Multiple sequence alignment - TraesCS2B01G459700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G459700 chr2B 100.000 2552 0 0 1 2552 653807353 653809904 0.000000e+00 4713
1 TraesCS2B01G459700 chr2B 84.524 924 98 25 795 1712 653796097 653796981 0.000000e+00 872
2 TraesCS2B01G459700 chr2B 83.131 824 99 18 907 1718 653788314 653789109 0.000000e+00 715
3 TraesCS2B01G459700 chr2B 82.609 598 77 15 1727 2301 653800485 653801078 1.050000e-138 503
4 TraesCS2B01G459700 chr2B 79.843 382 64 10 316 697 653760938 653761306 1.510000e-67 267
5 TraesCS2B01G459700 chr2A 91.731 1415 78 13 910 2301 691392078 691390680 0.000000e+00 1929
6 TraesCS2B01G459700 chr2A 84.073 992 108 28 729 1694 690747216 690748183 0.000000e+00 911
7 TraesCS2B01G459700 chr2A 85.480 854 107 9 840 1691 690805275 690806113 0.000000e+00 874
8 TraesCS2B01G459700 chr2A 80.987 547 102 2 151 697 690745193 690745737 1.400000e-117 433
9 TraesCS2B01G459700 chr2D 88.965 1604 103 26 729 2301 547574354 547575914 0.000000e+00 1914
10 TraesCS2B01G459700 chr2D 91.005 1423 89 13 907 2301 547559397 547560808 0.000000e+00 1882
11 TraesCS2B01G459700 chr2D 86.667 795 86 9 907 1694 547489167 547489948 0.000000e+00 863
12 TraesCS2B01G459700 chr2D 82.951 1003 107 30 729 1694 547278067 547279042 0.000000e+00 846
13 TraesCS2B01G459700 chr2D 83.850 904 107 17 795 1694 547450623 547451491 0.000000e+00 824
14 TraesCS2B01G459700 chr2D 83.211 953 102 29 795 1718 547286306 547287229 0.000000e+00 821
15 TraesCS2B01G459700 chr2D 85.674 712 67 10 1 697 547572651 547573342 0.000000e+00 717
16 TraesCS2B01G459700 chr5A 80.412 291 39 9 1429 1714 602413163 602413440 3.330000e-49 206


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G459700 chr2B 653807353 653809904 2551 False 4713.0 4713 100.0000 1 2552 1 chr2B.!!$F3 2551
1 TraesCS2B01G459700 chr2B 653788314 653789109 795 False 715.0 715 83.1310 907 1718 1 chr2B.!!$F2 811
2 TraesCS2B01G459700 chr2B 653796097 653801078 4981 False 687.5 872 83.5665 795 2301 2 chr2B.!!$F4 1506
3 TraesCS2B01G459700 chr2A 691390680 691392078 1398 True 1929.0 1929 91.7310 910 2301 1 chr2A.!!$R1 1391
4 TraesCS2B01G459700 chr2A 690805275 690806113 838 False 874.0 874 85.4800 840 1691 1 chr2A.!!$F1 851
5 TraesCS2B01G459700 chr2A 690745193 690748183 2990 False 672.0 911 82.5300 151 1694 2 chr2A.!!$F2 1543
6 TraesCS2B01G459700 chr2D 547559397 547560808 1411 False 1882.0 1882 91.0050 907 2301 1 chr2D.!!$F5 1394
7 TraesCS2B01G459700 chr2D 547572651 547575914 3263 False 1315.5 1914 87.3195 1 2301 2 chr2D.!!$F6 2300
8 TraesCS2B01G459700 chr2D 547489167 547489948 781 False 863.0 863 86.6670 907 1694 1 chr2D.!!$F4 787
9 TraesCS2B01G459700 chr2D 547278067 547279042 975 False 846.0 846 82.9510 729 1694 1 chr2D.!!$F1 965
10 TraesCS2B01G459700 chr2D 547450623 547451491 868 False 824.0 824 83.8500 795 1694 1 chr2D.!!$F3 899
11 TraesCS2B01G459700 chr2D 547286306 547287229 923 False 821.0 821 83.2110 795 1718 1 chr2D.!!$F2 923

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
531 547 0.17576 TCTTCACTGCCATCGTAGCC 59.824 55.0 0.0 0.0 0.0 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2434 7825 0.249489 CGGGCGGTCTTGATTCTAGG 60.249 60.0 0.0 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.527370 GGATGGTGTAGCCCTGGAC 59.473 63.158 0.00 0.00 36.04 4.02
25 26 1.080025 GTGTAGCCCTGGACGTGTC 60.080 63.158 0.00 0.00 0.00 3.67
47 48 2.400399 GTCGACATTTGAGACGTTCCA 58.600 47.619 11.55 0.00 0.00 3.53
78 79 1.141858 GCCTTGGAGATGTCCTTAGGG 59.858 57.143 23.15 14.99 44.30 3.53
81 82 3.309296 CTTGGAGATGTCCTTAGGGCTA 58.691 50.000 10.72 0.00 44.30 3.93
87 88 5.281297 GGAGATGTCCTTAGGGCTAGAGATA 60.281 48.000 3.93 0.00 40.17 1.98
90 91 3.465966 TGTCCTTAGGGCTAGAGATACCA 59.534 47.826 3.93 0.00 0.00 3.25
153 154 7.125963 GGTATTAACCCTTAGCTAGCATATCCT 59.874 40.741 18.83 0.00 40.21 3.24
155 156 4.899352 ACCCTTAGCTAGCATATCCTTG 57.101 45.455 18.83 0.00 0.00 3.61
159 175 5.936956 CCCTTAGCTAGCATATCCTTGAAAG 59.063 44.000 18.83 4.40 0.00 2.62
167 183 9.145865 GCTAGCATATCCTTGAAAGTTATAGTC 57.854 37.037 10.63 0.00 0.00 2.59
192 208 1.047002 TCCCAAAAAGGCACCATGTG 58.953 50.000 0.00 0.00 36.51 3.21
218 234 1.039856 TTTTGCTCCAAGAAGGGCAC 58.960 50.000 0.00 0.00 41.37 5.01
247 263 2.489938 AAAAATGGGAGACTGCGCTA 57.510 45.000 9.73 0.00 0.00 4.26
255 271 1.305381 AGACTGCGCTACCCCTCTT 60.305 57.895 9.73 0.00 0.00 2.85
345 361 1.993301 CCTACCACCCCCTTCTCTTTT 59.007 52.381 0.00 0.00 0.00 2.27
374 390 2.029470 GTGCCAAAATCAACCCGATTCA 60.029 45.455 0.00 0.00 43.83 2.57
380 396 2.142356 ATCAACCCGATTCATTGCCA 57.858 45.000 0.00 0.00 0.00 4.92
387 403 2.033801 CCCGATTCATTGCCAACATCTC 59.966 50.000 0.00 0.00 0.00 2.75
392 408 2.439409 TCATTGCCAACATCTCCACAG 58.561 47.619 0.00 0.00 0.00 3.66
400 416 3.405831 CAACATCTCCACAGAGCTTCAA 58.594 45.455 0.00 0.00 40.22 2.69
404 420 1.556911 TCTCCACAGAGCTTCAATCCC 59.443 52.381 0.00 0.00 40.22 3.85
405 421 1.280133 CTCCACAGAGCTTCAATCCCA 59.720 52.381 0.00 0.00 32.13 4.37
407 423 1.271543 CCACAGAGCTTCAATCCCACA 60.272 52.381 0.00 0.00 0.00 4.17
476 492 1.153628 CAGTAGTAGCCCCGTGTGC 60.154 63.158 0.00 0.00 0.00 4.57
526 542 1.363744 GACCTTCTTCACTGCCATCG 58.636 55.000 0.00 0.00 0.00 3.84
528 544 1.899814 ACCTTCTTCACTGCCATCGTA 59.100 47.619 0.00 0.00 0.00 3.43
531 547 0.175760 TCTTCACTGCCATCGTAGCC 59.824 55.000 0.00 0.00 0.00 3.93
548 564 2.511452 CCGATCTCCCCGCCATTCT 61.511 63.158 0.00 0.00 0.00 2.40
552 568 0.181350 ATCTCCCCGCCATTCTTGTC 59.819 55.000 0.00 0.00 0.00 3.18
589 605 1.956170 CCGTCGTGGCCTATGCATC 60.956 63.158 0.19 0.00 40.13 3.91
592 608 0.601311 GTCGTGGCCTATGCATCTCC 60.601 60.000 0.19 3.48 40.13 3.71
