAACGGA 59.400 47.619 0.00 0.00 0.00 4.69
5353 5734 2.225727 GGACAAGCTTTTTCGAACGGAT 59.774 45.455 0.00 0.00 0.00 4.18
5354 5735 3.226347 GACAAGCTTTTTCGAACGGATG 58.774 45.455 0.00 0.00 0.00 3.51
5355 5736 2.031157 ACAAGCTTTTTCGAACGGATGG 60.031 45.455 0.00 0.00 0.00 3.51
5356 5737 2.178912 AGCTTTTTCGAACGGATGGA 57.821 45.000 0.00 0.00 0.00 3.41
5357 5738 2.076863 AGCTTTTTCGAACGGATGGAG 58.923 47.619 0.00 0.00 0.00 3.86
5358 5739 1.804748 GCTTTTTCGAACGGATGGAGT 59.195 47.619 0.00 0.00 0.00 3.85
5359 5740 2.997986 GCTTTTTCGAACGGATGGAGTA 59.002 45.455 0.00 0.00 0.00 2.59
5360 5741 3.621715 GCTTTTTCGAACGGATGGAGTAT 59.378 43.478 0.00 0.00 0.00 2.12
5428 5817 5.742546 GCTTCAGCAGTGATCTCAGGATAAT 60.743 44.000 0.00 0.00 41.59 1.28
5470 5859 6.198639 ACTAGTACAAGACCATTCCATCTCT 58.801 40.000 0.00 0.00 0.00 3.10
5488 5877 1.425066 TCTCTTCAATTGTGCCTGGGT 59.575 47.619 5.13 0.00 0.00 4.51
5489 5878 2.158475 TCTCTTCAATTGTGCCTGGGTT 60.158 45.455 5.13 0.00 0.00 4.11
5490 5879 2.629617 CTCTTCAATTGTGCCTGGGTTT 59.370 45.455 5.13 0.00 0.00 3.27
5673 6066 4.260170 GCAGAGAGAACCACAATCAATCT 58.740 43.478 0.00 0.00 0.00 2.40
5674 6067 4.094590 GCAGAGAGAACCACAATCAATCTG 59.905 45.833 0.00 0.00 35.98 2.90
5675 6068 5.485620 CAGAGAGAACCACAATCAATCTGA 58.514 41.667 0.00 0.00 35.41 3.27
5676 6069 5.936372 CAGAGAGAACCACAATCAATCTGAA 59.064 40.000 0.00 0.00 35.41 3.02
5734 6136 6.932356 AAACACATTCTGAATCGCATAGAT 57.068 33.333 0.00 0.00 42.43 1.98
5787 6189 3.608474 CGATCCCCTTGTTTTCGTTGTTC 60.608 47.826 0.00 0.00 0.00 3.18
5820 6222 4.739735 GCACATACACCCTACATCTGTACC 60.740 50.000 0.00 0.00 0.00 3.34
5831 6233 0.676782 ATCTGTACCGCTGGTTTGCC 60.677 55.000 5.57 0.00 37.09 4.52
5839 6241 1.140804 GCTGGTTTGCCGTTGTTGT 59.859 52.632 0.00 0.00 37.67 3.32
5869 6271 5.774690 TCTTATTGGTTTGATTGCCTTGACT 59.225 36.000 0.00 0.00 0.00 3.41
5883 6285 4.202357 TGCCTTGACTGTGTTCTGTTATCT 60.202 41.667 0.00 0.00 0.00 1.98
5884 6286 4.153117 GCCTTGACTGTGTTCTGTTATCTG 59.847 45.833 0.00 0.00 0.00 2.90
5915 6320 3.141398 ACCAGCATGTGTTGAAGTACAG 58.859 45.455 0.00 0.00 0.00 2.74
5923 6328 6.658831 CATGTGTTGAAGTACAGACGAATTT 58.341 36.000 0.00 0.00 0.00 1.82
5932 6337 6.287107 AGTACAGACGAATTTCACAACTTG 57.713 37.500 0.00 0.00 0.00 3.16
5955 6360 6.440436 TGTGATTTGTTGATCAGTGTTGATG 58.560 36.000 0.00 0.00 44.01 3.07
5992 6413 6.663523 TGATATGTCTATCCAAGAAGGCGATA 59.336 38.462 0.00 0.00 35.47 2.92
5993 6414 7.343057 TGATATGTCTATCCAAGAAGGCGATAT 59.657 37.037 0.00 0.00 35.47 1.63
5994 6415 8.768501 ATATGTCTATCCAAGAAGGCGATATA 57.231 34.615 0.00 0.00 35.47 0.86
5995 6416 6.911250 TGTCTATCCAAGAAGGCGATATAA 57.089 37.500 0.00 0.00 35.47 0.98
5996 6417 7.297936 TGTCTATCCAAGAAGGCGATATAAA 57.702 36.000 0.00 0.00 35.47 1.40
5997 6418 7.907389 TGTCTATCCAAGAAGGCGATATAAAT 58.093 34.615 0.00 0.00 35.47 1.40
5998 6419 7.819415 TGTCTATCCAAGAAGGCGATATAAATG 59.181 37.037 0.00 0.00 35.47 2.32
6003 6424 5.221028 CCAAGAAGGCGATATAAATGCACAA 60.221 40.000 0.00 0.00 0.00 3.33
6004 6425 6.441274 CAAGAAGGCGATATAAATGCACAAT 58.559 36.000 0.00 0.00 0.00 2.71
6026 6447 9.801873 ACAATGACAAATCCTTTATTTATTCCG 57.198 29.630 0.00 0.00 35.54 4.30
6029 6450 9.801873 ATGACAAATCCTTTATTTATTCCGTTG 57.198 29.630 0.00 0.00 35.54 4.10
6035 6457 9.635404 AATCCTTTATTTATTCCGTTGGTGATA 57.365 29.630 0.00 0.00 0.00 2.15
6056 6478 4.558226 ACATGTAGCACATCAAGGAAGA 57.442 40.909 0.00 0.00 36.53 2.87
6059 6481 1.661112 GTAGCACATCAAGGAAGACGC 59.339 52.381 0.00 0.00 0.00 5.19
6080 6502 4.677250 CGCGAAGTAGGGAAGACATACTTT 60.677 45.833 0.00 0.00 39.28 2.66
6090 6512 4.223032 GGAAGACATACTTTCCTGGACTGA 59.777 45.833 0.00 0.00 39.13 3.41
6091 6513 5.280011 GGAAGACATACTTTCCTGGACTGAA 60.280 44.000 0.00 0.00 39.13 3.02
6092 6514 5.825593 AGACATACTTTCCTGGACTGAAA 57.174 39.130 0.00 0.00 0.00 2.69
6100 6522 3.208747 TCCTGGACTGAAAGGAAACAC 57.791 47.619 0.00 0.00 39.68 3.32
6101 6523 2.507886 TCCTGGACTGAAAGGAAACACA 59.492 45.455 0.00 0.00 39.68 3.72
6102 6524 2.618709 CCTGGACTGAAAGGAAACACAC 59.381 50.000 0.00 0.00 39.30 3.82
6103 6525 3.278574 CTGGACTGAAAGGAAACACACA 58.721 45.455 0.00 0.00 39.30 3.72
6104 6526 3.013921 TGGACTGAAAGGAAACACACAC 58.986 45.455 0.00 0.00 39.30 3.82
6105 6527 2.357952 GGACTGAAAGGAAACACACACC 59.642 50.000 0.00 0.00 39.30 4.16
6106 6528 3.013921 GACTGAAAGGAAACACACACCA 58.986 45.455 0.00 0.00 39.30 4.17
6107 6529 3.631250 ACTGAAAGGAAACACACACCAT 58.369 40.909 0.00 0.00 39.30 3.55
6108 6530 4.787551 ACTGAAAGGAAACACACACCATA 58.212 39.130 0.00 0.00 39.30 2.74
6109 6531 4.821805 ACTGAAAGGAAACACACACCATAG 59.178 41.667 0.00 0.00 39.30 2.23
6110 6532 4.787551 TGAAAGGAAACACACACCATAGT 58.212 39.130 0.00 0.00 0.00 2.12
6111 6533 5.931294 TGAAAGGAAACACACACCATAGTA 58.069 37.500 0.00 0.00 0.00 1.82
6112 6534 5.995282 TGAAAGGAAACACACACCATAGTAG 59.005 40.000 0.00 0.00 0.00 2.57
6113 6535 5.562298 AAGGAAACACACACCATAGTAGT 57.438 39.130 0.00 0.00 0.00 2.73
6114 6536 4.894784 AGGAAACACACACCATAGTAGTG 58.105 43.478 0.00 0.00 41.15 2.74
6116 6538 5.541101 AGGAAACACACACCATAGTAGTGTA 59.459 40.000 0.00 0.00 46.50 2.90
6117 6539 6.042322 AGGAAACACACACCATAGTAGTGTAA 59.958 38.462 0.00 0.00 46.50 2.41
6118 6540 6.146673 GGAAACACACACCATAGTAGTGTAAC 59.853 42.308 0.00 0.00 46.50 2.50
6136 6558 6.360329 GTGTAACTCAAAGGAAATACACACG 58.640 40.000 8.53 0.00 40.89 4.49
6137 6559 6.201425 GTGTAACTCAAAGGAAATACACACGA 59.799 38.462 8.53 0.00 40.89 4.35
6138 6560 5.668558 AACTCAAAGGAAATACACACGAC 57.331 39.130 0.00 0.00 0.00 4.34
6139 6561 4.699637 ACTCAAAGGAAATACACACGACA 58.300 39.130 0.00 0.00 0.00 4.35
