Multiple sequence alignment - TraesCS2B01G474100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G474100 chr2B 100.000 3419 0 0 1 3419 671087096 671083678 0.000000e+00 6314
1 TraesCS2B01G474100 chr2B 91.273 550 37 4 2871 3419 31214107 31214646 0.000000e+00 739
2 TraesCS2B01G474100 chr2D 93.022 2207 80 27 692 2865 561913890 561911725 0.000000e+00 3155
3 TraesCS2B01G474100 chr2D 90.391 562 31 7 2871 3419 608262446 608261895 0.000000e+00 717
4 TraesCS2B01G474100 chr2D 88.455 563 41 12 2866 3419 613513441 613513988 0.000000e+00 658
5 TraesCS2B01G474100 chr5A 90.199 1959 98 43 692 2605 601976063 601977972 0.000000e+00 2468
6 TraesCS2B01G474100 chr2A 89.450 1962 108 45 692 2605 702112053 702113963 0.000000e+00 2385
7 TraesCS2B01G474100 chr3B 91.421 711 37 8 1 687 804547298 804546588 0.000000e+00 953
8 TraesCS2B01G474100 chr3B 94.353 549 30 1 2871 3419 814062277 814061730 0.000000e+00 841
9 TraesCS2B01G474100 chr3B 81.852 270 22 14 68 312 28605718 28605451 5.790000e-48 202
10 TraesCS2B01G474100 chr7B 91.818 550 41 2 2871 3419 9781697 9781151 0.000000e+00 763
11 TraesCS2B01G474100 chr5B 91.863 553 36 4 2871 3419 537999054 537999601 0.000000e+00 763
12 TraesCS2B01G474100 chr5B 75.702 605 73 48 113 689 410726069 410725511 5.700000e-58 235
13 TraesCS2B01G474100 chr1B 91.636 550 37 5 2869 3413 392497890 392498435 0.000000e+00 752
14 TraesCS2B01G474100 chr6D 90.054 553 37 13 2871 3415 391532217 391531675 0.000000e+00 701
15 TraesCS2B01G474100 chr7D 89.228 557 40 10 2867 3419 616399209 616399749 0.000000e+00 678
16 TraesCS2B01G474100 chrUn 91.030 301 27 0 12 312 44703767 44704067 1.140000e-109 407
17 TraesCS2B01G474100 chr3A 87.302 252 23 2 68 312 748341674 748341923 2.600000e-71 279
18 TraesCS2B01G474100 chr3D 81.962 316 39 8 13 312 615458167 615458480 5.660000e-63 252
19 TraesCS2B01G474100 chr6B 73.402 485 66 32 234 686 599047510 599047963 4.630000e-24 122


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G474100 chr2B 671083678 671087096 3418 True 6314 6314 100.000 1 3419 1 chr2B.!!$R1 3418
1 TraesCS2B01G474100 chr2B 31214107 31214646 539 False 739 739 91.273 2871 3419 1 chr2B.!!$F1 548
2 TraesCS2B01G474100 chr2D 561911725 561913890 2165 True 3155 3155 93.022 692 2865 1 chr2D.!!$R1 2173
3 TraesCS2B01G474100 chr2D 608261895 608262446 551 True 717 717 90.391 2871 3419 1 chr2D.!!$R2 548
4 TraesCS2B01G474100 chr2D 613513441 613513988 547 False 658 658 88.455 2866 3419 1 chr2D.!!$F1 553
5 TraesCS2B01G474100 chr5A 601976063 601977972 1909 False 2468 2468 90.199 692 2605 1 chr5A.!!$F1 1913
6 TraesCS2B01G474100 chr2A 702112053 702113963 1910 False 2385 2385 89.450 692 2605 1 chr2A.!!$F1 1913
7 TraesCS2B01G474100 chr3B 804546588 804547298 710 True 953 953 91.421 1 687 1 chr3B.!!$R2 686
8 TraesCS2B01G474100 chr3B 814061730 814062277 547 True 841 841 94.353 2871 3419 1 chr3B.!!$R3 548
9 TraesCS2B01G474100 chr7B 9781151 9781697 546 True 763 763 91.818 2871 3419 1 chr7B.!!$R1 548
10 TraesCS2B01G474100 chr5B 537999054 537999601 547 False 763 763 91.863 2871 3419 1 chr5B.!!$F1 548
11 TraesCS2B01G474100 chr5B 410725511 410726069 558 True 235 235 75.702 113 689 1 chr5B.!!$R1 576
12 TraesCS2B01G474100 chr1B 392497890 392498435 545 False 752 752 91.636 2869 3413 1 chr1B.!!$F1 544
13 TraesCS2B01G474100 chr6D 391531675 391532217 542 True 701 701 90.054 2871 3415 1 chr6D.!!$R1 544
14 TraesCS2B01G474100 chr7D 616399209 616399749 540 False 678 678 89.228 2867 3419 1 chr7D.!!$F1 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
485 486 0.034960 CTGGAGTCTGGAGGTCGAGA 60.035 60.0 0.0 0.0 0.0 4.04 F
1112 1163 0.108138 CACTCCATCTCCGGTTGTCC 60.108 60.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1779 1885 0.386858 TCTGCGAGTTGAGCACGTAC 60.387 55.0 0.00 0.0 40.01 3.67 R
2782 3008 0.458716 GGAAGAGGAAAGAGCGGTCG 60.459 60.0 9.28 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 5.670792 ATCTGCAATCCATCACACAAAAT 57.329 34.783 0.00 0.00 0.00 1.82
50 51 5.063180 TCTGCAATCCATCACACAAAATC 57.937 39.130 0.00 0.00 0.00 2.17
51 52 4.768448 TCTGCAATCCATCACACAAAATCT 59.232 37.500 0.00 0.00 0.00 2.40
52 53 5.063180 TGCAATCCATCACACAAAATCTC 57.937 39.130 0.00 0.00 0.00 2.75
53 54 4.523558 TGCAATCCATCACACAAAATCTCA 59.476 37.500 0.00 0.00 0.00 3.27
54 55 4.860907 GCAATCCATCACACAAAATCTCAC 59.139 41.667 0.00 0.00 0.00 3.51
55 56 5.336213 GCAATCCATCACACAAAATCTCACT 60.336 40.000 0.00 0.00 0.00 3.41
56 57 6.127925 GCAATCCATCACACAAAATCTCACTA 60.128 38.462 0.00 0.00 0.00 2.74
57 58 7.575532 GCAATCCATCACACAAAATCTCACTAA 60.576 37.037 0.00 0.00 0.00 2.24
58 59 8.298854 CAATCCATCACACAAAATCTCACTAAA 58.701 33.333 0.00 0.00 0.00 1.85
59 60 7.815840 TCCATCACACAAAATCTCACTAAAA 57.184 32.000 0.00 0.00 0.00 1.52
60 61 8.408043 TCCATCACACAAAATCTCACTAAAAT 57.592 30.769 0.00 0.00 0.00 1.82
61 62 8.514594 TCCATCACACAAAATCTCACTAAAATC 58.485 33.333 0.00 0.00 0.00 2.17
62 63 8.298854 CCATCACACAAAATCTCACTAAAATCA 58.701 33.333 0.00 0.00 0.00 2.57
63 64 9.121517 CATCACACAAAATCTCACTAAAATCAC 57.878 33.333 0.00 0.00 0.00 3.06
64 65 8.450578 TCACACAAAATCTCACTAAAATCACT 57.549 30.769 0.00 0.00 0.00 3.41
65 66 8.344831 TCACACAAAATCTCACTAAAATCACTG 58.655 33.333 0.00 0.00 0.00 3.66
66 67 7.592533 CACACAAAATCTCACTAAAATCACTGG 59.407 37.037 0.00 0.00 0.00 4.00
67 68 7.502226 ACACAAAATCTCACTAAAATCACTGGA 59.498 33.333 0.00 0.00 0.00 3.86
68 69 8.517878 CACAAAATCTCACTAAAATCACTGGAT 58.482 33.333 0.00 0.00 34.43 3.41
69 70 9.082313 ACAAAATCTCACTAAAATCACTGGATT 57.918 29.630 0.00 0.00 45.57 3.01
84 85 9.717942 AATCACTGGATTATAGATTGCTAAGTC 57.282 33.333 0.00 0.00 41.89 3.01
85 86 8.250143 TCACTGGATTATAGATTGCTAAGTCA 57.750 34.615 0.00 0.00 0.00 3.41
86 87 8.874156 TCACTGGATTATAGATTGCTAAGTCAT 58.126 33.333 0.00 0.00 0.00 3.06
87 88 9.499479 CACTGGATTATAGATTGCTAAGTCATT 57.501 33.333 0.00 0.00 0.00 2.57
88 89 9.717942 ACTGGATTATAGATTGCTAAGTCATTC 57.282 33.333 0.00 0.00 0.00 2.67
89 90 9.941325 CTGGATTATAGATTGCTAAGTCATTCT 57.059 33.333 0.00 0.00 33.08 2.40
90 91 9.935241 TGGATTATAGATTGCTAAGTCATTCTC 57.065 33.333 0.00 0.00 31.51 2.87
96 97 9.896645 ATAGATTGCTAAGTCATTCTCTGAAAA 57.103 29.630 0.00 0.00 35.07 2.29
97 98 8.804912 AGATTGCTAAGTCATTCTCTGAAAAT 57.195 30.769 0.00 0.00 35.07 1.82
98 99 8.675504 AGATTGCTAAGTCATTCTCTGAAAATG 58.324 33.333 0.00 0.00 35.07 2.32
99 100 7.984422 TTGCTAAGTCATTCTCTGAAAATGA 57.016 32.000 2.35 2.35 40.03 2.57
122 123 6.601613 TGACACTAAAATTCAGAAACACACCT 59.398 34.615 0.00 0.00 0.00 4.00
123 124 7.027778 ACACTAAAATTCAGAAACACACCTC 57.972 36.000 0.00 0.00 0.00 3.85
144 145 1.301401 CCGTTCGTCTTTGGGAGCA 60.301 57.895 0.00 0.00 0.00 4.26
150 151 3.915437 TCGTCTTTGGGAGCATTTTTC 57.085 42.857 0.00 0.00 0.00 2.29
152 153 3.502211 TCGTCTTTGGGAGCATTTTTCTC 59.498 43.478 0.00 0.00 0.00 2.87
153 154 3.503748 CGTCTTTGGGAGCATTTTTCTCT 59.496 43.478 0.00 0.00 0.00 3.10
154 155 4.022849 CGTCTTTGGGAGCATTTTTCTCTT 60.023 41.667 0.00 0.00 0.00 2.85
155 156 5.465051 GTCTTTGGGAGCATTTTTCTCTTC 58.535 41.667 0.00 0.00 0.00 2.87
156 157 4.524328 TCTTTGGGAGCATTTTTCTCTTCC 59.476 41.667 0.00 0.00 0.00 3.46
157 158 3.814504 TGGGAGCATTTTTCTCTTCCT 57.185 42.857 0.00 0.00 0.00 3.36
158 159 3.424703 TGGGAGCATTTTTCTCTTCCTG 58.575 45.455 0.00 0.00 0.00 3.86
159 160 3.181429 TGGGAGCATTTTTCTCTTCCTGT 60.181 43.478 0.00 0.00 0.00 4.00
160 161 3.441922 GGGAGCATTTTTCTCTTCCTGTC 59.558 47.826 0.00 0.00 0.00 3.51
161 162 3.441922 GGAGCATTTTTCTCTTCCTGTCC 59.558 47.826 0.00 0.00 0.00 4.02
162 163 4.074970 GAGCATTTTTCTCTTCCTGTCCA 58.925 43.478 0.00 0.00 0.00 4.02
163 164 4.670765 AGCATTTTTCTCTTCCTGTCCAT 58.329 39.130 0.00 0.00 0.00 3.41
164 165 4.704057 AGCATTTTTCTCTTCCTGTCCATC 59.296 41.667 0.00 0.00 0.00 3.51
165 166 4.704057 GCATTTTTCTCTTCCTGTCCATCT 59.296 41.667 0.00 0.00 0.00 2.90