621 637 1.008079 GCGTTGCAGCAGCTTCTTT 60.008 52.632 7.73 0.00 42.74 2.52
634 650 3.060003 CAGCTTCTTTATCGAATCTGCCG 60.060 47.826 0.00 0.00 32.50 5.69
635 651 2.221981 GCTTCTTTATCGAATCTGCCGG 59.778 50.000 0.00 0.00 0.00 6.13
641 657 2.254546 ATCGAATCTGCCGGCAAATA 57.745 45.000 32.09 19.20 0.00 1.40
649 665 0.741574 TGCCGGCAAATAGTACACCG 60.742 55.000 30.74 0.00 43.44 4.94
653 669 0.741927 GGCAAATAGTACACCGCCGT 60.742 55.000 0.00 0.00 0.00 5.68
690 706 1.767759 ATCTGGCAAGGCATAACACC 58.232 50.000 0.00 0.00 0.00 4.16
697 713 1.067915 CAAGGCATAACACCAAACCCG 60.068 52.381 0.00 0.00 0.00 5.28
698 714 0.402504 AGGCATAACACCAAACCCGA 59.597 50.000 0.00 0.00 0.00 5.14
699 715 0.808755 GGCATAACACCAAACCCGAG 59.191 55.000 0.00 0.00 0.00 4.63
700 716 1.612199 GGCATAACACCAAACCCGAGA 60.612 52.381 0.00 0.00 0.00 4.04
701 717 1.737793 GCATAACACCAAACCCGAGAG 59.262 52.381 0.00 0.00 0.00 3.20
710 2067 4.344102 CACCAAACCCGAGAGATATAGGAA 59.656 45.833 0.00 0.00 0.00 3.36
715 2072 5.579753 ACCCGAGAGATATAGGAAGTGTA 57.420 43.478 0.00 0.00 0.00 2.90
716 2073 6.142259 ACCCGAGAGATATAGGAAGTGTAT 57.858 41.667 0.00 0.00 0.00 2.29
717 2074 6.181908 ACCCGAGAGATATAGGAAGTGTATC 58.818 44.000 0.00 0.00 31.00 2.24
718 2075 5.591067 CCCGAGAGATATAGGAAGTGTATCC 59.409 48.000 0.00 0.00 39.96 2.59
771 2578 5.744666 TTTTGTTACGAAAGGAAGGTCAG 57.255 39.130 0.00 0.00 32.06 3.51
772 2579 4.411256 TTGTTACGAAAGGAAGGTCAGT 57.589 40.909 0.00 0.00 32.06 3.41
775 2587 2.256117 ACGAAAGGAAGGTCAGTTGG 57.744 50.000 0.00 0.00 0.00 3.77
777 2589 2.224305 ACGAAAGGAAGGTCAGTTGGAG 60.224 50.000 0.00 0.00 0.00 3.86
781 2593 2.972348 AGGAAGGTCAGTTGGAGTACA 58.028 47.619 0.00 0.00 0.00 2.90
785 2597 5.726793 AGGAAGGTCAGTTGGAGTACAATAT 59.273 40.000 0.00 0.00 41.95 1.28
828 2655 6.869695 TGTTAATTCTCGGTAGCAGTGAATA 58.130 36.000 0.00 0.00 33.25 1.75
868 2700 3.126171 TGAACGCTTCATGTTAATTCCCG 59.874 43.478 0.00 0.00 34.08 5.14
888 2720 1.464997 GGAAGTCCAAACTGACGCATC 59.535 52.381 0.00 0.00 40.26 3.91
934 2769 1.134037 TGTGCAAGTTAACCCCTCGTT 60.134 47.619 0.88 0.00 38.57 3.85
1005 2842 0.795085 GCTCACAGTCACAGATGCAC 59.205 55.000 0.00 0.00 0.00 4.57
1585 3446 3.676324 CGGAAGCTACGTCAGGAAAGATT 60.676 47.826 0.00 0.00 0.00 2.40
1644 3514 0.169451 GGTCCGGCGTTTTATGGTTG 59.831 55.000 6.01 0.00 0.00 3.77
1810 7170 1.771073 TTGCTAGCACGTGCACACAC 61.771 55.000 39.21 23.85 45.16 3.82
1819 7189 2.409715 CACGTGCACACACTCATCTTAG 59.590 50.000 18.64 0.00 45.10 2.18
1820 7190 2.296190 ACGTGCACACACTCATCTTAGA 59.704 45.455 18.64 0.00 45.10 2.10
1821 7191 3.243737 ACGTGCACACACTCATCTTAGAA 60.244 43.478 18.64 0.00 45.10 2.10
1822 7192 3.740832 CGTGCACACACTCATCTTAGAAA 59.259 43.478 18.64 0.00 45.10 2.52
1823 7193 4.211164 CGTGCACACACTCATCTTAGAAAA 59.789 41.667 18.64 0.00 45.10 2.29
1824 7194 5.444122 GTGCACACACTCATCTTAGAAAAC 58.556 41.667 13.17 0.00 43.85 2.43
1825 7195 4.515191 TGCACACACTCATCTTAGAAAACC 59.485 41.667 0.00 0.00 0.00 3.27
1826 7196 4.083271 GCACACACTCATCTTAGAAAACCC 60.083 45.833 0.00 0.00 0.00 4.11
1827 7197 5.063204 CACACACTCATCTTAGAAAACCCA 58.937 41.667 0.00 0.00 0.00 4.51
1914 7284 3.864789 AGGTTGGACAGTGAGTTGATT 57.135 42.857 0.00 0.00 0.00 2.57
1931 7301 2.625314 TGATTGCCGTTGGTTTGATGAA 59.375 40.909 0.00 0.00 0.00 2.57
1943 7313 3.004315 GGTTTGATGAAGCGGAGTTGAAA 59.996 43.478 0.00 0.00 0.00 2.69
1949 7319 4.027572 TGAAGCGGAGTTGAAAGTTTTG 57.972 40.909 0.00 0.00 0.00 2.44
1950 7320 3.692101 TGAAGCGGAGTTGAAAGTTTTGA 59.308 39.130 0.00 0.00 0.00 2.69
1951 7321 3.692791 AGCGGAGTTGAAAGTTTTGAC 57.307 42.857 0.00 0.00 0.00 3.18
1952 7322 2.031683 AGCGGAGTTGAAAGTTTTGACG 59.968 45.455 0.00 0.00 0.00 4.35
2003 7374 6.037830 TGGAATTGCTACGTCTAATAAAAGCC 59.962 38.462 0.00 0.00 0.00 4.35
2018 7398 4.670896 AAAAGCCAAGTAACATTGCACT 57.329 36.364 0.00 0.00 0.00 4.40
2078 7462 3.875134 ACACCTTTCGGTTACACTTCAAG 59.125 43.478 0.00 0.00 42.13 3.02
2193 7584 5.741388 AACAGATGGCGAATTACTGAATC 57.259 39.130 0.00 0.00 33.53 2.52
2194 7585 4.769688 ACAGATGGCGAATTACTGAATCA 58.230 39.130 0.00 0.00 33.53 2.57
2216 7607 3.019564 GTCCTTCTCCATTTGACCATGG 58.980 50.000 11.19 11.19 44.80 3.66
2236 7627 1.126113 GTGATGTTGTTACTCCGTGCG 59.874 52.381 0.00 0.00 0.00 5.34
2284 7675 1.200519 CCGATGGTTCCCAGTCCTAA 58.799 55.000 0.00 0.00 36.75 2.69
2301 7692 5.780793 AGTCCTAACATGTCTATGGGTATCC 59.219 44.000 0.00 0.00 38.66 2.59
2302 7693 5.780793 GTCCTAACATGTCTATGGGTATCCT 59.219 44.000 0.00 0.00 38.66 3.24
2303 7694 6.270231 GTCCTAACATGTCTATGGGTATCCTT 59.730 42.308 0.00 0.00 38.66 3.36
2304 7695 6.497259 TCCTAACATGTCTATGGGTATCCTTC 59.503 42.308 0.00 0.00 38.66 3.46
2305 7696 6.270000 CCTAACATGTCTATGGGTATCCTTCA 59.730 42.308 0.00 0.00 38.66 3.02
2306 7697 6.575244 AACATGTCTATGGGTATCCTTCAA 57.425 37.500 0.00 0.00 38.66 2.69
2307 7698 6.575244 ACATGTCTATGGGTATCCTTCAAA 57.425 37.500 0.00 0.00 38.66 2.69
2308 7699 7.154191 ACATGTCTATGGGTATCCTTCAAAT 57.846 36.000 0.00 0.00 38.66 2.32
2309 7700 7.000472 ACATGTCTATGGGTATCCTTCAAATG 59.000 38.462 0.00 0.00 38.66 2.32
2310 7701 5.940617 TGTCTATGGGTATCCTTCAAATGG 58.059 41.667 0.00 0.00 0.00 3.16
2311 7702 5.431731 TGTCTATGGGTATCCTTCAAATGGT 59.568 40.000 0.00 0.00 0.00 3.55
2312 7703 6.069088 TGTCTATGGGTATCCTTCAAATGGTT 60.069 38.462 0.00 0.00 0.00 3.67
2313 7704 6.263168 GTCTATGGGTATCCTTCAAATGGTTG 59.737 42.308 0.00 0.00 35.95 3.77
2314 7705 3.707316 TGGGTATCCTTCAAATGGTTGG 58.293 45.455 0.00 0.00 35.29 3.77
2315 7706 3.031013 GGGTATCCTTCAAATGGTTGGG 58.969 50.000 0.00 0.00 35.29 4.12
2316 7707 3.309556 GGGTATCCTTCAAATGGTTGGGA 60.310 47.826 0.00 0.00 35.29 4.37
2317 7708 4.349365 GGTATCCTTCAAATGGTTGGGAA 58.651 43.478 0.00 0.00 35.29 3.97