6140 6562 5.120399 ACTCAAAGGAAATACACACGACAA 58.880 37.500 0.00 0.00 0.00 3.18
6141 6563 5.587043 ACTCAAAGGAAATACACACGACAAA 59.413 36.000 0.00 0.00 0.00 2.83
6142 6564 6.055231 TCAAAGGAAATACACACGACAAAG 57.945 37.500 0.00 0.00 0.00 2.77
6143 6565 5.818336 TCAAAGGAAATACACACGACAAAGA 59.182 36.000 0.00 0.00 0.00 2.52
6144 6566 6.485313 TCAAAGGAAATACACACGACAAAGAT 59.515 34.615 0.00 0.00 0.00 2.40
6145 6567 5.862924 AGGAAATACACACGACAAAGATG 57.137 39.130 0.00 0.00 0.00 2.90
6146 6568 4.695455 AGGAAATACACACGACAAAGATGG 59.305 41.667 0.00 0.00 0.00 3.51
6147 6569 4.454504 GGAAATACACACGACAAAGATGGT 59.545 41.667 0.00 0.00 0.00 3.55
6148 6570 5.640357 GGAAATACACACGACAAAGATGGTA 59.360 40.000 0.00 0.00 0.00 3.25
6149 6571 6.183360 GGAAATACACACGACAAAGATGGTAG 60.183 42.308 0.00 0.00 0.00 3.18
6150 6572 3.746045 ACACACGACAAAGATGGTAGT 57.254 42.857 0.00 0.00 0.00 2.73
6151 6573 4.067972 ACACACGACAAAGATGGTAGTT 57.932 40.909 0.00 0.00 0.00 2.24
6180 6602 7.974501 AGGAAATACACACGACAAAGATAGTAG 59.025 37.037 0.00 0.00 0.00 2.57
6181 6603 7.758528 GGAAATACACACGACAAAGATAGTAGT 59.241 37.037 0.00 0.00 0.00 2.73
6183 6605 8.462143 AATACACACGACAAAGATAGTAGTTG 57.538 34.615 0.00 0.00 0.00 3.16
6227 6653 0.811281 GGTGATTTTCTTCTGGCCGG 59.189 55.000 4.71 4.71 0.00 6.13
6228 6654 1.534729 GTGATTTTCTTCTGGCCGGT 58.465 50.000 12.43 0.00 0.00 5.28
6229 6655 2.617021 GGTGATTTTCTTCTGGCCGGTA 60.617 50.000 12.43 0.00 0.00 4.02
6230 6656 2.418976 GTGATTTTCTTCTGGCCGGTAC 59.581 50.000 12.43 0.00 0.00 3.34
6231 6657 2.304761 TGATTTTCTTCTGGCCGGTACT 59.695 45.455 12.43 0.00 0.00 2.73
6232 6658 2.467566 TTTTCTTCTGGCCGGTACTC 57.532 50.000 12.43 0.00 0.00 2.59
6233 6659 0.611714 TTTCTTCTGGCCGGTACTCC 59.388 55.000 12.43 0.00 0.00 3.85
6234 6660 1.262640 TTCTTCTGGCCGGTACTCCC 61.263 60.000 12.43 0.00 0.00 4.30
6235 6661 1.686110 CTTCTGGCCGGTACTCCCT 60.686 63.158 12.43 0.00 0.00 4.20
6236 6662 1.677637 CTTCTGGCCGGTACTCCCTC 61.678 65.000 12.43 0.00 0.00 4.30
6237 6663 3.155167 CTGGCCGGTACTCCCTCC 61.155 72.222 2.29 0.00 0.00 4.30
6240 6666 3.073101 GCCGGTACTCCCTCCGTT 61.073 66.667 1.90 0.00 44.51 4.44
6241 6667 2.653087 GCCGGTACTCCCTCCGTTT 61.653 63.158 1.90 0.00 44.51 3.60
6242 6668 1.977685 CCGGTACTCCCTCCGTTTT 59.022 57.895 0.00 0.00 44.51 2.43
6243 6669 0.322648 CCGGTACTCCCTCCGTTTTT 59.677 55.000 0.00 0.00 44.51 1.94
6244 6670 1.550072 CCGGTACTCCCTCCGTTTTTA 59.450 52.381 0.00 0.00 44.51 1.52
6245 6671 2.169144 CCGGTACTCCCTCCGTTTTTAT 59.831 50.000 0.00 0.00 44.51 1.40
6246 6672 3.369787 CCGGTACTCCCTCCGTTTTTATT 60.370 47.826 0.00 0.00 44.51 1.40
6247 6673 4.256110 CGGTACTCCCTCCGTTTTTATTT 58.744 43.478 0.00 0.00 41.58 1.40
6248 6674 5.418676 CGGTACTCCCTCCGTTTTTATTTA 58.581 41.667 0.00 0.00 41.58 1.40
6249 6675 5.291858 CGGTACTCCCTCCGTTTTTATTTAC 59.708 44.000 0.00 0.00 41.58 2.01
6250 6676 6.409704 GGTACTCCCTCCGTTTTTATTTACT 58.590 40.000 0.00 0.00 0.00 2.24
6251 6677 6.536582 GGTACTCCCTCCGTTTTTATTTACTC 59.463 42.308 0.00 0.00 0.00 2.59
6252 6678 6.370186 ACTCCCTCCGTTTTTATTTACTCT 57.630 37.500 0.00 0.00 0.00 3.24
6253 6679 6.171213 ACTCCCTCCGTTTTTATTTACTCTG 58.829 40.000 0.00 0.00 0.00 3.35
6254 6680 4.939439 TCCCTCCGTTTTTATTTACTCTGC 59.061 41.667 0.00 0.00 0.00 4.26
6255 6681 4.698304 CCCTCCGTTTTTATTTACTCTGCA 59.302 41.667 0.00 0.00 0.00 4.41
6256 6682 5.357032 CCCTCCGTTTTTATTTACTCTGCAT 59.643 40.000 0.00 0.00 0.00 3.96
6257 6683 6.258160 CCTCCGTTTTTATTTACTCTGCATG 58.742 40.000 0.00 0.00 0.00 4.06
6258 6684 5.636837 TCCGTTTTTATTTACTCTGCATGC 58.363 37.500 11.82 11.82 0.00 4.06
6259 6685 5.182190 TCCGTTTTTATTTACTCTGCATGCA 59.818 36.000 21.29 21.29 0.00 3.96
6260 6686 6.035843 CCGTTTTTATTTACTCTGCATGCAT 58.964 36.000 22.97 9.42 0.00 3.96
6261 6687 7.066404 TCCGTTTTTATTTACTCTGCATGCATA 59.934 33.333 22.97 13.76 0.00 3.14
6262 6688 7.862372 CCGTTTTTATTTACTCTGCATGCATAT 59.138 33.333 22.97 12.10 0.00 1.78
6263 6689 9.236691 CGTTTTTATTTACTCTGCATGCATATT 57.763 29.630 22.97 11.08 0.00 1.28
6269 6695 8.915057 ATTTACTCTGCATGCATATTAGAGTT 57.085 30.769 31.97 18.82 43.98 3.01
6270 6696 7.719778 TTACTCTGCATGCATATTAGAGTTG 57.280 36.000 31.97 15.09 43.98 3.16
6271 6697 5.922053 ACTCTGCATGCATATTAGAGTTGA 58.078 37.500 25.61 13.99 43.98 3.18
6272 6698 5.757320 ACTCTGCATGCATATTAGAGTTGAC 59.243 40.000 25.61 1.60 43.98 3.18
6273 6699 5.922053 TCTGCATGCATATTAGAGTTGACT 58.078 37.500 22.97 0.00 0.00 3.41
6274 6700 5.756833 TCTGCATGCATATTAGAGTTGACTG 59.243 40.000 22.97 3.33 0.00 3.51
6275 6701 5.673514 TGCATGCATATTAGAGTTGACTGA 58.326 37.500 18.46 0.00 0.00 3.41
6276 6702 6.114767 TGCATGCATATTAGAGTTGACTGAA 58.885 36.000 18.46 0.00 0.00 3.02
6277 6703 6.259387 TGCATGCATATTAGAGTTGACTGAAG 59.741 38.462 18.46 0.00 0.00 3.02
6278 6704 6.259608 GCATGCATATTAGAGTTGACTGAAGT 59.740 38.462 14.21 0.00 0.00 3.01
6279 6705 7.518052 GCATGCATATTAGAGTTGACTGAAGTC 60.518 40.741 14.21 3.41 44.97 3.01
6458 6884 6.330278 AAGTTTGTAAAGCTTGACTTTGACC 58.670 36.000 15.19 0.00 45.94 4.02
6459 6885 6.071616 AAGTTTGTAAAGCTTGACTTTGACCA 60.072 34.615 15.19 0.00 45.94 4.02
6460 6886 7.524698 AAGTTTGTAAAGCTTGACTTTGACCAA 60.525 33.333 15.19 0.00 45.94 3.67
6464 6890 5.405935 AAAGCTTGACTTTGACCAAAACT 57.594 34.783 0.00 0.00 47.00 2.66
6465 6891 6.524101 AAAGCTTGACTTTGACCAAAACTA 57.476 33.333 0.00 0.00 47.00 2.24
6466 6892 6.524101 AAGCTTGACTTTGACCAAAACTAA 57.476 33.333 0.00 0.00 33.71 2.24
6467 6893 6.715347 AGCTTGACTTTGACCAAAACTAAT 57.285 33.333 0.00 0.00 0.00 1.73
6468 6894 7.817418 AGCTTGACTTTGACCAAAACTAATA 57.183 32.000 0.00 0.00 0.00 0.98
6469 6895 8.409358 AGCTTGACTTTGACCAAAACTAATAT 57.591 30.769 0.00 0.00 0.00 1.28
