Multiple sequence alignment - TraesCS2B01G479700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G479700 chr2B 100.000 4685 0 0 1 4685 677019609 677024293 0.000000e+00 8652.0
1 TraesCS2B01G479700 chr2B 90.164 61 6 0 4063 4123 660157773 660157833 3.890000e-11 80.5
2 TraesCS2B01G479700 chr2A 88.971 2711 198 52 1718 4372 705740710 705743375 0.000000e+00 3256.0
3 TraesCS2B01G479700 chr2A 87.969 640 34 18 838 1457 705739985 705740601 0.000000e+00 715.0
4 TraesCS2B01G479700 chr2A 92.759 290 13 4 4403 4684 705743379 705743668 3.370000e-111 412.0
5 TraesCS2B01G479700 chr2D 92.962 2103 120 15 1717 3805 565154492 565156580 0.000000e+00 3038.0
6 TraesCS2B01G479700 chr2D 82.308 1040 102 60 3653 4663 570135049 570136035 0.000000e+00 826.0
7 TraesCS2B01G479700 chr2D 86.769 718 60 16 3977 4680 565156918 565157614 0.000000e+00 767.0
8 TraesCS2B01G479700 chr2D 89.499 619 37 11 834 1433 565153717 565154326 0.000000e+00 758.0
9 TraesCS2B01G479700 chr2D 90.380 447 39 2 3207 3652 570134248 570134691 6.760000e-163 584.0
10 TraesCS2B01G479700 chr2D 87.500 48 6 0 4088 4135 347802777 347802730 6.550000e-04 56.5
11 TraesCS2B01G479700 chr7A 84.534 569 65 16 1 554 593552826 593552266 4.120000e-150 542.0
12 TraesCS2B01G479700 chr4B 82.468 462 70 7 1 455 454691237 454690780 1.220000e-105 394.0
13 TraesCS2B01G479700 chr7B 84.461 399 55 6 1 398 177869993 177870385 2.040000e-103 387.0
14 TraesCS2B01G479700 chr7B 82.540 378 52 11 1 369 442602683 442602311 2.100000e-83 320.0
15 TraesCS2B01G479700 chr7B 90.909 66 4 2 365 429 215295604 215295668 2.320000e-13 87.9
16 TraesCS2B01G479700 chr3D 84.755 387 47 10 1 381 332798394 332798014 1.230000e-100 377.0
17 TraesCS2B01G479700 chr3D 86.068 323 40 5 1 322 157981876 157981558 4.490000e-90 342.0
18 TraesCS2B01G479700 chr3D 92.982 57 4 0 365 421 152109948 152109892 3.000000e-12 84.2
19 TraesCS2B01G479700 chr6D 87.234 329 32 6 1 323 125093325 125093001 2.660000e-97 366.0
20 TraesCS2B01G479700 chr6D 79.200 125 20 6 309 429 409884964 409885086 1.080000e-11 82.4
21 TraesCS2B01G479700 chr6A 79.138 580 78 29 1 552 155443930 155444494 1.240000e-95 361.0
22 TraesCS2B01G479700 chr6B 83.127 403 55 12 1 398 672866345 672865951 5.770000e-94 355.0
23 TraesCS2B01G479700 chr5B 98.305 59 1 0 1498 1556 444666954 444667012 2.310000e-18 104.0
24 TraesCS2B01G479700 chr5B 97.674 43 1 0 1456 1498 444666893 444666935 1.810000e-09 75.0
25 TraesCS2B01G479700 chr5B 94.000 50 1 2 1543 1590 444667016 444667065 1.810000e-09 75.0
26 TraesCS2B01G479700 chr5B 92.857 42 3 0 4088 4129 703642629 703642670 1.410000e-05 62.1
27 TraesCS2B01G479700 chr4D 88.889 81 6 3 345 423 293348721 293348642 3.860000e-16 97.1
28 TraesCS2B01G479700 chr1A 82.000 100 17 1 354 452 153621736 153621637 3.000000e-12 84.2
29 TraesCS2B01G479700 chr1A 91.111 45 4 0 4079 4123 298603638 298603682 1.410000e-05 62.1
30 TraesCS2B01G479700 chr7D 91.111 45 4 0 4085 4129 4027581 4027537 1.410000e-05 62.1
31 TraesCS2B01G479700 chr7D 91.111 45 4 0 4079 4123 117234523 117234567 1.410000e-05 62.1
32 TraesCS2B01G479700 chr1D 89.583 48 5 0 4085 4132 249030364 249030317 1.410000e-05 62.1
33 TraesCS2B01G479700 chr1D 91.111 45 4 0 4085 4129 372835799 372835755 1.410000e-05 62.1
34 TraesCS2B01G479700 chr1D 91.111 45 4 0 4085 4129 484242422 484242378 1.410000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G479700 chr2B 677019609 677024293 4684 False 8652 8652 100.000000 1 4685 1 chr2B.!!$F2 4684
1 TraesCS2B01G479700 chr2A 705739985 705743668 3683 False 1461 3256 89.899667 838 4684 3 chr2A.!!$F1 3846
2 TraesCS2B01G479700 chr2D 565153717 565157614 3897 False 1521 3038 89.743333 834 4680 3 chr2D.!!$F1 3846
3 TraesCS2B01G479700 chr2D 570134248 570136035 1787 False 705 826 86.344000 3207 4663 2 chr2D.!!$F2 1456
4 TraesCS2B01G479700 chr7A 593552266 593552826 560 True 542 542 84.534000 1 554 1 chr7A.!!$R1 553
5 TraesCS2B01G479700 chr6A 155443930 155444494 564 False 361 361 79.138000 1 552 1 chr6A.!!$F1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
678 716 0.036732 AGCCAATCAGAACGCCTCAA 59.963 50.0 0.00 0.00 0.00 3.02 F
1467 1540 0.034863 TTTACTAAGGGCCCGCTTGG 60.035 55.0 18.44 11.11 37.09 3.61 F
1517 1590 0.317519 GGTCGTTTTGTTTCCAGGCG 60.318 55.0 0.00 0.00 0.00 5.52 F
1518 1591 0.379316 GTCGTTTTGTTTCCAGGCGT 59.621 50.0 0.00 0.00 0.00 5.68 F
1614 1688 0.460311 AACGAGAAGGAGTATGGCGG 59.540 55.0 0.00 0.00 0.00 6.13 F
3433 3556 0.552848 TGGGAGGCTGATCCATTTCC 59.447 55.0 0.00 0.00 41.52 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1563 1636 0.107214 TTAGGCTCCGCTTGGAATGG 60.107 55.000 0.00 0.00 42.58 3.16 R
2496 2602 0.832983 TTGCAAAAGCCCAGAGCCAT 60.833 50.000 0.00 0.00 45.47 4.40 R
3467 3590 0.529833 ACTCGACTGCTCCACATCTG 59.470 55.000 0.00 0.00 0.00 2.90 R
3503 3626 2.536761 ATGAAACCGGAGAAACACGA 57.463 45.000 9.46 0.00 0.00 4.35 R
3526 3649 1.210478 CTGGGTACAATCCAGGTCCAG 59.790 57.143 8.39 2.42 45.95 3.86 R
4346 5048 1.003112 TCCATAAACTGCCGCCGTT 60.003 52.632 0.00 0.00 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 3.373877 GGTGACCTCTTCCATCTAGGGTA 60.374 52.174 0.00 0.00 38.24 3.69
71 72 3.751175 CCAAGAGTAACAAGATCCGCAAA 59.249 43.478 0.00 0.00 0.00 3.68
87 88 3.885297 CCGCAAAGGATTAGTGGATGAAT 59.115 43.478 0.00 0.00 45.00 2.57
104 106 9.342308 GTGGATGAATTAAATATCTCTTGGTGA 57.658 33.333 0.00 0.00 0.00 4.02
105 107 9.565090 TGGATGAATTAAATATCTCTTGGTGAG 57.435 33.333 0.00 0.00 43.96 3.51
118 120 6.279513 CTCTTGGTGAGAAAGTGTAGATCT 57.720 41.667 0.00 0.00 45.39 2.75
164 166 3.683365 AATCAACAAGATTGGTTGGCC 57.317 42.857 0.00 0.00 45.11 5.36
177 179 0.915364 GTTGGCCAGGGAGAGAGATT 59.085 55.000 5.11 0.00 0.00 2.40
181 183 0.106521 GCCAGGGAGAGAGATTGAGC 59.893 60.000 0.00 0.00 0.00 4.26
196 198 4.943705 AGATTGAGCGAAAATGGAGCTTTA 59.056 37.500 0.00 0.00 41.84 1.85
198 200 5.446143 TTGAGCGAAAATGGAGCTTTAAA 57.554 34.783 0.00 0.00 41.84 1.52
216 218 6.546428 TTTAAACAACAATGGAGTTTGGGA 57.454 33.333 13.10 0.86 36.29 4.37
222 224 5.188751 ACAACAATGGAGTTTGGGAAAGAAA 59.811 36.000 0.00 0.00 0.00 2.52
223 225 5.948742 ACAATGGAGTTTGGGAAAGAAAA 57.051 34.783 0.00 0.00 0.00 2.29
230 232 3.068165 AGTTTGGGAAAGAAAAAGAGGCG 59.932 43.478 0.00 0.00 0.00 5.52
237 239 4.995487 GGAAAGAAAAAGAGGCGAGTCTTA 59.005 41.667 0.59 0.00 35.65 2.10
243 245 2.160721 AGAGGCGAGTCTTATTGGGA 57.839 50.000 0.00 0.00 0.00 4.37
259 261 2.942905 TGGGAAAGAAGACCCCCTATT 58.057 47.619 0.00 0.00 45.01 1.73
338 360 2.841881 ACCGCTTAAGGGATAGTTCCAA 59.158 45.455 20.33 0.00 44.60 3.53
348 370 3.057526 GGGATAGTTCCAAAACACAGTGC 60.058 47.826 0.00 0.00 44.60 4.40
369 393 3.695606 GACAGAGCACCCGAGGCA 61.696 66.667 0.00 0.00 0.00 4.75
455 482 1.137282 GGAACTAGCAGTGGTAGAGGC 59.863 57.143 30.87 19.39 37.13 4.70
456 483 1.825474 GAACTAGCAGTGGTAGAGGCA 59.175 52.381 30.87 0.00 37.13 4.75
457 484 2.166907 ACTAGCAGTGGTAGAGGCAT 57.833 50.000 30.87 9.60 37.13 4.40
459 486 3.850752 ACTAGCAGTGGTAGAGGCATAT 58.149 45.455 30.87 8.25 37.13 1.78
463 490 3.322254 AGCAGTGGTAGAGGCATATGTAC 59.678 47.826 4.29 0.00 0.00 2.90
465 492 3.568430 CAGTGGTAGAGGCATATGTACGA 59.432 47.826 4.29 0.00 0.00 3.43
507 545 2.493278 GGTACTACCGTTGCCTTACTGA 59.507 50.000 0.00 0.00 0.00 3.41
538 576 0.468226 AAACGAGTCCAGAGGCACAA 59.532 50.000 0.00 0.00 0.00 3.33
554 592 4.124238 GGCACAAATATAAGCGGTAGTGA 58.876 43.478 0.00 0.00 0.00 3.41
555 593 4.025145 GGCACAAATATAAGCGGTAGTGAC 60.025 45.833 0.00 0.00 0.00 3.67
556 594 4.809426 GCACAAATATAAGCGGTAGTGACT 59.191 41.667 0.00 0.00 0.00 3.41
557 595 5.276868 GCACAAATATAAGCGGTAGTGACTG 60.277 44.000 0.00 0.00 34.77 3.51
558 596 6.040247 CACAAATATAAGCGGTAGTGACTGA 58.960 40.000 0.00 0.00 33.27 3.41
559 597 6.199154 CACAAATATAAGCGGTAGTGACTGAG 59.801 42.308 0.00 0.00 33.27 3.35
560 598 2.873133 ATAAGCGGTAGTGACTGAGC 57.127 50.000 0.00 0.00 33.27 4.26
561 599 1.835494 TAAGCGGTAGTGACTGAGCT 58.165 50.000 0.00 0.01 33.27 4.09
562 600 1.835494 AAGCGGTAGTGACTGAGCTA 58.165 50.000 10.65 0.00 33.27 3.32
563 601 1.096416 AGCGGTAGTGACTGAGCTAC 58.904 55.000 8.98 0.00 37.45 3.58
564 602 0.809385 GCGGTAGTGACTGAGCTACA 59.191 55.000 0.00 0.00 39.30 2.74
565 603 1.201647 GCGGTAGTGACTGAGCTACAA 59.798 52.381 0.00 0.00 39.30 2.41
566 604 2.864968 CGGTAGTGACTGAGCTACAAC 58.135 52.381 0.00 0.00 39.30 3.32
567 605 2.728225 CGGTAGTGACTGAGCTACAACG 60.728 54.545 0.00 0.00 39.30 4.10
568 606 2.486982 GGTAGTGACTGAGCTACAACGA 59.513 50.000 0.00 0.00 39.30 3.85
569 607 3.057736 GGTAGTGACTGAGCTACAACGAA 60.058 47.826 0.00 0.00 39.30 3.85
570 608 3.728076 AGTGACTGAGCTACAACGAAA 57.272 42.857 0.00 0.00 0.00 3.46
571 609 4.258702 AGTGACTGAGCTACAACGAAAT 57.741 40.909 0.00 0.00 0.00 2.17
572 610 4.238514 AGTGACTGAGCTACAACGAAATC 58.761 43.478 0.00 0.00 0.00 2.17
573 611 4.021894 AGTGACTGAGCTACAACGAAATCT 60.022 41.667 0.00 0.00 0.00 2.40
574 612 4.090642 GTGACTGAGCTACAACGAAATCTG 59.909 45.833 0.00 0.00 0.00 2.90
575 613 2.996621 ACTGAGCTACAACGAAATCTGC 59.003 45.455 0.00 0.00 0.00 4.26
576 614 1.992667 TGAGCTACAACGAAATCTGCG 59.007 47.619 0.00 0.00 0.00 5.18
577 615 2.259618 GAGCTACAACGAAATCTGCGA 58.740 47.619 0.00 0.00 0.00 5.10
578 616 2.666508 GAGCTACAACGAAATCTGCGAA 59.333 45.455 0.00 0.00 0.00 4.70
579 617 3.064207 AGCTACAACGAAATCTGCGAAA 58.936 40.909 0.00 0.00 0.00 3.46
580 618 3.123621 AGCTACAACGAAATCTGCGAAAG 59.876 43.478 0.00 0.00 0.00 2.62
581 619 3.120649 GCTACAACGAAATCTGCGAAAGT 60.121 43.478 0.00 0.00 0.00 2.66
582 620 3.253371 ACAACGAAATCTGCGAAAGTG 57.747 42.857 0.00 0.00 0.00 3.16
583 621 2.032030 ACAACGAAATCTGCGAAAGTGG 60.032 45.455 0.00 0.00 0.00 4.00