2318 7709 4.775253 GGTATCCTTCAAATGGTTGGGAAA 59.225 41.667 0.00 0.00 35.29 3.13
2319 7710 5.425217 GGTATCCTTCAAATGGTTGGGAAAT 59.575 40.000 0.00 0.00 35.29 2.17
2320 7711 4.888326 TCCTTCAAATGGTTGGGAAATG 57.112 40.909 0.00 0.00 35.29 2.32
2321 7712 3.007831 TCCTTCAAATGGTTGGGAAATGC 59.992 43.478 0.00 0.00 35.29 3.56
2322 7713 3.008266 CCTTCAAATGGTTGGGAAATGCT 59.992 43.478 0.00 0.00 35.29 3.79
2323 7714 4.505390 CCTTCAAATGGTTGGGAAATGCTT 60.505 41.667 0.00 0.00 35.29 3.91
2324 7715 4.005487 TCAAATGGTTGGGAAATGCTTG 57.995 40.909 0.00 0.00 35.29 4.01
2325 7716 3.390639 TCAAATGGTTGGGAAATGCTTGT 59.609 39.130 0.00 0.00 35.29 3.16
2326 7717 4.136051 CAAATGGTTGGGAAATGCTTGTT 58.864 39.130 0.00 0.00 0.00 2.83
2327 7718 5.070981 TCAAATGGTTGGGAAATGCTTGTTA 59.929 36.000 0.00 0.00 35.29 2.41
2328 7719 5.760484 AATGGTTGGGAAATGCTTGTTAT 57.240 34.783 0.00 0.00 0.00 1.89
2329 7720 5.760484 ATGGTTGGGAAATGCTTGTTATT 57.240 34.783 0.00 0.00 0.00 1.40
2330 7721 6.865834 ATGGTTGGGAAATGCTTGTTATTA 57.134 33.333 0.00 0.00 0.00 0.98
2331 7722 6.672266 TGGTTGGGAAATGCTTGTTATTAA 57.328 33.333 0.00 0.00 0.00 1.40
2332 7723 6.459923 TGGTTGGGAAATGCTTGTTATTAAC 58.540 36.000 0.00 0.00 0.00 2.01
2333 7724 5.575218 GGTTGGGAAATGCTTGTTATTAACG 59.425 40.000 2.30 0.00 0.00 3.18
2334 7725 5.968528 TGGGAAATGCTTGTTATTAACGT 57.031 34.783 2.30 0.00 0.00 3.99
2335 7726 6.334102 TGGGAAATGCTTGTTATTAACGTT 57.666 33.333 5.88 5.88 0.00 3.99
2336 7727 6.153067 TGGGAAATGCTTGTTATTAACGTTG 58.847 36.000 11.99 0.00 0.00 4.10
2337 7728 6.153756 GGGAAATGCTTGTTATTAACGTTGT 58.846 36.000 11.99 1.90 0.00 3.32
2338 7729 7.040617 TGGGAAATGCTTGTTATTAACGTTGTA 60.041 33.333 11.99 0.83 0.00 2.41
2339 7730 7.271868 GGGAAATGCTTGTTATTAACGTTGTAC 59.728 37.037 11.99 4.17 0.00 2.90
2340 7731 7.804129 GGAAATGCTTGTTATTAACGTTGTACA 59.196 33.333 11.99 6.77 0.00 2.90
2341 7732 8.722342 AAATGCTTGTTATTAACGTTGTACAG 57.278 30.769 11.99 0.00 0.00 2.74
2342 7733 7.661127 ATGCTTGTTATTAACGTTGTACAGA 57.339 32.000 11.99 0.00 0.00 3.41
2343 7734 7.479897 TGCTTGTTATTAACGTTGTACAGAA 57.520 32.000 11.99 0.00 0.00 3.02
2344 7735 7.917597 TGCTTGTTATTAACGTTGTACAGAAA 58.082 30.769 11.99 0.00 0.00 2.52
2345 7736 8.396390 TGCTTGTTATTAACGTTGTACAGAAAA 58.604 29.630 11.99 0.00 0.00 2.29
2346 7737 9.389570 GCTTGTTATTAACGTTGTACAGAAAAT 57.610 29.630 11.99 2.45 0.00 1.82
2376 7767 8.785329 TTTATTGACATGTGCAGTACTAATCA 57.215 30.769 1.15 0.00 0.00 2.57
2377 7768 8.962884 TTATTGACATGTGCAGTACTAATCAT 57.037 30.769 1.15 0.00 0.00 2.45
2380 7771 8.593492 TTGACATGTGCAGTACTAATCATATC 57.407 34.615 1.15 0.33 0.00 1.63
2381 7772 7.154656 TGACATGTGCAGTACTAATCATATCC 58.845 38.462 1.15 0.00 0.00 2.59
2382 7773 6.467677 ACATGTGCAGTACTAATCATATCCC 58.532 40.000 0.00 0.00 0.00 3.85
2383 7774 6.043127 ACATGTGCAGTACTAATCATATCCCA 59.957 38.462 0.00 0.00 0.00 4.37
2384 7775 5.853936 TGTGCAGTACTAATCATATCCCAC 58.146 41.667 0.00 0.00 0.00 4.61
2385 7776 5.221641 TGTGCAGTACTAATCATATCCCACC 60.222 44.000 0.00 0.00 0.00 4.61
2386 7777 5.012148 GTGCAGTACTAATCATATCCCACCT 59.988 44.000 0.00 0.00 0.00 4.00
2387 7778 5.606749 TGCAGTACTAATCATATCCCACCTT 59.393 40.000 0.00 0.00 0.00 3.50
2388 7779 6.101150 TGCAGTACTAATCATATCCCACCTTT 59.899 38.462 0.00 0.00 0.00 3.11
2389 7780 6.998673 GCAGTACTAATCATATCCCACCTTTT 59.001 38.462 0.00 0.00 0.00 2.27
2390 7781 7.041098 GCAGTACTAATCATATCCCACCTTTTG 60.041 40.741 0.00 0.00 0.00 2.44
2391 7782 7.445402 CAGTACTAATCATATCCCACCTTTTGG 59.555 40.741 0.00 0.00 46.47 3.28
2405 7796 4.993029 CCTTTTGGGTACACTTCAACAA 57.007 40.909 0.00 0.00 35.46 2.83
2406 7797 5.529581 CCTTTTGGGTACACTTCAACAAT 57.470 39.130 0.00 0.00 35.46 2.71
2407 7798 5.528870 CCTTTTGGGTACACTTCAACAATC 58.471 41.667 0.00 0.00 35.46 2.67
2408 7799 5.508994 CCTTTTGGGTACACTTCAACAATCC 60.509 44.000 0.00 0.00 35.46 3.01
2409 7800 3.866703 TGGGTACACTTCAACAATCCA 57.133 42.857 0.00 0.00 0.00 3.41
2410 7801 3.482436 TGGGTACACTTCAACAATCCAC 58.518 45.455 0.00 0.00 0.00 4.02
2411 7802 3.137544 TGGGTACACTTCAACAATCCACT 59.862 43.478 0.00 0.00 0.00 4.00
2412 7803 4.348461 TGGGTACACTTCAACAATCCACTA 59.652 41.667 0.00 0.00 0.00 2.74
2413 7804 5.013704 TGGGTACACTTCAACAATCCACTAT 59.986 40.000 0.00 0.00 0.00 2.12
2414 7805 5.585047 GGGTACACTTCAACAATCCACTATC 59.415 44.000 0.00 0.00 0.00 2.08
2415 7806 6.407202 GGTACACTTCAACAATCCACTATCT 58.593 40.000 0.00 0.00 0.00 1.98
2416 7807 7.364408 GGGTACACTTCAACAATCCACTATCTA 60.364 40.741 0.00 0.00 0.00 1.98
2417 7808 7.491696 GGTACACTTCAACAATCCACTATCTAC 59.508 40.741 0.00 0.00 0.00 2.59
2418 7809 6.407202 ACACTTCAACAATCCACTATCTACC 58.593 40.000 0.00 0.00 0.00 3.18
2419 7810 6.013725 ACACTTCAACAATCCACTATCTACCA 60.014 38.462 0.00 0.00 0.00 3.25
2420 7811 6.536582 CACTTCAACAATCCACTATCTACCAG 59.463 42.308 0.00 0.00 0.00 4.00
2421 7812 6.213600 ACTTCAACAATCCACTATCTACCAGT 59.786 38.462 0.00 0.00 0.00 4.00
2422 7813 7.399191 ACTTCAACAATCCACTATCTACCAGTA 59.601 37.037 0.00 0.00 0.00 2.74
2423 7814 7.727578 TCAACAATCCACTATCTACCAGTAA 57.272 36.000 0.00 0.00 0.00 2.24
2424 7815 8.319057 TCAACAATCCACTATCTACCAGTAAT 57.681 34.615 0.00 0.00 0.00 1.89
2425 7816 8.421784 TCAACAATCCACTATCTACCAGTAATC 58.578 37.037 0.00 0.00 0.00 1.75
2426 7817 6.982852 ACAATCCACTATCTACCAGTAATCG 58.017 40.000 0.00 0.00 0.00 3.34
2427 7818 6.776116 ACAATCCACTATCTACCAGTAATCGA 59.224 38.462 0.00 0.00 0.00 3.59
2428 7819 6.821031 ATCCACTATCTACCAGTAATCGAC 57.179 41.667 0.00 0.00 0.00 4.20
2429 7820 5.687780 TCCACTATCTACCAGTAATCGACA 58.312 41.667 0.00 0.00 0.00 4.35
2430 7821 6.124340 TCCACTATCTACCAGTAATCGACAA 58.876 40.000 0.00 0.00 0.00 3.18
2431 7822 6.604396 TCCACTATCTACCAGTAATCGACAAA 59.396 38.462 0.00 0.00 0.00 2.83