6470 6896 8.299570 AGCTTGACTTTGACCAAAACTAATATG 58.700 33.333 0.00 0.00 0.00 1.78
6471 6897 7.062255 GCTTGACTTTGACCAAAACTAATATGC 59.938 37.037 0.00 0.00 0.00 3.14
6472 6898 6.607689 TGACTTTGACCAAAACTAATATGCG 58.392 36.000 0.00 0.00 0.00 4.73
6473 6899 6.428465 TGACTTTGACCAAAACTAATATGCGA 59.572 34.615 0.00 0.00 0.00 5.10
6474 6900 7.041030 TGACTTTGACCAAAACTAATATGCGAA 60.041 33.333 0.00 0.00 0.00 4.70
6475 6901 7.081976 ACTTTGACCAAAACTAATATGCGAAC 58.918 34.615 0.00 0.00 0.00 3.95
6476 6902 6.811253 TTGACCAAAACTAATATGCGAACT 57.189 33.333 0.00 0.00 0.00 3.01
6477 6903 7.908827 TTGACCAAAACTAATATGCGAACTA 57.091 32.000 0.00 0.00 0.00 2.24
6478 6904 7.908827 TGACCAAAACTAATATGCGAACTAA 57.091 32.000 0.00 0.00 0.00 2.24
6479 6905 8.325421 TGACCAAAACTAATATGCGAACTAAA 57.675 30.769 0.00 0.00 0.00 1.85
6480 6906 8.952278 TGACCAAAACTAATATGCGAACTAAAT 58.048 29.630 0.00 0.00 0.00 1.40
6488 6914 9.925268 ACTAATATGCGAACTAAATAAAAACGG 57.075 29.630 0.00 0.00 0.00 4.44
6491 6917 5.285798 TGCGAACTAAATAAAAACGGAGG 57.714 39.130 0.00 0.00 0.00 4.30
6492 6918 4.154556 TGCGAACTAAATAAAAACGGAGGG 59.845 41.667 0.00 0.00 0.00 4.30
6493 6919 4.392754 GCGAACTAAATAAAAACGGAGGGA 59.607 41.667 0.00 0.00 0.00 4.20
6504 6930 1.028868 ACGGAGGGAGTACGTGCTAC 61.029 60.000 7.44 7.44 39.64 3.58
6544 6970 4.576463 CCACAACTAGTTGAGCTTCAGTTT 59.424 41.667 36.14 11.73 42.93 2.66
6593 7019 4.226846 AGATGATCATGGAGACTTGTTGGT 59.773 41.667 14.30 0.00 36.87 3.67
6603 7029 3.299503 AGACTTGTTGGTGCTGGATTTT 58.700 40.909 0.00 0.00 0.00 1.82
6613 7039 0.727398 GCTGGATTTTCGAACGGGAG 59.273 55.000 0.00 0.00 0.00 4.30
6616 7042 0.251073 GGATTTTCGAACGGGAGGGA 59.749 55.000 0.00 0.00 0.00 4.20
6617 7043 1.366679 GATTTTCGAACGGGAGGGAC 58.633 55.000 0.00 0.00 0.00 4.46
6618 7044 0.035725 ATTTTCGAACGGGAGGGACC 60.036 55.000 0.00 0.00 38.08 4.46
6629 7055 0.621862 GGAGGGACCCAGGAATCAGT 60.622 60.000 14.60 0.00 0.00 3.41
6630 7056 1.344087 GGAGGGACCCAGGAATCAGTA 60.344 57.143 14.60 0.00 0.00 2.74
6631 7057 1.763545 GAGGGACCCAGGAATCAGTAC 59.236 57.143 14.60 0.00 0.00 2.73
6640 7094 2.170607 CAGGAATCAGTACCCCGACAAT 59.829 50.000 0.00 0.00 0.00 2.71
6651 7105 3.124921 CGACAATCGGTGGTGCCC 61.125 66.667 0.00 0.00 36.00 5.36
6653 7107 3.256960 ACAATCGGTGGTGCCCCT 61.257 61.111 0.00 0.00 0.00 4.79
6654 7108 2.751436 CAATCGGTGGTGCCCCTG 60.751 66.667 0.00 0.00 0.00 4.45
6655 7109 4.047125 AATCGGTGGTGCCCCTGG 62.047 66.667 0.00 0.00 0.00 4.45
6719 7173 4.477975 CCGTCGAGAGCCGGTGAC 62.478 72.222 1.90 3.14 39.38 3.67
6720 7174 4.477975 CGTCGAGAGCCGGTGACC 62.478 72.222 1.90 0.00 39.14 4.02
6721 7175 4.131088 GTCGAGAGCCGGTGACCC 62.131 72.222 1.90 0.00 39.14 4.46
6861 7315 1.062525 CGCTTCGCCATTGCTAACC 59.937 57.895 0.00 0.00 34.43 2.85
6884 7338 8.030913 ACCGGGAGTTCTTATAAAATCACTAT 57.969 34.615 6.32 0.00 0.00 2.12
6885 7339 9.151177 ACCGGGAGTTCTTATAAAATCACTATA 57.849 33.333 6.32 0.00 0.00 1.31
6886 7340 9.640963 CCGGGAGTTCTTATAAAATCACTATAG 57.359 37.037 0.00 0.00 0.00 1.31
6906 7360 8.272889 ACTATAGTACTCAGGAGATGTTGTGTA 58.727 37.037 2.75 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
113 116 3.817084 CTGAAGAAATCACTTGTGCTGGA 59.183 43.478 0.00 0.00 33.47 3.86
350 353 1.915614 CTGCTGCACGAACATGGTCC 61.916 60.000 4.85 0.00 0.00 4.46
411 414 1.934220 GAGCACCGTCTCGATGGACA 61.934 60.000 11.96 0.00 39.90 4.02
598 601 0.388134 ACGTACTGCAACAGTAGCCG 60.388 55.000 7.67 10.90 45.88 5.52
607 610 2.028567 TGTCCATCATGACGTACTGCAA 60.029 45.455 0.00 0.00 38.11 4.08
836 839 8.225416 AGAAAGAGTAAAGTATTGTTTTCCCCT 58.775 33.333 0.00 0.00 0.00 4.79
846 849 8.779354 CTGGTAAGCAGAAAGAGTAAAGTATT 57.221 34.615 0.00 0.00 0.00 1.89
922 942 1.595929 GGTGTCGAACCGCTGGAAA 60.596 57.895 1.50 0.00 39.81 3.13
940 960 2.258591 CTGTGACAGACCGGACGG 59.741 66.667 9.46 9.56 42.03 4.79
1127 1153 4.247380 GGCCATGGCGGAGAGAGG 62.247 72.222 29.90 0.00 43.06 3.69
1156 1182 1.144936 CATGAGCTTCTCCGGGTCC 59.855 63.158 0.00 0.00 0.00 4.46
1236 1263 0.323725 CAAGGGGGAATCCAGGTGTG 60.324 60.000 0.09 0.00 37.22 3.82
1290 1317 6.460781 TCTAATTCGACTAGTTTGCCTTCAA 58.539 36.000 0.00 0.00 0.00 2.69
1291 1318 6.032956 TCTAATTCGACTAGTTTGCCTTCA 57.967 37.500 0.00 0.00 0.00 3.02
1294 1321 5.046520 AGGTTCTAATTCGACTAGTTTGCCT 60.047 40.000 0.00 0.00 0.00 4.75
1317 1344 2.256174 TGAAGAAACGCGAACCGATAG 58.744 47.619 15.93 0.00 41.02 2.08
1318 1345 2.256174 CTGAAGAAACGCGAACCGATA 58.744 47.619 15.93 0.00 41.02 2.92
1319 1346 1.068474 CTGAAGAAACGCGAACCGAT 58.932 50.000 15.93 0.00 41.02 4.18
1320 1347 0.249155 ACTGAAGAAACGCGAACCGA 60.249 50.000 15.93 0.00 41.02 4.69
1321 1348 1.385743 CTACTGAAGAAACGCGAACCG 59.614 52.381 15.93 0.00 44.21 4.44
1322 1349 2.662156 CTCTACTGAAGAAACGCGAACC 59.338 50.000 15.93 0.00 32.46 3.62
1323 1350 3.306818 ACTCTACTGAAGAAACGCGAAC 58.693 45.455 15.93 3.14 32.46 3.95
1326 1353 4.710528 AAAACTCTACTGAAGAAACGCG 57.289 40.909 3.53 3.53 32.46 6.01
1328 1355 7.851472 GGAAAGAAAAACTCTACTGAAGAAACG 59.149 37.037 0.00 0.00 32.46 3.60
1356 1384 1.202734 AGGACGCTCCAATCCATGATG 60.203 52.381 0.00 0.00 39.61 3.07
1390 1418 1.142097 GCTCCGCCTCACCTAAGAC 59.858 63.158 0.00 0.00 0.00 3.01
1423 1451 5.391950 GCGCCACAGATTTTTCATAGAAAGA 60.392 40.000 0.00 0.00 0.00 2.52
1424 1452 4.795278 GCGCCACAGATTTTTCATAGAAAG 59.205 41.667 0.00 0.00 0.00 2.62
1426 1454 4.009675 AGCGCCACAGATTTTTCATAGAA 58.990 39.130 2.29 0.00 0.00 2.10
1427 1455 3.374988 CAGCGCCACAGATTTTTCATAGA 59.625 43.478 2.29 0.00 0.00 1.98
1428 1456 3.127548 ACAGCGCCACAGATTTTTCATAG 59.872 43.478 2.29 0.00 0.00 2.23
1429 1457 3.081061 ACAGCGCCACAGATTTTTCATA 58.919 40.909 2.29 0.00 0.00 2.15
