Multiple sequence alignment - TraesCS2B01G479500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G479500 chr2B 100.000 5068 0 0 809 5876 676764187 676769254 0.000000e+00 9359.0
1 TraesCS2B01G479500 chr2B 89.103 1817 171 15 1082 2877 677017516 677015706 0.000000e+00 2233.0
2 TraesCS2B01G479500 chr2B 80.670 2178 290 70 1106 3212 694777965 694775848 0.000000e+00 1568.0
3 TraesCS2B01G479500 chr2B 80.496 2179 291 73 1106 3212 694749258 694747142 0.000000e+00 1546.0
4 TraesCS2B01G479500 chr2B 79.796 1767 239 64 1506 3212 694699840 694698132 0.000000e+00 1177.0
5 TraesCS2B01G479500 chr2B 100.000 552 0 0 1 552 676763379 676763930 0.000000e+00 1020.0
6 TraesCS2B01G479500 chr2B 84.882 721 71 19 4162 4864 677014465 677013765 0.000000e+00 693.0
7 TraesCS2B01G479500 chr2B 85.878 524 47 16 3324 3833 677015342 677014832 3.120000e-147 532.0
8 TraesCS2B01G479500 chr2B 84.653 404 42 11 2539 2925 694605061 694604661 9.240000e-103 385.0
9 TraesCS2B01G479500 chr2B 81.327 407 54 9 1109 1504 694611854 694611459 1.590000e-80 311.0
10 TraesCS2B01G479500 chr2B 97.203 143 4 0 809 951 702728222 702728364 5.880000e-60 243.0
11 TraesCS2B01G479500 chr2B 97.345 113 3 0 440 552 282065043 282064931 6.010000e-45 193.0
12 TraesCS2B01G479500 chr2B 85.714 182 22 3 3888 4068 677014833 677014655 7.770000e-44 189.0
13 TraesCS2B01G479500 chr2B 85.827 127 13 4 5440 5565 795261724 795261602 4.780000e-26 130.0
14 TraesCS2B01G479500 chr2D 96.737 2176 64 4 1074 3243 565097988 565100162 0.000000e+00 3618.0
15 TraesCS2B01G479500 chr2D 89.109 1818 171 14 1081 2877 565149375 565147564 0.000000e+00 2235.0
16 TraesCS2B01G479500 chr2D 95.536 1165 34 7 3886 5043 565100625 565101778 0.000000e+00 1847.0
17 TraesCS2B01G479500 chr2D 81.097 2079 287 54 1178 3212 577628263 577630279 0.000000e+00 1565.0
18 TraesCS2B01G479500 chr2D 96.000 450 15 2 3324 3771 565100160 565100608 0.000000e+00 728.0
19 TraesCS2B01G479500 chr2D 86.434 516 51 13 3324 3832 565147200 565146697 1.110000e-151 547.0
20 TraesCS2B01G479500 chr2D 85.255 529 52 17 4336 4852 565062943 565062429 6.750000e-144 521.0
21 TraesCS2B01G479500 chr2D 85.294 510 49 17 4336 4833 565146227 565145732 2.440000e-138 503.0
22 TraesCS2B01G479500 chr2D 86.301 438 36 13 3886 4318 565146700 565146282 6.940000e-124 455.0
23 TraesCS2B01G479500 chr2D 85.581 430 36 15 3895 4318 565063407 565062998 1.510000e-115 427.0
24 TraesCS2B01G479500 chr2D 77.163 705 99 33 4340 5029 577630666 577631323 2.600000e-93 353.0
25 TraesCS2B01G479500 chr2D 86.129 310 31 7 3525 3833 565063710 565063412 2.040000e-84 324.0
26 TraesCS2B01G479500 chr2D 94.565 92 5 0 3238 3329 645267809 645267900 6.140000e-30 143.0
27 TraesCS2B01G479500 chr2D 81.068 206 9 11 5245 5439 565101775 565101961 2.860000e-28 137.0
28 TraesCS2B01G479500 chr2D 96.000 75 3 0 238 312 565097726 565097800 8.000000e-24 122.0
29 TraesCS2B01G479500 chr2D 94.937 79 1 1 309 387 565097839 565097914 2.880000e-23 121.0
30 TraesCS2B01G479500 chr2A 95.974 2012 64 9 1014 3020 705539035 705541034 0.000000e+00 3251.0
31 TraesCS2B01G479500 chr2A 89.274 1818 165 17 1081 2874 705590360 705588549 0.000000e+00 2250.0
32 TraesCS2B01G479500 chr2A 93.388 1210 37 11 3886 5090 705541841 705543012 0.000000e+00 1751.0
33 TraesCS2B01G479500 chr2A 81.147 1936 281 49 1178 3065 715777175 715775276 0.000000e+00 1476.0
34 TraesCS2B01G479500 chr2A 96.282 511 13 4 3324 3832 705541338 705541844 0.000000e+00 833.0
35 TraesCS2B01G479500 chr2A 84.884 516 57 15 3324 3832 705588180 705587679 8.790000e-138 501.0
36 TraesCS2B01G479500 chr2A 84.016 488 45 15 4379 4850 705587185 705586715 6.990000e-119 438.0
37 TraesCS2B01G479500 chr2A 85.388 438 39 14 3886 4318 705587682 705587265 1.170000e-116 431.0
38 TraesCS2B01G479500 chr2A 95.067 223 8 2 5088 5309 705543172 705543392 1.210000e-91 348.0
39 TraesCS2B01G479500 chr2A 97.345 113 3 0 3131 3243 705541228 705541340 6.010000e-45 193.0
40 TraesCS2B01G479500 chr2A 94.737 95 5 0 3232 3326 71560843 71560749 1.320000e-31 148.0
41 TraesCS2B01G479500 chr2A 93.684 95 6 0 3232 3326 71546678 71546584 6.140000e-30 143.0
42 TraesCS2B01G479500 chr2A 94.382 89 4 1 3045 3133 705541026 705541113 1.030000e-27 135.0
43 TraesCS2B01G479500 chr2A 92.473 93 5 2 309 400 705538914 705539005 1.330000e-26 132.0
44 TraesCS2B01G479500 chr2A 90.196 102 7 1 211 312 705538703 705538801 4.780000e-26 130.0
45 TraesCS2B01G479500 chr5B 82.605 2104 260 48 1030 3087 432707555 432709598 0.000000e+00 1760.0
46 TraesCS2B01G479500 chr5B 81.647 583 62 21 4342 4914 432710854 432711401 5.400000e-120 442.0
47 TraesCS2B01G479500 chr5B 80.161 373 46 15 3414 3776 432709969 432710323 2.720000e-63 254.0
48 TraesCS2B01G479500 chr5B 97.203 143 4 0 809 951 61558750 61558608 5.880000e-60 243.0
49 TraesCS2B01G479500 chr5B 97.203 143 4 0 809 951 604227661 604227519 5.880000e-60 243.0
50 TraesCS2B01G479500 chr5B 92.308 156 8 3 400 552 512982645 512982491 9.910000e-53 219.0
51 TraesCS2B01G479500 chr5B 99.115 113 1 0 440 552 61558914 61558802 2.780000e-48 204.0
52 TraesCS2B01G479500 chr5B 99.115 113 1 0 440 552 528367683 528367571 2.780000e-48 204.0
53 TraesCS2B01G479500 chr5B 95.918 98 4 0 455 552 672112358 672112261 6.090000e-35 159.0
54 TraesCS2B01G479500 chr5B 89.231 65 4 3 395 459 122447387 122447448 1.760000e-10 78.7
55 TraesCS2B01G479500 chr5A 83.374 1221 172 14 1030 2234 467755311 467754106 0.000000e+00 1101.0
56 TraesCS2B01G479500 chr5A 90.909 319 22 6 5565 5876 568206056 568205738 7.040000e-114 422.0
57 TraesCS2B01G479500 chr5A 84.906 371 45 7 4342 4705 467741049 467740683 1.200000e-96 364.0
58 TraesCS2B01G479500 chr5A 98.230 113 2 0 440 552 123391979 123391867 1.290000e-46 198.0
59 TraesCS2B01G479500 chr7D 92.332 313 22 2 5565 5876 541425726 541426037 1.500000e-120 444.0
60 TraesCS2B01G479500 chr7D 88.889 126 11 2 5440 5565 72149112 72148990 1.020000e-32 152.0
61 TraesCS2B01G479500 chr6D 91.456 316 23 3 5565 5876 457348122 457348437 1.170000e-116 431.0
62 TraesCS2B01G479500 chr5D 91.429 315 23 4 5565 5876 379392073 379392386 4.210000e-116 429.0
63 TraesCS2B01G479500 chr5D 90.852 317 23 5 5565 5876 275203473 275203158 2.530000e-113 420.0
64 TraesCS2B01G479500 chr5D 88.618 123 12 1 5440 5562 469308727 469308847 1.320000e-31 148.0
65 TraesCS2B01G479500 chr7A 91.613 310 23 3 5567 5874 650461355 650461663 5.440000e-115 425.0
66 TraesCS2B01G479500 chr7A 86.179 123 15 1 5440 5562 643024574 643024694 1.330000e-26 132.0
67 TraesCS2B01G479500 chr1B 91.083 314 24 4 5565 5876 350413140 350413451 7.040000e-114 422.0
68 TraesCS2B01G479500 chr1B 96.748 123 2 2 430 552 405924294 405924414 2.780000e-48 204.0
69 TraesCS2B01G479500 chr1B 96.748 123 2 2 430 552 524162326 524162446 2.780000e-48 204.0
70 TraesCS2B01G479500 chr1B 98.000 100 2 0 453 552 108867484 108867385 2.180000e-39 174.0
71 TraesCS2B01G479500 chr1B 89.844 128 12 1 5438 5565 308535858 308535984 4.710000e-36 163.0
72 TraesCS2B01G479500 chr1B 96.591 88 3 0 3238 3325 142723454 142723541 4.750000e-31 147.0
73 TraesCS2B01G479500 chr1B 84.921 126 17 1 5440 5565 350412909 350413032 6.180000e-25 126.0
74 TraesCS2B01G479500 chr4A 90.881 318 22 6 5565 5876 680581235 680581551 2.530000e-113 420.0
75 TraesCS2B01G479500 chr4A 97.203 143 4 0 809 951 403171983 403172125 5.880000e-60 243.0
76 TraesCS2B01G479500 chr4A 97.203 143 4 0 809 951 621577314 621577456 5.880000e-60 243.0
77 TraesCS2B01G479500 chr4A 99.115 113 1 0 440 552 70593311 70593199 2.780000e-48 204.0
78 TraesCS2B01G479500 chr3B 90.823 316 25 4 5565 5876 709512061 709511746 2.530000e-113 420.0
