Multiple sequence alignment - TraesCS2B01G473300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G473300 chr2B 100.000 3689 0 0 1 3689 670172547 670176235 0.000000e+00 6813.0
1 TraesCS2B01G473300 chr2B 92.724 2199 89 36 866 3024 670340664 670342831 0.000000e+00 3109.0
2 TraesCS2B01G473300 chr2B 94.470 1284 47 9 1633 2896 670445784 670447063 0.000000e+00 1956.0
3 TraesCS2B01G473300 chr2B 85.439 1140 112 27 331 1431 670442552 670443676 0.000000e+00 1136.0
4 TraesCS2B01G473300 chr2B 93.093 333 22 1 458 790 670325586 670325917 1.540000e-133 486.0
5 TraesCS2B01G473300 chr2B 95.238 231 10 1 3459 3689 670293248 670293477 7.530000e-97 364.0
6 TraesCS2B01G473300 chr2B 94.521 73 3 1 3464 3536 670447687 670447758 1.080000e-20 111.0
7 TraesCS2B01G473300 chr2D 95.268 1881 68 4 1047 2906 561055359 561053479 0.000000e+00 2961.0
8 TraesCS2B01G473300 chr2D 90.145 1928 81 41 1229 3106 561323456 561321588 0.000000e+00 2407.0
9 TraesCS2B01G473300 chr2D 95.940 1207 32 3 1050 2256 561288653 561287464 0.000000e+00 1941.0
10 TraesCS2B01G473300 chr2D 84.019 1508 199 26 1052 2538 411954001 411955487 0.000000e+00 1411.0
11 TraesCS2B01G473300 chr2D 87.755 882 64 18 2249 3106 561286998 561286137 0.000000e+00 990.0
12 TraesCS2B01G473300 chr2D 85.474 833 85 18 331 1143 561326937 561326121 0.000000e+00 835.0
13 TraesCS2B01G473300 chr2D 89.583 336 30 5 1 333 72909937 72909604 4.400000e-114 422.0
14 TraesCS2B01G473300 chr2D 78.144 334 69 4 342 672 51422219 51421887 3.730000e-50 209.0
15 TraesCS2B01G473300 chr2D 94.521 73 3 1 3464 3536 561052936 561052865 1.080000e-20 111.0
16 TraesCS2B01G473300 chr2D 97.826 46 1 0 3613 3658 561321267 561321222 3.050000e-11 80.5
17 TraesCS2B01G473300 chr2A 92.398 2039 86 24 843 2848 701034507 701032505 0.000000e+00 2843.0
18 TraesCS2B01G473300 chr2A 93.959 1887 73 10 1052 2906 701018952 701017075 0.000000e+00 2815.0
19 TraesCS2B01G473300 chr2A 83.830 1509 204 21 1050 2538 579440288 579441776 0.000000e+00 1399.0
20 TraesCS2B01G473300 chr2A 86.946 429 46 7 322 746 701058789 701058367 1.200000e-129 473.0
21 TraesCS2B01G473300 chr2A 87.261 157 14 2 2950 3106 701017073 701016923 1.360000e-39 174.0
22 TraesCS2B01G473300 chr2A 85.333 150 19 2 3390 3536 701016672 701016523 6.380000e-33 152.0
23 TraesCS2B01G473300 chrUn 93.906 1887 74 10 1052 2906 210396988 210395111 0.000000e+00 2809.0
24 TraesCS2B01G473300 chrUn 87.261 157 14 2 2950 3106 397099326 397099476 1.360000e-39 174.0
25 TraesCS2B01G473300 chrUn 86.624 157 15 2 2950 3106 210395109 210394959 6.340000e-38 169.0
26 TraesCS2B01G473300 chrUn 85.333 150 19 2 3390 3536 210394708 210394559 6.380000e-33 152.0
27 TraesCS2B01G473300 chrUn 85.333 150 19 2 3390 3536 397099727 397099876 6.380000e-33 152.0
28 TraesCS2B01G473300 chrUn 98.246 57 1 0 2850 2906 397099268 397099324 2.340000e-17 100.0
29 TraesCS2B01G473300 chr1B 89.554 1570 88 30 1476 3002 646053293 646054829 0.000000e+00 1921.0
30 TraesCS2B01G473300 chr4D 91.437 327 28 0 1 327 479598312 479598638 2.020000e-122 449.0
31 TraesCS2B01G473300 chr3D 91.358 324 27 1 1 323 488051380 488051703 3.380000e-120 442.0
32 TraesCS2B01G473300 chr3D 90.854 328 29 1 1 327 505171298 505170971 4.370000e-119 438.0
33 TraesCS2B01G473300 chr3D 89.939 328 31 2 1 327 350087880 350087554 4.400000e-114 422.0
34 TraesCS2B01G473300 chr4B 90.741 324 29 1 1 323 522121437 522121760 7.320000e-117 431.0
35 TraesCS2B01G473300 chr4B 95.294 170 8 0 3162 3331 448896047 448896216 1.690000e-68 270.0
36 TraesCS2B01G473300 chr4B 91.053 190 13 4 3143 3328 510313415 510313226 1.700000e-63 254.0
37 TraesCS2B01G473300 chr4B 82.510 263 46 0 342 604 382722163 382721901 7.970000e-57 231.0
38 TraesCS2B01G473300 chr4A 90.274 329 28 3 1 327 165180186 165180512 9.470000e-116 427.0
39 TraesCS2B01G473300 chr6D 90.373 322 29 2 1 320 444082781 444083102 4.400000e-114 422.0
40 TraesCS2B01G473300 chr6D 95.758 165 7 0 3166 3330 81746768 81746932 2.180000e-67 267.0
41 TraesCS2B01G473300 chr6B 89.939 328 31 2 1 327 507230137 507230463 4.400000e-114 422.0
42 TraesCS2B01G473300 chr6B 78.781 443 77 15 331 765 663539076 663538643 7.800000e-72 281.0
43 TraesCS2B01G473300 chr6B 95.783 166 7 0 3166 3331 468734655 468734820 6.070000e-68 268.0
44 TraesCS2B01G473300 chr7B 100.000 163 0 0 3166 3328 593925600 593925762 5.990000e-78 302.0
45 TraesCS2B01G473300 chr7B 94.798 173 8 1 3166 3337 697802738 697802566 6.070000e-68 268.0
46 TraesCS2B01G473300 chr7B 94.152 171 10 0 3162 3332 741942700 741942530 1.020000e-65 261.0
47 TraesCS2B01G473300 chr3A 95.294 170 7 1 3162 3331 731100712 731100880 6.070000e-68 268.0
48 TraesCS2B01G473300 chr3A 90.306 196 16 3 3144 3338 333306233 333306426 1.700000e-63 254.0
49 TraesCS2B01G473300 chr1D 82.418 273 46 1 332 604 314634931 314635201 1.710000e-58 237.0
50 TraesCS2B01G473300 chr5A 81.071 280 52 1 343 621 442296586 442296865 4.800000e-54 222.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G473300 chr2B 670172547 670176235 3688 False 6813.000000 6813 100.000000 1 3689 1 chr2B.!!$F1 3688
1 TraesCS2B01G473300 chr2B 670340664 670342831 2167 False 3109.000000 3109 92.724000 866 3024 1 chr2B.!!$F4 2158
2 TraesCS2B01G473300 chr2B 670442552 670447758 5206 False 1067.666667 1956 91.476667 331 3536 3 chr2B.!!$F5 3205
3 TraesCS2B01G473300 chr2D 561052865 561055359 2494 True 1536.000000 2961 94.894500 1047 3536 2 chr2D.!!$R3 2489
4 TraesCS2B01G473300 chr2D 561286137 561288653 2516 True 1465.500000 1941 91.847500 1050 3106 2 chr2D.!!$R4 2056
5 TraesCS2B01G473300 chr2D 411954001 411955487 1486 False 1411.000000 1411 84.019000 1052 2538 1 chr2D.!!$F1 1486
6 TraesCS2B01G473300 chr2D 561321222 561326937 5715 True 1107.500000 2407 91.148333 331 3658 3 chr2D.!!$R5 3327
7 TraesCS2B01G473300 chr2A 701032505 701034507 2002 True 2843.000000 2843 92.398000 843 2848 1 chr2A.!!$R1 2005
8 TraesCS2B01G473300 chr2A 579440288 579441776 1488 False 1399.000000 1399 83.830000 1050 2538 1 chr2A.!!$F1 1488
9 TraesCS2B01G473300 chr2A 701016523 701018952 2429 True 1047.000000 2815 88.851000 1052 3536 3 chr2A.!!$R3 2484
10 TraesCS2B01G473300 chrUn 210394559 210396988 2429 True 1043.333333 2809 88.621000 1052 3536 3 chrUn.!!$R1 2484
11 TraesCS2B01G473300 chr1B 646053293 646054829 1536 False 1921.000000 1921 89.554000 1476 3002 1 chr1B.!!$F1 1526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
60 61 0.688487 TGCTAAGCTTACGGTTGGGT 59.312 50.000 0.86 0.00 30.81 4.51 F
1299 3950 1.061411 TTCGTATCGTCTCGGCGTG 59.939 57.895 6.85 4.24 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1389 4040 4.162690 GCCTCCGTCTCCGCCAAT 62.163 66.667 0.0 0.0 0.0 3.16 R
2805 8001 0.115152 TGCCCTTCTCTCTGTCTCCA 59.885 55.000 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 49 9.884465 AATAAATTAAACGATCTGATGCTAAGC 57.116 29.630 0.00 0.00 0.00 3.09
49 50 7.559590 AAATTAAACGATCTGATGCTAAGCT 57.440 32.000 0.00 0.00 0.00 3.74
50 51 7.559590 AATTAAACGATCTGATGCTAAGCTT 57.440 32.000 3.48 3.48 0.00 3.74
51 52 8.662781 AATTAAACGATCTGATGCTAAGCTTA 57.337 30.769 5.94 5.94 0.00 3.09
52 53 5.975410 AAACGATCTGATGCTAAGCTTAC 57.025 39.130 0.86 0.76 0.00 2.34
53 54 3.633235 ACGATCTGATGCTAAGCTTACG 58.367 45.455 0.86 4.03 0.00 3.18
54 55 2.983136 CGATCTGATGCTAAGCTTACGG 59.017 50.000 0.86 0.00 0.00 4.02
55 56 3.551046 CGATCTGATGCTAAGCTTACGGT 60.551 47.826 0.86 0.00 0.00 4.83
56 57 3.887621 TCTGATGCTAAGCTTACGGTT 57.112 42.857 0.86 0.00 34.74 4.44
57 58 3.521560 TCTGATGCTAAGCTTACGGTTG 58.478 45.455 0.86 0.00 32.30 3.77
58 59 2.609459 CTGATGCTAAGCTTACGGTTGG 59.391 50.000 0.86 0.00 32.96 3.77
59 60 1.940613 GATGCTAAGCTTACGGTTGGG 59.059 52.381 0.86 0.00 30.81 4.12
60 61 0.688487 TGCTAAGCTTACGGTTGGGT 59.312 50.000 0.86 0.00 30.81 4.51
61 62 1.338389 TGCTAAGCTTACGGTTGGGTC 60.338 52.381 0.86 0.00 30.81 4.46
62 63 1.066358 GCTAAGCTTACGGTTGGGTCT 60.066 52.381 0.86 0.00 30.81 3.85