166 167 5.184671 GCATTTTTCTCTTCCTGTCCATCTT 59.815 40.000 0.00 0.00 0.00 2.40
167 168 6.624642 GCATTTTTCTCTTCCTGTCCATCTTC 60.625 42.308 0.00 0.00 0.00 2.87
168 169 3.876274 TTCTCTTCCTGTCCATCTTCG 57.124 47.619 0.00 0.00 0.00 3.79
169 170 2.808919 TCTCTTCCTGTCCATCTTCGT 58.191 47.619 0.00 0.00 0.00 3.85
170 171 2.755655 TCTCTTCCTGTCCATCTTCGTC 59.244 50.000 0.00 0.00 0.00 4.20
171 172 2.493675 CTCTTCCTGTCCATCTTCGTCA 59.506 50.000 0.00 0.00 0.00 4.35
172 173 2.493675 TCTTCCTGTCCATCTTCGTCAG 59.506 50.000 0.00 0.00 0.00 3.51
173 174 2.215942 TCCTGTCCATCTTCGTCAGA 57.784 50.000 0.00 0.00 35.33 3.27
174 175 2.525368 TCCTGTCCATCTTCGTCAGAA 58.475 47.619 0.00 0.00 34.16 3.02
175 176 3.099905 TCCTGTCCATCTTCGTCAGAAT 58.900 45.455 0.00 0.00 34.16 2.40
176 177 3.118992 TCCTGTCCATCTTCGTCAGAATG 60.119 47.826 0.00 0.00 34.16 2.67
177 178 2.606725 CTGTCCATCTTCGTCAGAATGC 59.393 50.000 0.00 0.00 34.16 3.56
178 179 1.936547 GTCCATCTTCGTCAGAATGCC 59.063 52.381 0.00 0.00 34.16 4.40
179 180 0.933097 CCATCTTCGTCAGAATGCCG 59.067 55.000 0.00 0.00 34.16 5.69
180 181 0.933097 CATCTTCGTCAGAATGCCGG 59.067 55.000 0.00 0.00 34.16 6.13
181 182 0.824109 ATCTTCGTCAGAATGCCGGA 59.176 50.000 5.05 0.00 34.16 5.14
182 183 0.824109 TCTTCGTCAGAATGCCGGAT 59.176 50.000 5.05 0.00 35.56 4.18
183 184 0.933097 CTTCGTCAGAATGCCGGATG 59.067 55.000 5.05 0.00 35.56 3.51
184 185 0.249120 TTCGTCAGAATGCCGGATGT 59.751 50.000 5.05 0.00 34.76 3.06
185 186 0.179111 TCGTCAGAATGCCGGATGTC 60.179 55.000 5.05 0.00 34.76 3.06
186 187 1.482621 CGTCAGAATGCCGGATGTCG 61.483 60.000 5.05 0.90 34.76 4.35
187 188 1.521457 TCAGAATGCCGGATGTCGC 60.521 57.895 5.05 0.00 34.76 5.19
188 189 1.522355 CAGAATGCCGGATGTCGCT 60.522 57.895 5.05 0.00 37.59 4.93
189 190 0.249447 CAGAATGCCGGATGTCGCTA 60.249 55.000 5.05 0.00 37.59 4.26
190 191 0.249489 AGAATGCCGGATGTCGCTAC 60.249 55.000 5.05 0.00 37.59 3.58
191 192 0.249489 GAATGCCGGATGTCGCTACT 60.249 55.000 5.05 0.00 37.59 2.57
192 193 0.530650 AATGCCGGATGTCGCTACTG 60.531 55.000 5.05 0.00 37.59 2.74
193 194 2.962253 GCCGGATGTCGCTACTGC 60.962 66.667 5.05 0.00 37.59 4.40
194 195 2.808315 CCGGATGTCGCTACTGCT 59.192 61.111 0.00 0.00 37.59 4.24
195 196 1.589993 CCGGATGTCGCTACTGCTG 60.590 63.158 0.00 0.00 37.59 4.41
196 197 1.589993 CGGATGTCGCTACTGCTGG 60.590 63.158 0.00 0.00 36.97 4.85
197 198 1.884926 GGATGTCGCTACTGCTGGC 60.885 63.158 0.00 0.00 36.97 4.85
198 199 1.142748 GATGTCGCTACTGCTGGCT 59.857 57.895 0.00 0.00 36.97 4.75
199 200 1.150567 GATGTCGCTACTGCTGGCTG 61.151 60.000 0.00 0.00 36.97 4.85
200 201 3.191539 GTCGCTACTGCTGGCTGC 61.192 66.667 9.67 9.67 43.25 5.25
201 202 4.457496 TCGCTACTGCTGGCTGCC 62.457 66.667 12.87 12.87 42.00 4.85
222 223 3.730761 CTCACGCCAAGCCTGCAC 61.731 66.667 0.00 0.00 0.00 4.57
303 304 4.152964 CGCTCCTGCTGGCTGCTA 62.153 66.667 17.45 3.45 43.37 3.49
304 305 2.513435 GCTCCTGCTGGCTGCTAC 60.513 66.667 17.45 0.00 43.37 3.58
305 306 3.028921 GCTCCTGCTGGCTGCTACT 62.029 63.158 17.45 0.00 43.37 2.57
306 307 1.153409 CTCCTGCTGGCTGCTACTG 60.153 63.158 17.45 5.33 43.37 2.74
307 308 2.823147 CCTGCTGGCTGCTACTGC 60.823 66.667 17.45 0.08 43.37 4.40
308 309 2.268280 CTGCTGGCTGCTACTGCT 59.732 61.111 17.45 0.00 43.37 4.24
309 310 1.376942 CTGCTGGCTGCTACTGCTT 60.377 57.895 17.45 0.00 43.37 3.91
310 311 1.645704 CTGCTGGCTGCTACTGCTTG 61.646 60.000 17.45 0.00 43.37 4.01
311 312 3.048941 GCTGGCTGCTACTGCTTGC 62.049 63.158 9.31 0.00 40.48 4.01
312 313 1.376942 CTGGCTGCTACTGCTTGCT 60.377 57.895 0.00 0.00 40.48 3.91
313 314 1.645704 CTGGCTGCTACTGCTTGCTG 61.646 60.000 0.00 0.00 40.48 4.41
314 315 2.484203 GCTGCTACTGCTTGCTGC 59.516 61.111 0.00 0.00 44.21 5.25
315 316 2.039405 GCTGCTACTGCTTGCTGCT 61.039 57.895 0.00 0.00 45.99 4.24
316 317 0.742281 GCTGCTACTGCTTGCTGCTA 60.742 55.000 0.00 0.00 45.99 3.49
317 318 1.005340 CTGCTACTGCTTGCTGCTAC 58.995 55.000 0.00 0.00 43.37 3.58
318 319 0.610174 TGCTACTGCTTGCTGCTACT 59.390 50.000 0.00 0.00 43.37 2.57
319 320 1.005340 GCTACTGCTTGCTGCTACTG 58.995 55.000 0.00 0.00 43.37 2.74
320 321 1.005340 CTACTGCTTGCTGCTACTGC 58.995 55.000 0.00 0.66 43.37 4.40
321 322 0.610174 TACTGCTTGCTGCTACTGCT 59.390 50.000 0.00 0.00 43.37 4.24
322 323 0.250640 ACTGCTTGCTGCTACTGCTT 60.251 50.000 0.00 0.00 43.37 3.91
323 324 0.168348 CTGCTTGCTGCTACTGCTTG 59.832 55.000 0.00 0.00 43.37 4.01
324 325 1.154073 GCTTGCTGCTACTGCTTGC 60.154 57.895 0.00 0.00 40.48 4.01
325 326 1.584380 GCTTGCTGCTACTGCTTGCT 61.584 55.000 0.00 0.00 39.01 3.91
326 327 0.168348 CTTGCTGCTACTGCTTGCTG 59.832 55.000 0.00 0.00 39.01 4.41
327 328 0.535780 TTGCTGCTACTGCTTGCTGT 60.536 50.000 9.84 9.84 39.01 4.40
328 329 0.952497 TGCTGCTACTGCTTGCTGTC 60.952 55.000 8.34 0.00 39.01 3.51
329 330 1.964290 GCTGCTACTGCTTGCTGTCG 61.964 60.000 8.34 4.39 40.48 4.35
330 331 1.357258 CTGCTACTGCTTGCTGTCGG 61.357 60.000 8.34 5.16 40.48 4.79
331 332 2.103042 GCTACTGCTTGCTGTCGGG 61.103 63.158 8.34 3.07 36.03 5.14
332 333 1.591703 CTACTGCTTGCTGTCGGGA 59.408 57.895 8.34 0.00 0.00 5.14
333 334 0.037326 CTACTGCTTGCTGTCGGGAA 60.037 55.000 8.34 0.00 0.00 3.97
334 335 0.320421 TACTGCTTGCTGTCGGGAAC 60.320 55.000 8.34 0.00 0.00 3.62
390 391 4.717629 CGGCAGTCGCTCCGTGAA 62.718 66.667 0.00 0.00 40.72 3.18
391 392 2.125512 GGCAGTCGCTCCGTGAAT 60.126 61.111 0.00 0.00 38.60 2.57
392 393 2.456119 GGCAGTCGCTCCGTGAATG 61.456 63.158 1.02 1.02 40.41 2.67
393 394 2.456119 GCAGTCGCTCCGTGAATGG 61.456 63.158 6.93 0.00 38.36 3.16
394 395 1.079819 CAGTCGCTCCGTGAATGGT 60.080 57.895 0.00 0.00 35.03 3.55
395 396 1.078759 CAGTCGCTCCGTGAATGGTC 61.079 60.000 0.00 0.00 35.03 4.02
396 397 1.810030 GTCGCTCCGTGAATGGTCC 60.810 63.158 0.00 0.00 0.00 4.46
397 398 2.264480 CGCTCCGTGAATGGTCCA 59.736 61.111 0.00 0.00 0.00 4.02
398 399 1.811266 CGCTCCGTGAATGGTCCAG 60.811 63.158 0.00 0.00 0.00 3.86
399 400 2.109126 GCTCCGTGAATGGTCCAGC 61.109 63.158 0.00 0.00 0.00 4.85
400 401 1.599047 CTCCGTGAATGGTCCAGCT 59.401 57.895 0.00 0.00 0.00 4.24
401 402 0.824109 CTCCGTGAATGGTCCAGCTA 59.176 55.000 0.00 0.00 0.00 3.32
402 403 0.824109 TCCGTGAATGGTCCAGCTAG 59.176 55.000 0.00 0.00 0.00 3.42
403 404 0.179073 CCGTGAATGGTCCAGCTAGG 60.179 60.000 0.00 0.00 39.47 3.02
404 405 0.811616 CGTGAATGGTCCAGCTAGGC 60.812 60.000 0.00 0.00 37.29 3.93
405 406 0.811616 GTGAATGGTCCAGCTAGGCG 60.812 60.000 0.00 0.00 37.29 5.52
406 407 1.227674 GAATGGTCCAGCTAGGCGG 60.228 63.158 0.00 0.00 37.29 6.13
407 408 3.406595 AATGGTCCAGCTAGGCGGC 62.407 63.158 0.00 0.00 37.29 6.53
409 410 2.838225 GGTCCAGCTAGGCGGCTA 60.838 66.667 18.65 18.65 41.00 3.93
410 411 2.731374 GTCCAGCTAGGCGGCTAG 59.269 66.667 34.85 34.85 41.00 3.42
411 412 2.521950 TCCAGCTAGGCGGCTAGG 60.522 66.667 37.71 26.58 41.00 3.02
412 413 3.620785 CCAGCTAGGCGGCTAGGG 61.621 72.222 37.71 29.38 41.00 3.53
413 414 2.840102 CAGCTAGGCGGCTAGGGT 60.840 66.667 37.71 24.67 41.00 4.34
414 415 2.041819 AGCTAGGCGGCTAGGGTT 60.042 61.111 37.71 16.73 41.16 4.11
415 416 1.113517 CAGCTAGGCGGCTAGGGTTA 61.114 60.000 37.71 12.09 41.00 2.85
416 417 1.114119 AGCTAGGCGGCTAGGGTTAC 61.114 60.000 37.71 24.58 41.16 2.50
417 418 1.114119 GCTAGGCGGCTAGGGTTACT 61.114 60.000 37.71 7.45 0.00 2.24
418 419 0.960286 CTAGGCGGCTAGGGTTACTC 59.040 60.000 32.50 0.00 0.00 2.59
419 420 0.468771 TAGGCGGCTAGGGTTACTCC 60.469 60.000 15.70 0.00 0.00 3.85
420 421 1.761271 GGCGGCTAGGGTTACTCCT 60.761 63.158 0.00 0.00 40.79 3.69
421 422 1.740905 GCGGCTAGGGTTACTCCTC 59.259 63.158 0.00 0.00 38.30 3.71
422 423 0.756070 GCGGCTAGGGTTACTCCTCT 60.756 60.000 0.00 0.00 38.30 3.69
423 424 1.320507 CGGCTAGGGTTACTCCTCTC 58.679 60.000 0.00 0.00 38.30 3.20
424 425 1.133730 CGGCTAGGGTTACTCCTCTCT 60.134 57.143 0.00 0.00 38.30 3.10
425 426 2.589720 GGCTAGGGTTACTCCTCTCTC 58.410 57.143 0.00 0.00 38.30 3.20
426 427 2.223745 GCTAGGGTTACTCCTCTCTCG 58.776 57.143 0.00 0.00 38.30 4.04