1432 1460 2.422276 AACAGCGCCACAGATTTTTC 57.578 45.000 2.29 0.00 0.00 2.29
1433 1461 2.888834 AAACAGCGCCACAGATTTTT 57.111 40.000 2.29 0.00 0.00 1.94
1435 1463 2.888834 AAAAACAGCGCCACAGATTT 57.111 40.000 2.29 0.00 0.00 2.17
1436 1464 2.228822 CCTAAAAACAGCGCCACAGATT 59.771 45.455 2.29 0.00 0.00 2.40
1437 1465 1.812571 CCTAAAAACAGCGCCACAGAT 59.187 47.619 2.29 0.00 0.00 2.90
1438 1466 1.202710 TCCTAAAAACAGCGCCACAGA 60.203 47.619 2.29 0.00 0.00 3.41
1439 1467 1.234821 TCCTAAAAACAGCGCCACAG 58.765 50.000 2.29 0.00 0.00 3.66
1481 1509 1.498176 AAGCTTACCTCCACCCCACC 61.498 60.000 0.00 0.00 0.00 4.61
1482 1510 0.404426 AAAGCTTACCTCCACCCCAC 59.596 55.000 0.00 0.00 0.00 4.61
1483 1511 0.404040 CAAAGCTTACCTCCACCCCA 59.596 55.000 0.00 0.00 0.00 4.96
1484 1512 0.323451 CCAAAGCTTACCTCCACCCC 60.323 60.000 0.00 0.00 0.00 4.95
1485 1513 0.323451 CCCAAAGCTTACCTCCACCC 60.323 60.000 0.00 0.00 0.00 4.61
1513 1548 4.272489 CATTTGGGGCAAGTAATCAGAGA 58.728 43.478 0.00 0.00 0.00 3.10
1514 1549 3.181483 GCATTTGGGGCAAGTAATCAGAG 60.181 47.826 0.00 0.00 0.00 3.35
1517 1552 2.818921 AGCATTTGGGGCAAGTAATCA 58.181 42.857 0.00 0.00 0.00 2.57
1619 1655 2.747822 CGTGCAGCCTGCTCACATC 61.748 63.158 18.96 1.04 45.31 3.06
1691 1728 5.472137 AGAGAGACAGAGTCTACTTGTGTTC 59.528 44.000 0.00 0.00 43.53 3.18
1745 1784 2.252260 CGCTTCCGCTGGTGTTTG 59.748 61.111 0.00 0.00 0.00 2.93
1762 1801 1.202382 GGTACACCTACGCTCATGTCC 60.202 57.143 0.00 0.00 0.00 4.02
1764 1803 1.552578 TGGTACACCTACGCTCATGT 58.447 50.000 0.00 0.00 36.82 3.21
1795 1834 2.872245 GCAGTAAGAAGCAACACAGACA 59.128 45.455 0.00 0.00 0.00 3.41
1829 1868 2.332654 CCCAACAAGCTACACCGCC 61.333 63.158 0.00 0.00 0.00 6.13
2039 2080 1.143305 CTGGTGAGCGTTTGAGACTG 58.857 55.000 0.00 0.00 0.00 3.51
2095 2142 9.793252 AATCTCAAGTTATGTTTTGCATGTATC 57.207 29.630 0.00 0.00 38.47 2.24
2130 2177 2.220313 CAAATTTGTTTGCACTGGGGG 58.780 47.619 10.15 0.00 0.00 5.40
2139 2186 9.332301 CCATTAAGCATTAAGCAAATTTGTTTG 57.668 29.630 25.16 13.77 44.82 2.93
2140 2187 9.065798 ACCATTAAGCATTAAGCAAATTTGTTT 57.934 25.926 21.62 21.62 44.82 2.83
2141 2188 8.620116 ACCATTAAGCATTAAGCAAATTTGTT 57.380 26.923 19.03 10.93 44.82 2.83
2142 2189 9.717942 TTACCATTAAGCATTAAGCAAATTTGT 57.282 25.926 19.03 3.40 44.82 2.83
2146 2193 9.328845 CCAATTACCATTAAGCATTAAGCAAAT 57.671 29.630 0.00 0.00 44.82 2.32
2147 2194 8.535335 TCCAATTACCATTAAGCATTAAGCAAA 58.465 29.630 0.00 0.00 44.82 3.68
2148 2195 8.072321 TCCAATTACCATTAAGCATTAAGCAA 57.928 30.769 0.00 0.00 44.82 3.91
2149 2196 7.652524 TCCAATTACCATTAAGCATTAAGCA 57.347 32.000 0.00 0.00 44.82 3.91
2150 2197 9.546428 AATTCCAATTACCATTAAGCATTAAGC 57.454 29.630 0.00 0.00 44.82 3.09
2402 2727 4.037858 AGCTCAGTTTTGTTCTGCAAAG 57.962 40.909 0.00 0.00 46.40 2.77
2504 2829 9.694520 CAAACAGTGAAAGAGAATATACGAATG 57.305 33.333 0.00 0.00 0.00 2.67
2537 2862 5.262422 TGAAATTTCATTACATACAGCGCG 58.738 37.500 16.91 0.00 31.01 6.86
2818 3150 2.860136 TGATGCTCTGCGATAAAAGTCG 59.140 45.455 0.00 0.00 44.14 4.18
3135 3467 9.632807 GGACATGCAAAAATGTAGTGTAATTAA 57.367 29.630 0.00 0.00 40.87 1.40
3170 3502 1.402968 GACACATGACATGCCATGGAC 59.597 52.381 23.61 11.80 46.06 4.02
3267 3599 3.055747 AGTTTTGGGATCGAGACTCCTTC 60.056 47.826 3.65 0.00 33.05 3.46
3292 3624 2.031495 ACTCCCCTAGTGTTGCTCTT 57.969 50.000 0.00 0.00 36.93 2.85
3404 3736 7.527568 AGGAACCGAAATTGGTAAAAATACA 57.472 32.000 0.00 0.00 42.89 2.29
3409 3741 6.063404 ACTGTAGGAACCGAAATTGGTAAAA 58.937 36.000 0.00 0.00 42.89 1.52
3519 3879 6.179756 TCTGCCTGCTTCTTTATGTTTGATA 58.820 36.000 0.00 0.00 0.00 2.15
3590 3952 7.070198 TCGTGGAATATAGGATCAACCAGTTTA 59.930 37.037 0.00 0.00 42.04 2.01
3764 4128 2.552743 GTTCGGGGAAGGAGAAAACAAG 59.447 50.000 0.00 0.00 0.00 3.16
3767 4132 2.265589 TGTTCGGGGAAGGAGAAAAC 57.734 50.000 0.00 0.00 0.00 2.43
3923 4288 6.183360 TGTCAGAAAAAGATCAAGGACAACAC 60.183 38.462 0.00 0.00 0.00 3.32
3924 4289 5.885352 TGTCAGAAAAAGATCAAGGACAACA 59.115 36.000 0.00 0.00 0.00 3.33
4006 4372 5.461327 AGATGGCCAAATAAGGAATGACAT 58.539 37.500 10.96 0.00 0.00 3.06
4016 4382 3.266772 ACCTGTCAGAGATGGCCAAATAA 59.733 43.478 10.96 0.00 0.00 1.40
4100 4466 3.874392 ATTACCTTGCATTGGCTGTTC 57.126 42.857 6.21 0.00 41.91 3.18
4124 4492 5.982890 ATAGCTAAGCACATTTTGGTGTT 57.017 34.783 0.00 0.00 40.89 3.32
4171 4539 3.318313 AGGTTTCCCTCAGAAGTCAGAA 58.682 45.455 0.00 0.00 35.62 3.02
4172 4540 2.977808 AGGTTTCCCTCAGAAGTCAGA 58.022 47.619 0.00 0.00 35.62 3.27
4173 4541 3.406764 CAAGGTTTCCCTCAGAAGTCAG 58.593 50.000 0.00 0.00 41.56 3.51
4174 4542 2.106511 CCAAGGTTTCCCTCAGAAGTCA 59.893 50.000 0.00 0.00 41.56 3.41
4175 4543 2.106684 ACCAAGGTTTCCCTCAGAAGTC 59.893 50.000 0.00 0.00 41.56 3.01
4176 4544 2.136026 ACCAAGGTTTCCCTCAGAAGT 58.864 47.619 0.00 0.00 41.56 3.01
4177 4545 2.959465 ACCAAGGTTTCCCTCAGAAG 57.041 50.000 0.00 0.00 41.56 2.85
4215 4583 9.490379 AGTTTCAGAATTTACGTTCTATTCAGT 57.510 29.630 15.06 1.02 36.33 3.41
4255 4623 4.035675 GTGAGAATTATCTTGCCCGAAAGG 59.964 45.833 1.19 0.00 43.96 3.11
4277 4648 2.205074 CCGCATAATCTTTCTCGCTGT 58.795 47.619 0.00 0.00 0.00 4.40
4305 4676 9.302345 TGCTATTATCTGTTAAGAAACTTCTCG 57.698 33.333 0.00 0.00 36.28 4.04
4342 4713 7.452189 TGTTTAATAAGGGGTAAACTTCCAAGG 59.548 37.037 7.56 0.00 39.74 3.61
4355 4726 9.829507 TTTTGCATATGAATGTTTAATAAGGGG 57.170 29.630 6.97 0.00 35.38 4.79
4444 4816 5.240121 GGAACAACTCCGGATTAACACTTA 58.760 41.667 3.57 0.00 33.37 2.24
4564 4937 4.640771 ACCAGTCTATCACCAACACATT 57.359 40.909 0.00 0.00 0.00 2.71
4678 5051 5.812127 CACATCGATTCTGGTCACTATTCAA 59.188 40.000 0.00 0.00 0.00 2.69