63 64 2.167075 GCTAAGCTTACGGTTGGGTCTA 59.833 50.000 0.86 0.00 30.81 2.59
64 65 3.737355 GCTAAGCTTACGGTTGGGTCTAG 60.737 52.174 0.86 0.00 30.81 2.43
65 66 1.934410 AGCTTACGGTTGGGTCTAGT 58.066 50.000 0.00 0.00 0.00 2.57
66 67 1.823610 AGCTTACGGTTGGGTCTAGTC 59.176 52.381 0.00 0.00 0.00 2.59
67 68 1.134877 GCTTACGGTTGGGTCTAGTCC 60.135 57.143 0.00 0.00 0.00 3.85
68 69 2.173519 CTTACGGTTGGGTCTAGTCCA 58.826 52.381 8.34 5.98 0.00 4.02
69 70 2.537633 TACGGTTGGGTCTAGTCCAT 57.462 50.000 8.34 0.00 33.82 3.41
70 71 1.192428 ACGGTTGGGTCTAGTCCATC 58.808 55.000 8.34 7.62 33.82 3.51
71 72 1.191535 CGGTTGGGTCTAGTCCATCA 58.808 55.000 8.34 0.00 33.82 3.07
72 73 1.134788 CGGTTGGGTCTAGTCCATCAC 60.135 57.143 8.34 5.13 33.82 3.06
73 74 1.906574 GGTTGGGTCTAGTCCATCACA 59.093 52.381 8.34 0.00 33.82 3.58
74 75 2.505819 GGTTGGGTCTAGTCCATCACAT 59.494 50.000 8.34 0.00 33.82 3.21
75 76 3.432326 GGTTGGGTCTAGTCCATCACATC 60.432 52.174 8.34 0.00 33.82 3.06
76 77 3.114643 TGGGTCTAGTCCATCACATCA 57.885 47.619 8.34 0.00 0.00 3.07
77 78 3.657610 TGGGTCTAGTCCATCACATCAT 58.342 45.455 8.34 0.00 0.00 2.45
78 79 4.040047 TGGGTCTAGTCCATCACATCATT 58.960 43.478 8.34 0.00 0.00 2.57
79 80 4.101585 TGGGTCTAGTCCATCACATCATTC 59.898 45.833 8.34 0.00 0.00 2.67
80 81 4.346418 GGGTCTAGTCCATCACATCATTCT 59.654 45.833 8.34 0.00 0.00 2.40
81 82 5.540337 GGGTCTAGTCCATCACATCATTCTA 59.460 44.000 8.34 0.00 0.00 2.10
82 83 6.451393 GGTCTAGTCCATCACATCATTCTAC 58.549 44.000 0.64 0.00 0.00 2.59
83 84 6.266558 GGTCTAGTCCATCACATCATTCTACT 59.733 42.308 0.64 0.00 0.00 2.57
84 85 7.448777 GGTCTAGTCCATCACATCATTCTACTA 59.551 40.741 0.64 0.00 0.00 1.82
85 86 8.851145 GTCTAGTCCATCACATCATTCTACTAA 58.149 37.037 0.00 0.00 0.00 2.24
86 87 9.593565 TCTAGTCCATCACATCATTCTACTAAT 57.406 33.333 0.00 0.00 0.00 1.73
87 88 9.636879 CTAGTCCATCACATCATTCTACTAATG 57.363 37.037 0.00 0.00 0.00 1.90
88 89 8.255111 AGTCCATCACATCATTCTACTAATGA 57.745 34.615 3.13 3.13 40.50 2.57
89 90 8.878211 AGTCCATCACATCATTCTACTAATGAT 58.122 33.333 7.28 7.28 45.40 2.45
98 99 6.691508 TCATTCTACTAATGATGTGATCCCG 58.308 40.000 0.00 0.00 32.21 5.14
99 100 6.267699 TCATTCTACTAATGATGTGATCCCGT 59.732 38.462 0.00 0.00 32.21 5.28
100 101 6.479972 TTCTACTAATGATGTGATCCCGTT 57.520 37.500 0.00 0.00 0.00 4.44
101 102 7.591421 TTCTACTAATGATGTGATCCCGTTA 57.409 36.000 0.00 0.00 0.00 3.18
102 103 7.776618 TCTACTAATGATGTGATCCCGTTAT 57.223 36.000 0.00 0.00 0.00 1.89
103 104 7.827701 TCTACTAATGATGTGATCCCGTTATC 58.172 38.462 0.00 0.00 0.00 1.75
104 105 6.419484 ACTAATGATGTGATCCCGTTATCA 57.581 37.500 0.00 0.00 33.48 2.15
105 106 6.826668 ACTAATGATGTGATCCCGTTATCAA 58.173 36.000 0.00 0.00 37.61 2.57
106 107 7.279615 ACTAATGATGTGATCCCGTTATCAAA 58.720 34.615 0.00 0.00 37.61 2.69
107 108 7.939039 ACTAATGATGTGATCCCGTTATCAAAT 59.061 33.333 0.70 0.70 36.67 2.32
108 109 6.564709 ATGATGTGATCCCGTTATCAAATG 57.435 37.500 4.98 0.00 34.56 2.32
109 110 5.679601 TGATGTGATCCCGTTATCAAATGA 58.320 37.500 4.98 0.00 34.56 2.57
110 111 6.298361 TGATGTGATCCCGTTATCAAATGAT 58.702 36.000 4.98 1.01 34.56 2.45
111 112 7.449247 TGATGTGATCCCGTTATCAAATGATA 58.551 34.615 4.98 0.00 34.56 2.15
112 113 7.936301 TGATGTGATCCCGTTATCAAATGATAA 59.064 33.333 10.95 10.95 42.75 1.75
127 128 9.857656 ATCAAATGATAACTCATGTCTATGGTT 57.142 29.630 0.00 0.00 41.34 3.67
130 131 9.784531 AAATGATAACTCATGTCTATGGTTAGG 57.215 33.333 0.00 0.00 41.34 2.69
131 132 8.727100 ATGATAACTCATGTCTATGGTTAGGA 57.273 34.615 0.00 0.00 40.66 2.94
132 133 8.547481 TGATAACTCATGTCTATGGTTAGGAA 57.453 34.615 0.00 0.00 35.44 3.36
133 134 8.988060 TGATAACTCATGTCTATGGTTAGGAAA 58.012 33.333 0.00 0.00 35.44 3.13
134 135 9.262358 GATAACTCATGTCTATGGTTAGGAAAC 57.738 37.037 0.00 0.00 35.44 2.78
155 156 9.503427 GGAAACCTTAATCATCTTTAATCAACG 57.497 33.333 0.00 0.00 0.00 4.10
158 159 9.449719 AACCTTAATCATCTTTAATCAACGAGT 57.550 29.630 0.00 0.00 0.00 4.18
159 160 9.449719 ACCTTAATCATCTTTAATCAACGAGTT 57.550 29.630 0.00 0.00 0.00 3.01
164 165 9.877178 AATCATCTTTAATCAACGAGTTAGTCT 57.123 29.630 0.00 0.00 0.00 3.24
167 168 9.790389 CATCTTTAATCAACGAGTTAGTCTAGT 57.210 33.333 0.00 0.00 33.59 2.57
183 184 4.954875 GTCTAGTAGACGCTTACTAGGGA 58.045 47.826 23.23 10.71 46.84 4.20
184 185 4.749598 GTCTAGTAGACGCTTACTAGGGAC 59.250 50.000 23.23 15.99 46.84 4.46
185 186 3.929955 AGTAGACGCTTACTAGGGACT 57.070 47.619 0.00 0.00 46.37 3.85
186 187 4.233632 AGTAGACGCTTACTAGGGACTT 57.766 45.455 0.00 0.00 41.75 3.01
187 188 3.946558 AGTAGACGCTTACTAGGGACTTG 59.053 47.826 0.00 0.00 41.75 3.16
188 189 3.083122 AGACGCTTACTAGGGACTTGA 57.917 47.619 0.00 0.00 41.75 3.02
189 190 3.633418 AGACGCTTACTAGGGACTTGAT 58.367 45.455 0.00 0.00 41.75 2.57
190 191 4.789807 AGACGCTTACTAGGGACTTGATA 58.210 43.478 0.00 0.00 41.75 2.15
191 192 5.386924 AGACGCTTACTAGGGACTTGATAT 58.613 41.667 0.00 0.00 41.75 1.63
192 193 5.834204 AGACGCTTACTAGGGACTTGATATT 59.166 40.000 0.00 0.00 41.75 1.28
193 194 6.324254 AGACGCTTACTAGGGACTTGATATTT 59.676 38.462 0.00 0.00 41.75 1.40
194 195 6.281405 ACGCTTACTAGGGACTTGATATTTG 58.719 40.000 0.00 0.00 41.75 2.32
195 196 6.127140 ACGCTTACTAGGGACTTGATATTTGT 60.127 38.462 0.00 0.00 41.75 2.83
196 197 6.761714 CGCTTACTAGGGACTTGATATTTGTT 59.238 38.462 0.00 0.00 41.75 2.83
197 198 7.280205 CGCTTACTAGGGACTTGATATTTGTTT 59.720 37.037 0.00 0.00 41.75 2.83
198 199 9.609346 GCTTACTAGGGACTTGATATTTGTTTA 57.391 33.333 0.00 0.00 41.75 2.01
212 213 9.980780 TGATATTTGTTTATGTATTCACACACG 57.019 29.630 0.00 0.00 37.54 4.49
213 214 9.982291 GATATTTGTTTATGTATTCACACACGT 57.018 29.630 0.00 0.00 37.54 4.49
225 226 9.866936 TGTATTCACACACGTATTTAAGTTTTC 57.133 29.630 0.00 0.00 0.00 2.29
226 227 9.033262 GTATTCACACACGTATTTAAGTTTTCG 57.967 33.333 0.00 0.00 0.00 3.46
227 228 6.825284 TCACACACGTATTTAAGTTTTCGA 57.175 33.333 0.00 0.00 0.00 3.71
228 229 7.410800 TCACACACGTATTTAAGTTTTCGAT 57.589 32.000 0.00 0.00 0.00 3.59
229 230 7.503991 TCACACACGTATTTAAGTTTTCGATC 58.496 34.615 0.00 0.00 0.00 3.69
230 231 7.169476 TCACACACGTATTTAAGTTTTCGATCA 59.831 33.333 0.00 0.00 0.00 2.92
231 232 7.794810 CACACACGTATTTAAGTTTTCGATCAA 59.205 33.333 0.00 0.00 0.00 2.57
232 233 8.500773 ACACACGTATTTAAGTTTTCGATCAAT 58.499 29.630 0.00 0.00 0.00 2.57
233 234 9.961266 CACACGTATTTAAGTTTTCGATCAATA 57.039 29.630 0.00 0.00 0.00 1.90
234 235 9.962759 ACACGTATTTAAGTTTTCGATCAATAC 57.037 29.630 0.00 0.00 0.00 1.89
235 236 9.961266 CACGTATTTAAGTTTTCGATCAATACA 57.039 29.630 0.00 0.00 0.00 2.29
244 245 8.492673 AGTTTTCGATCAATACAATTAGAGCA 57.507 30.769 0.00 0.00 0.00 4.26
245 246 9.113838 AGTTTTCGATCAATACAATTAGAGCAT 57.886 29.630 0.00 0.00 0.00 3.79
246 247 9.162793 GTTTTCGATCAATACAATTAGAGCATG 57.837 33.333 0.00 0.00 0.00 4.06
247 248 8.661352 TTTCGATCAATACAATTAGAGCATGA 57.339 30.769 0.00 0.00 0.00 3.07
248 249 8.661352 TTCGATCAATACAATTAGAGCATGAA 57.339 30.769 0.00 0.00 0.00 2.57
249 250 8.837788 TCGATCAATACAATTAGAGCATGAAT 57.162 30.769 0.00 0.00 0.00 2.57
250 251 9.927668 TCGATCAATACAATTAGAGCATGAATA 57.072 29.630 0.00 0.00 0.00 1.75
308 309 6.824958 ACCCACTTTATTATTGCCTCTAGA 57.175 37.500 0.00 0.00 0.00 2.43
309 310 6.831976 ACCCACTTTATTATTGCCTCTAGAG 58.168 40.000 13.18 13.18 0.00 2.43
310 311 5.703130 CCCACTTTATTATTGCCTCTAGAGC 59.297 44.000 14.73 10.34 0.00 4.09
311 312 6.291377 CCACTTTATTATTGCCTCTAGAGCA 58.709 40.000 14.73 12.79 38.81 4.26
312 313 6.939163 CCACTTTATTATTGCCTCTAGAGCAT 59.061 38.462 14.73 8.17 40.59 3.79
313 314 8.097038 CCACTTTATTATTGCCTCTAGAGCATA 58.903 37.037 14.73 7.24 40.59 3.14
314 315 9.664332 CACTTTATTATTGCCTCTAGAGCATAT 57.336 33.333 14.73 12.89 40.59 1.78
318 319 9.672673 TTATTATTGCCTCTAGAGCATATTTCC 57.327 33.333 14.73 0.00 40.59 3.13
319 320 5.573380 ATTGCCTCTAGAGCATATTTCCA 57.427 39.130 14.73 0.46 40.59 3.53
320 321 5.372343 TTGCCTCTAGAGCATATTTCCAA 57.628 39.130 14.73 4.29 40.59 3.53
321 322 4.708177 TGCCTCTAGAGCATATTTCCAAC 58.292 43.478 14.73 0.00 34.69 3.77
