Multiple sequence alignment - TraesCS2B01G458800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G458800 | chr2B | 100.000 | 5966 | 0 | 0 | 1 | 5966 | 653599175 | 653593210 | 0.000000e+00 | 11018.0 |
1 | TraesCS2B01G458800 | chr2B | 91.139 | 158 | 7 | 7 | 683 | 838 | 137066960 | 137067112 | 2.180000e-49 | 207.0 |
2 | TraesCS2B01G458800 | chr2D | 91.434 | 3654 | 180 | 50 | 897 | 4508 | 546815349 | 546811787 | 0.000000e+00 | 4891.0 |
3 | TraesCS2B01G458800 | chr2D | 95.203 | 2543 | 81 | 11 | 916 | 3426 | 546688191 | 546685658 | 0.000000e+00 | 3982.0 |
4 | TraesCS2B01G458800 | chr2D | 94.099 | 1576 | 66 | 12 | 3439 | 5008 | 546685617 | 546684063 | 0.000000e+00 | 2370.0 |
5 | TraesCS2B01G458800 | chr2D | 94.538 | 1190 | 50 | 6 | 4505 | 5686 | 546809037 | 546807855 | 0.000000e+00 | 1823.0 |
6 | TraesCS2B01G458800 | chr2D | 88.816 | 304 | 29 | 4 | 1 | 301 | 546816148 | 546815847 | 9.450000e-98 | 368.0 |
7 | TraesCS2B01G458800 | chr2D | 86.879 | 282 | 19 | 6 | 5659 | 5939 | 546807909 | 546807645 | 3.490000e-77 | 300.0 |
8 | TraesCS2B01G458800 | chr2D | 85.043 | 234 | 21 | 7 | 5065 | 5286 | 546684064 | 546683833 | 6.020000e-55 | 226.0 |
9 | TraesCS2B01G458800 | chr2D | 86.429 | 140 | 13 | 5 | 5297 | 5435 | 546683736 | 546683602 | 1.340000e-31 | 148.0 |
10 | TraesCS2B01G458800 | chr2D | 96.970 | 33 | 1 | 0 | 5460 | 5492 | 546683597 | 546683565 | 8.350000e-04 | 56.5 |
11 | TraesCS2B01G458800 | chr2A | 89.234 | 2768 | 174 | 48 | 2586 | 5286 | 689756891 | 689759601 | 0.000000e+00 | 3347.0 |
12 | TraesCS2B01G458800 | chr2A | 91.715 | 1726 | 77 | 24 | 905 | 2601 | 689753779 | 689755467 | 0.000000e+00 | 2335.0 |
13 | TraesCS2B01G458800 | chr2A | 80.615 | 423 | 28 | 20 | 5285 | 5656 | 689759682 | 689760101 | 1.640000e-70 | 278.0 |
14 | TraesCS2B01G458800 | chr2A | 87.019 | 208 | 20 | 6 | 5686 | 5890 | 689760077 | 689760280 | 1.670000e-55 | 228.0 |
15 | TraesCS2B01G458800 | chr2A | 78.099 | 242 | 32 | 12 | 5416 | 5639 | 689803612 | 689803850 | 3.750000e-27 | 134.0 |
16 | TraesCS2B01G458800 | chr7D | 84.959 | 851 | 84 | 20 | 1429 | 2261 | 72328698 | 72329522 | 0.000000e+00 | 822.0 |
17 | TraesCS2B01G458800 | chr7D | 91.139 | 158 | 7 | 7 | 683 | 838 | 611940690 | 611940842 | 2.180000e-49 | 207.0 |
18 | TraesCS2B01G458800 | chr3A | 84.250 | 673 | 77 | 12 | 1605 | 2261 | 152724844 | 152724185 | 3.920000e-176 | 628.0 |
19 | TraesCS2B01G458800 | chr3A | 89.011 | 182 | 15 | 5 | 683 | 863 | 188567352 | 188567529 | 2.800000e-53 | 220.0 |
20 | TraesCS2B01G458800 | chr3A | 91.250 | 160 | 6 | 7 | 683 | 838 | 725037972 | 725038127 | 1.680000e-50 | 211.0 |
21 | TraesCS2B01G458800 | chr4A | 81.199 | 851 | 94 | 31 | 1429 | 2261 | 8930668 | 8929866 | 5.080000e-175 | 625.0 |
22 | TraesCS2B01G458800 | chr4A | 86.641 | 262 | 29 | 5 | 44 | 301 | 32967105 | 32966846 | 9.790000e-73 | 285.0 |
23 | TraesCS2B01G458800 | chr7B | 83.402 | 482 | 49 | 13 | 1435 | 1903 | 349588339 | 349587876 | 9.250000e-113 | 418.0 |
24 | TraesCS2B01G458800 | chr7B | 86.282 | 277 | 27 | 2 | 1573 | 1839 | 365341523 | 365341798 | 2.100000e-74 | 291.0 |
25 | TraesCS2B01G458800 | chr7B | 92.763 | 152 | 5 | 6 | 686 | 834 | 230294764 | 230294616 | 1.300000e-51 | 215.0 |
26 | TraesCS2B01G458800 | chr7B | 86.806 | 144 | 19 | 0 | 2286 | 2429 | 349587865 | 349587722 | 1.720000e-35 | 161.0 |
27 | TraesCS2B01G458800 | chr4B | 82.996 | 494 | 49 | 16 | 1435 | 1914 | 314827615 | 314827143 | 1.200000e-111 | 414.0 |
28 | TraesCS2B01G458800 | chr4B | 83.094 | 278 | 33 | 3 | 1575 | 1842 | 514540812 | 514540539 | 2.150000e-59 | 241.0 |
29 | TraesCS2B01G458800 | chr5B | 86.957 | 276 | 25 | 2 | 1577 | 1842 | 636520727 | 636521001 | 3.490000e-77 | 300.0 |
30 | TraesCS2B01G458800 | chr3B | 82.527 | 372 | 30 | 16 | 1431 | 1788 | 72706351 | 72706001 | 1.630000e-75 | 294.0 |
31 | TraesCS2B01G458800 | chr6B | 85.971 | 278 | 28 | 3 | 1575 | 1842 | 630113757 | 630113481 | 2.720000e-73 | 287.0 |
32 | TraesCS2B01G458800 | chr6B | 85.612 | 278 | 28 | 3 | 1575 | 1842 | 630079906 | 630079631 | 1.270000e-71 | 281.0 |
33 | TraesCS2B01G458800 | chr4D | 93.038 | 158 | 5 | 6 | 683 | 838 | 458888849 | 458888696 | 6.020000e-55 | 226.0 |
34 | TraesCS2B01G458800 | chr6A | 90.058 | 171 | 12 | 5 | 683 | 852 | 511140985 | 511140819 | 3.620000e-52 | 217.0 |
35 | TraesCS2B01G458800 | chr3D | 88.172 | 186 | 14 | 7 | 675 | 857 | 569244423 | 569244603 | 1.300000e-51 | 215.0 |
36 | TraesCS2B01G458800 | chr7A | 89.759 | 166 | 9 | 8 | 676 | 838 | 648121515 | 648121355 | 7.840000e-49 | 206.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G458800 | chr2B | 653593210 | 653599175 | 5965 | True | 11018.0 | 11018 | 100.00000 | 1 | 5966 | 1 | chr2B.!!$R1 | 5965 |
1 | TraesCS2B01G458800 | chr2D | 546807645 | 546816148 | 8503 | True | 1845.5 | 4891 | 90.41675 | 1 | 5939 | 4 | chr2D.!!$R2 | 5938 |
2 | TraesCS2B01G458800 | chr2D | 546683565 | 546688191 | 4626 | True | 1356.5 | 3982 | 91.54880 | 916 | 5492 | 5 | chr2D.!!$R1 | 4576 |