584 622 1.156736 ACGAAATCTGCGAAAGTGGG 58.843 50.000 0.00 0.00 0.00 4.61
585 623 0.447801 CGAAATCTGCGAAAGTGGGG 59.552 55.000 0.00 0.00 0.00 4.96
586 624 0.171231 GAAATCTGCGAAAGTGGGGC 59.829 55.000 0.00 0.00 0.00 5.80
587 625 1.586154 AAATCTGCGAAAGTGGGGCG 61.586 55.000 0.00 0.00 0.00 6.13
588 626 3.976701 ATCTGCGAAAGTGGGGCGG 62.977 63.158 0.00 0.00 0.00 6.13
590 628 3.599285 CTGCGAAAGTGGGGCGGTA 62.599 63.158 0.00 0.00 0.00 4.02
591 629 2.818274 GCGAAAGTGGGGCGGTAG 60.818 66.667 0.00 0.00 0.00 3.18
592 630 2.660802 CGAAAGTGGGGCGGTAGT 59.339 61.111 0.00 0.00 0.00 2.73
593 631 1.892338 CGAAAGTGGGGCGGTAGTA 59.108 57.895 0.00 0.00 0.00 1.82
594 632 0.179119 CGAAAGTGGGGCGGTAGTAG 60.179 60.000 0.00 0.00 0.00 2.57
595 633 1.188863 GAAAGTGGGGCGGTAGTAGA 58.811 55.000 0.00 0.00 0.00 2.59
596 634 1.136500 GAAAGTGGGGCGGTAGTAGAG 59.864 57.143 0.00 0.00 0.00 2.43
597 635 0.686769 AAGTGGGGCGGTAGTAGAGG 60.687 60.000 0.00 0.00 0.00 3.69
598 636 2.443390 TGGGGCGGTAGTAGAGGC 60.443 66.667 0.00 0.00 0.00 4.70
599 637 3.603671 GGGGCGGTAGTAGAGGCG 61.604 72.222 0.00 0.00 0.00 5.52
600 638 3.603671 GGGCGGTAGTAGAGGCGG 61.604 72.222 0.00 0.00 0.00 6.13
601 639 2.517875 GGCGGTAGTAGAGGCGGA 60.518 66.667 0.00 0.00 0.00 5.54
602 640 2.123428 GGCGGTAGTAGAGGCGGAA 61.123 63.158 0.00 0.00 0.00 4.30
603 641 1.359475 GCGGTAGTAGAGGCGGAAG 59.641 63.158 0.00 0.00 0.00 3.46
604 642 1.382692 GCGGTAGTAGAGGCGGAAGT 61.383 60.000 0.00 0.00 0.00 3.01
605 643 1.959042 CGGTAGTAGAGGCGGAAGTA 58.041 55.000 0.00 0.00 0.00 2.24
606 644 1.601430 CGGTAGTAGAGGCGGAAGTAC 59.399 57.143 0.00 0.00 0.00 2.73
607 645 2.744494 CGGTAGTAGAGGCGGAAGTACT 60.744 54.545 0.00 0.00 0.00 2.73
608 646 2.617774 GGTAGTAGAGGCGGAAGTACTG 59.382 54.545 0.00 0.00 0.00 2.74
619 657 4.336532 CGGAAGTACTGCAAAATGGTAC 57.663 45.455 2.51 5.32 36.89 3.34
620 658 4.000988 CGGAAGTACTGCAAAATGGTACT 58.999 43.478 9.30 9.30 45.16 2.73
621 659 5.172934 CGGAAGTACTGCAAAATGGTACTA 58.827 41.667 14.09 0.00 43.30 1.82
622 660 5.063060 CGGAAGTACTGCAAAATGGTACTAC 59.937 44.000 14.09 10.28 43.30 2.73
623 661 6.171213 GGAAGTACTGCAAAATGGTACTACT 58.829 40.000 14.09 2.58 43.30 2.57
624 662 6.092259 GGAAGTACTGCAAAATGGTACTACTG 59.908 42.308 14.09 0.00 43.30 2.74
625 663 4.935808 AGTACTGCAAAATGGTACTACTGC 59.064 41.667 12.57 0.00 42.61 4.40
626 664 4.021102 ACTGCAAAATGGTACTACTGCT 57.979 40.909 10.00 0.00 0.00 4.24
627 665 4.003648 ACTGCAAAATGGTACTACTGCTC 58.996 43.478 10.00 0.00 0.00 4.26
628 666 4.256920 CTGCAAAATGGTACTACTGCTCT 58.743 43.478 10.00 0.00 0.00 4.09
629 667 5.046591 ACTGCAAAATGGTACTACTGCTCTA 60.047 40.000 10.00 0.00 0.00 2.43
630 668 5.175859 TGCAAAATGGTACTACTGCTCTAC 58.824 41.667 10.00 0.00 0.00 2.59
631 669 5.046591 TGCAAAATGGTACTACTGCTCTACT 60.047 40.000 10.00 0.00 0.00 2.57
632 670 5.875359 GCAAAATGGTACTACTGCTCTACTT 59.125 40.000 0.00 0.00 0.00 2.24
633 671 6.036191 GCAAAATGGTACTACTGCTCTACTTC 59.964 42.308 0.00 0.00 0.00 3.01
634 672 7.324178 CAAAATGGTACTACTGCTCTACTTCT 58.676 38.462 0.00 0.00 0.00 2.85
635 673 6.458232 AATGGTACTACTGCTCTACTTCTG 57.542 41.667 0.00 0.00 0.00 3.02
636 674 3.695060 TGGTACTACTGCTCTACTTCTGC 59.305 47.826 0.00 0.00 0.00 4.26
637 675 3.949113 GGTACTACTGCTCTACTTCTGCT 59.051 47.826 0.00 0.00 0.00 4.24
638 676 4.035909 GGTACTACTGCTCTACTTCTGCTC 59.964 50.000 0.00 0.00 0.00 4.26
639 677 3.691575 ACTACTGCTCTACTTCTGCTCA 58.308 45.455 0.00 0.00 0.00 4.26
640 678 4.082845 ACTACTGCTCTACTTCTGCTCAA 58.917 43.478 0.00 0.00 0.00 3.02
641 679 3.311486 ACTGCTCTACTTCTGCTCAAC 57.689 47.619 0.00 0.00 0.00 3.18
642 680 2.896685 ACTGCTCTACTTCTGCTCAACT 59.103 45.455 0.00 0.00 0.00 3.16
643 681 4.082845 ACTGCTCTACTTCTGCTCAACTA 58.917 43.478 0.00 0.00 0.00 2.24
644 682 4.082463 ACTGCTCTACTTCTGCTCAACTAC 60.082 45.833 0.00 0.00 0.00 2.73
645 683 3.193691 TGCTCTACTTCTGCTCAACTACC 59.806 47.826 0.00 0.00 0.00 3.18
646 684 3.732471 GCTCTACTTCTGCTCAACTACCG 60.732 52.174 0.00 0.00 0.00 4.02
647 685 2.163815 TCTACTTCTGCTCAACTACCGC 59.836 50.000 0.00 0.00 0.00 5.68
648 686 0.969894 ACTTCTGCTCAACTACCGCT 59.030 50.000 0.00 0.00 0.00 5.52
649 687 1.337260 ACTTCTGCTCAACTACCGCTG 60.337 52.381 0.00 0.00 0.00 5.18
650 688 0.966179 TTCTGCTCAACTACCGCTGA 59.034 50.000 0.00 0.00 0.00 4.26
651 689 0.528017 TCTGCTCAACTACCGCTGAG 59.472 55.000 0.00 0.00 41.71 3.35
665 703 4.435436 TGAGCGCGTCGAGCCAAT 62.435 61.111 17.64 0.00 44.76 3.16
666 704 3.621394 GAGCGCGTCGAGCCAATC 61.621 66.667 17.64 5.16 44.76 2.67
667 705 4.435436 AGCGCGTCGAGCCAATCA 62.435 61.111 17.64 0.00 44.76 2.57
668 706 3.918220 GCGCGTCGAGCCAATCAG 61.918 66.667 10.08 0.00 44.76 2.90
669 707 2.202610 CGCGTCGAGCCAATCAGA 60.203 61.111 0.00 0.00 44.76 3.27
670 708 1.805539 CGCGTCGAGCCAATCAGAA 60.806 57.895 0.00 0.00 44.76 3.02
671 709 1.710339 GCGTCGAGCCAATCAGAAC 59.290 57.895 0.00 0.00 40.81 3.01
672 710 1.991430 CGTCGAGCCAATCAGAACG 59.009 57.895 0.00 0.00 0.00 3.95
673 711 1.710339 GTCGAGCCAATCAGAACGC 59.290 57.895 0.00 0.00 0.00 4.84
674 712 1.447838 TCGAGCCAATCAGAACGCC 60.448 57.895 0.00 0.00 0.00 5.68
675 713 1.448540 CGAGCCAATCAGAACGCCT 60.449 57.895 0.00 0.00 0.00 5.52
676 714 1.424493 CGAGCCAATCAGAACGCCTC 61.424 60.000 0.00 0.00 0.00 4.70
677 715 0.391661 GAGCCAATCAGAACGCCTCA 60.392 55.000 0.00 0.00 0.00 3.86
678 716 0.036732 AGCCAATCAGAACGCCTCAA 59.963 50.000 0.00 0.00 0.00 3.02
679 717 0.881118 GCCAATCAGAACGCCTCAAA 59.119 50.000 0.00 0.00 0.00 2.69
680 718 1.269448 GCCAATCAGAACGCCTCAAAA 59.731 47.619 0.00 0.00 0.00 2.44
681 719 2.288152 GCCAATCAGAACGCCTCAAAAA 60.288 45.455 0.00 0.00 0.00 1.94
682 720 3.568538 CCAATCAGAACGCCTCAAAAAG 58.431 45.455 0.00 0.00 0.00 2.27
683 721 3.004734 CCAATCAGAACGCCTCAAAAAGT 59.995 43.478 0.00 0.00 0.00 2.66
684 722 4.499696 CCAATCAGAACGCCTCAAAAAGTT 60.500 41.667 0.00 0.00 0.00 2.66
685 723 3.963383 TCAGAACGCCTCAAAAAGTTC 57.037 42.857 0.00 0.00 42.17 3.01
686 724 2.286833 TCAGAACGCCTCAAAAAGTTCG 59.713 45.455 2.19 0.00 45.27 3.95
687 725 2.031683 CAGAACGCCTCAAAAAGTTCGT 59.968 45.455 2.19 0.00 45.27 3.85
688 726 2.681344 AGAACGCCTCAAAAAGTTCGTT 59.319 40.909 0.00 0.00 45.27 3.85
689 727 3.128068 AGAACGCCTCAAAAAGTTCGTTT 59.872 39.130 0.00 0.00 45.27 3.60
690 728 3.060978 ACGCCTCAAAAAGTTCGTTTC 57.939 42.857 0.00 0.00 31.05 2.78
691 729 2.034076 CGCCTCAAAAAGTTCGTTTCG 58.966 47.619 0.00 0.00 0.00 3.46
692 730 2.285950 CGCCTCAAAAAGTTCGTTTCGA 60.286 45.455 0.00 0.00 0.00 3.71
693 731 3.289076 GCCTCAAAAAGTTCGTTTCGAG 58.711 45.455 0.00 0.00 37.14 4.04
694 732 3.242641 GCCTCAAAAAGTTCGTTTCGAGT 60.243 43.478 0.00 0.00 37.14 4.18
695 733 4.515432 CCTCAAAAAGTTCGTTTCGAGTC 58.485 43.478 0.00 0.00 37.14 3.36
696 734 4.270325 CCTCAAAAAGTTCGTTTCGAGTCT 59.730 41.667 0.00 0.00 37.14 3.24
697 735 5.220605 CCTCAAAAAGTTCGTTTCGAGTCTT 60.221 40.000 0.00 0.00 37.14 3.01
698 736 6.173191 TCAAAAAGTTCGTTTCGAGTCTTT 57.827 33.333 13.59 13.59 40.38 2.52
699 737 6.604930 TCAAAAAGTTCGTTTCGAGTCTTTT 58.395 32.000 19.54 19.54 44.35 2.27
700 738 6.739550 TCAAAAAGTTCGTTTCGAGTCTTTTC 59.260 34.615 22.35 3.32 43.21 2.29
701 739 6.418585 AAAAGTTCGTTTCGAGTCTTTTCT 57.581 33.333 19.54 8.94 41.97 2.52
702 740 5.638660 AAGTTCGTTTCGAGTCTTTTCTC 57.361 39.130 0.00 0.00 37.14 2.87
703 741 4.934515 AGTTCGTTTCGAGTCTTTTCTCT 58.065 39.130 0.00 0.00 37.14 3.10
704 742 6.069684 AGTTCGTTTCGAGTCTTTTCTCTA 57.930 37.500 0.00 0.00 37.14 2.43
705 743 6.501781 AGTTCGTTTCGAGTCTTTTCTCTAA 58.498 36.000 0.00 0.00 37.14 2.10
706 744 6.976925 AGTTCGTTTCGAGTCTTTTCTCTAAA 59.023 34.615 0.00 0.00 37.14 1.85
707 745 7.490402 AGTTCGTTTCGAGTCTTTTCTCTAAAA 59.510 33.333 0.00 0.00 37.14 1.52
708 746 7.760131 TCGTTTCGAGTCTTTTCTCTAAAAA 57.240 32.000 0.00 0.00 34.26 1.94
731 769 7.396540 AAAACAGAAGATGTCACAAAAGAGT 57.603 32.000 0.00 0.00 43.00 3.24
732 770 5.998454 ACAGAAGATGTCACAAAAGAGTG 57.002 39.130 0.00 0.00 37.75 3.51
733 771 4.274459 ACAGAAGATGTCACAAAAGAGTGC 59.726 41.667 0.00 0.00 37.75 4.40
734 772 4.274214 CAGAAGATGTCACAAAAGAGTGCA 59.726 41.667 0.00 0.00 39.35 4.57
735 773 4.274459 AGAAGATGTCACAAAAGAGTGCAC 59.726 41.667 9.40 9.40 39.35 4.57
736 774 2.545526 AGATGTCACAAAAGAGTGCACG 59.454 45.455 12.01 0.00 39.35 5.34
737 775 1.732941 TGTCACAAAAGAGTGCACGT 58.267 45.000 12.01 0.00 39.35 4.49
738 776 2.894902 TGTCACAAAAGAGTGCACGTA 58.105 42.857 12.01 0.00 39.35 3.57
739 777 3.263261 TGTCACAAAAGAGTGCACGTAA 58.737 40.909 12.01 0.00 39.35 3.18
740 778 3.874543 TGTCACAAAAGAGTGCACGTAAT 59.125 39.130 12.01 0.00 39.35 1.89
741 779 4.334203 TGTCACAAAAGAGTGCACGTAATT 59.666 37.500 12.01 3.18 39.35 1.40
742 780 4.904154 GTCACAAAAGAGTGCACGTAATTC 59.096 41.667 12.01 2.76 39.35 2.17
743 781 4.572795 TCACAAAAGAGTGCACGTAATTCA 59.427 37.500 12.01 0.00 39.35 2.57
744 782 5.238432 TCACAAAAGAGTGCACGTAATTCAT 59.762 36.000 12.01 0.00 39.35 2.57
745 783 5.914635 CACAAAAGAGTGCACGTAATTCATT 59.085 36.000 12.01 0.00 32.04 2.57
746 784 6.417635 CACAAAAGAGTGCACGTAATTCATTT 59.582 34.615 12.01 5.85 32.04 2.32
747 785 6.636850 ACAAAAGAGTGCACGTAATTCATTTC 59.363 34.615 12.01 0.00 0.00 2.17
748 786 6.560253 AAAGAGTGCACGTAATTCATTTCT 57.440 33.333 12.01 1.42 0.00 2.52
749 787 5.786401 AGAGTGCACGTAATTCATTTCTC 57.214 39.130 12.01 0.00 0.00 2.87
750 788 4.327357 AGAGTGCACGTAATTCATTTCTCG 59.673 41.667 12.01 0.00 0.00 4.04
751 789 3.370978 AGTGCACGTAATTCATTTCTCGG 59.629 43.478 12.01 0.00 0.00 4.63
752 790 3.124636 GTGCACGTAATTCATTTCTCGGT 59.875 43.478 0.00 0.00 0.00 4.69
753 791 3.124466 TGCACGTAATTCATTTCTCGGTG 59.876 43.478 0.00 0.00 0.00 4.94
754 792 3.485216 GCACGTAATTCATTTCTCGGTGG 60.485 47.826 0.00 0.00 0.00 4.61