322 323 4.164030 TGCCTCTAGAGCATATTTCCAACA 59.836 41.667 14.73 0.00 34.69 3.33
323 324 5.163163 TGCCTCTAGAGCATATTTCCAACAT 60.163 40.000 14.73 0.00 34.69 2.71
324 325 5.767168 GCCTCTAGAGCATATTTCCAACATT 59.233 40.000 14.73 0.00 0.00 2.71
325 326 6.072783 GCCTCTAGAGCATATTTCCAACATTC 60.073 42.308 14.73 0.00 0.00 2.67
326 327 7.222872 CCTCTAGAGCATATTTCCAACATTCT 58.777 38.462 14.73 0.00 0.00 2.40
327 328 7.172875 CCTCTAGAGCATATTTCCAACATTCTG 59.827 40.741 14.73 0.00 0.00 3.02
328 329 7.795047 TCTAGAGCATATTTCCAACATTCTGA 58.205 34.615 0.00 0.00 0.00 3.27
329 330 8.267183 TCTAGAGCATATTTCCAACATTCTGAA 58.733 33.333 0.00 0.00 0.00 3.02
366 367 1.272769 GCAGTTGTTCGAGGACCTACT 59.727 52.381 0.00 0.00 0.00 2.57
439 440 1.073603 TGCACAACATGACCATGGAGA 59.926 47.619 21.47 4.05 42.91 3.71
458 459 4.080638 GGAGAATGAGGGTGAAGATTCTGT 60.081 45.833 0.00 0.00 35.71 3.41
469 470 1.479709 AGATTCTGTCGGAGGTCTGG 58.520 55.000 0.00 0.00 0.00 3.86
471 472 2.035632 GATTCTGTCGGAGGTCTGGAT 58.964 52.381 0.00 0.00 0.00 3.41
484 485 5.243730 GGAGGTCTGGATTTTGAAAACATGA 59.756 40.000 0.00 0.00 0.00 3.07
515 516 8.772250 TCCTATCCAACTTTCACATTAGAATCT 58.228 33.333 0.00 0.00 0.00 2.40
517 518 9.605275 CTATCCAACTTTCACATTAGAATCTGA 57.395 33.333 0.00 0.00 0.00 3.27
582 583 2.749441 GCAACTCCTGGGCAGCTC 60.749 66.667 0.00 0.00 0.00 4.09
606 607 9.993454 CTCAAGGAAGATCTGATTGAACATATA 57.007 33.333 14.78 0.00 30.10 0.86
612 613 7.918536 AGATCTGATTGAACATATATGTGCC 57.081 36.000 18.94 13.82 41.61 5.01
617 618 7.384932 TCTGATTGAACATATATGTGCCGTTAG 59.615 37.037 18.94 13.16 41.61 2.34
621 623 3.244582 ACATATATGTGCCGTTAGGGGA 58.755 45.455 17.60 0.00 40.03 4.81
646 648 9.319143 GAATAACTAGAACATATGTGTGAGCTT 57.681 33.333 9.63 6.65 38.92 3.74
654 656 8.454106 AGAACATATGTGTGAGCTTATTTCAAC 58.546 33.333 9.63 0.00 38.92 3.18
660 662 6.494842 TGTGTGAGCTTATTTCAACTTTGAC 58.505 36.000 0.00 0.00 36.83 3.18
737 739 7.714377 TGCCACATTTTAACATTTTCACTCATT 59.286 29.630 0.00 0.00 0.00 2.57
753 759 8.735692 TTCACTCATTGTAGATTTGATATGCA 57.264 30.769 0.00 0.00 0.00 3.96
771 777 2.165437 TGCAATTATTTCGAGGGTTGCC 59.835 45.455 15.48 0.00 40.73 4.52
772 778 2.794631 GCAATTATTTCGAGGGTTGCCG 60.795 50.000 10.17 0.00 36.78 5.69
785 791 4.340617 AGGGTTGCCGAAATTAGAAATCA 58.659 39.130 0.00 0.00 0.00 2.57
788 794 5.449177 GGGTTGCCGAAATTAGAAATCAGAG 60.449 44.000 0.00 0.00 0.00 3.35
794 800 5.986135 CCGAAATTAGAAATCAGAGACGGAT 59.014 40.000 0.00 0.00 38.09 4.18
800 806 9.667107 AATTAGAAATCAGAGACGGATGTTTAA 57.333 29.630 0.00 0.00 0.00 1.52
805 811 5.477607 TCAGAGACGGATGTTTAAGGAAA 57.522 39.130 0.00 0.00 0.00 3.13
821 827 3.434309 AGGAAAATGGTTGGATGACTGG 58.566 45.455 0.00 0.00 0.00 4.00
822 828 2.094026 GGAAAATGGTTGGATGACTGGC 60.094 50.000 0.00 0.00 0.00 4.85
823 829 2.610438 AAATGGTTGGATGACTGGCT 57.390 45.000 0.00 0.00 0.00 4.75
824 830 2.134789 AATGGTTGGATGACTGGCTC 57.865 50.000 0.00 0.00 0.00 4.70
825 831 1.293062 ATGGTTGGATGACTGGCTCT 58.707 50.000 0.00 0.00 0.00 4.09
826 832 1.951209 TGGTTGGATGACTGGCTCTA 58.049 50.000 0.00 0.00 0.00 2.43
827 833 2.481441 TGGTTGGATGACTGGCTCTAT 58.519 47.619 0.00 0.00 0.00 1.98
829 835 4.234550 TGGTTGGATGACTGGCTCTATAT 58.765 43.478 0.00 0.00 0.00 0.86
830 836 4.660303 TGGTTGGATGACTGGCTCTATATT 59.340 41.667 0.00 0.00 0.00 1.28
832 838 6.328934 TGGTTGGATGACTGGCTCTATATTTA 59.671 38.462 0.00 0.00 0.00 1.40
833 839 7.017551 TGGTTGGATGACTGGCTCTATATTTAT 59.982 37.037 0.00 0.00 0.00 1.40
834 840 8.540388 GGTTGGATGACTGGCTCTATATTTATA 58.460 37.037 0.00 0.00 0.00 0.98
837 843 8.928448 TGGATGACTGGCTCTATATTTATATCC 58.072 37.037 0.00 0.00 0.00 2.59
838 844 8.085296 GGATGACTGGCTCTATATTTATATCCG 58.915 40.741 0.00 0.00 0.00 4.18
839 845 6.806751 TGACTGGCTCTATATTTATATCCGC 58.193 40.000 0.00 0.00 0.00 5.54
840 846 5.833082 ACTGGCTCTATATTTATATCCGCG 58.167 41.667 0.00 0.00 0.00 6.46
855 879 2.004017 TCCGCGGACAAATATTGTGTC 58.996 47.619 27.28 16.22 45.52 3.67
1287 3938 2.424601 TCTGATTCCGTTCGGTTCGTAT 59.575 45.455 11.04 0.00 0.00 3.06
1299 3950 1.061411 TTCGTATCGTCTCGGCGTG 59.939 57.895 6.85 4.24 0.00 5.34
1707 6301 1.822990 GTCTACTCCAACGTGATGGGA 59.177 52.381 6.44 2.77 41.05 4.37
2230 6842 3.329300 CTGGTGAACAGGGTTGAGG 57.671 57.895 0.00 0.00 43.70 3.86
2342 7451 2.674380 CCTGTCCAAGCCACAGCC 60.674 66.667 0.00 0.00 40.10 4.85
2343 7452 2.113774 CTGTCCAAGCCACAGCCA 59.886 61.111 0.00 0.00 41.25 4.75
2344 7453 2.203337 TGTCCAAGCCACAGCCAC 60.203 61.111 0.00 0.00 41.25 5.01
2345 7454 2.203337 GTCCAAGCCACAGCCACA 60.203 61.111 0.00 0.00 41.25 4.17
2346 7455 2.113774 TCCAAGCCACAGCCACAG 59.886 61.111 0.00 0.00 41.25 3.66
2347 7456 3.677648 CCAAGCCACAGCCACAGC 61.678 66.667 0.00 0.00 41.25 4.40
2370 7488 4.974721 CAGCCCCAGGTGCCGTTT 62.975 66.667 0.00 0.00 34.14 3.60
2374 7492 2.113139 CCCAGGTGCCGTTTGACT 59.887 61.111 0.00 0.00 0.00 3.41
2379 7497 0.390124 AGGTGCCGTTTGACTTACGA 59.610 50.000 0.00 0.00 41.33 3.43
2633 7754 2.498726 GCCTGAGAGGAAGAGGCG 59.501 66.667 0.00 0.00 42.84 5.52
2634 7755 3.087666 GCCTGAGAGGAAGAGGCGG 62.088 68.421 0.00 0.00 42.84 6.13
2670 7791 1.821061 ATATCCTCCCCAGCGCTTCG 61.821 60.000 7.50 0.00 0.00 3.79
2684 7805 2.357760 TTCGGTACAGGGCGTTGC 60.358 61.111 0.00 0.00 0.00 4.17
2729 7886 5.130145 AGAGCAATCACAGGAACTAGCTAAT 59.870 40.000 0.00 0.00 36.02 1.73
2767 7954 1.301677 CCAAGGCAAGCCGAAGTCTC 61.302 60.000 5.28 0.00 41.95 3.36
2805 8001 1.477558 GGGAGACGGCATGATCCAATT 60.478 52.381 0.00 0.00 33.24 2.32
2916 8288 9.433153 ACAATTGTGTATGATAGCTGATGATAG 57.567 33.333 11.07 0.00 35.72 2.08
2917 8289 9.649167 CAATTGTGTATGATAGCTGATGATAGA 57.351 33.333 0.00 0.00 0.00 1.98
2921 8293 9.466497 TGTGTATGATAGCTGATGATAGATACA 57.534 33.333 0.00 0.00 0.00 2.29
2963 8367 8.758829 AGTTGTGTATGGACTATCAAGTTATCA 58.241 33.333 0.00 0.00 35.56 2.15
2994 8398 3.549997 CAAACTGTTGGAAGCACCG 57.450 52.632 0.00 0.00 42.61 4.94
2997 8401 1.724582 AACTGTTGGAAGCACCGCAC 61.725 55.000 0.00 0.00 42.61 5.34
3067 8476 3.653256 CTGCAAGTCTTCGATGTGATG 57.347 47.619 0.00 0.00 0.00 3.07
3068 8477 2.998670 CTGCAAGTCTTCGATGTGATGT 59.001 45.455 0.00 0.00 0.00 3.06
3069 8478 3.402110 TGCAAGTCTTCGATGTGATGTT 58.598 40.909 0.00 0.00 0.00 2.71
3070 8479 3.187022 TGCAAGTCTTCGATGTGATGTTG 59.813 43.478 0.00 2.53 0.00 3.33
3106 8515 3.002348 GCCATGGTTTCGCTCTTATGTAC 59.998 47.826 14.67 0.00 0.00 2.90
3107 8516 4.442706 CCATGGTTTCGCTCTTATGTACT 58.557 43.478 2.57 0.00 0.00 2.73
3108 8517 4.508124 CCATGGTTTCGCTCTTATGTACTC 59.492 45.833 2.57 0.00 0.00 2.59
3109 8518 4.119442 TGGTTTCGCTCTTATGTACTCC 57.881 45.455 0.00 0.00 0.00 3.85
3110 8519 3.118884 TGGTTTCGCTCTTATGTACTCCC 60.119 47.826 0.00 0.00 0.00 4.30
3112 8521 4.361420 GTTTCGCTCTTATGTACTCCCTC 58.639 47.826 0.00 0.00 0.00 4.30
3113 8522 2.584236 TCGCTCTTATGTACTCCCTCC 58.416 52.381 0.00 0.00 0.00 4.30
3114 8523 1.267261 CGCTCTTATGTACTCCCTCCG 59.733 57.143 0.00 0.00 0.00 4.63
3115 8524 2.308690 GCTCTTATGTACTCCCTCCGT 58.691 52.381 0.00 0.00 0.00 4.69
3116 8525 3.484407 GCTCTTATGTACTCCCTCCGTA 58.516 50.000 0.00 0.00 0.00 4.02
3117 8526 3.252944 GCTCTTATGTACTCCCTCCGTAC 59.747 52.174 0.00 0.00 38.13 3.67
3118 8527 4.716794 CTCTTATGTACTCCCTCCGTACT 58.283 47.826 0.00 0.00 38.39 2.73
3119 8528 5.744300 GCTCTTATGTACTCCCTCCGTACTA 60.744 48.000 0.00 0.00 38.39 1.82
3120 8529 6.252599 TCTTATGTACTCCCTCCGTACTAA 57.747 41.667 0.00 0.00 38.39 2.24
3121 8530 6.662755 TCTTATGTACTCCCTCCGTACTAAA 58.337 40.000 0.00 0.00 38.39 1.85
3122 8531 7.118723 TCTTATGTACTCCCTCCGTACTAAAA 58.881 38.462 0.00 0.00 38.39 1.52
3123 8532 7.781693 TCTTATGTACTCCCTCCGTACTAAAAT 59.218 37.037 0.00 0.00 38.39 1.82
3124 8533 8.995027 TTATGTACTCCCTCCGTACTAAAATA 57.005 34.615 0.00 0.00 38.39 1.40
3125 8534 9.592196 TTATGTACTCCCTCCGTACTAAAATAT 57.408 33.333 0.00 0.00 38.39 1.28
3127 8536 8.995027 TGTACTCCCTCCGTACTAAAATATAA 57.005 34.615 0.00 0.00 38.39 0.98
3128 8537 8.850156 TGTACTCCCTCCGTACTAAAATATAAC 58.150 37.037 0.00 0.00 38.39 1.89