79 TraesCS2B01G479500 chr3B 93.925 214 13 0 1 214 219431819 219432032 2.040000e-84 324.0
80 TraesCS2B01G479500 chr3B 91.189 227 19 1 1 226 220746299 220746525 2.060000e-79 307.0
81 TraesCS2B01G479500 chr3B 89.610 154 12 4 400 552 757867624 757867774 6.010000e-45 193.0
82 TraesCS2B01G479500 chr3B 89.683 126 10 2 5440 5565 709500462 709500584 2.190000e-34 158.0
83 TraesCS2B01G479500 chr3B 88.800 125 12 1 5441 5565 147659057 147659179 1.020000e-32 152.0
84 TraesCS2B01G479500 chr3B 93.137 102 6 1 3231 3331 8855101 8855202 1.320000e-31 148.0
85 TraesCS2B01G479500 chr6A 97.203 143 4 0 809 951 580321987 580322129 5.880000e-60 243.0
86 TraesCS2B01G479500 chr6A 98.230 113 2 0 440 552 72967885 72967773 1.290000e-46 198.0
87 TraesCS2B01G479500 chr6A 87.097 124 12 2 5440 5562 55283799 55283919 2.860000e-28 137.0
88 TraesCS2B01G479500 chr3A 97.203 143 4 0 809 951 219340726 219340584 5.880000e-60 243.0
89 TraesCS2B01G479500 chr3A 97.203 143 4 0 809 951 219342710 219342568 5.880000e-60 243.0
90 TraesCS2B01G479500 chr3A 97.203 143 4 0 809 951 334784731 334784589 5.880000e-60 243.0
91 TraesCS2B01G479500 chr3A 91.262 103 5 3 3225 3325 647400 647500 2.860000e-28 137.0
92 TraesCS2B01G479500 chr4B 99.115 113 1 0 440 552 455976735 455976623 2.780000e-48 204.0
93 TraesCS2B01G479500 chr4B 94.681 94 3 2 3241 3333 500839968 500840060 1.710000e-30 145.0
94 TraesCS2B01G479500 chr1A 99.115 113 1 0 440 552 492810363 492810251 2.780000e-48 204.0
95 TraesCS2B01G479500 chr6B 98.230 113 2 0 440 552 260118439 260118551 1.290000e-46 198.0
96 TraesCS2B01G479500 chr6B 89.908 109 7 4 3238 3343 720985488 720985381 2.860000e-28 137.0
97 TraesCS2B01G479500 chr1D 95.699 93 3 1 3241 3332 268929836 268929928 1.320000e-31 148.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G479500 chr2B 676763379 676769254 5875 False 5189.500000 9359 100.000000 1 5876 2 chr2B.!!$F2 5875
1 TraesCS2B01G479500 chr2B 694775848 694777965 2117 True 1568.000000 1568 80.670000 1106 3212 1 chr2B.!!$R6 2106
2 TraesCS2B01G479500 chr2B 694747142 694749258 2116 True 1546.000000 1546 80.496000 1106 3212 1 chr2B.!!$R5 2106
3 TraesCS2B01G479500 chr2B 694698132 694699840 1708 True 1177.000000 1177 79.796000 1506 3212 1 chr2B.!!$R4 1706
4 TraesCS2B01G479500 chr2B 677013765 677017516 3751 True 911.750000 2233 86.394250 1082 4864 4 chr2B.!!$R8 3782
5 TraesCS2B01G479500 chr2D 565097726 565101961 4235 False 1095.500000 3618 93.379667 238 5439 6 chr2D.!!$F2 5201
6 TraesCS2B01G479500 chr2D 577628263 577631323 3060 False 959.000000 1565 79.130000 1178 5029 2 chr2D.!!$F3 3851
7 TraesCS2B01G479500 chr2D 565145732 565149375 3643 True 935.000000 2235 86.784500 1081 4833 4 chr2D.!!$R2 3752
8 TraesCS2B01G479500 chr2D 565062429 565063710 1281 True 424.000000 521 85.655000 3525 4852 3 chr2D.!!$R1 1327
9 TraesCS2B01G479500 chr2A 715775276 715777175 1899 True 1476.000000 1476 81.147000 1178 3065 1 chr2A.!!$R3 1887
10 TraesCS2B01G479500 chr2A 705586715 705590360 3645 True 905.000000 2250 85.890500 1081 4850 4 chr2A.!!$R4 3769
11 TraesCS2B01G479500 chr2A 705538703 705543392 4689 False 846.625000 3251 94.388375 211 5309 8 chr2A.!!$F1 5098
12 TraesCS2B01G479500 chr5B 432707555 432711401 3846 False 818.666667 1760 81.471000 1030 4914 3 chr5B.!!$F2 3884
13 TraesCS2B01G479500 chr5A 467754106 467755311 1205 True 1101.000000 1101 83.374000 1030 2234 1 chr5A.!!$R3 1204
14 TraesCS2B01G479500 chr1B 350412909 350413451 542 False 274.000000 422 88.002000 5440 5876 2 chr1B.!!$F5 436
15 TraesCS2B01G479500 chr3A 219340584 219342710 2126 True 243.000000 243 97.203000 809 951 2 chr3A.!!$R2 142

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
169 170 0.034896 AGTGACGAGGAATGCCGTTT 59.965 50.000 0.00 0.00 39.30 3.60 F
410 527 0.178932 ATCGGGACTATAGCTGGCCA 60.179 55.000 4.71 4.71 0.00 5.36 F
416 533 0.180406 ACTATAGCTGGCCAAACGGG 59.820 55.000 7.01 0.00 40.85 5.28 F
1728 2242 0.815734 CCTCTGTATTCGACCCACGT 59.184 55.000 0.00 0.00 43.13 4.49 F
1830 2360 0.527817 CATCCTCCGTCGTGCCTTAC 60.528 60.000 0.00 0.00 0.00 2.34 F
2770 3342 1.066858 TGGCAAGTCGAAGAGATGGAC 60.067 52.381 0.00 0.00 36.95 4.02 F
4178 5403 0.972883 GGGAGCCCTATGTCAGCTAG 59.027 60.000 0.00 0.00 36.87 3.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1065 1245 0.421495 TCTGGGAGGGGATGAAGGAA 59.579 55.000 0.00 0.0 0.00 3.36 R
1759 2282 1.070601 AGCAAAATCAAGGGGTTGCAC 59.929 47.619 9.62 0.0 46.92 4.57 R
1830 2360 1.191535 TCATGGACTGGTAAGGTCGG 58.808 55.000 0.00 0.0 34.82 4.79 R
3309 4136 0.042131 AATGTACTCCCTCCGTCCCA 59.958 55.000 0.00 0.0 0.00 4.37 R
3310 4137 0.751452 GAATGTACTCCCTCCGTCCC 59.249 60.000 0.00 0.0 0.00 4.46 R
4698 5987 0.176680 CTTCTCCCAGATGTCCCACG 59.823 60.000 0.00 0.0 0.00 4.94 R
5599 7919 0.328158 GGGGAAGGGGTGGGAAGATA 60.328 60.000 0.00 0.0 0.00 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.978454 CCATCAAGCATCCTTCCTCC 58.022 55.000 0.00 0.00 0.00 4.30
20 21 1.478288 CCATCAAGCATCCTTCCTCCC 60.478 57.143 0.00 0.00 0.00 4.30
21 22 1.213678 CATCAAGCATCCTTCCTCCCA 59.786 52.381 0.00 0.00 0.00 4.37
22 23 0.620556 TCAAGCATCCTTCCTCCCAC 59.379 55.000 0.00 0.00 0.00 4.61
23 24 0.745845 CAAGCATCCTTCCTCCCACG 60.746 60.000 0.00 0.00 0.00 4.94
24 25 2.514824 GCATCCTTCCTCCCACGC 60.515 66.667 0.00 0.00 0.00 5.34
25 26 3.036429 GCATCCTTCCTCCCACGCT 62.036 63.158 0.00 0.00 0.00 5.07
26 27 1.144936 CATCCTTCCTCCCACGCTC 59.855 63.158 0.00 0.00 0.00 5.03
27 28 2.066999 ATCCTTCCTCCCACGCTCC 61.067 63.158 0.00 0.00 0.00 4.70
28 29 3.787001 CCTTCCTCCCACGCTCCC 61.787 72.222 0.00 0.00 0.00 4.30
29 30 2.685380 CTTCCTCCCACGCTCCCT 60.685 66.667 0.00 0.00 0.00 4.20
30 31 3.003173 TTCCTCCCACGCTCCCTG 61.003 66.667 0.00 0.00 0.00 4.45
33 34 4.767255 CTCCCACGCTCCCTGCAC 62.767 72.222 0.00 0.00 43.06 4.57
36 37 4.767255 CCACGCTCCCTGCACCTC 62.767 72.222 0.00 0.00 43.06 3.85
37 38 4.007644 CACGCTCCCTGCACCTCA 62.008 66.667 0.00 0.00 43.06 3.86
38 39 3.699894 ACGCTCCCTGCACCTCAG 61.700 66.667 0.00 0.00 43.06 3.35
46 47 4.710167 TGCACCTCAGCGCTGCAT 62.710 61.111 32.44 16.77 36.00 3.96
47 48 3.873883 GCACCTCAGCGCTGCATC 61.874 66.667 32.44 14.75 0.00 3.91
48 49 3.200593 CACCTCAGCGCTGCATCC 61.201 66.667 32.44 0.00 0.00 3.51
49 50 3.397439 ACCTCAGCGCTGCATCCT 61.397 61.111 32.44 9.64 0.00 3.24
50 51 2.124819 CCTCAGCGCTGCATCCTT 60.125 61.111 32.44 0.00 0.00 3.36
51 52 2.178890 CCTCAGCGCTGCATCCTTC 61.179 63.158 32.44 0.00 0.00 3.46
52 53 1.153409 CTCAGCGCTGCATCCTTCT 60.153 57.895 32.44 0.00 0.00 2.85
53 54 0.743701 CTCAGCGCTGCATCCTTCTT 60.744 55.000 32.44 0.00 0.00 2.52
54 55 0.742281 TCAGCGCTGCATCCTTCTTC 60.742 55.000 32.44 0.00 0.00 2.87
55 56 1.451028 AGCGCTGCATCCTTCTTCC 60.451 57.895 10.39 0.00 0.00 3.46
56 57 1.451028 GCGCTGCATCCTTCTTCCT 60.451 57.895 0.00 0.00 0.00 3.36
57 58 1.712977 GCGCTGCATCCTTCTTCCTG 61.713 60.000 0.00 0.00 0.00 3.86
58 59 1.094073 CGCTGCATCCTTCTTCCTGG 61.094 60.000 0.00 0.00 0.00 4.45
59 60 0.254178 GCTGCATCCTTCTTCCTGGA 59.746 55.000 0.00 0.00 36.72 3.86
60 61 1.746516 GCTGCATCCTTCTTCCTGGAG 60.747 57.143 0.00 0.00 35.63 3.86
61 62 0.254178 TGCATCCTTCTTCCTGGAGC 59.746 55.000 0.00 0.00 35.63 4.70
62 63 0.465278 GCATCCTTCTTCCTGGAGCC 60.465 60.000 0.00 0.00 35.63 4.70
63 64 0.914644 CATCCTTCTTCCTGGAGCCA 59.085 55.000 0.00 0.00 35.63 4.75
64 65 0.915364 ATCCTTCTTCCTGGAGCCAC 59.085 55.000 0.00 0.00 35.63 5.01
65 66 1.201429 TCCTTCTTCCTGGAGCCACC 61.201 60.000 0.00 0.00 39.54 4.61
73 74 2.934932 TGGAGCCACCATGCCTCA 60.935 61.111 0.00 0.00 44.64 3.86
74 75 2.356278 GGAGCCACCATGCCTCAA 59.644 61.111 0.00 0.00 38.79 3.02