2432 7823 7.287005 TCCACTATCTACCAGTAATCGACAAAT 59.713 37.037 0.00 0.00 0.00 2.32
2433 7824 7.926555 CCACTATCTACCAGTAATCGACAAATT 59.073 37.037 0.00 0.00 0.00 1.82
2434 7825 8.969267 CACTATCTACCAGTAATCGACAAATTC 58.031 37.037 0.00 0.00 0.00 2.17
2435 7826 8.142551 ACTATCTACCAGTAATCGACAAATTCC 58.857 37.037 0.00 0.00 0.00 3.01
2436 7827 6.540438 TCTACCAGTAATCGACAAATTCCT 57.460 37.500 0.00 0.00 0.00 3.36
2437 7828 7.649533 TCTACCAGTAATCGACAAATTCCTA 57.350 36.000 0.00 0.00 0.00 2.94
2438 7829 7.713750 TCTACCAGTAATCGACAAATTCCTAG 58.286 38.462 0.00 0.00 0.00 3.02
2439 7830 6.540438 ACCAGTAATCGACAAATTCCTAGA 57.460 37.500 0.00 0.00 0.00 2.43
2440 7831 6.942976 ACCAGTAATCGACAAATTCCTAGAA 58.057 36.000 0.00 0.00 0.00 2.10
2441 7832 7.565680 ACCAGTAATCGACAAATTCCTAGAAT 58.434 34.615 0.00 0.00 0.00 2.40
2442 7833 7.711339 ACCAGTAATCGACAAATTCCTAGAATC 59.289 37.037 0.00 0.00 0.00 2.52
2443 7834 7.710907 CCAGTAATCGACAAATTCCTAGAATCA 59.289 37.037 0.00 0.00 0.00 2.57
2444 7835 9.098355 CAGTAATCGACAAATTCCTAGAATCAA 57.902 33.333 0.00 0.00 0.00 2.57
2445 7836 9.319143 AGTAATCGACAAATTCCTAGAATCAAG 57.681 33.333 0.00 0.00 0.00 3.02
2446 7837 9.314321 GTAATCGACAAATTCCTAGAATCAAGA 57.686 33.333 0.00 0.00 0.00 3.02
2447 7838 7.778470 ATCGACAAATTCCTAGAATCAAGAC 57.222 36.000 0.00 0.00 0.00 3.01
2448 7839 6.106673 TCGACAAATTCCTAGAATCAAGACC 58.893 40.000 0.00 0.00 0.00 3.85
2449 7840 5.005779 CGACAAATTCCTAGAATCAAGACCG 59.994 44.000 0.00 0.00 0.00 4.79
2450 7841 4.636206 ACAAATTCCTAGAATCAAGACCGC 59.364 41.667 0.00 0.00 0.00 5.68
2451 7842 2.981859 TTCCTAGAATCAAGACCGCC 57.018 50.000 0.00 0.00 0.00 6.13
2452 7843 1.120530 TCCTAGAATCAAGACCGCCC 58.879 55.000 0.00 0.00 0.00 6.13
2453 7844 0.249489 CCTAGAATCAAGACCGCCCG 60.249 60.000 0.00 0.00 0.00 6.13
2454 7845 0.876342 CTAGAATCAAGACCGCCCGC 60.876 60.000 0.00 0.00 0.00 6.13
2455 7846 1.327690 TAGAATCAAGACCGCCCGCT 61.328 55.000 0.00 0.00 0.00 5.52
2456 7847 2.436646 AATCAAGACCGCCCGCTG 60.437 61.111 0.00 0.00 0.00 5.18
2457 7848 3.254024 AATCAAGACCGCCCGCTGT 62.254 57.895 0.00 0.00 0.00 4.40
2458 7849 1.895020 AATCAAGACCGCCCGCTGTA 61.895 55.000 0.00 0.00 0.00 2.74
2459 7850 2.573609 ATCAAGACCGCCCGCTGTAC 62.574 60.000 0.00 0.00 0.00 2.90
2460 7851 4.078516 AAGACCGCCCGCTGTACC 62.079 66.667 0.00 0.00 0.00 3.34
2462 7853 4.814294 GACCGCCCGCTGTACCAG 62.814 72.222 0.00 0.00 34.12 4.00
2464 7855 4.388499 CCGCCCGCTGTACCAGTT 62.388 66.667 0.00 0.00 33.43 3.16
2465 7856 2.358247 CGCCCGCTGTACCAGTTT 60.358 61.111 0.00 0.00 33.43 2.66
2466 7857 2.677003 CGCCCGCTGTACCAGTTTG 61.677 63.158 0.00 0.00 33.43 2.93
2467 7858 2.978018 GCCCGCTGTACCAGTTTGC 61.978 63.158 0.00 0.00 33.43 3.68
2468 7859 2.332654 CCCGCTGTACCAGTTTGCC 61.333 63.158 0.00 0.00 33.43 4.52
2469 7860 2.332654 CCGCTGTACCAGTTTGCCC 61.333 63.158 0.00 0.00 33.43 5.36
2470 7861 2.677003 CGCTGTACCAGTTTGCCCG 61.677 63.158 0.00 0.00 33.43 6.13
2471 7862 2.332654 GCTGTACCAGTTTGCCCGG 61.333 63.158 0.00 0.00 33.43 5.73
2472 7863 1.072505 CTGTACCAGTTTGCCCGGT 59.927 57.895 0.00 0.00 36.79 5.28
2473 7864 0.953960 CTGTACCAGTTTGCCCGGTC 60.954 60.000 0.00 0.00 34.12 4.79
2474 7865 1.071814 GTACCAGTTTGCCCGGTCA 59.928 57.895 0.00 0.00 34.12 4.02
2475 7866 0.322187 GTACCAGTTTGCCCGGTCAT 60.322 55.000 0.00 0.00 34.12 3.06
2476 7867 0.402504 TACCAGTTTGCCCGGTCATT 59.597 50.000 0.00 0.00 34.12 2.57
2477 7868 0.469144 ACCAGTTTGCCCGGTCATTT 60.469 50.000 0.00 0.00 0.00 2.32
2478 7869 0.678950 CCAGTTTGCCCGGTCATTTT 59.321 50.000 0.00 0.00 0.00 1.82
2479 7870 1.069978 CCAGTTTGCCCGGTCATTTTT 59.930 47.619 0.00 0.00 0.00 1.94
2480 7871 2.297597 CCAGTTTGCCCGGTCATTTTTA 59.702 45.455 0.00 0.00 0.00 1.52
2481 7872 3.574614 CAGTTTGCCCGGTCATTTTTAG 58.425 45.455 0.00 0.00 0.00 1.85
2482 7873 3.005367 CAGTTTGCCCGGTCATTTTTAGT 59.995 43.478 0.00 0.00 0.00 2.24
2483 7874 3.639561 AGTTTGCCCGGTCATTTTTAGTT 59.360 39.130 0.00 0.00 0.00 2.24
2484 7875 3.651803 TTGCCCGGTCATTTTTAGTTG 57.348 42.857 0.00 0.00 0.00 3.16
2485 7876 1.271102 TGCCCGGTCATTTTTAGTTGC 59.729 47.619 0.00 0.00 0.00 4.17
2486 7877 1.403647 GCCCGGTCATTTTTAGTTGCC 60.404 52.381 0.00 0.00 0.00 4.52
2487 7878 2.167662 CCCGGTCATTTTTAGTTGCCT 58.832 47.619 0.00 0.00 0.00 4.75
2488 7879 3.349022 CCCGGTCATTTTTAGTTGCCTA 58.651 45.455 0.00 0.00 0.00 3.93
2489 7880 3.128068 CCCGGTCATTTTTAGTTGCCTAC 59.872 47.826 0.00 0.00 0.00 3.18
2490 7881 4.007659 CCGGTCATTTTTAGTTGCCTACT 58.992 43.478 0.00 0.00 41.04 2.57
2491 7882 5.180271 CCGGTCATTTTTAGTTGCCTACTA 58.820 41.667 0.00 0.00 38.33 1.82
2492 7883 5.293569 CCGGTCATTTTTAGTTGCCTACTAG 59.706 44.000 0.00 0.00 40.35 2.57
2493 7884 6.103997 CGGTCATTTTTAGTTGCCTACTAGA 58.896 40.000 0.00 0.00 40.35 2.43
2494 7885 6.255887 CGGTCATTTTTAGTTGCCTACTAGAG 59.744 42.308 0.00 0.00 40.35 2.43
2495 7886 7.328737 GGTCATTTTTAGTTGCCTACTAGAGA 58.671 38.462 0.00 0.00 40.35 3.10
2496 7887 7.492994 GGTCATTTTTAGTTGCCTACTAGAGAG 59.507 40.741 0.00 0.00 40.35 3.20
2497 7888 7.492994 GTCATTTTTAGTTGCCTACTAGAGAGG 59.507 40.741 10.16 10.16 40.35 3.69
2498 7889 7.399191 TCATTTTTAGTTGCCTACTAGAGAGGA 59.601 37.037 16.67 2.85 40.35 3.71
2499 7890 7.549147 TTTTTAGTTGCCTACTAGAGAGGAA 57.451 36.000 16.67 5.95 40.35 3.36
2500 7891 7.549147 TTTTAGTTGCCTACTAGAGAGGAAA 57.451 36.000 16.67 11.04 40.35 3.13
2501 7892 7.549147 TTTAGTTGCCTACTAGAGAGGAAAA 57.451 36.000 16.67 8.86 40.35 2.29
2502 7893 7.549147 TTAGTTGCCTACTAGAGAGGAAAAA 57.451 36.000 16.67 4.98 40.35 1.94
2503 7894 5.795972 AGTTGCCTACTAGAGAGGAAAAAC 58.204 41.667 16.67 15.24 33.10 2.43
2504 7895 5.544562 AGTTGCCTACTAGAGAGGAAAAACT 59.455 40.000 16.67 16.63 33.10 2.66
2505 7896 6.724905 AGTTGCCTACTAGAGAGGAAAAACTA 59.275 38.462 16.67 0.00 33.10 2.24