3129 8538 6.974965 ACTCCCTCCGTACTAAAATATAACG 58.025 40.000 0.00 0.00 0.00 3.18
3130 8539 6.547510 ACTCCCTCCGTACTAAAATATAACGT 59.452 38.462 0.00 0.00 31.87 3.99
3131 8540 7.068716 ACTCCCTCCGTACTAAAATATAACGTT 59.931 37.037 5.88 5.88 31.87 3.99
3132 8541 7.781056 TCCCTCCGTACTAAAATATAACGTTT 58.219 34.615 5.91 0.00 31.87 3.60
3133 8542 8.908903 TCCCTCCGTACTAAAATATAACGTTTA 58.091 33.333 5.91 0.00 31.87 2.01
3134 8543 9.528018 CCCTCCGTACTAAAATATAACGTTTAA 57.472 33.333 5.91 0.00 31.87 1.52
3161 8570 7.905604 TGAACTGTATATTTTGACACTGAGG 57.094 36.000 0.00 0.00 0.00 3.86
3162 8571 7.450074 TGAACTGTATATTTTGACACTGAGGT 58.550 34.615 0.00 0.00 0.00 3.85
3163 8572 8.590204 TGAACTGTATATTTTGACACTGAGGTA 58.410 33.333 0.00 0.00 0.00 3.08
3164 8573 9.088512 GAACTGTATATTTTGACACTGAGGTAG 57.911 37.037 0.00 0.00 0.00 3.18
3165 8574 8.135382 ACTGTATATTTTGACACTGAGGTAGT 57.865 34.615 0.00 0.00 41.36 2.73
3166 8575 9.251440 ACTGTATATTTTGACACTGAGGTAGTA 57.749 33.333 0.00 0.00 37.60 1.82
3167 8576 9.517609 CTGTATATTTTGACACTGAGGTAGTAC 57.482 37.037 0.00 0.00 37.60 2.73
3168 8577 9.251440 TGTATATTTTGACACTGAGGTAGTACT 57.749 33.333 0.00 0.00 37.60 2.73
3171 8580 5.464030 TTTGACACTGAGGTAGTACTTCC 57.536 43.478 10.44 10.44 37.60 3.46
3172 8581 4.383931 TGACACTGAGGTAGTACTTCCT 57.616 45.455 20.06 20.06 37.60 3.36
3174 8583 3.695556 GACACTGAGGTAGTACTTCCTCC 59.304 52.174 33.46 20.22 46.76 4.30
3175 8584 2.683867 CACTGAGGTAGTACTTCCTCCG 59.316 54.545 33.46 30.37 46.76 4.63
3176 8585 2.308275 ACTGAGGTAGTACTTCCTCCGT 59.692 50.000 33.46 30.89 46.76 4.69
3177 8586 3.245193 ACTGAGGTAGTACTTCCTCCGTT 60.245 47.826 33.46 20.61 46.76 4.44
3178 8587 3.350833 TGAGGTAGTACTTCCTCCGTTC 58.649 50.000 33.46 17.83 46.76 3.95
3179 8588 2.687425 GAGGTAGTACTTCCTCCGTTCC 59.313 54.545 29.28 11.01 42.96 3.62
3180 8589 1.753649 GGTAGTACTTCCTCCGTTCCC 59.246 57.143 11.11 0.00 0.00 3.97
3181 8590 2.450476 GTAGTACTTCCTCCGTTCCCA 58.550 52.381 0.00 0.00 0.00 4.37
3182 8591 2.019807 AGTACTTCCTCCGTTCCCAA 57.980 50.000 0.00 0.00 0.00 4.12
3183 8592 2.332117 AGTACTTCCTCCGTTCCCAAA 58.668 47.619 0.00 0.00 0.00 3.28
3184 8593 2.910977 AGTACTTCCTCCGTTCCCAAAT 59.089 45.455 0.00 0.00 0.00 2.32
3185 8594 2.200373 ACTTCCTCCGTTCCCAAATG 57.800 50.000 0.00 0.00 0.00 2.32
3186 8595 1.423921 ACTTCCTCCGTTCCCAAATGT 59.576 47.619 0.00 0.00 0.00 2.71
3187 8596 2.640826 ACTTCCTCCGTTCCCAAATGTA 59.359 45.455 0.00 0.00 0.00 2.29
3188 8597 3.073356 ACTTCCTCCGTTCCCAAATGTAA 59.927 43.478 0.00 0.00 0.00 2.41
3189 8598 3.343941 TCCTCCGTTCCCAAATGTAAG 57.656 47.619 0.00 0.00 0.00 2.34
3190 8599 2.640826 TCCTCCGTTCCCAAATGTAAGT 59.359 45.455 0.00 0.00 0.00 2.24
3191 8600 3.007635 CCTCCGTTCCCAAATGTAAGTC 58.992 50.000 0.00 0.00 0.00 3.01
3192 8601 3.307480 CCTCCGTTCCCAAATGTAAGTCT 60.307 47.826 0.00 0.00 0.00 3.24
3193 8602 4.324267 CTCCGTTCCCAAATGTAAGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
3194 8603 4.721132 TCCGTTCCCAAATGTAAGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
3195 8604 4.517453 TCCGTTCCCAAATGTAAGTCTTTG 59.483 41.667 0.00 0.00 33.20 2.77
3196 8605 4.277423 CCGTTCCCAAATGTAAGTCTTTGT 59.723 41.667 0.00 0.00 31.83 2.83
3197 8606 5.470777 CCGTTCCCAAATGTAAGTCTTTGTA 59.529 40.000 0.00 0.00 31.83 2.41
3198 8607 6.348213 CCGTTCCCAAATGTAAGTCTTTGTAG 60.348 42.308 0.00 0.00 31.83 2.74
3199 8608 6.425721 CGTTCCCAAATGTAAGTCTTTGTAGA 59.574 38.462 0.00 0.00 31.83 2.59
3200 8609 7.360101 CGTTCCCAAATGTAAGTCTTTGTAGAG 60.360 40.741 0.00 0.00 31.83 2.43
3201 8610 7.311092 TCCCAAATGTAAGTCTTTGTAGAGA 57.689 36.000 0.00 0.00 31.83 3.10
3202 8611 7.918076 TCCCAAATGTAAGTCTTTGTAGAGAT 58.082 34.615 0.00 0.00 31.83 2.75
3203 8612 8.383175 TCCCAAATGTAAGTCTTTGTAGAGATT 58.617 33.333 0.00 0.00 31.83 2.40
3204 8613 9.014297 CCCAAATGTAAGTCTTTGTAGAGATTT 57.986 33.333 0.00 0.00 31.83 2.17
3210 8619 9.219603 TGTAAGTCTTTGTAGAGATTTCATTGG 57.780 33.333 0.00 0.00 29.76 3.16
3211 8620 9.436957 GTAAGTCTTTGTAGAGATTTCATTGGA 57.563 33.333 0.00 0.00 29.76 3.53
3213 8622 8.503458 AGTCTTTGTAGAGATTTCATTGGATG 57.497 34.615 0.00 0.00 0.00 3.51
3214 8623 7.555554 AGTCTTTGTAGAGATTTCATTGGATGG 59.444 37.037 0.00 0.00 0.00 3.51
3215 8624 7.554118 GTCTTTGTAGAGATTTCATTGGATGGA 59.446 37.037 0.00 0.00 0.00 3.41
3216 8625 7.554118 TCTTTGTAGAGATTTCATTGGATGGAC 59.446 37.037 0.00 0.00 0.00 4.02
3217 8626 6.566079 TGTAGAGATTTCATTGGATGGACT 57.434 37.500 0.00 0.00 0.00 3.85
3218 8627 7.675161 TGTAGAGATTTCATTGGATGGACTA 57.325 36.000 0.00 0.00 0.00 2.59
3219 8628 7.500992 TGTAGAGATTTCATTGGATGGACTAC 58.499 38.462 0.00 0.00 0.00 2.73
3220 8629 6.566079 AGAGATTTCATTGGATGGACTACA 57.434 37.500 0.00 0.00 0.00 2.74
3221 8630 7.146715 AGAGATTTCATTGGATGGACTACAT 57.853 36.000 0.00 0.00 44.18 2.29
3222 8631 8.267620 AGAGATTTCATTGGATGGACTACATA 57.732 34.615 0.00 0.00 40.72 2.29
3223 8632 8.153550 AGAGATTTCATTGGATGGACTACATAC 58.846 37.037 0.00 0.00 40.72 2.39
3224 8633 6.931281 AGATTTCATTGGATGGACTACATACG 59.069 38.462 0.00 0.00 43.86 3.06
3225 8634 4.600692 TCATTGGATGGACTACATACGG 57.399 45.455 0.00 0.00 43.86 4.02
3226 8635 4.219919 TCATTGGATGGACTACATACGGA 58.780 43.478 0.00 0.00 43.86 4.69
3227 8636 4.280929 TCATTGGATGGACTACATACGGAG 59.719 45.833 0.00 0.00 43.86 4.63
3228 8637 1.961394 TGGATGGACTACATACGGAGC 59.039 52.381 0.00 0.00 43.86 4.70
3229 8638 1.961394 GGATGGACTACATACGGAGCA 59.039 52.381 0.00 0.00 40.72 4.26
3230 8639 2.364324 GGATGGACTACATACGGAGCAA 59.636 50.000 0.00 0.00 40.72 3.91
3231 8640 3.181469 GGATGGACTACATACGGAGCAAA 60.181 47.826 0.00 0.00 40.72 3.68
3232 8641 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
3233 8642 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
3234 8643 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
3235 8644 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
3236 8645 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
3237 8646 5.527582 GGACTACATACGGAGCAAAATGAAT 59.472 40.000 0.00 0.00 0.00 2.57
3238 8647 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
3239 8648 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
3240 8649 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
3241 8650 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
3242 8651 6.866480 ACATACGGAGCAAAATGAATGAATT 58.134 32.000 0.00 0.00 0.00 2.17
3243 8652 6.974622 ACATACGGAGCAAAATGAATGAATTC 59.025 34.615 0.00 0.00 37.31 2.17
3259 8668 9.142515 TGAATGAATTCACACTTAAAATGCATC 57.857 29.630 11.07 0.00 41.51 3.91
3260 8669 9.362539 GAATGAATTCACACTTAAAATGCATCT 57.637 29.630 11.07 0.00 36.80 2.90
3272 8681 9.944376 ACTTAAAATGCATCTATATACATCCGT 57.056 29.630 0.00 0.00 0.00 4.69
3279 8688 9.800572 ATGCATCTATATACATCCGTATCTAGT 57.199 33.333 0.00 0.00 39.17 2.57
3280 8689 9.628500 TGCATCTATATACATCCGTATCTAGTT 57.372 33.333 0.00 0.00 39.17 2.24
3288 8697 6.576662 ACATCCGTATCTAGTTCATAGTGG 57.423 41.667 0.00 0.00 32.85 4.00
3289 8698 6.304624 ACATCCGTATCTAGTTCATAGTGGA 58.695 40.000 0.00 0.00 32.85 4.02
3290 8699 6.776116 ACATCCGTATCTAGTTCATAGTGGAA 59.224 38.462 0.00 0.00 32.85 3.53
3291 8700 7.451877 ACATCCGTATCTAGTTCATAGTGGAAT 59.548 37.037 0.00 0.00 32.85 3.01
3292 8701 7.450124 TCCGTATCTAGTTCATAGTGGAATC 57.550 40.000 0.00 0.00 32.85 2.52
3293 8702 7.232188 TCCGTATCTAGTTCATAGTGGAATCT 58.768 38.462 0.00 0.00 32.85 2.40
3294 8703 7.390996 TCCGTATCTAGTTCATAGTGGAATCTC 59.609 40.741 0.00 0.00 32.85 2.75
3295 8704 7.392113 CCGTATCTAGTTCATAGTGGAATCTCT 59.608 40.741 0.00 0.00 32.85 3.10
3296 8705 9.438228 CGTATCTAGTTCATAGTGGAATCTCTA 57.562 37.037 0.00 0.00 32.85 2.43
3299 8708 9.647918 ATCTAGTTCATAGTGGAATCTCTACAA 57.352 33.333 0.00 0.00 29.47 2.41
3300 8709 9.475620 TCTAGTTCATAGTGGAATCTCTACAAA 57.524 33.333 0.00 0.00 29.47 2.83
3301 8710 9.743057 CTAGTTCATAGTGGAATCTCTACAAAG 57.257 37.037 0.00 0.00 29.47 2.77
3302 8711 8.367660 AGTTCATAGTGGAATCTCTACAAAGA 57.632 34.615 0.00 0.00 29.47 2.52
3303 8712 8.254508 AGTTCATAGTGGAATCTCTACAAAGAC 58.745 37.037 0.00 0.00 29.47 3.01