427 428 2.421811 GCTAGGGTTACTCCTCTCTCGT 60.422 54.545 0.00 0.00 38.30 4.18
428 429 2.131776 AGGGTTACTCCTCTCTCGTG 57.868 55.000 0.00 0.00 36.25 4.35
429 430 1.355043 AGGGTTACTCCTCTCTCGTGT 59.645 52.381 0.00 0.00 36.25 4.49
430 431 1.473278 GGGTTACTCCTCTCTCGTGTG 59.527 57.143 0.00 0.00 36.25 3.82
431 432 2.434428 GGTTACTCCTCTCTCGTGTGA 58.566 52.381 0.00 0.00 0.00 3.58
432 433 2.818432 GGTTACTCCTCTCTCGTGTGAA 59.182 50.000 0.00 0.00 0.00 3.18
433 434 3.366171 GGTTACTCCTCTCTCGTGTGAAC 60.366 52.174 0.00 0.00 0.00 3.18
434 435 2.279935 ACTCCTCTCTCGTGTGAACT 57.720 50.000 0.00 0.00 0.00 3.01
435 436 2.156098 ACTCCTCTCTCGTGTGAACTC 58.844 52.381 0.00 0.00 0.00 3.01
436 437 2.224670 ACTCCTCTCTCGTGTGAACTCT 60.225 50.000 0.00 0.00 0.00 3.24
437 438 2.155279 TCCTCTCTCGTGTGAACTCTG 58.845 52.381 0.00 0.00 0.00 3.35
438 439 2.155279 CCTCTCTCGTGTGAACTCTGA 58.845 52.381 0.00 0.00 0.00 3.27
439 440 2.554462 CCTCTCTCGTGTGAACTCTGAA 59.446 50.000 0.00 0.00 0.00 3.02
440 441 3.365868 CCTCTCTCGTGTGAACTCTGAAG 60.366 52.174 0.00 0.00 0.00 3.02
441 442 2.030717 TCTCTCGTGTGAACTCTGAAGC 60.031 50.000 0.00 0.00 0.00 3.86
442 443 1.056103 CTCGTGTGAACTCTGAAGCG 58.944 55.000 0.00 0.00 0.00 4.68
443 444 0.666374 TCGTGTGAACTCTGAAGCGA 59.334 50.000 0.00 0.00 0.00 4.93
444 445 1.056103 CGTGTGAACTCTGAAGCGAG 58.944 55.000 0.00 0.00 37.07 5.03
445 446 1.423395 GTGTGAACTCTGAAGCGAGG 58.577 55.000 0.00 0.00 35.33 4.63
446 447 1.000163 GTGTGAACTCTGAAGCGAGGA 60.000 52.381 0.00 0.00 35.33 3.71
447 448 1.686587 TGTGAACTCTGAAGCGAGGAA 59.313 47.619 0.00 0.00 35.33 3.36
448 449 2.062519 GTGAACTCTGAAGCGAGGAAC 58.937 52.381 0.00 0.00 35.33 3.62
449 450 1.335964 TGAACTCTGAAGCGAGGAACG 60.336 52.381 0.00 0.00 45.66 3.95
450 451 0.038159 AACTCTGAAGCGAGGAACGG 60.038 55.000 0.00 0.00 42.83 4.44
451 452 0.894184 ACTCTGAAGCGAGGAACGGA 60.894 55.000 0.00 0.00 42.83 4.69
452 453 0.179150 CTCTGAAGCGAGGAACGGAG 60.179 60.000 0.00 0.00 42.83 4.63
453 454 1.153745 CTGAAGCGAGGAACGGAGG 60.154 63.158 0.00 0.00 42.83 4.30
454 455 1.595993 CTGAAGCGAGGAACGGAGGA 61.596 60.000 0.00 0.00 42.83 3.71
455 456 0.970937 TGAAGCGAGGAACGGAGGAT 60.971 55.000 0.00 0.00 42.83 3.24
456 457 0.175989 GAAGCGAGGAACGGAGGATT 59.824 55.000 0.00 0.00 42.83 3.01
457 458 0.108138 AAGCGAGGAACGGAGGATTG 60.108 55.000 0.00 0.00 42.83 2.67
458 459 0.970937 AGCGAGGAACGGAGGATTGA 60.971 55.000 0.00 0.00 42.83 2.57
459 460 0.806492 GCGAGGAACGGAGGATTGAC 60.806 60.000 0.00 0.00 42.83 3.18
460 461 0.179108 CGAGGAACGGAGGATTGACC 60.179 60.000 0.00 0.00 38.46 4.02
467 468 2.667473 CGGAGGATTGACCGTTTACT 57.333 50.000 0.00 0.00 43.53 2.24
468 469 2.268298 CGGAGGATTGACCGTTTACTG 58.732 52.381 0.00 0.00 43.53 2.74
469 470 2.629051 GGAGGATTGACCGTTTACTGG 58.371 52.381 0.00 0.00 44.74 4.00
470 471 2.235402 GGAGGATTGACCGTTTACTGGA 59.765 50.000 0.00 0.00 44.74 3.86
471 472 3.522553 GAGGATTGACCGTTTACTGGAG 58.477 50.000 0.00 0.00 44.74 3.86
472 473 2.904434 AGGATTGACCGTTTACTGGAGT 59.096 45.455 0.00 0.00 44.74 3.85
473 474 3.056035 AGGATTGACCGTTTACTGGAGTC 60.056 47.826 0.00 0.00 44.74 3.36
474 475 3.056035 GGATTGACCGTTTACTGGAGTCT 60.056 47.826 0.00 0.00 0.00 3.24
475 476 3.380479 TTGACCGTTTACTGGAGTCTG 57.620 47.619 0.00 0.00 0.00 3.51
476 477 1.616865 TGACCGTTTACTGGAGTCTGG 59.383 52.381 0.00 0.00 0.00 3.86
477 478 1.891150 GACCGTTTACTGGAGTCTGGA 59.109 52.381 0.00 0.00 0.00 3.86
478 479 1.893801 ACCGTTTACTGGAGTCTGGAG 59.106 52.381 0.00 0.00 0.00 3.86
479 480 1.204941 CCGTTTACTGGAGTCTGGAGG 59.795 57.143 0.00 0.00 0.00 4.30
480 481 1.893801 CGTTTACTGGAGTCTGGAGGT 59.106 52.381 0.00 0.00 0.00 3.85
481 482 2.094649 CGTTTACTGGAGTCTGGAGGTC 60.095 54.545 0.00 0.00 0.00 3.85
482 483 1.835494 TTACTGGAGTCTGGAGGTCG 58.165 55.000 0.00 0.00 0.00 4.79
483 484 0.989602 TACTGGAGTCTGGAGGTCGA 59.010 55.000 0.00 0.00 0.00 4.20
484 485 0.322997 ACTGGAGTCTGGAGGTCGAG 60.323 60.000 0.00 0.00 0.00 4.04
485 486 0.034960 CTGGAGTCTGGAGGTCGAGA 60.035 60.000 0.00 0.00 0.00 4.04
486 487 0.404426 TGGAGTCTGGAGGTCGAGAA 59.596 55.000 0.00 0.00 32.56 2.87
487 488 1.099689 GGAGTCTGGAGGTCGAGAAG 58.900 60.000 0.00 0.00 32.56 2.85
488 489 0.454196 GAGTCTGGAGGTCGAGAAGC 59.546 60.000 0.00 0.00 32.56 3.86
489 490 0.968393 AGTCTGGAGGTCGAGAAGCC 60.968 60.000 0.00 0.00 32.56 4.35
490 491 0.968393 GTCTGGAGGTCGAGAAGCCT 60.968 60.000 0.00 0.00 37.91 4.58
491 492 0.967887 TCTGGAGGTCGAGAAGCCTG 60.968 60.000 0.00 0.00 34.81 4.85
492 493 2.185608 GGAGGTCGAGAAGCCTGC 59.814 66.667 0.00 0.00 36.12 4.85
493 494 2.355193 GGAGGTCGAGAAGCCTGCT 61.355 63.158 4.33 0.00 39.67 4.24
494 495 1.140804 GAGGTCGAGAAGCCTGCTC 59.859 63.158 0.00 0.00 34.81 4.26
499 500 2.125912 GAGAAGCCTGCTCGCGAA 60.126 61.111 11.33 0.00 0.00 4.70
500 501 2.433318 AGAAGCCTGCTCGCGAAC 60.433 61.111 11.33 6.37 0.00 3.95
501 502 2.738521 GAAGCCTGCTCGCGAACA 60.739 61.111 11.33 11.84 0.00 3.18
502 503 3.016474 GAAGCCTGCTCGCGAACAC 62.016 63.158 11.33 3.06 0.00 3.32
503 504 3.807631 AAGCCTGCTCGCGAACACA 62.808 57.895 11.33 8.15 0.00 3.72
504 505 3.782244 GCCTGCTCGCGAACACAG 61.782 66.667 20.64 20.64 0.00 3.66
505 506 3.114616 CCTGCTCGCGAACACAGG 61.115 66.667 27.83 27.83 43.45 4.00
506 507 2.049156 CTGCTCGCGAACACAGGA 60.049 61.111 20.10 6.04 0.00 3.86
507 508 1.446792 CTGCTCGCGAACACAGGAT 60.447 57.895 20.10 0.00 0.00 3.24
508 509 1.416813 CTGCTCGCGAACACAGGATC 61.417 60.000 20.10 0.00 0.00 3.36
509 510 2.508891 GCTCGCGAACACAGGATCG 61.509 63.158 11.33 0.00 41.65 3.69
514 515 3.352447 CGAACACAGGATCGCATCT 57.648 52.632 0.00 0.00 32.53 2.90
515 516 0.926155 CGAACACAGGATCGCATCTG 59.074 55.000 0.00 0.00 32.53 2.90
516 517 1.293924 GAACACAGGATCGCATCTGG 58.706 55.000 2.39 0.00 35.47 3.86
517 518 0.745845 AACACAGGATCGCATCTGGC 60.746 55.000 2.39 0.00 35.47 4.85
518 519 1.890979 CACAGGATCGCATCTGGCC 60.891 63.158 0.00 0.00 40.31 5.36
519 520 2.281345 CAGGATCGCATCTGGCCC 60.281 66.667 0.00 0.00 40.31 5.80
520 521 2.769621 AGGATCGCATCTGGCCCA 60.770 61.111 0.00 0.00 40.31 5.36
521 522 2.192979 GGATCGCATCTGGCCCAA 59.807 61.111 0.00 0.00 40.31 4.12
522 523 1.228367 GGATCGCATCTGGCCCAAT 60.228 57.895 0.00 0.00 40.31 3.16
523 524 0.825010 GGATCGCATCTGGCCCAATT 60.825 55.000 0.00 0.00 40.31 2.32
524 525 1.545428 GGATCGCATCTGGCCCAATTA 60.545 52.381 0.00 0.00 40.31 1.40
525 526 1.808945 GATCGCATCTGGCCCAATTAG 59.191 52.381 0.00 0.00 40.31 1.73
526 527 0.179020 TCGCATCTGGCCCAATTAGG 60.179 55.000 0.00 0.00 40.31 2.69
537 538 1.339929 CCCAATTAGGCCCAATAACGC 59.660 52.381 0.00 0.00 35.39 4.84
538 539 1.001815 CCAATTAGGCCCAATAACGCG 60.002 52.381 3.53 3.53 0.00 6.01
539 540 1.001815 CAATTAGGCCCAATAACGCGG 60.002 52.381 12.47 0.00 0.00 6.46
540 541 0.536460 ATTAGGCCCAATAACGCGGG 60.536 55.000 12.47 0.82 46.15 6.13
541 542 1.624479 TTAGGCCCAATAACGCGGGA 61.624 55.000 12.47 0.00 46.34 5.14
542 543 3.206957 GGCCCAATAACGCGGGAC 61.207 66.667 12.47 0.00 46.34 4.46
559 560 4.941325 GGGACGTAGATGGTTTTTCTTC 57.059 45.455 0.00 0.00 0.00 2.87
560 561 4.576879 GGGACGTAGATGGTTTTTCTTCT 58.423 43.478 0.00 0.00 0.00 2.85
561 562 4.630505 GGGACGTAGATGGTTTTTCTTCTC 59.369 45.833 0.00 0.00 0.00 2.87
562 563 4.326548 GGACGTAGATGGTTTTTCTTCTCG 59.673 45.833 0.00 0.00 0.00 4.04
563 564 4.879598 ACGTAGATGGTTTTTCTTCTCGT 58.120 39.130 0.00 0.00 0.00 4.18
564 565 4.684703 ACGTAGATGGTTTTTCTTCTCGTG 59.315 41.667 0.00 0.00 31.24 4.35
565 566 4.921515 CGTAGATGGTTTTTCTTCTCGTGA 59.078 41.667 0.00 0.00 0.00 4.35
566 567 5.577164 CGTAGATGGTTTTTCTTCTCGTGAT 59.423 40.000 0.00 0.00 0.00 3.06
567 568 6.090898 CGTAGATGGTTTTTCTTCTCGTGATT 59.909 38.462 0.00 0.00 0.00 2.57
568 569 6.884280 AGATGGTTTTTCTTCTCGTGATTT 57.116 33.333 0.00 0.00 0.00 2.17
569 570 7.277174 AGATGGTTTTTCTTCTCGTGATTTT 57.723 32.000 0.00 0.00 0.00 1.82
570 571 7.716612 AGATGGTTTTTCTTCTCGTGATTTTT 58.283 30.769 0.00 0.00 0.00 1.94