3 | TraesCS2B01G458800 | chr2A | 689753779 | 689760280 | 6501 | False | 1547.0 | 3347 | 87.14575 | 905 | 5890 | 4 | chr2A.!!$F2 | 4985 |
4 | TraesCS2B01G458800 | chr7D | 72328698 | 72329522 | 824 | False | 822.0 | 822 | 84.95900 | 1429 | 2261 | 1 | chr7D.!!$F1 | 832 |
5 | TraesCS2B01G458800 | chr3A | 152724185 | 152724844 | 659 | True | 628.0 | 628 | 84.25000 | 1605 | 2261 | 1 | chr3A.!!$R1 | 656 |
6 | TraesCS2B01G458800 | chr4A | 8929866 | 8930668 | 802 | True | 625.0 | 625 | 81.19900 | 1429 | 2261 | 1 | chr4A.!!$R1 | 832 |
7 | TraesCS2B01G458800 | chr7B | 349587722 | 349588339 | 617 | True | 289.5 | 418 | 85.10400 | 1435 | 2429 | 2 | chr7B.!!$R2 | 994 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
622 | 710 | 0.031616 | AGAAGGGCTAGTGGAGGGAG | 60.032 | 60.000 | 0.0 | 0.0 | 0.00 | 4.30 | F |
624 | 712 | 0.031616 | AAGGGCTAGTGGAGGGAGAG | 60.032 | 60.000 | 0.0 | 0.0 | 0.00 | 3.20 | F |
954 | 1079 | 0.107654 | CCGGTGTTTCCTCCTCATCC | 60.108 | 60.000 | 0.0 | 0.0 | 0.00 | 3.51 | F |
1546 | 1685 | 0.319986 | GCGAAGGCTAGGATGTAGGC | 60.320 | 60.000 | 0.0 | 0.0 | 40.02 | 3.93 | F |
2919 | 4539 | 1.203013 | TCTCTGTCCCTCACTTTCCGA | 60.203 | 52.381 | 0.0 | 0.0 | 0.00 | 4.55 | F |
3992 | 5679 | 0.111089 | GTTCAGCTTCTGCACGAACG | 60.111 | 55.000 | 0.0 | 0.0 | 40.96 | 3.95 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1652 | 1802 | 1.064240 | AGCATTCACATCTCATGGCCA | 60.064 | 47.619 | 8.56 | 8.56 | 33.60 | 5.36 | R |
1945 | 2104 | 1.076485 | ATCCATGTCCTTGCCCAGC | 60.076 | 57.895 | 0.00 | 0.00 | 0.00 | 4.85 | R |
2360 | 2524 | 1.106285 | GCATCCCAACCAGCCTAAAG | 58.894 | 55.000 | 0.00 | 0.00 | 0.00 | 1.85 | R |
3181 | 4828 | 1.681264 | ACAGCCAAGCAGGTTAACAAC | 59.319 | 47.619 | 8.10 | 0.00 | 40.61 | 3.32 | R |
4492 | 6192 | 1.067635 | GTGGCCCATAGTGCAAACAAG | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 | R |
5662 | 10288 | 0.038159 | CTTCGACAAGCTCCGGTTCT | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
24 | 25 | 2.742053 | ACACGGTGTTGATTACATGAGC | 59.258 | 45.455 | 8.21 | 0.00 | 39.39 | 4.26 |
28 | 29 | 4.811024 | ACGGTGTTGATTACATGAGCATAG | 59.189 | 41.667 | 0.00 | 0.00 | 39.39 | 2.23 |
32 | 33 | 7.062722 | CGGTGTTGATTACATGAGCATAGATAG | 59.937 | 40.741 | 0.00 | 0.00 | 39.39 | 2.08 |
79 | 80 | 9.950496 | AACCTATATAGTCCTAAGCAATGATTG | 57.050 | 33.333 | 8.92 | 0.00 | 0.00 | 2.67 |
90 | 91 | 4.574674 | AGCAATGATTGGTTCTGGTCTA | 57.425 | 40.909 | 3.70 | 0.00 | 38.40 | 2.59 |
129 | 130 | 3.452474 | GGACACGAGATGAAGAAGATGG | 58.548 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
159 | 160 | 1.525442 | GGGGTAGGGACGTCATTGG | 59.475 | 63.158 | 18.91 | 0.00 | 0.00 | 3.16 |
170 | 173 | 4.202284 | GGGACGTCATTGGGTAGCTTATTA | 60.202 | 45.833 | 18.91 | 0.00 | 0.00 | 0.98 |
173 | 176 | 6.485648 | GGACGTCATTGGGTAGCTTATTAAAT | 59.514 | 38.462 | 18.91 | 0.00 | 0.00 | 1.40 |
177 | 180 | 7.660208 | CGTCATTGGGTAGCTTATTAAATAGGT | 59.340 | 37.037 | 0.00 | 0.00 | 0.00 | 3.08 |
178 | 181 | 9.000486 | GTCATTGGGTAGCTTATTAAATAGGTC | 58.000 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
185 | 188 | 6.592207 | AGCTTATTAAATAGGTCCAGGGTT | 57.408 | 37.500 | 0.00 | 0.00 | 0.00 | 4.11 |
194 | 197 | 2.929301 | AGGTCCAGGGTTAGGATTGAA | 58.071 | 47.619 | 0.00 | 0.00 | 37.52 | 2.69 |
195 | 198 | 2.846827 | AGGTCCAGGGTTAGGATTGAAG | 59.153 | 50.000 | 0.00 | 0.00 | 37.52 | 3.02 |
259 | 263 | 2.420058 | AGGTTTGATTCCGATGGACC | 57.580 | 50.000 | 0.00 | 0.00 | 0.00 | 4.46 |
260 | 264 | 1.916181 | AGGTTTGATTCCGATGGACCT | 59.084 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
264 | 268 | 4.258543 | GTTTGATTCCGATGGACCTTACA | 58.741 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
267 | 271 | 5.110814 | TGATTCCGATGGACCTTACAAAT | 57.889 | 39.130 | 0.00 | 0.00 | 0.00 | 2.32 |
270 | 274 | 7.113437 | TGATTCCGATGGACCTTACAAATTTA | 58.887 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
272 | 276 | 6.995511 | TCCGATGGACCTTACAAATTTAAG | 57.004 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
311 | 374 | 4.948341 | TGCTATTGATACTAAGGCCGAA | 57.052 | 40.909 | 0.00 | 0.00 | 0.00 | 4.30 |
316 | 379 | 1.406539 | TGATACTAAGGCCGAACCGAC | 59.593 | 52.381 | 0.00 | 0.00 | 46.52 | 4.79 |
318 | 381 | 0.676466 | TACTAAGGCCGAACCGACGA | 60.676 | 55.000 | 0.00 | 0.00 | 46.52 | 4.20 |
320 | 383 | 2.203972 | CTAAGGCCGAACCGACGACA | 62.204 | 60.000 | 0.00 | 0.00 | 46.52 | 4.35 |
322 | 385 | 4.353437 | GGCCGAACCGACGACACT | 62.353 | 66.667 | 0.00 | 0.00 | 35.09 | 3.55 |
324 | 387 | 2.333938 | CCGAACCGACGACACTGT | 59.666 | 61.111 | 0.00 | 0.00 | 35.09 | 3.55 |
327 | 390 | 1.266786 | CGAACCGACGACACTGTGAC | 61.267 | 60.000 | 15.86 | 7.56 | 35.09 | 3.67 |
330 | 393 | 1.440518 | CCGACGACACTGTGACGAG | 60.441 | 63.158 | 32.17 | 24.43 | 37.72 | 4.18 |
331 | 394 | 1.568025 | CGACGACACTGTGACGAGA | 59.432 | 57.895 | 32.17 | 0.00 | 37.72 | 4.04 |
332 | 395 | 0.451299 | CGACGACACTGTGACGAGAG | 60.451 | 60.000 | 32.17 | 20.22 | 37.72 | 3.20 |
361 | 424 | 2.034532 | TGGTGTCGCCGACTAGGA | 59.965 | 61.111 | 19.12 | 0.00 | 45.00 | 2.94 |