75 76 1.304381 GGAGCCACCATGCCTCAAA 60.304 57.895 0.00 0.00 38.79 2.69
76 77 1.598701 GGAGCCACCATGCCTCAAAC 61.599 60.000 0.00 0.00 38.79 2.93
77 78 1.598701 GAGCCACCATGCCTCAAACC 61.599 60.000 0.00 0.00 0.00 3.27
78 79 2.993471 GCCACCATGCCTCAAACCG 61.993 63.158 0.00 0.00 0.00 4.44
79 80 2.342650 CCACCATGCCTCAAACCGG 61.343 63.158 0.00 0.00 0.00 5.28
80 81 1.303236 CACCATGCCTCAAACCGGA 60.303 57.895 9.46 0.00 0.00 5.14
81 82 0.893270 CACCATGCCTCAAACCGGAA 60.893 55.000 9.46 0.00 0.00 4.30
82 83 0.893727 ACCATGCCTCAAACCGGAAC 60.894 55.000 9.46 0.00 0.00 3.62
83 84 1.595093 CCATGCCTCAAACCGGAACC 61.595 60.000 9.46 0.00 0.00 3.62
84 85 1.304134 ATGCCTCAAACCGGAACCC 60.304 57.895 9.46 0.00 0.00 4.11
85 86 2.675423 GCCTCAAACCGGAACCCC 60.675 66.667 9.46 0.00 0.00 4.95
86 87 2.035155 CCTCAAACCGGAACCCCC 59.965 66.667 9.46 0.00 0.00 5.40
95 96 3.552219 GGAACCCCCGATCTCCTC 58.448 66.667 0.00 0.00 0.00 3.71
96 97 2.141448 GGAACCCCCGATCTCCTCC 61.141 68.421 0.00 0.00 0.00 4.30
97 98 2.040779 AACCCCCGATCTCCTCCC 60.041 66.667 0.00 0.00 0.00 4.30
98 99 3.715848 AACCCCCGATCTCCTCCCC 62.716 68.421 0.00 0.00 0.00 4.81
99 100 4.964241 CCCCCGATCTCCTCCCCC 62.964 77.778 0.00 0.00 0.00 5.40
119 120 4.699522 GCCTTCGCGTGGTTCCCT 62.700 66.667 18.60 0.00 0.00 4.20
120 121 2.742372 CCTTCGCGTGGTTCCCTG 60.742 66.667 5.77 0.00 0.00 4.45
121 122 2.742372 CTTCGCGTGGTTCCCTGG 60.742 66.667 5.77 0.00 0.00 4.45
122 123 4.323477 TTCGCGTGGTTCCCTGGG 62.323 66.667 6.33 6.33 0.00 4.45
126 127 4.263572 CGTGGTTCCCTGGGTGCA 62.264 66.667 13.56 0.00 0.00 4.57
127 128 2.282462 GTGGTTCCCTGGGTGCAG 60.282 66.667 13.56 0.00 0.00 4.41
128 129 2.449518 TGGTTCCCTGGGTGCAGA 60.450 61.111 13.56 0.00 0.00 4.26
129 130 2.034221 GGTTCCCTGGGTGCAGAC 59.966 66.667 13.56 5.18 0.00 3.51
130 131 2.829384 GGTTCCCTGGGTGCAGACA 61.829 63.158 13.56 0.00 0.00 3.41
131 132 1.150536 GTTCCCTGGGTGCAGACAA 59.849 57.895 13.56 0.00 0.00 3.18
132 133 0.251341 GTTCCCTGGGTGCAGACAAT 60.251 55.000 13.56 0.00 0.00 2.71
133 134 0.251297 TTCCCTGGGTGCAGACAATG 60.251 55.000 13.56 0.00 0.00 2.82
134 135 1.133181 TCCCTGGGTGCAGACAATGA 61.133 55.000 13.56 0.00 0.00 2.57
135 136 0.962356 CCCTGGGTGCAGACAATGAC 60.962 60.000 3.97 0.00 0.00 3.06
136 137 1.300971 CCTGGGTGCAGACAATGACG 61.301 60.000 0.00 0.00 0.00 4.35
137 138 1.300971 CTGGGTGCAGACAATGACGG 61.301 60.000 0.00 0.00 0.00 4.79
138 139 2.040544 GGGTGCAGACAATGACGGG 61.041 63.158 0.00 0.00 0.00 5.28
139 140 2.690778 GGTGCAGACAATGACGGGC 61.691 63.158 0.00 0.00 0.00 6.13
140 141 1.672356 GTGCAGACAATGACGGGCT 60.672 57.895 0.00 0.00 0.00 5.19
141 142 1.672030 TGCAGACAATGACGGGCTG 60.672 57.895 0.00 0.00 0.00 4.85
142 143 1.375908 GCAGACAATGACGGGCTGA 60.376 57.895 0.00 0.00 0.00 4.26
143 144 0.745845 GCAGACAATGACGGGCTGAT 60.746 55.000 0.00 0.00 0.00 2.90
144 145 1.012086 CAGACAATGACGGGCTGATG 58.988 55.000 0.00 0.00 0.00 3.07
145 146 0.107508 AGACAATGACGGGCTGATGG 60.108 55.000 0.00 0.00 0.00 3.51
146 147 0.392998 GACAATGACGGGCTGATGGT 60.393 55.000 0.00 0.00 0.00 3.55
147 148 0.392998 ACAATGACGGGCTGATGGTC 60.393 55.000 0.00 0.00 0.00 4.02
148 149 0.392863 CAATGACGGGCTGATGGTCA 60.393 55.000 0.00 0.00 44.00 4.02
149 150 0.107508 AATGACGGGCTGATGGTCAG 60.108 55.000 0.00 2.65 46.90 3.51
164 165 1.634702 GTCAGAGTGACGAGGAATGC 58.365 55.000 0.00 0.00 37.67 3.56
165 166 0.532573 TCAGAGTGACGAGGAATGCC 59.467 55.000 0.00 0.00 0.00 4.40
166 167 0.803768 CAGAGTGACGAGGAATGCCG 60.804 60.000 0.00 0.00 39.96 5.69
167 168 1.215647 GAGTGACGAGGAATGCCGT 59.784 57.895 0.00 0.00 42.17 5.68
168 169 0.389948 GAGTGACGAGGAATGCCGTT 60.390 55.000 0.00 0.00 39.30 4.44
169 170 0.034896 AGTGACGAGGAATGCCGTTT 59.965 50.000 0.00 0.00 39.30 3.60
170 171 1.274167 AGTGACGAGGAATGCCGTTTA 59.726 47.619 0.00 0.00 39.30 2.01
171 172 2.070783 GTGACGAGGAATGCCGTTTAA 58.929 47.619 0.00 0.00 39.30 1.52
172 173 2.481185 GTGACGAGGAATGCCGTTTAAA 59.519 45.455 0.00 0.00 39.30 1.52
173 174 3.058777 GTGACGAGGAATGCCGTTTAAAA 60.059 43.478 0.00 0.00 39.30 1.52
174 175 3.058777 TGACGAGGAATGCCGTTTAAAAC 60.059 43.478 0.00 0.00 39.30 2.43
186 187 3.537793 GTTTAAAACGGTGAGCTCTGG 57.462 47.619 16.19 6.49 0.00 3.86
187 188 2.178912 TTAAAACGGTGAGCTCTGGG 57.821 50.000 16.19 6.12 0.00 4.45
188 189 1.344065 TAAAACGGTGAGCTCTGGGA 58.656 50.000 16.19 0.00 0.00 4.37
189 190 0.472471 AAAACGGTGAGCTCTGGGAA 59.528 50.000 16.19 0.00 0.00 3.97
190 191 0.250338 AAACGGTGAGCTCTGGGAAC 60.250 55.000 16.19 3.78 0.00 3.62
206 207 3.855689 GGAACCATTCACACCATCTTG 57.144 47.619 0.00 0.00 0.00 3.02
207 208 2.094545 GGAACCATTCACACCATCTTGC 60.095 50.000 0.00 0.00 0.00 4.01
208 209 2.291209 ACCATTCACACCATCTTGCA 57.709 45.000 0.00 0.00 0.00 4.08
209 210 2.811410 ACCATTCACACCATCTTGCAT 58.189 42.857 0.00 0.00 0.00 3.96
213 214 2.728690 TCACACCATCTTGCATTTGC 57.271 45.000 0.00 0.00 42.50 3.68
216 217 0.244450 CACCATCTTGCATTTGCGGT 59.756 50.000 0.00 0.00 45.83 5.68
229 230 1.896220 TTGCGGTTGCTCTTCTTCAT 58.104 45.000 0.00 0.00 43.34 2.57
231 232 2.621338 TGCGGTTGCTCTTCTTCATAG 58.379 47.619 0.00 0.00 43.34 2.23
275 276 1.785353 ATTACGTGGTTGGGCCTGGT 61.785 55.000 4.53 0.00 38.35 4.00
292 293 1.308998 GGTCCATTTACTGCATCGGG 58.691 55.000 0.00 0.00 0.00 5.14
293 294 1.408266 GGTCCATTTACTGCATCGGGT 60.408 52.381 0.00 0.00 0.00 5.28
338 455 2.649531 TTCAGGTAAATATGGGCCGG 57.350 50.000 0.00 0.00 0.00 6.13
396 513 0.251430 GAGGAGGAGGAGGTATCGGG 60.251 65.000 0.00 0.00 0.00 5.14
397 514 0.701659 AGGAGGAGGAGGTATCGGGA 60.702 60.000 0.00 0.00 0.00 5.14
398 515 0.540133 GGAGGAGGAGGTATCGGGAC 60.540 65.000 0.00 0.00 0.00 4.46
399 516 0.479378 GAGGAGGAGGTATCGGGACT 59.521 60.000 0.00 0.00 0.00 3.85
400 517 1.704070 GAGGAGGAGGTATCGGGACTA 59.296 57.143 0.00 0.00 0.00 2.59
401 518 2.309458 GAGGAGGAGGTATCGGGACTAT 59.691 54.545 0.00 0.00 0.00 2.12
402 519 3.522750 GAGGAGGAGGTATCGGGACTATA 59.477 52.174 0.00 0.00 0.00 1.31
403 520 3.524380 AGGAGGAGGTATCGGGACTATAG 59.476 52.174 0.00 0.00 0.00 1.31
404 521 3.281158 GAGGAGGTATCGGGACTATAGC 58.719 54.545 0.00 0.00 35.18 2.97
405 522 2.920941 AGGAGGTATCGGGACTATAGCT 59.079 50.000 0.00 0.00 45.34 3.32
406 523 3.018149 GGAGGTATCGGGACTATAGCTG 58.982 54.545 0.00 0.00 43.28 4.24
407 524 3.018149 GAGGTATCGGGACTATAGCTGG 58.982 54.545 0.00 0.00 43.28 4.85
408 525 1.477295 GGTATCGGGACTATAGCTGGC 59.523 57.143 0.00 0.00 32.74 4.85
409 526 1.477295 GTATCGGGACTATAGCTGGCC 59.523 57.143 0.00 0.00 0.00 5.36
410 527 0.178932 ATCGGGACTATAGCTGGCCA 60.179 55.000 4.71 4.71 0.00 5.36
411 528 0.397957 TCGGGACTATAGCTGGCCAA 60.398 55.000 7.01 0.00 0.00 4.52
412 529 0.468226 CGGGACTATAGCTGGCCAAA 59.532 55.000 7.01 0.00 0.00 3.28
413 530 1.810412 CGGGACTATAGCTGGCCAAAC 60.810 57.143 7.01 1.16 0.00 2.93
414 531 1.583054 GGACTATAGCTGGCCAAACG 58.417 55.000 7.01 0.00 0.00 3.60
415 532 1.583054 GACTATAGCTGGCCAAACGG 58.417 55.000 7.01 0.00 0.00 4.44
416 533 0.180406 ACTATAGCTGGCCAAACGGG 59.820 55.000 7.01 0.00 40.85 5.28
425 542 4.726304 CCAAACGGGCCGGGCTAA 62.726 66.667 31.78 0.00 0.00 3.09
426 543 2.673687 CAAACGGGCCGGGCTAAA 60.674 61.111 31.78 0.00 0.00 1.85
427 544 2.674033 AAACGGGCCGGGCTAAAC 60.674 61.111 31.78 10.12 0.00 2.01
428 545 3.494736 AAACGGGCCGGGCTAAACA 62.495 57.895 31.78 0.00 0.00 2.83
429 546 3.912745 AACGGGCCGGGCTAAACAG 62.913 63.158 31.78 14.11 0.00 3.16
438 555 3.134127 GCTAAACAGGCCAGCCCG 61.134 66.667 5.01 0.00 39.21 6.13
439 556 2.668632 CTAAACAGGCCAGCCCGA 59.331 61.111 5.01 0.00 39.21 5.14
440 557 1.224592 CTAAACAGGCCAGCCCGAT 59.775 57.895 5.01 0.00 39.21 4.18
441 558 1.077787 TAAACAGGCCAGCCCGATG 60.078 57.895 5.01 0.00 39.21 3.84