571 572 7.862873 AGATGGTTTTTCTTCTCGTGATTTTTC 59.137 33.333 0.00 0.00 0.00 2.29
572 573 6.857956 TGGTTTTTCTTCTCGTGATTTTTCA 58.142 32.000 0.00 0.00 0.00 2.69
573 574 7.488322 TGGTTTTTCTTCTCGTGATTTTTCAT 58.512 30.769 0.00 0.00 0.00 2.57
574 575 7.647715 TGGTTTTTCTTCTCGTGATTTTTCATC 59.352 33.333 0.00 0.00 0.00 2.92
575 576 7.149128 GGTTTTTCTTCTCGTGATTTTTCATCG 60.149 37.037 0.00 0.00 0.00 3.84
576 577 6.779115 TTTCTTCTCGTGATTTTTCATCGA 57.221 33.333 0.00 0.00 0.00 3.59
577 578 6.968131 TTCTTCTCGTGATTTTTCATCGAT 57.032 33.333 0.00 0.00 0.00 3.59
578 579 6.336514 TCTTCTCGTGATTTTTCATCGATG 57.663 37.500 19.61 19.61 0.00 3.84
579 580 5.291858 TCTTCTCGTGATTTTTCATCGATGG 59.708 40.000 24.61 7.01 0.00 3.51
580 581 4.754322 TCTCGTGATTTTTCATCGATGGA 58.246 39.130 24.61 14.64 0.00 3.41
581 582 5.359756 TCTCGTGATTTTTCATCGATGGAT 58.640 37.500 24.61 13.47 0.00 3.41
582 583 5.817296 TCTCGTGATTTTTCATCGATGGATT 59.183 36.000 24.61 4.85 0.00 3.01
583 584 6.018751 TCTCGTGATTTTTCATCGATGGATTC 60.019 38.462 24.61 13.71 0.00 2.52
584 585 5.817296 TCGTGATTTTTCATCGATGGATTCT 59.183 36.000 24.61 7.86 0.00 2.40
585 586 5.905733 CGTGATTTTTCATCGATGGATTCTG 59.094 40.000 24.61 0.00 0.00 3.02
586 587 6.457392 CGTGATTTTTCATCGATGGATTCTGT 60.457 38.462 24.61 6.03 0.00 3.41
587 588 6.690098 GTGATTTTTCATCGATGGATTCTGTG 59.310 38.462 24.61 0.00 0.00 3.66
588 589 4.621068 TTTTCATCGATGGATTCTGTGC 57.379 40.909 24.61 0.00 0.00 4.57
589 590 1.856802 TCATCGATGGATTCTGTGCG 58.143 50.000 24.61 0.00 0.00 5.34
590 591 1.136891 TCATCGATGGATTCTGTGCGT 59.863 47.619 24.61 0.00 0.00 5.24
591 592 2.360801 TCATCGATGGATTCTGTGCGTA 59.639 45.455 24.61 0.00 0.00 4.42
592 593 3.005791 TCATCGATGGATTCTGTGCGTAT 59.994 43.478 24.61 0.00 0.00 3.06
593 594 4.217550 TCATCGATGGATTCTGTGCGTATA 59.782 41.667 24.61 0.00 0.00 1.47
594 595 3.897325 TCGATGGATTCTGTGCGTATAC 58.103 45.455 0.00 0.00 0.00 1.47
595 596 3.316868 TCGATGGATTCTGTGCGTATACA 59.683 43.478 3.32 0.00 0.00 2.29
596 597 4.022329 TCGATGGATTCTGTGCGTATACAT 60.022 41.667 3.32 0.00 27.64 2.29
597 598 4.686091 CGATGGATTCTGTGCGTATACATT 59.314 41.667 3.32 0.00 25.38 2.71
598 599 5.861787 CGATGGATTCTGTGCGTATACATTA 59.138 40.000 3.32 0.00 25.38 1.90
599 600 6.183359 CGATGGATTCTGTGCGTATACATTAC 60.183 42.308 3.32 0.00 25.38 1.89
600 601 5.908341 TGGATTCTGTGCGTATACATTACA 58.092 37.500 3.32 3.99 0.00 2.41
601 602 6.521162 TGGATTCTGTGCGTATACATTACAT 58.479 36.000 3.32 0.00 0.00 2.29
602 603 7.662897 TGGATTCTGTGCGTATACATTACATA 58.337 34.615 3.32 0.00 0.00 2.29
603 604 8.311109 TGGATTCTGTGCGTATACATTACATAT 58.689 33.333 3.32 2.33 0.00 1.78
604 605 9.797556 GGATTCTGTGCGTATACATTACATATA 57.202 33.333 3.32 0.00 0.00 0.86
641 642 3.874392 AAATTCCGCTCCAAATCAAGG 57.126 42.857 0.00 0.00 0.00 3.61
642 643 2.514458 ATTCCGCTCCAAATCAAGGT 57.486 45.000 0.00 0.00 0.00 3.50
643 644 3.644966 ATTCCGCTCCAAATCAAGGTA 57.355 42.857 0.00 0.00 0.00 3.08
644 645 2.691409 TCCGCTCCAAATCAAGGTAG 57.309 50.000 0.00 0.00 0.00 3.18
645 646 1.209504 TCCGCTCCAAATCAAGGTAGG 59.790 52.381 0.00 0.00 0.00 3.18
646 647 1.668419 CGCTCCAAATCAAGGTAGGG 58.332 55.000 0.00 0.00 0.00 3.53
647 648 1.393603 GCTCCAAATCAAGGTAGGGC 58.606 55.000 0.00 0.00 0.00 5.19
648 649 1.668419 CTCCAAATCAAGGTAGGGCG 58.332 55.000 0.00 0.00 0.00 6.13
649 650 1.209504 CTCCAAATCAAGGTAGGGCGA 59.790 52.381 0.00 0.00 0.00 5.54
650 651 1.209504 TCCAAATCAAGGTAGGGCGAG 59.790 52.381 0.00 0.00 0.00 5.03
651 652 1.017387 CAAATCAAGGTAGGGCGAGC 58.983 55.000 0.00 0.00 0.00 5.03
652 653 0.462047 AAATCAAGGTAGGGCGAGCG 60.462 55.000 0.00 0.00 0.00 5.03
653 654 2.925162 AATCAAGGTAGGGCGAGCGC 62.925 60.000 6.27 6.27 41.06 5.92
668 669 4.814294 CGCCACACCTCGCCCTAC 62.814 72.222 0.00 0.00 0.00 3.18
669 670 4.468689 GCCACACCTCGCCCTACC 62.469 72.222 0.00 0.00 0.00 3.18
670 671 4.143333 CCACACCTCGCCCTACCG 62.143 72.222 0.00 0.00 0.00 4.02
671 672 4.143333 CACACCTCGCCCTACCGG 62.143 72.222 0.00 0.00 0.00 5.28
687 688 2.501610 GGGATCTCCGCCTGTGTC 59.498 66.667 0.00 0.00 36.71 3.67
688 689 2.501610 GGATCTCCGCCTGTGTCC 59.498 66.667 0.00 0.00 0.00 4.02
689 690 2.501610 GATCTCCGCCTGTGTCCC 59.498 66.667 0.00 0.00 0.00 4.46
690 691 2.284625 ATCTCCGCCTGTGTCCCA 60.285 61.111 0.00 0.00 0.00 4.37
738 739 0.324614 ACATGCATGGAGACGGACAA 59.675 50.000 29.41 0.00 0.00 3.18
799 804 3.664495 GCATGCTGCACAGTGAGT 58.336 55.556 11.37 0.00 44.26 3.41
987 1038 1.127343 CCTCCTCCTGACTTGGATCC 58.873 60.000 4.20 4.20 35.30 3.36
1087 1138 3.210857 GCAGGTCAGTTTGCGAGTA 57.789 52.632 0.00 0.00 0.00 2.59
1089 1140 1.429463 CAGGTCAGTTTGCGAGTACC 58.571 55.000 0.00 0.00 0.00 3.34
1090 1141 0.320697 AGGTCAGTTTGCGAGTACCC 59.679 55.000 0.00 0.00 0.00 3.69
1092 1143 1.338769 GGTCAGTTTGCGAGTACCCAT 60.339 52.381 0.00 0.00 0.00 4.00
1112 1163 0.108138 CACTCCATCTCCGGTTGTCC 60.108 60.000 0.00 0.00 0.00 4.02
1114 1165 0.833287 CTCCATCTCCGGTTGTCCAT 59.167 55.000 0.00 0.00 0.00 3.41
1119 1170 4.013728 CCATCTCCGGTTGTCCATTTTTA 58.986 43.478 0.00 0.00 0.00 1.52
1161 1219 0.250553 TTCAATCCGTCCTGCCGTTT 60.251 50.000 0.00 0.00 0.00 3.60
1174 1232 4.093952 CGTTTGGCTGCTCGCTGG 62.094 66.667 0.00 0.00 39.13 4.85
1194 1252 0.673644 CTTCGCCAAATCCACGGTCT 60.674 55.000 0.00 0.00 0.00 3.85
1203 1261 1.966901 ATCCACGGTCTAATGGCGCA 61.967 55.000 10.83 0.00 35.81 6.09
1224 1282 2.168201 ACGCGCGGTTAAATTGATTC 57.832 45.000 35.22 0.00 0.00 2.52
1264 1322 1.470098 AGCGAAATGTGAACATGAGGC 59.530 47.619 0.00 1.36 36.56 4.70
1282 1344 9.435688 ACATGAGGCAAAGAAAATAATTTTACC 57.564 29.630 0.00 0.00 31.94 2.85
1779 1885 1.328439 CCTTCAACGTCGTCTTCTCG 58.672 55.000 0.00 0.00 0.00 4.04
1824 1930 2.802667 CGGCCTGATCTTCAACGCG 61.803 63.158 3.53 3.53 0.00 6.01
1836 1942 2.034879 CAACGCGGTGATCCTGCTT 61.035 57.895 22.23 0.00 33.49 3.91
2426 2622 2.447244 GCTGGTGGCTAGCTAGTATG 57.553 55.000 21.62 7.97 38.14 2.39
2522 2720 6.263617 CGAGGAAACTAGCTCTATTTAGGAGT 59.736 42.308 0.00 0.00 44.43 3.85
2523 2721 7.201839 CGAGGAAACTAGCTCTATTTAGGAGTT 60.202 40.741 0.00 0.00 44.43 3.01
2524 2722 9.134055 GAGGAAACTAGCTCTATTTAGGAGTTA 57.866 37.037 0.00 0.00 44.43 2.24
2525 2723 9.490083 AGGAAACTAGCTCTATTTAGGAGTTAA 57.510 33.333 0.00 0.00 40.61 2.01
2552 2754 7.496529 TGCTAATACTATGTTGCAGGATTTC 57.503 36.000 0.00 0.00 29.27 2.17
2556 2767 7.961326 AATACTATGTTGCAGGATTTCCTTT 57.039 32.000 0.00 0.00 46.09 3.11
2557 2768 7.961326 ATACTATGTTGCAGGATTTCCTTTT 57.039 32.000 0.00 0.00 46.09 2.27
2558 2769 9.474313 AATACTATGTTGCAGGATTTCCTTTTA 57.526 29.630 0.00 0.00 46.09 1.52
2559 2770 7.961326 ACTATGTTGCAGGATTTCCTTTTAT 57.039 32.000 0.00 0.00 46.09 1.40
2561 2772 9.125026 ACTATGTTGCAGGATTTCCTTTTATAG 57.875 33.333 0.00 4.56 46.09 1.31
2562 2773 9.342308 CTATGTTGCAGGATTTCCTTTTATAGA 57.658 33.333 0.00 0.00 46.09 1.98
2563 2774 7.630242 TGTTGCAGGATTTCCTTTTATAGAG 57.370 36.000 0.00 0.00 46.09 2.43
2564 2775 7.175104 TGTTGCAGGATTTCCTTTTATAGAGT 58.825 34.615 0.00 0.00 46.09 3.24
2627 2851 7.425577 AGGTTGCTTTTATTCAAAAATGCTC 57.574 32.000 8.17 3.30 39.18 4.26
2628 2852 7.219322 AGGTTGCTTTTATTCAAAAATGCTCT 58.781 30.769 8.17 2.66 39.18 4.09
2629 2853 7.716560 AGGTTGCTTTTATTCAAAAATGCTCTT 59.283 29.630 8.17 0.00 39.18 2.85
2631 2855 9.720667 GTTGCTTTTATTCAAAAATGCTCTTTT 57.279 25.926 8.17 0.00 39.18 2.27
2658 2882 6.781138 TCTCAAATAATAAATGCCACACGTC 58.219 36.000 0.00 0.00 0.00 4.34
2666 2890 1.909700 ATGCCACACGTCAGGAATTT 58.090 45.000 6.97 0.00 0.00 1.82
2676 2900 7.279981 CCACACGTCAGGAATTTAGATATTCAA 59.720 37.037 0.00 0.00 36.46 2.69
2695 2921 1.964373 GCCGAACGTGTTGGACCAT 60.964 57.895 0.00 0.00 0.00 3.55
2711 2937 1.143684 ACCATTAGATTCTGGGCGCAT 59.856 47.619 10.83 0.00 36.82 4.73
2728 2954 4.095334 GGCGCATGAATCTTGATGCATATA 59.905 41.667 10.83 0.00 46.15 0.86
2730 2956 5.263948 CGCATGAATCTTGATGCATATAGC 58.736 41.667 13.45 3.73 46.15 2.97