755 793 3.682858 CACGTAATTCATTTCTCGGTGGT 59.317 43.478 0.00 0.00 0.00 4.16
756 794 3.682858 ACGTAATTCATTTCTCGGTGGTG 59.317 43.478 0.00 0.00 0.00 4.17
757 795 3.063452 CGTAATTCATTTCTCGGTGGTGG 59.937 47.826 0.00 0.00 0.00 4.61
758 796 2.879103 ATTCATTTCTCGGTGGTGGT 57.121 45.000 0.00 0.00 0.00 4.16
759 797 3.992943 ATTCATTTCTCGGTGGTGGTA 57.007 42.857 0.00 0.00 0.00 3.25
760 798 2.754946 TCATTTCTCGGTGGTGGTAC 57.245 50.000 0.00 0.00 0.00 3.34
761 799 1.276989 TCATTTCTCGGTGGTGGTACC 59.723 52.381 4.43 4.43 39.22 3.34
771 809 2.554370 TGGTGGTACCACACTTAAGC 57.446 50.000 38.81 23.42 44.79 3.09
772 810 1.072648 TGGTGGTACCACACTTAAGCC 59.927 52.381 38.81 23.40 44.79 4.35
773 811 2.853235 GTGGTACCACACTTAAGCCT 57.147 50.000 35.21 0.00 45.53 4.58
774 812 3.967332 GTGGTACCACACTTAAGCCTA 57.033 47.619 35.21 0.00 45.53 3.93
775 813 3.858247 GTGGTACCACACTTAAGCCTAG 58.142 50.000 35.21 0.00 45.53 3.02
776 814 3.260128 GTGGTACCACACTTAAGCCTAGT 59.740 47.826 35.21 0.00 45.53 2.57
777 815 3.905591 TGGTACCACACTTAAGCCTAGTT 59.094 43.478 11.60 0.00 0.00 2.24
778 816 4.348754 TGGTACCACACTTAAGCCTAGTTT 59.651 41.667 11.60 0.00 0.00 2.66
779 817 5.163174 TGGTACCACACTTAAGCCTAGTTTT 60.163 40.000 11.60 0.00 0.00 2.43
780 818 5.766670 GGTACCACACTTAAGCCTAGTTTTT 59.233 40.000 7.15 0.00 0.00 1.94
822 860 4.630894 TTTTTGAGACACAGCGAACATT 57.369 36.364 0.00 0.00 0.00 2.71
823 861 4.630894 TTTTGAGACACAGCGAACATTT 57.369 36.364 0.00 0.00 0.00 2.32
824 862 4.630894 TTTGAGACACAGCGAACATTTT 57.369 36.364 0.00 0.00 0.00 1.82
825 863 4.630894 TTGAGACACAGCGAACATTTTT 57.369 36.364 0.00 0.00 0.00 1.94
851 889 3.511934 AGGTGAACACTTGAGCCTAGTAG 59.488 47.826 4.96 0.00 0.00 2.57
867 909 0.461516 GTAGTCGTTTAGGCCCAGGC 60.462 60.000 0.00 0.00 41.06 4.85
876 918 1.910580 TAGGCCCAGGCAGTACAAGC 61.911 60.000 11.50 0.00 44.11 4.01
887 934 2.124736 TACAAGCTCATGCGGCCC 60.125 61.111 0.00 0.00 45.42 5.80
893 940 3.204827 CTCATGCGGCCCGGAAAG 61.205 66.667 0.00 0.00 0.00 2.62
901 948 1.303282 GGCCCGGAAAGGAACATCT 59.697 57.895 0.73 0.00 45.00 2.90
963 1010 2.415512 CGAACGCTTCCCCTAAGAAAAG 59.584 50.000 0.00 0.00 37.38 2.27
1071 1120 2.513897 GCGCCCACCACATCTACC 60.514 66.667 0.00 0.00 0.00 3.18
1074 1123 1.449601 GCCCACCACATCTACCACG 60.450 63.158 0.00 0.00 0.00 4.94
1075 1124 1.895020 GCCCACCACATCTACCACGA 61.895 60.000 0.00 0.00 0.00 4.35
1121 1173 1.447838 TCGTCGCTGATTTCCCTGC 60.448 57.895 0.00 0.00 0.00 4.85
1183 1236 1.777101 CGATTCTTGGATCTCTCGGC 58.223 55.000 0.00 0.00 0.00 5.54
1186 1239 2.151502 TTCTTGGATCTCTCGGCTCT 57.848 50.000 0.00 0.00 0.00 4.09
1187 1240 1.686355 TCTTGGATCTCTCGGCTCTC 58.314 55.000 0.00 0.00 0.00 3.20
1188 1241 1.064389 TCTTGGATCTCTCGGCTCTCA 60.064 52.381 0.00 0.00 0.00 3.27
1189 1242 1.337703 CTTGGATCTCTCGGCTCTCAG 59.662 57.143 0.00 0.00 0.00 3.35
1355 1416 2.357517 GTAGATGCCCATCGCCCG 60.358 66.667 2.85 0.00 42.48 6.13
1401 1468 4.889832 CCATATCTTCAGGCAACACTTC 57.110 45.455 0.00 0.00 41.41 3.01
1402 1469 4.264253 CCATATCTTCAGGCAACACTTCA 58.736 43.478 0.00 0.00 41.41 3.02
1403 1470 4.334759 CCATATCTTCAGGCAACACTTCAG 59.665 45.833 0.00 0.00 41.41 3.02
1404 1471 3.498774 ATCTTCAGGCAACACTTCAGT 57.501 42.857 0.00 0.00 41.41 3.41
1405 1472 3.281727 TCTTCAGGCAACACTTCAGTT 57.718 42.857 0.00 0.00 41.41 3.16
1406 1473 3.620488 TCTTCAGGCAACACTTCAGTTT 58.380 40.909 0.00 0.00 41.41 2.66
1407 1474 3.627577 TCTTCAGGCAACACTTCAGTTTC 59.372 43.478 0.00 0.00 41.41 2.78
1408 1475 2.997980 TCAGGCAACACTTCAGTTTCA 58.002 42.857 0.00 0.00 41.41 2.69
1447 1520 4.874396 TGCTCATGTGAAATTGCTCTAGAG 59.126 41.667 15.85 15.85 0.00 2.43
1453 1526 8.097038 TCATGTGAAATTGCTCTAGAGTTTACT 58.903 33.333 20.75 3.78 0.00 2.24
1454 1527 9.371136 CATGTGAAATTGCTCTAGAGTTTACTA 57.629 33.333 20.75 1.99 0.00 1.82
1455 1528 9.944376 ATGTGAAATTGCTCTAGAGTTTACTAA 57.056 29.630 20.75 7.63 0.00 2.24
1456 1529 9.424319 TGTGAAATTGCTCTAGAGTTTACTAAG 57.576 33.333 20.75 0.00 0.00 2.18
1457 1530 8.874816 GTGAAATTGCTCTAGAGTTTACTAAGG 58.125 37.037 20.75 0.00 0.00 2.69
1458 1531 8.041323 TGAAATTGCTCTAGAGTTTACTAAGGG 58.959 37.037 20.75 0.00 0.00 3.95
1459 1532 5.340439 TTGCTCTAGAGTTTACTAAGGGC 57.660 43.478 20.75 8.81 36.56 5.19
1460 1533 3.705072 TGCTCTAGAGTTTACTAAGGGCC 59.295 47.826 20.75 0.00 35.69 5.80
1461 1534 3.069872 GCTCTAGAGTTTACTAAGGGCCC 59.930 52.174 16.46 16.46 32.35 5.80
1462 1535 3.294214 TCTAGAGTTTACTAAGGGCCCG 58.706 50.000 18.44 4.53 0.00 6.13
1463 1536 0.540454 AGAGTTTACTAAGGGCCCGC 59.460 55.000 18.44 0.00 0.00 6.13
1464 1537 0.540454 GAGTTTACTAAGGGCCCGCT 59.460 55.000 18.44 10.79 0.00 5.52
1465 1538 0.989602 AGTTTACTAAGGGCCCGCTT 59.010 50.000 18.44 9.11 0.00 4.68
1466 1539 1.092348 GTTTACTAAGGGCCCGCTTG 58.908 55.000 18.44 11.48 0.00 4.01
1467 1540 0.034863 TTTACTAAGGGCCCGCTTGG 60.035 55.000 18.44 11.11 37.09 3.61
1468 1541 0.910566 TTACTAAGGGCCCGCTTGGA 60.911 55.000 18.44 2.15 35.39 3.53
1469 1542 0.693092 TACTAAGGGCCCGCTTGGAT 60.693 55.000 18.44 1.85 35.39 3.41
1470 1543 1.227383 CTAAGGGCCCGCTTGGATT 59.773 57.895 18.44 5.68 35.39 3.01
1471 1544 0.472471 CTAAGGGCCCGCTTGGATTA 59.528 55.000 18.44 6.68 35.39 1.75
1472 1545 0.472471 TAAGGGCCCGCTTGGATTAG 59.528 55.000 18.44 0.00 35.39 1.73
1473 1546 2.907407 GGGCCCGCTTGGATTAGC 60.907 66.667 5.69 0.00 37.80 3.09
1483 1556 4.686839 GCTTGGATTAGCGTTTTCTCTT 57.313 40.909 0.00 0.00 0.00 2.85
1484 1557 4.406943 GCTTGGATTAGCGTTTTCTCTTG 58.593 43.478 0.00 0.00 0.00 3.02
1485 1558 4.083271 GCTTGGATTAGCGTTTTCTCTTGT 60.083 41.667 0.00 0.00 0.00 3.16
1486 1559 5.121768 GCTTGGATTAGCGTTTTCTCTTGTA 59.878 40.000 0.00 0.00 0.00 2.41
1487 1560 6.183360 GCTTGGATTAGCGTTTTCTCTTGTAT 60.183 38.462 0.00 0.00 0.00 2.29
1488 1561 7.626452 GCTTGGATTAGCGTTTTCTCTTGTATT 60.626 37.037 0.00 0.00 0.00 1.89
1489 1562 7.303634 TGGATTAGCGTTTTCTCTTGTATTC 57.696 36.000 0.00 0.00 0.00 1.75
1490 1563 6.035650 TGGATTAGCGTTTTCTCTTGTATTCG 59.964 38.462 0.00 0.00 0.00 3.34
1491 1564 5.773239 TTAGCGTTTTCTCTTGTATTCGG 57.227 39.130 0.00 0.00 0.00 4.30
1492 1565 2.415512 AGCGTTTTCTCTTGTATTCGGC 59.584 45.455 0.00 0.00 0.00 5.54
1493 1566 2.415512 GCGTTTTCTCTTGTATTCGGCT 59.584 45.455 0.00 0.00 0.00 5.52
1494 1567 3.725010 GCGTTTTCTCTTGTATTCGGCTG 60.725 47.826 0.00 0.00 0.00 4.85
1495 1568 3.181520 CGTTTTCTCTTGTATTCGGCTGG 60.182 47.826 0.00 0.00 0.00 4.85
1496 1569 3.695830 TTTCTCTTGTATTCGGCTGGT 57.304 42.857 0.00 0.00 0.00 4.00
1497 1570 3.695830 TTCTCTTGTATTCGGCTGGTT 57.304 42.857 0.00 0.00 0.00 3.67
1498 1571 2.972625 TCTCTTGTATTCGGCTGGTTG 58.027 47.619 0.00 0.00 0.00 3.77
1499 1572 2.009774 CTCTTGTATTCGGCTGGTTGG 58.990 52.381 0.00 0.00 0.00 3.77
1500 1573 1.349688 TCTTGTATTCGGCTGGTTGGT 59.650 47.619 0.00 0.00 0.00 3.67
1501 1574 1.737793 CTTGTATTCGGCTGGTTGGTC 59.262 52.381 0.00 0.00 0.00 4.02
1502 1575 0.390603 TGTATTCGGCTGGTTGGTCG 60.391 55.000 0.00 0.00 35.48 4.79
1503 1576 0.390735 GTATTCGGCTGGTTGGTCGT 60.391 55.000 0.00 0.00 35.67 4.34
1504 1577 0.322322 TATTCGGCTGGTTGGTCGTT 59.678 50.000 0.00 0.00 35.67 3.85
1505 1578 0.536460 ATTCGGCTGGTTGGTCGTTT 60.536 50.000 0.00 0.00 35.67 3.60
1506 1579 0.748729 TTCGGCTGGTTGGTCGTTTT 60.749 50.000 0.00 0.00 35.67 2.43
1507 1580 1.008995 CGGCTGGTTGGTCGTTTTG 60.009 57.895 0.00 0.00 0.00 2.44
1508 1581 1.720694 CGGCTGGTTGGTCGTTTTGT 61.721 55.000 0.00 0.00 0.00 2.83
1509 1582 0.458260 GGCTGGTTGGTCGTTTTGTT 59.542 50.000 0.00 0.00 0.00 2.83
1510 1583 1.134936 GGCTGGTTGGTCGTTTTGTTT 60.135 47.619 0.00 0.00 0.00 2.83
1511 1584 2.190161 GCTGGTTGGTCGTTTTGTTTC 58.810 47.619 0.00 0.00 0.00 2.78
1512 1585 2.804647 CTGGTTGGTCGTTTTGTTTCC 58.195 47.619 0.00 0.00 0.00 3.13
1513 1586 2.164624 CTGGTTGGTCGTTTTGTTTCCA 59.835 45.455 0.00 0.00 0.00 3.53
1514 1587 2.164624 TGGTTGGTCGTTTTGTTTCCAG 59.835 45.455 0.00 0.00 0.00 3.86
1515 1588 2.480587 GGTTGGTCGTTTTGTTTCCAGG 60.481 50.000 0.00 0.00 0.00 4.45
1516 1589 0.741915 TGGTCGTTTTGTTTCCAGGC 59.258 50.000 0.00 0.00 0.00 4.85
1517 1590 0.317519 GGTCGTTTTGTTTCCAGGCG 60.318 55.000 0.00 0.00 0.00 5.52
1518 1591 0.379316 GTCGTTTTGTTTCCAGGCGT 59.621 50.000 0.00 0.00 0.00 5.68
1519 1592 1.598601 GTCGTTTTGTTTCCAGGCGTA 59.401 47.619 0.00 0.00 0.00 4.42
1520 1593 2.031930 GTCGTTTTGTTTCCAGGCGTAA 59.968 45.455 0.00 0.00 0.00 3.18
1521 1594 2.681848 TCGTTTTGTTTCCAGGCGTAAA 59.318 40.909 0.00 0.00 0.00 2.01
1522 1595 3.128242 TCGTTTTGTTTCCAGGCGTAAAA 59.872 39.130 0.00 0.00 0.00 1.52
1523 1596 4.045783 CGTTTTGTTTCCAGGCGTAAAAT 58.954 39.130 0.00 0.00 0.00 1.82
1524 1597 4.147479 CGTTTTGTTTCCAGGCGTAAAATC 59.853 41.667 0.00 0.00 0.00 2.17
1525 1598 4.920640 TTTGTTTCCAGGCGTAAAATCA 57.079 36.364 0.00 0.00 0.00 2.57
1526 1599 4.497473 TTGTTTCCAGGCGTAAAATCAG 57.503 40.909 0.00 0.00 0.00 2.90
1527 1600 2.227865 TGTTTCCAGGCGTAAAATCAGC 59.772 45.455 0.00 0.00 0.00 4.26
1528 1601 2.488153 GTTTCCAGGCGTAAAATCAGCT 59.512 45.455 0.00 0.00 0.00 4.24
1529 1602 1.737838 TCCAGGCGTAAAATCAGCTG 58.262 50.000 7.63 7.63 0.00 4.24
1530 1603 1.003118 TCCAGGCGTAAAATCAGCTGT 59.997 47.619 14.67 0.00 0.00 4.40
1531 1604 1.131126 CCAGGCGTAAAATCAGCTGTG 59.869 52.381 14.67 0.00 0.00 3.66
1532 1605 2.076100 CAGGCGTAAAATCAGCTGTGA 58.924 47.619 14.67 0.00 37.02 3.58
1533 1606 2.076863 AGGCGTAAAATCAGCTGTGAC 58.923 47.619 14.67 5.04 34.75 3.67
1534 1607 1.130561 GGCGTAAAATCAGCTGTGACC 59.869 52.381 14.67 1.87 34.75 4.02
1535 1608 1.201921 GCGTAAAATCAGCTGTGACCG 60.202 52.381 14.67 10.67 34.75 4.79
1536 1609 1.393539 CGTAAAATCAGCTGTGACCGG 59.606 52.381 14.67 0.00 34.75 5.28
1537 1610 2.423577 GTAAAATCAGCTGTGACCGGT 58.576 47.619 6.92 6.92 34.75 5.28
1538 1611 2.851263 AAAATCAGCTGTGACCGGTA 57.149 45.000 7.34 0.00 34.75 4.02