362 | 425 | 2.338015 | TGGTGTCGCCGACTAGGAC | 61.338 | 63.158 | 19.12 | 7.83 | 45.00 | 3.85 |
370 | 433 | 3.528370 | CGACTAGGACGGGCTGGG | 61.528 | 72.222 | 0.00 | 0.00 | 0.00 | 4.45 |
373 | 436 | 2.042843 | CTAGGACGGGCTGGGAGT | 60.043 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
376 | 439 | 4.083862 | GGACGGGCTGGGAGTGAC | 62.084 | 72.222 | 0.00 | 0.00 | 0.00 | 3.67 |
385 | 448 | 1.680522 | CTGGGAGTGACCTGGATCCG | 61.681 | 65.000 | 7.39 | 1.76 | 38.98 | 4.18 |
394 | 457 | 2.797278 | CCTGGATCCGGGGAAGACG | 61.797 | 68.421 | 29.94 | 4.02 | 38.78 | 4.18 |
397 | 460 | 2.582436 | GATCCGGGGAAGACGCAA | 59.418 | 61.111 | 0.00 | 0.00 | 0.00 | 4.85 |
400 | 463 | 4.367023 | CCGGGGAAGACGCAACGA | 62.367 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
404 | 467 | 2.370393 | GGGAAGACGCAACGACGAC | 61.370 | 63.158 | 0.00 | 0.00 | 36.70 | 4.34 |
405 | 468 | 2.704193 | GGAAGACGCAACGACGACG | 61.704 | 63.158 | 5.58 | 5.58 | 45.75 | 5.12 |
406 | 469 | 1.723542 | GAAGACGCAACGACGACGA | 60.724 | 57.895 | 15.32 | 0.00 | 42.66 | 4.20 |
407 | 470 | 1.917151 | GAAGACGCAACGACGACGAC | 61.917 | 60.000 | 15.32 | 3.02 | 42.66 | 4.34 |
414 | 477 | 3.844995 | AACGACGACGACGACACCG | 62.845 | 63.158 | 25.15 | 13.10 | 42.66 | 4.94 |
415 | 478 | 4.063230 | CGACGACGACGACACCGA | 62.063 | 66.667 | 15.32 | 0.00 | 42.66 | 4.69 |
416 | 479 | 2.202146 | GACGACGACGACACCGAG | 60.202 | 66.667 | 15.32 | 0.00 | 42.66 | 4.63 |
426 | 489 | 4.400251 | ACACCGAGGGAGGGGAGG | 62.400 | 72.222 | 0.00 | 0.00 | 38.30 | 4.30 |
437 | 500 | 1.622725 | GGAGGGGAGGCTAAGACTTGA | 60.623 | 57.143 | 0.00 | 0.00 | 0.00 | 3.02 |
438 | 501 | 2.403561 | GAGGGGAGGCTAAGACTTGAT | 58.596 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
439 | 502 | 3.577919 | GAGGGGAGGCTAAGACTTGATA | 58.422 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
443 | 506 | 4.202274 | GGGGAGGCTAAGACTTGATAGTTC | 60.202 | 50.000 | 0.00 | 0.00 | 33.84 | 3.01 |
454 | 518 | 2.364579 | ATAGTTCGGGGTGCGGGA | 60.365 | 61.111 | 0.00 | 0.00 | 0.00 | 5.14 |
469 | 533 | 2.750237 | GGATGGGTTGTCGGTGCC | 60.750 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
470 | 534 | 2.033448 | GATGGGTTGTCGGTGCCA | 59.967 | 61.111 | 0.00 | 0.00 | 0.00 | 4.92 |
471 | 535 | 1.602323 | GATGGGTTGTCGGTGCCAA | 60.602 | 57.895 | 0.00 | 0.00 | 0.00 | 4.52 |
484 | 548 | 2.351738 | CGGTGCCAAAGAAAAGGATGAC | 60.352 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
486 | 550 | 2.552315 | GTGCCAAAGAAAAGGATGACGA | 59.448 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
487 | 551 | 3.191371 | GTGCCAAAGAAAAGGATGACGAT | 59.809 | 43.478 | 0.00 | 0.00 | 0.00 | 3.73 |
490 | 554 | 4.096984 | GCCAAAGAAAAGGATGACGATGAT | 59.903 | 41.667 | 0.00 | 0.00 | 0.00 | 2.45 |
499 | 563 | 0.911769 | ATGACGATGATGGTGGTGGT | 59.088 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
503 | 567 | 1.909459 | CGATGATGGTGGTGGTGGGA | 61.909 | 60.000 | 0.00 | 0.00 | 0.00 | 4.37 |
505 | 569 | 0.549902 | ATGATGGTGGTGGTGGGAGA | 60.550 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
525 | 589 | 0.624795 | AAGGGGGCCTAGAGGAAAGG | 60.625 | 60.000 | 0.84 | 0.00 | 37.39 | 3.11 |
544 | 608 | 1.479323 | GGTCGGGTAGTAGCAACATGA | 59.521 | 52.381 | 0.00 | 0.00 | 0.00 | 3.07 |
593 | 681 | 3.199551 | GCGGCAGCATTGGATTGA | 58.800 | 55.556 | 3.18 | 0.00 | 44.35 | 2.57 |
594 | 682 | 1.065273 | GCGGCAGCATTGGATTGAG | 59.935 | 57.895 | 3.18 | 0.00 | 44.35 | 3.02 |
605 | 693 | 1.741028 | TGGATTGAGTGGGTGGAAGA | 58.259 | 50.000 | 0.00 | 0.00 | 0.00 | 2.87 |
607 | 695 | 2.040278 | TGGATTGAGTGGGTGGAAGAAG | 59.960 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
608 | 696 | 2.619074 | GGATTGAGTGGGTGGAAGAAGG | 60.619 | 54.545 | 0.00 | 0.00 | 0.00 | 3.46 |
609 | 697 | 0.771127 | TTGAGTGGGTGGAAGAAGGG | 59.229 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
610 | 698 | 1.002011 | GAGTGGGTGGAAGAAGGGC | 60.002 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
611 | 699 | 1.464198 | AGTGGGTGGAAGAAGGGCT | 60.464 | 57.895 | 0.00 | 0.00 | 0.00 | 5.19 |
612 | 700 | 0.178873 | AGTGGGTGGAAGAAGGGCTA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.93 |
614 | 702 | 0.178873 | TGGGTGGAAGAAGGGCTAGT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
618 | 706 | 1.208293 | GTGGAAGAAGGGCTAGTGGAG | 59.792 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
620 | 708 | 0.833949 | GAAGAAGGGCTAGTGGAGGG | 59.166 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
622 | 710 | 0.031616 | AGAAGGGCTAGTGGAGGGAG | 60.032 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
623 | 711 | 0.032017 | GAAGGGCTAGTGGAGGGAGA | 60.032 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
624 | 712 | 0.031616 | AAGGGCTAGTGGAGGGAGAG | 60.032 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
626 | 714 | 1.311747 | GGCTAGTGGAGGGAGAGGT | 59.688 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
627 | 715 | 0.325765 | GGCTAGTGGAGGGAGAGGTT | 60.326 | 60.000 | 0.00 | 0.00 | 0.00 | 3.50 |
628 | 716 | 1.063114 | GGCTAGTGGAGGGAGAGGTTA | 60.063 | 57.143 | 0.00 | 0.00 | 0.00 | 2.85 |