2745 2971 4.680110 GCATATAGCGTGACACGTTAGAAT 59.320 41.667 27.32 19.28 44.73 2.40
2760 2986 1.232119 AGAATTTTTCGTTCGGGCGT 58.768 45.000 0.14 0.00 34.02 5.68
2763 2989 0.439600 ATTTTTCGTTCGGGCGTACG 59.560 50.000 11.84 11.84 39.62 3.67
2764 2990 0.873743 TTTTTCGTTCGGGCGTACGT 60.874 50.000 17.90 0.00 39.36 3.57
2765 2991 1.547292 TTTTCGTTCGGGCGTACGTG 61.547 55.000 17.90 7.52 39.36 4.49
2770 2996 3.313007 TTCGGGCGTACGTGTCGAG 62.313 63.158 17.90 3.31 34.94 4.04
2810 3038 4.082136 GCTCTTTCCTCTTCCTTCGTCTTA 60.082 45.833 0.00 0.00 0.00 2.10
2832 3062 2.205152 ACTAGGGACGCGTGGTTGT 61.205 57.895 20.70 6.04 0.00 3.32
2834 3064 1.005867 TAGGGACGCGTGGTTGTTC 60.006 57.895 20.70 0.00 0.00 3.18
2867 3097 2.070262 GCACTTTGCAATCTTGTCCC 57.930 50.000 0.00 0.00 44.26 4.46
2902 3132 1.835267 GGGCCTTTTGTCCCGGTTT 60.835 57.895 0.84 0.00 32.00 3.27
2917 3147 1.271163 CGGTTTGTAAGGGCCTTCTGA 60.271 52.381 24.77 1.69 0.00 3.27
2928 3158 0.536460 GCCTTCTGACCCGGTTTTGA 60.536 55.000 0.00 0.00 0.00 2.69
2957 3188 7.869429 CCGGGACTAAAATATCGTTACTAATGT 59.131 37.037 0.00 0.00 0.00 2.71
2986 3217 3.007182 CCTTTAGTCCCGGTTCTTACACA 59.993 47.826 0.00 0.00 0.00 3.72
3236 3515 2.510768 ACGCTACTGCTATGCCTAAC 57.489 50.000 0.00 0.00 36.97 2.34
3237 3516 1.269102 ACGCTACTGCTATGCCTAACG 60.269 52.381 0.00 0.00 36.97 3.18
3238 3517 1.140816 GCTACTGCTATGCCTAACGC 58.859 55.000 0.00 0.00 36.03 4.84
3239 3518 1.269831 GCTACTGCTATGCCTAACGCT 60.270 52.381 0.00 0.00 35.66 5.07
3240 3519 2.030185 GCTACTGCTATGCCTAACGCTA 60.030 50.000 0.00 0.00 35.66 4.26
3289 3569 0.943673 TGTGGTGCATGTCGAAAGTG 59.056 50.000 0.00 0.00 0.00 3.16
3365 3650 2.030371 TGCATGTTGCCTTCACTTCAA 58.970 42.857 0.00 0.00 44.23 2.69
3366 3651 2.629137 TGCATGTTGCCTTCACTTCAAT 59.371 40.909 0.00 0.00 44.23 2.57
3367 3652 3.825585 TGCATGTTGCCTTCACTTCAATA 59.174 39.130 0.00 0.00 44.23 1.90
3392 3677 3.514706 CCAATCCATGTTCATTTCACCCA 59.485 43.478 0.00 0.00 0.00 4.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 5.232463 CAGATTTGACAAGACATTTTGGGG 58.768 41.667 0.00 0.00 32.32 4.96
58 59 9.717942 GACTTAGCAATCTATAATCCAGTGATT 57.282 33.333 0.00 0.00 43.56 2.57
59 60 8.874156 TGACTTAGCAATCTATAATCCAGTGAT 58.126 33.333 0.00 0.00 0.00 3.06
60 61 8.250143 TGACTTAGCAATCTATAATCCAGTGA 57.750 34.615 0.00 0.00 0.00 3.41
61 62 9.499479 AATGACTTAGCAATCTATAATCCAGTG 57.501 33.333 0.00 0.00 0.00 3.66
62 63 9.717942 GAATGACTTAGCAATCTATAATCCAGT 57.282 33.333 0.00 0.00 0.00 4.00
63 64 9.941325 AGAATGACTTAGCAATCTATAATCCAG 57.059 33.333 0.00 0.00 0.00 3.86
64 65 9.935241 GAGAATGACTTAGCAATCTATAATCCA 57.065 33.333 0.00 0.00 28.57 3.41
70 71 9.896645 TTTTCAGAGAATGACTTAGCAATCTAT 57.103 29.630 0.00 0.00 37.77 1.98
71 72 9.896645 ATTTTCAGAGAATGACTTAGCAATCTA 57.103 29.630 0.00 0.00 37.77 1.98
72 73 8.675504 CATTTTCAGAGAATGACTTAGCAATCT 58.324 33.333 7.77 0.00 37.77 2.40
73 74 8.671921 TCATTTTCAGAGAATGACTTAGCAATC 58.328 33.333 11.50 0.00 38.29 2.67
74 75 8.571461 TCATTTTCAGAGAATGACTTAGCAAT 57.429 30.769 11.50 0.00 38.29 3.56
75 76 7.984422 TCATTTTCAGAGAATGACTTAGCAA 57.016 32.000 11.50 0.00 38.29 3.91
87 88 9.559732 TCTGAATTTTAGTGTCATTTTCAGAGA 57.440 29.630 8.04 0.00 41.35 3.10
93 94 9.868277 TGTGTTTCTGAATTTTAGTGTCATTTT 57.132 25.926 0.00 0.00 0.00 1.82
94 95 9.301153 GTGTGTTTCTGAATTTTAGTGTCATTT 57.699 29.630 0.00 0.00 0.00 2.32
95 96 7.920682 GGTGTGTTTCTGAATTTTAGTGTCATT 59.079 33.333 0.00 0.00 0.00 2.57
96 97 7.285401 AGGTGTGTTTCTGAATTTTAGTGTCAT 59.715 33.333 0.00 0.00 0.00 3.06
97 98 6.601613 AGGTGTGTTTCTGAATTTTAGTGTCA 59.398 34.615 0.00 0.00 0.00 3.58
98 99 7.012421 AGAGGTGTGTTTCTGAATTTTAGTGTC 59.988 37.037 0.00 0.00 0.00 3.67
99 100 6.828785 AGAGGTGTGTTTCTGAATTTTAGTGT 59.171 34.615 0.00 0.00 0.00 3.55
100 101 7.264373 AGAGGTGTGTTTCTGAATTTTAGTG 57.736 36.000 0.00 0.00 0.00 2.74
101 102 6.486993 GGAGAGGTGTGTTTCTGAATTTTAGT 59.513 38.462 0.00 0.00 0.00 2.24
102 103 6.072452 GGGAGAGGTGTGTTTCTGAATTTTAG 60.072 42.308 0.00 0.00 0.00 1.85
103 104 5.768164 GGGAGAGGTGTGTTTCTGAATTTTA 59.232 40.000 0.00 0.00 0.00 1.52
104 105 4.584743 GGGAGAGGTGTGTTTCTGAATTTT 59.415 41.667 0.00 0.00 0.00 1.82
105 106 4.145052 GGGAGAGGTGTGTTTCTGAATTT 58.855 43.478 0.00 0.00 0.00 1.82
106 107 3.756117 GGGAGAGGTGTGTTTCTGAATT 58.244 45.455 0.00 0.00 0.00 2.17
107 108 2.289694 CGGGAGAGGTGTGTTTCTGAAT 60.290 50.000 0.00 0.00 0.00 2.57
108 109 1.070134 CGGGAGAGGTGTGTTTCTGAA 59.930 52.381 0.00 0.00 0.00 3.02
109 110 0.679505 CGGGAGAGGTGTGTTTCTGA 59.320 55.000 0.00 0.00 0.00 3.27
110 111 0.393077 ACGGGAGAGGTGTGTTTCTG 59.607 55.000 0.00 0.00 0.00 3.02
111 112 1.070289 GAACGGGAGAGGTGTGTTTCT 59.930 52.381 0.00 0.00 0.00 2.52
118 119 0.317479 AAAGACGAACGGGAGAGGTG 59.683 55.000 0.00 0.00 0.00 4.00
122 123 0.828762 TCCCAAAGACGAACGGGAGA 60.829 55.000 0.00 0.00 42.94 3.71
123 124 1.669440 TCCCAAAGACGAACGGGAG 59.331 57.895 0.00 0.00 42.94 4.30
144 145 5.645497 CGAAGATGGACAGGAAGAGAAAAAT 59.355 40.000 0.00 0.00 0.00 1.82
150 151 2.493675 TGACGAAGATGGACAGGAAGAG 59.506 50.000 0.00 0.00 0.00 2.85
152 153 2.493675 TCTGACGAAGATGGACAGGAAG 59.506 50.000 0.00 0.00 0.00 3.46
153 154 2.525368 TCTGACGAAGATGGACAGGAA 58.475 47.619 0.00 0.00 0.00 3.36
154 155 2.215942 TCTGACGAAGATGGACAGGA 57.784 50.000 0.00 0.00 0.00 3.86
155 156 3.193263 CATTCTGACGAAGATGGACAGG 58.807 50.000 0.00 0.00 33.93 4.00
156 157 2.606725 GCATTCTGACGAAGATGGACAG 59.393 50.000 0.00 0.00 33.93 3.51
157 158 2.621338 GCATTCTGACGAAGATGGACA 58.379 47.619 0.00 0.00 33.93 4.02
158 159 1.936547 GGCATTCTGACGAAGATGGAC 59.063 52.381 0.00 0.00 33.93 4.02
159 160 2.315925 GGCATTCTGACGAAGATGGA 57.684 50.000 0.00 0.00 33.93 3.41
168 169 1.766143 GCGACATCCGGCATTCTGAC 61.766 60.000 0.00 0.00 39.04 3.51
169 170 1.521457 GCGACATCCGGCATTCTGA 60.521 57.895 0.00 0.00 39.04 3.27
170 171 0.249447 TAGCGACATCCGGCATTCTG 60.249 55.000 0.00 0.00 39.04 3.02
171 172 0.249489 GTAGCGACATCCGGCATTCT 60.249 55.000 0.00 0.00 39.04 2.40
172 173 0.249489 AGTAGCGACATCCGGCATTC 60.249 55.000 0.00 0.00 39.04 2.67
173 174 0.530650 CAGTAGCGACATCCGGCATT 60.531 55.000 0.00 0.00 39.04 3.56
174 175 1.068083 CAGTAGCGACATCCGGCAT 59.932 57.895 0.00 0.00 39.04 4.40
175 176 2.494445 CAGTAGCGACATCCGGCA 59.506 61.111 0.00 0.00 39.04 5.69
176 177 2.962253 GCAGTAGCGACATCCGGC 60.962 66.667 0.00 0.00 39.04 6.13
205 206 3.730761 GTGCAGGCTTGGCGTGAG 61.731 66.667 14.93 0.00 45.68 3.51
293 294 3.048941 GCAAGCAGTAGCAGCCAGC 62.049 63.158 0.00 0.00 45.49 4.85
294 295 1.376942 AGCAAGCAGTAGCAGCCAG 60.377 57.895 0.00 0.00 45.49 4.85
295 296 1.673337 CAGCAAGCAGTAGCAGCCA 60.673 57.895 0.00 0.00 45.49 4.75
296 297 3.048941 GCAGCAAGCAGTAGCAGCC 62.049 63.158 0.00 0.00 45.49 4.85
297 298 2.484203 GCAGCAAGCAGTAGCAGC 59.516 61.111 0.00 0.00 45.49 5.25
306 307 1.154073 GCAAGCAGTAGCAGCAAGC 60.154 57.895 0.00 0.00 45.49 4.01
307 308 0.168348 CAGCAAGCAGTAGCAGCAAG 59.832 55.000 0.00 0.00 43.67 4.01
308 309 0.535780 ACAGCAAGCAGTAGCAGCAA 60.536 50.000 0.00 0.00 43.67 3.91
309 310 0.952497 GACAGCAAGCAGTAGCAGCA 60.952 55.000 0.00 0.00 43.67 4.41
310 311 1.792941 GACAGCAAGCAGTAGCAGC 59.207 57.895 0.00 0.00 45.49 5.25
311 312 1.357258 CCGACAGCAAGCAGTAGCAG 61.357 60.000 0.00 0.00 45.49 4.24
312 313 1.374631 CCGACAGCAAGCAGTAGCA 60.375 57.895 0.00 0.00 45.49 3.49
313 314 2.103042 CCCGACAGCAAGCAGTAGC 61.103 63.158 0.00 0.00 42.56 3.58
314 315 0.037326 TTCCCGACAGCAAGCAGTAG 60.037 55.000 0.00 0.00 0.00 2.57
315 316 0.320421 GTTCCCGACAGCAAGCAGTA 60.320 55.000 0.00 0.00 0.00 2.74
316 317 1.598130 GTTCCCGACAGCAAGCAGT 60.598 57.895 0.00 0.00 0.00 4.40
317 318 2.671177 CGTTCCCGACAGCAAGCAG 61.671 63.158 0.00 0.00 35.63 4.24
318 319 2.664851 CGTTCCCGACAGCAAGCA 60.665 61.111 0.00 0.00 35.63 3.91
319 320 3.423154 CCGTTCCCGACAGCAAGC 61.423 66.667 0.00 0.00 35.63 4.01
320 321 2.742372 CCCGTTCCCGACAGCAAG 60.742 66.667 0.00 0.00 35.63 4.01