1539 1612 3.350219 AAAATCAGCTGTGACCGGTAT 57.650 42.857 7.34 0.00 34.75 2.73
1540 1613 3.350219 AAATCAGCTGTGACCGGTATT 57.650 42.857 7.34 0.00 34.75 1.89
1541 1614 3.350219 AATCAGCTGTGACCGGTATTT 57.650 42.857 7.34 0.00 34.75 1.40
1542 1615 2.851263 TCAGCTGTGACCGGTATTTT 57.149 45.000 7.34 0.00 0.00 1.82
1543 1616 3.965379 TCAGCTGTGACCGGTATTTTA 57.035 42.857 7.34 0.00 0.00 1.52
1544 1617 3.592059 TCAGCTGTGACCGGTATTTTAC 58.408 45.455 7.34 2.59 0.00 2.01
1545 1618 3.007074 TCAGCTGTGACCGGTATTTTACA 59.993 43.478 7.34 7.49 0.00 2.41
1546 1619 3.749088 CAGCTGTGACCGGTATTTTACAA 59.251 43.478 7.34 0.00 0.00 2.41
1547 1620 4.000988 AGCTGTGACCGGTATTTTACAAG 58.999 43.478 7.34 2.16 0.00 3.16
1548 1621 3.749609 GCTGTGACCGGTATTTTACAAGT 59.250 43.478 7.34 0.00 0.00 3.16
1549 1622 4.378046 GCTGTGACCGGTATTTTACAAGTG 60.378 45.833 7.34 0.00 0.00 3.16
1550 1623 4.706035 TGTGACCGGTATTTTACAAGTGT 58.294 39.130 7.34 0.00 0.00 3.55
1551 1624 5.851720 TGTGACCGGTATTTTACAAGTGTA 58.148 37.500 7.34 0.00 0.00 2.90
1552 1625 6.286758 TGTGACCGGTATTTTACAAGTGTAA 58.713 36.000 7.34 0.00 38.60 2.41
1553 1626 6.765036 TGTGACCGGTATTTTACAAGTGTAAA 59.235 34.615 7.34 11.65 45.55 2.01
1573 1646 8.770438 TGTAAAATTTTACATCCATTCCAAGC 57.230 30.769 30.77 8.51 45.70 4.01
1574 1647 6.966435 AAAATTTTACATCCATTCCAAGCG 57.034 33.333 0.37 0.00 0.00 4.68
1575 1648 4.654091 ATTTTACATCCATTCCAAGCGG 57.346 40.909 0.00 0.00 0.00 5.52
1576 1649 3.358111 TTTACATCCATTCCAAGCGGA 57.642 42.857 0.00 0.00 40.60 5.54
1577 1650 2.620251 TACATCCATTCCAAGCGGAG 57.380 50.000 0.00 0.00 44.10 4.63
1601 1675 5.626116 GCCTAAGTTTCTGGGATAAACGAGA 60.626 44.000 0.00 0.00 40.86 4.04
1603 1677 6.535508 CCTAAGTTTCTGGGATAAACGAGAAG 59.464 42.308 0.00 0.00 40.86 2.85
1604 1678 4.833390 AGTTTCTGGGATAAACGAGAAGG 58.167 43.478 0.00 0.00 40.86 3.46
1607 1681 3.709587 TCTGGGATAAACGAGAAGGAGT 58.290 45.455 0.00 0.00 0.00 3.85
1609 1683 5.455872 TCTGGGATAAACGAGAAGGAGTAT 58.544 41.667 0.00 0.00 0.00 2.12
1610 1684 5.302059 TCTGGGATAAACGAGAAGGAGTATG 59.698 44.000 0.00 0.00 0.00 2.39
1611 1685 4.344102 TGGGATAAACGAGAAGGAGTATGG 59.656 45.833 0.00 0.00 0.00 2.74
1613 1687 2.295253 AAACGAGAAGGAGTATGGCG 57.705 50.000 0.00 0.00 0.00 5.69
1614 1688 0.460311 AACGAGAAGGAGTATGGCGG 59.540 55.000 0.00 0.00 0.00 6.13
1618 1692 1.883084 GAAGGAGTATGGCGGTGCG 60.883 63.158 0.00 0.00 0.00 5.34
1635 1709 3.428452 GGTGCGCAAGTAGTGACATACTA 60.428 47.826 14.00 0.00 37.54 1.82
1649 1723 4.395231 TGACATACTAGTTCTGGAGTCACG 59.605 45.833 0.00 0.00 30.64 4.35
1654 1728 3.833070 ACTAGTTCTGGAGTCACGGAAAT 59.167 43.478 0.00 7.82 37.48 2.17
1661 1735 3.941483 CTGGAGTCACGGAAATATTTGCT 59.059 43.478 16.43 2.68 0.00 3.91
1662 1736 3.689161 TGGAGTCACGGAAATATTTGCTG 59.311 43.478 16.43 13.17 0.00 4.41
1663 1737 3.065371 GGAGTCACGGAAATATTTGCTGG 59.935 47.826 16.43 9.04 0.00 4.85
1683 1781 3.929094 GGCCATGCCCATATTTAACATG 58.071 45.455 0.00 0.00 44.06 3.21
1702 1800 9.634021 TTAACATGTATTTAACCATATGCCTCA 57.366 29.630 0.00 0.00 0.00 3.86
1703 1801 7.510549 ACATGTATTTAACCATATGCCTCAC 57.489 36.000 0.00 0.00 0.00 3.51
1704 1802 7.290061 ACATGTATTTAACCATATGCCTCACT 58.710 34.615 0.00 0.00 0.00 3.41
1705 1803 7.445402 ACATGTATTTAACCATATGCCTCACTC 59.555 37.037 0.00 0.00 0.00 3.51
1706 1804 7.136822 TGTATTTAACCATATGCCTCACTCT 57.863 36.000 0.00 0.00 0.00 3.24
1707 1805 8.257602 TGTATTTAACCATATGCCTCACTCTA 57.742 34.615 0.00 0.00 0.00 2.43
1708 1806 8.710239 TGTATTTAACCATATGCCTCACTCTAA 58.290 33.333 0.00 0.00 0.00 2.10
1709 1807 9.209175 GTATTTAACCATATGCCTCACTCTAAG 57.791 37.037 0.00 0.00 0.00 2.18
1710 1808 7.432148 TTTAACCATATGCCTCACTCTAAGA 57.568 36.000 0.00 0.00 0.00 2.10
1711 1809 5.957771 AACCATATGCCTCACTCTAAGAA 57.042 39.130 0.00 0.00 0.00 2.52
1712 1810 5.957771 ACCATATGCCTCACTCTAAGAAA 57.042 39.130 0.00 0.00 0.00 2.52
1713 1811 6.313519 ACCATATGCCTCACTCTAAGAAAA 57.686 37.500 0.00 0.00 0.00 2.29
1714 1812 6.721318 ACCATATGCCTCACTCTAAGAAAAA 58.279 36.000 0.00 0.00 0.00 1.94
1743 1841 3.855255 TGAGTCAATCTGGTGGAACAA 57.145 42.857 0.00 0.00 44.16 2.83
1749 1847 6.888105 AGTCAATCTGGTGGAACAAATTTTT 58.112 32.000 0.00 0.00 44.16 1.94
1765 1863 7.840931 ACAAATTTTTCCAAGGGAGATATGTC 58.159 34.615 0.00 0.00 31.21 3.06
1782 1880 7.506114 AGATATGTCGGCAAACTAATTCCTAA 58.494 34.615 0.00 0.00 0.00 2.69
1845 1943 5.240891 TGTTTTTCCATGCAGTTTGTTTCA 58.759 33.333 0.00 0.00 0.00 2.69
1848 1946 3.940209 TCCATGCAGTTTGTTTCATCC 57.060 42.857 0.00 0.00 0.00 3.51
1855 1953 3.003897 GCAGTTTGTTTCATCCGGTACAA 59.996 43.478 0.00 3.19 0.00 2.41
1860 1958 5.776173 TTGTTTCATCCGGTACAATTTGT 57.224 34.783 7.30 7.30 0.00 2.83
1914 2012 6.984474 ACGATTACATGAATCCGACAGTTATT 59.016 34.615 0.00 0.00 40.94 1.40
1949 2049 9.884465 GAAAATCCATATGTATGTAGCAGTTTC 57.116 33.333 1.24 0.00 31.82 2.78
2107 2212 8.375506 TCTTGTATTGTACTTCTGAACCTGAAT 58.624 33.333 0.00 0.00 0.00 2.57
2126 2231 9.793252 ACCTGAATATTCTTTGAAATGATTTCG 57.207 29.630 16.24 0.00 42.55 3.46
2179 2284 4.309933 TGATCGTATGCTTATTGGCTGAG 58.690 43.478 0.00 0.00 0.00 3.35
2261 2366 3.820467 CACAATCTTGGCTACCTTCAACA 59.180 43.478 0.00 0.00 0.00 3.33
2291 2396 7.624549 TGAAATTGAAGCTCTCCAAGTATAGT 58.375 34.615 0.00 0.00 0.00 2.12
2293 2398 8.870075 AAATTGAAGCTCTCCAAGTATAGTTT 57.130 30.769 0.00 0.00 0.00 2.66
2406 2512 4.142609 TGCTATTTGGGTTGCACAAAAA 57.857 36.364 5.21 0.00 40.74 1.94
2408 2514 4.126437 GCTATTTGGGTTGCACAAAAAGT 58.874 39.130 5.21 0.00 40.74 2.66
2410 2516 5.277297 GCTATTTGGGTTGCACAAAAAGTTC 60.277 40.000 5.21 0.00 40.74 3.01
2419 2525 2.535574 GCACAAAAAGTTCTTTCTGCCG 59.464 45.455 0.00 0.00 0.00 5.69
2421 2527 4.732355 GCACAAAAAGTTCTTTCTGCCGTA 60.732 41.667 0.00 0.00 0.00 4.02
2469 2575 5.888161 ACCGCTAATGAGAGAATTGGATTTT 59.112 36.000 0.00 0.00 0.00 1.82
2508 2614 2.562738 GTTTAAAACATGGCTCTGGGCT 59.437 45.455 0.00 0.00 41.46 5.19
2595 2704 9.609346 TTATTTTATACTCTACCTTTGTCAGCC 57.391 33.333 0.00 0.00 0.00 4.85
2596 2705 6.869206 TTTATACTCTACCTTTGTCAGCCT 57.131 37.500 0.00 0.00 0.00 4.58
2639 2756 4.973168 ACCTGTGCTGACTCAAGATTTTA 58.027 39.130 0.00 0.00 0.00 1.52
2642 2759 5.879223 CCTGTGCTGACTCAAGATTTTATCT 59.121 40.000 0.00 0.00 42.61 1.98
2677 2794 7.308049 GCCTTCTTTCCGATATGAGATTTTACC 60.308 40.741 0.00 0.00 0.00 2.85
2712 2829 5.624159 TCTCTGATGTTTCATTTGTCCACT 58.376 37.500 0.00 0.00 0.00 4.00
2834 2951 4.783764 TTCGTCTGAAGAGCAAGATACA 57.216 40.909 0.00 0.00 0.00 2.29
2849 2966 5.220815 GCAAGATACAGAAGAAGCCATGAAG 60.221 44.000 0.00 0.00 0.00 3.02
2851 2968 6.798427 AGATACAGAAGAAGCCATGAAGTA 57.202 37.500 0.00 0.00 0.00 2.24
2900 3023 8.879342 AAGAGATAAAGTTGGATAGTTCATCG 57.121 34.615 0.00 0.00 34.12 3.84
3006 3129 7.017056 AGGTATGCTCTAATATTCTTGCCTTCT 59.983 37.037 0.00 0.00 0.00 2.85
3009 3132 6.835174 TGCTCTAATATTCTTGCCTTCTGAT 58.165 36.000 0.00 0.00 0.00 2.90
3010 3133 7.966812 TGCTCTAATATTCTTGCCTTCTGATA 58.033 34.615 0.00 0.00 0.00 2.15
3012 3135 8.310382 GCTCTAATATTCTTGCCTTCTGATAGA 58.690 37.037 0.00 0.00 0.00 1.98
3025 3148 9.851686 TGCCTTCTGATAGAATTATATTGTGTT 57.148 29.630 0.00 0.00 33.13 3.32
3038 3161 9.678260 AATTATATTGTGTTCTCTCTGCTTTCT 57.322 29.630 0.00 0.00 0.00 2.52
3053 3176 3.449018 TGCTTTCTTAAACTTGGCCAACA 59.551 39.130 16.05 3.24 0.00 3.33
3129 3252 7.595819 TGAACACTATGGTTTTCTTTTGGAT 57.404 32.000 9.19 0.00 34.36 3.41
3186 3309 6.075984 AGATTCGGAGTTATGTACTATGGGT 58.924 40.000 0.00 0.00 37.17 4.51
3265 3388 4.788925 TTATGTGCATTAAGGCTAGGGT 57.211 40.909 13.92 0.00 34.04 4.34
3330 3453 4.660168 ACTCTGGATCAATGCTTTCTGTT 58.340 39.130 0.00 0.00 0.00 3.16
3432 3555 2.512705 GATGGGAGGCTGATCCATTTC 58.487 52.381 12.87 2.04 40.96 2.17
3433 3556 0.552848 TGGGAGGCTGATCCATTTCC 59.447 55.000 0.00 0.00 41.52 3.13
3440 3563 1.869767 GCTGATCCATTTCCTACGCAG 59.130 52.381 0.00 0.00 0.00 5.18
3441 3564 2.487934 CTGATCCATTTCCTACGCAGG 58.512 52.381 0.00 0.00 44.17 4.85
3467 3590 3.373439 CAGAACAGCACTAATTGGAGAGC 59.627 47.826 0.00 0.00 33.68 4.09
3483 3606 0.805322 GAGCAGATGTGGAGCAGTCG 60.805 60.000 0.00 0.00 0.00 4.18
3503 3626 4.025145 GTCGAGTTTCGGACAAGAATTTGT 60.025 41.667 0.00 0.00 43.54 2.83
3519 3642 2.027003 TTGTCGTGTTTCTCCGGTTT 57.973 45.000 0.00 0.00 0.00 3.27
3526 3649 3.367025 CGTGTTTCTCCGGTTTCATAGTC 59.633 47.826 0.00 0.00 0.00 2.59
3570 3693 0.331954 AGCTCCCAGTTCGACTCCTA 59.668 55.000 0.00 0.00 0.00 2.94
3655 4135 7.399245 ACCAAGTGTGTTTTGTACTGTAAAT 57.601 32.000 0.00 0.00 0.00 1.40
3725 4205 9.466497 ACAAGATTCAAATATACCACTTGATGT 57.534 29.630 0.00 1.93 37.49 3.06
3729 4209 9.884465 GATTCAAATATACCACTTGATGTTAGC 57.116 33.333 0.00 0.00 0.00 3.09
3813 4351 0.599728 GACTCCATCTCGGCTGATGC 60.600 60.000 0.00 0.00 41.65 3.91
3821 4359 1.302752 TCGGCTGATGCAACTGCTT 60.303 52.632 21.82 0.00 42.66 3.91
3825 4375 1.269936 GGCTGATGCAACTGCTTTGTT 60.270 47.619 21.82 0.00 42.66 2.83
3839 4389 2.479560 GCTTTGTTCTGCCGAAGTGTTT 60.480 45.455 0.00 0.00 0.00 2.83
3840 4390 2.842208 TTGTTCTGCCGAAGTGTTTG 57.158 45.000 0.00 0.00 0.00 2.93
3875 4425 9.683069 AAATCAAAGATGACAAAACATGTACTC 57.317 29.630 0.00 0.00 44.12 2.59
3883 4433 5.046591 TGACAAAACATGTACTCTAGGAGGG 60.047 44.000 0.00 0.00 44.12 4.30
3926 4479 4.720530 TTTCTTTTTCGAAGTCGTAGCC 57.279 40.909 0.00 0.00 40.80 3.93
3927 4480 3.374220 TCTTTTTCGAAGTCGTAGCCA 57.626 42.857 0.00 0.00 40.80 4.75
3990 4640 7.359514 GCTGCTGCAAGATAGGTTTTTAAAAAG 60.360 37.037 13.58 1.36 39.41 2.27
3996 4646 9.430623 GCAAGATAGGTTTTTAAAAAGGCAATA 57.569 29.630 13.58 3.81 0.00 1.90
4037 4690 6.464530 AGGTTGGTAGGAAGAAAGGTAAAT 57.535 37.500 0.00 0.00 0.00 1.40
4123 4776 6.725834 ACCACAACAAGAATTATGAAAGGGAT 59.274 34.615 0.00 0.00 0.00 3.85