629 | 717 | 2.033372 | GCTAGTGGAGGGAGAGGTTAC | 58.967 | 57.143 | 0.00 | 0.00 | 0.00 | 2.50 |
630 | 718 | 2.623502 | GCTAGTGGAGGGAGAGGTTACA | 60.624 | 54.545 | 0.00 | 0.00 | 0.00 | 2.41 |
631 | 719 | 2.950990 | AGTGGAGGGAGAGGTTACAT | 57.049 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
632 | 720 | 2.472029 | AGTGGAGGGAGAGGTTACATG | 58.528 | 52.381 | 0.00 | 0.00 | 0.00 | 3.21 |
633 | 721 | 2.044492 | AGTGGAGGGAGAGGTTACATGA | 59.956 | 50.000 | 0.00 | 0.00 | 0.00 | 3.07 |
634 | 722 | 2.432510 | GTGGAGGGAGAGGTTACATGAG | 59.567 | 54.545 | 0.00 | 0.00 | 0.00 | 2.90 |
635 | 723 | 2.044492 | TGGAGGGAGAGGTTACATGAGT | 59.956 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
636 | 724 | 2.696187 | GGAGGGAGAGGTTACATGAGTC | 59.304 | 54.545 | 0.00 | 0.00 | 0.00 | 3.36 |
637 | 725 | 2.359531 | GAGGGAGAGGTTACATGAGTCG | 59.640 | 54.545 | 0.00 | 0.00 | 0.00 | 4.18 |
638 | 726 | 2.100989 | GGGAGAGGTTACATGAGTCGT | 58.899 | 52.381 | 0.00 | 0.00 | 0.00 | 4.34 |
639 | 727 | 2.496470 | GGGAGAGGTTACATGAGTCGTT | 59.504 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
640 | 728 | 3.512680 | GGAGAGGTTACATGAGTCGTTG | 58.487 | 50.000 | 0.00 | 0.00 | 0.00 | 4.10 |
641 | 729 | 3.192844 | GGAGAGGTTACATGAGTCGTTGA | 59.807 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
642 | 730 | 4.321750 | GGAGAGGTTACATGAGTCGTTGAA | 60.322 | 45.833 | 0.00 | 0.00 | 0.00 | 2.69 |
643 | 731 | 5.407407 | AGAGGTTACATGAGTCGTTGAAT | 57.593 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
644 | 732 | 5.794894 | AGAGGTTACATGAGTCGTTGAATT | 58.205 | 37.500 | 0.00 | 0.00 | 0.00 | 2.17 |
645 | 733 | 6.231211 | AGAGGTTACATGAGTCGTTGAATTT | 58.769 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
646 | 734 | 7.383687 | AGAGGTTACATGAGTCGTTGAATTTA | 58.616 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
647 | 735 | 7.876068 | AGAGGTTACATGAGTCGTTGAATTTAA | 59.124 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
648 | 736 | 8.385898 | AGGTTACATGAGTCGTTGAATTTAAA | 57.614 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
649 | 737 | 9.010029 | AGGTTACATGAGTCGTTGAATTTAAAT | 57.990 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
650 | 738 | 9.274065 | GGTTACATGAGTCGTTGAATTTAAATC | 57.726 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
651 | 739 | 8.985694 | GTTACATGAGTCGTTGAATTTAAATCG | 58.014 | 33.333 | 0.00 | 1.02 | 0.00 | 3.34 |
652 | 740 | 7.359262 | ACATGAGTCGTTGAATTTAAATCGA | 57.641 | 32.000 | 0.00 | 3.51 | 0.00 | 3.59 |
653 | 741 | 7.802738 | ACATGAGTCGTTGAATTTAAATCGAA | 58.197 | 30.769 | 10.26 | 0.78 | 0.00 | 3.71 |
654 | 742 | 7.744715 | ACATGAGTCGTTGAATTTAAATCGAAC | 59.255 | 33.333 | 10.26 | 10.29 | 0.00 | 3.95 |
655 | 743 | 6.293618 | TGAGTCGTTGAATTTAAATCGAACG | 58.706 | 36.000 | 24.84 | 24.84 | 37.98 | 3.95 |
656 | 744 | 5.614760 | AGTCGTTGAATTTAAATCGAACGG | 58.385 | 37.500 | 27.44 | 17.30 | 37.40 | 4.44 |
657 | 745 | 4.259046 | GTCGTTGAATTTAAATCGAACGGC | 59.741 | 41.667 | 27.44 | 25.20 | 37.40 | 5.68 |
658 | 746 | 4.152759 | TCGTTGAATTTAAATCGAACGGCT | 59.847 | 37.500 | 27.44 | 5.11 | 37.40 | 5.52 |
659 | 747 | 5.348179 | TCGTTGAATTTAAATCGAACGGCTA | 59.652 | 36.000 | 27.44 | 15.89 | 37.40 | 3.93 |
660 | 748 | 6.016718 | CGTTGAATTTAAATCGAACGGCTAA | 58.983 | 36.000 | 23.92 | 3.16 | 34.12 | 3.09 |
661 | 749 | 6.520447 | CGTTGAATTTAAATCGAACGGCTAAA | 59.480 | 34.615 | 23.92 | 0.00 | 34.12 | 1.85 |
662 | 750 | 7.059716 | CGTTGAATTTAAATCGAACGGCTAAAA | 59.940 | 33.333 | 23.92 | 0.00 | 34.12 | 1.52 |
663 | 751 | 8.692615 | GTTGAATTTAAATCGAACGGCTAAAAA | 58.307 | 29.630 | 0.10 | 0.00 | 0.00 | 1.94 |
716 | 804 | 4.616181 | AAGTGATAGGCGTTAATTGTGC | 57.384 | 40.909 | 0.00 | 0.00 | 0.00 | 4.57 |
717 | 805 | 2.607635 | AGTGATAGGCGTTAATTGTGCG | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 5.34 |
718 | 806 | 2.350498 | GTGATAGGCGTTAATTGTGCGT | 59.650 | 45.455 | 0.00 | 0.00 | 0.00 | 5.24 |
719 | 807 | 3.004171 | TGATAGGCGTTAATTGTGCGTT | 58.996 | 40.909 | 0.00 | 0.00 | 0.00 | 4.84 |
720 | 808 | 3.437395 | TGATAGGCGTTAATTGTGCGTTT | 59.563 | 39.130 | 0.00 | 0.00 | 0.00 | 3.60 |
721 | 809 | 2.785713 | AGGCGTTAATTGTGCGTTTT | 57.214 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
722 | 810 | 2.389998 | AGGCGTTAATTGTGCGTTTTG | 58.610 | 42.857 | 0.00 | 0.00 | 0.00 | 2.44 |
723 | 811 | 1.136748 | GGCGTTAATTGTGCGTTTTGC | 60.137 | 47.619 | 0.00 | 0.00 | 46.70 | 3.68 |
724 | 812 | 1.136748 | GCGTTAATTGTGCGTTTTGCC | 60.137 | 47.619 | 0.00 | 0.00 | 45.60 | 4.52 |
725 | 813 | 2.120232 | CGTTAATTGTGCGTTTTGCCA | 58.880 | 42.857 | 0.00 | 0.00 | 45.60 | 4.92 |
726 | 814 | 2.097637 | CGTTAATTGTGCGTTTTGCCAC | 60.098 | 45.455 | 0.00 | 0.00 | 45.60 | 5.01 |
727 | 815 | 2.141535 | TAATTGTGCGTTTTGCCACC | 57.858 | 45.000 | 0.00 | 0.00 | 45.60 | 4.61 |
728 | 816 | 0.873743 | AATTGTGCGTTTTGCCACCG | 60.874 | 50.000 | 0.00 | 0.00 | 45.60 | 4.94 |
729 | 817 | 4.560856 | TGTGCGTTTTGCCACCGC | 62.561 | 61.111 | 0.00 | 0.00 | 45.60 | 5.68 |