3304 8713 7.962995 TCATAGTGGAATCTCTACAAAGACT 57.037 36.000 0.00 0.00 29.47 3.24
3305 8714 8.367660 TCATAGTGGAATCTCTACAAAGACTT 57.632 34.615 0.00 0.00 29.47 3.01
3306 8715 9.475620 TCATAGTGGAATCTCTACAAAGACTTA 57.524 33.333 0.00 0.00 29.47 2.24
3321 8730 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
3322 8731 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
3323 8732 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
3324 8733 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
3325 8734 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
3326 8735 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
3327 8736 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
3403 9008 5.358725 TCTGAGCATGCATTGTGATATGTTT 59.641 36.000 21.98 0.00 0.00 2.83
3406 9011 5.345702 AGCATGCATTGTGATATGTTTGAC 58.654 37.500 21.98 0.00 0.00 3.18
3428 9033 6.070653 TGACCAAATATACAAGGTTCGGTAGT 60.071 38.462 0.00 0.00 33.77 2.73
3438 9043 4.694760 AGGTTCGGTAGTTTTTGGTACT 57.305 40.909 0.00 0.00 0.00 2.73
3439 9044 4.635223 AGGTTCGGTAGTTTTTGGTACTC 58.365 43.478 0.00 0.00 0.00 2.59
3451 9059 0.472352 TGGTACTCGGGTGGGAGTTT 60.472 55.000 0.00 0.00 44.65 2.66
3470 9353 6.640092 GGAGTTTTATCCTACGTATTCTTCCG 59.360 42.308 0.00 0.00 36.35 4.30
3536 9420 7.118723 TCAAGGTGCAAAGATCAACCTATTAT 58.881 34.615 0.00 0.00 0.00 1.28
3539 9423 6.064717 GGTGCAAAGATCAACCTATTATCCT 58.935 40.000 0.00 0.00 0.00 3.24
3545 9429 5.788450 AGATCAACCTATTATCCTCGCAAG 58.212 41.667 0.00 0.00 0.00 4.01
3578 9462 9.840427 AAGATCAACCTATTAAAAATGTGAACG 57.160 29.630 0.00 0.00 0.00 3.95
3585 9469 8.736244 ACCTATTAAAAATGTGAACGTAGCAAT 58.264 29.630 0.00 0.00 0.00 3.56
3597 9481 6.477033 GTGAACGTAGCAATCTATCAACAGAT 59.523 38.462 0.00 0.00 36.83 2.90
3640 9558 2.638363 GTCCACTAGTCCCTCCTTGTTT 59.362 50.000 0.00 0.00 0.00 2.83
3658 9576 5.132897 TGTTTTTCTTGTGTCTGCAACTT 57.867 34.783 0.00 0.00 0.00 2.66
3659 9577 6.260870 TGTTTTTCTTGTGTCTGCAACTTA 57.739 33.333 0.00 0.00 0.00 2.24
3660 9578 6.862209 TGTTTTTCTTGTGTCTGCAACTTAT 58.138 32.000 0.00 0.00 0.00 1.73
3661 9579 6.972328 TGTTTTTCTTGTGTCTGCAACTTATC 59.028 34.615 0.00 0.00 0.00 1.75
3662 9580 6.942532 TTTTCTTGTGTCTGCAACTTATCT 57.057 33.333 0.00 0.00 0.00 1.98
3663 9581 8.342634 GTTTTTCTTGTGTCTGCAACTTATCTA 58.657 33.333 0.00 0.00 0.00 1.98
3664 9582 7.658179 TTTCTTGTGTCTGCAACTTATCTAG 57.342 36.000 0.00 0.00 0.00 2.43
3665 9583 6.346477 TCTTGTGTCTGCAACTTATCTAGT 57.654 37.500 0.00 0.00 39.32 2.57
3666 9584 7.462571 TCTTGTGTCTGCAACTTATCTAGTA 57.537 36.000 0.00 0.00 35.54 1.82
3667 9585 7.892609 TCTTGTGTCTGCAACTTATCTAGTAA 58.107 34.615 0.00 0.00 35.54 2.24
3668 9586 7.813148 TCTTGTGTCTGCAACTTATCTAGTAAC 59.187 37.037 0.00 0.00 35.54 2.50
3669 9587 6.988522 TGTGTCTGCAACTTATCTAGTAACA 58.011 36.000 0.00 0.00 35.54 2.41
3670 9588 7.611770 TGTGTCTGCAACTTATCTAGTAACAT 58.388 34.615 0.00 0.00 35.54 2.71
3671 9589 7.759886 TGTGTCTGCAACTTATCTAGTAACATC 59.240 37.037 0.00 0.00 35.54 3.06
3672 9590 7.222999 GTGTCTGCAACTTATCTAGTAACATCC 59.777 40.741 0.00 0.00 35.54 3.51
3673 9591 7.124298 TGTCTGCAACTTATCTAGTAACATCCT 59.876 37.037 0.00 0.00 35.54 3.24
3674 9592 7.982354 GTCTGCAACTTATCTAGTAACATCCTT 59.018 37.037 0.00 0.00 35.54 3.36
3675 9593 7.981789 TCTGCAACTTATCTAGTAACATCCTTG 59.018 37.037 0.00 0.00 35.54 3.61
3676 9594 7.620880 TGCAACTTATCTAGTAACATCCTTGT 58.379 34.615 0.00 0.00 35.54 3.16
3678 9596 8.604890 GCAACTTATCTAGTAACATCCTTGTTC 58.395 37.037 0.00 0.00 44.85 3.18
3679 9597 9.099454 CAACTTATCTAGTAACATCCTTGTTCC 57.901 37.037 0.00 0.00 44.85 3.62
3680 9598 7.793036 ACTTATCTAGTAACATCCTTGTTCCC 58.207 38.462 0.00 0.00 42.43 3.97
3681 9599 5.632034 ATCTAGTAACATCCTTGTTCCCC 57.368 43.478 0.00 0.00 42.43 4.81
3682 9600 3.778629 TCTAGTAACATCCTTGTTCCCCC 59.221 47.826 0.00 0.00 42.43 5.40
3683 9601 1.280998 AGTAACATCCTTGTTCCCCCG 59.719 52.381 0.00 0.00 42.43 5.73
3684 9602 1.279846 GTAACATCCTTGTTCCCCCGA 59.720 52.381 0.00 0.00 42.43 5.14
3685 9603 0.774908 AACATCCTTGTTCCCCCGAA 59.225 50.000 0.00 0.00 42.43 4.30
3686 9604 0.328258 ACATCCTTGTTCCCCCGAAG 59.672 55.000 0.00 0.00 29.55 3.79
3687 9605 3.075758 ACATCCTTGTTCCCCCGAAGG 62.076 57.143 0.00 0.00 39.91 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 9.884465 GCTTAGCATCAGATCGTTTAATTTATT 57.116 29.630 0.00 0.00 0.00 1.40
23 24 9.277783 AGCTTAGCATCAGATCGTTTAATTTAT 57.722 29.630 7.07 0.00 0.00 1.40
24 25 8.662781 AGCTTAGCATCAGATCGTTTAATTTA 57.337 30.769 7.07 0.00 0.00 1.40
25 26 7.559590 AGCTTAGCATCAGATCGTTTAATTT 57.440 32.000 7.07 0.00 0.00 1.82
26 27 7.559590 AAGCTTAGCATCAGATCGTTTAATT 57.440 32.000 7.07 0.00 0.00 1.40
27 28 7.096023 CGTAAGCTTAGCATCAGATCGTTTAAT 60.096 37.037 6.38 0.00 0.00 1.40
28 29 6.198403 CGTAAGCTTAGCATCAGATCGTTTAA 59.802 38.462 6.38 0.00 0.00 1.52
29 30 5.685954 CGTAAGCTTAGCATCAGATCGTTTA 59.314 40.000 6.38 0.00 0.00 2.01
30 31 4.504461 CGTAAGCTTAGCATCAGATCGTTT 59.496 41.667 6.38 0.00 0.00 3.60
31 32 4.045104 CGTAAGCTTAGCATCAGATCGTT 58.955 43.478 6.38 0.00 0.00 3.85
32 33 3.551046 CCGTAAGCTTAGCATCAGATCGT 60.551 47.826 6.38 0.00 0.00 3.73
33 34 2.983136 CCGTAAGCTTAGCATCAGATCG 59.017 50.000 6.38 3.48 0.00 3.69
34 35 3.983741 ACCGTAAGCTTAGCATCAGATC 58.016 45.455 6.38 0.00 0.00 2.75
35 36 4.122776 CAACCGTAAGCTTAGCATCAGAT 58.877 43.478 6.38 0.00 0.00 2.90
36 37 3.521560 CAACCGTAAGCTTAGCATCAGA 58.478 45.455 6.38 0.00 0.00 3.27
37 38 2.609459 CCAACCGTAAGCTTAGCATCAG 59.391 50.000 6.38 0.00 0.00 2.90
38 39 2.627945 CCAACCGTAAGCTTAGCATCA 58.372 47.619 6.38 0.00 0.00 3.07
39 40 1.940613 CCCAACCGTAAGCTTAGCATC 59.059 52.381 6.38 0.00 0.00 3.91
40 41 1.280998 ACCCAACCGTAAGCTTAGCAT 59.719 47.619 6.38 0.00 0.00 3.79
41 42 0.688487 ACCCAACCGTAAGCTTAGCA 59.312 50.000 6.38 0.00 0.00 3.49
42 43 1.066358 AGACCCAACCGTAAGCTTAGC 60.066 52.381 6.38 0.00 0.00 3.09
43 44 3.446516 ACTAGACCCAACCGTAAGCTTAG 59.553 47.826 6.38 0.00 0.00 2.18
44 45 3.434309 ACTAGACCCAACCGTAAGCTTA 58.566 45.455 0.86 0.86 0.00 3.09
45 46 2.233186 GACTAGACCCAACCGTAAGCTT 59.767 50.000 3.48 3.48 0.00 3.74
46 47 1.823610 GACTAGACCCAACCGTAAGCT 59.176 52.381 0.00 0.00 0.00 3.74
47 48 1.134877 GGACTAGACCCAACCGTAAGC 60.135 57.143 0.00 0.00 0.00 3.09
48 49 2.173519 TGGACTAGACCCAACCGTAAG 58.826 52.381 8.83 0.00 0.00 2.34
49 50 2.307496 TGGACTAGACCCAACCGTAA 57.693 50.000 8.83 0.00 0.00 3.18
50 51 2.291735 TGATGGACTAGACCCAACCGTA 60.292 50.000 8.83 0.00 37.22 4.02
51 52 1.192428 GATGGACTAGACCCAACCGT 58.808 55.000 8.83 0.00 37.22 4.83
52 53 1.134788 GTGATGGACTAGACCCAACCG 60.135 57.143 8.83 0.00 37.22 4.44
53 54 1.906574 TGTGATGGACTAGACCCAACC 59.093 52.381 8.83 6.73 37.22 3.77
54 55 3.197766 TGATGTGATGGACTAGACCCAAC 59.802 47.826 8.83 8.61 37.22 3.77
55 56 3.449918 TGATGTGATGGACTAGACCCAA 58.550 45.455 8.83 0.00 37.22 4.12
56 57 3.114643 TGATGTGATGGACTAGACCCA 57.885 47.619 8.83 9.60 38.19 4.51
57 58 4.346418 AGAATGATGTGATGGACTAGACCC 59.654 45.833 8.83 4.06 0.00 4.46
58 59 5.543507 AGAATGATGTGATGGACTAGACC 57.456 43.478 4.09 4.09 0.00 3.85
59 60 7.283625 AGTAGAATGATGTGATGGACTAGAC 57.716 40.000 0.00 0.00 0.00 2.59
60 61 8.996651 TTAGTAGAATGATGTGATGGACTAGA 57.003 34.615 0.00 0.00 0.00 2.43
61 62 9.636879 CATTAGTAGAATGATGTGATGGACTAG 57.363 37.037 0.00 0.00 0.00 2.57
62 63 9.367160 TCATTAGTAGAATGATGTGATGGACTA 57.633 33.333 0.00 0.00 32.21 2.59
63 64 8.255111 TCATTAGTAGAATGATGTGATGGACT 57.745 34.615 0.00 0.00 32.21 3.85
73 74 7.038729 ACGGGATCACATCATTAGTAGAATGAT 60.039 37.037 6.90 6.90 45.40 2.45
74 75 6.267699 ACGGGATCACATCATTAGTAGAATGA 59.732 38.462 0.00 2.66 40.50 2.57
75 76 6.459066 ACGGGATCACATCATTAGTAGAATG 58.541 40.000 0.00 0.00 0.00 2.67
76 77 6.672266 ACGGGATCACATCATTAGTAGAAT 57.328 37.500 0.00 0.00 0.00 2.40
77 78 6.479972 AACGGGATCACATCATTAGTAGAA 57.520 37.500 0.00 0.00 0.00 2.10
78 79 7.450323 TGATAACGGGATCACATCATTAGTAGA 59.550 37.037 0.00 0.00 30.75 2.59