4129 4782 9.981460 AACAAGAATTATGAAAGGGATAGAGTT 57.019 29.630 0.00 0.00 0.00 3.01
4161 4855 1.303074 ACCCAGCAGCTCACATGTG 60.303 57.895 20.18 20.18 0.00 3.21
4184 4878 4.319177 ACAGCAAATCTGACTAGTTCACC 58.681 43.478 0.00 0.00 45.72 4.02
4190 4884 2.730382 TCTGACTAGTTCACCGGCATA 58.270 47.619 0.00 0.00 0.00 3.14
4191 4885 2.426024 TCTGACTAGTTCACCGGCATAC 59.574 50.000 0.00 0.00 0.00 2.39
4336 5038 2.267642 CGGCCCAAACGATCCAGA 59.732 61.111 0.00 0.00 0.00 3.86
4343 5045 1.159285 CAAACGATCCAGAAGCAGCA 58.841 50.000 0.00 0.00 0.00 4.41
4344 5046 1.129998 CAAACGATCCAGAAGCAGCAG 59.870 52.381 0.00 0.00 0.00 4.24
4345 5047 1.023513 AACGATCCAGAAGCAGCAGC 61.024 55.000 0.00 0.00 42.56 5.25
4346 5048 1.449070 CGATCCAGAAGCAGCAGCA 60.449 57.895 3.17 0.00 45.49 4.41
4347 5049 1.022982 CGATCCAGAAGCAGCAGCAA 61.023 55.000 3.17 0.00 45.49 3.91
4348 5050 0.450983 GATCCAGAAGCAGCAGCAAC 59.549 55.000 3.17 0.00 45.49 4.17
4351 5053 3.360340 AGAAGCAGCAGCAACGGC 61.360 61.111 3.17 0.00 45.49 5.68
4411 5113 1.469308 AGAGACACCGATCGACTTGAC 59.531 52.381 18.66 10.70 0.00 3.18
4539 5245 6.319405 TGCTTCATACAACATCATAGCACAAT 59.681 34.615 0.00 0.00 32.94 2.71
4552 5258 9.518906 CATCATAGCACAATAACAAATTAAGCA 57.481 29.630 0.00 0.00 0.00 3.91
4568 5274 3.951775 AAGCAATTTAATCGGGTGCAA 57.048 38.095 0.00 0.00 37.68 4.08
4613 5319 5.470437 GCATGGATTTTACCCTACTAAGCTC 59.530 44.000 0.00 0.00 0.00 4.09
4668 5383 7.428282 AAAGAAACAAAAACAAAACGGTCAT 57.572 28.000 0.00 0.00 0.00 3.06
4684 5399 3.119291 GGTCATCGCTCTGACATTACTG 58.881 50.000 14.94 0.00 45.95 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 4.497291 TGTTACTCTTGGGTGTTTGAGT 57.503 40.909 0.00 0.00 41.81 3.41
104 106 1.840635 GGGCCCAGATCTACACTTTCT 59.159 52.381 19.95 0.00 0.00 2.52
105 107 1.840635 AGGGCCCAGATCTACACTTTC 59.159 52.381 27.56 0.00 0.00 2.62
106 108 1.840635 GAGGGCCCAGATCTACACTTT 59.159 52.381 27.56 0.00 0.00 2.66
118 120 1.152830 GTTTGGTTGAGAGGGCCCA 59.847 57.895 27.56 0.00 0.00 5.36
164 166 1.397672 TCGCTCAATCTCTCTCCCTG 58.602 55.000 0.00 0.00 0.00 4.45
177 179 4.277174 TGTTTAAAGCTCCATTTTCGCTCA 59.723 37.500 0.00 0.00 32.70 4.26
181 183 6.820470 TTGTTGTTTAAAGCTCCATTTTCG 57.180 33.333 0.00 0.00 0.00 3.46
196 198 5.188751 TCTTTCCCAAACTCCATTGTTGTTT 59.811 36.000 0.00 0.00 34.69 2.83
198 200 4.285863 TCTTTCCCAAACTCCATTGTTGT 58.714 39.130 0.00 0.00 0.00 3.32
216 218 6.072452 CCAATAAGACTCGCCTCTTTTTCTTT 60.072 38.462 0.42 0.00 32.54 2.52
222 224 2.838202 TCCCAATAAGACTCGCCTCTTT 59.162 45.455 0.42 0.00 32.54 2.52
223 225 2.467880 TCCCAATAAGACTCGCCTCTT 58.532 47.619 0.81 0.81 34.72 2.85
230 232 5.186942 GGGTCTTCTTTCCCAATAAGACTC 58.813 45.833 12.31 6.18 42.10 3.36
237 239 1.773541 AGGGGGTCTTCTTTCCCAAT 58.226 50.000 0.00 0.00 45.06 3.16
243 245 7.072581 CCTCACTATAAATAGGGGGTCTTCTTT 59.927 40.741 0.00 0.00 32.19 2.52
259 261 5.046159 ACGGTTGGATTTGTCCTCACTATAA 60.046 40.000 0.00 0.00 0.00 0.98
292 294 1.713937 CGCTTGTGTGCAGGTTGTGA 61.714 55.000 0.00 0.00 0.00 3.58
297 299 1.597027 GTACCGCTTGTGTGCAGGT 60.597 57.895 0.00 0.00 40.67 4.00
300 302 0.320073 GGTAGTACCGCTTGTGTGCA 60.320 55.000 2.90 0.00 0.00 4.57
301 303 2.452767 GGTAGTACCGCTTGTGTGC 58.547 57.895 2.90 0.00 0.00 4.57
324 346 4.827284 CACTGTGTTTTGGAACTATCCCTT 59.173 41.667 0.00 0.00 45.95 3.95
325 347 4.398319 CACTGTGTTTTGGAACTATCCCT 58.602 43.478 0.00 0.00 45.95 4.20
327 349 3.568007 TGCACTGTGTTTTGGAACTATCC 59.432 43.478 9.86 0.00 46.76 2.59
338 360 2.283298 CTCTGTCTGTGCACTGTGTTT 58.717 47.619 19.41 0.00 0.00 2.83
348 370 1.080230 CTCGGGTGCTCTGTCTGTG 60.080 63.158 0.00 0.00 0.00 3.66
377 401 2.412112 GGTAGTACTGCTCCGGCG 59.588 66.667 10.95 0.00 42.25 6.46
415 442 2.434336 CCTATACACTGCACCCTAAGCA 59.566 50.000 0.00 0.00 40.19 3.91
452 479 2.579873 ACTACCGTCGTACATATGCCT 58.420 47.619 1.58 0.00 0.00 4.75
455 482 6.052840 AGTTGTACTACCGTCGTACATATG 57.947 41.667 14.76 0.00 44.55 1.78
456 483 6.683974 AAGTTGTACTACCGTCGTACATAT 57.316 37.500 14.76 6.11 44.55 1.78
457 484 7.786178 ATAAGTTGTACTACCGTCGTACATA 57.214 36.000 14.76 7.08 44.55 2.29
459 486 7.603963 TTATAAGTTGTACTACCGTCGTACA 57.396 36.000 11.04 11.04 43.79 2.90
463 490 4.667948 CGCTTATAAGTTGTACTACCGTCG 59.332 45.833 13.91 0.86 0.00 5.12
465 492 4.399303 ACCGCTTATAAGTTGTACTACCGT 59.601 41.667 13.91 0.00 0.00 4.83
507 545 1.080974 CTCGTTTACCACTCCGCGT 60.081 57.895 4.92 0.00 0.00 6.01
538 576 4.585162 AGCTCAGTCACTACCGCTTATATT 59.415 41.667 0.00 0.00 0.00 1.28
554 592 2.996621 GCAGATTTCGTTGTAGCTCAGT 59.003 45.455 0.00 0.00 0.00 3.41
555 593 2.028523 CGCAGATTTCGTTGTAGCTCAG 59.971 50.000 0.00 0.00 0.00 3.35
556 594 1.992667 CGCAGATTTCGTTGTAGCTCA 59.007 47.619 0.00 0.00 0.00 4.26
557 595 2.259618 TCGCAGATTTCGTTGTAGCTC 58.740 47.619 0.00 0.00 0.00 4.09
558 596 2.363788 TCGCAGATTTCGTTGTAGCT 57.636 45.000 0.00 0.00 0.00 3.32
559 597 3.120649 ACTTTCGCAGATTTCGTTGTAGC 60.121 43.478 0.00 0.00 35.04 3.58
560 598 4.386230 CACTTTCGCAGATTTCGTTGTAG 58.614 43.478 0.00 0.00 35.04 2.74
561 599 3.185594 CCACTTTCGCAGATTTCGTTGTA 59.814 43.478 0.00 0.00 35.04 2.41
562 600 2.032030 CCACTTTCGCAGATTTCGTTGT 60.032 45.455 0.00 0.00 35.04 3.32
563 601 2.574322 CCACTTTCGCAGATTTCGTTG 58.426 47.619 0.00 0.00 35.04 4.10
564 602 1.535462 CCCACTTTCGCAGATTTCGTT 59.465 47.619 0.00 0.00 35.04 3.85
565 603 1.156736 CCCACTTTCGCAGATTTCGT 58.843 50.000 0.00 0.00 35.04 3.85
566 604 0.447801 CCCCACTTTCGCAGATTTCG 59.552 55.000 0.00 0.00 35.04 3.46
567 605 0.171231 GCCCCACTTTCGCAGATTTC 59.829 55.000 0.00 0.00 35.04 2.17
568 606 1.586154 CGCCCCACTTTCGCAGATTT 61.586 55.000 0.00 0.00 35.04 2.17
569 607 2.040544 CGCCCCACTTTCGCAGATT 61.041 57.895 0.00 0.00 35.04 2.40
570 608 2.436646 CGCCCCACTTTCGCAGAT 60.437 61.111 0.00 0.00 35.04 2.90
571 609 4.697756 CCGCCCCACTTTCGCAGA 62.698 66.667 0.00 0.00 0.00 4.26
572 610 3.599285 TACCGCCCCACTTTCGCAG 62.599 63.158 0.00 0.00 0.00 5.18
573 611 3.599285 CTACCGCCCCACTTTCGCA 62.599 63.158 0.00 0.00 0.00 5.10
574 612 2.229690 TACTACCGCCCCACTTTCGC 62.230 60.000 0.00 0.00 0.00 4.70
575 613 0.179119 CTACTACCGCCCCACTTTCG 60.179 60.000 0.00 0.00 0.00 3.46
576 614 1.136500 CTCTACTACCGCCCCACTTTC 59.864 57.143 0.00 0.00 0.00 2.62
577 615 1.192428 CTCTACTACCGCCCCACTTT 58.808 55.000 0.00 0.00 0.00 2.66
578 616 0.686769 CCTCTACTACCGCCCCACTT 60.687 60.000 0.00 0.00 0.00 3.16
579 617 1.076192 CCTCTACTACCGCCCCACT 60.076 63.158 0.00 0.00 0.00 4.00
580 618 2.794028 GCCTCTACTACCGCCCCAC 61.794 68.421 0.00 0.00 0.00 4.61
581 619 2.443390 GCCTCTACTACCGCCCCA 60.443 66.667 0.00 0.00 0.00 4.96
582 620 3.603671 CGCCTCTACTACCGCCCC 61.604 72.222 0.00 0.00 0.00 5.80
583 621 3.603671 CCGCCTCTACTACCGCCC 61.604 72.222 0.00 0.00 0.00 6.13
584 622 2.073037 CTTCCGCCTCTACTACCGCC 62.073 65.000 0.00 0.00 0.00 6.13
585 623 1.359475 CTTCCGCCTCTACTACCGC 59.641 63.158 0.00 0.00 0.00 5.68
586 624 1.601430 GTACTTCCGCCTCTACTACCG 59.399 57.143 0.00 0.00 0.00 4.02
587 625 2.617774 CAGTACTTCCGCCTCTACTACC 59.382 54.545 0.00 0.00 0.00 3.18
588 626 2.033174 GCAGTACTTCCGCCTCTACTAC 59.967 54.545 0.00 0.00 0.00 2.73
589 627 2.295885 GCAGTACTTCCGCCTCTACTA 58.704 52.381 0.00 0.00 0.00 1.82
590 628 1.104630 GCAGTACTTCCGCCTCTACT 58.895 55.000 0.00 0.00 0.00 2.57
591 629 0.815734 TGCAGTACTTCCGCCTCTAC 59.184 55.000 0.00 0.00 0.00 2.59
592 630 1.552578 TTGCAGTACTTCCGCCTCTA 58.447 50.000 0.00 0.00 0.00 2.43
593 631 0.685097 TTTGCAGTACTTCCGCCTCT 59.315 50.000 0.00 0.00 0.00 3.69
594 632 1.519408 TTTTGCAGTACTTCCGCCTC 58.481 50.000 0.00 0.00 0.00 4.70
595 633 1.812571 CATTTTGCAGTACTTCCGCCT 59.187 47.619 0.00 0.00 0.00 5.52
596 634 1.135402 CCATTTTGCAGTACTTCCGCC 60.135 52.381 0.00 0.00 0.00 6.13
597 635 1.539827 ACCATTTTGCAGTACTTCCGC 59.460 47.619 0.00 0.00 0.00 5.54
598 636 4.000988 AGTACCATTTTGCAGTACTTCCG 58.999 43.478 9.30 0.00 43.11 4.30
599 637 6.092259 CAGTAGTACCATTTTGCAGTACTTCC 59.908 42.308 17.68 10.83 43.11 3.46
600 638 6.402226 GCAGTAGTACCATTTTGCAGTACTTC 60.402 42.308 17.68 13.70 43.11 3.01
601 639 5.411669 GCAGTAGTACCATTTTGCAGTACTT 59.588 40.000 17.68 2.35 43.11 2.24
602 640 4.935808 GCAGTAGTACCATTTTGCAGTACT 59.064 41.667 16.92 16.92 46.34 2.73
603 641 4.935808 AGCAGTAGTACCATTTTGCAGTAC 59.064 41.667 12.41 5.32 37.27 2.73
604 642 5.046591 AGAGCAGTAGTACCATTTTGCAGTA 60.047 40.000 12.41 0.00 34.17 2.74
605 643 4.003648 GAGCAGTAGTACCATTTTGCAGT 58.996 43.478 12.41 0.00 34.17 4.40
606 644 4.256920 AGAGCAGTAGTACCATTTTGCAG 58.743 43.478 12.41 0.00 34.17 4.41
607 645 4.286297 AGAGCAGTAGTACCATTTTGCA 57.714 40.909 12.41 0.00 34.17 4.08
608 646 5.420409 AGTAGAGCAGTAGTACCATTTTGC 58.580 41.667 3.84 3.84 0.00 3.68
609 647 7.276658 CAGAAGTAGAGCAGTAGTACCATTTTG 59.723 40.741 0.00 0.00 0.00 2.44
610 648 7.324178 CAGAAGTAGAGCAGTAGTACCATTTT 58.676 38.462 0.00 0.00 0.00 1.82
611 649 6.628398 GCAGAAGTAGAGCAGTAGTACCATTT 60.628 42.308 0.00 0.00 0.00 2.32
612 650 5.163499 GCAGAAGTAGAGCAGTAGTACCATT 60.163 44.000 0.00 0.00 0.00 3.16
613 651 4.339814 GCAGAAGTAGAGCAGTAGTACCAT 59.660 45.833 0.00 0.00 0.00 3.55
614 652 3.695060 GCAGAAGTAGAGCAGTAGTACCA 59.305 47.826 0.00 0.00 0.00 3.25
615 653 3.949113 AGCAGAAGTAGAGCAGTAGTACC 59.051 47.826 0.00 0.00 0.00 3.34
616 654 4.636648 TGAGCAGAAGTAGAGCAGTAGTAC 59.363 45.833 0.00 0.00 0.00 2.73
617 655 4.844884 TGAGCAGAAGTAGAGCAGTAGTA 58.155 43.478 0.00 0.00 0.00 1.82
618 656 3.691575 TGAGCAGAAGTAGAGCAGTAGT 58.308 45.455 0.00 0.00 0.00 2.73
619 657 4.157656 AGTTGAGCAGAAGTAGAGCAGTAG 59.842 45.833 0.00 0.00 0.00 2.57
620 658 4.082845 AGTTGAGCAGAAGTAGAGCAGTA 58.917 43.478 0.00 0.00 0.00 2.74