2506 7897 7.234988 AGTTGCCTACTAGAGAGGAAAAACTAA 59.765 37.037 16.67 0.00 33.10 2.24
2507 7898 7.171630 TGCCTACTAGAGAGGAAAAACTAAG 57.828 40.000 16.67 0.00 35.99 2.18
2508 7899 6.952358 TGCCTACTAGAGAGGAAAAACTAAGA 59.048 38.462 16.67 0.00 35.99 2.10
2509 7900 7.620094 TGCCTACTAGAGAGGAAAAACTAAGAT 59.380 37.037 16.67 0.00 35.99 2.40
2510 7901 7.923878 GCCTACTAGAGAGGAAAAACTAAGATG 59.076 40.741 16.67 0.00 35.99 2.90
2511 7902 8.417884 CCTACTAGAGAGGAAAAACTAAGATGG 58.582 40.741 9.16 0.00 35.99 3.51
2512 7903 7.800300 ACTAGAGAGGAAAAACTAAGATGGT 57.200 36.000 0.00 0.00 0.00 3.55
2513 7904 7.616313 ACTAGAGAGGAAAAACTAAGATGGTG 58.384 38.462 0.00 0.00 0.00 4.17
2514 7905 6.688073 AGAGAGGAAAAACTAAGATGGTGA 57.312 37.500 0.00 0.00 0.00 4.02
2515 7906 7.079451 AGAGAGGAAAAACTAAGATGGTGAA 57.921 36.000 0.00 0.00 0.00 3.18
2516 7907 7.694093 AGAGAGGAAAAACTAAGATGGTGAAT 58.306 34.615 0.00 0.00 0.00 2.57
2517 7908 8.166726 AGAGAGGAAAAACTAAGATGGTGAATT 58.833 33.333 0.00 0.00 0.00 2.17
2518 7909 9.449719 GAGAGGAAAAACTAAGATGGTGAATTA 57.550 33.333 0.00 0.00 0.00 1.40
2519 7910 9.454859 AGAGGAAAAACTAAGATGGTGAATTAG 57.545 33.333 0.00 0.00 33.63 1.73
2520 7911 9.232473 GAGGAAAAACTAAGATGGTGAATTAGT 57.768 33.333 0.00 0.00 40.55 2.24
2521 7912 9.014297 AGGAAAAACTAAGATGGTGAATTAGTG 57.986 33.333 0.00 0.00 39.17 2.74
2522 7913 9.010029 GGAAAAACTAAGATGGTGAATTAGTGA 57.990 33.333 0.00 0.00 39.17 3.41
2525 7916 7.596749 AACTAAGATGGTGAATTAGTGAACG 57.403 36.000 0.00 0.00 39.17 3.95
2526 7917 6.931838 ACTAAGATGGTGAATTAGTGAACGA 58.068 36.000 0.00 0.00 38.11 3.85
2527 7918 7.036220 ACTAAGATGGTGAATTAGTGAACGAG 58.964 38.462 0.00 0.00 38.11 4.18
2528 7919 5.407407 AGATGGTGAATTAGTGAACGAGT 57.593 39.130 0.00 0.00 0.00 4.18
2529 7920 5.411781 AGATGGTGAATTAGTGAACGAGTC 58.588 41.667 0.00 0.00 0.00 3.36
2530 7921 4.866508 TGGTGAATTAGTGAACGAGTCT 57.133 40.909 0.00 0.00 0.00 3.24
2531 7922 5.209818 TGGTGAATTAGTGAACGAGTCTT 57.790 39.130 0.00 0.00 0.00 3.01
2532 7923 5.607477 TGGTGAATTAGTGAACGAGTCTTT 58.393 37.500 0.00 0.00 0.00 2.52
2533 7924 5.694910 TGGTGAATTAGTGAACGAGTCTTTC 59.305 40.000 2.48 2.48 0.00 2.62
2534 7925 5.927115 GGTGAATTAGTGAACGAGTCTTTCT 59.073 40.000 10.39 0.00 0.00 2.52
2535 7926 6.089685 GGTGAATTAGTGAACGAGTCTTTCTC 59.910 42.308 10.39 7.05 39.62 2.87
2536 7927 6.089685 GTGAATTAGTGAACGAGTCTTTCTCC 59.910 42.308 10.39 2.18 39.84 3.71
2537 7928 5.723672 ATTAGTGAACGAGTCTTTCTCCA 57.276 39.130 10.39 0.00 39.84 3.86
2538 7929 5.723672 TTAGTGAACGAGTCTTTCTCCAT 57.276 39.130 10.39 0.00 39.84 3.41
2539 7930 4.608948 AGTGAACGAGTCTTTCTCCATT 57.391 40.909 10.39 0.00 39.84 3.16
2540 7931 4.962155 AGTGAACGAGTCTTTCTCCATTT 58.038 39.130 10.39 0.00 39.84 2.32
2541 7932 4.752101 AGTGAACGAGTCTTTCTCCATTTG 59.248 41.667 10.39 0.00 39.84 2.32
2542 7933 4.750098 GTGAACGAGTCTTTCTCCATTTGA 59.250 41.667 10.39 0.00 39.84 2.69
2543 7934 4.750098 TGAACGAGTCTTTCTCCATTTGAC 59.250 41.667 10.39 0.00 39.84 3.18
2544 7935 3.665190 ACGAGTCTTTCTCCATTTGACC 58.335 45.455 0.00 0.00 39.84 4.02
2545 7936 3.071023 ACGAGTCTTTCTCCATTTGACCA 59.929 43.478 0.00 0.00 39.84 4.02
2546 7937 4.256920 CGAGTCTTTCTCCATTTGACCAT 58.743 43.478 0.00 0.00 39.84 3.55
2547 7938 4.093998 CGAGTCTTTCTCCATTTGACCATG 59.906 45.833 0.00 0.00 39.84 3.66
2548 7939 5.246981 AGTCTTTCTCCATTTGACCATGA 57.753 39.130 0.00 0.00 0.00 3.07
2549 7940 5.006386 AGTCTTTCTCCATTTGACCATGAC 58.994 41.667 0.00 0.00 0.00 3.06
2550 7941 4.002982 TCTTTCTCCATTTGACCATGACG 58.997 43.478 0.00 0.00 0.00 4.35
2551 7942 3.694043 TTCTCCATTTGACCATGACGA 57.306 42.857 0.00 0.00 0.00 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.373226 GACACGTCCAGGGCTACA 58.627 61.111 0.00 0.00 0.00 2.74
29 30 4.404507 AAATGGAACGTCTCAAATGTCG 57.595 40.909 0.00 0.00 0.00 4.35
42 43 6.828785 TCTCCAAGGCTATCTTTAAATGGAAC 59.171 38.462 4.85 0.00 32.41 3.62
43 44 6.969043 TCTCCAAGGCTATCTTTAAATGGAA 58.031 36.000 4.85 0.00 32.41 3.53
45 46 6.774656 ACATCTCCAAGGCTATCTTTAAATGG 59.225 38.462 0.00 0.00 32.41 3.16
47 48 7.001073 GGACATCTCCAAGGCTATCTTTAAAT 58.999 38.462 0.00 0.00 36.42 1.40
78 79 8.894768 AATATGACTTTTGTGGTATCTCTAGC 57.105 34.615 0.00 0.00 0.00 3.42
87 88 5.719563 CCCCCTTAAATATGACTTTTGTGGT 59.280 40.000 0.00 0.00 0.00 4.16
159 175 8.745590 TGCCTTTTTGGGATAAAAGACTATAAC 58.254 33.333 9.70 0.00 44.22 1.89
167 183 4.615588 TGGTGCCTTTTTGGGATAAAAG 57.384 40.909 0.00 0.00 42.21 2.27
192 208 3.057245 CCTTCTTGGAGCAAAAACTAGCC 60.057 47.826 0.00 0.00 38.35 3.93
241 257 4.096003 GCCAAGAGGGGTAGCGCA 62.096 66.667 11.47 0.00 37.04 6.09
247 263 1.690985 GCTAGAGGCCAAGAGGGGT 60.691 63.158 5.01 0.00 37.04 4.95
282 298 0.526662 GACTGATTCCGACGTCCAGT 59.473 55.000 19.95 19.95 40.37 4.00
315 331 1.683441 GGTGGTAGGGTTGTGGGAG 59.317 63.158 0.00 0.00 0.00 4.30
323 339 1.082392 GAGAAGGGGGTGGTAGGGT 59.918 63.158 0.00 0.00 0.00 4.34
345 361 1.902938 TGATTTTGGCACCATCGACA 58.097 45.000 0.00 0.00 0.00 4.35
374 390 2.719739 CTCTGTGGAGATGTTGGCAAT 58.280 47.619 1.92 0.00 41.86 3.56
380 396 3.777106 TTGAAGCTCTGTGGAGATGTT 57.223 42.857 0.00 0.00 41.86 2.71
387 403 1.271543 TGTGGGATTGAAGCTCTGTGG 60.272 52.381 0.00 0.00 0.00 4.17
392 408 2.165030 CACCATTGTGGGATTGAAGCTC 59.835 50.000 0.52 0.00 43.37 4.09
400 416 1.217057 AGGGCTCACCATTGTGGGAT 61.217 55.000 0.00 0.00 46.55 3.85
404 420 1.100510 CATCAGGGCTCACCATTGTG 58.899 55.000 0.00 0.00 43.89 3.33
405 421 0.700564 ACATCAGGGCTCACCATTGT 59.299 50.000 0.00 0.00 43.89 2.71
407 423 0.033796 CCACATCAGGGCTCACCATT 60.034 55.000 0.00 0.00 43.89 3.16
508 524 0.687354 ACGATGGCAGTGAAGAAGGT 59.313 50.000 0.00 0.00 0.00 3.50
531 547 0.882042 CAAGAATGGCGGGGAGATCG 60.882 60.000 0.00 0.00 0.00 3.69