732 | 820 | 4.279043 | GCGTTTTGCCACCGCCTT | 62.279 | 61.111 | 0.00 | 0.00 | 41.50 | 4.35 |
733 | 821 | 2.354539 | CGTTTTGCCACCGCCTTG | 60.355 | 61.111 | 0.00 | 0.00 | 0.00 | 3.61 |
734 | 822 | 2.661537 | GTTTTGCCACCGCCTTGC | 60.662 | 61.111 | 0.00 | 0.00 | 0.00 | 4.01 |
746 | 834 | 1.502190 | GCCTTGCGCTTTACTGACC | 59.498 | 57.895 | 9.73 | 0.00 | 0.00 | 4.02 |
747 | 835 | 1.234615 | GCCTTGCGCTTTACTGACCA | 61.235 | 55.000 | 9.73 | 0.00 | 0.00 | 4.02 |
748 | 836 | 1.234821 | CCTTGCGCTTTACTGACCAA | 58.765 | 50.000 | 9.73 | 0.00 | 0.00 | 3.67 |
749 | 837 | 1.606668 | CCTTGCGCTTTACTGACCAAA | 59.393 | 47.619 | 9.73 | 0.00 | 0.00 | 3.28 |
750 | 838 | 2.350772 | CCTTGCGCTTTACTGACCAAAG | 60.351 | 50.000 | 9.73 | 0.00 | 36.32 | 2.77 |
753 | 841 | 3.384702 | GCTTTACTGACCAAAGCGC | 57.615 | 52.632 | 0.00 | 0.00 | 45.88 | 5.92 |
754 | 842 | 0.591170 | GCTTTACTGACCAAAGCGCA | 59.409 | 50.000 | 11.47 | 0.00 | 45.88 | 6.09 |
755 | 843 | 1.200020 | GCTTTACTGACCAAAGCGCAT | 59.800 | 47.619 | 11.47 | 0.00 | 45.88 | 4.73 |
756 | 844 | 2.855180 | CTTTACTGACCAAAGCGCATG | 58.145 | 47.619 | 11.47 | 8.38 | 0.00 | 4.06 |
757 | 845 | 0.521291 | TTACTGACCAAAGCGCATGC | 59.479 | 50.000 | 11.47 | 7.91 | 43.24 | 4.06 |
771 | 859 | 2.693797 | GCATGCTTATGCGCAGTTAT | 57.306 | 45.000 | 18.32 | 0.10 | 44.10 | 1.89 |
772 | 860 | 2.313234 | GCATGCTTATGCGCAGTTATG | 58.687 | 47.619 | 18.32 | 15.92 | 44.10 | 1.90 |
794 | 882 | 6.772770 | TGCACATATTAATGCGTAATACGT | 57.227 | 33.333 | 14.57 | 0.00 | 45.13 | 3.57 |
795 | 883 | 7.179927 | TGCACATATTAATGCGTAATACGTT | 57.820 | 32.000 | 14.57 | 4.43 | 45.13 | 3.99 |
796 | 884 | 7.631822 | TGCACATATTAATGCGTAATACGTTT | 58.368 | 30.769 | 14.57 | 10.71 | 45.13 | 3.60 |
797 | 885 | 8.123575 | TGCACATATTAATGCGTAATACGTTTT | 58.876 | 29.630 | 14.57 | 10.39 | 45.13 | 2.43 |
798 | 886 | 8.406716 | GCACATATTAATGCGTAATACGTTTTG | 58.593 | 33.333 | 14.57 | 6.59 | 44.73 | 2.44 |
799 | 887 | 8.406716 | CACATATTAATGCGTAATACGTTTTGC | 58.593 | 33.333 | 14.57 | 0.00 | 44.73 | 3.68 |
800 | 888 | 7.588488 | ACATATTAATGCGTAATACGTTTTGCC | 59.412 | 33.333 | 14.57 | 0.00 | 44.73 | 4.52 |
801 | 889 | 3.833545 | AATGCGTAATACGTTTTGCCA | 57.166 | 38.095 | 14.57 | 3.02 | 44.73 | 4.92 |
802 | 890 | 3.833545 | ATGCGTAATACGTTTTGCCAA | 57.166 | 38.095 | 14.57 | 0.00 | 44.73 | 4.52 |
803 | 891 | 2.918616 | TGCGTAATACGTTTTGCCAAC | 58.081 | 42.857 | 14.57 | 0.00 | 44.73 | 3.77 |
804 | 892 | 1.899971 | GCGTAATACGTTTTGCCAACG | 59.100 | 47.619 | 14.57 | 14.81 | 44.73 | 4.10 |
805 | 893 | 1.899971 | CGTAATACGTTTTGCCAACGC | 59.100 | 47.619 | 15.99 | 1.74 | 46.58 | 4.84 |
806 | 894 | 2.244251 | GTAATACGTTTTGCCAACGCC | 58.756 | 47.619 | 15.99 | 0.00 | 46.58 | 5.68 |
807 | 895 | 0.955905 | AATACGTTTTGCCAACGCCT | 59.044 | 45.000 | 15.99 | 3.51 | 46.58 | 5.52 |
808 | 896 | 1.810959 | ATACGTTTTGCCAACGCCTA | 58.189 | 45.000 | 15.99 | 5.05 | 46.58 | 3.93 |
809 | 897 | 1.149987 | TACGTTTTGCCAACGCCTAG | 58.850 | 50.000 | 15.99 | 0.00 | 46.58 | 3.02 |
810 | 898 | 0.533308 | ACGTTTTGCCAACGCCTAGA | 60.533 | 50.000 | 15.99 | 0.00 | 46.58 | 2.43 |
811 | 899 | 0.165944 | CGTTTTGCCAACGCCTAGAG | 59.834 | 55.000 | 5.44 | 0.00 | 36.82 | 2.43 |
812 | 900 | 0.109735 | GTTTTGCCAACGCCTAGAGC | 60.110 | 55.000 | 0.00 | 0.00 | 38.52 | 4.09 |
813 | 901 | 1.241315 | TTTTGCCAACGCCTAGAGCC | 61.241 | 55.000 | 0.00 | 0.00 | 38.78 | 4.70 |
814 | 902 | 2.124507 | TTTGCCAACGCCTAGAGCCT | 62.125 | 55.000 | 0.00 | 0.00 | 38.78 | 4.58 |
815 | 903 | 1.261938 | TTGCCAACGCCTAGAGCCTA | 61.262 | 55.000 | 0.00 | 0.00 | 38.78 | 3.93 |
816 | 904 | 1.261938 | TGCCAACGCCTAGAGCCTAA | 61.262 | 55.000 | 0.00 | 0.00 | 38.78 | 2.69 |
817 | 905 | 0.530870 | GCCAACGCCTAGAGCCTAAG | 60.531 | 60.000 | 0.00 | 0.00 | 38.78 | 2.18 |
818 | 906 | 0.530870 | CCAACGCCTAGAGCCTAAGC | 60.531 | 60.000 | 0.00 | 0.00 | 38.78 | 3.09 |
820 | 908 | 2.355244 | CGCCTAGAGCCTAAGCGC | 60.355 | 66.667 | 0.00 | 0.00 | 46.67 | 5.92 |
821 | 909 | 2.355244 | GCCTAGAGCCTAAGCGCG | 60.355 | 66.667 | 0.00 | 0.00 | 44.54 | 6.86 |
822 | 910 | 2.355244 | CCTAGAGCCTAAGCGCGC | 60.355 | 66.667 | 26.66 | 26.66 | 44.54 | 6.86 |
823 | 911 | 2.727647 | CTAGAGCCTAAGCGCGCG | 60.728 | 66.667 | 28.44 | 28.44 | 44.54 | 6.86 |
824 | 912 | 4.925576 | TAGAGCCTAAGCGCGCGC | 62.926 | 66.667 | 45.10 | 45.10 | 44.54 | 6.86 |
836 | 924 | 4.856607 | GCGCGCTTAGGCTCGTCT | 62.857 | 66.667 | 26.67 | 0.00 | 46.64 | 4.18 |
837 | 925 | 2.202623 | CGCGCTTAGGCTCGTCTT | 60.203 | 61.111 | 5.56 | 0.00 | 41.09 | 3.01 |
838 | 926 | 1.805945 | CGCGCTTAGGCTCGTCTTT | 60.806 | 57.895 | 5.56 | 0.00 | 41.09 | 2.52 |
839 | 927 | 1.352156 | CGCGCTTAGGCTCGTCTTTT | 61.352 | 55.000 | 5.56 | 0.00 | 41.09 | 2.27 |
840 | 928 | 0.796927 | GCGCTTAGGCTCGTCTTTTT | 59.203 | 50.000 | 0.00 | 0.00 | 36.09 | 1.94 |
951 | 1076 | 2.111999 | CTGCCGGTGTTTCCTCCTCA | 62.112 | 60.000 | 1.90 | 0.00 | 0.00 | 3.86 |
954 | 1079 | 0.107654 | CCGGTGTTTCCTCCTCATCC | 60.108 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