621 659 2.896685 AGTTGAGCAGAAGTAGAGCAGT 59.103 45.455 0.00 0.00 0.00 4.40
622 660 3.591196 AGTTGAGCAGAAGTAGAGCAG 57.409 47.619 0.00 0.00 0.00 4.24
623 661 3.193691 GGTAGTTGAGCAGAAGTAGAGCA 59.806 47.826 0.00 0.00 0.00 4.26
624 662 3.732471 CGGTAGTTGAGCAGAAGTAGAGC 60.732 52.174 0.00 0.00 0.00 4.09
625 663 3.732471 GCGGTAGTTGAGCAGAAGTAGAG 60.732 52.174 0.00 0.00 0.00 2.43
626 664 2.163815 GCGGTAGTTGAGCAGAAGTAGA 59.836 50.000 0.00 0.00 0.00 2.59
627 665 2.164624 AGCGGTAGTTGAGCAGAAGTAG 59.835 50.000 0.00 0.00 0.00 2.57
628 666 2.094700 CAGCGGTAGTTGAGCAGAAGTA 60.095 50.000 0.00 0.00 0.00 2.24
629 667 0.969894 AGCGGTAGTTGAGCAGAAGT 59.030 50.000 0.00 0.00 0.00 3.01
630 668 1.067565 TCAGCGGTAGTTGAGCAGAAG 60.068 52.381 0.00 0.00 32.57 2.85
631 669 0.966179 TCAGCGGTAGTTGAGCAGAA 59.034 50.000 0.00 0.00 32.57 3.02
632 670 0.528017 CTCAGCGGTAGTTGAGCAGA 59.472 55.000 0.00 0.00 46.01 4.26
633 671 3.041874 CTCAGCGGTAGTTGAGCAG 57.958 57.895 0.00 0.00 46.01 4.24
648 686 4.435436 ATTGGCTCGACGCGCTCA 62.435 61.111 5.73 3.48 40.44 4.26
649 687 3.621394 GATTGGCTCGACGCGCTC 61.621 66.667 5.73 1.80 40.44 5.03
650 688 4.435436 TGATTGGCTCGACGCGCT 62.435 61.111 5.73 0.00 40.44 5.92
651 689 3.918220 CTGATTGGCTCGACGCGC 61.918 66.667 5.73 0.07 40.44 6.86
652 690 1.805539 TTCTGATTGGCTCGACGCG 60.806 57.895 3.53 3.53 40.44 6.01
653 691 1.710339 GTTCTGATTGGCTCGACGC 59.290 57.895 0.00 0.00 38.13 5.19
654 692 1.991430 CGTTCTGATTGGCTCGACG 59.009 57.895 0.00 0.00 0.00 5.12
655 693 1.696832 GGCGTTCTGATTGGCTCGAC 61.697 60.000 0.00 0.00 0.00 4.20
656 694 1.447838 GGCGTTCTGATTGGCTCGA 60.448 57.895 0.00 0.00 0.00 4.04
657 695 1.424493 GAGGCGTTCTGATTGGCTCG 61.424 60.000 14.40 0.00 43.91 5.03
658 696 2.388347 GAGGCGTTCTGATTGGCTC 58.612 57.895 14.40 14.40 46.03 4.70
659 697 0.036732 TTGAGGCGTTCTGATTGGCT 59.963 50.000 5.59 5.59 41.69 4.75
660 698 0.881118 TTTGAGGCGTTCTGATTGGC 59.119 50.000 0.00 0.00 0.00 4.52
661 699 3.004734 ACTTTTTGAGGCGTTCTGATTGG 59.995 43.478 0.00 0.00 0.00 3.16
662 700 4.228912 ACTTTTTGAGGCGTTCTGATTG 57.771 40.909 0.00 0.00 0.00 2.67
663 701 4.554723 CGAACTTTTTGAGGCGTTCTGATT 60.555 41.667 0.00 0.00 34.98 2.57
664 702 3.058914 CGAACTTTTTGAGGCGTTCTGAT 60.059 43.478 0.00 0.00 34.98 2.90
665 703 2.286833 CGAACTTTTTGAGGCGTTCTGA 59.713 45.455 0.00 0.00 34.98 3.27
666 704 2.031683 ACGAACTTTTTGAGGCGTTCTG 59.968 45.455 0.00 0.00 37.25 3.02
667 705 2.285977 ACGAACTTTTTGAGGCGTTCT 58.714 42.857 0.00 0.00 37.25 3.01
668 706 2.750301 ACGAACTTTTTGAGGCGTTC 57.250 45.000 0.00 0.00 37.25 3.95
669 707 3.431856 GAAACGAACTTTTTGAGGCGTT 58.568 40.909 0.00 0.00 45.76 4.84
670 708 2.538132 CGAAACGAACTTTTTGAGGCGT 60.538 45.455 0.00 0.00 40.59 5.68
671 709 2.034076 CGAAACGAACTTTTTGAGGCG 58.966 47.619 0.00 0.00 34.67 5.52
672 710 3.242641 ACTCGAAACGAACTTTTTGAGGC 60.243 43.478 18.49 0.00 45.70 4.70
673 711 4.270325 AGACTCGAAACGAACTTTTTGAGG 59.730 41.667 18.49 7.13 45.70 3.86
674 712 5.391060 AGACTCGAAACGAACTTTTTGAG 57.609 39.130 15.00 15.00 46.38 3.02
675 713 5.789710 AAGACTCGAAACGAACTTTTTGA 57.210 34.783 0.00 0.00 34.74 2.69
676 714 6.741358 AGAAAAGACTCGAAACGAACTTTTTG 59.259 34.615 23.60 2.16 43.97 2.44
677 715 6.839033 AGAAAAGACTCGAAACGAACTTTTT 58.161 32.000 23.60 16.55 43.97 1.94
678 716 6.313164 AGAGAAAAGACTCGAAACGAACTTTT 59.687 34.615 23.31 23.31 45.12 2.27
679 717 5.811100 AGAGAAAAGACTCGAAACGAACTTT 59.189 36.000 14.59 14.59 40.80 2.66
680 718 5.349809 AGAGAAAAGACTCGAAACGAACTT 58.650 37.500 0.00 0.00 41.25 2.66
681 719 4.934515 AGAGAAAAGACTCGAAACGAACT 58.065 39.130 0.00 0.00 41.25 3.01
682 720 6.744550 TTAGAGAAAAGACTCGAAACGAAC 57.255 37.500 0.00 0.00 41.25 3.95
683 721 7.760131 TTTTAGAGAAAAGACTCGAAACGAA 57.240 32.000 0.00 0.00 39.68 3.85
684 722 7.760131 TTTTTAGAGAAAAGACTCGAAACGA 57.240 32.000 0.00 0.00 39.68 3.85
706 744 7.756722 CACTCTTTTGTGACATCTTCTGTTTTT 59.243 33.333 0.00 0.00 38.54 1.94
707 745 7.253422 CACTCTTTTGTGACATCTTCTGTTTT 58.747 34.615 0.00 0.00 38.54 2.43
708 746 6.678900 GCACTCTTTTGTGACATCTTCTGTTT 60.679 38.462 0.00 0.00 38.54 2.83
709 747 5.220931 GCACTCTTTTGTGACATCTTCTGTT 60.221 40.000 0.00 0.00 38.54 3.16
710 748 4.274459 GCACTCTTTTGTGACATCTTCTGT 59.726 41.667 0.00 0.00 42.15 3.41
711 749 4.274214 TGCACTCTTTTGTGACATCTTCTG 59.726 41.667 0.00 0.00 40.12 3.02
712 750 4.274459 GTGCACTCTTTTGTGACATCTTCT 59.726 41.667 10.32 0.00 40.12 2.85
713 751 4.531332 GTGCACTCTTTTGTGACATCTTC 58.469 43.478 10.32 0.00 40.12 2.87
714 752 3.002656 CGTGCACTCTTTTGTGACATCTT 59.997 43.478 16.19 0.00 40.12 2.40
715 753 2.545526 CGTGCACTCTTTTGTGACATCT 59.454 45.455 16.19 0.00 40.12 2.90
716 754 2.287915 ACGTGCACTCTTTTGTGACATC 59.712 45.455 16.19 0.00 40.12 3.06
717 755 2.288666 ACGTGCACTCTTTTGTGACAT 58.711 42.857 16.19 0.00 40.12 3.06
718 756 1.732941 ACGTGCACTCTTTTGTGACA 58.267 45.000 16.19 0.00 40.12 3.58
719 757 3.936902 TTACGTGCACTCTTTTGTGAC 57.063 42.857 16.19 0.00 40.12 3.67
720 758 4.572795 TGAATTACGTGCACTCTTTTGTGA 59.427 37.500 16.19 1.12 40.12 3.58
721 759 4.843147 TGAATTACGTGCACTCTTTTGTG 58.157 39.130 16.19 0.00 40.62 3.33
722 760 5.689383 ATGAATTACGTGCACTCTTTTGT 57.311 34.783 16.19 6.66 0.00 2.83
723 761 6.857964 AGAAATGAATTACGTGCACTCTTTTG 59.142 34.615 16.19 0.00 0.00 2.44
724 762 6.970484 AGAAATGAATTACGTGCACTCTTTT 58.030 32.000 16.19 14.43 0.00 2.27
725 763 6.560253 AGAAATGAATTACGTGCACTCTTT 57.440 33.333 16.19 6.80 0.00 2.52
726 764 5.163953 CGAGAAATGAATTACGTGCACTCTT 60.164 40.000 16.19 2.55 0.00 2.85
727 765 4.327357 CGAGAAATGAATTACGTGCACTCT 59.673 41.667 16.19 6.45 0.00 3.24
728 766 4.492570 CCGAGAAATGAATTACGTGCACTC 60.493 45.833 16.19 5.65 0.00 3.51
729 767 3.370978 CCGAGAAATGAATTACGTGCACT 59.629 43.478 16.19 4.64 0.00 4.40
730 768 3.124636 ACCGAGAAATGAATTACGTGCAC 59.875 43.478 6.82 6.82 0.00 4.57
731 769 3.124466 CACCGAGAAATGAATTACGTGCA 59.876 43.478 0.00 0.00 0.00 4.57
732 770 3.485216 CCACCGAGAAATGAATTACGTGC 60.485 47.826 0.00 0.00 0.00 5.34
733 771 3.682858 ACCACCGAGAAATGAATTACGTG 59.317 43.478 0.00 0.00 0.00 4.49
734 772 3.682858 CACCACCGAGAAATGAATTACGT 59.317 43.478 0.00 0.00 0.00 3.57
735 773 3.063452 CCACCACCGAGAAATGAATTACG 59.937 47.826 0.00 0.00 0.00 3.18
736 774 4.007659 ACCACCACCGAGAAATGAATTAC 58.992 43.478 0.00 0.00 0.00 1.89
737 775 4.295141 ACCACCACCGAGAAATGAATTA 57.705 40.909 0.00 0.00 0.00 1.40
738 776 3.154827 ACCACCACCGAGAAATGAATT 57.845 42.857 0.00 0.00 0.00 2.17
739 777 2.879103 ACCACCACCGAGAAATGAAT 57.121 45.000 0.00 0.00 0.00 2.57
740 778 2.289819 GGTACCACCACCGAGAAATGAA 60.290 50.000 7.15 0.00 38.42 2.57
741 779 1.276989 GGTACCACCACCGAGAAATGA 59.723 52.381 7.15 0.00 38.42 2.57
742 780 1.002659 TGGTACCACCACCGAGAAATG 59.997 52.381 11.60 0.00 44.79 2.32
743 781 1.354101 TGGTACCACCACCGAGAAAT 58.646 50.000 11.60 0.00 44.79 2.17
744 782 2.837411 TGGTACCACCACCGAGAAA 58.163 52.632 11.60 0.00 44.79 2.52
745 783 4.623308 TGGTACCACCACCGAGAA 57.377 55.556 11.60 0.00 44.79 2.87
753 791 1.350019 AGGCTTAAGTGTGGTACCACC 59.650 52.381 36.26 27.55 45.63 4.61
754 792 2.853235 AGGCTTAAGTGTGGTACCAC 57.147 50.000 33.97 33.97 46.33 4.16
755 793 3.513517 ACTAGGCTTAAGTGTGGTACCA 58.486 45.455 11.60 11.60 0.00 3.25
756 794 4.548451 AACTAGGCTTAAGTGTGGTACC 57.452 45.455 4.43 4.43 0.00 3.34
757 795 6.872628 AAAAACTAGGCTTAAGTGTGGTAC 57.127 37.500 4.02 0.00 0.00 3.34
801 839 4.630894 AATGTTCGCTGTGTCTCAAAAA 57.369 36.364 0.00 0.00 0.00 1.94
802 840 4.630894 AAATGTTCGCTGTGTCTCAAAA 57.369 36.364 0.00 0.00 0.00 2.44
803 841 4.630894 AAAATGTTCGCTGTGTCTCAAA 57.369 36.364 0.00 0.00 0.00 2.69
804 842 4.630894 AAAAATGTTCGCTGTGTCTCAA 57.369 36.364 0.00 0.00 0.00 3.02
824 862 4.532834 AGGCTCAAGTGTTCACCTAAAAA 58.467 39.130 0.00 0.00 0.00 1.94
825 863 4.164843 AGGCTCAAGTGTTCACCTAAAA 57.835 40.909 0.00 0.00 0.00 1.52
826 864 3.857157 AGGCTCAAGTGTTCACCTAAA 57.143 42.857 0.00 0.00 0.00 1.85
827 865 3.901844 ACTAGGCTCAAGTGTTCACCTAA 59.098 43.478 0.00 0.00 29.75 2.69
828 866 3.507411 ACTAGGCTCAAGTGTTCACCTA 58.493 45.455 0.00 0.00 0.00 3.08
829 867 2.330216 ACTAGGCTCAAGTGTTCACCT 58.670 47.619 0.00 0.00 0.00 4.00
830 868 2.841442 ACTAGGCTCAAGTGTTCACC 57.159 50.000 0.00 0.00 0.00 4.02
831 869 4.487019 GACTACTAGGCTCAAGTGTTCAC 58.513 47.826 0.00 0.00 0.00 3.18
832 870 3.190744 CGACTACTAGGCTCAAGTGTTCA 59.809 47.826 0.00 0.00 0.00 3.18
836 874 3.851976 AACGACTACTAGGCTCAAGTG 57.148 47.619 0.00 0.00 0.00 3.16
851 889 1.745489 CTGCCTGGGCCTAAACGAC 60.745 63.158 4.53 0.00 41.09 4.34
867 909 1.709147 GGCCGCATGAGCTTGTACTG 61.709 60.000 0.00 0.00 39.10 2.74
876 918 3.204827 CTTTCCGGGCCGCATGAG 61.205 66.667 23.20 11.30 0.00 2.90
887 934 5.449177 GCTGGAAAATAGATGTTCCTTTCCG 60.449 44.000 11.88 4.28 45.28 4.30
893 940 3.631250 TGGGCTGGAAAATAGATGTTCC 58.369 45.455 4.69 4.69 43.15 3.62
936 983 3.053896 GGGAAGCGTTCGGTTGGG 61.054 66.667 14.05 0.00 0.00 4.12
972 1019 2.498726 GGAGAGAGCTTGCTCGGG 59.501 66.667 15.74 0.00 39.87 5.14
1060 1109 1.183549 GAGGTCGTGGTAGATGTGGT 58.816 55.000 0.00 0.00 0.00 4.16
1063 1112 1.685491 GGAGGAGGTCGTGGTAGATGT 60.685 57.143 0.00 0.00 0.00 3.06
1065 1114 0.927767 AGGAGGAGGTCGTGGTAGAT 59.072 55.000 0.00 0.00 0.00 1.98
1071 1120 2.681778 AGGCAGGAGGAGGTCGTG 60.682 66.667 0.00 0.00 42.89 4.35
1074 1123 3.151022 CCGAGGCAGGAGGAGGTC 61.151 72.222 0.00 0.00 0.00 3.85
1155 1208 2.100991 CAAGAATCGCAAGCGGCC 59.899 61.111 14.98 0.00 40.31 6.13
1183 1236 2.093764 AGAAAATCCGTGAGCCTGAGAG 60.094 50.000 0.00 0.00 0.00 3.20
1186 1239 2.859165 AAGAAAATCCGTGAGCCTGA 57.141 45.000 0.00 0.00 0.00 3.86
1187 1240 5.335127 CAATAAAGAAAATCCGTGAGCCTG 58.665 41.667 0.00 0.00 0.00 4.85