321 322 3.234630 CTCCCGTTCCCGACAGCAA 62.235 63.158 0.00 0.00 35.63 3.91
322 323 3.691342 CTCCCGTTCCCGACAGCA 61.691 66.667 0.00 0.00 35.63 4.41
324 325 4.452733 GGCTCCCGTTCCCGACAG 62.453 72.222 0.00 0.00 35.63 3.51
351 352 3.961414 TTCCCGTTCCTGGTGGCC 61.961 66.667 0.00 0.00 0.00 5.36
352 353 2.671963 GTTCCCGTTCCTGGTGGC 60.672 66.667 0.00 0.00 0.00 5.01
353 354 2.358247 CGTTCCCGTTCCTGGTGG 60.358 66.667 0.00 0.00 0.00 4.61
354 355 3.047877 GCGTTCCCGTTCCTGGTG 61.048 66.667 0.00 0.00 36.15 4.17
355 356 4.675029 CGCGTTCCCGTTCCTGGT 62.675 66.667 0.00 0.00 36.15 4.00
374 375 2.125512 ATTCACGGAGCGACTGCC 60.126 61.111 0.00 0.00 44.31 4.85
375 376 2.456119 CCATTCACGGAGCGACTGC 61.456 63.158 0.00 0.00 43.24 4.40
376 377 1.078759 GACCATTCACGGAGCGACTG 61.079 60.000 0.00 0.00 0.00 3.51
377 378 1.215647 GACCATTCACGGAGCGACT 59.784 57.895 0.00 0.00 0.00 4.18
378 379 1.810030 GGACCATTCACGGAGCGAC 60.810 63.158 0.00 0.00 0.00 5.19
379 380 2.225791 CTGGACCATTCACGGAGCGA 62.226 60.000 0.00 0.00 0.00 4.93
380 381 1.811266 CTGGACCATTCACGGAGCG 60.811 63.158 0.00 0.00 0.00 5.03
381 382 2.109126 GCTGGACCATTCACGGAGC 61.109 63.158 0.00 0.00 0.00 4.70
382 383 0.824109 TAGCTGGACCATTCACGGAG 59.176 55.000 0.00 0.00 0.00 4.63
383 384 0.824109 CTAGCTGGACCATTCACGGA 59.176 55.000 0.00 0.00 0.00 4.69
384 385 0.179073 CCTAGCTGGACCATTCACGG 60.179 60.000 0.00 0.00 38.35 4.94
385 386 0.811616 GCCTAGCTGGACCATTCACG 60.812 60.000 0.00 0.00 38.35 4.35
386 387 0.811616 CGCCTAGCTGGACCATTCAC 60.812 60.000 0.00 0.00 38.35 3.18
387 388 1.522092 CGCCTAGCTGGACCATTCA 59.478 57.895 0.00 0.00 38.35 2.57
388 389 1.227674 CCGCCTAGCTGGACCATTC 60.228 63.158 0.00 0.00 38.35 2.67
389 390 2.911143 CCGCCTAGCTGGACCATT 59.089 61.111 0.00 0.00 38.35 3.16
390 391 2.946988 TAGCCGCCTAGCTGGACCAT 62.947 60.000 0.00 0.00 44.67 3.55
391 392 3.672338 TAGCCGCCTAGCTGGACCA 62.672 63.158 0.00 0.00 44.67 4.02
392 393 2.838225 TAGCCGCCTAGCTGGACC 60.838 66.667 0.00 0.00 44.67 4.46
393 394 2.731374 CTAGCCGCCTAGCTGGAC 59.269 66.667 0.00 0.00 43.55 4.02
394 395 2.521950 CCTAGCCGCCTAGCTGGA 60.522 66.667 0.00 0.00 43.55 3.86
395 396 3.620785 CCCTAGCCGCCTAGCTGG 61.621 72.222 0.00 0.00 44.67 4.85
396 397 1.113517 TAACCCTAGCCGCCTAGCTG 61.114 60.000 0.00 0.00 44.67 4.24
398 399 1.114119 AGTAACCCTAGCCGCCTAGC 61.114 60.000 0.00 0.00 39.81 3.42
399 400 0.960286 GAGTAACCCTAGCCGCCTAG 59.040 60.000 0.00 0.00 40.64 3.02
400 401 0.468771 GGAGTAACCCTAGCCGCCTA 60.469 60.000 0.00 0.00 0.00 3.93
401 402 1.761271 GGAGTAACCCTAGCCGCCT 60.761 63.158 0.00 0.00 0.00 5.52
402 403 1.746322 GAGGAGTAACCCTAGCCGCC 61.746 65.000 0.00 0.00 40.05 6.13
403 404 0.756070 AGAGGAGTAACCCTAGCCGC 60.756 60.000 0.00 0.00 40.05 6.53
404 405 1.133730 AGAGAGGAGTAACCCTAGCCG 60.134 57.143 0.00 0.00 40.05 5.52
405 406 2.589720 GAGAGAGGAGTAACCCTAGCC 58.410 57.143 0.00 0.00 40.05 3.93
406 407 2.223745 CGAGAGAGGAGTAACCCTAGC 58.776 57.143 0.00 0.00 40.05 3.42
407 408 3.207778 CACGAGAGAGGAGTAACCCTAG 58.792 54.545 0.00 0.00 40.05 3.02
408 409 2.575279 ACACGAGAGAGGAGTAACCCTA 59.425 50.000 0.00 0.00 40.05 3.53
409 410 1.355043 ACACGAGAGAGGAGTAACCCT 59.645 52.381 0.00 0.00 40.05 4.34
410 411 1.473278 CACACGAGAGAGGAGTAACCC 59.527 57.143 0.00 0.00 40.05 4.11
411 412 2.434428 TCACACGAGAGAGGAGTAACC 58.566 52.381 0.00 0.00 39.35 2.85
412 413 3.502979 AGTTCACACGAGAGAGGAGTAAC 59.497 47.826 0.00 0.00 0.00 2.50
413 414 3.752222 GAGTTCACACGAGAGAGGAGTAA 59.248 47.826 0.00 0.00 0.00 2.24
414 415 3.008157 AGAGTTCACACGAGAGAGGAGTA 59.992 47.826 0.00 0.00 0.00 2.59
415 416 2.156098 GAGTTCACACGAGAGAGGAGT 58.844 52.381 0.00 0.00 0.00 3.85
416 417 2.161410 CAGAGTTCACACGAGAGAGGAG 59.839 54.545 0.00 0.00 0.00 3.69
417 418 2.155279 CAGAGTTCACACGAGAGAGGA 58.845 52.381 0.00 0.00 0.00 3.71
418 419 2.155279 TCAGAGTTCACACGAGAGAGG 58.845 52.381 0.00 0.00 0.00 3.69
419 420 3.820689 CTTCAGAGTTCACACGAGAGAG 58.179 50.000 0.00 0.00 0.00 3.20
420 421 2.030717 GCTTCAGAGTTCACACGAGAGA 60.031 50.000 0.00 0.00 0.00 3.10
421 422 2.323959 GCTTCAGAGTTCACACGAGAG 58.676 52.381 0.00 0.00 0.00 3.20
422 423 1.335051 CGCTTCAGAGTTCACACGAGA 60.335 52.381 0.00 0.00 0.00 4.04
423 424 1.056103 CGCTTCAGAGTTCACACGAG 58.944 55.000 0.00 0.00 0.00 4.18
424 425 0.666374 TCGCTTCAGAGTTCACACGA 59.334 50.000 0.00 0.00 0.00 4.35
425 426 1.056103 CTCGCTTCAGAGTTCACACG 58.944 55.000 0.00 0.00 33.75 4.49
426 427 1.000163 TCCTCGCTTCAGAGTTCACAC 60.000 52.381 0.00 0.00 36.56 3.82
427 428 1.328279 TCCTCGCTTCAGAGTTCACA 58.672 50.000 0.00 0.00 36.56 3.58
428 429 2.062519 GTTCCTCGCTTCAGAGTTCAC 58.937 52.381 0.00 0.00 36.56 3.18
429 430 1.335964 CGTTCCTCGCTTCAGAGTTCA 60.336 52.381 0.00 0.00 36.56 3.18
430 431 1.341606 CGTTCCTCGCTTCAGAGTTC 58.658 55.000 0.00 0.00 36.56 3.01
431 432 0.038159 CCGTTCCTCGCTTCAGAGTT 60.038 55.000 0.00 0.00 36.56 3.01
432 433 0.894184 TCCGTTCCTCGCTTCAGAGT 60.894 55.000 0.00 0.00 36.56 3.24
433 434 0.179150 CTCCGTTCCTCGCTTCAGAG 60.179 60.000 0.00 0.00 38.35 3.35
434 435 1.595993 CCTCCGTTCCTCGCTTCAGA 61.596 60.000 0.00 0.00 38.35 3.27
435 436 1.153745 CCTCCGTTCCTCGCTTCAG 60.154 63.158 0.00 0.00 38.35 3.02
436 437 0.970937 ATCCTCCGTTCCTCGCTTCA 60.971 55.000 0.00 0.00 38.35 3.02
437 438 0.175989 AATCCTCCGTTCCTCGCTTC 59.824 55.000 0.00 0.00 38.35 3.86
438 439 0.108138 CAATCCTCCGTTCCTCGCTT 60.108 55.000 0.00 0.00 38.35 4.68
439 440 0.970937 TCAATCCTCCGTTCCTCGCT 60.971 55.000 0.00 0.00 38.35 4.93
440 441 0.806492 GTCAATCCTCCGTTCCTCGC 60.806 60.000 0.00 0.00 38.35 5.03
441 442 0.179108 GGTCAATCCTCCGTTCCTCG 60.179 60.000 0.00 0.00 39.52 4.63
442 443 0.179108 CGGTCAATCCTCCGTTCCTC 60.179 60.000 0.00 0.00 41.58 3.71
443 444 1.898154 CGGTCAATCCTCCGTTCCT 59.102 57.895 0.00 0.00 41.58 3.36
444 445 4.515404 CGGTCAATCCTCCGTTCC 57.485 61.111 0.00 0.00 41.58 3.62
449 450 2.235402 TCCAGTAAACGGTCAATCCTCC 59.765 50.000 0.00 0.00 0.00 4.30
450 451 3.056035 ACTCCAGTAAACGGTCAATCCTC 60.056 47.826 0.00 0.00 0.00 3.71
451 452 2.904434 ACTCCAGTAAACGGTCAATCCT 59.096 45.455 0.00 0.00 0.00 3.24
452 453 3.056035 AGACTCCAGTAAACGGTCAATCC 60.056 47.826 0.00 0.00 0.00 3.01
453 454 3.927142 CAGACTCCAGTAAACGGTCAATC 59.073 47.826 0.00 0.00 0.00 2.67
454 455 3.306780 CCAGACTCCAGTAAACGGTCAAT 60.307 47.826 0.00 0.00 0.00 2.57
455 456 2.036733 CCAGACTCCAGTAAACGGTCAA 59.963 50.000 0.00 0.00 0.00 3.18
456 457 1.616865 CCAGACTCCAGTAAACGGTCA 59.383 52.381 0.00 0.00 0.00 4.02
457 458 1.891150 TCCAGACTCCAGTAAACGGTC 59.109 52.381 0.00 0.00 0.00 4.79
458 459 1.893801 CTCCAGACTCCAGTAAACGGT 59.106 52.381 0.00 0.00 0.00 4.83
459 460 1.204941 CCTCCAGACTCCAGTAAACGG 59.795 57.143 0.00 0.00 0.00 4.44
460 461 1.893801 ACCTCCAGACTCCAGTAAACG 59.106 52.381 0.00 0.00 0.00 3.60
461 462 2.094649 CGACCTCCAGACTCCAGTAAAC 60.095 54.545 0.00 0.00 0.00 2.01
462 463 2.168496 CGACCTCCAGACTCCAGTAAA 58.832 52.381 0.00 0.00 0.00 2.01
463 464 1.353358 TCGACCTCCAGACTCCAGTAA 59.647 52.381 0.00 0.00 0.00 2.24
464 465 0.989602 TCGACCTCCAGACTCCAGTA 59.010 55.000 0.00 0.00 0.00 2.74
465 466 0.322997 CTCGACCTCCAGACTCCAGT 60.323 60.000 0.00 0.00 0.00 4.00
466 467 0.034960 TCTCGACCTCCAGACTCCAG 60.035 60.000 0.00 0.00 0.00 3.86
467 468 0.404426 TTCTCGACCTCCAGACTCCA 59.596 55.000 0.00 0.00 0.00 3.86
468 469 1.099689 CTTCTCGACCTCCAGACTCC 58.900 60.000 0.00 0.00 0.00 3.85
469 470 0.454196 GCTTCTCGACCTCCAGACTC 59.546 60.000 0.00 0.00 0.00 3.36
470 471 0.968393 GGCTTCTCGACCTCCAGACT 60.968 60.000 0.00 0.00 0.00 3.24
471 472 0.968393 AGGCTTCTCGACCTCCAGAC 60.968 60.000 0.00 0.00 0.00 3.51
472 473 0.967887 CAGGCTTCTCGACCTCCAGA 60.968 60.000 0.00 0.00 32.56 3.86
473 474 1.515020 CAGGCTTCTCGACCTCCAG 59.485 63.158 0.00 0.00 32.56 3.86
474 475 2.650116 GCAGGCTTCTCGACCTCCA 61.650 63.158 0.00 0.00 32.56 3.86
475 476 2.185608 GCAGGCTTCTCGACCTCC 59.814 66.667 0.00 0.00 32.56 4.30