79 80 7.602753 TGATAACGGGATCACATCATTAGTAG 58.397 38.462 0.00 0.00 30.75 2.57
80 81 7.533289 TGATAACGGGATCACATCATTAGTA 57.467 36.000 0.00 0.00 30.75 1.82
81 82 6.419484 TGATAACGGGATCACATCATTAGT 57.581 37.500 0.00 0.00 30.75 2.24
82 83 7.728847 TTTGATAACGGGATCACATCATTAG 57.271 36.000 0.00 0.00 35.56 1.73
83 84 7.936301 TCATTTGATAACGGGATCACATCATTA 59.064 33.333 0.00 0.00 35.56 1.90
84 85 6.772233 TCATTTGATAACGGGATCACATCATT 59.228 34.615 0.00 0.00 35.56 2.57
85 86 6.298361 TCATTTGATAACGGGATCACATCAT 58.702 36.000 0.00 0.00 35.56 2.45
86 87 5.679601 TCATTTGATAACGGGATCACATCA 58.320 37.500 0.00 0.00 35.56 3.07
87 88 6.808008 ATCATTTGATAACGGGATCACATC 57.192 37.500 0.00 0.00 35.56 3.06
101 102 9.857656 AACCATAGACATGAGTTATCATTTGAT 57.142 29.630 0.00 0.00 43.92 2.57
104 105 9.784531 CCTAACCATAGACATGAGTTATCATTT 57.215 33.333 0.00 0.00 43.92 2.32
105 106 9.159254 TCCTAACCATAGACATGAGTTATCATT 57.841 33.333 0.00 0.00 43.92 2.57
107 108 8.547481 TTCCTAACCATAGACATGAGTTATCA 57.453 34.615 0.00 0.00 40.50 2.15
108 109 9.262358 GTTTCCTAACCATAGACATGAGTTATC 57.738 37.037 0.00 0.00 32.34 1.75
129 130 9.503427 CGTTGATTAAAGATGATTAAGGTTTCC 57.497 33.333 0.00 0.00 0.00 3.13
132 133 9.449719 ACTCGTTGATTAAAGATGATTAAGGTT 57.550 29.630 0.00 0.00 0.00 3.50
133 134 9.449719 AACTCGTTGATTAAAGATGATTAAGGT 57.550 29.630 0.00 0.00 0.00 3.50
138 139 9.877178 AGACTAACTCGTTGATTAAAGATGATT 57.123 29.630 0.00 0.00 0.00 2.57
141 142 9.790389 ACTAGACTAACTCGTTGATTAAAGATG 57.210 33.333 0.00 0.00 0.00 2.90
146 147 8.598924 CGTCTACTAGACTAACTCGTTGATTAA 58.401 37.037 13.28 0.00 42.92 1.40
147 148 7.254252 GCGTCTACTAGACTAACTCGTTGATTA 60.254 40.741 13.28 0.00 42.92 1.75
148 149 6.456718 GCGTCTACTAGACTAACTCGTTGATT 60.457 42.308 13.28 0.00 42.92 2.57
149 150 5.006552 GCGTCTACTAGACTAACTCGTTGAT 59.993 44.000 13.28 0.00 42.92 2.57
150 151 4.328440 GCGTCTACTAGACTAACTCGTTGA 59.672 45.833 13.28 0.00 42.92 3.18
151 152 4.329528 AGCGTCTACTAGACTAACTCGTTG 59.670 45.833 13.28 0.00 42.92 4.10
152 153 4.502962 AGCGTCTACTAGACTAACTCGTT 58.497 43.478 13.28 0.00 42.92 3.85
153 154 4.122143 AGCGTCTACTAGACTAACTCGT 57.878 45.455 13.28 0.00 42.92 4.18
154 155 5.748152 AGTAAGCGTCTACTAGACTAACTCG 59.252 44.000 13.28 1.82 42.92 4.18
163 164 4.959723 AGTCCCTAGTAAGCGTCTACTAG 58.040 47.826 18.71 18.71 45.92 2.57
164 165 5.104776 TCAAGTCCCTAGTAAGCGTCTACTA 60.105 44.000 5.88 5.88 34.03 1.82
165 166 3.929955 AGTCCCTAGTAAGCGTCTACT 57.070 47.619 4.35 4.35 36.16 2.57
166 167 3.944015 TCAAGTCCCTAGTAAGCGTCTAC 59.056 47.826 0.00 0.00 0.00 2.59
167 168 4.226427 TCAAGTCCCTAGTAAGCGTCTA 57.774 45.455 0.00 0.00 0.00 2.59
168 169 3.083122 TCAAGTCCCTAGTAAGCGTCT 57.917 47.619 0.00 0.00 0.00 4.18
169 170 5.708877 ATATCAAGTCCCTAGTAAGCGTC 57.291 43.478 0.00 0.00 0.00 5.19
170 171 6.127140 ACAAATATCAAGTCCCTAGTAAGCGT 60.127 38.462 0.00 0.00 0.00 5.07
171 172 6.281405 ACAAATATCAAGTCCCTAGTAAGCG 58.719 40.000 0.00 0.00 0.00 4.68
172 173 8.507524 AAACAAATATCAAGTCCCTAGTAAGC 57.492 34.615 0.00 0.00 0.00 3.09
186 187 9.980780 CGTGTGTGAATACATAAACAAATATCA 57.019 29.630 0.00 0.00 39.39 2.15
187 188 9.982291 ACGTGTGTGAATACATAAACAAATATC 57.018 29.630 0.00 0.00 39.39 1.63
199 200 9.866936 GAAAACTTAAATACGTGTGTGAATACA 57.133 29.630 0.00 0.00 0.00 2.29
200 201 9.033262 CGAAAACTTAAATACGTGTGTGAATAC 57.967 33.333 0.00 0.00 0.00 1.89
201 202 8.976471 TCGAAAACTTAAATACGTGTGTGAATA 58.024 29.630 0.00 0.00 0.00 1.75
202 203 7.853524 TCGAAAACTTAAATACGTGTGTGAAT 58.146 30.769 0.00 0.00 0.00 2.57
203 204 7.231705 TCGAAAACTTAAATACGTGTGTGAA 57.768 32.000 0.00 0.00 0.00 3.18
204 205 6.825284 TCGAAAACTTAAATACGTGTGTGA 57.175 33.333 0.00 0.00 0.00 3.58
205 206 7.285069 TGATCGAAAACTTAAATACGTGTGTG 58.715 34.615 0.00 0.00 0.00 3.82
206 207 7.410800 TGATCGAAAACTTAAATACGTGTGT 57.589 32.000 0.00 0.00 0.00 3.72
207 208 8.874745 ATTGATCGAAAACTTAAATACGTGTG 57.125 30.769 0.00 0.00 0.00 3.82
208 209 9.962759 GTATTGATCGAAAACTTAAATACGTGT 57.037 29.630 0.00 0.00 0.00 4.49
209 210 9.961266 TGTATTGATCGAAAACTTAAATACGTG 57.039 29.630 0.00 0.00 33.68 4.49
218 219 8.946085 TGCTCTAATTGTATTGATCGAAAACTT 58.054 29.630 0.00 0.00 0.00 2.66
219 220 8.492673 TGCTCTAATTGTATTGATCGAAAACT 57.507 30.769 0.00 0.00 0.00 2.66
220 221 9.162793 CATGCTCTAATTGTATTGATCGAAAAC 57.837 33.333 0.00 0.00 0.00 2.43
221 222 9.108284 TCATGCTCTAATTGTATTGATCGAAAA 57.892 29.630 0.00 0.00 0.00 2.29
222 223 8.661352 TCATGCTCTAATTGTATTGATCGAAA 57.339 30.769 0.00 0.00 0.00 3.46
223 224 8.661352 TTCATGCTCTAATTGTATTGATCGAA 57.339 30.769 0.00 0.00 0.00 3.71
224 225 8.837788 ATTCATGCTCTAATTGTATTGATCGA 57.162 30.769 0.00 0.00 0.00 3.59
282 283 8.945193 TCTAGAGGCAATAATAAAGTGGGTATT 58.055 33.333 0.00 0.00 0.00 1.89
283 284 8.506196 TCTAGAGGCAATAATAAAGTGGGTAT 57.494 34.615 0.00 0.00 0.00 2.73
284 285 7.472945 GCTCTAGAGGCAATAATAAAGTGGGTA 60.473 40.741 21.23 0.00 0.00 3.69
285 286 6.689177 GCTCTAGAGGCAATAATAAAGTGGGT 60.689 42.308 21.23 0.00 0.00 4.51
286 287 5.703130 GCTCTAGAGGCAATAATAAAGTGGG 59.297 44.000 21.23 0.00 0.00 4.61
287 288 6.291377 TGCTCTAGAGGCAATAATAAAGTGG 58.709 40.000 21.23 0.00 36.71 4.00
288 289 7.976135 ATGCTCTAGAGGCAATAATAAAGTG 57.024 36.000 21.23 0.00 43.14 3.16
292 293 9.672673 GGAAATATGCTCTAGAGGCAATAATAA 57.327 33.333 21.23 4.32 43.14 1.40
293 294 8.825774 TGGAAATATGCTCTAGAGGCAATAATA 58.174 33.333 21.23 9.09 43.14 0.98
294 295 7.693132 TGGAAATATGCTCTAGAGGCAATAAT 58.307 34.615 21.23 11.28 43.14 1.28
295 296 7.078249 TGGAAATATGCTCTAGAGGCAATAA 57.922 36.000 21.23 9.78 43.14 1.40
296 297 6.686484 TGGAAATATGCTCTAGAGGCAATA 57.314 37.500 21.23 12.68 43.14 1.90
297 298 5.573380 TGGAAATATGCTCTAGAGGCAAT 57.427 39.130 21.23 11.82 43.14 3.56
298 299 5.126067 GTTGGAAATATGCTCTAGAGGCAA 58.874 41.667 21.23 10.37 43.14 4.52
299 300 4.164030 TGTTGGAAATATGCTCTAGAGGCA 59.836 41.667 21.23 18.27 44.05 4.75
300 301 4.708177 TGTTGGAAATATGCTCTAGAGGC 58.292 43.478 21.23 13.48 0.00 4.70
301 302 7.172875 CAGAATGTTGGAAATATGCTCTAGAGG 59.827 40.741 21.23 3.52 29.75 3.69
302 303 7.930325 TCAGAATGTTGGAAATATGCTCTAGAG 59.070 37.037 15.85 15.85 29.75 2.43
303 304 7.795047 TCAGAATGTTGGAAATATGCTCTAGA 58.205 34.615 0.00 0.00 29.75 2.43
304 305 8.442632 TTCAGAATGTTGGAAATATGCTCTAG 57.557 34.615 0.00 0.00 29.75 2.43
305 306 7.012704 GCTTCAGAATGTTGGAAATATGCTCTA 59.987 37.037 0.00 0.00 29.75 2.43
306 307 6.183360 GCTTCAGAATGTTGGAAATATGCTCT 60.183 38.462 0.00 0.00 29.75 4.09
307 308 5.975939 GCTTCAGAATGTTGGAAATATGCTC 59.024 40.000 0.00 0.00 29.75 4.26
308 309 5.655532 AGCTTCAGAATGTTGGAAATATGCT 59.344 36.000 0.00 0.00 32.90 3.79
309 310 5.899299 AGCTTCAGAATGTTGGAAATATGC 58.101 37.500 0.00 0.00 37.40 3.14
310 311 7.541162 TGAAGCTTCAGAATGTTGGAAATATG 58.459 34.615 25.16 0.00 37.40 1.78
311 312 7.707624 TGAAGCTTCAGAATGTTGGAAATAT 57.292 32.000 25.16 0.00 37.40 1.28
312 313 7.523293 TTGAAGCTTCAGAATGTTGGAAATA 57.477 32.000 27.02 6.44 38.61 1.40
313 314 6.409524 TTGAAGCTTCAGAATGTTGGAAAT 57.590 33.333 27.02 0.00 38.61 2.17
314 315 5.737063 GCTTGAAGCTTCAGAATGTTGGAAA 60.737 40.000 27.02 8.82 38.45 3.13
315 316 4.261741 GCTTGAAGCTTCAGAATGTTGGAA 60.262 41.667 27.02 9.32 38.45 3.53
316 317 3.254166 GCTTGAAGCTTCAGAATGTTGGA 59.746 43.478 27.02 10.02 38.45 3.53
317 318 3.572584 GCTTGAAGCTTCAGAATGTTGG 58.427 45.455 27.02 12.67 38.45 3.77
318 319 3.255149 AGGCTTGAAGCTTCAGAATGTTG 59.745 43.478 27.02 13.88 41.99 3.33
319 320 3.494332 AGGCTTGAAGCTTCAGAATGTT 58.506 40.909 27.02 10.96 41.99 2.71
320 321 3.151912 AGGCTTGAAGCTTCAGAATGT 57.848 42.857 27.02 11.14 41.99 2.71
321 322 5.831702 AATAGGCTTGAAGCTTCAGAATG 57.168 39.130 27.02 18.94 41.99 2.67
322 323 6.628185 CAAAATAGGCTTGAAGCTTCAGAAT 58.372 36.000 27.02 17.18 41.99 2.40
323 324 5.565439 GCAAAATAGGCTTGAAGCTTCAGAA 60.565 40.000 27.02 14.26 41.99 3.02
324 325 4.082571 GCAAAATAGGCTTGAAGCTTCAGA 60.083 41.667 27.02 17.41 41.99 3.27
325 326 4.171754 GCAAAATAGGCTTGAAGCTTCAG 58.828 43.478 27.02 21.21 41.99 3.02