548 564 1.078918 CTCATGGCCGAGCTGACAA 60.079 57.895 0.00 0.00 0.00 3.18
621 637 2.254546 ATTTGCCGGCAGATTCGATA 57.745 45.000 30.75 9.52 0.00 2.92
634 650 0.741927 ACGGCGGTGTACTATTTGCC 60.742 55.000 13.24 0.00 39.10 4.52
635 651 1.081094 AACGGCGGTGTACTATTTGC 58.919 50.000 13.24 0.00 0.00 3.68
668 684 3.055891 GGTGTTATGCCTTGCCAGATTTT 60.056 43.478 0.00 0.00 0.00 1.82
690 706 5.069251 ACACTTCCTATATCTCTCGGGTTTG 59.931 44.000 0.00 0.00 0.00 2.93
697 713 6.096282 GCCAGGATACACTTCCTATATCTCTC 59.904 46.154 0.00 0.00 44.54 3.20
698 714 5.955355 GCCAGGATACACTTCCTATATCTCT 59.045 44.000 0.00 0.00 44.54 3.10
699 715 5.717178 TGCCAGGATACACTTCCTATATCTC 59.283 44.000 0.00 0.00 44.54 2.75
700 716 5.655394 TGCCAGGATACACTTCCTATATCT 58.345 41.667 0.00 0.00 44.54 1.98
701 717 6.552445 ATGCCAGGATACACTTCCTATATC 57.448 41.667 0.00 0.00 44.54 1.63
710 2067 5.636903 AATGAGTTATGCCAGGATACACT 57.363 39.130 0.00 0.00 41.41 3.55
715 2072 4.079558 AGGACAAATGAGTTATGCCAGGAT 60.080 41.667 0.00 0.00 0.00 3.24
716 2073 3.266772 AGGACAAATGAGTTATGCCAGGA 59.733 43.478 0.00 0.00 0.00 3.86
717 2074 3.624777 AGGACAAATGAGTTATGCCAGG 58.375 45.455 0.00 0.00 0.00 4.45
718 2075 4.095483 GTGAGGACAAATGAGTTATGCCAG 59.905 45.833 0.00 0.00 0.00 4.85
720 2077 4.265073 AGTGAGGACAAATGAGTTATGCC 58.735 43.478 0.00 0.00 0.00 4.40
721 2078 5.886960 AAGTGAGGACAAATGAGTTATGC 57.113 39.130 0.00 0.00 0.00 3.14
751 2558 4.411256 ACTGACCTTCCTTTCGTAACAA 57.589 40.909 0.00 0.00 0.00 2.83
752 2559 4.124238 CAACTGACCTTCCTTTCGTAACA 58.876 43.478 0.00 0.00 0.00 2.41
767 2574 7.783042 ACTTCCTATATTGTACTCCAACTGAC 58.217 38.462 0.00 0.00 35.44 3.51
768 2575 7.618117 TGACTTCCTATATTGTACTCCAACTGA 59.382 37.037 0.00 0.00 35.44 3.41
769 2576 7.707035 GTGACTTCCTATATTGTACTCCAACTG 59.293 40.741 0.00 0.00 35.44 3.16
770 2577 7.416438 CGTGACTTCCTATATTGTACTCCAACT 60.416 40.741 0.00 0.00 35.44 3.16
771 2578 6.696148 CGTGACTTCCTATATTGTACTCCAAC 59.304 42.308 0.00 0.00 35.44 3.77
772 2579 6.183360 CCGTGACTTCCTATATTGTACTCCAA 60.183 42.308 0.00 0.00 37.49 3.53
775 2587 5.009811 AGCCGTGACTTCCTATATTGTACTC 59.990 44.000 0.00 0.00 0.00 2.59
777 2589 5.197682 AGCCGTGACTTCCTATATTGTAC 57.802 43.478 0.00 0.00 0.00 2.90
781 2593 4.900054 AGGTTAGCCGTGACTTCCTATATT 59.100 41.667 0.00 0.00 40.50 1.28
785 2597 1.822990 CAGGTTAGCCGTGACTTCCTA 59.177 52.381 0.00 0.00 40.50 2.94
838 2668 3.418675 TGAAGCGTTCATCTCCGAC 57.581 52.632 0.00 0.00 34.08 4.79
866 2698 1.566018 GCGTCAGTTTGGACTTCCGG 61.566 60.000 0.00 0.00 39.43 5.14
868 2700 1.464997 GATGCGTCAGTTTGGACTTCC 59.535 52.381 0.00 0.00 35.63 3.46
934 2769 7.225931 GGAATTGACGTGCTTATATAGGACAAA 59.774 37.037 0.00 0.00 44.78 2.83
1005 2842 2.158842 GGAAGGAGACATGGTCATCTGG 60.159 54.545 0.00 0.00 34.60 3.86
1585 3446 6.532302 GCATCATGCATTATTTGAACAGACAA 59.468 34.615 4.20 0.00 44.26 3.18
1644 3514 7.979537 GTGTAATCCAAATTCCCCATTTCTTAC 59.020 37.037 0.00 0.00 32.24 2.34
1810 7170 4.651778 TGGTGTGGGTTTTCTAAGATGAG 58.348 43.478 0.00 0.00 0.00 2.90
1819 7189 1.886542 CTTAGCCTGGTGTGGGTTTTC 59.113 52.381 0.00 0.00 38.86 2.29
1820 7190 1.497286 TCTTAGCCTGGTGTGGGTTTT 59.503 47.619 0.00 0.00 38.86 2.43
1821 7191 1.145571 TCTTAGCCTGGTGTGGGTTT 58.854 50.000 0.00 0.00 38.86 3.27
1822 7192 1.145571 TTCTTAGCCTGGTGTGGGTT 58.854 50.000 0.00 0.00 38.86 4.11
1823 7193 0.400594 GTTCTTAGCCTGGTGTGGGT 59.599 55.000 0.00 0.00 41.20 4.51
1824 7194 0.693049 AGTTCTTAGCCTGGTGTGGG 59.307 55.000 0.00 0.00 0.00 4.61
1825 7195 1.347707 TGAGTTCTTAGCCTGGTGTGG 59.652 52.381 0.00 0.00 0.00 4.17
1826 7196 2.037772 AGTGAGTTCTTAGCCTGGTGTG 59.962 50.000 0.00 0.00 0.00 3.82
1827 7197 2.330216 AGTGAGTTCTTAGCCTGGTGT 58.670 47.619 0.00 0.00 0.00 4.16
1914 7284 0.313672 GCTTCATCAAACCAACGGCA 59.686 50.000 0.00 0.00 0.00 5.69
1931 7301 2.031683 CGTCAAAACTTTCAACTCCGCT 59.968 45.455 0.00 0.00 0.00 5.52
2003 7374 7.467557 AACATTTTCAGTGCAATGTTACTTG 57.532 32.000 22.22 9.19 46.85 3.16
2033 7413 6.544564 TGTGATACGATTAGTACTCCACATGA 59.455 38.462 0.00 0.00 37.94 3.07
2112 7499 3.173151 TGGTACATCTGCCTCTCTTGAA 58.827 45.455 0.00 0.00 0.00 2.69
2120 7507 1.614317 GGCAAACTGGTACATCTGCCT 60.614 52.381 13.41 0.00 46.79 4.75
2121 7508 0.811281 GGCAAACTGGTACATCTGCC 59.189 55.000 7.61 7.61 45.32 4.85
2193 7584 3.423539 TGGTCAAATGGAGAAGGACTG 57.576 47.619 0.00 0.00 0.00 3.51
2194 7585 3.960571 CATGGTCAAATGGAGAAGGACT 58.039 45.455 0.00 0.00 0.00 3.85
2216 7607 1.126113 CGCACGGAGTAACAACATCAC 59.874 52.381 0.00 0.00 41.61 3.06
2236 7627 0.823356 TTGCAAAGCTCTGGTGTCCC 60.823 55.000 0.00 0.00 0.00 4.46
2284 7675 6.575244 TTTGAAGGATACCCATAGACATGT 57.425 37.500 0.00 0.00 33.88 3.21
2301 7692 4.276058 AGCATTTCCCAACCATTTGAAG 57.724 40.909 0.00 0.00 34.24 3.02
2302 7693 4.141528 ACAAGCATTTCCCAACCATTTGAA 60.142 37.500 0.00 0.00 34.24 2.69
2303 7694 3.390639 ACAAGCATTTCCCAACCATTTGA 59.609 39.130 0.00 0.00 34.24 2.69
2304 7695 3.742385 ACAAGCATTTCCCAACCATTTG 58.258 40.909 0.00 0.00 0.00 2.32
2305 7696 4.436113 AACAAGCATTTCCCAACCATTT 57.564 36.364 0.00 0.00 0.00 2.32
2306 7697 5.760484 ATAACAAGCATTTCCCAACCATT 57.240 34.783 0.00 0.00 0.00 3.16
2307 7698 5.760484 AATAACAAGCATTTCCCAACCAT 57.240 34.783 0.00 0.00 0.00 3.55
2308 7699 6.459923 GTTAATAACAAGCATTTCCCAACCA 58.540 36.000 0.00 0.00 0.00 3.67
2309 7700 5.575218 CGTTAATAACAAGCATTTCCCAACC 59.425 40.000 3.91 0.00 0.00 3.77
2310 7701 6.153756 ACGTTAATAACAAGCATTTCCCAAC 58.846 36.000 3.91 0.00 0.00 3.77
2311 7702 6.334102 ACGTTAATAACAAGCATTTCCCAA 57.666 33.333 3.91 0.00 0.00 4.12
2312 7703 5.968528 ACGTTAATAACAAGCATTTCCCA 57.031 34.783 3.91 0.00 0.00 4.37
2313 7704 6.153756 ACAACGTTAATAACAAGCATTTCCC 58.846 36.000 0.00 0.00 0.00 3.97