4734 5107 1.525784 CGCTTGATTTCTTCAGCGTCG 60.526 52.381 4.28 0.00 42.17 5.12
4805 5178 8.142551 TCGATAGCCTTTTAACTAAGGATCTTC 58.857 37.037 9.70 4.31 46.28 2.87
4850 5226 3.208594 TCTAAGCACATGCACCATCATC 58.791 45.455 6.64 0.00 45.16 2.92
4954 5331 0.609131 AAACTAGGCACCTGCGCAAT 60.609 50.000 13.05 0.00 43.26 3.56
4955 5332 1.228124 AAACTAGGCACCTGCGCAA 60.228 52.632 13.05 0.00 43.26 4.85
4956 5333 1.965930 CAAACTAGGCACCTGCGCA 60.966 57.895 10.98 10.98 43.26 6.09
4957 5334 1.515521 AACAAACTAGGCACCTGCGC 61.516 55.000 0.00 0.00 43.26 6.09
4958 5335 0.238289 CAACAAACTAGGCACCTGCG 59.762 55.000 0.00 0.00 43.26 5.18
4959 5336 1.266989 GACAACAAACTAGGCACCTGC 59.733 52.381 0.00 0.00 41.14 4.85
4960 5337 1.531149 CGACAACAAACTAGGCACCTG 59.469 52.381 0.00 0.00 0.00 4.00
4985 5363 7.837689 TCCTACAGCTAACTAGATGAACCTTAA 59.162 37.037 8.90 0.00 41.99 1.85
4986 5364 7.351952 TCCTACAGCTAACTAGATGAACCTTA 58.648 38.462 8.90 0.00 41.99 2.69
4987 5365 6.195700 TCCTACAGCTAACTAGATGAACCTT 58.804 40.000 8.90 0.00 41.99 3.50
4988 5366 5.767670 TCCTACAGCTAACTAGATGAACCT 58.232 41.667 8.90 0.00 41.99 3.50
4996 5374 7.087639 GCACATAAGATCCTACAGCTAACTAG 58.912 42.308 0.00 0.00 0.00 2.57
5146 5525 2.064014 GCAAAAAGCAGATGAGGCAAC 58.936 47.619 0.00 0.00 44.79 4.17
5207 5586 3.458163 CGGCGCTTAGTCCCCTCA 61.458 66.667 7.64 0.00 0.00 3.86
5233 5614 4.063998 TCACAATAGCATGTCTAGCCTG 57.936 45.455 0.00 0.00 0.00 4.85
5268 5649 4.282195 AGACAAGCTCGGGAGGAATATTAG 59.718 45.833 0.00 0.00 0.00 1.73
5275 5656 4.019983 GAGACAAGCTCGGGAGGA 57.980 61.111 0.00 0.00 33.17 3.71
5282 5663 4.260170 ACATCCATTTGAGAGACAAGCTC 58.740 43.478 0.00 0.00 44.29 4.09
5283 5664 4.298103 ACATCCATTTGAGAGACAAGCT 57.702 40.909 0.00 0.00 39.77 3.74
5284 5665 6.054295 AGATACATCCATTTGAGAGACAAGC 58.946 40.000 0.00 0.00 39.77 4.01
5285 5666 7.466996 GCAAGATACATCCATTTGAGAGACAAG 60.467 40.741 0.00 0.00 39.77 3.16
5286 5667 6.317140 GCAAGATACATCCATTTGAGAGACAA 59.683 38.462 0.00 0.00 36.65 3.18
5287 5668 5.819379 GCAAGATACATCCATTTGAGAGACA 59.181 40.000 0.00 0.00 0.00 3.41
5288 5669 5.819379 TGCAAGATACATCCATTTGAGAGAC 59.181 40.000 0.00 0.00 0.00 3.36
5289 5670 5.819379 GTGCAAGATACATCCATTTGAGAGA 59.181 40.000 0.00 0.00 0.00 3.10
5290 5671 5.821470 AGTGCAAGATACATCCATTTGAGAG 59.179 40.000 0.00 0.00 0.00 3.20
5291 5672 5.748402 AGTGCAAGATACATCCATTTGAGA 58.252 37.500 0.00 0.00 0.00 3.27
5292 5673 6.988580 TCTAGTGCAAGATACATCCATTTGAG 59.011 38.462 0.00 0.00 0.00 3.02
5293 5674 6.888105 TCTAGTGCAAGATACATCCATTTGA 58.112 36.000 0.00 0.00 0.00 2.69
5294 5675 7.741027 ATCTAGTGCAAGATACATCCATTTG 57.259 36.000 0.00 0.00 34.40 2.32
5304 5685 8.650490 TCAAATGGATGTATCTAGTGCAAGATA 58.350 33.333 4.32 4.32 37.41 1.98
5305 5686 7.512130 TCAAATGGATGTATCTAGTGCAAGAT 58.488 34.615 6.18 6.18 39.54 2.40
5306 5687 6.888105 TCAAATGGATGTATCTAGTGCAAGA 58.112 36.000 0.00 0.00 0.00 3.02
5307 5688 6.204301 CCTCAAATGGATGTATCTAGTGCAAG 59.796 42.308 0.00 0.00 0.00 4.01
5308 5689 6.057533 CCTCAAATGGATGTATCTAGTGCAA 58.942 40.000 0.00 0.00 0.00 4.08
5309 5690 5.455183 CCCTCAAATGGATGTATCTAGTGCA 60.455 44.000 0.00 0.00 0.00 4.57
5310 5691 4.999950 CCCTCAAATGGATGTATCTAGTGC 59.000 45.833 0.00 0.00 0.00 4.40
5311 5692 6.183361 TGTCCCTCAAATGGATGTATCTAGTG 60.183 42.308 0.00 0.00 33.65 2.74
5312 5693 5.905331 TGTCCCTCAAATGGATGTATCTAGT 59.095 40.000 0.00 0.00 33.65 2.57
5313 5694 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
5314 5695 6.688922 GCTTGTCCCTCAAATGGATGTATCTA 60.689 42.308 0.00 0.00 35.48 1.98
5315 5696 5.688807 CTTGTCCCTCAAATGGATGTATCT 58.311 41.667 0.00 0.00 35.48 1.98
5316 5697 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
5317 5698 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
5318 5699 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
5319 5700 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
5320 5701 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
5321 5702 3.463048 AAGCTTGTCCCTCAAATGGAT 57.537 42.857 0.00 0.00 35.48 3.41
5322 5703 2.978156 AAGCTTGTCCCTCAAATGGA 57.022 45.000 0.00 0.00 35.48 3.41
5323 5704 4.309933 GAAAAAGCTTGTCCCTCAAATGG 58.690 43.478 0.00 0.00 35.48 3.16
5324 5705 3.983344 CGAAAAAGCTTGTCCCTCAAATG 59.017 43.478 0.00 0.00 35.48 2.32
5325 5706 3.888930 TCGAAAAAGCTTGTCCCTCAAAT 59.111 39.130 0.00 0.00 35.48 2.32
5326 5707 3.283751 TCGAAAAAGCTTGTCCCTCAAA 58.716 40.909 0.00 0.00 35.48 2.69
5327 5708 2.925724 TCGAAAAAGCTTGTCCCTCAA 58.074 42.857 0.00 0.00 34.61 3.02
5328 5709 2.616842 GTTCGAAAAAGCTTGTCCCTCA 59.383 45.455 0.00 0.00 0.00 3.86
5329 5710 2.349532 CGTTCGAAAAAGCTTGTCCCTC 60.350 50.000 0.00 0.00 0.00 4.30
5330 5711 1.602377 CGTTCGAAAAAGCTTGTCCCT 59.398 47.619 0.00 0.00 0.00 4.20
5331 5712 1.334689 CCGTTCGAAAAAGCTTGTCCC 60.335 52.381 0.00 0.00 0.00 4.46
5332 5713 1.600485 TCCGTTCGAAAAAGCTTGTCC 59.400 47.619 0.00 0.00 0.00 4.02
5333 5714 3.226347 CATCCGTTCGAAAAAGCTTGTC 58.774 45.455 0.00 0.00 0.00 3.18
5334 5715 2.031157 CCATCCGTTCGAAAAAGCTTGT 60.031 45.455 0.00 0.00 0.00 3.16
5335 5716 2.225491 TCCATCCGTTCGAAAAAGCTTG 59.775 45.455 0.00 0.00 0.00 4.01
5336 5717 2.484264 CTCCATCCGTTCGAAAAAGCTT 59.516 45.455 0.00 0.00 0.00 3.74
5337 5718 2.076863 CTCCATCCGTTCGAAAAAGCT 58.923 47.619 0.00 0.00 0.00 3.74
5338 5719 1.804748 ACTCCATCCGTTCGAAAAAGC 59.195 47.619 0.00 0.00 0.00 3.51
5339 5720 8.758633 ATATATACTCCATCCGTTCGAAAAAG 57.241 34.615 0.00 0.00 0.00 2.27
5340 5721 9.199982 GAATATATACTCCATCCGTTCGAAAAA 57.800 33.333 0.00 0.00 0.00 1.94
5341 5722 8.582437 AGAATATATACTCCATCCGTTCGAAAA 58.418 33.333 0.00 0.00 0.00 2.29