442 559 2.550699 TAAACAGGCCAGCCCGATGG 62.551 60.000 5.01 0.00 43.72 3.51
469 586 3.122971 GGCACGGGCTAAACGGAC 61.123 66.667 10.74 0.00 40.87 4.79
470 587 3.122971 GCACGGGCTAAACGGACC 61.123 66.667 0.00 0.00 36.96 4.46
474 591 3.122971 GGGCTAAACGGACCGTGC 61.123 66.667 22.53 19.37 39.99 5.34
475 592 3.122971 GGCTAAACGGACCGTGCC 61.123 66.667 25.64 25.64 39.99 5.01
476 593 3.122971 GCTAAACGGACCGTGCCC 61.123 66.667 22.53 5.89 39.99 5.36
986 1155 4.102113 CCCTTTTGGCCAGGTCTG 57.898 61.111 5.11 0.00 38.58 3.51
1061 1241 3.043418 CGGGGAAAGTAAGGGGATTCTA 58.957 50.000 0.00 0.00 0.00 2.10
1062 1242 3.071167 CGGGGAAAGTAAGGGGATTCTAG 59.929 52.174 0.00 0.00 0.00 2.43
1063 1243 3.394940 GGGGAAAGTAAGGGGATTCTAGG 59.605 52.174 0.00 0.00 0.00 3.02
1064 1244 3.394940 GGGAAAGTAAGGGGATTCTAGGG 59.605 52.174 0.00 0.00 0.00 3.53
1065 1245 4.045736 GGAAAGTAAGGGGATTCTAGGGT 58.954 47.826 0.00 0.00 0.00 4.34
1067 1247 5.397672 GGAAAGTAAGGGGATTCTAGGGTTC 60.398 48.000 0.00 0.00 0.00 3.62
1252 1749 4.451150 GACTCGCCATGGCCACGA 62.451 66.667 30.79 20.49 37.98 4.35
1478 1985 4.435436 CGTGCGCTACCTGCTCCA 62.435 66.667 9.73 0.00 40.11 3.86
1626 2133 3.474600 CTCTAAGCACATGAATCCCCAG 58.525 50.000 0.00 0.00 0.00 4.45
1632 2139 1.212688 CACATGAATCCCCAGCACCTA 59.787 52.381 0.00 0.00 0.00 3.08
1703 2210 4.091075 CGCGATCCAGAATGACATCAATAG 59.909 45.833 0.00 0.00 39.69 1.73
1728 2242 0.815734 CCTCTGTATTCGACCCACGT 59.184 55.000 0.00 0.00 43.13 4.49
1830 2360 0.527817 CATCCTCCGTCGTGCCTTAC 60.528 60.000 0.00 0.00 0.00 2.34
1983 2516 1.281925 ATGGCCCCTTCGATCCTGTT 61.282 55.000 0.00 0.00 0.00 3.16
2394 2937 6.016276 ACCACATTACCAGAAAGATGTTTCAC 60.016 38.462 16.80 0.00 44.08 3.18
2464 3010 1.956170 AAGCTCTGCCGTCGTGTTG 60.956 57.895 0.00 0.00 0.00 3.33
2557 3118 7.704472 CCTCATACAGAGTTAGTTCATCTTGAC 59.296 40.741 0.00 0.00 43.12 3.18
2671 3243 3.565902 TCATGTTATTTGTGGCGTCAACA 59.434 39.130 0.00 0.00 0.00 3.33
2770 3342 1.066858 TGGCAAGTCGAAGAGATGGAC 60.067 52.381 0.00 0.00 36.95 4.02
2874 3449 1.206132 CCACAGCCACGACAAGGTATA 59.794 52.381 0.00 0.00 0.00 1.47
3196 4007 1.538876 TCCCAAGCTACCACTGGCT 60.539 57.895 0.00 0.00 40.85 4.75
3243 4070 4.550669 TGGTCATCCACATCTGATCTACT 58.449 43.478 0.00 0.00 39.03 2.57
3244 4071 4.586421 TGGTCATCCACATCTGATCTACTC 59.414 45.833 0.00 0.00 39.03 2.59
3245 4072 4.021544 GGTCATCCACATCTGATCTACTCC 60.022 50.000 0.00 0.00 0.00 3.85
3246 4073 4.021544 GTCATCCACATCTGATCTACTCCC 60.022 50.000 0.00 0.00 0.00 4.30
3247 4074 3.981516 TCCACATCTGATCTACTCCCT 57.018 47.619 0.00 0.00 0.00 4.20
3248 4075 3.838565 TCCACATCTGATCTACTCCCTC 58.161 50.000 0.00 0.00 0.00 4.30
3249 4076 3.465210 TCCACATCTGATCTACTCCCTCT 59.535 47.826 0.00 0.00 0.00 3.69
3250 4077 3.573538 CCACATCTGATCTACTCCCTCTG 59.426 52.174 0.00 0.00 0.00 3.35
3251 4078 4.214310 CACATCTGATCTACTCCCTCTGT 58.786 47.826 0.00 0.00 0.00 3.41
3252 4079 4.278170 CACATCTGATCTACTCCCTCTGTC 59.722 50.000 0.00 0.00 0.00 3.51
3253 4080 3.586470 TCTGATCTACTCCCTCTGTCC 57.414 52.381 0.00 0.00 0.00 4.02
3254 4081 2.175931 TCTGATCTACTCCCTCTGTCCC 59.824 54.545 0.00 0.00 0.00 4.46
3255 4082 1.930204 TGATCTACTCCCTCTGTCCCA 59.070 52.381 0.00 0.00 0.00 4.37
3256 4083 2.314852 TGATCTACTCCCTCTGTCCCAA 59.685 50.000 0.00 0.00 0.00 4.12
3257 4084 3.245984 TGATCTACTCCCTCTGTCCCAAA 60.246 47.826 0.00 0.00 0.00 3.28
3258 4085 3.269592 TCTACTCCCTCTGTCCCAAAA 57.730 47.619 0.00 0.00 0.00 2.44
3259 4086 3.803340 TCTACTCCCTCTGTCCCAAAAT 58.197 45.455 0.00 0.00 0.00 1.82
3260 4087 4.955335 TCTACTCCCTCTGTCCCAAAATA 58.045 43.478 0.00 0.00 0.00 1.40
3261 4088 5.538877 TCTACTCCCTCTGTCCCAAAATAT 58.461 41.667 0.00 0.00 0.00 1.28
3262 4089 6.689561 TCTACTCCCTCTGTCCCAAAATATA 58.310 40.000 0.00 0.00 0.00 0.86
3263 4090 7.136885 TCTACTCCCTCTGTCCCAAAATATAA 58.863 38.462 0.00 0.00 0.00 0.98
3264 4091 6.253946 ACTCCCTCTGTCCCAAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
3265 4092 5.970640 ACTCCCTCTGTCCCAAAATATAAGA 59.029 40.000 0.00 0.00 0.00 2.10
3266 4093 6.447084 ACTCCCTCTGTCCCAAAATATAAGAA 59.553 38.462 0.00 0.00 0.00 2.52
3267 4094 6.659824 TCCCTCTGTCCCAAAATATAAGAAC 58.340 40.000 0.00 0.00 0.00 3.01
3268 4095 6.447084 TCCCTCTGTCCCAAAATATAAGAACT 59.553 38.462 0.00 0.00 0.00 3.01
3269 4096 7.036863 TCCCTCTGTCCCAAAATATAAGAACTT 60.037 37.037 0.00 0.00 0.00 2.66
3270 4097 7.615757 CCCTCTGTCCCAAAATATAAGAACTTT 59.384 37.037 0.00 0.00 0.00 2.66
3271 4098 9.025041 CCTCTGTCCCAAAATATAAGAACTTTT 57.975 33.333 0.00 0.00 0.00 2.27
3301 4128 7.269477 ACTACACTAGTGTTAGAAACGTTCT 57.731 36.000 32.15 6.43 41.83 3.01
3302 4129 7.710896 ACTACACTAGTGTTAGAAACGTTCTT 58.289 34.615 32.15 5.99 41.83 2.52
3303 4130 8.840321 ACTACACTAGTGTTAGAAACGTTCTTA 58.160 33.333 32.15 9.27 41.83 2.10
3304 4131 9.837525 CTACACTAGTGTTAGAAACGTTCTTAT 57.162 33.333 32.15 4.96 41.83 1.73
3315 4142 7.941795 AGAAACGTTCTTATATTATGGGACG 57.058 36.000 0.00 9.33 36.36 4.79
3316 4143 6.927381 AGAAACGTTCTTATATTATGGGACGG 59.073 38.462 0.00 1.76 36.36 4.79
3317 4144 6.409524 AACGTTCTTATATTATGGGACGGA 57.590 37.500 0.00 0.00 0.00 4.69
3318 4145 6.022163 ACGTTCTTATATTATGGGACGGAG 57.978 41.667 13.18 0.00 0.00 4.63
3319 4146 5.047519 ACGTTCTTATATTATGGGACGGAGG 60.048 44.000 13.18 0.00 0.00 4.30
3320 4147 5.623824 CGTTCTTATATTATGGGACGGAGGG 60.624 48.000 0.00 0.00 0.00 4.30
3321 4148 5.279562 TCTTATATTATGGGACGGAGGGA 57.720 43.478 0.00 0.00 0.00 4.20
3322 4149 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
3323 4150 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
3324 4151 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
3325 4152 2.077687 TTATGGGACGGAGGGAGTAC 57.922 55.000 0.00 0.00 0.00 2.73
3651 4713 7.639162 AACTTGTGAGTAATACTTGTCGAAG 57.361 36.000 0.00 0.00 34.21 3.79
3746 4814 4.536065 ACAAACGTTGTGCATGAGTATTG 58.464 39.130 0.00 0.00 43.48 1.90
3828 4903 7.715657 AGAATGTTTCTTTGTGTTGCTTATCA 58.284 30.769 0.00 0.00 36.36 2.15
3829 4904 7.864379 AGAATGTTTCTTTGTGTTGCTTATCAG 59.136 33.333 0.00 0.00 36.36 2.90
3830 4905 6.449635 TGTTTCTTTGTGTTGCTTATCAGT 57.550 33.333 0.00 0.00 0.00 3.41
3831 4906 6.862209 TGTTTCTTTGTGTTGCTTATCAGTT 58.138 32.000 0.00 0.00 0.00 3.16
3832 4907 7.319646 TGTTTCTTTGTGTTGCTTATCAGTTT 58.680 30.769 0.00 0.00 0.00 2.66
3833 4908 7.816995 TGTTTCTTTGTGTTGCTTATCAGTTTT 59.183 29.630 0.00 0.00 0.00 2.43
3834 4909 8.655970 GTTTCTTTGTGTTGCTTATCAGTTTTT 58.344 29.630 0.00 0.00 0.00 1.94
3892 4967 5.752036 ATGAATCTTGACCTGAGTTCAGA 57.248 39.130 10.64 0.00 46.59 3.27
4002 5082 7.151308 CCTGTTGTTAGGAAATTGCACATTTA 58.849 34.615 6.78 0.00 40.42 1.40
4118 5331 3.070446 TCGTCTTGTGTTGGAGTGGTAAT 59.930 43.478 0.00 0.00 0.00 1.89
4178 5403 0.972883 GGGAGCCCTATGTCAGCTAG 59.027 60.000 0.00 0.00 36.87 3.42
4199 5424 5.065704 AGTGCACTATCACTGAGTACTTG 57.934 43.478 20.16 0.00 44.88 3.16
4322 5580 9.065722 AGGAAATGGTTAGGGTATAAAGTTACT 57.934 33.333 0.00 0.00 0.00 2.24
4420 5702 8.767085 CAGAAATGTCATTTTGCAATTACTTGT 58.233 29.630 12.04 0.00 31.84 3.16
4698 5987 0.947244 CGTCCAGGGCATTAGATTGC 59.053 55.000 0.00 0.00 42.01 3.56
4708 5997 2.031682 GCATTAGATTGCGTGGGACATC 60.032 50.000 0.00 0.00 34.52 3.06
4804 6107 0.544357 TGAATCCGAGTGAGGTGGGT 60.544 55.000 0.00 0.00 0.00 4.51
4870 6177 4.881273 TGTACGGCAAATCAAGATATTGCT 59.119 37.500 19.42 10.45 46.54 3.91
4914 6221 2.276732 TTTCTGCTTTGCTGTAGCCT 57.723 45.000 0.80 0.00 41.18 4.58
4917 6224 2.699954 TCTGCTTTGCTGTAGCCTAAC 58.300 47.619 0.80 0.00 41.18 2.34
4918 6225 2.303022 TCTGCTTTGCTGTAGCCTAACT 59.697 45.455 0.80 0.00 41.18 2.24
4919 6226 2.417933 CTGCTTTGCTGTAGCCTAACTG 59.582 50.000 0.80 0.00 41.18 3.16