968 | 1093 | 3.321648 | ATCCTGTCACGGCAGCCA | 61.322 | 61.111 | 13.30 | 0.00 | 35.28 | 4.75 |
970 | 1095 | 4.320456 | CCTGTCACGGCAGCCAGT | 62.320 | 66.667 | 13.30 | 7.71 | 35.28 | 4.00 |
984 | 1120 | 1.069823 | AGCCAGTCAGTCAGTGAAGTG | 59.930 | 52.381 | 0.00 | 0.00 | 36.74 | 3.16 |
1357 | 1494 | 0.750850 | CGTCACCGAGGTATTGGGAT | 59.249 | 55.000 | 0.00 | 0.00 | 33.68 | 3.85 |
1358 | 1495 | 1.138266 | CGTCACCGAGGTATTGGGATT | 59.862 | 52.381 | 0.00 | 0.00 | 33.68 | 3.01 |
1369 | 1506 | 0.970427 | ATTGGGATTTTTCCGGCGCT | 60.970 | 50.000 | 7.64 | 0.00 | 0.00 | 5.92 |
1386 | 1523 | 2.350484 | GCGCTTGGTTGTTTCCTCTAAC | 60.350 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
1419 | 1556 | 5.047802 | GTGAGGTTGTGAATTGGTGAATGAT | 60.048 | 40.000 | 0.00 | 0.00 | 0.00 | 2.45 |
1442 | 1579 | 1.826385 | CATTCTTGGGTGTGGAGTCC | 58.174 | 55.000 | 0.73 | 0.73 | 0.00 | 3.85 |
1546 | 1685 | 0.319986 | GCGAAGGCTAGGATGTAGGC | 60.320 | 60.000 | 0.00 | 0.00 | 40.02 | 3.93 |
1736 | 1886 | 3.200483 | GAGGTTGTACGGTTTGTTCACT | 58.800 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
1769 | 1920 | 2.499685 | GAATGTCGGGTAGGCGCT | 59.500 | 61.111 | 7.64 | 0.00 | 0.00 | 5.92 |
2441 | 2605 | 7.768120 | TGGCAGTTCAGTTGATTAATTGTTTTT | 59.232 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
2495 | 2659 | 7.290857 | TCGACAATAAAAGAACACATAGCTC | 57.709 | 36.000 | 0.00 | 0.00 | 0.00 | 4.09 |
2862 | 4482 | 2.766263 | TCACTGCAGGGTTCTGTATAGG | 59.234 | 50.000 | 17.28 | 0.00 | 42.78 | 2.57 |
2863 | 4483 | 2.119495 | ACTGCAGGGTTCTGTATAGGG | 58.881 | 52.381 | 19.93 | 0.00 | 42.78 | 3.53 |
2864 | 4484 | 2.119495 | CTGCAGGGTTCTGTATAGGGT | 58.881 | 52.381 | 5.57 | 0.00 | 42.78 | 4.34 |
2865 | 4485 | 1.837439 | TGCAGGGTTCTGTATAGGGTG | 59.163 | 52.381 | 0.00 | 0.00 | 42.78 | 4.61 |
2866 | 4486 | 1.838077 | GCAGGGTTCTGTATAGGGTGT | 59.162 | 52.381 | 0.00 | 0.00 | 42.78 | 4.16 |
2867 | 4487 | 2.238898 | GCAGGGTTCTGTATAGGGTGTT | 59.761 | 50.000 | 0.00 | 0.00 | 42.78 | 3.32 |
2868 | 4488 | 3.308188 | GCAGGGTTCTGTATAGGGTGTTT | 60.308 | 47.826 | 0.00 | 0.00 | 42.78 | 2.83 |
2869 | 4489 | 4.080751 | GCAGGGTTCTGTATAGGGTGTTTA | 60.081 | 45.833 | 0.00 | 0.00 | 42.78 | 2.01 |
2870 | 4490 | 5.397559 | GCAGGGTTCTGTATAGGGTGTTTAT | 60.398 | 44.000 | 0.00 | 0.00 | 42.78 | 1.40 |
2871 | 4491 | 6.183361 | GCAGGGTTCTGTATAGGGTGTTTATA | 60.183 | 42.308 | 0.00 | 0.00 | 42.78 | 0.98 |
2872 | 4492 | 7.474364 | GCAGGGTTCTGTATAGGGTGTTTATAT | 60.474 | 40.741 | 0.00 | 0.00 | 42.78 | 0.86 |
2873 | 4493 | 9.096823 | CAGGGTTCTGTATAGGGTGTTTATATA | 57.903 | 37.037 | 0.00 | 0.00 | 36.30 | 0.86 |
2874 | 4494 | 9.854303 | AGGGTTCTGTATAGGGTGTTTATATAT | 57.146 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
2919 | 4539 | 1.203013 | TCTCTGTCCCTCACTTTCCGA | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 4.55 |
3102 | 4749 | 8.942338 | TTTCTTATACAGTACATGGCTACAAG | 57.058 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
3181 | 4828 | 7.268199 | TCAATCTGGCTGCTTTGATATTAAG | 57.732 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
3208 | 4856 | 0.319297 | CCTGCTTGGCTGTTTTGCTC | 60.319 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
3251 | 4899 | 5.063880 | AGTTCAGAAACTTGCGGATTACTT | 58.936 | 37.500 | 0.00 | 0.00 | 43.28 | 2.24 |
3252 | 4900 | 6.228258 | AGTTCAGAAACTTGCGGATTACTTA | 58.772 | 36.000 | 0.00 | 0.00 | 43.28 | 2.24 |
3316 | 4969 | 4.223477 | AGTTTGCCAATTGCCACATCTAAT | 59.777 | 37.500 | 0.00 | 0.00 | 40.16 | 1.73 |
3436 | 5092 | 6.811665 | GGTATACATTGCTTTCCTTTCCAAAC | 59.188 | 38.462 | 5.01 | 0.00 | 0.00 | 2.93 |
3455 | 5139 | 1.493022 | ACCAAACTGTAAGCACTCCCA | 59.507 | 47.619 | 0.00 | 0.00 | 37.60 | 4.37 |
3472 | 5156 | 5.069781 | CACTCCCAAAATACCAAAAGTTCCA | 59.930 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3552 | 5236 | 8.751242 | TGGAGCATTTTTATTTCAGAATCATGA | 58.249 | 29.630 | 0.00 | 0.00 | 0.00 | 3.07 |
3581 | 5265 | 8.559301 | ATTGATCCCAACTTCATATGGAACACC | 61.559 | 40.741 | 2.13 | 0.00 | 39.12 | 4.16 |
3637 | 5321 | 3.195396 | TGCAATGATTTGGGGTTTCTAGC | 59.805 | 43.478 | 0.00 | 0.00 | 33.22 | 3.42 |
3802 | 5488 | 9.035890 | TCTGGATGATAGAATCGTGGTTATATT | 57.964 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
3992 | 5679 | 0.111089 | GTTCAGCTTCTGCACGAACG | 60.111 | 55.000 | 0.00 | 0.00 | 40.96 | 3.95 |
4026 | 5713 | 2.957060 | TCGTCTCCGACTTGATGGT | 58.043 | 52.632 | 0.00 | 0.00 | 38.40 | 3.55 |
4386 | 6075 | 7.581213 | TTGATTTGTGATGGTTACAAGAGTT | 57.419 | 32.000 | 0.00 | 0.00 | 39.03 | 3.01 |
4482 | 6182 | 2.603075 | AGCCTTTTAAGTGATGGCCA | 57.397 | 45.000 | 8.56 | 8.56 | 44.19 | 5.36 |
4483 | 6183 | 2.888212 | AGCCTTTTAAGTGATGGCCAA | 58.112 | 42.857 | 10.96 | 0.00 | 44.19 | 4.52 |
4492 | 6192 | 0.807496 | GTGATGGCCAAGAAGCTCAC | 59.193 | 55.000 | 10.96 | 14.75 | 0.00 | 3.51 |
4515 | 8968 | 2.291217 | TGTTTGCACTATGGGCCACATA | 60.291 | 45.455 | 9.28 | 9.35 | 41.03 | 2.29 |
4629 | 9082 | 8.394121 | GTCTAATGACTTTGACCTGAATCAATC | 58.606 | 37.037 | 0.00 | 0.00 | 39.94 | 2.67 |