476 477 1.140804 GAGCAGGCTTCTCGACCTC 59.859 63.158 0.00 0.00 32.56 3.85
477 478 3.293702 GAGCAGGCTTCTCGACCT 58.706 61.111 0.00 0.00 36.45 3.85
482 483 2.125912 TTCGCGAGCAGGCTTCTC 60.126 61.111 9.59 3.90 0.00 2.87
483 484 2.433318 GTTCGCGAGCAGGCTTCT 60.433 61.111 18.62 0.00 0.00 2.85
484 485 2.738521 TGTTCGCGAGCAGGCTTC 60.739 61.111 22.26 1.25 0.00 3.86
485 486 3.044305 GTGTTCGCGAGCAGGCTT 61.044 61.111 26.43 0.00 0.00 4.35
486 487 4.299547 TGTGTTCGCGAGCAGGCT 62.300 61.111 26.43 0.00 0.00 4.58
487 488 3.782244 CTGTGTTCGCGAGCAGGC 61.782 66.667 26.43 15.67 0.00 4.85
488 489 3.114616 CCTGTGTTCGCGAGCAGG 61.115 66.667 28.77 28.77 41.89 4.85
489 490 1.416813 GATCCTGTGTTCGCGAGCAG 61.417 60.000 26.43 23.82 0.00 4.24
490 491 1.446099 GATCCTGTGTTCGCGAGCA 60.446 57.895 22.26 22.26 0.00 4.26
491 492 2.508891 CGATCCTGTGTTCGCGAGC 61.509 63.158 16.69 16.69 0.00 5.03
492 493 2.508891 GCGATCCTGTGTTCGCGAG 61.509 63.158 9.59 0.00 46.14 5.03
493 494 2.506217 GCGATCCTGTGTTCGCGA 60.506 61.111 3.71 3.71 46.14 5.87
496 497 0.926155 CAGATGCGATCCTGTGTTCG 59.074 55.000 0.00 0.00 36.89 3.95
497 498 1.293924 CCAGATGCGATCCTGTGTTC 58.706 55.000 0.00 0.00 0.00 3.18
498 499 0.745845 GCCAGATGCGATCCTGTGTT 60.746 55.000 0.00 0.00 0.00 3.32
499 500 1.153289 GCCAGATGCGATCCTGTGT 60.153 57.895 0.00 0.00 0.00 3.72
500 501 1.890979 GGCCAGATGCGATCCTGTG 60.891 63.158 0.00 0.00 42.61 3.66
501 502 2.507944 GGCCAGATGCGATCCTGT 59.492 61.111 0.00 0.00 42.61 4.00
502 503 2.281345 GGGCCAGATGCGATCCTG 60.281 66.667 4.39 0.00 42.61 3.86
503 504 1.713005 ATTGGGCCAGATGCGATCCT 61.713 55.000 6.23 0.00 42.61 3.24
504 505 0.825010 AATTGGGCCAGATGCGATCC 60.825 55.000 6.23 0.00 42.61 3.36
505 506 1.808945 CTAATTGGGCCAGATGCGATC 59.191 52.381 6.23 0.00 42.61 3.69
506 507 1.546323 CCTAATTGGGCCAGATGCGAT 60.546 52.381 6.23 0.00 42.61 4.58
507 508 0.179020 CCTAATTGGGCCAGATGCGA 60.179 55.000 6.23 0.00 42.61 5.10
508 509 1.799258 GCCTAATTGGGCCAGATGCG 61.799 60.000 21.60 0.00 45.92 4.73
509 510 2.044452 GCCTAATTGGGCCAGATGC 58.956 57.895 21.60 2.97 45.92 3.91
517 518 1.339929 GCGTTATTGGGCCTAATTGGG 59.660 52.381 20.47 10.05 36.00 4.12
518 519 1.001815 CGCGTTATTGGGCCTAATTGG 60.002 52.381 20.47 10.39 39.35 3.16
519 520 1.001815 CCGCGTTATTGGGCCTAATTG 60.002 52.381 20.47 11.27 0.00 2.32
520 521 1.314730 CCGCGTTATTGGGCCTAATT 58.685 50.000 20.47 4.42 0.00 1.40
521 522 0.536460 CCCGCGTTATTGGGCCTAAT 60.536 55.000 19.21 19.21 38.90 1.73
522 523 1.153127 CCCGCGTTATTGGGCCTAA 60.153 57.895 3.11 3.11 38.90 2.69
523 524 2.065185 TCCCGCGTTATTGGGCCTA 61.065 57.895 4.92 0.00 45.60 3.93
524 525 3.404438 TCCCGCGTTATTGGGCCT 61.404 61.111 4.92 0.00 45.60 5.19
525 526 3.206957 GTCCCGCGTTATTGGGCC 61.207 66.667 4.92 0.00 45.60 5.80
526 527 3.569690 CGTCCCGCGTTATTGGGC 61.570 66.667 4.92 0.00 45.60 5.36
536 537 1.395954 GAAAAACCATCTACGTCCCGC 59.604 52.381 0.00 0.00 0.00 6.13
537 538 2.968675 AGAAAAACCATCTACGTCCCG 58.031 47.619 0.00 0.00 0.00 5.14
538 539 4.576879 AGAAGAAAAACCATCTACGTCCC 58.423 43.478 0.00 0.00 0.00 4.46
539 540 4.326548 CGAGAAGAAAAACCATCTACGTCC 59.673 45.833 0.00 0.00 0.00 4.79
540 541 4.922103 ACGAGAAGAAAAACCATCTACGTC 59.078 41.667 0.00 0.00 31.19 4.34
541 542 4.684703 CACGAGAAGAAAAACCATCTACGT 59.315 41.667 0.00 0.00 34.36 3.57
542 543 4.921515 TCACGAGAAGAAAAACCATCTACG 59.078 41.667 0.00 0.00 0.00 3.51
543 544 6.969828 ATCACGAGAAGAAAAACCATCTAC 57.030 37.500 0.00 0.00 0.00 2.59
544 545 7.979444 AAATCACGAGAAGAAAAACCATCTA 57.021 32.000 0.00 0.00 0.00 1.98
545 546 6.884280 AAATCACGAGAAGAAAAACCATCT 57.116 33.333 0.00 0.00 0.00 2.90
546 547 7.647715 TGAAAAATCACGAGAAGAAAAACCATC 59.352 33.333 0.00 0.00 0.00 3.51
547 548 7.488322 TGAAAAATCACGAGAAGAAAAACCAT 58.512 30.769 0.00 0.00 0.00 3.55
548 549 6.857956 TGAAAAATCACGAGAAGAAAAACCA 58.142 32.000 0.00 0.00 0.00 3.67
549 550 7.149128 CGATGAAAAATCACGAGAAGAAAAACC 60.149 37.037 0.00 0.00 0.00 3.27
550 551 7.586300 TCGATGAAAAATCACGAGAAGAAAAAC 59.414 33.333 0.00 0.00 0.00 2.43
551 552 7.635423 TCGATGAAAAATCACGAGAAGAAAAA 58.365 30.769 0.00 0.00 0.00 1.94
552 553 7.184800 TCGATGAAAAATCACGAGAAGAAAA 57.815 32.000 0.00 0.00 0.00 2.29
553 554 6.779115 TCGATGAAAAATCACGAGAAGAAA 57.221 33.333 0.00 0.00 0.00 2.52
554 555 6.183360 CCATCGATGAAAAATCACGAGAAGAA 60.183 38.462 26.86 0.00 36.49 2.52
555 556 5.291858 CCATCGATGAAAAATCACGAGAAGA 59.708 40.000 26.86 0.00 36.49 2.87
556 557 5.291858 TCCATCGATGAAAAATCACGAGAAG 59.708 40.000 26.86 4.03 36.49 2.85
557 558 5.175127 TCCATCGATGAAAAATCACGAGAA 58.825 37.500 26.86 0.00 36.49 2.87
558 559 4.754322 TCCATCGATGAAAAATCACGAGA 58.246 39.130 26.86 7.66 36.49 4.04
559 560 5.663795 ATCCATCGATGAAAAATCACGAG 57.336 39.130 26.86 5.32 36.49 4.18
560 561 5.817296 AGAATCCATCGATGAAAAATCACGA 59.183 36.000 26.86 11.83 37.39 4.35
561 562 5.905733 CAGAATCCATCGATGAAAAATCACG 59.094 40.000 26.86 6.58 0.00 4.35
562 563 6.690098 CACAGAATCCATCGATGAAAAATCAC 59.310 38.462 26.86 9.08 0.00 3.06
563 564 6.678655 GCACAGAATCCATCGATGAAAAATCA 60.679 38.462 26.86 1.83 0.00 2.57
564 565 5.684626 GCACAGAATCCATCGATGAAAAATC 59.315 40.000 26.86 15.58 0.00 2.17
565 566 5.585390 GCACAGAATCCATCGATGAAAAAT 58.415 37.500 26.86 11.15 0.00 1.82
566 567 4.437255 CGCACAGAATCCATCGATGAAAAA 60.437 41.667 26.86 9.33 0.00 1.94
567 568 3.063861 CGCACAGAATCCATCGATGAAAA 59.936 43.478 26.86 11.82 0.00 2.29
568 569 2.609002 CGCACAGAATCCATCGATGAAA 59.391 45.455 26.86 14.35 0.00 2.69
569 570 2.204237 CGCACAGAATCCATCGATGAA 58.796 47.619 26.86 6.95 0.00 2.57
570 571 1.136891 ACGCACAGAATCCATCGATGA 59.863 47.619 26.86 12.92 0.00 2.92
571 572 1.575244 ACGCACAGAATCCATCGATG 58.425 50.000 18.76 18.76 0.00 3.84
572 573 3.667497 ATACGCACAGAATCCATCGAT 57.333 42.857 0.00 0.00 0.00 3.59
573 574 3.316868 TGTATACGCACAGAATCCATCGA 59.683 43.478 0.00 0.00 0.00 3.59
574 575 3.638484 TGTATACGCACAGAATCCATCG 58.362 45.455 0.00 0.00 0.00 3.84
575 576 6.645003 TGTAATGTATACGCACAGAATCCATC 59.355 38.462 0.00 0.00 0.00 3.51
576 577 6.521162 TGTAATGTATACGCACAGAATCCAT 58.479 36.000 0.00 0.00 0.00 3.41
577 578 5.908341 TGTAATGTATACGCACAGAATCCA 58.092 37.500 0.00 0.00 0.00 3.41
578 579 8.703604 ATATGTAATGTATACGCACAGAATCC 57.296 34.615 9.13 0.00 0.00 3.01
580 581 9.285770 CGTATATGTAATGTATACGCACAGAAT 57.714 33.333 11.28 7.90 45.63 2.40
581 582 8.663771 CGTATATGTAATGTATACGCACAGAA 57.336 34.615 11.28 2.67 45.63 3.02
619 620 4.040339 ACCTTGATTTGGAGCGGAATTTTT 59.960 37.500 0.00 0.00 0.00 1.94
620 621 3.578282 ACCTTGATTTGGAGCGGAATTTT 59.422 39.130 0.00 0.00 0.00 1.82
621 622 3.165071 ACCTTGATTTGGAGCGGAATTT 58.835 40.909 0.00 0.00 0.00 1.82
622 623 2.807676 ACCTTGATTTGGAGCGGAATT 58.192 42.857 0.00 0.00 0.00 2.17
623 624 2.514458 ACCTTGATTTGGAGCGGAAT 57.486 45.000 0.00 0.00 0.00 3.01
624 625 2.355716 CCTACCTTGATTTGGAGCGGAA 60.356 50.000 0.00 0.00 0.00 4.30
625 626 1.209504 CCTACCTTGATTTGGAGCGGA 59.790 52.381 0.00 0.00 0.00 5.54
626 627 1.668419 CCTACCTTGATTTGGAGCGG 58.332 55.000 0.00 0.00 0.00 5.52
627 628 1.668419 CCCTACCTTGATTTGGAGCG 58.332 55.000 0.00 0.00 0.00 5.03
628 629 1.393603 GCCCTACCTTGATTTGGAGC 58.606 55.000 0.00 0.00 0.00 4.70
629 630 1.209504 TCGCCCTACCTTGATTTGGAG 59.790 52.381 0.00 0.00 0.00 3.86
630 631 1.209504 CTCGCCCTACCTTGATTTGGA 59.790 52.381 0.00 0.00 0.00 3.53
631 632 1.668419 CTCGCCCTACCTTGATTTGG 58.332 55.000 0.00 0.00 0.00 3.28
632 633 1.017387 GCTCGCCCTACCTTGATTTG 58.983 55.000 0.00 0.00 0.00 2.32
633 634 0.462047 CGCTCGCCCTACCTTGATTT 60.462 55.000 0.00 0.00 0.00 2.17
634 635 1.144057 CGCTCGCCCTACCTTGATT 59.856 57.895 0.00 0.00 0.00 2.57
635 636 2.815308 CGCTCGCCCTACCTTGAT 59.185 61.111 0.00 0.00 0.00 2.57
636 637 4.143333 GCGCTCGCCCTACCTTGA 62.143 66.667 0.00 0.00 34.56 3.02
651 652 4.814294 GTAGGGCGAGGTGTGGCG 62.814 72.222 0.00 0.00 0.00 5.69