4920 6227 1.131315 GCTTTGCTGTAGCCTAACTGC 59.869 52.381 0.80 6.43 42.67 4.40
4921 6228 1.740025 CTTTGCTGTAGCCTAACTGCC 59.260 52.381 0.80 0.00 41.94 4.85
5029 7069 3.265791 GTTGGGAGTATTCTGACTGCAG 58.734 50.000 13.48 13.48 39.40 4.41
5048 7088 3.484229 GCAGAGCAACATTACATCGTCAC 60.484 47.826 0.00 0.00 0.00 3.67
5049 7089 3.928992 CAGAGCAACATTACATCGTCACT 59.071 43.478 0.00 0.00 0.00 3.41
5050 7090 5.102313 CAGAGCAACATTACATCGTCACTA 58.898 41.667 0.00 0.00 0.00 2.74
5051 7091 5.230936 CAGAGCAACATTACATCGTCACTAG 59.769 44.000 0.00 0.00 0.00 2.57
5052 7092 5.125578 AGAGCAACATTACATCGTCACTAGA 59.874 40.000 0.00 0.00 0.00 2.43
5062 7102 3.630892 TCGTCACTAGACTAGAAGGCT 57.369 47.619 16.55 0.00 42.73 4.58
5070 7110 0.610687 GACTAGAAGGCTGTGGTGCT 59.389 55.000 0.00 0.00 0.00 4.40
5083 7123 2.581354 GTGCTCCGATGTGCCTCT 59.419 61.111 0.00 0.00 0.00 3.69
5090 7130 3.149981 CTCCGATGTGCCTCTATCTACA 58.850 50.000 0.00 0.00 0.00 2.74
5091 7131 3.761218 CTCCGATGTGCCTCTATCTACAT 59.239 47.826 0.00 0.00 36.54 2.29
5092 7132 3.507622 TCCGATGTGCCTCTATCTACATG 59.492 47.826 0.00 0.00 34.18 3.21
5096 7136 3.570540 TGTGCCTCTATCTACATGCTCT 58.429 45.455 0.00 0.00 0.00 4.09
5097 7137 3.963374 TGTGCCTCTATCTACATGCTCTT 59.037 43.478 0.00 0.00 0.00 2.85
5139 7339 8.853126 TCTGCATGCTAATTTTAATTCAGCTAT 58.147 29.630 20.33 0.00 33.38 2.97
5151 7351 3.717400 TTCAGCTATCTTACAGCGAGG 57.283 47.619 0.00 0.00 43.97 4.63
5214 7414 7.612633 TGTAGGTGGACAAATAATTCCCTAAAC 59.387 37.037 0.00 0.00 0.00 2.01
5238 7438 9.906660 AACTCGAATTTGCTATTAATTTTCACA 57.093 25.926 0.00 0.00 0.00 3.58
5294 7495 4.204012 CTCAGGTGGTTTTTGAGTGGTAA 58.796 43.478 0.00 0.00 34.92 2.85
5297 7498 4.582656 CAGGTGGTTTTTGAGTGGTAATGA 59.417 41.667 0.00 0.00 0.00 2.57
5336 7537 9.575868 TTCAAAAACAGAAGTGGTATTGGTATA 57.424 29.630 0.00 0.00 0.00 1.47
5337 7538 9.575868 TCAAAAACAGAAGTGGTATTGGTATAA 57.424 29.630 0.00 0.00 0.00 0.98
5340 7541 8.519799 AAACAGAAGTGGTATTGGTATAATGG 57.480 34.615 0.00 0.00 0.00 3.16
5341 7542 7.208064 ACAGAAGTGGTATTGGTATAATGGT 57.792 36.000 0.00 0.00 0.00 3.55
5342 7543 8.326765 ACAGAAGTGGTATTGGTATAATGGTA 57.673 34.615 0.00 0.00 0.00 3.25
5343 7544 8.945193 ACAGAAGTGGTATTGGTATAATGGTAT 58.055 33.333 0.00 0.00 0.00 2.73
5344 7545 9.793259 CAGAAGTGGTATTGGTATAATGGTATT 57.207 33.333 0.00 0.00 0.00 1.89
5345 7546 9.793259 AGAAGTGGTATTGGTATAATGGTATTG 57.207 33.333 0.00 0.00 0.00 1.90
5346 7547 8.934023 AAGTGGTATTGGTATAATGGTATTGG 57.066 34.615 0.00 0.00 0.00 3.16
5347 7548 8.052621 AGTGGTATTGGTATAATGGTATTGGT 57.947 34.615 0.00 0.00 0.00 3.67
5360 7561 3.829601 TGGTATTGGTTTGGATGTTGACC 59.170 43.478 0.00 0.00 0.00 4.02
5384 7585 1.308069 ATCCAGTTGACGTGGCATGC 61.308 55.000 9.90 9.90 34.77 4.06
5473 7685 5.232463 GTGTTTTGACCCTTCTCGTATACA 58.768 41.667 3.32 0.00 0.00 2.29
5478 7690 7.989416 TTTGACCCTTCTCGTATACAAATTT 57.011 32.000 3.32 0.00 0.00 1.82
5484 7696 9.151177 ACCCTTCTCGTATACAAATTTAGGATA 57.849 33.333 3.32 0.00 0.00 2.59
5496 7708 5.397553 AATTTAGGATATGACCCCGGTTT 57.602 39.130 0.00 0.00 0.00 3.27
5499 7711 2.418669 AGGATATGACCCCGGTTTGAT 58.581 47.619 0.00 0.00 0.00 2.57
5500 7712 2.783510 AGGATATGACCCCGGTTTGATT 59.216 45.455 0.00 0.00 0.00 2.57
5501 7713 3.204382 AGGATATGACCCCGGTTTGATTT 59.796 43.478 0.00 0.00 0.00 2.17
5502 7714 3.958147 GGATATGACCCCGGTTTGATTTT 59.042 43.478 0.00 0.00 0.00 1.82
5503 7715 4.404394 GGATATGACCCCGGTTTGATTTTT 59.596 41.667 0.00 0.00 0.00 1.94
5533 7745 5.084519 GGGATTTGACCCTTTTTCTTACCT 58.915 41.667 0.00 0.00 45.90 3.08
5558 7770 1.208776 GGTTGCTGTCGGTAGGGTTAT 59.791 52.381 0.00 0.00 0.00 1.89
5580 7900 1.090052 AGCCGAGCAGTTATTTCGCC 61.090 55.000 0.00 0.00 33.25 5.54
5589 7909 1.996748 TTATTTCGCCCGACCCCCT 60.997 57.895 0.00 0.00 0.00 4.79
5614 7934 0.253630 TGCCTATCTTCCCACCCCTT 60.254 55.000 0.00 0.00 0.00 3.95
5620 7940 1.857348 CTTCCCACCCCTTCCCCTT 60.857 63.158 0.00 0.00 0.00 3.95
5622 7942 3.728373 CCCACCCCTTCCCCTTCG 61.728 72.222 0.00 0.00 0.00 3.79
5641 7961 2.914379 CCGTCGGCAGTTTCTTTCT 58.086 52.632 0.00 0.00 0.00 2.52
5648 7970 1.618837 GGCAGTTTCTTTCTTTCCCCC 59.381 52.381 0.00 0.00 0.00 5.40
5712 8034 3.611530 CGGATCTTCACCGTTTTTGCATT 60.612 43.478 0.00 0.00 44.57 3.56
5721 8043 2.775149 CCGTTTTTGCATTGTTTTTGCG 59.225 40.909 0.00 0.00 43.10 4.85
5733 8055 1.737793 GTTTTTGCGGATCGAGATGGT 59.262 47.619 0.00 0.00 0.00 3.55
5748 8070 2.498078 AGATGGTCCCGAAGAGAGAAAC 59.502 50.000 0.00 0.00 0.00 2.78
5761 8083 2.492484 GAGAGAAACGTAAGCTCCTCCA 59.508 50.000 8.17 0.00 45.62 3.86
5766 8088 0.460311 ACGTAAGCTCCTCCAATCCG 59.540 55.000 0.00 0.00 45.62 4.18
5777 8099 2.236395 CCTCCAATCCGTCCAAGTAGTT 59.764 50.000 0.00 0.00 0.00 2.24
5782 8104 4.226761 CAATCCGTCCAAGTAGTTTTTGC 58.773 43.478 0.00 0.00 0.00 3.68
5803 8125 2.163818 AACTTGCTTCCGATTCGACA 57.836 45.000 7.83 0.00 0.00 4.35
5848 8170 8.964772 CCTCATCTTTTTGAACTTAGATTGGAT 58.035 33.333 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.478288 GGGAGGAAGGATGCTTGATGG 60.478 57.143 3.35 0.00 0.00 3.51
1 2 1.213678 TGGGAGGAAGGATGCTTGATG 59.786 52.381 3.35 0.00 0.00 3.07
2 3 1.213926 GTGGGAGGAAGGATGCTTGAT 59.786 52.381 3.35 0.00 0.00 2.57
3 4 0.620556 GTGGGAGGAAGGATGCTTGA 59.379 55.000 3.35 0.00 0.00 3.02
4 5 0.745845 CGTGGGAGGAAGGATGCTTG 60.746 60.000 3.35 0.00 0.00 4.01
5 6 1.604378 CGTGGGAGGAAGGATGCTT 59.396 57.895 0.00 0.00 0.00 3.91
6 7 3.036429 GCGTGGGAGGAAGGATGCT 62.036 63.158 0.00 0.00 0.00 3.79
7 8 2.514824 GCGTGGGAGGAAGGATGC 60.515 66.667 0.00 0.00 0.00 3.91
8 9 1.144936 GAGCGTGGGAGGAAGGATG 59.855 63.158 0.00 0.00 0.00 3.51
9 10 2.066999 GGAGCGTGGGAGGAAGGAT 61.067 63.158 0.00 0.00 0.00 3.24
10 11 2.683933 GGAGCGTGGGAGGAAGGA 60.684 66.667 0.00 0.00 0.00 3.36
11 12 3.787001 GGGAGCGTGGGAGGAAGG 61.787 72.222 0.00 0.00 0.00 3.46
12 13 2.685380 AGGGAGCGTGGGAGGAAG 60.685 66.667 0.00 0.00 0.00 3.46
13 14 3.003173 CAGGGAGCGTGGGAGGAA 61.003 66.667 0.00 0.00 0.00 3.36
32 33 2.866085 GAAGGATGCAGCGCTGAGGT 62.866 60.000 40.21 23.89 0.00 3.85
33 34 2.124819 AAGGATGCAGCGCTGAGG 60.125 61.111 40.21 15.76 0.00 3.86
34 35 0.743701 AAGAAGGATGCAGCGCTGAG 60.744 55.000 40.21 16.60 0.00 3.35
35 36 0.742281 GAAGAAGGATGCAGCGCTGA 60.742 55.000 40.21 24.64 0.00 4.26
36 37 1.712977 GGAAGAAGGATGCAGCGCTG 61.713 60.000 32.83 32.83 0.00 5.18
37 38 1.451028 GGAAGAAGGATGCAGCGCT 60.451 57.895 2.64 2.64 0.00 5.92
38 39 1.451028 AGGAAGAAGGATGCAGCGC 60.451 57.895 0.00 0.00 0.00 5.92
39 40 1.094073 CCAGGAAGAAGGATGCAGCG 61.094 60.000 0.00 0.00 0.00 5.18
40 41 0.254178 TCCAGGAAGAAGGATGCAGC 59.746 55.000 0.00 0.00 0.00 5.25
41 42 1.746516 GCTCCAGGAAGAAGGATGCAG 60.747 57.143 0.00 0.00 32.53 4.41
42 43 0.254178 GCTCCAGGAAGAAGGATGCA 59.746 55.000 0.00 0.00 32.53 3.96
43 44 0.465278 GGCTCCAGGAAGAAGGATGC 60.465 60.000 0.00 0.00 32.53 3.91
44 45 0.914644 TGGCTCCAGGAAGAAGGATG 59.085 55.000 0.00 0.00 32.53 3.51
45 46 0.915364 GTGGCTCCAGGAAGAAGGAT 59.085 55.000 0.00 0.00 32.53 3.24
46 47 1.201429 GGTGGCTCCAGGAAGAAGGA 61.201 60.000 0.00 0.00 35.97 3.36
47 48 1.301293 GGTGGCTCCAGGAAGAAGG 59.699 63.158 0.00 0.00 35.97 3.46
48 49 2.069776 TGGTGGCTCCAGGAAGAAG 58.930 57.895 3.73 0.00 41.93 2.85
49 50 4.330056 TGGTGGCTCCAGGAAGAA 57.670 55.556 3.73 0.00 41.93 2.52
60 61 2.973082 GGTTTGAGGCATGGTGGC 59.027 61.111 0.00 0.00 44.10 5.01
61 62 2.342650 CCGGTTTGAGGCATGGTGG 61.343 63.158 0.00 0.00 0.00 4.61
62 63 0.893270 TTCCGGTTTGAGGCATGGTG 60.893 55.000 0.00 0.00 0.00 4.17
63 64 0.893727 GTTCCGGTTTGAGGCATGGT 60.894 55.000 0.00 0.00 0.00 3.55
64 65 1.595093 GGTTCCGGTTTGAGGCATGG 61.595 60.000 0.00 0.00 0.00 3.66