5342 5723 8.118976 AGAATATATACTCCATCCGTTCGAAA 57.881 34.615 0.00 0.00 0.00 3.46
5343 5724 7.698506 AGAATATATACTCCATCCGTTCGAA 57.301 36.000 0.00 0.00 0.00 3.71
5344 5725 7.392393 TGAAGAATATATACTCCATCCGTTCGA 59.608 37.037 0.00 0.00 0.00 3.71
5345 5726 7.535997 TGAAGAATATATACTCCATCCGTTCG 58.464 38.462 0.00 0.00 0.00 3.95
5346 5727 8.740906 TCTGAAGAATATATACTCCATCCGTTC 58.259 37.037 0.00 0.00 0.00 3.95
5347 5728 8.651589 TCTGAAGAATATATACTCCATCCGTT 57.348 34.615 0.00 0.00 0.00 4.44
5348 5729 8.830915 ATCTGAAGAATATATACTCCATCCGT 57.169 34.615 0.00 0.00 0.00 4.69
5349 5730 9.743057 GAATCTGAAGAATATATACTCCATCCG 57.257 37.037 0.00 0.00 0.00 4.18
5378 5767 5.181811 CACAAGACTGGCACAATAGAAATGA 59.818 40.000 0.00 0.00 38.70 2.57
5470 5859 2.380064 AACCCAGGCACAATTGAAGA 57.620 45.000 13.59 0.00 0.00 2.87
5488 5877 2.100252 ACGTCAGTCCGAGTGAAGAAAA 59.900 45.455 21.55 0.00 32.52 2.29
5489 5878 1.679680 ACGTCAGTCCGAGTGAAGAAA 59.320 47.619 21.55 0.00 32.52 2.52
5490 5879 1.001706 CACGTCAGTCCGAGTGAAGAA 60.002 52.381 21.55 0.00 36.79 2.52
5734 6136 4.649218 TGATACAGATGCAGCCTACAAGTA 59.351 41.667 0.00 0.00 0.00 2.24
5787 6189 1.290203 GTGTATGTGCACAGATCCGG 58.710 55.000 25.84 0.00 39.07 5.14
5820 6222 1.943693 CAACAACGGCAAACCAGCG 60.944 57.895 0.00 0.00 34.57 5.18
5831 6233 8.849490 CAAACCAATAAGAATATCACAACAACG 58.151 33.333 0.00 0.00 0.00 4.10
5839 6241 8.537728 AGGCAATCAAACCAATAAGAATATCA 57.462 30.769 0.00 0.00 0.00 2.15
5861 6263 4.153117 CAGATAACAGAACACAGTCAAGGC 59.847 45.833 0.00 0.00 0.00 4.35
5883 6285 7.731054 TCAACACATGCTGGTATATATACACA 58.269 34.615 21.56 16.50 34.98 3.72
5884 6286 8.601845 TTCAACACATGCTGGTATATATACAC 57.398 34.615 21.56 12.78 34.98 2.90
5902 6307 6.127403 GTGAAATTCGTCTGTACTTCAACAC 58.873 40.000 0.00 0.00 0.00 3.32
5932 6337 6.671190 TCATCAACACTGATCAACAAATCAC 58.329 36.000 0.00 0.00 40.49 3.06
5955 6360 6.148480 GGATAGACATATCAACAGGTTGCATC 59.852 42.308 7.28 0.00 39.76 3.91
5993 6414 9.941325 AATAAAGGATTTGTCATTGTGCATTTA 57.059 25.926 0.00 0.00 39.63 1.40
5994 6415 8.851541 AATAAAGGATTTGTCATTGTGCATTT 57.148 26.923 0.00 0.00 39.63 2.32
5995 6416 8.851541 AAATAAAGGATTTGTCATTGTGCATT 57.148 26.923 0.00 0.00 39.63 3.56
5997 6418 9.941325 AATAAATAAAGGATTTGTCATTGTGCA 57.059 25.926 0.00 0.00 39.63 4.57
6003 6424 9.801873 CAACGGAATAAATAAAGGATTTGTCAT 57.198 29.630 0.00 0.00 39.63 3.06
6004 6425 8.247562 CCAACGGAATAAATAAAGGATTTGTCA 58.752 33.333 0.00 0.00 39.63 3.58
6024 6445 2.607635 GTGCTACATGTATCACCAACGG 59.392 50.000 23.32 4.03 0.00 4.44
6025 6446 3.258228 TGTGCTACATGTATCACCAACG 58.742 45.455 28.11 8.36 32.81 4.10
6026 6447 4.875536 TGATGTGCTACATGTATCACCAAC 59.124 41.667 28.11 20.83 39.27 3.77
6028 6449 4.751767 TGATGTGCTACATGTATCACCA 57.248 40.909 28.11 19.98 39.27 4.17
6029 6450 4.512944 CCTTGATGTGCTACATGTATCACC 59.487 45.833 28.11 18.16 39.27 4.02
6035 6457 4.256920 GTCTTCCTTGATGTGCTACATGT 58.743 43.478 2.69 2.69 39.27 3.21
6056 6478 1.183549 ATGTCTTCCCTACTTCGCGT 58.816 50.000 5.77 0.00 0.00 6.01
6059 6481 5.127356 AGGAAAGTATGTCTTCCCTACTTCG 59.873 44.000 0.00 0.00 39.16 3.79
6080 6502 2.507886 TGTGTTTCCTTTCAGTCCAGGA 59.492 45.455 0.00 0.00 37.42 3.86
6090 6512 5.763204 CACTACTATGGTGTGTGTTTCCTTT 59.237 40.000 8.34 0.00 31.62 3.11
6091 6513 5.163237 ACACTACTATGGTGTGTGTTTCCTT 60.163 40.000 13.96 0.00 44.82 3.36
6092 6514 4.347000 ACACTACTATGGTGTGTGTTTCCT 59.653 41.667 13.96 0.00 44.82 3.36
6093 6515 4.638304 ACACTACTATGGTGTGTGTTTCC 58.362 43.478 13.96 0.00 44.82 3.13
6094 6516 6.927381 AGTTACACTACTATGGTGTGTGTTTC 59.073 38.462 21.01 15.77 45.83 2.78
6095 6517 6.823497 AGTTACACTACTATGGTGTGTGTTT 58.177 36.000 21.01 10.00 45.83 2.83
6096 6518 6.041182 TGAGTTACACTACTATGGTGTGTGTT 59.959 38.462 21.01 9.24 45.83 3.32
6097 6519 5.537295 TGAGTTACACTACTATGGTGTGTGT 59.463 40.000 20.16 20.16 45.83 3.72
6098 6520 6.020971 TGAGTTACACTACTATGGTGTGTG 57.979 41.667 19.89 16.61 45.83 3.82
6099 6521 6.659745 TTGAGTTACACTACTATGGTGTGT 57.340 37.500 16.92 16.92 45.83 3.72
6100 6522 6.590292 CCTTTGAGTTACACTACTATGGTGTG 59.410 42.308 8.09 9.21 45.83 3.82
6102 6524 6.931838 TCCTTTGAGTTACACTACTATGGTG 58.068 40.000 0.00 0.00 40.19 4.17
6103 6525 7.549147 TTCCTTTGAGTTACACTACTATGGT 57.451 36.000 0.00 0.00 0.00 3.55
6107 6529 9.918630 GTGTATTTCCTTTGAGTTACACTACTA 57.081 33.333 0.00 0.00 37.51 1.82
6108 6530 8.426489 TGTGTATTTCCTTTGAGTTACACTACT 58.574 33.333 11.07 0.00 39.26 2.57
6109 6531 8.493547 GTGTGTATTTCCTTTGAGTTACACTAC 58.506 37.037 11.07 5.66 39.26 2.73
6110 6532 7.383029 CGTGTGTATTTCCTTTGAGTTACACTA 59.617 37.037 11.07 0.00 39.26 2.74
6111 6533 6.202188 CGTGTGTATTTCCTTTGAGTTACACT 59.798 38.462 11.07 0.00 39.26 3.55
6112 6534 6.201425 TCGTGTGTATTTCCTTTGAGTTACAC 59.799 38.462 0.00 0.00 39.12 2.90
6113 6535 6.201425 GTCGTGTGTATTTCCTTTGAGTTACA 59.799 38.462 0.00 0.00 0.00 2.41
6114 6536 6.201425 TGTCGTGTGTATTTCCTTTGAGTTAC 59.799 38.462 0.00 0.00 0.00 2.50
6115 6537 6.282167 TGTCGTGTGTATTTCCTTTGAGTTA 58.718 36.000 0.00 0.00 0.00 2.24
6116 6538 5.120399 TGTCGTGTGTATTTCCTTTGAGTT 58.880 37.500 0.00 0.00 0.00 3.01
6117 6539 4.699637 TGTCGTGTGTATTTCCTTTGAGT 58.300 39.130 0.00 0.00 0.00 3.41
6118 6540 5.666969 TTGTCGTGTGTATTTCCTTTGAG 57.333 39.130 0.00 0.00 0.00 3.02
6119 6541 5.818336 TCTTTGTCGTGTGTATTTCCTTTGA 59.182 36.000 0.00 0.00 0.00 2.69
6120 6542 6.055231 TCTTTGTCGTGTGTATTTCCTTTG 57.945 37.500 0.00 0.00 0.00 2.77
6121 6543 6.293955 CCATCTTTGTCGTGTGTATTTCCTTT 60.294 38.462 0.00 0.00 0.00 3.11
6122 6544 5.181245 CCATCTTTGTCGTGTGTATTTCCTT 59.819 40.000 0.00 0.00 0.00 3.36
6123 6545 4.695455 CCATCTTTGTCGTGTGTATTTCCT 59.305 41.667 0.00 0.00 0.00 3.36