2314 7705 7.804129 TGTACAACGTTAATAACAAGCATTTCC 59.196 33.333 0.00 0.00 0.00 3.13
2315 7706 8.716619 TGTACAACGTTAATAACAAGCATTTC 57.283 30.769 0.00 0.00 0.00 2.17
2316 7707 8.561212 TCTGTACAACGTTAATAACAAGCATTT 58.439 29.630 0.00 0.00 0.00 2.32
2317 7708 8.090250 TCTGTACAACGTTAATAACAAGCATT 57.910 30.769 0.00 0.00 0.00 3.56
2318 7709 7.661127 TCTGTACAACGTTAATAACAAGCAT 57.339 32.000 0.00 0.00 0.00 3.79
2319 7710 7.479897 TTCTGTACAACGTTAATAACAAGCA 57.520 32.000 0.00 0.00 0.00 3.91
2320 7711 8.770850 TTTTCTGTACAACGTTAATAACAAGC 57.229 30.769 0.00 0.00 0.00 4.01
2350 7741 9.225436 TGATTAGTACTGCACATGTCAATAAAA 57.775 29.630 5.39 0.00 0.00 1.52
2351 7742 8.785329 TGATTAGTACTGCACATGTCAATAAA 57.215 30.769 5.39 0.00 0.00 1.40
2352 7743 8.962884 ATGATTAGTACTGCACATGTCAATAA 57.037 30.769 5.39 0.00 0.00 1.40
2354 7745 9.212641 GATATGATTAGTACTGCACATGTCAAT 57.787 33.333 19.15 5.94 0.00 2.57
2355 7746 7.657354 GGATATGATTAGTACTGCACATGTCAA 59.343 37.037 22.26 4.91 31.17 3.18
2356 7747 7.154656 GGATATGATTAGTACTGCACATGTCA 58.845 38.462 22.26 11.68 31.17 3.58
2357 7748 6.591834 GGGATATGATTAGTACTGCACATGTC 59.408 42.308 5.39 13.78 0.00 3.06
2358 7749 6.043127 TGGGATATGATTAGTACTGCACATGT 59.957 38.462 5.39 6.34 0.00 3.21
2359 7750 6.369890 GTGGGATATGATTAGTACTGCACATG 59.630 42.308 5.39 0.00 0.00 3.21
2360 7751 6.467677 GTGGGATATGATTAGTACTGCACAT 58.532 40.000 5.39 10.11 0.00 3.21
2361 7752 5.221641 GGTGGGATATGATTAGTACTGCACA 60.222 44.000 5.39 3.00 0.00 4.57
2362 7753 5.012148 AGGTGGGATATGATTAGTACTGCAC 59.988 44.000 5.39 0.00 0.00 4.57
2363 7754 5.155161 AGGTGGGATATGATTAGTACTGCA 58.845 41.667 5.39 1.37 0.00 4.41
2364 7755 5.746990 AGGTGGGATATGATTAGTACTGC 57.253 43.478 5.39 0.00 0.00 4.40
2365 7756 7.445402 CCAAAAGGTGGGATATGATTAGTACTG 59.555 40.741 5.39 0.00 44.64 2.74
2366 7757 7.518188 CCAAAAGGTGGGATATGATTAGTACT 58.482 38.462 0.00 0.00 44.64 2.73
2367 7758 7.745620 CCAAAAGGTGGGATATGATTAGTAC 57.254 40.000 0.00 0.00 44.64 2.73
2384 7775 4.993029 TTGTTGAAGTGTACCCAAAAGG 57.007 40.909 0.00 0.00 43.78 3.11
2385 7776 5.068460 TGGATTGTTGAAGTGTACCCAAAAG 59.932 40.000 0.00 0.00 0.00 2.27
2386 7777 4.956700 TGGATTGTTGAAGTGTACCCAAAA 59.043 37.500 0.00 0.00 0.00 2.44
2387 7778 4.339814 GTGGATTGTTGAAGTGTACCCAAA 59.660 41.667 0.00 0.00 0.00 3.28
2388 7779 3.886505 GTGGATTGTTGAAGTGTACCCAA 59.113 43.478 0.00 0.00 0.00 4.12
2389 7780 3.137544 AGTGGATTGTTGAAGTGTACCCA 59.862 43.478 0.00 0.00 0.00 4.51
2390 7781 3.751518 AGTGGATTGTTGAAGTGTACCC 58.248 45.455 0.00 0.00 0.00 3.69
2391 7782 6.407202 AGATAGTGGATTGTTGAAGTGTACC 58.593 40.000 0.00 0.00 0.00 3.34
2392 7783 7.491696 GGTAGATAGTGGATTGTTGAAGTGTAC 59.508 40.741 0.00 0.00 0.00 2.90
2393 7784 7.179516 TGGTAGATAGTGGATTGTTGAAGTGTA 59.820 37.037 0.00 0.00 0.00 2.90
2394 7785 6.013725 TGGTAGATAGTGGATTGTTGAAGTGT 60.014 38.462 0.00 0.00 0.00 3.55
2395 7786 6.406370 TGGTAGATAGTGGATTGTTGAAGTG 58.594 40.000 0.00 0.00 0.00 3.16
2396 7787 6.213600 ACTGGTAGATAGTGGATTGTTGAAGT 59.786 38.462 0.00 0.00 0.00 3.01
2397 7788 6.644347 ACTGGTAGATAGTGGATTGTTGAAG 58.356 40.000 0.00 0.00 0.00 3.02
2398 7789 6.620877 ACTGGTAGATAGTGGATTGTTGAA 57.379 37.500 0.00 0.00 0.00 2.69
2399 7790 7.727578 TTACTGGTAGATAGTGGATTGTTGA 57.272 36.000 0.00 0.00 0.00 3.18
2400 7791 7.382488 CGATTACTGGTAGATAGTGGATTGTTG 59.618 40.741 0.00 0.00 0.00 3.33
2401 7792 7.287005 TCGATTACTGGTAGATAGTGGATTGTT 59.713 37.037 0.00 0.00 0.00 2.83
2402 7793 6.776116 TCGATTACTGGTAGATAGTGGATTGT 59.224 38.462 0.00 0.00 0.00 2.71
2403 7794 7.085116 GTCGATTACTGGTAGATAGTGGATTG 58.915 42.308 0.00 0.00 0.00 2.67
2404 7795 6.776116 TGTCGATTACTGGTAGATAGTGGATT 59.224 38.462 0.00 0.00 0.00 3.01
2405 7796 6.304624 TGTCGATTACTGGTAGATAGTGGAT 58.695 40.000 0.00 0.00 0.00 3.41
2406 7797 5.687780 TGTCGATTACTGGTAGATAGTGGA 58.312 41.667 0.00 0.00 0.00 4.02
2407 7798 6.387041 TTGTCGATTACTGGTAGATAGTGG 57.613 41.667 0.00 0.00 0.00 4.00
2408 7799 8.873215 AATTTGTCGATTACTGGTAGATAGTG 57.127 34.615 0.00 0.00 0.00 2.74
2409 7800 8.142551 GGAATTTGTCGATTACTGGTAGATAGT 58.857 37.037 0.00 0.00 0.00 2.12
2410 7801 8.361139 AGGAATTTGTCGATTACTGGTAGATAG 58.639 37.037 0.00 0.00 28.98 2.08
2411 7802 8.246430 AGGAATTTGTCGATTACTGGTAGATA 57.754 34.615 0.00 0.00 28.98 1.98
2412 7803 7.125792 AGGAATTTGTCGATTACTGGTAGAT 57.874 36.000 0.00 0.00 28.98 1.98
2413 7804 6.540438 AGGAATTTGTCGATTACTGGTAGA 57.460 37.500 0.00 0.00 28.98 2.59
2414 7805 7.713750 TCTAGGAATTTGTCGATTACTGGTAG 58.286 38.462 0.00 0.00 32.12 3.18
2415 7806 7.649533 TCTAGGAATTTGTCGATTACTGGTA 57.350 36.000 0.00 0.00 32.12 3.25
2416 7807 6.540438 TCTAGGAATTTGTCGATTACTGGT 57.460 37.500 0.00 0.00 32.12 4.00
2417 7808 7.710907 TGATTCTAGGAATTTGTCGATTACTGG 59.289 37.037 0.00 0.00 32.50 4.00
2418 7809 8.648557 TGATTCTAGGAATTTGTCGATTACTG 57.351 34.615 0.00 0.00 32.50 2.74
2419 7810 9.319143 CTTGATTCTAGGAATTTGTCGATTACT 57.681 33.333 0.00 0.00 34.58 2.24
2420 7811 9.314321 TCTTGATTCTAGGAATTTGTCGATTAC 57.686 33.333 0.00 0.00 0.00 1.89
2421 7812 9.314321 GTCTTGATTCTAGGAATTTGTCGATTA 57.686 33.333 0.00 0.00 0.00 1.75
2422 7813 7.281100 GGTCTTGATTCTAGGAATTTGTCGATT 59.719 37.037 0.00 0.00 0.00 3.34
2423 7814 6.763610 GGTCTTGATTCTAGGAATTTGTCGAT 59.236 38.462 0.00 0.00 0.00 3.59
2424 7815 6.106673 GGTCTTGATTCTAGGAATTTGTCGA 58.893 40.000 0.00 0.00 0.00 4.20
2425 7816 5.005779 CGGTCTTGATTCTAGGAATTTGTCG 59.994 44.000 0.00 0.00 0.00 4.35
2426 7817 5.220681 GCGGTCTTGATTCTAGGAATTTGTC 60.221 44.000 0.00 0.00 0.00 3.18
2427 7818 4.636206 GCGGTCTTGATTCTAGGAATTTGT 59.364 41.667 0.00 0.00 0.00 2.83
2428 7819 4.035675 GGCGGTCTTGATTCTAGGAATTTG 59.964 45.833 0.00 0.00 0.00 2.32
2429 7820 4.200092 GGCGGTCTTGATTCTAGGAATTT 58.800 43.478 0.00 0.00 0.00 1.82