65 66 1.595093 GGGTTCCGGTTTGAGGCATG 61.595 60.000 0.00 0.00 0.00 4.06
66 67 1.304134 GGGTTCCGGTTTGAGGCAT 60.304 57.895 0.00 0.00 0.00 4.40
67 68 2.114411 GGGTTCCGGTTTGAGGCA 59.886 61.111 0.00 0.00 0.00 4.75
68 69 2.675423 GGGGTTCCGGTTTGAGGC 60.675 66.667 0.00 0.00 0.00 4.70
69 70 2.035155 GGGGGTTCCGGTTTGAGG 59.965 66.667 0.00 0.00 0.00 3.86
78 79 2.141448 GGAGGAGATCGGGGGTTCC 61.141 68.421 0.00 0.00 0.00 3.62
79 80 2.141448 GGGAGGAGATCGGGGGTTC 61.141 68.421 0.00 0.00 0.00 3.62
80 81 2.040779 GGGAGGAGATCGGGGGTT 60.041 66.667 0.00 0.00 0.00 4.11
81 82 4.173701 GGGGAGGAGATCGGGGGT 62.174 72.222 0.00 0.00 0.00 4.95
82 83 4.964241 GGGGGAGGAGATCGGGGG 62.964 77.778 0.00 0.00 0.00 5.40
113 114 0.251341 ATTGTCTGCACCCAGGGAAC 60.251 55.000 14.54 3.71 39.61 3.62
114 115 0.251297 CATTGTCTGCACCCAGGGAA 60.251 55.000 14.54 0.00 39.61 3.97
115 116 1.133181 TCATTGTCTGCACCCAGGGA 61.133 55.000 14.54 0.00 39.61 4.20
116 117 0.962356 GTCATTGTCTGCACCCAGGG 60.962 60.000 2.85 2.85 39.61 4.45
117 118 1.300971 CGTCATTGTCTGCACCCAGG 61.301 60.000 0.00 0.00 39.61 4.45
118 119 1.300971 CCGTCATTGTCTGCACCCAG 61.301 60.000 0.00 0.00 40.54 4.45
119 120 1.302431 CCGTCATTGTCTGCACCCA 60.302 57.895 0.00 0.00 0.00 4.51
120 121 2.040544 CCCGTCATTGTCTGCACCC 61.041 63.158 0.00 0.00 0.00 4.61
121 122 2.690778 GCCCGTCATTGTCTGCACC 61.691 63.158 0.00 0.00 0.00 5.01
122 123 1.672356 AGCCCGTCATTGTCTGCAC 60.672 57.895 0.00 0.00 0.00 4.57
123 124 1.672030 CAGCCCGTCATTGTCTGCA 60.672 57.895 0.00 0.00 0.00 4.41
124 125 0.745845 ATCAGCCCGTCATTGTCTGC 60.746 55.000 0.00 0.00 0.00 4.26
125 126 1.012086 CATCAGCCCGTCATTGTCTG 58.988 55.000 0.00 0.00 0.00 3.51
126 127 0.107508 CCATCAGCCCGTCATTGTCT 60.108 55.000 0.00 0.00 0.00 3.41
127 128 0.392998 ACCATCAGCCCGTCATTGTC 60.393 55.000 0.00 0.00 0.00 3.18
128 129 0.392998 GACCATCAGCCCGTCATTGT 60.393 55.000 0.00 0.00 0.00 2.71
129 130 0.392863 TGACCATCAGCCCGTCATTG 60.393 55.000 0.00 0.00 31.74 2.82
130 131 0.107508 CTGACCATCAGCCCGTCATT 60.108 55.000 0.00 0.00 37.72 2.57
131 132 0.977627 TCTGACCATCAGCCCGTCAT 60.978 55.000 0.74 0.00 43.95 3.06
132 133 1.607801 CTCTGACCATCAGCCCGTCA 61.608 60.000 0.74 0.00 43.95 4.35
133 134 1.142748 CTCTGACCATCAGCCCGTC 59.857 63.158 0.74 0.00 43.95 4.79
134 135 1.610673 ACTCTGACCATCAGCCCGT 60.611 57.895 0.74 0.00 43.95 5.28
135 136 1.153489 CACTCTGACCATCAGCCCG 60.153 63.158 0.74 0.00 43.95 6.13
136 137 0.107945 GTCACTCTGACCATCAGCCC 60.108 60.000 0.74 0.00 43.95 5.19
137 138 0.459237 CGTCACTCTGACCATCAGCC 60.459 60.000 0.74 0.00 44.20 4.85
138 139 0.528017 TCGTCACTCTGACCATCAGC 59.472 55.000 0.74 0.00 44.20 4.26
139 140 1.133982 CCTCGTCACTCTGACCATCAG 59.866 57.143 0.00 0.00 44.20 2.90
140 141 1.177401 CCTCGTCACTCTGACCATCA 58.823 55.000 0.00 0.00 44.20 3.07
141 142 1.464734 TCCTCGTCACTCTGACCATC 58.535 55.000 0.00 0.00 44.20 3.51
142 143 1.924731 TTCCTCGTCACTCTGACCAT 58.075 50.000 0.00 0.00 44.20 3.55
143 144 1.546029 CATTCCTCGTCACTCTGACCA 59.454 52.381 0.00 0.00 44.20 4.02
144 145 1.737363 GCATTCCTCGTCACTCTGACC 60.737 57.143 0.00 0.00 44.20 4.02
145 146 1.634702 GCATTCCTCGTCACTCTGAC 58.365 55.000 0.00 0.00 43.65 3.51
146 147 0.532573 GGCATTCCTCGTCACTCTGA 59.467 55.000 0.00 0.00 0.00 3.27
147 148 0.803768 CGGCATTCCTCGTCACTCTG 60.804 60.000 0.00 0.00 0.00 3.35
148 149 1.251527 ACGGCATTCCTCGTCACTCT 61.252 55.000 0.00 0.00 34.20 3.24
149 150 0.389948 AACGGCATTCCTCGTCACTC 60.390 55.000 0.00 0.00 38.78 3.51
150 151 0.034896 AAACGGCATTCCTCGTCACT 59.965 50.000 0.00 0.00 38.78 3.41
151 152 1.717194 TAAACGGCATTCCTCGTCAC 58.283 50.000 0.00 0.00 38.78 3.67
152 153 2.459060 TTAAACGGCATTCCTCGTCA 57.541 45.000 0.00 0.00 38.78 4.35
153 154 3.485633 GTTTTAAACGGCATTCCTCGTC 58.514 45.455 0.00 0.00 38.78 4.20
154 155 3.547649 GTTTTAAACGGCATTCCTCGT 57.452 42.857 0.00 0.00 41.71 4.18
166 167 2.225727 CCCAGAGCTCACCGTTTTAAAC 59.774 50.000 17.77 0.00 0.00 2.01
167 168 2.105134 TCCCAGAGCTCACCGTTTTAAA 59.895 45.455 17.77 0.00 0.00 1.52
168 169 1.695242 TCCCAGAGCTCACCGTTTTAA 59.305 47.619 17.77 0.00 0.00 1.52
169 170 1.344065 TCCCAGAGCTCACCGTTTTA 58.656 50.000 17.77 0.00 0.00 1.52
170 171 0.472471 TTCCCAGAGCTCACCGTTTT 59.528 50.000 17.77 0.00 0.00 2.43
171 172 0.250338 GTTCCCAGAGCTCACCGTTT 60.250 55.000 17.77 0.00 0.00 3.60
172 173 1.371558 GTTCCCAGAGCTCACCGTT 59.628 57.895 17.77 0.00 0.00 4.44
173 174 2.584391 GGTTCCCAGAGCTCACCGT 61.584 63.158 17.77 0.00 0.00 4.83
174 175 1.903877 ATGGTTCCCAGAGCTCACCG 61.904 60.000 17.77 3.53 36.75 4.94
175 176 0.329596 AATGGTTCCCAGAGCTCACC 59.670 55.000 17.77 14.58 36.75 4.02
176 177 1.003580 TGAATGGTTCCCAGAGCTCAC 59.996 52.381 17.77 4.40 36.75 3.51
177 178 1.003580 GTGAATGGTTCCCAGAGCTCA 59.996 52.381 17.77 0.00 36.75 4.26
178 179 1.003580 TGTGAATGGTTCCCAGAGCTC 59.996 52.381 5.27 5.27 36.75 4.09
179 180 1.067295 TGTGAATGGTTCCCAGAGCT 58.933 50.000 0.00 0.00 36.75 4.09
180 181 1.168714 GTGTGAATGGTTCCCAGAGC 58.831 55.000 0.00 0.00 36.75 4.09
181 182 1.073763 TGGTGTGAATGGTTCCCAGAG 59.926 52.381 0.00 0.00 36.75 3.35
182 183 1.144691 TGGTGTGAATGGTTCCCAGA 58.855 50.000 0.00 0.00 36.75 3.86
183 184 2.094675 GATGGTGTGAATGGTTCCCAG 58.905 52.381 0.00 0.00 36.75 4.45
184 185 1.710244 AGATGGTGTGAATGGTTCCCA 59.290 47.619 0.00 0.00 38.19 4.37
185 186 2.493278 CAAGATGGTGTGAATGGTTCCC 59.507 50.000 0.00 0.00 0.00 3.97
186 187 2.094545 GCAAGATGGTGTGAATGGTTCC 60.095 50.000 0.00 0.00 0.00 3.62
187 188 2.557924 TGCAAGATGGTGTGAATGGTTC 59.442 45.455 0.00 0.00 0.00 3.62
188 189 2.596346 TGCAAGATGGTGTGAATGGTT 58.404 42.857 0.00 0.00 0.00 3.67
189 190 2.291209 TGCAAGATGGTGTGAATGGT 57.709 45.000 0.00 0.00 0.00 3.55
190 191 3.880047 AATGCAAGATGGTGTGAATGG 57.120 42.857 0.00 0.00 0.00 3.16
191 192 3.369756 GCAAATGCAAGATGGTGTGAATG 59.630 43.478 0.00 0.00 41.59 2.67
192 193 3.592059 GCAAATGCAAGATGGTGTGAAT 58.408 40.909 0.00 0.00 41.59 2.57
193 194 2.607526 CGCAAATGCAAGATGGTGTGAA 60.608 45.455 6.18 0.00 42.21 3.18
194 195 1.068402 CGCAAATGCAAGATGGTGTGA 60.068 47.619 6.18 0.00 42.21 3.58
195 196 1.342555 CGCAAATGCAAGATGGTGTG 58.657 50.000 6.18 0.00 42.21 3.82
196 197 0.244450 CCGCAAATGCAAGATGGTGT 59.756 50.000 6.18 0.00 42.21 4.16
197 198 0.244450 ACCGCAAATGCAAGATGGTG 59.756 50.000 6.18 0.00 42.21 4.17
198 199 0.968405 AACCGCAAATGCAAGATGGT 59.032 45.000 6.18 1.30 42.21 3.55
199 200 1.352114 CAACCGCAAATGCAAGATGG 58.648 50.000 6.18 0.66 42.21 3.51
200 201 0.717224 GCAACCGCAAATGCAAGATG 59.283 50.000 6.18 2.74 42.12 2.90
201 202 0.604578 AGCAACCGCAAATGCAAGAT 59.395 45.000 6.18 0.00 44.95 2.40
202 203 0.039256 GAGCAACCGCAAATGCAAGA 60.039 50.000 6.18 0.00 44.95 3.02
203 204 0.038892 AGAGCAACCGCAAATGCAAG 60.039 50.000 6.18 0.00 44.95 4.01
204 205 0.388659 AAGAGCAACCGCAAATGCAA 59.611 45.000 6.18 0.00 44.95 4.08
205 206 0.039256 GAAGAGCAACCGCAAATGCA 60.039 50.000 6.18 0.00 44.95 3.96
206 207 0.242017 AGAAGAGCAACCGCAAATGC 59.758 50.000 0.00 0.00 42.27 3.56
207 208 2.030893 TGAAGAAGAGCAACCGCAAATG 60.031 45.455 0.00 0.00 42.27 2.32
208 209 2.229792 TGAAGAAGAGCAACCGCAAAT 58.770 42.857 0.00 0.00 42.27 2.32
209 210 1.674359 TGAAGAAGAGCAACCGCAAA 58.326 45.000 0.00 0.00 42.27 3.68
213 214 3.806521 CCATCTATGAAGAAGAGCAACCG 59.193 47.826 0.00 0.00 34.73 4.44
216 217 4.471025 TGGTCCATCTATGAAGAAGAGCAA 59.529 41.667 7.71 0.00 40.62 3.91
229 230 1.810151 GCAAACGCTTTGGTCCATCTA 59.190 47.619 10.89 0.00 40.94 1.98
231 232 3.107017 GCAAACGCTTTGGTCCATC 57.893 52.632 10.89 0.00 40.94 3.51
275 276 1.280710 ACACCCGATGCAGTAAATGGA 59.719 47.619 0.00 0.00 0.00 3.41
292 293 1.805945 CCCGAGCTCGCTTACACAC 60.806 63.158 30.49 0.00 38.18 3.82