4638 | 9091 | 4.523943 | TGACCTGAATCAATCAAGGTTTGG | 59.476 | 41.667 | 0.00 | 0.00 | 38.72 | 3.28 |
4648 | 9101 | 1.071071 | TCAAGGTTTGGTACACCTCCG | 59.929 | 52.381 | 3.97 | 0.18 | 44.48 | 4.63 |
4655 | 9108 | 4.510571 | GTTTGGTACACCTCCGTATTGAT | 58.489 | 43.478 | 0.00 | 0.00 | 39.29 | 2.57 |
4803 | 9256 | 6.233434 | TCTTGCTTGTTCAGATCTTATGTGT | 58.767 | 36.000 | 0.00 | 0.00 | 0.00 | 3.72 |
4868 | 9321 | 1.661341 | CCTTACTGTGAGAGGCATGC | 58.339 | 55.000 | 9.90 | 9.90 | 0.00 | 4.06 |
4881 | 9334 | 3.118884 | AGAGGCATGCAAATTTGATGGTC | 60.119 | 43.478 | 22.31 | 10.60 | 0.00 | 4.02 |
4957 | 9410 | 2.949644 | TCGCACGAGAATCAGGAAGATA | 59.050 | 45.455 | 0.00 | 0.00 | 35.39 | 1.98 |
5111 | 9565 | 7.011669 | CGTATCATGATGCTGAATTATATGCCA | 59.988 | 37.037 | 18.72 | 0.00 | 0.00 | 4.92 |
5140 | 9597 | 5.626543 | CCATCAAATGAAGCGGAATATTTCG | 59.373 | 40.000 | 11.99 | 11.99 | 0.00 | 3.46 |
5144 | 9601 | 2.285083 | TGAAGCGGAATATTTCGTGGG | 58.715 | 47.619 | 17.25 | 0.00 | 0.00 | 4.61 |
5165 | 9622 | 3.262420 | GCTCGTCCAAGTGATTGTATGT | 58.738 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
5173 | 9631 | 5.825151 | TCCAAGTGATTGTATGTGTTGACAA | 59.175 | 36.000 | 0.00 | 0.00 | 39.74 | 3.18 |
5219 | 9694 | 7.148355 | CCTTAATTTTGCAGGCATTTTGAAT | 57.852 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5261 | 9743 | 4.331968 | TGACACCATTATTCACCTTCACC | 58.668 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
5495 | 10089 | 2.186384 | CGAGAGGAAGCTGCAGGG | 59.814 | 66.667 | 17.12 | 0.00 | 0.00 | 4.45 |
5656 | 10282 | 0.608640 | AACCGGAGCTTGTCGAAGAT | 59.391 | 50.000 | 9.46 | 0.00 | 40.67 | 2.40 |
5660 | 10286 | 1.923204 | CGGAGCTTGTCGAAGATGAAG | 59.077 | 52.381 | 0.00 | 0.00 | 40.67 | 3.02 |
5661 | 10287 | 2.275318 | GGAGCTTGTCGAAGATGAAGG | 58.725 | 52.381 | 0.00 | 0.00 | 40.67 | 3.46 |
5662 | 10288 | 2.093973 | GGAGCTTGTCGAAGATGAAGGA | 60.094 | 50.000 | 0.00 | 0.00 | 40.67 | 3.36 |
5664 | 10290 | 2.828520 | AGCTTGTCGAAGATGAAGGAGA | 59.171 | 45.455 | 0.00 | 0.00 | 40.67 | 3.71 |
5665 | 10291 | 3.259374 | AGCTTGTCGAAGATGAAGGAGAA | 59.741 | 43.478 | 0.00 | 0.00 | 40.67 | 2.87 |
5666 | 10292 | 3.369451 | GCTTGTCGAAGATGAAGGAGAAC | 59.631 | 47.826 | 0.00 | 0.00 | 40.67 | 3.01 |
5667 | 10293 | 3.594603 | TGTCGAAGATGAAGGAGAACC | 57.405 | 47.619 | 0.00 | 0.00 | 40.67 | 3.62 |
5668 | 10294 | 2.094700 | TGTCGAAGATGAAGGAGAACCG | 60.095 | 50.000 | 0.00 | 0.00 | 40.67 | 4.44 |
5669 | 10295 | 1.476891 | TCGAAGATGAAGGAGAACCGG | 59.523 | 52.381 | 0.00 | 0.00 | 41.83 | 5.28 |
5670 | 10296 | 1.476891 | CGAAGATGAAGGAGAACCGGA | 59.523 | 52.381 | 9.46 | 0.00 | 41.83 | 5.14 |
5671 | 10297 | 2.480416 | CGAAGATGAAGGAGAACCGGAG | 60.480 | 54.545 | 9.46 | 0.00 | 41.83 | 4.63 |
5672 | 10298 | 0.827368 | AGATGAAGGAGAACCGGAGC | 59.173 | 55.000 | 9.46 | 0.00 | 41.83 | 4.70 |
5673 | 10299 | 0.827368 | GATGAAGGAGAACCGGAGCT | 59.173 | 55.000 | 9.46 | 4.04 | 41.83 | 4.09 |
5674 | 10300 | 1.208293 | GATGAAGGAGAACCGGAGCTT | 59.792 | 52.381 | 9.46 | 0.00 | 41.83 | 3.74 |
5675 | 10301 | 0.321671 | TGAAGGAGAACCGGAGCTTG | 59.678 | 55.000 | 9.46 | 0.00 | 41.83 | 4.01 |
5676 | 10302 | 0.321996 | GAAGGAGAACCGGAGCTTGT | 59.678 | 55.000 | 9.46 | 0.00 | 41.83 | 3.16 |
5677 | 10303 | 0.321996 | AAGGAGAACCGGAGCTTGTC | 59.678 | 55.000 | 9.46 | 0.00 | 41.83 | 3.18 |
5678 | 10304 | 1.446272 | GGAGAACCGGAGCTTGTCG | 60.446 | 63.158 | 9.46 | 0.00 | 0.00 | 4.35 |
5679 | 10305 | 1.585006 | GAGAACCGGAGCTTGTCGA | 59.415 | 57.895 | 9.46 | 0.00 | 0.00 | 4.20 |
5680 | 10306 | 0.038526 | GAGAACCGGAGCTTGTCGAA | 60.039 | 55.000 | 9.46 | 0.00 | 0.00 | 3.71 |
5681 | 10307 | 0.038159 | AGAACCGGAGCTTGTCGAAG | 60.038 | 55.000 | 9.46 | 0.00 | 0.00 | 3.79 |
5682 | 10308 | 0.038526 | GAACCGGAGCTTGTCGAAGA | 60.039 | 55.000 | 9.46 | 0.00 | 0.00 | 2.87 |
5683 | 10309 | 0.608640 | AACCGGAGCTTGTCGAAGAT | 59.391 | 50.000 | 9.46 | 0.00 | 40.67 | 2.40 |
5684 | 10310 | 0.108615 | ACCGGAGCTTGTCGAAGATG | 60.109 | 55.000 | 9.46 | 0.00 | 40.67 | 2.90 |
5685 | 10311 | 0.173481 | CCGGAGCTTGTCGAAGATGA | 59.827 | 55.000 | 0.00 | 0.00 | 40.67 | 2.92 |
5686 | 10312 | 1.404181 | CCGGAGCTTGTCGAAGATGAA | 60.404 | 52.381 | 0.00 | 0.00 | 40.67 | 2.57 |
5687 | 10313 | 1.923204 | CGGAGCTTGTCGAAGATGAAG | 59.077 | 52.381 | 0.00 | 0.00 | 40.67 | 3.02 |
5715 | 10341 | 1.546476 | GGAGCTTGTCGAAGAGGAGAA | 59.454 | 52.381 | 0.00 | 0.00 | 36.95 | 2.87 |
5717 | 10343 | 1.964223 | AGCTTGTCGAAGAGGAGAACA | 59.036 | 47.619 | 0.00 | 0.00 | 36.95 | 3.18 |
5727 | 10353 | 1.816863 | GAGGAGAACACACGGAGGCA | 61.817 | 60.000 | 0.00 | 0.00 | 0.00 | 4.75 |
5728 | 10354 | 1.374758 | GGAGAACACACGGAGGCAG | 60.375 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
5729 | 10355 | 1.666011 | GAGAACACACGGAGGCAGA | 59.334 | 57.895 | 0.00 | 0.00 | 0.00 | 4.26 |
5730 | 10356 | 0.389166 | GAGAACACACGGAGGCAGAG | 60.389 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
5731 | 10357 | 0.827925 | AGAACACACGGAGGCAGAGA | 60.828 | 55.000 | 0.00 | 0.00 | 0.00 | 3.10 |
5732 | 10358 | 0.033504 | GAACACACGGAGGCAGAGAA | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