1188 1241 4.142381 GCAATAAAGAAAATCCGTGAGCCT 60.142 41.667 0.00 0.00 0.00 4.58
1189 1242 4.105486 GCAATAAAGAAAATCCGTGAGCC 58.895 43.478 0.00 0.00 0.00 4.70
1355 1416 1.006337 CTGGATGCTAGAGAGGCGC 60.006 63.158 0.00 0.00 0.00 6.53
1382 1443 5.171339 ACTGAAGTGTTGCCTGAAGATAT 57.829 39.130 0.00 0.00 0.00 1.63
1398 1459 7.140705 TGTTTTAGTGCATCATGAAACTGAAG 58.859 34.615 15.60 0.00 0.00 3.02
1401 1468 6.183360 GCATGTTTTAGTGCATCATGAAACTG 60.183 38.462 15.60 5.14 40.94 3.16
1402 1469 5.865552 GCATGTTTTAGTGCATCATGAAACT 59.134 36.000 0.00 6.89 40.94 2.66
1403 1470 5.865552 AGCATGTTTTAGTGCATCATGAAAC 59.134 36.000 0.00 11.68 43.63 2.78
1404 1471 6.028146 AGCATGTTTTAGTGCATCATGAAA 57.972 33.333 0.00 0.00 43.63 2.69
1405 1472 5.183522 TGAGCATGTTTTAGTGCATCATGAA 59.816 36.000 0.00 0.00 43.63 2.57
1406 1473 4.701171 TGAGCATGTTTTAGTGCATCATGA 59.299 37.500 0.00 0.00 43.63 3.07
1407 1474 4.989044 TGAGCATGTTTTAGTGCATCATG 58.011 39.130 0.00 0.47 43.63 3.07
1408 1475 5.588240 CATGAGCATGTTTTAGTGCATCAT 58.412 37.500 2.34 3.98 43.63 2.45
1440 1513 3.318557 CGGGCCCTTAGTAAACTCTAGAG 59.681 52.174 22.43 18.49 0.00 2.43
1447 1520 1.092348 CAAGCGGGCCCTTAGTAAAC 58.908 55.000 22.43 0.00 0.00 2.01
1453 1526 0.472471 CTAATCCAAGCGGGCCCTTA 59.528 55.000 22.43 8.75 36.21 2.69
1454 1527 1.227383 CTAATCCAAGCGGGCCCTT 59.773 57.895 22.43 5.07 36.21 3.95
1455 1528 2.919043 CTAATCCAAGCGGGCCCT 59.081 61.111 22.43 0.00 36.21 5.19
1456 1529 2.907407 GCTAATCCAAGCGGGCCC 60.907 66.667 13.57 13.57 36.21 5.80
1462 1535 4.083271 ACAAGAGAAAACGCTAATCCAAGC 60.083 41.667 0.00 0.00 39.21 4.01
1463 1536 5.613358 ACAAGAGAAAACGCTAATCCAAG 57.387 39.130 0.00 0.00 0.00 3.61
1464 1537 7.412563 CGAATACAAGAGAAAACGCTAATCCAA 60.413 37.037 0.00 0.00 0.00 3.53
1465 1538 6.035650 CGAATACAAGAGAAAACGCTAATCCA 59.964 38.462 0.00 0.00 0.00 3.41
1466 1539 6.411652 CGAATACAAGAGAAAACGCTAATCC 58.588 40.000 0.00 0.00 0.00 3.01
1467 1540 6.411652 CCGAATACAAGAGAAAACGCTAATC 58.588 40.000 0.00 0.00 0.00 1.75
1468 1541 5.220605 GCCGAATACAAGAGAAAACGCTAAT 60.221 40.000 0.00 0.00 0.00 1.73
1469 1542 4.092383 GCCGAATACAAGAGAAAACGCTAA 59.908 41.667 0.00 0.00 0.00 3.09
1470 1543 3.615496 GCCGAATACAAGAGAAAACGCTA 59.385 43.478 0.00 0.00 0.00 4.26
1471 1544 2.415512 GCCGAATACAAGAGAAAACGCT 59.584 45.455 0.00 0.00 0.00 5.07
1472 1545 2.415512 AGCCGAATACAAGAGAAAACGC 59.584 45.455 0.00 0.00 0.00 4.84
1473 1546 3.181520 CCAGCCGAATACAAGAGAAAACG 60.182 47.826 0.00 0.00 0.00 3.60
1474 1547 3.751698 ACCAGCCGAATACAAGAGAAAAC 59.248 43.478 0.00 0.00 0.00 2.43
1475 1548 4.015872 ACCAGCCGAATACAAGAGAAAA 57.984 40.909 0.00 0.00 0.00 2.29
1476 1549 3.695830 ACCAGCCGAATACAAGAGAAA 57.304 42.857 0.00 0.00 0.00 2.52
1477 1550 3.334691 CAACCAGCCGAATACAAGAGAA 58.665 45.455 0.00 0.00 0.00 2.87
1478 1551 2.354704 CCAACCAGCCGAATACAAGAGA 60.355 50.000 0.00 0.00 0.00 3.10
1479 1552 2.009774 CCAACCAGCCGAATACAAGAG 58.990 52.381 0.00 0.00 0.00 2.85
1480 1553 1.349688 ACCAACCAGCCGAATACAAGA 59.650 47.619 0.00 0.00 0.00 3.02
1481 1554 1.737793 GACCAACCAGCCGAATACAAG 59.262 52.381 0.00 0.00 0.00 3.16
1482 1555 1.816074 GACCAACCAGCCGAATACAA 58.184 50.000 0.00 0.00 0.00 2.41
1483 1556 0.390603 CGACCAACCAGCCGAATACA 60.391 55.000 0.00 0.00 0.00 2.29
1484 1557 0.390735 ACGACCAACCAGCCGAATAC 60.391 55.000 0.00 0.00 0.00 1.89
1485 1558 0.322322 AACGACCAACCAGCCGAATA 59.678 50.000 0.00 0.00 0.00 1.75
1486 1559 0.536460 AAACGACCAACCAGCCGAAT 60.536 50.000 0.00 0.00 0.00 3.34
1487 1560 0.748729 AAAACGACCAACCAGCCGAA 60.749 50.000 0.00 0.00 0.00 4.30
1488 1561 1.153127 AAAACGACCAACCAGCCGA 60.153 52.632 0.00 0.00 0.00 5.54
1489 1562 1.008995 CAAAACGACCAACCAGCCG 60.009 57.895 0.00 0.00 0.00 5.52
1490 1563 0.458260 AACAAAACGACCAACCAGCC 59.542 50.000 0.00 0.00 0.00 4.85
1491 1564 2.190161 GAAACAAAACGACCAACCAGC 58.810 47.619 0.00 0.00 0.00 4.85
1492 1565 2.164624 TGGAAACAAAACGACCAACCAG 59.835 45.455 0.00 0.00 37.44 4.00
1493 1566 2.164624 CTGGAAACAAAACGACCAACCA 59.835 45.455 0.00 0.00 42.06 3.67
1494 1567 2.480587 CCTGGAAACAAAACGACCAACC 60.481 50.000 0.00 0.00 42.06 3.77
1495 1568 2.804647 CCTGGAAACAAAACGACCAAC 58.195 47.619 0.00 0.00 42.06 3.77
1496 1569 1.135333 GCCTGGAAACAAAACGACCAA 59.865 47.619 0.00 0.00 42.06 3.67
1497 1570 0.741915 GCCTGGAAACAAAACGACCA 59.258 50.000 0.00 0.00 42.06 4.02
1498 1571 0.317519 CGCCTGGAAACAAAACGACC 60.318 55.000 0.00 0.00 42.06 4.79
1499 1572 0.379316 ACGCCTGGAAACAAAACGAC 59.621 50.000 0.00 0.00 42.06 4.34
1500 1573 1.950828 TACGCCTGGAAACAAAACGA 58.049 45.000 0.00 0.00 42.06 3.85
1501 1574 2.759538 TTACGCCTGGAAACAAAACG 57.240 45.000 0.00 0.00 42.06 3.60
1502 1575 5.044558 TGATTTTACGCCTGGAAACAAAAC 58.955 37.500 0.00 0.00 42.06 2.43
1503 1576 5.263968 TGATTTTACGCCTGGAAACAAAA 57.736 34.783 0.00 0.00 42.06 2.44
1504 1577 4.794655 GCTGATTTTACGCCTGGAAACAAA 60.795 41.667 0.00 0.00 42.06 2.83
1505 1578 3.305064 GCTGATTTTACGCCTGGAAACAA 60.305 43.478 0.00 0.00 42.06 2.83
1506 1579 2.227865 GCTGATTTTACGCCTGGAAACA 59.772 45.455 0.00 0.00 39.59 2.83
1507 1580 2.488153 AGCTGATTTTACGCCTGGAAAC 59.512 45.455 0.00 0.00 0.00 2.78
1508 1581 2.487762 CAGCTGATTTTACGCCTGGAAA 59.512 45.455 8.42 0.00 0.00 3.13
1509 1582 2.083774 CAGCTGATTTTACGCCTGGAA 58.916 47.619 8.42 0.00 0.00 3.53
1510 1583 1.003118 ACAGCTGATTTTACGCCTGGA 59.997 47.619 23.35 0.00 0.00 3.86
1511 1584 1.131126 CACAGCTGATTTTACGCCTGG 59.869 52.381 23.35 0.00 0.00 4.45
1512 1585 2.076100 TCACAGCTGATTTTACGCCTG 58.924 47.619 23.35 3.82 0.00 4.85
1513 1586 2.076863 GTCACAGCTGATTTTACGCCT 58.923 47.619 23.35 0.00 0.00 5.52
1514 1587 1.130561 GGTCACAGCTGATTTTACGCC 59.869 52.381 23.35 6.86 0.00 5.68
1515 1588 1.201921 CGGTCACAGCTGATTTTACGC 60.202 52.381 23.35 1.27 0.00 4.42
1516 1589 1.393539 CCGGTCACAGCTGATTTTACG 59.606 52.381 23.35 15.68 0.00 3.18
1517 1590 2.423577 ACCGGTCACAGCTGATTTTAC 58.576 47.619 23.35 10.08 0.00 2.01
1518 1591 2.851263 ACCGGTCACAGCTGATTTTA 57.149 45.000 23.35 0.00 0.00 1.52
1519 1592 2.851263 TACCGGTCACAGCTGATTTT 57.149 45.000 23.35 0.00 0.00 1.82
1520 1593 3.350219 AATACCGGTCACAGCTGATTT 57.650 42.857 23.35 0.00 0.00 2.17
1521 1594 3.350219 AAATACCGGTCACAGCTGATT 57.650 42.857 23.35 3.78 0.00 2.57
1522 1595 3.350219 AAAATACCGGTCACAGCTGAT 57.650 42.857 23.35 1.19 0.00 2.90
1523 1596 2.851263 AAAATACCGGTCACAGCTGA 57.149 45.000 23.35 0.00 0.00 4.26
1524 1597 3.331150 TGTAAAATACCGGTCACAGCTG 58.669 45.455 12.40 13.48 0.00 4.24
1525 1598 3.688694 TGTAAAATACCGGTCACAGCT 57.311 42.857 12.40 0.00 0.00 4.24
1526 1599 3.749609 ACTTGTAAAATACCGGTCACAGC 59.250 43.478 12.40 0.00 0.00 4.40
1527 1600 4.753107 ACACTTGTAAAATACCGGTCACAG 59.247 41.667 12.40 5.01 0.00 3.66
1528 1601 4.706035 ACACTTGTAAAATACCGGTCACA 58.294 39.130 12.40 6.06 0.00 3.58
1529 1602 6.783892 TTACACTTGTAAAATACCGGTCAC 57.216 37.500 12.40 3.12 37.54 3.67
1549 1622 7.010091 CCGCTTGGAATGGATGTAAAATTTTAC 59.990 37.037 27.05 27.05 38.31 2.01
1550 1623 7.038659 CCGCTTGGAATGGATGTAAAATTTTA 58.961 34.615 6.54 6.54 33.02 1.52
1551 1624 5.874261 CCGCTTGGAATGGATGTAAAATTTT 59.126 36.000 8.75 8.75 33.02 1.82
1552 1625 5.186797 TCCGCTTGGAATGGATGTAAAATTT 59.813 36.000 0.00 0.00 39.40 1.82
1553 1626 4.709397 TCCGCTTGGAATGGATGTAAAATT 59.291 37.500 0.00 0.00 39.40 1.82
1554 1627 4.277476 TCCGCTTGGAATGGATGTAAAAT 58.723 39.130 0.00 0.00 39.40 1.82
1555 1628 3.691575 TCCGCTTGGAATGGATGTAAAA 58.308 40.909 0.00 0.00 39.40 1.52
1556 1629 3.278574 CTCCGCTTGGAATGGATGTAAA 58.721 45.455 0.00 0.00 42.58 2.01
1557 1630 2.917933 CTCCGCTTGGAATGGATGTAA 58.082 47.619 0.00 0.00 42.58 2.41
1558 1631 1.475034 GCTCCGCTTGGAATGGATGTA 60.475 52.381 0.00 0.00 42.58 2.29
1559 1632 0.749454 GCTCCGCTTGGAATGGATGT 60.749 55.000 0.00 0.00 42.58 3.06
1560 1633 1.450531 GGCTCCGCTTGGAATGGATG 61.451 60.000 0.00 0.00 42.58 3.51
1561 1634 1.152881 GGCTCCGCTTGGAATGGAT 60.153 57.895 0.00 0.00 42.58 3.41
1562 1635 0.980754 TAGGCTCCGCTTGGAATGGA 60.981 55.000 0.00 0.00 42.58 3.41
1563 1636 0.107214 TTAGGCTCCGCTTGGAATGG 60.107 55.000 0.00 0.00 42.58 3.16
1564 1637 1.303309 CTTAGGCTCCGCTTGGAATG 58.697 55.000 0.00 0.00 42.58 2.67
1565 1638 0.912486 ACTTAGGCTCCGCTTGGAAT 59.088 50.000 0.00 0.00 42.58 3.01
1566 1639 0.690762 AACTTAGGCTCCGCTTGGAA 59.309 50.000 0.00 0.00 42.58 3.53
1567 1640 0.690762 AAACTTAGGCTCCGCTTGGA 59.309 50.000 0.00 0.00 40.32 3.53
1568 1641 1.087501 GAAACTTAGGCTCCGCTTGG 58.912 55.000 0.00 0.00 0.00 3.61
1569 1642 1.734465 CAGAAACTTAGGCTCCGCTTG 59.266 52.381 0.00 0.00 0.00 4.01
1570 1643 1.339151 CCAGAAACTTAGGCTCCGCTT 60.339 52.381 0.00 0.00 0.00 4.68
1571 1644 0.250513 CCAGAAACTTAGGCTCCGCT 59.749 55.000 0.00 0.00 0.00 5.52
1572 1645 0.744771 CCCAGAAACTTAGGCTCCGC 60.745 60.000 0.00 0.00 0.00 5.54
1573 1646 0.902531 TCCCAGAAACTTAGGCTCCG 59.097 55.000 0.00 0.00 0.00 4.63
1574 1647 4.772886 TTATCCCAGAAACTTAGGCTCC 57.227 45.455 0.00 0.00 0.00 4.70
1575 1648 4.571176 CGTTTATCCCAGAAACTTAGGCTC 59.429 45.833 0.00 0.00 35.13 4.70
1576 1649 4.224370 TCGTTTATCCCAGAAACTTAGGCT 59.776 41.667 0.00 0.00 35.13 4.58
1577 1650 4.510571 TCGTTTATCCCAGAAACTTAGGC 58.489 43.478 0.00 0.00 35.13 3.93
1578 1651 5.974108 TCTCGTTTATCCCAGAAACTTAGG 58.026 41.667 0.00 0.00 35.13 2.69
1579 1652 6.535508 CCTTCTCGTTTATCCCAGAAACTTAG 59.464 42.308 0.00 0.00 35.13 2.18
1580 1653 6.211986 TCCTTCTCGTTTATCCCAGAAACTTA 59.788 38.462 0.00 0.00 35.13 2.24
1601 1675 2.186903 CGCACCGCCATACTCCTT 59.813 61.111 0.00 0.00 0.00 3.36
1613 1687 1.659098 GTATGTCACTACTTGCGCACC 59.341 52.381 11.12 0.00 0.00 5.01
1614 1688 2.607187 AGTATGTCACTACTTGCGCAC 58.393 47.619 11.12 0.00 34.98 5.34