293 294 2.571757 CCCGAGCTCGCTTACACA 59.428 61.111 30.49 0.00 38.18 3.72
338 455 1.379527 CTTTTATCGGTGAGGCCCAC 58.620 55.000 14.11 14.11 44.95 4.61
371 488 0.189822 ACCTCCTCCTCCTCCATAGC 59.810 60.000 0.00 0.00 0.00 2.97
372 489 3.623703 CGATACCTCCTCCTCCTCCATAG 60.624 56.522 0.00 0.00 0.00 2.23
373 490 2.309162 CGATACCTCCTCCTCCTCCATA 59.691 54.545 0.00 0.00 0.00 2.74
374 491 1.076350 CGATACCTCCTCCTCCTCCAT 59.924 57.143 0.00 0.00 0.00 3.41
375 492 0.478942 CGATACCTCCTCCTCCTCCA 59.521 60.000 0.00 0.00 0.00 3.86
376 493 0.251430 CCGATACCTCCTCCTCCTCC 60.251 65.000 0.00 0.00 0.00 4.30
377 494 0.251430 CCCGATACCTCCTCCTCCTC 60.251 65.000 0.00 0.00 0.00 3.71
378 495 0.701659 TCCCGATACCTCCTCCTCCT 60.702 60.000 0.00 0.00 0.00 3.69
396 513 1.583054 CCGTTTGGCCAGCTATAGTC 58.417 55.000 5.11 0.00 0.00 2.59
397 514 0.180406 CCCGTTTGGCCAGCTATAGT 59.820 55.000 5.11 0.00 0.00 2.12
398 515 3.006672 CCCGTTTGGCCAGCTATAG 57.993 57.895 5.11 0.00 0.00 1.31
408 525 4.726304 TTAGCCCGGCCCGTTTGG 62.726 66.667 5.55 0.00 37.09 3.28
409 526 2.673687 TTTAGCCCGGCCCGTTTG 60.674 61.111 5.55 0.00 0.00 2.93
410 527 2.674033 GTTTAGCCCGGCCCGTTT 60.674 61.111 5.55 0.00 0.00 3.60
411 528 3.912745 CTGTTTAGCCCGGCCCGTT 62.913 63.158 5.55 0.00 0.00 4.44
412 529 4.404098 CTGTTTAGCCCGGCCCGT 62.404 66.667 5.55 0.00 0.00 5.28
421 538 2.893682 ATCGGGCTGGCCTGTTTAGC 62.894 60.000 18.81 7.51 42.88 3.09
422 539 1.097547 CATCGGGCTGGCCTGTTTAG 61.098 60.000 18.81 1.32 42.88 1.85
423 540 1.077787 CATCGGGCTGGCCTGTTTA 60.078 57.895 18.81 1.87 42.88 2.01
424 541 2.361610 CATCGGGCTGGCCTGTTT 60.362 61.111 18.81 6.59 42.88 2.83
425 542 4.431131 CCATCGGGCTGGCCTGTT 62.431 66.667 18.81 9.01 42.88 3.16
448 565 4.097863 GTTTAGCCCGTGCCGTGC 62.098 66.667 0.00 0.00 38.69 5.34
449 566 3.784412 CGTTTAGCCCGTGCCGTG 61.784 66.667 0.00 0.00 38.69 4.94
451 568 4.745751 TCCGTTTAGCCCGTGCCG 62.746 66.667 0.00 0.00 38.69 5.69
452 569 3.122971 GTCCGTTTAGCCCGTGCC 61.123 66.667 0.00 0.00 38.69 5.01
453 570 3.122971 GGTCCGTTTAGCCCGTGC 61.123 66.667 0.00 0.00 37.95 5.34
454 571 2.812178 CGGTCCGTTTAGCCCGTG 60.812 66.667 2.08 0.00 35.78 4.94
456 573 2.812178 CACGGTCCGTTTAGCCCG 60.812 66.667 15.97 0.00 45.72 6.13
457 574 3.122971 GCACGGTCCGTTTAGCCC 61.123 66.667 15.97 0.00 38.32 5.19
458 575 3.122971 GGCACGGTCCGTTTAGCC 61.123 66.667 23.77 23.77 38.32 3.93
459 576 3.122971 GGGCACGGTCCGTTTAGC 61.123 66.667 15.97 15.41 38.32 3.09
460 577 2.812178 CGGGCACGGTCCGTTTAG 60.812 66.667 15.97 4.86 46.58 1.85
969 1138 0.040204 ATCAGACCTGGCCAAAAGGG 59.960 55.000 7.01 7.12 39.30 3.95
970 1139 1.467920 GATCAGACCTGGCCAAAAGG 58.532 55.000 7.01 7.56 40.93 3.11
971 1140 1.089920 CGATCAGACCTGGCCAAAAG 58.910 55.000 7.01 0.35 0.00 2.27
972 1141 0.322456 CCGATCAGACCTGGCCAAAA 60.322 55.000 7.01 0.00 0.00 2.44
973 1142 1.299648 CCGATCAGACCTGGCCAAA 59.700 57.895 7.01 0.00 0.00 3.28
974 1143 2.669133 CCCGATCAGACCTGGCCAA 61.669 63.158 7.01 0.00 0.00 4.52
975 1144 3.083349 CCCGATCAGACCTGGCCA 61.083 66.667 4.71 4.71 0.00 5.36
976 1145 2.764128 TCCCGATCAGACCTGGCC 60.764 66.667 0.00 0.00 0.00 5.36
977 1146 2.022240 GAGTCCCGATCAGACCTGGC 62.022 65.000 8.82 0.00 34.67 4.85
978 1147 0.396417 AGAGTCCCGATCAGACCTGG 60.396 60.000 8.82 0.00 34.67 4.45
979 1148 1.407258 GAAGAGTCCCGATCAGACCTG 59.593 57.143 8.82 0.00 34.67 4.00
980 1149 1.286553 AGAAGAGTCCCGATCAGACCT 59.713 52.381 8.82 4.39 34.67 3.85
981 1150 1.679153 GAGAAGAGTCCCGATCAGACC 59.321 57.143 8.82 2.52 34.67 3.85
982 1151 2.370349 TGAGAAGAGTCCCGATCAGAC 58.630 52.381 4.99 4.99 34.31 3.51
983 1152 2.808906 TGAGAAGAGTCCCGATCAGA 57.191 50.000 0.00 0.00 0.00 3.27
984 1153 3.020274 TCTTGAGAAGAGTCCCGATCAG 58.980 50.000 0.00 0.00 32.71 2.90
985 1154 3.087370 TCTTGAGAAGAGTCCCGATCA 57.913 47.619 0.00 0.00 32.71 2.92
986 1155 4.457834 TTTCTTGAGAAGAGTCCCGATC 57.542 45.455 0.00 0.00 39.03 3.69
1016 1185 4.635473 TCTCTCCCCCACAATATTCTTCT 58.365 43.478 0.00 0.00 0.00 2.85
1062 1242 1.646367 GGGAGGGGATGAAGGAACCC 61.646 65.000 0.00 0.00 43.69 4.11
1063 1243 0.919289 TGGGAGGGGATGAAGGAACC 60.919 60.000 0.00 0.00 0.00 3.62
1064 1244 0.548510 CTGGGAGGGGATGAAGGAAC 59.451 60.000 0.00 0.00 0.00 3.62
1065 1245 0.421495 TCTGGGAGGGGATGAAGGAA 59.579 55.000 0.00 0.00 0.00 3.36
1067 1247 0.769873 CATCTGGGAGGGGATGAAGG 59.230 60.000 0.00 0.00 41.05 3.46
1252 1749 5.413309 ACGAAGATCTCCTCTTTGAATGT 57.587 39.130 8.79 0.00 45.07 2.71
1626 2133 1.078848 CCAGGTGCTGACTAGGTGC 60.079 63.158 0.00 0.00 32.44 5.01
1703 2210 3.259902 GGGTCGAATACAGAGGTGAAAC 58.740 50.000 0.00 0.00 0.00 2.78
1759 2282 1.070601 AGCAAAATCAAGGGGTTGCAC 59.929 47.619 9.62 0.00 46.92 4.57
1803 2326 1.296715 GACGGAGGATGGCAACTGT 59.703 57.895 0.00 0.00 37.61 3.55
1830 2360 1.191535 TCATGGACTGGTAAGGTCGG 58.808 55.000 0.00 0.00 34.82 4.79
1878 2408 2.504367 GCAAGTGCCTTGAGGTAGAAA 58.496 47.619 16.28 0.00 43.42 2.52
1983 2516 5.718724 TTGTGTTGATAATGATGTTGGCA 57.281 34.783 0.00 0.00 0.00 4.92
2464 3010 8.981647 GTGCATCCATTGGTCAATTTTATATTC 58.018 33.333 1.86 0.00 0.00 1.75
2599 3166 2.752144 GCAAGGAGCGAATCAATGAG 57.248 50.000 0.00 0.00 0.00 2.90
2671 3243 2.578021 ACTCAGGGCCAGACACATTATT 59.422 45.455 6.18 0.00 0.00 1.40
2770 3342 4.321718 TCAGCAAAGAAGAGTTCTGGATG 58.678 43.478 0.00 0.00 40.59 3.51
3150 3960 7.148407 GGAACACTATTGATGTACTGGTTTCAG 60.148 40.741 0.00 0.00 46.10 3.02
3196 4007 5.105473 GGACTAAGATAGTGGTGCTTACACA 60.105 44.000 8.32 0.00 43.32 3.72
3243 4070 6.447084 AGTTCTTATATTTTGGGACAGAGGGA 59.553 38.462 0.00 0.00 42.39 4.20
3244 4071 6.663734 AGTTCTTATATTTTGGGACAGAGGG 58.336 40.000 0.00 0.00 42.39 4.30
3245 4072 8.581253 AAAGTTCTTATATTTTGGGACAGAGG 57.419 34.615 0.00 0.00 42.39 3.69
3277 4104 7.269477 AGAACGTTTCTAACACTAGTGTAGT 57.731 36.000 28.13 16.41 39.19 2.73
3278 4105 9.837525 ATAAGAACGTTTCTAACACTAGTGTAG 57.162 33.333 28.13 22.40 40.28 2.74
3289 4116 9.467258 CGTCCCATAATATAAGAACGTTTCTAA 57.533 33.333 0.46 0.00 39.61 2.10
3290 4117 8.084073 CCGTCCCATAATATAAGAACGTTTCTA 58.916 37.037 0.46 0.00 39.61 2.10
3291 4118 6.927381 CCGTCCCATAATATAAGAACGTTTCT 59.073 38.462 0.46 0.00 43.15 2.52
3292 4119 6.925165 TCCGTCCCATAATATAAGAACGTTTC 59.075 38.462 0.46 0.00 0.00 2.78
3293 4120 6.819284 TCCGTCCCATAATATAAGAACGTTT 58.181 36.000 0.46 0.00 0.00 3.60
3294 4121 6.409524 TCCGTCCCATAATATAAGAACGTT 57.590 37.500 0.00 0.00 0.00 3.99
3295 4122 5.047519 CCTCCGTCCCATAATATAAGAACGT 60.048 44.000 0.00 0.00 0.00 3.99
3296 4123 5.408356 CCTCCGTCCCATAATATAAGAACG 58.592 45.833 0.00 0.00 0.00 3.95
3297 4124 5.482878 TCCCTCCGTCCCATAATATAAGAAC 59.517 44.000 0.00 0.00 0.00 3.01
3298 4125 5.657446 TCCCTCCGTCCCATAATATAAGAA 58.343 41.667 0.00 0.00 0.00 2.52
3299 4126 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3300 4127 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3301 4128 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3302 4129 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3303 4130 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3304 4131 3.140707 TGTACTCCCTCCGTCCCATAATA 59.859 47.826 0.00 0.00 0.00 0.98
3305 4132 2.090943 TGTACTCCCTCCGTCCCATAAT 60.091 50.000 0.00 0.00 0.00 1.28
3306 4133 1.288633 TGTACTCCCTCCGTCCCATAA 59.711 52.381 0.00 0.00 0.00 1.90
3307 4134 0.928505 TGTACTCCCTCCGTCCCATA 59.071 55.000 0.00 0.00 0.00 2.74
3308 4135 0.264955 ATGTACTCCCTCCGTCCCAT 59.735 55.000 0.00 0.00 0.00 4.00
3309 4136 0.042131 AATGTACTCCCTCCGTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
3310 4137 0.751452 GAATGTACTCCCTCCGTCCC 59.249 60.000 0.00 0.00 0.00 4.46