326 327 3.573538 TGCAAAATAGGCTTGAAGCTTCA 59.426 39.130 25.16 25.16 41.99 3.02
327 328 4.171754 CTGCAAAATAGGCTTGAAGCTTC 58.828 43.478 19.89 19.89 41.99 3.86
328 329 3.575687 ACTGCAAAATAGGCTTGAAGCTT 59.424 39.130 17.59 12.45 41.99 3.74
329 330 3.160269 ACTGCAAAATAGGCTTGAAGCT 58.840 40.909 17.59 5.80 41.99 3.74
366 367 4.307259 AGGTCTCTGGCTCCCATATTTTA 58.693 43.478 0.00 0.00 30.82 1.52
439 440 3.369892 CCGACAGAATCTTCACCCTCATT 60.370 47.826 0.00 0.00 0.00 2.57
458 459 3.780804 TTTCAAAATCCAGACCTCCGA 57.219 42.857 0.00 0.00 0.00 4.55
471 472 9.033711 TGGATAGGATCATTCATGTTTTCAAAA 57.966 29.630 0.00 0.00 0.00 2.44
484 485 9.347240 CTAATGTGAAAGTTGGATAGGATCATT 57.653 33.333 0.00 0.00 0.00 2.57
515 516 2.285083 CAAACTCCTCAAACGTGGTCA 58.715 47.619 0.00 0.00 0.00 4.02
517 518 2.413310 ACAAACTCCTCAAACGTGGT 57.587 45.000 0.00 0.00 0.00 4.16
562 563 2.752358 CTGCCCAGGAGTTGCTCA 59.248 61.111 0.00 0.00 31.08 4.26
572 573 0.255318 ATCTTCCTTGAGCTGCCCAG 59.745 55.000 0.00 0.00 0.00 4.45
575 576 1.209019 TCAGATCTTCCTTGAGCTGCC 59.791 52.381 0.00 0.00 46.43 4.85
606 607 2.508300 AGTTATTCCCCTAACGGCACAT 59.492 45.455 0.00 0.00 36.83 3.21
612 613 8.365647 ACATATGTTCTAGTTATTCCCCTAACG 58.634 37.037 1.41 0.00 36.83 3.18
617 618 7.506114 TCACACATATGTTCTAGTTATTCCCC 58.494 38.462 5.37 0.00 36.72 4.81
706 708 7.865385 GTGAAAATGTTAAAATGTGGCAGTAGA 59.135 33.333 0.00 0.00 0.00 2.59
712 714 7.656707 ATGAGTGAAAATGTTAAAATGTGGC 57.343 32.000 0.00 0.00 0.00 5.01
713 715 9.044150 ACAATGAGTGAAAATGTTAAAATGTGG 57.956 29.630 0.00 0.00 0.00 4.17
753 759 2.993937 TCGGCAACCCTCGAAATAATT 58.006 42.857 0.00 0.00 32.11 1.40
761 767 2.018542 TCTAATTTCGGCAACCCTCG 57.981 50.000 0.00 0.00 0.00 4.63
765 771 5.354234 TCTCTGATTTCTAATTTCGGCAACC 59.646 40.000 0.00 0.00 0.00 3.77
771 777 6.477033 ACATCCGTCTCTGATTTCTAATTTCG 59.523 38.462 0.00 0.00 0.00 3.46
772 778 7.778470 ACATCCGTCTCTGATTTCTAATTTC 57.222 36.000 0.00 0.00 0.00 2.17
785 791 5.648092 CCATTTTCCTTAAACATCCGTCTCT 59.352 40.000 0.00 0.00 0.00 3.10
788 794 5.638596 ACCATTTTCCTTAAACATCCGTC 57.361 39.130 0.00 0.00 0.00 4.79
794 800 6.553100 AGTCATCCAACCATTTTCCTTAAACA 59.447 34.615 0.00 0.00 0.00 2.83
800 806 3.434309 CCAGTCATCCAACCATTTTCCT 58.566 45.455 0.00 0.00 0.00 3.36
805 811 1.637553 AGAGCCAGTCATCCAACCATT 59.362 47.619 0.00 0.00 0.00 3.16
821 827 5.828747 TGTCCGCGGATATAAATATAGAGC 58.171 41.667 33.58 13.44 0.00 4.09
822 828 8.873215 ATTTGTCCGCGGATATAAATATAGAG 57.127 34.615 33.58 0.00 0.00 2.43
826 832 9.391006 ACAATATTTGTCCGCGGATATAAATAT 57.609 29.630 33.73 33.73 40.56 1.28
827 833 8.661257 CACAATATTTGTCCGCGGATATAAATA 58.339 33.333 32.99 32.99 43.23 1.40
829 835 6.483974 ACACAATATTTGTCCGCGGATATAAA 59.516 34.615 33.58 29.02 43.23 1.40
830 836 5.992829 ACACAATATTTGTCCGCGGATATAA 59.007 36.000 33.58 24.16 43.23 0.98
832 838 4.385825 ACACAATATTTGTCCGCGGATAT 58.614 39.130 33.58 25.03 43.23 1.63
833 839 3.799366 ACACAATATTTGTCCGCGGATA 58.201 40.909 33.58 27.61 43.23 2.59
834 840 2.612212 GACACAATATTTGTCCGCGGAT 59.388 45.455 33.58 18.35 43.23 4.18
836 842 2.452006 GACACAATATTTGTCCGCGG 57.548 50.000 22.12 22.12 43.23 6.46
855 879 7.039784 TGACCCTTAAAATGTCTCTCAAAATGG 60.040 37.037 0.00 0.00 0.00 3.16
865 889 3.326880 AGGACGTGACCCTTAAAATGTCT 59.673 43.478 0.00 0.00 0.00 3.41
1389 4040 4.162690 GCCTCCGTCTCCGCCAAT 62.163 66.667 0.00 0.00 0.00 3.16
2282 7367 1.105759 GTGGAGATCATGGGGCTTGC 61.106 60.000 0.00 0.00 0.00 4.01
2370 7488 1.131218 CGTCGTCGCTCGTAAGTCA 59.869 57.895 0.00 0.00 40.80 3.41
2374 7492 2.476051 GTCCGTCGTCGCTCGTAA 59.524 61.111 0.00 0.00 40.80 3.18
2379 7497 3.392595 GAATCCGTCCGTCGTCGCT 62.393 63.158 0.00 0.00 37.94 4.93
2394 7512 2.612972 CGTGTACACCTCCTGCTTGAAT 60.613 50.000 20.11 0.00 0.00 2.57
2670 7791 3.419759 CACGCAACGCCCTGTACC 61.420 66.667 0.00 0.00 0.00 3.34
2684 7805 3.256558 TGAATGTTCATCTGCTCTCACG 58.743 45.455 0.00 0.00 31.01 4.35
2729 7886 2.173143 TGGCTTGATCATGCTGGTATGA 59.827 45.455 26.99 4.05 41.00 2.15
2791 7987 1.605710 GTCTCCAATTGGATCATGCCG 59.394 52.381 27.20 13.79 44.46 5.69
2805 8001 0.115152 TGCCCTTCTCTCTGTCTCCA 59.885 55.000 0.00 0.00 0.00 3.86
2922 8294 9.607988 CCATACACAACTTAACCTATGTATGAA 57.392 33.333 18.92 0.00 46.65 2.57
2924 8296 9.042008 GTCCATACACAACTTAACCTATGTATG 57.958 37.037 12.93 12.93 44.79 2.39
2925 8297 8.989131 AGTCCATACACAACTTAACCTATGTAT 58.011 33.333 0.00 0.00 34.41 2.29
2927 8299 7.253905 AGTCCATACACAACTTAACCTATGT 57.746 36.000 0.00 0.00 0.00 2.29
2928 8300 9.477484 GATAGTCCATACACAACTTAACCTATG 57.523 37.037 0.00 0.00 0.00 2.23
2929 8301 9.209048 TGATAGTCCATACACAACTTAACCTAT 57.791 33.333 0.00 0.00 0.00 2.57
2938 8317 8.942338 TGATAACTTGATAGTCCATACACAAC 57.058 34.615 0.00 0.00 31.99 3.32
3024 8428 3.503363 TGAAGGAACTAAGCAAGCACATG 59.497 43.478 0.00 0.00 38.49 3.21
3064 8473 0.540923 AGGAGCTCTGCCTCAACATC 59.459 55.000 14.64 0.00 33.47 3.06
3066 8475 1.675801 CAGGAGCTCTGCCTCAACA 59.324 57.895 14.64 0.00 36.60 3.33
3067 8476 4.613929 CAGGAGCTCTGCCTCAAC 57.386 61.111 14.64 0.00 36.60 3.18
3106 8515 6.974965 ACGTTATATTTTAGTACGGAGGGAG 58.025 40.000 0.00 0.00 36.60 4.30
3107 8516 6.959639 ACGTTATATTTTAGTACGGAGGGA 57.040 37.500 0.00 0.00 36.60 4.20
3108 8517 9.528018 TTAAACGTTATATTTTAGTACGGAGGG 57.472 33.333 0.00 0.00 36.60 4.30
3135 8544 8.950210 CCTCAGTGTCAAAATATACAGTTCAAT 58.050 33.333 0.00 0.00 0.00 2.57
3136 8545 7.936847 ACCTCAGTGTCAAAATATACAGTTCAA 59.063 33.333 0.00 0.00 0.00 2.69
3137 8546 7.450074 ACCTCAGTGTCAAAATATACAGTTCA 58.550 34.615 0.00 0.00 0.00 3.18
3138 8547 7.907214 ACCTCAGTGTCAAAATATACAGTTC 57.093 36.000 0.00 0.00 0.00 3.01
3139 8548 8.594550 ACTACCTCAGTGTCAAAATATACAGTT 58.405 33.333 0.00 0.00 35.62 3.16
3140 8549 8.135382 ACTACCTCAGTGTCAAAATATACAGT 57.865 34.615 0.00 0.00 35.62 3.55
3141 8550 9.517609 GTACTACCTCAGTGTCAAAATATACAG 57.482 37.037 0.00 0.00 38.24 2.74
3142 8551 9.251440 AGTACTACCTCAGTGTCAAAATATACA 57.749 33.333 0.00 0.00 38.24 2.29
3145 8554 8.258708 GGAAGTACTACCTCAGTGTCAAAATAT 58.741 37.037 0.00 0.00 38.24 1.28
3146 8555 7.453752 AGGAAGTACTACCTCAGTGTCAAAATA 59.546 37.037 0.00 0.00 38.24 1.40
3147 8556 6.270231 AGGAAGTACTACCTCAGTGTCAAAAT 59.730 38.462 0.00 0.00 38.24 1.82
3148 8557 5.601313 AGGAAGTACTACCTCAGTGTCAAAA 59.399 40.000 0.00 0.00 38.24 2.44
3149 8558 5.145564 AGGAAGTACTACCTCAGTGTCAAA 58.854 41.667 0.00 0.00 38.24 2.69
3150 8559 4.737578 AGGAAGTACTACCTCAGTGTCAA 58.262 43.478 0.00 0.00 38.24 3.18
3151 8560 4.383931 AGGAAGTACTACCTCAGTGTCA 57.616 45.455 0.00 0.00 38.24 3.58
3159 8568 2.622714 GGGAACGGAGGAAGTACTACCT 60.623 54.545 0.00 0.00 39.41 3.08
3160 8569 1.753649 GGGAACGGAGGAAGTACTACC 59.246 57.143 0.00 0.00 0.00 3.18
3161 8570 2.450476 TGGGAACGGAGGAAGTACTAC 58.550 52.381 0.00 0.00 0.00 2.73
3162 8571 2.905415 TGGGAACGGAGGAAGTACTA 57.095 50.000 0.00 0.00 0.00 1.82
3163 8572 2.019807 TTGGGAACGGAGGAAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
3164 8573 2.845363 TTTGGGAACGGAGGAAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
3165 8574 2.640826 ACATTTGGGAACGGAGGAAGTA 59.359 45.455 0.00 0.00 0.00 2.24
3166 8575 1.423921 ACATTTGGGAACGGAGGAAGT 59.576 47.619 0.00 0.00 0.00 3.01
3167 8576 2.200373 ACATTTGGGAACGGAGGAAG 57.800 50.000 0.00 0.00 0.00 3.46
3168 8577 3.073356 ACTTACATTTGGGAACGGAGGAA 59.927 43.478 0.00 0.00 0.00 3.36
3169 8578 2.640826 ACTTACATTTGGGAACGGAGGA 59.359 45.455 0.00 0.00 0.00 3.71
3170 8579 3.007635 GACTTACATTTGGGAACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
3171 8580 3.939066 AGACTTACATTTGGGAACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
3172 8581 4.360951 AAGACTTACATTTGGGAACGGA 57.639 40.909 0.00 0.00 0.00 4.69
3173 8582 4.277423 ACAAAGACTTACATTTGGGAACGG 59.723 41.667 3.08 0.00 40.05 4.44
3174 8583 5.432885 ACAAAGACTTACATTTGGGAACG 57.567 39.130 3.08 0.00 40.05 3.95
3175 8584 7.660208 TCTCTACAAAGACTTACATTTGGGAAC 59.340 37.037 3.08 0.00 40.05 3.62