1618 1692 6.037098 CCAGAACTAGTATGTCACTACTTGC 58.963 44.000 0.00 0.00 38.80 4.01
1619 1693 7.121463 ACTCCAGAACTAGTATGTCACTACTTG 59.879 40.741 0.00 0.00 38.80 3.16
1621 1695 6.723339 ACTCCAGAACTAGTATGTCACTACT 58.277 40.000 0.00 0.00 38.80 2.57
1623 1697 6.598457 GTGACTCCAGAACTAGTATGTCACTA 59.402 42.308 21.73 0.00 45.25 2.74
1624 1698 5.416326 GTGACTCCAGAACTAGTATGTCACT 59.584 44.000 21.73 0.00 45.25 3.41
1626 1700 4.395231 CGTGACTCCAGAACTAGTATGTCA 59.605 45.833 0.00 2.51 0.00 3.58
1627 1701 4.201930 CCGTGACTCCAGAACTAGTATGTC 60.202 50.000 0.00 0.00 0.00 3.06
1628 1702 3.695060 CCGTGACTCCAGAACTAGTATGT 59.305 47.826 0.00 0.00 0.00 2.29
1635 1709 5.422214 AATATTTCCGTGACTCCAGAACT 57.578 39.130 0.00 0.00 0.00 3.01
1649 1723 2.486918 GCATGGCCAGCAAATATTTCC 58.513 47.619 13.05 0.00 0.00 3.13
1663 1737 4.605640 ACATGTTAAATATGGGCATGGC 57.394 40.909 11.56 11.56 40.63 4.40
1683 1781 9.209175 CTTAGAGTGAGGCATATGGTTAAATAC 57.791 37.037 4.56 0.00 0.00 1.89
1711 1809 5.010415 CCAGATTGACTCAAAGAGGCTTTTT 59.990 40.000 1.09 0.00 38.75 1.94
1712 1810 4.522022 CCAGATTGACTCAAAGAGGCTTTT 59.478 41.667 1.09 0.00 38.75 2.27
1713 1811 4.077822 CCAGATTGACTCAAAGAGGCTTT 58.922 43.478 1.09 0.00 38.75 3.51
1714 1812 3.073650 ACCAGATTGACTCAAAGAGGCTT 59.926 43.478 1.09 0.00 38.75 4.35
1715 1813 2.641815 ACCAGATTGACTCAAAGAGGCT 59.358 45.455 1.09 0.00 38.75 4.58
1716 1814 2.746362 CACCAGATTGACTCAAAGAGGC 59.254 50.000 0.00 0.00 38.37 4.70
1719 1817 4.141505 TGTTCCACCAGATTGACTCAAAGA 60.142 41.667 0.00 0.00 0.00 2.52
1722 1820 3.855255 TGTTCCACCAGATTGACTCAA 57.145 42.857 0.00 0.00 0.00 3.02
1743 1841 5.594317 CCGACATATCTCCCTTGGAAAAATT 59.406 40.000 0.00 0.00 0.00 1.82
1749 1847 1.048601 GCCGACATATCTCCCTTGGA 58.951 55.000 0.00 0.00 0.00 3.53
1755 1853 5.179555 GGAATTAGTTTGCCGACATATCTCC 59.820 44.000 0.00 0.00 0.00 3.71
1757 1855 5.930135 AGGAATTAGTTTGCCGACATATCT 58.070 37.500 0.00 0.00 0.00 1.98
1765 1863 7.745620 ATTATCCTTAGGAATTAGTTTGCCG 57.254 36.000 4.56 0.00 34.34 5.69
1796 1894 3.119291 CCTGCAGTAATCAAGTAGCGAG 58.881 50.000 13.81 0.00 0.00 5.03
1800 1898 5.934625 ACAAACTCCTGCAGTAATCAAGTAG 59.065 40.000 13.81 5.53 32.30 2.57
1801 1899 5.865085 ACAAACTCCTGCAGTAATCAAGTA 58.135 37.500 13.81 0.00 32.30 2.24
1875 1973 8.432110 TCATGTAATCGTATTTGCATAGTTGT 57.568 30.769 0.00 0.00 31.77 3.32
1881 1979 6.426633 TCGGATTCATGTAATCGTATTTGCAT 59.573 34.615 10.03 0.00 44.32 3.96
1888 1986 5.509716 ACTGTCGGATTCATGTAATCGTA 57.490 39.130 10.03 1.74 44.32 3.43
1890 1988 7.408132 AATAACTGTCGGATTCATGTAATCG 57.592 36.000 10.03 4.26 44.32 3.34
1949 2049 8.890410 ATATATTGATTTTCCCTCCATCAAGG 57.110 34.615 0.00 0.00 39.64 3.61
2107 2212 6.855836 AGCAGCGAAATCATTTCAAAGAATA 58.144 32.000 10.76 0.00 39.63 1.75
2126 2231 2.035530 AGCACAAATAGGAGAGCAGC 57.964 50.000 0.00 0.00 0.00 5.25
2179 2284 0.778083 AACTCTTCCCCTTTCCCACC 59.222 55.000 0.00 0.00 0.00 4.61
2261 2366 7.503549 ACTTGGAGAGCTTCAATTTCAAAATT 58.496 30.769 0.00 0.00 39.07 1.82
2291 2396 5.105797 ACAGTTCTGTTGACAAATCTGCAAA 60.106 36.000 0.00 0.00 0.00 3.68
2293 2398 3.947196 ACAGTTCTGTTGACAAATCTGCA 59.053 39.130 0.00 0.00 0.00 4.41
2406 2512 4.220821 TCAGATCTTACGGCAGAAAGAACT 59.779 41.667 0.00 0.00 35.84 3.01
2408 2514 4.220821 ACTCAGATCTTACGGCAGAAAGAA 59.779 41.667 0.00 0.00 35.47 2.52
2410 2516 3.862267 CACTCAGATCTTACGGCAGAAAG 59.138 47.826 0.00 0.00 0.00 2.62
2419 2525 4.081420 TGCTTCTTCCCACTCAGATCTTAC 60.081 45.833 0.00 0.00 0.00 2.34
2421 2527 2.909006 TGCTTCTTCCCACTCAGATCTT 59.091 45.455 0.00 0.00 0.00 2.40
2496 2602 0.832983 TTGCAAAAGCCCAGAGCCAT 60.833 50.000 0.00 0.00 45.47 4.40
2508 2614 8.818141 TTCAAATTAATCATACCGTTGCAAAA 57.182 26.923 0.00 0.00 0.00 2.44
2539 2647 6.668541 TGCTGACATAAATCAAGCTAGAAC 57.331 37.500 0.00 0.00 0.00 3.01
2542 2651 7.493743 AGAATGCTGACATAAATCAAGCTAG 57.506 36.000 0.00 0.00 34.62 3.42
2607 2716 2.544267 GTCAGCACAGGTTCTACACAAC 59.456 50.000 0.00 0.00 0.00 3.32
2618 2727 5.879223 AGATAAAATCTTGAGTCAGCACAGG 59.121 40.000 0.00 0.00 35.76 4.00
2677 2794 9.713713 ATGAAACATCAGAGATCTCATCAATAG 57.286 33.333 24.39 9.63 0.00 1.73
2696 2813 4.709397 ACCTTCAAGTGGACAAATGAAACA 59.291 37.500 0.00 0.00 31.94 2.83
2834 2951 3.054802 CCTGGTACTTCATGGCTTCTTCT 60.055 47.826 0.00 0.00 0.00 2.85
2849 2966 6.316390 CCAACATAACATTTCTCTCCTGGTAC 59.684 42.308 0.00 0.00 0.00 3.34
2851 2968 5.014123 TCCAACATAACATTTCTCTCCTGGT 59.986 40.000 0.00 0.00 0.00 4.00
2900 3023 1.133668 CCCCCATCTGTCATCCTTTCC 60.134 57.143 0.00 0.00 0.00 3.13
3010 3133 9.678260 AAAGCAGAGAGAACACAATATAATTCT 57.322 29.630 0.00 0.00 34.11 2.40
3012 3135 9.678260 AGAAAGCAGAGAGAACACAATATAATT 57.322 29.630 0.00 0.00 0.00 1.40
3018 3141 7.500559 AGTTTAAGAAAGCAGAGAGAACACAAT 59.499 33.333 0.00 0.00 0.00 2.71
3025 3148 4.757149 GCCAAGTTTAAGAAAGCAGAGAGA 59.243 41.667 0.00 0.00 0.00 3.10
3038 3161 4.333926 GCATGTTTTGTTGGCCAAGTTTAA 59.666 37.500 21.21 9.31 33.75 1.52
3053 3176 3.157087 CCCAGAAGTACCTGCATGTTTT 58.843 45.455 0.00 0.00 32.97 2.43
3129 3252 7.741785 TGTAAGTTTTCTCATTAGGGTTCTCA 58.258 34.615 0.00 0.00 0.00 3.27
3186 3309 1.992557 AGGGAGTCTTTTGGCCATGTA 59.007 47.619 6.09 0.00 0.00 2.29
3265 3388 1.955778 TCGACGGTTTGTAGGAGTTGA 59.044 47.619 0.00 0.00 0.00 3.18
3330 3453 4.214310 TCAAAACCTCCAGCTCATTTTCA 58.786 39.130 0.00 0.00 0.00 2.69
3433 3556 1.914634 CTGTTCTGTAGCCTGCGTAG 58.085 55.000 0.00 0.00 0.00 3.51
3440 3563 3.375299 CCAATTAGTGCTGTTCTGTAGCC 59.625 47.826 0.00 0.00 40.42 3.93
3441 3564 4.253685 TCCAATTAGTGCTGTTCTGTAGC 58.746 43.478 0.00 0.00 41.49 3.58
3467 3590 0.529833 ACTCGACTGCTCCACATCTG 59.470 55.000 0.00 0.00 0.00 2.90
3503 3626 2.536761 ATGAAACCGGAGAAACACGA 57.463 45.000 9.46 0.00 0.00 4.35
3519 3642 3.724478 ACAATCCAGGTCCAGACTATGA 58.276 45.455 0.00 0.00 0.00 2.15
3526 3649 1.210478 CTGGGTACAATCCAGGTCCAG 59.790 57.143 8.39 2.42 45.95 3.86
3655 4135 6.158598 GCAAGGAAAGCTCATTAATCAAACA 58.841 36.000 0.00 0.00 0.00 2.83
3716 4196 4.142945 GCACTCAAGAGCTAACATCAAGTG 60.143 45.833 0.00 0.00 35.78 3.16
3718 4198 4.252073 AGCACTCAAGAGCTAACATCAAG 58.748 43.478 0.00 0.00 40.12 3.02
3720 4200 3.513119 AGAGCACTCAAGAGCTAACATCA 59.487 43.478 1.81 0.00 41.91 3.07
3721 4201 4.122143 AGAGCACTCAAGAGCTAACATC 57.878 45.455 1.81 0.00 41.91 3.06
3722 4202 4.550076 AAGAGCACTCAAGAGCTAACAT 57.450 40.909 1.81 0.00 41.91 2.71
3723 4203 4.060900 CAAAGAGCACTCAAGAGCTAACA 58.939 43.478 1.81 0.00 41.91 2.41
3724 4204 3.434984 CCAAAGAGCACTCAAGAGCTAAC 59.565 47.826 1.81 0.00 41.91 2.34
3725 4205 3.324846 TCCAAAGAGCACTCAAGAGCTAA 59.675 43.478 1.81 0.00 41.91 3.09
3726 4206 2.899900 TCCAAAGAGCACTCAAGAGCTA 59.100 45.455 1.81 0.00 41.91 3.32
3727 4207 1.696336 TCCAAAGAGCACTCAAGAGCT 59.304 47.619 1.38 1.38 44.44 4.09
3728 4208 2.175878 TCCAAAGAGCACTCAAGAGC 57.824 50.000 0.00 0.00 0.00 4.09
3729 4209 3.119919 GCATTCCAAAGAGCACTCAAGAG 60.120 47.826 0.00 0.00 0.00 2.85
3759 4240 1.879380 TGATCACCTCGTGCTTTTTGG 59.121 47.619 0.00 0.00 32.98 3.28
3813 4351 0.662619 TCGGCAGAACAAAGCAGTTG 59.337 50.000 0.00 0.00 43.43 3.16
3821 4359 2.360844 TCAAACACTTCGGCAGAACAA 58.639 42.857 0.00 0.00 32.15 2.83
3825 4375 2.254546 ACATCAAACACTTCGGCAGA 57.745 45.000 0.00 0.00 0.00 4.26
3863 4413 4.104831 AGCCCTCCTAGAGTACATGTTTT 58.895 43.478 2.30 0.00 0.00 2.43
3923 4476 4.616953 CCAAAAATAACTCAAACGTGGCT 58.383 39.130 0.00 0.00 0.00 4.75
3924 4477 3.183574 GCCAAAAATAACTCAAACGTGGC 59.816 43.478 0.00 0.00 41.93 5.01
3925 4478 4.444056 CAGCCAAAAATAACTCAAACGTGG 59.556 41.667 0.00 0.00 0.00 4.94
3926 4479 5.040635 ACAGCCAAAAATAACTCAAACGTG 58.959 37.500 0.00 0.00 0.00 4.49
3927 4480 5.040635 CACAGCCAAAAATAACTCAAACGT 58.959 37.500 0.00 0.00 0.00 3.99
3938 4502 3.395639 CAAGATGCACACAGCCAAAAAT 58.604 40.909 0.00 0.00 44.83 1.82
4037 4690 3.117701 TGTCTGGGTGGTCTGAATGAAAA 60.118 43.478 0.00 0.00 0.00 2.29
4103 4756 9.981460 AACTCTATCCCTTTCATAATTCTTGTT 57.019 29.630 0.00 0.00 0.00 2.83
4119 4772 6.094186 GTGAAATGTCTTTGGAACTCTATCCC 59.906 42.308 0.00 0.00 38.82 3.85
4123 4776 5.163141 TGGGTGAAATGTCTTTGGAACTCTA 60.163 40.000 0.00 0.00 0.00 2.43
4129 4782 2.238521 GCTGGGTGAAATGTCTTTGGA 58.761 47.619 0.00 0.00 0.00 3.53
4161 4855 4.390297 GGTGAACTAGTCAGATTTGCTGTC 59.610 45.833 0.00 0.00 45.14 3.51
4184 4878 6.552629 ACTACTATCGATTATGTGTATGCCG 58.447 40.000 1.71 0.00 0.00 5.69
4190 4884 8.566260 GTGTTAGGACTACTATCGATTATGTGT 58.434 37.037 1.71 0.00 0.00 3.72
4191 4885 8.565416 TGTGTTAGGACTACTATCGATTATGTG 58.435 37.037 1.71 0.00 0.00 3.21
4343 5045 1.674322 ATAAACTGCCGCCGTTGCT 60.674 52.632 0.51 0.00 34.43 3.91
4344 5046 1.514014 CATAAACTGCCGCCGTTGC 60.514 57.895 0.51 0.00 0.00 4.17
4345 5047 1.136565 CCATAAACTGCCGCCGTTG 59.863 57.895 0.51 0.00 0.00 4.10
4346 5048 1.003112 TCCATAAACTGCCGCCGTT 60.003 52.632 0.00 0.00 0.00 4.44
4347 5049 1.743995 GTCCATAAACTGCCGCCGT 60.744 57.895 0.00 0.00 0.00 5.68
4348 5050 2.469516 GGTCCATAAACTGCCGCCG 61.470 63.158 0.00 0.00 0.00 6.46
4351 5053 1.087771 GTCCGGTCCATAAACTGCCG 61.088 60.000 0.00 0.00 41.82 5.69
4513 5215 5.647225 TGTGCTATGATGTTGTATGAAGCAA 59.353 36.000 0.00 0.00 40.12 3.91
4514 5216 5.184711 TGTGCTATGATGTTGTATGAAGCA 58.815 37.500 0.00 0.00 36.45 3.91
4515 5217 5.739752 TGTGCTATGATGTTGTATGAAGC 57.260 39.130 0.00 0.00 0.00 3.86
4516 5218 9.655769 GTTATTGTGCTATGATGTTGTATGAAG 57.344 33.333 0.00 0.00 0.00 3.02
4539 5245 9.360093 CACCCGATTAAATTGCTTAATTTGTTA 57.640 29.630 7.94 0.00 39.79 2.41
4552 5258 2.808244 CGCATTGCACCCGATTAAATT 58.192 42.857 9.69 0.00 0.00 1.82
4652 5367 3.066203 AGAGCGATGACCGTTTTGTTTTT 59.934 39.130 0.00 0.00 41.15 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.