2430 7821 3.433740 GGGCGGTCTTGATTCTAGGAATT 60.434 47.826 0.00 0.00 0.00 2.17
2431 7822 2.104963 GGGCGGTCTTGATTCTAGGAAT 59.895 50.000 0.00 0.00 0.00 3.01
2432 7823 1.485066 GGGCGGTCTTGATTCTAGGAA 59.515 52.381 0.00 0.00 0.00 3.36
2433 7824 1.120530 GGGCGGTCTTGATTCTAGGA 58.879 55.000 0.00 0.00 0.00 2.94
2434 7825 0.249489 CGGGCGGTCTTGATTCTAGG 60.249 60.000 0.00 0.00 0.00 3.02
2435 7826 0.876342 GCGGGCGGTCTTGATTCTAG 60.876 60.000 0.00 0.00 0.00 2.43
2436 7827 1.143183 GCGGGCGGTCTTGATTCTA 59.857 57.895 0.00 0.00 0.00 2.10
2437 7828 2.125106 GCGGGCGGTCTTGATTCT 60.125 61.111 0.00 0.00 0.00 2.40
2438 7829 2.125106 AGCGGGCGGTCTTGATTC 60.125 61.111 0.00 0.00 0.00 2.52
2439 7830 1.895020 TACAGCGGGCGGTCTTGATT 61.895 55.000 0.00 0.00 0.00 2.57
2440 7831 2.355986 TACAGCGGGCGGTCTTGAT 61.356 57.895 0.00 0.00 0.00 2.57
2441 7832 2.992689 TACAGCGGGCGGTCTTGA 60.993 61.111 0.00 0.00 0.00 3.02
2442 7833 2.813908 GTACAGCGGGCGGTCTTG 60.814 66.667 0.00 0.00 0.00 3.02
2443 7834 4.078516 GGTACAGCGGGCGGTCTT 62.079 66.667 0.00 0.00 0.00 3.01
2460 7851 2.524569 AAAAATGACCGGGCAAACTG 57.475 45.000 17.77 0.00 0.00 3.16
2461 7852 3.227614 ACTAAAAATGACCGGGCAAACT 58.772 40.909 17.77 0.00 0.00 2.66
2462 7853 3.653539 ACTAAAAATGACCGGGCAAAC 57.346 42.857 17.77 0.00 0.00 2.93
2463 7854 3.800604 GCAACTAAAAATGACCGGGCAAA 60.801 43.478 17.77 0.00 0.00 3.68
2464 7855 2.288518 GCAACTAAAAATGACCGGGCAA 60.289 45.455 17.77 0.00 0.00 4.52
2465 7856 1.271102 GCAACTAAAAATGACCGGGCA 59.729 47.619 15.46 15.46 0.00 5.36
2466 7857 1.403647 GGCAACTAAAAATGACCGGGC 60.404 52.381 6.32 1.57 0.00 6.13
2467 7858 2.647529 GGCAACTAAAAATGACCGGG 57.352 50.000 6.32 0.00 0.00 5.73
2481 7872 5.795972 AGTTTTTCCTCTCTAGTAGGCAAC 58.204 41.667 8.52 10.17 33.84 4.17
2482 7873 7.453752 TCTTAGTTTTTCCTCTCTAGTAGGCAA 59.546 37.037 8.52 2.87 33.84 4.52
2483 7874 6.952358 TCTTAGTTTTTCCTCTCTAGTAGGCA 59.048 38.462 8.52 0.00 33.84 4.75
2484 7875 7.407393 TCTTAGTTTTTCCTCTCTAGTAGGC 57.593 40.000 8.52 0.00 33.84 3.93
2485 7876 8.417884 CCATCTTAGTTTTTCCTCTCTAGTAGG 58.582 40.741 7.38 7.38 35.26 3.18
2486 7877 8.973182 ACCATCTTAGTTTTTCCTCTCTAGTAG 58.027 37.037 0.00 0.00 0.00 2.57
2487 7878 8.750298 CACCATCTTAGTTTTTCCTCTCTAGTA 58.250 37.037 0.00 0.00 0.00 1.82
2488 7879 7.455008 TCACCATCTTAGTTTTTCCTCTCTAGT 59.545 37.037 0.00 0.00 0.00 2.57
2489 7880 7.841956 TCACCATCTTAGTTTTTCCTCTCTAG 58.158 38.462 0.00 0.00 0.00 2.43
2490 7881 7.792364 TCACCATCTTAGTTTTTCCTCTCTA 57.208 36.000 0.00 0.00 0.00 2.43
2491 7882 6.688073 TCACCATCTTAGTTTTTCCTCTCT 57.312 37.500 0.00 0.00 0.00 3.10
2492 7883 7.929941 ATTCACCATCTTAGTTTTTCCTCTC 57.070 36.000 0.00 0.00 0.00 3.20
2493 7884 9.454859 CTAATTCACCATCTTAGTTTTTCCTCT 57.545 33.333 0.00 0.00 0.00 3.69
2494 7885 9.232473 ACTAATTCACCATCTTAGTTTTTCCTC 57.768 33.333 0.00 0.00 33.10 3.71
2495 7886 9.014297 CACTAATTCACCATCTTAGTTTTTCCT 57.986 33.333 0.00 0.00 34.35 3.36
2496 7887 9.010029 TCACTAATTCACCATCTTAGTTTTTCC 57.990 33.333 0.00 0.00 34.35 3.13
2499 7890 8.504005 CGTTCACTAATTCACCATCTTAGTTTT 58.496 33.333 0.00 0.00 34.35 2.43
2500 7891 7.876068 TCGTTCACTAATTCACCATCTTAGTTT 59.124 33.333 0.00 0.00 34.35 2.66
2501 7892 7.383687 TCGTTCACTAATTCACCATCTTAGTT 58.616 34.615 0.00 0.00 34.35 2.24
2502 7893 6.931838 TCGTTCACTAATTCACCATCTTAGT 58.068 36.000 0.00 0.00 36.41 2.24
2503 7894 7.036220 ACTCGTTCACTAATTCACCATCTTAG 58.964 38.462 0.00 0.00 0.00 2.18
2504 7895 6.931838 ACTCGTTCACTAATTCACCATCTTA 58.068 36.000 0.00 0.00 0.00 2.10
2505 7896 5.794894 ACTCGTTCACTAATTCACCATCTT 58.205 37.500 0.00 0.00 0.00 2.40
2506 7897 5.186021 AGACTCGTTCACTAATTCACCATCT 59.814 40.000 0.00 0.00 0.00 2.90
2507 7898 5.411781 AGACTCGTTCACTAATTCACCATC 58.588 41.667 0.00 0.00 0.00 3.51
2508 7899 5.407407 AGACTCGTTCACTAATTCACCAT 57.593 39.130 0.00 0.00 0.00 3.55
2509 7900 4.866508 AGACTCGTTCACTAATTCACCA 57.133 40.909 0.00 0.00 0.00 4.17
2510 7901 5.927115 AGAAAGACTCGTTCACTAATTCACC 59.073 40.000 7.37 0.00 0.00 4.02
2511 7902 6.089685 GGAGAAAGACTCGTTCACTAATTCAC 59.910 42.308 7.37 0.00 45.76 3.18
2512 7903 6.157211 GGAGAAAGACTCGTTCACTAATTCA 58.843 40.000 7.37 0.00 45.76 2.57
2513 7904 6.157211 TGGAGAAAGACTCGTTCACTAATTC 58.843 40.000 7.37 0.00 45.76 2.17
2514 7905 6.097915 TGGAGAAAGACTCGTTCACTAATT 57.902 37.500 7.37 0.00 45.76 1.40
2515 7906 5.723672 TGGAGAAAGACTCGTTCACTAAT 57.276 39.130 7.37 0.00 45.76 1.73
2516 7907 5.723672 ATGGAGAAAGACTCGTTCACTAA 57.276 39.130 7.37 0.00 45.76 2.24
2517 7908 5.723672 AATGGAGAAAGACTCGTTCACTA 57.276 39.130 7.37 0.10 45.76 2.74
2518 7909 4.608948 AATGGAGAAAGACTCGTTCACT 57.391 40.909 7.37 0.00 45.76 3.41
2519 7910 4.750098 TCAAATGGAGAAAGACTCGTTCAC 59.250 41.667 7.37 1.36 45.76 3.18
2520 7911 4.750098 GTCAAATGGAGAAAGACTCGTTCA 59.250 41.667 7.37 0.00 45.76 3.18
2521 7912 4.152580 GGTCAAATGGAGAAAGACTCGTTC 59.847 45.833 0.00 0.00 45.76 3.95
2522 7913 4.065789 GGTCAAATGGAGAAAGACTCGTT 58.934 43.478 0.00 0.00 45.76 3.85
2523 7914 3.071023 TGGTCAAATGGAGAAAGACTCGT 59.929 43.478 0.00 0.00 45.76 4.18
2524 7915 3.664107 TGGTCAAATGGAGAAAGACTCG 58.336 45.455 0.00 0.00 45.76 4.18
2525 7916 5.123027 GTCATGGTCAAATGGAGAAAGACTC 59.877 44.000 0.00 0.00 44.24 3.36
2526 7917 5.006386 GTCATGGTCAAATGGAGAAAGACT 58.994 41.667 0.00 0.00 0.00 3.24
2527 7918 4.142816 CGTCATGGTCAAATGGAGAAAGAC 60.143 45.833 0.00 0.00 0.00 3.01
2528 7919 4.002982 CGTCATGGTCAAATGGAGAAAGA 58.997 43.478 0.00 0.00 0.00 2.52
2529 7920 4.002982 TCGTCATGGTCAAATGGAGAAAG 58.997 43.478 0.00 0.00 0.00 2.62
2530 7921 4.014569 TCGTCATGGTCAAATGGAGAAA 57.985 40.909 0.00 0.00 0.00 2.52
2531 7922 3.694043 TCGTCATGGTCAAATGGAGAA 57.306 42.857 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.