6124 6546 4.454504 ACCATCTTTGTCGTGTGTATTTCC 59.545 41.667 0.00 0.00 0.00 3.13
6125 6547 5.607119 ACCATCTTTGTCGTGTGTATTTC 57.393 39.130 0.00 0.00 0.00 2.17
6126 6548 6.228258 ACTACCATCTTTGTCGTGTGTATTT 58.772 36.000 0.00 0.00 0.00 1.40
6127 6549 5.790593 ACTACCATCTTTGTCGTGTGTATT 58.209 37.500 0.00 0.00 0.00 1.89
6128 6550 5.401531 ACTACCATCTTTGTCGTGTGTAT 57.598 39.130 0.00 0.00 0.00 2.29
6129 6551 4.859304 ACTACCATCTTTGTCGTGTGTA 57.141 40.909 0.00 0.00 0.00 2.90
6130 6552 3.746045 ACTACCATCTTTGTCGTGTGT 57.254 42.857 0.00 0.00 0.00 3.72
6131 6553 6.347402 CCTTTAACTACCATCTTTGTCGTGTG 60.347 42.308 0.00 0.00 0.00 3.82
6132 6554 5.699458 CCTTTAACTACCATCTTTGTCGTGT 59.301 40.000 0.00 0.00 0.00 4.49
6133 6555 5.929992 TCCTTTAACTACCATCTTTGTCGTG 59.070 40.000 0.00 0.00 0.00 4.35
6134 6556 6.105397 TCCTTTAACTACCATCTTTGTCGT 57.895 37.500 0.00 0.00 0.00 4.34
6135 6557 7.429636 TTTCCTTTAACTACCATCTTTGTCG 57.570 36.000 0.00 0.00 0.00 4.35
6137 6559 9.802039 TGTATTTCCTTTAACTACCATCTTTGT 57.198 29.630 0.00 0.00 0.00 2.83
6139 6561 9.802039 TGTGTATTTCCTTTAACTACCATCTTT 57.198 29.630 0.00 0.00 0.00 2.52
6140 6562 9.227777 GTGTGTATTTCCTTTAACTACCATCTT 57.772 33.333 0.00 0.00 0.00 2.40
6141 6563 7.548075 CGTGTGTATTTCCTTTAACTACCATCT 59.452 37.037 0.00 0.00 0.00 2.90
6142 6564 7.546667 TCGTGTGTATTTCCTTTAACTACCATC 59.453 37.037 0.00 0.00 0.00 3.51
6143 6565 7.332678 GTCGTGTGTATTTCCTTTAACTACCAT 59.667 37.037 0.00 0.00 0.00 3.55
6144 6566 6.646240 GTCGTGTGTATTTCCTTTAACTACCA 59.354 38.462 0.00 0.00 0.00 3.25
6145 6567 6.646240 TGTCGTGTGTATTTCCTTTAACTACC 59.354 38.462 0.00 0.00 0.00 3.18
6146 6568 7.642071 TGTCGTGTGTATTTCCTTTAACTAC 57.358 36.000 0.00 0.00 0.00 2.73
6147 6569 8.659925 TTTGTCGTGTGTATTTCCTTTAACTA 57.340 30.769 0.00 0.00 0.00 2.24
6148 6570 7.496591 TCTTTGTCGTGTGTATTTCCTTTAACT 59.503 33.333 0.00 0.00 0.00 2.24
6149 6571 7.632721 TCTTTGTCGTGTGTATTTCCTTTAAC 58.367 34.615 0.00 0.00 0.00 2.01
6150 6572 7.789273 TCTTTGTCGTGTGTATTTCCTTTAA 57.211 32.000 0.00 0.00 0.00 1.52
6151 6573 7.972832 ATCTTTGTCGTGTGTATTTCCTTTA 57.027 32.000 0.00 0.00 0.00 1.85
6180 6602 0.790814 GCTCAAGCGTCTGTACCAAC 59.209 55.000 0.00 0.00 0.00 3.77
6181 6603 3.210857 GCTCAAGCGTCTGTACCAA 57.789 52.632 0.00 0.00 0.00 3.67
6227 6653 7.277319 CAGAGTAAATAAAAACGGAGGGAGTAC 59.723 40.741 0.00 0.00 0.00 2.73
6228 6654 7.325694 CAGAGTAAATAAAAACGGAGGGAGTA 58.674 38.462 0.00 0.00 0.00 2.59
6229 6655 6.171213 CAGAGTAAATAAAAACGGAGGGAGT 58.829 40.000 0.00 0.00 0.00 3.85
6230 6656 5.064834 GCAGAGTAAATAAAAACGGAGGGAG 59.935 44.000 0.00 0.00 0.00 4.30
6231 6657 4.939439 GCAGAGTAAATAAAAACGGAGGGA 59.061 41.667 0.00 0.00 0.00 4.20
6232 6658 4.698304 TGCAGAGTAAATAAAAACGGAGGG 59.302 41.667 0.00 0.00 0.00 4.30
6233 6659 5.873179 TGCAGAGTAAATAAAAACGGAGG 57.127 39.130 0.00 0.00 0.00 4.30
6234 6660 5.739161 GCATGCAGAGTAAATAAAAACGGAG 59.261 40.000 14.21 0.00 0.00 4.63
6235 6661 5.182190 TGCATGCAGAGTAAATAAAAACGGA 59.818 36.000 18.46 0.00 0.00 4.69
6236 6662 5.398169 TGCATGCAGAGTAAATAAAAACGG 58.602 37.500 18.46 0.00 0.00 4.44
6237 6663 8.786937 ATATGCATGCAGAGTAAATAAAAACG 57.213 30.769 26.69 0.00 0.00 3.60
6244 6670 8.781196 CAACTCTAATATGCATGCAGAGTAAAT 58.219 33.333 29.15 17.24 43.88 1.40
6245 6671 7.986889 TCAACTCTAATATGCATGCAGAGTAAA 59.013 33.333 29.15 20.67 43.88 2.01
6246 6672 7.439356 GTCAACTCTAATATGCATGCAGAGTAA 59.561 37.037 29.15 20.93 43.88 2.24
6247 6673 6.925718 GTCAACTCTAATATGCATGCAGAGTA 59.074 38.462 29.15 25.08 43.88 2.59
6248 6674 5.757320 GTCAACTCTAATATGCATGCAGAGT 59.243 40.000 25.61 25.61 45.98 3.24
6249 6675 5.990386 AGTCAACTCTAATATGCATGCAGAG 59.010 40.000 26.69 25.43 38.92 3.35
6250 6676 5.756833 CAGTCAACTCTAATATGCATGCAGA 59.243 40.000 26.69 22.88 0.00 4.26
6251 6677 5.756833 TCAGTCAACTCTAATATGCATGCAG 59.243 40.000 26.69 12.05 0.00 4.41
6252 6678 5.673514 TCAGTCAACTCTAATATGCATGCA 58.326 37.500 25.04 25.04 0.00 3.96
6253 6679 6.259608 ACTTCAGTCAACTCTAATATGCATGC 59.740 38.462 11.82 11.82 0.00 4.06
6254 6680 7.783090 ACTTCAGTCAACTCTAATATGCATG 57.217 36.000 10.16 0.00 0.00 4.06
6426 6852 6.253512 GTCAAGCTTTACAAACTTTGACCAAG 59.746 38.462 8.55 7.77 38.64 3.61
6427 6853 6.071616 AGTCAAGCTTTACAAACTTTGACCAA 60.072 34.615 13.07 0.00 0.00 3.67
6428 6854 5.417580 AGTCAAGCTTTACAAACTTTGACCA 59.582 36.000 13.07 0.00 0.00 4.02
6429 6855 5.891451 AGTCAAGCTTTACAAACTTTGACC 58.109 37.500 13.07 0.00 0.00 4.02
6430 6856 7.812309 AAAGTCAAGCTTTACAAACTTTGAC 57.188 32.000 13.07 6.64 44.90 3.18
6433 6859 6.811665 GGTCAAAGTCAAGCTTTACAAACTTT 59.188 34.615 13.07 12.29 44.95 2.66
6434 6860 6.071616 TGGTCAAAGTCAAGCTTTACAAACTT 60.072 34.615 13.07 7.60 44.95 2.66
6435 6861 5.417580 TGGTCAAAGTCAAGCTTTACAAACT 59.582 36.000 13.07 2.11 44.95 2.66
6436 6862 5.646606 TGGTCAAAGTCAAGCTTTACAAAC 58.353 37.500 13.07 5.27 44.95 2.93
6437 6863 5.906113 TGGTCAAAGTCAAGCTTTACAAA 57.094 34.783 13.07 0.00 44.95 2.83
6438 6864 5.906113 TTGGTCAAAGTCAAGCTTTACAA 57.094 34.783 13.07 0.00 44.95 2.41
6439 6865 5.906113 TTTGGTCAAAGTCAAGCTTTACA 57.094 34.783 13.07 0.00 44.95 2.41
6440 6866 6.330278 AGTTTTGGTCAAAGTCAAGCTTTAC 58.670 36.000 2.40 2.40 44.95 2.01
6441 6867 6.524101 AGTTTTGGTCAAAGTCAAGCTTTA 57.476 33.333 0.00 0.00 44.95 1.85
6443 6869 6.524101 TTAGTTTTGGTCAAAGTCAAGCTT 57.476 33.333 0.00 0.00 39.52 3.74
6444 6870 6.715347 ATTAGTTTTGGTCAAAGTCAAGCT 57.285 33.333 0.00 0.00 30.16 3.74
6445 6871 7.062255 GCATATTAGTTTTGGTCAAAGTCAAGC 59.938 37.037 0.00 0.00 30.16 4.01
6446 6872 7.271223 CGCATATTAGTTTTGGTCAAAGTCAAG 59.729 37.037 0.00 0.00 30.16 3.02