3311 4138 1.777941 AGAATGTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
3312 4139 4.737055 GCTTTAGAATGTACTCCCTCCGTC 60.737 50.000 0.00 0.00 0.00 4.79
3313 4140 3.132467 GCTTTAGAATGTACTCCCTCCGT 59.868 47.826 0.00 0.00 0.00 4.69
3314 4141 3.385111 AGCTTTAGAATGTACTCCCTCCG 59.615 47.826 0.00 0.00 0.00 4.63
3315 4142 4.500035 CGAGCTTTAGAATGTACTCCCTCC 60.500 50.000 0.00 0.00 0.00 4.30
3316 4143 4.500035 CCGAGCTTTAGAATGTACTCCCTC 60.500 50.000 0.00 0.00 0.00 4.30
3317 4144 3.385111 CCGAGCTTTAGAATGTACTCCCT 59.615 47.826 0.00 0.00 0.00 4.20
3318 4145 3.383825 TCCGAGCTTTAGAATGTACTCCC 59.616 47.826 0.00 0.00 0.00 4.30
3319 4146 4.650754 TCCGAGCTTTAGAATGTACTCC 57.349 45.455 0.00 0.00 0.00 3.85
3320 4147 5.593010 ACATCCGAGCTTTAGAATGTACTC 58.407 41.667 0.00 0.00 0.00 2.59
3321 4148 5.599999 ACATCCGAGCTTTAGAATGTACT 57.400 39.130 0.00 0.00 0.00 2.73
3322 4149 5.810587 TGAACATCCGAGCTTTAGAATGTAC 59.189 40.000 0.00 0.00 0.00 2.90
3323 4150 5.972935 TGAACATCCGAGCTTTAGAATGTA 58.027 37.500 0.00 0.00 0.00 2.29
3324 4151 4.832248 TGAACATCCGAGCTTTAGAATGT 58.168 39.130 0.00 0.00 0.00 2.71
3325 4152 5.122239 TGTTGAACATCCGAGCTTTAGAATG 59.878 40.000 0.00 0.00 0.00 2.67
3430 4461 9.314321 CAGATTCGGTAGTTCATTATTACAAGT 57.686 33.333 0.00 0.00 0.00 3.16
3651 4713 8.398878 ACTTTAGTCTATCTATACCAGCAGTC 57.601 38.462 0.00 0.00 0.00 3.51
3688 4752 3.826157 TGGTTGAGACAAAATGATGGGAC 59.174 43.478 0.00 0.00 0.00 4.46
3690 4754 4.559153 GTTGGTTGAGACAAAATGATGGG 58.441 43.478 0.00 0.00 0.00 4.00
3746 4814 8.462143 TTGATGTTCGTAATCTTGAGTACTTC 57.538 34.615 0.00 0.00 0.00 3.01
3865 4940 9.605275 CTGAACTCAGGTCAAGATTCATTATAA 57.395 33.333 0.00 0.00 40.20 0.98
3875 4950 5.928976 TCAAAATCTGAACTCAGGTCAAGA 58.071 37.500 6.87 0.00 43.91 3.02
3876 4951 5.762218 ACTCAAAATCTGAACTCAGGTCAAG 59.238 40.000 6.87 0.00 43.91 3.02
3877 4952 5.684704 ACTCAAAATCTGAACTCAGGTCAA 58.315 37.500 6.87 0.00 43.91 3.18
3881 4956 4.276678 TGCAACTCAAAATCTGAACTCAGG 59.723 41.667 6.87 0.00 43.91 3.86
3883 4958 6.712095 AGTATGCAACTCAAAATCTGAACTCA 59.288 34.615 0.00 0.00 30.33 3.41
3892 4967 9.199982 CTTCAAATGAAGTATGCAACTCAAAAT 57.800 29.630 13.75 0.00 44.80 1.82
4002 5082 9.014297 CCACTTGAATGAACTTTAAGAACCTAT 57.986 33.333 0.00 0.00 34.82 2.57
4118 5331 5.826643 AGATGGGGTTTTCAGCAAACTATA 58.173 37.500 0.00 0.00 43.95 1.31
4178 5403 4.810790 ACAAGTACTCAGTGATAGTGCAC 58.189 43.478 9.40 9.40 39.05 4.57
4199 5424 6.863126 ACTAAAAACAAGTCTGCAATGCATAC 59.137 34.615 14.77 14.77 38.13 2.39
4431 5713 9.330063 CATCAAAGACTTTAGCATAACCTATCA 57.670 33.333 0.00 0.00 0.00 2.15
4698 5987 0.176680 CTTCTCCCAGATGTCCCACG 59.823 60.000 0.00 0.00 0.00 4.94
4708 5997 3.307506 AGATCCAGTCATCTTCTCCCAG 58.692 50.000 0.00 0.00 27.71 4.45
4804 6107 4.083696 GCTTGTTAGTAACGCTAGCCAAAA 60.084 41.667 9.66 0.00 30.93 2.44
4870 6177 1.637553 ACGGGTAGGACCTCAGACTTA 59.362 52.381 0.00 0.00 38.64 2.24
4914 6221 8.698210 TCCGAAATATCTTAACTTAGGCAGTTA 58.302 33.333 0.00 0.00 44.56 2.24
4917 6224 7.711339 ACTTCCGAAATATCTTAACTTAGGCAG 59.289 37.037 0.00 0.00 0.00 4.85
4918 6225 7.562135 ACTTCCGAAATATCTTAACTTAGGCA 58.438 34.615 0.00 0.00 0.00 4.75
4919 6226 7.709613 TGACTTCCGAAATATCTTAACTTAGGC 59.290 37.037 0.00 0.00 0.00 3.93
4920 6227 9.765795 ATGACTTCCGAAATATCTTAACTTAGG 57.234 33.333 0.00 0.00 0.00 2.69
5029 7069 5.230306 GTCTAGTGACGATGTAATGTTGCTC 59.770 44.000 0.00 0.00 33.15 4.26
5048 7088 2.159170 GCACCACAGCCTTCTAGTCTAG 60.159 54.545 0.00 0.00 0.00 2.43
5049 7089 1.825474 GCACCACAGCCTTCTAGTCTA 59.175 52.381 0.00 0.00 0.00 2.59
5050 7090 0.610687 GCACCACAGCCTTCTAGTCT 59.389 55.000 0.00 0.00 0.00 3.24
5051 7091 0.610687 AGCACCACAGCCTTCTAGTC 59.389 55.000 0.00 0.00 34.23 2.59
5052 7092 0.610687 GAGCACCACAGCCTTCTAGT 59.389 55.000 0.00 0.00 34.23 2.57
5062 7102 2.358615 GCACATCGGAGCACCACA 60.359 61.111 0.00 0.00 35.59 4.17
5070 7110 3.223674 TGTAGATAGAGGCACATCGGA 57.776 47.619 0.00 0.00 0.00 4.55
5139 7339 2.290071 CCCCTTTTTCCTCGCTGTAAGA 60.290 50.000 0.00 0.00 34.07 2.10
5164 7364 4.555262 ACATTTGGCGGTGAAAAATACTG 58.445 39.130 0.00 0.00 0.00 2.74
5214 7414 8.798153 GGTGTGAAAATTAATAGCAAATTCGAG 58.202 33.333 0.00 0.00 0.00 4.04
5238 7438 5.968254 ACCTTGTTTTAAAAATGTGACGGT 58.032 33.333 1.31 0.71 0.00 4.83
5336 7537 5.046663 GGTCAACATCCAAACCAATACCATT 60.047 40.000 0.00 0.00 0.00 3.16
5337 7538 4.466015 GGTCAACATCCAAACCAATACCAT 59.534 41.667 0.00 0.00 0.00 3.55
5338 7539 3.829601 GGTCAACATCCAAACCAATACCA 59.170 43.478 0.00 0.00 0.00 3.25
5339 7540 4.086457 AGGTCAACATCCAAACCAATACC 58.914 43.478 0.00 0.00 34.09 2.73
5340 7541 5.722021 AAGGTCAACATCCAAACCAATAC 57.278 39.130 0.00 0.00 34.09 1.89
5341 7542 5.835819 TCAAAGGTCAACATCCAAACCAATA 59.164 36.000 0.00 0.00 34.09 1.90
5342 7543 4.653341 TCAAAGGTCAACATCCAAACCAAT 59.347 37.500 0.00 0.00 34.09 3.16
5343 7544 4.026744 TCAAAGGTCAACATCCAAACCAA 58.973 39.130 0.00 0.00 34.09 3.67
5344 7545 3.636679 TCAAAGGTCAACATCCAAACCA 58.363 40.909 0.00 0.00 34.09 3.67
5345 7546 4.321974 GGATCAAAGGTCAACATCCAAACC 60.322 45.833 0.00 0.00 34.27 3.27
5346 7547 4.280677 TGGATCAAAGGTCAACATCCAAAC 59.719 41.667 0.00 0.00 40.07 2.93
5347 7548 4.478203 TGGATCAAAGGTCAACATCCAAA 58.522 39.130 0.00 0.00 40.07 3.28
5360 7561 1.197721 GCCACGTCAACTGGATCAAAG 59.802 52.381 0.00 0.00 0.00 2.77
5391 7592 1.672356 GAAGCTGCCTTCCGCTCAA 60.672 57.895 0.00 0.00 41.30 3.02
5412 7624 2.346803 GGCTATATCGTCGTACGGGTA 58.653 52.381 16.52 0.78 42.81 3.69
5442 7654 5.972935 AGAAGGGTCAAAACACGAAATTTT 58.027 33.333 0.00 0.00 32.44 1.82
5473 7685 5.397553 AACCGGGGTCATATCCTAAATTT 57.602 39.130 6.32 0.00 0.00 1.82
5478 7690 3.049108 TCAAACCGGGGTCATATCCTA 57.951 47.619 6.32 0.00 0.00 2.94
5516 7728 3.073946 CCTGGAGGTAAGAAAAAGGGTCA 59.926 47.826 0.00 0.00 0.00 4.02
5517 7729 3.561528 CCCTGGAGGTAAGAAAAAGGGTC 60.562 52.174 0.00 0.00 38.47 4.46
5533 7745 1.534476 TACCGACAGCAACCCTGGA 60.534 57.895 0.00 0.00 46.14 3.86
5540 7752 3.098377 TGTATAACCCTACCGACAGCAA 58.902 45.455 0.00 0.00 0.00 3.91
5541 7753 2.691526 CTGTATAACCCTACCGACAGCA 59.308 50.000 0.00 0.00 0.00 4.41
5546 7758 1.133823 TCGGCTGTATAACCCTACCGA 60.134 52.381 0.00 0.00 45.18 4.69
5558 7770 2.536365 CGAAATAACTGCTCGGCTGTA 58.464 47.619 8.39 0.63 39.66 2.74
5589 7909 2.078665 GGGAAGATAGGCAGGGGCA 61.079 63.158 0.00 0.00 43.71 5.36
5592 7912 1.709994 GGGTGGGAAGATAGGCAGGG 61.710 65.000 0.00 0.00 0.00 4.45
5599 7919 0.328158 GGGGAAGGGGTGGGAAGATA 60.328 60.000 0.00 0.00 0.00 1.98
5648 7970 4.150454 AGGGAGAGAGGGGCGAGG 62.150 72.222 0.00 0.00 0.00 4.63
5662 7984 1.217689 AGTGGAGGAGATGAGAGAGGG 59.782 57.143 0.00 0.00 0.00 4.30
5695 8017 4.856115 AAACAATGCAAAAACGGTGAAG 57.144 36.364 0.00 0.00 0.00 3.02
5702 8024 4.008539 TCCGCAAAAACAATGCAAAAAC 57.991 36.364 0.00 0.00 44.01 2.43
5703 8025 4.551603 CGATCCGCAAAAACAATGCAAAAA 60.552 37.500 0.00 0.00 44.01 1.94
5708 8030 1.913403 CTCGATCCGCAAAAACAATGC 59.087 47.619 0.00 0.00 40.41 3.56
5712 8034 1.737236 CCATCTCGATCCGCAAAAACA 59.263 47.619 0.00 0.00 0.00 2.83
5721 8043 4.175988 TCGGGACCATCTCGATCC 57.824 61.111 0.00 0.00 45.56 3.36
5733 8055 2.094854 GCTTACGTTTCTCTCTTCGGGA 60.095 50.000 0.00 0.00 0.00 5.14
5748 8070 0.460311 ACGGATTGGAGGAGCTTACG 59.540 55.000 0.00 0.00 0.00 3.18
5761 8083 3.886505 TGCAAAAACTACTTGGACGGATT 59.113 39.130 0.00 0.00 0.00 3.01
5766 8088 6.331170 CAAGTTTGCAAAAACTACTTGGAC 57.669 37.500 24.01 7.10 41.76 4.02
5782 8104 2.223144 TGTCGAATCGGAAGCAAGTTTG 59.777 45.455 1.76 0.00 0.00 2.93
5803 8125 6.855763 TGAGGGATTTCAAGCAAATAATGT 57.144 33.333 0.00 0.00 34.60 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.