652 653 4.468689 GGTAGGGCGAGGTGTGGC 62.469 72.222 0.00 0.00 0.00 5.01
653 654 4.143333 CGGTAGGGCGAGGTGTGG 62.143 72.222 0.00 0.00 0.00 4.17
654 655 4.143333 CCGGTAGGGCGAGGTGTG 62.143 72.222 0.00 0.00 0.00 3.82
670 671 2.501610 GACACAGGCGGAGATCCC 59.498 66.667 0.00 0.00 0.00 3.85
671 672 2.501610 GGACACAGGCGGAGATCC 59.498 66.667 0.00 0.00 0.00 3.36
672 673 1.899437 TTGGGACACAGGCGGAGATC 61.899 60.000 0.00 0.00 39.29 2.75
673 674 1.918293 TTGGGACACAGGCGGAGAT 60.918 57.895 0.00 0.00 39.29 2.75
674 675 2.525629 TTGGGACACAGGCGGAGA 60.526 61.111 0.00 0.00 39.29 3.71
675 676 2.358737 GTTGGGACACAGGCGGAG 60.359 66.667 0.00 0.00 39.29 4.63
676 677 3.164977 TGTTGGGACACAGGCGGA 61.165 61.111 0.00 0.00 39.29 5.54
684 685 1.073125 CACCAGGTATGTGTTGGGACA 59.927 52.381 0.00 0.00 36.28 4.02
685 686 1.821216 CACCAGGTATGTGTTGGGAC 58.179 55.000 0.00 0.00 36.28 4.46
686 687 0.037590 GCACCAGGTATGTGTTGGGA 59.962 55.000 0.00 0.00 36.28 4.37
687 688 0.965363 GGCACCAGGTATGTGTTGGG 60.965 60.000 0.00 0.00 36.28 4.12
688 689 2.566824 GGCACCAGGTATGTGTTGG 58.433 57.895 0.00 0.00 36.11 3.77
738 739 2.851263 TTACGGGTCAATGCAAGAGT 57.149 45.000 0.00 0.00 0.00 3.24
799 804 3.573772 CTCGTCTCGCTGTTGCCCA 62.574 63.158 0.00 0.00 35.36 5.36
987 1038 1.079543 GGCCATCTCATCCGATCGG 60.080 63.158 28.62 28.62 0.00 4.18
1087 1138 1.050988 CCGGAGATGGAGTGATGGGT 61.051 60.000 0.00 0.00 0.00 4.51
1089 1140 0.833287 AACCGGAGATGGAGTGATGG 59.167 55.000 9.46 0.00 0.00 3.51
1090 1141 1.208052 ACAACCGGAGATGGAGTGATG 59.792 52.381 9.46 0.00 0.00 3.07
1092 1143 0.895530 GACAACCGGAGATGGAGTGA 59.104 55.000 9.46 0.00 0.00 3.41
1112 1163 3.418047 ACCCGTCCAGGAGTTAAAAATG 58.582 45.455 0.00 0.00 45.00 2.32
1114 1165 3.581265 AACCCGTCCAGGAGTTAAAAA 57.419 42.857 0.00 0.00 45.00 1.94
1119 1170 1.064825 ATGAAACCCGTCCAGGAGTT 58.935 50.000 0.00 0.00 45.00 3.01
1181 1239 1.330521 CGCCATTAGACCGTGGATTTG 59.669 52.381 0.00 0.00 37.72 2.32
1184 1242 1.227556 GCGCCATTAGACCGTGGAT 60.228 57.895 0.00 0.00 37.72 3.41
1185 1243 2.173758 TTGCGCCATTAGACCGTGGA 62.174 55.000 4.18 0.00 37.72 4.02
1203 1261 2.622546 ATCAATTTAACCGCGCGTTT 57.377 40.000 29.95 24.32 35.79 3.60
1210 1268 8.964420 AATAACACTGTGAATCAATTTAACCG 57.036 30.769 15.86 0.00 0.00 4.44
1224 1282 5.177511 TCGCTCTTTGAAGAATAACACTGTG 59.822 40.000 6.19 6.19 34.03 3.66
1240 1298 4.083110 CCTCATGTTCACATTTCGCTCTTT 60.083 41.667 0.00 0.00 33.61 2.52
1282 1344 6.696411 AGAAGAATCACTAGGAGTTTGACAG 58.304 40.000 0.00 0.00 0.00 3.51
1398 1470 1.966451 CTTGGCGCCGGAGTTCTTT 60.966 57.895 23.90 0.00 0.00 2.52
1779 1885 0.386858 TCTGCGAGTTGAGCACGTAC 60.387 55.000 0.00 0.00 40.01 3.67
1854 1960 2.203523 TCGTGGTTCACCCCGAGA 60.204 61.111 0.00 0.00 32.97 4.04
2091 2204 1.114627 CCGTCATCATCCTCCACTCA 58.885 55.000 0.00 0.00 0.00 3.41
2426 2622 1.202428 GCACGAAGGAGAGGACCATAC 60.202 57.143 0.00 0.00 0.00 2.39
2472 2668 3.366273 GCTAAGAGATGATCAGGAGAGCG 60.366 52.174 0.09 0.00 31.29 5.03
2522 2720 9.402320 TCCTGCAACATAGTATTAGCAAATTAA 57.598 29.630 0.00 0.00 0.00 1.40
2523 2721 8.972458 TCCTGCAACATAGTATTAGCAAATTA 57.028 30.769 0.00 0.00 0.00 1.40
2524 2722 7.880160 TCCTGCAACATAGTATTAGCAAATT 57.120 32.000 0.00 0.00 0.00 1.82
2525 2723 8.469309 AATCCTGCAACATAGTATTAGCAAAT 57.531 30.769 0.00 0.00 0.00 2.32
2631 2855 8.898761 ACGTGTGGCATTTATTATTTGAGAATA 58.101 29.630 0.00 0.00 0.00 1.75
2632 2856 7.771183 ACGTGTGGCATTTATTATTTGAGAAT 58.229 30.769 0.00 0.00 0.00 2.40
2633 2857 7.094592 TGACGTGTGGCATTTATTATTTGAGAA 60.095 33.333 0.00 0.00 0.00 2.87
2634 2858 6.372937 TGACGTGTGGCATTTATTATTTGAGA 59.627 34.615 0.00 0.00 0.00 3.27
2635 2859 6.550843 TGACGTGTGGCATTTATTATTTGAG 58.449 36.000 0.00 0.00 0.00 3.02
2636 2860 6.404184 CCTGACGTGTGGCATTTATTATTTGA 60.404 38.462 0.00 0.00 0.00 2.69
2637 2861 5.743398 CCTGACGTGTGGCATTTATTATTTG 59.257 40.000 0.00 0.00 0.00 2.32
2638 2862 5.650266 TCCTGACGTGTGGCATTTATTATTT 59.350 36.000 0.00 0.00 0.00 1.40
2639 2863 5.189928 TCCTGACGTGTGGCATTTATTATT 58.810 37.500 0.00 0.00 0.00 1.40
2640 2864 4.776349 TCCTGACGTGTGGCATTTATTAT 58.224 39.130 0.00 0.00 0.00 1.28
2641 2865 4.209307 TCCTGACGTGTGGCATTTATTA 57.791 40.909 0.00 0.00 0.00 0.98
2642 2866 3.066291 TCCTGACGTGTGGCATTTATT 57.934 42.857 0.00 0.00 0.00 1.40
2643 2867 2.779755 TCCTGACGTGTGGCATTTAT 57.220 45.000 0.00 0.00 0.00 1.40
2644 2868 2.552599 TTCCTGACGTGTGGCATTTA 57.447 45.000 0.00 0.00 0.00 1.40
2645 2869 1.909700 ATTCCTGACGTGTGGCATTT 58.090 45.000 0.00 0.00 0.00 2.32
2646 2870 1.909700 AATTCCTGACGTGTGGCATT 58.090 45.000 0.00 0.00 0.00 3.56
2647 2871 1.909700 AAATTCCTGACGTGTGGCAT 58.090 45.000 0.00 0.00 0.00 4.40
2648 2872 2.037902 TCTAAATTCCTGACGTGTGGCA 59.962 45.455 0.00 0.00 0.00 4.92
2649 2873 2.695359 TCTAAATTCCTGACGTGTGGC 58.305 47.619 0.00 0.00 0.00 5.01
2650 2874 6.761242 TGAATATCTAAATTCCTGACGTGTGG 59.239 38.462 0.00 0.00 35.40 4.17
2654 2878 6.483640 GGCTTGAATATCTAAATTCCTGACGT 59.516 38.462 0.00 0.00 35.40 4.34
2655 2879 6.346919 CGGCTTGAATATCTAAATTCCTGACG 60.347 42.308 0.00 0.00 35.40 4.35
2658 2882 7.355778 GTTCGGCTTGAATATCTAAATTCCTG 58.644 38.462 0.00 0.00 39.21 3.86
2666 2890 4.380841 ACACGTTCGGCTTGAATATCTA 57.619 40.909 0.00 0.00 39.21 1.98
2676 2900 2.280592 GGTCCAACACGTTCGGCT 60.281 61.111 0.00 0.00 0.00 5.52
2695 2921 2.708216 TTCATGCGCCCAGAATCTAA 57.292 45.000 4.18 0.00 0.00 2.10
2711 2937 5.406477 GTCACGCTATATGCATCAAGATTCA 59.594 40.000 0.19 0.00 43.06 2.57
2740 2966 2.415776 ACGCCCGAACGAAAAATTCTA 58.584 42.857 4.02 0.00 36.70 2.10
2745 2971 0.873743 ACGTACGCCCGAACGAAAAA 60.874 50.000 16.72 0.00 41.55 1.94
2763 2989 3.554692 CATTCGGCGGCTCGACAC 61.555 66.667 7.21 0.00 39.01 3.67
2764 2990 4.812476 CCATTCGGCGGCTCGACA 62.812 66.667 7.21 5.89 39.01 4.35
2779 3005 3.296709 GAGGAAAGAGCGGTCGCCA 62.297 63.158 20.62 0.00 43.17 5.69
2782 3008 0.458716 GGAAGAGGAAAGAGCGGTCG 60.459 60.000 9.28 0.00 0.00 4.79
2832 3062 2.790433 AGTGCCTAAAAAGGATGCGAA 58.210 42.857 0.00 0.00 0.00 4.70
2834 3064 3.244976 CAAAGTGCCTAAAAAGGATGCG 58.755 45.455 0.00 0.00 0.00 4.73
2840 3070 5.754890 ACAAGATTGCAAAGTGCCTAAAAAG 59.245 36.000 1.71 0.00 44.23 2.27
2865 3095 4.200092 GCCCTTTTTCTACTAGTGATGGG 58.800 47.826 5.39 8.33 0.00 4.00
2866 3096 4.080299 AGGCCCTTTTTCTACTAGTGATGG 60.080 45.833 5.39 0.00 0.00 3.51
2867 3097 5.104259 AGGCCCTTTTTCTACTAGTGATG 57.896 43.478 5.39 0.00 0.00 3.07
2902 3132 1.550130 CGGGTCAGAAGGCCCTTACA 61.550 60.000 0.00 0.00 42.67 2.41
2928 3158 6.643388 AGTAACGATATTTTAGTCCCGGTTT 58.357 36.000 0.00 0.00 0.00 3.27
2943 3173 4.652421 AGGCCAAGGACATTAGTAACGATA 59.348 41.667 5.01 0.00 0.00 2.92
2957 3188 1.559065 CCGGGACTAAAGGCCAAGGA 61.559 60.000 5.01 0.00 0.00 3.36
2986 3217 1.201429 AGGCCCATCTGTCTCGGTTT 61.201 55.000 0.00 0.00 0.00 3.27
3041 3276 2.152016 GTCACCAACCAGGACTAAAGC 58.848 52.381 0.00 0.00 41.22 3.51
3071 3306 1.665442 GCGTGGATGCCTTTTGGTT 59.335 52.632 0.00 0.00 42.99 3.67
3194 3456 3.199071 TGGTAAACCAAGCACGGAGATAT 59.801 43.478 0.00 0.00 44.35 1.63
3195 3457 2.568062 TGGTAAACCAAGCACGGAGATA 59.432 45.455 0.00 0.00 44.35 1.98
3236 3515 2.536365 TCAATCTAAGCCGTGTTAGCG 58.464 47.619 0.00 0.00 34.64 4.26
3237 3516 3.933332 ACTTCAATCTAAGCCGTGTTAGC 59.067 43.478 0.00 0.00 31.10 3.09
3238 3517 5.168569 TCACTTCAATCTAAGCCGTGTTAG 58.831 41.667 0.00 0.00 0.00 2.34
3239 3518 5.142061 TCACTTCAATCTAAGCCGTGTTA 57.858 39.130 0.00 0.00 0.00 2.41
3240 3519 4.002906 TCACTTCAATCTAAGCCGTGTT 57.997 40.909 0.00 0.00 0.00 3.32
3314 3595 5.005779 GCATGTCGAAAGTAGTACAATCCAG 59.994 44.000 2.52 0.00 0.00 3.86
3365 3650 7.202029 GGGTGAAATGAACATGGATTGGATTAT 60.202 37.037 0.00 0.00 0.00 1.28
3366 3651 6.098124 GGGTGAAATGAACATGGATTGGATTA 59.902 38.462 0.00 0.00 0.00 1.75
3367 3652 5.104817 GGGTGAAATGAACATGGATTGGATT 60.105 40.000 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.