3176 8585 7.741785 TCTCTACAAAGACTTACATTTGGGAA 58.258 34.615 3.08 0.00 40.05 3.97
3177 8586 7.311092 TCTCTACAAAGACTTACATTTGGGA 57.689 36.000 3.08 0.83 40.05 4.37
3178 8587 8.567285 AATCTCTACAAAGACTTACATTTGGG 57.433 34.615 3.08 0.00 40.05 4.12
3184 8593 9.219603 CCAATGAAATCTCTACAAAGACTTACA 57.780 33.333 0.00 0.00 0.00 2.41
3185 8594 9.436957 TCCAATGAAATCTCTACAAAGACTTAC 57.563 33.333 0.00 0.00 0.00 2.34
3187 8596 8.954350 CATCCAATGAAATCTCTACAAAGACTT 58.046 33.333 0.00 0.00 0.00 3.01
3188 8597 7.555554 CCATCCAATGAAATCTCTACAAAGACT 59.444 37.037 0.00 0.00 0.00 3.24
3189 8598 7.554118 TCCATCCAATGAAATCTCTACAAAGAC 59.446 37.037 0.00 0.00 0.00 3.01
3190 8599 7.554118 GTCCATCCAATGAAATCTCTACAAAGA 59.446 37.037 0.00 0.00 0.00 2.52
3191 8600 7.555554 AGTCCATCCAATGAAATCTCTACAAAG 59.444 37.037 0.00 0.00 0.00 2.77
3192 8601 7.405292 AGTCCATCCAATGAAATCTCTACAAA 58.595 34.615 0.00 0.00 0.00 2.83
3193 8602 6.962182 AGTCCATCCAATGAAATCTCTACAA 58.038 36.000 0.00 0.00 0.00 2.41
3194 8603 6.566079 AGTCCATCCAATGAAATCTCTACA 57.434 37.500 0.00 0.00 0.00 2.74
3195 8604 7.500992 TGTAGTCCATCCAATGAAATCTCTAC 58.499 38.462 0.00 0.00 0.00 2.59
3196 8605 7.675161 TGTAGTCCATCCAATGAAATCTCTA 57.325 36.000 0.00 0.00 0.00 2.43
3197 8606 6.566079 TGTAGTCCATCCAATGAAATCTCT 57.434 37.500 0.00 0.00 0.00 3.10
3198 8607 7.116948 CGTATGTAGTCCATCCAATGAAATCTC 59.883 40.741 0.00 0.00 34.86 2.75
3199 8608 6.931281 CGTATGTAGTCCATCCAATGAAATCT 59.069 38.462 0.00 0.00 34.86 2.40
3200 8609 6.147821 CCGTATGTAGTCCATCCAATGAAATC 59.852 42.308 0.00 0.00 34.86 2.17
3201 8610 5.997746 CCGTATGTAGTCCATCCAATGAAAT 59.002 40.000 0.00 0.00 34.86 2.17
3202 8611 5.129650 TCCGTATGTAGTCCATCCAATGAAA 59.870 40.000 0.00 0.00 34.86 2.69
3203 8612 4.651962 TCCGTATGTAGTCCATCCAATGAA 59.348 41.667 0.00 0.00 34.86 2.57
3204 8613 4.219919 TCCGTATGTAGTCCATCCAATGA 58.780 43.478 0.00 0.00 34.86 2.57
3205 8614 4.560128 CTCCGTATGTAGTCCATCCAATG 58.440 47.826 0.00 0.00 34.86 2.82
3206 8615 3.006967 GCTCCGTATGTAGTCCATCCAAT 59.993 47.826 0.00 0.00 34.86 3.16
3207 8616 2.364324 GCTCCGTATGTAGTCCATCCAA 59.636 50.000 0.00 0.00 34.86 3.53
3208 8617 1.961394 GCTCCGTATGTAGTCCATCCA 59.039 52.381 0.00 0.00 34.86 3.41
3209 8618 1.961394 TGCTCCGTATGTAGTCCATCC 59.039 52.381 0.00 0.00 34.86 3.51
3210 8619 3.728076 TTGCTCCGTATGTAGTCCATC 57.272 47.619 0.00 0.00 34.86 3.51
3211 8620 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
3212 8621 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
3213 8622 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
3214 8623 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
3215 8624 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
3216 8625 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
3217 8626 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
3218 8627 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
3219 8628 6.974048 TGAATTCATTCATTTTGCTCCGTATG 59.026 34.615 3.38 0.00 41.51 2.39
3220 8629 7.099266 TGAATTCATTCATTTTGCTCCGTAT 57.901 32.000 3.38 0.00 41.51 3.06
3221 8630 6.507958 TGAATTCATTCATTTTGCTCCGTA 57.492 33.333 3.38 0.00 41.51 4.02
3222 8631 5.389859 TGAATTCATTCATTTTGCTCCGT 57.610 34.783 3.38 0.00 41.51 4.69
3233 8642 9.142515 GATGCATTTTAAGTGTGAATTCATTCA 57.857 29.630 12.12 2.83 43.94 2.57
3234 8643 9.362539 AGATGCATTTTAAGTGTGAATTCATTC 57.637 29.630 12.12 7.96 37.31 2.67
3246 8655 9.944376 ACGGATGTATATAGATGCATTTTAAGT 57.056 29.630 11.19 0.00 38.38 2.24
3262 8671 9.392259 CCACTATGAACTAGATACGGATGTATA 57.608 37.037 0.00 0.00 41.37 1.47
3263 8672 8.107729 TCCACTATGAACTAGATACGGATGTAT 58.892 37.037 0.00 0.00 43.97 2.29
3264 8673 7.455891 TCCACTATGAACTAGATACGGATGTA 58.544 38.462 0.00 0.00 34.45 2.29
3265 8674 6.304624 TCCACTATGAACTAGATACGGATGT 58.695 40.000 0.00 0.00 0.00 3.06
3266 8675 6.819397 TCCACTATGAACTAGATACGGATG 57.181 41.667 0.00 0.00 0.00 3.51
3267 8676 7.891183 AGATTCCACTATGAACTAGATACGGAT 59.109 37.037 0.00 0.00 0.00 4.18
3268 8677 7.232188 AGATTCCACTATGAACTAGATACGGA 58.768 38.462 0.00 0.00 0.00 4.69
3269 8678 7.392113 AGAGATTCCACTATGAACTAGATACGG 59.608 40.741 0.00 0.00 0.00 4.02
3270 8679 8.330466 AGAGATTCCACTATGAACTAGATACG 57.670 38.462 0.00 0.00 0.00 3.06
3273 8682 9.647918 TTGTAGAGATTCCACTATGAACTAGAT 57.352 33.333 0.00 0.00 0.00 1.98
3274 8683 9.475620 TTTGTAGAGATTCCACTATGAACTAGA 57.524 33.333 0.00 0.00 0.00 2.43
3275 8684 9.743057 CTTTGTAGAGATTCCACTATGAACTAG 57.257 37.037 0.00 0.00 0.00 2.57
3276 8685 9.475620 TCTTTGTAGAGATTCCACTATGAACTA 57.524 33.333 0.00 0.00 0.00 2.24
3277 8686 8.254508 GTCTTTGTAGAGATTCCACTATGAACT 58.745 37.037 0.00 0.00 0.00 3.01
3278 8687 8.254508 AGTCTTTGTAGAGATTCCACTATGAAC 58.745 37.037 0.00 0.00 0.00 3.18
3279 8688 8.367660 AGTCTTTGTAGAGATTCCACTATGAA 57.632 34.615 0.00 0.00 0.00 2.57
3280 8689 7.962995 AGTCTTTGTAGAGATTCCACTATGA 57.037 36.000 0.00 0.00 0.00 2.15
3296 8705 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
3297 8706 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
3298 8707 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
3299 8708 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
3300 8709 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
3301 8710 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
3302 8711 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
3303 8712 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3306 8715 8.912614 AATATACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
3307 8716 8.731591 AAATATACTCCCTCCGTTCCTAAATA 57.268 34.615 0.00 0.00 0.00 1.40
3308 8717 7.628501 AAATATACTCCCTCCGTTCCTAAAT 57.371 36.000 0.00 0.00 0.00 1.40
3309 8718 7.441903 AAAATATACTCCCTCCGTTCCTAAA 57.558 36.000 0.00 0.00 0.00 1.85
3310 8719 8.731591 ATAAAATATACTCCCTCCGTTCCTAA 57.268 34.615 0.00 0.00 0.00 2.69
3311 8720 7.951806 TGATAAAATATACTCCCTCCGTTCCTA 59.048 37.037 0.00 0.00 0.00 2.94
3312 8721 6.785963 TGATAAAATATACTCCCTCCGTTCCT 59.214 38.462 0.00 0.00 0.00 3.36
3313 8722 7.001099 TGATAAAATATACTCCCTCCGTTCC 57.999 40.000 0.00 0.00 0.00 3.62
3366 8778 7.870509 TGCATGCTCAGATAGACTTTATTTT 57.129 32.000 20.33 0.00 0.00 1.82
3383 8988 5.345702 GTCAAACATATCACAATGCATGCT 58.654 37.500 20.33 1.07 0.00 3.79
3384 8989 4.505191 GGTCAAACATATCACAATGCATGC 59.495 41.667 11.82 11.82 0.00 4.06
3385 8990 5.652518 TGGTCAAACATATCACAATGCATG 58.347 37.500 0.00 0.00 0.00 4.06
3386 8991 5.918426 TGGTCAAACATATCACAATGCAT 57.082 34.783 0.00 0.00 0.00 3.96
3387 8992 5.718724 TTGGTCAAACATATCACAATGCA 57.281 34.783 0.00 0.00 0.00 3.96
3403 9008 5.168647 ACCGAACCTTGTATATTTGGTCA 57.831 39.130 0.00 0.00 35.54 4.02
3406 9011 7.619964 AAACTACCGAACCTTGTATATTTGG 57.380 36.000 0.00 0.00 33.64 3.28
3416 9021 5.039920 AGTACCAAAAACTACCGAACCTT 57.960 39.130 0.00 0.00 0.00 3.50
3428 9033 1.072648 CTCCCACCCGAGTACCAAAAA 59.927 52.381 0.00 0.00 0.00 1.94
3438 9043 1.961133 AGGATAAAACTCCCACCCGA 58.039 50.000 0.00 0.00 35.79 5.14
3439 9044 2.482490 CGTAGGATAAAACTCCCACCCG 60.482 54.545 0.00 0.00 35.79 5.28
3451 9059 5.242171 TGATGCGGAAGAATACGTAGGATAA 59.758 40.000 0.08 0.00 0.00 1.75
3567 9451 7.609760 TGATAGATTGCTACGTTCACATTTT 57.390 32.000 0.00 0.00 0.00 1.82
3571 9455 5.474825 TGTTGATAGATTGCTACGTTCACA 58.525 37.500 0.00 0.00 0.00 3.58
3597 9481 6.260050 GGACGAGGCTATTATGTTTCATTCAA 59.740 38.462 0.00 0.00 0.00 2.69
3612 9496 0.106819 GGGACTAGTGGACGAGGCTA 60.107 60.000 0.00 0.00 0.00 3.93
3640 9558 7.217200 ACTAGATAAGTTGCAGACACAAGAAA 58.783 34.615 0.00 0.00 33.35 2.52
3667 9585 0.328258 CTTCGGGGGAACAAGGATGT 59.672 55.000 0.00 0.00 43.14 3.06
3668 9586 0.394352 CCTTCGGGGGAACAAGGATG 60.394 60.000 0.00 0.00 39.36 3.51
3669 9587 0.845102 ACCTTCGGGGGAACAAGGAT 60.845 55.000 3.94 0.00 39.36 3.24
3670 9588 1.462627 ACCTTCGGGGGAACAAGGA 60.463 57.895 3.94 0.00 39.36 3.36
3671 9589 3.167414 ACCTTCGGGGGAACAAGG 58.833 61.111 1.80 0.00 42.27 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.