6447 6873 7.041030 TCGCATATTAGTTTTGGTCAAAGTCAA 60.041 33.333 0.00 0.00 30.16 3.18
6448 6874 6.428465 TCGCATATTAGTTTTGGTCAAAGTCA 59.572 34.615 0.00 0.00 30.16 3.41
6449 6875 6.837992 TCGCATATTAGTTTTGGTCAAAGTC 58.162 36.000 0.00 0.00 30.16 3.01
6450 6876 6.811253 TCGCATATTAGTTTTGGTCAAAGT 57.189 33.333 0.00 0.00 32.41 2.66
6451 6877 7.305474 AGTTCGCATATTAGTTTTGGTCAAAG 58.695 34.615 0.00 0.00 0.00 2.77
6452 6878 7.209471 AGTTCGCATATTAGTTTTGGTCAAA 57.791 32.000 0.00 0.00 0.00 2.69
6453 6879 6.811253 AGTTCGCATATTAGTTTTGGTCAA 57.189 33.333 0.00 0.00 0.00 3.18
6454 6880 7.908827 TTAGTTCGCATATTAGTTTTGGTCA 57.091 32.000 0.00 0.00 0.00 4.02
6462 6888 9.925268 CCGTTTTTATTTAGTTCGCATATTAGT 57.075 29.630 0.00 0.00 0.00 2.24
6465 6891 8.126700 CCTCCGTTTTTATTTAGTTCGCATATT 58.873 33.333 0.00 0.00 0.00 1.28
6466 6892 7.255001 CCCTCCGTTTTTATTTAGTTCGCATAT 60.255 37.037 0.00 0.00 0.00 1.78
6467 6893 6.037391 CCCTCCGTTTTTATTTAGTTCGCATA 59.963 38.462 0.00 0.00 0.00 3.14
6468 6894 5.163693 CCCTCCGTTTTTATTTAGTTCGCAT 60.164 40.000 0.00 0.00 0.00 4.73
6469 6895 4.154556 CCCTCCGTTTTTATTTAGTTCGCA 59.845 41.667 0.00 0.00 0.00 5.10
6470 6896 4.392754 TCCCTCCGTTTTTATTTAGTTCGC 59.607 41.667 0.00 0.00 0.00 4.70
6471 6897 5.640783 ACTCCCTCCGTTTTTATTTAGTTCG 59.359 40.000 0.00 0.00 0.00 3.95
6472 6898 7.201470 CGTACTCCCTCCGTTTTTATTTAGTTC 60.201 40.741 0.00 0.00 0.00 3.01
6473 6899 6.591448 CGTACTCCCTCCGTTTTTATTTAGTT 59.409 38.462 0.00 0.00 0.00 2.24
6474 6900 6.101997 CGTACTCCCTCCGTTTTTATTTAGT 58.898 40.000 0.00 0.00 0.00 2.24
6475 6901 6.035327 CACGTACTCCCTCCGTTTTTATTTAG 59.965 42.308 0.00 0.00 31.46 1.85
6476 6902 5.868801 CACGTACTCCCTCCGTTTTTATTTA 59.131 40.000 0.00 0.00 31.46 1.40
6477 6903 4.692155 CACGTACTCCCTCCGTTTTTATTT 59.308 41.667 0.00 0.00 31.46 1.40
6478 6904 4.248058 CACGTACTCCCTCCGTTTTTATT 58.752 43.478 0.00 0.00 31.46 1.40
6479 6905 3.853475 CACGTACTCCCTCCGTTTTTAT 58.147 45.455 0.00 0.00 31.46 1.40
6480 6906 2.610232 GCACGTACTCCCTCCGTTTTTA 60.610 50.000 0.00 0.00 31.46 1.52
6481 6907 1.875157 GCACGTACTCCCTCCGTTTTT 60.875 52.381 0.00 0.00 31.46 1.94
6482 6908 0.320160 GCACGTACTCCCTCCGTTTT 60.320 55.000 0.00 0.00 31.46 2.43
6483 6909 1.183676 AGCACGTACTCCCTCCGTTT 61.184 55.000 0.00 0.00 31.46 3.60
6484 6910 0.322816 TAGCACGTACTCCCTCCGTT 60.323 55.000 0.00 0.00 31.46 4.44
6485 6911 1.028868 GTAGCACGTACTCCCTCCGT 61.029 60.000 0.00 0.00 34.71 4.69
6486 6912 1.028330 TGTAGCACGTACTCCCTCCG 61.028 60.000 0.00 0.00 32.19 4.63
6487 6913 0.739561 CTGTAGCACGTACTCCCTCC 59.260 60.000 0.00 0.00 32.19 4.30
6488 6914 0.100861 GCTGTAGCACGTACTCCCTC 59.899 60.000 0.00 0.00 41.59 4.30
6489 6915 0.323542 AGCTGTAGCACGTACTCCCT 60.324 55.000 6.65 0.00 45.16 4.20
6490 6916 0.179134 CAGCTGTAGCACGTACTCCC 60.179 60.000 5.25 0.00 45.16 4.30
6491 6917 0.802607 GCAGCTGTAGCACGTACTCC 60.803 60.000 16.64 0.00 45.16 3.85
6492 6918 0.109272 TGCAGCTGTAGCACGTACTC 60.109 55.000 16.64 0.00 45.16 2.59
6493 6919 0.109086 CTGCAGCTGTAGCACGTACT 60.109 55.000 19.21 0.00 45.16 2.73
6504 6930 1.669779 GTGGCTTTAGATCTGCAGCTG 59.330 52.381 21.19 10.11 32.52 4.24
6544 6970 5.116180 GGTTCATGTGCTAGCTTACATACA 58.884 41.667 17.56 12.07 35.86 2.29
6593 7019 0.035598 TCCCGTTCGAAAATCCAGCA 59.964 50.000 0.00 0.00 0.00 4.41
6613 7039 0.837940 GGTACTGATTCCTGGGTCCC 59.162 60.000 0.00 0.00 0.00 4.46
6616 7042 0.981277 CGGGGTACTGATTCCTGGGT 60.981 60.000 0.00 0.00 0.00 4.51
6617 7043 0.689745 TCGGGGTACTGATTCCTGGG 60.690 60.000 0.00 0.00 0.00 4.45
6618 7044 0.464452 GTCGGGGTACTGATTCCTGG 59.536 60.000 0.00 0.00 33.82 4.45
6619 7045 1.191535 TGTCGGGGTACTGATTCCTG 58.808 55.000 0.00 0.00 33.82 3.86
6620 7046 1.946984 TTGTCGGGGTACTGATTCCT 58.053 50.000 0.00 0.00 33.82 3.36
6622 7048 2.470821 CGATTGTCGGGGTACTGATTC 58.529 52.381 0.00 0.00 36.00 2.52
6623 7049 2.596904 CGATTGTCGGGGTACTGATT 57.403 50.000 0.00 0.00 36.00 2.57
6703 7157 4.477975 GGTCACCGGCTCTCGACG 62.478 72.222 0.00 0.00 42.75 5.12
6704 7158 4.131088 GGGTCACCGGCTCTCGAC 62.131 72.222 0.00 0.16 42.43 4.20
6724 7178 3.955101 CTCCGTCGCTCCTAGCCG 61.955 72.222 0.00 0.00 38.18 5.52
6725 7179 4.273257 GCTCCGTCGCTCCTAGCC 62.273 72.222 0.00 0.00 38.18 3.93
6726 7180 4.273257 GGCTCCGTCGCTCCTAGC 62.273 72.222 0.00 0.00 38.02 3.42
6727 7181 2.065906 GAAGGCTCCGTCGCTCCTAG 62.066 65.000 0.00 0.00 0.00 3.02
6728 7182 2.044252 AAGGCTCCGTCGCTCCTA 60.044 61.111 0.00 0.00 0.00 2.94
6729 7183 3.453679 GAAGGCTCCGTCGCTCCT 61.454 66.667 0.00 0.00 0.00 3.69
6730 7184 2.962697 GATGAAGGCTCCGTCGCTCC 62.963 65.000 0.00 0.00 0.00 4.70
6731 7185 1.590259 GATGAAGGCTCCGTCGCTC 60.590 63.158 0.00 0.00 0.00 5.03
6732 7186 2.010582 GAGATGAAGGCTCCGTCGCT 62.011 60.000 0.00 0.00 0.00 4.93
6733 7187 1.590259 GAGATGAAGGCTCCGTCGC 60.590 63.158 0.00 0.00 0.00 5.19
6734 7188 1.298713 CGAGATGAAGGCTCCGTCG 60.299 63.158 0.00 0.00 0.00 5.12
6735 7189 1.590259 GCGAGATGAAGGCTCCGTC 60.590 63.158 0.00 0.00 0.00 4.79
6884 7338 6.482524 ACTACACAACATCTCCTGAGTACTA 58.517 40.000 0.00 0.00 0.00 1.82
6885 7339 5.326069 ACTACACAACATCTCCTGAGTACT 58.674 41.667 0.00 0.00 0.00 2.73
6886 7340 5.646577 ACTACACAACATCTCCTGAGTAC 57.353 43.478 0.00 0.00 0.00 2.73
6887 7341 5.538813 ACAACTACACAACATCTCCTGAGTA 59.461 40.000 0.00 0.00 0.00 2.59
6888 7342 4.345257 ACAACTACACAACATCTCCTGAGT 59.655 41.667 0.00 0.00 0.00 3.41
6889 7343 4.687948 CACAACTACACAACATCTCCTGAG 59.312 45.833 0.00 0.00 0.00 3.35
6890 7344 4.100963 ACACAACTACACAACATCTCCTGA 59.899 41.667 0.00 0.00 0.00 3.86
6906 7360 1.094785 AAGCTCACGCAAACACAACT 58.905 45.000 0.00 0.00 39.10 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.