5733 | 10359 | 0.249911 | AACACACGGAGGCAGAGAAC | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5734 | 10360 | 1.115930 | ACACACGGAGGCAGAGAACT | 61.116 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5735 | 10361 | 0.668706 | CACACGGAGGCAGAGAACTG | 60.669 | 60.000 | 0.00 | 0.00 | 45.91 | 3.16 |
5736 | 10362 | 0.827925 | ACACGGAGGCAGAGAACTGA | 60.828 | 55.000 | 0.00 | 0.00 | 46.03 | 3.41 |
5750 | 10376 | 3.426615 | AGAACTGAGAGAAGATGACGGT | 58.573 | 45.455 | 0.00 | 0.00 | 0.00 | 4.83 |
5755 | 10381 | 2.290960 | TGAGAGAAGATGACGGTGAGGA | 60.291 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
5831 | 10459 | 2.060383 | AGAGCGCTAGGACATGGCA | 61.060 | 57.895 | 11.50 | 0.00 | 34.43 | 4.92 |
5872 | 10501 | 2.330372 | CCACGAGGACGAAGGACGA | 61.330 | 63.158 | 0.00 | 0.00 | 45.65 | 4.20 |
5875 | 10504 | 2.675056 | CGAGGACGAAGGACGACGT | 61.675 | 63.158 | 0.00 | 0.00 | 45.77 | 4.34 |
5921 | 10550 | 3.311110 | GGTGACTGTGAGCCGGGA | 61.311 | 66.667 | 2.18 | 0.00 | 0.00 | 5.14 |
5939 | 10568 | 2.181021 | GGTACGGGCTCACAGACG | 59.819 | 66.667 | 0.00 | 0.00 | 0.00 | 4.18 |
5940 | 10569 | 2.181021 | GTACGGGCTCACAGACGG | 59.819 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
5941 | 10570 | 3.755628 | TACGGGCTCACAGACGGC | 61.756 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
5944 | 10573 | 4.459089 | GGGCTCACAGACGGCCTC | 62.459 | 72.222 | 0.00 | 0.00 | 44.70 | 4.70 |
5945 | 10574 | 4.459089 | GGCTCACAGACGGCCTCC | 62.459 | 72.222 | 0.00 | 0.00 | 42.31 | 4.30 |
5946 | 10575 | 3.386237 | GCTCACAGACGGCCTCCT | 61.386 | 66.667 | 0.00 | 0.00 | 0.00 | 3.69 |
5947 | 10576 | 2.948720 | GCTCACAGACGGCCTCCTT | 61.949 | 63.158 | 0.00 | 0.00 | 0.00 | 3.36 |
5948 | 10577 | 1.216710 | CTCACAGACGGCCTCCTTC | 59.783 | 63.158 | 0.00 | 0.00 | 0.00 | 3.46 |
5949 | 10578 | 2.232298 | CTCACAGACGGCCTCCTTCC | 62.232 | 65.000 | 0.00 | 0.00 | 0.00 | 3.46 |
5950 | 10579 | 3.003763 | ACAGACGGCCTCCTTCCC | 61.004 | 66.667 | 0.00 | 0.00 | 0.00 | 3.97 |
5951 | 10580 | 3.003173 | CAGACGGCCTCCTTCCCA | 61.003 | 66.667 | 0.00 | 0.00 | 0.00 | 4.37 |
5952 | 10581 | 2.041265 | AGACGGCCTCCTTCCCAT | 59.959 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
5953 | 10582 | 2.066999 | AGACGGCCTCCTTCCCATC | 61.067 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
5954 | 10583 | 2.041265 | ACGGCCTCCTTCCCATCT | 59.959 | 61.111 | 0.00 | 0.00 | 0.00 | 2.90 |
5955 | 10584 | 2.034048 | GACGGCCTCCTTCCCATCTC | 62.034 | 65.000 | 0.00 | 0.00 | 0.00 | 2.75 |
5956 | 10585 | 2.812619 | CGGCCTCCTTCCCATCTCC | 61.813 | 68.421 | 0.00 | 0.00 | 0.00 | 3.71 |
5957 | 10586 | 2.456443 | GGCCTCCTTCCCATCTCCC | 61.456 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
5958 | 10587 | 1.385206 | GCCTCCTTCCCATCTCCCT | 60.385 | 63.158 | 0.00 | 0.00 | 0.00 | 4.20 |
5959 | 10588 | 0.990818 | GCCTCCTTCCCATCTCCCTT | 60.991 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
5960 | 10589 | 1.135960 | CCTCCTTCCCATCTCCCTTC | 58.864 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
5961 | 10590 | 1.344906 | CCTCCTTCCCATCTCCCTTCT | 60.345 | 57.143 | 0.00 | 0.00 | 0.00 | 2.85 |
5962 | 10591 | 2.046292 | CTCCTTCCCATCTCCCTTCTC | 58.954 | 57.143 | 0.00 | 0.00 | 0.00 | 2.87 |
5963 | 10592 | 1.135960 | CCTTCCCATCTCCCTTCTCC | 58.864 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
5964 | 10593 | 1.626350 | CCTTCCCATCTCCCTTCTCCA | 60.626 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
5965 | 10594 | 1.488393 | CTTCCCATCTCCCTTCTCCAC | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 4.02 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
5 | 6 | 3.052455 | TGCTCATGTAATCAACACCGT | 57.948 | 42.857 | 0.00 | 0.00 | 42.09 | 4.83 |
32 | 33 | 8.718158 | AGGTTAGGTAGGTTACTATGTAATCC | 57.282 | 38.462 | 0.00 | 0.00 | 0.00 | 3.01 |
61 | 62 | 6.115446 | CAGAACCAATCATTGCTTAGGACTA | 58.885 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
79 | 80 | 5.952526 | TTTTTCCGATTTAGACCAGAACC | 57.047 | 39.130 | 0.00 | 0.00 | 0.00 | 3.62 |
102 | 103 | 3.099905 | TCTTCATCTCGTGTCCCTGATT | 58.900 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
103 | 104 | 2.739943 | TCTTCATCTCGTGTCCCTGAT | 58.260 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
104 | 105 | 2.215942 | TCTTCATCTCGTGTCCCTGA | 57.784 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
105 | 106 | 2.493675 | TCTTCTTCATCTCGTGTCCCTG | 59.506 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
106 | 107 | 2.808919 | TCTTCTTCATCTCGTGTCCCT | 58.191 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
109 | 110 | 4.377839 | TCCATCTTCTTCATCTCGTGTC | 57.622 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
110 | 111 | 6.266330 | TCATATCCATCTTCTTCATCTCGTGT | 59.734 | 38.462 | 0.00 | 0.00 | 0.00 | 4.49 |
111 | 112 | 6.585702 | GTCATATCCATCTTCTTCATCTCGTG | 59.414 | 42.308 | 0.00 | 0.00 | 0.00 | 4.35 |
112 | 113 | 6.266330 | TGTCATATCCATCTTCTTCATCTCGT | 59.734 | 38.462 | 0.00 | 0.00 | 0.00 | 4.18 |
113 | 114 | 6.685657 | TGTCATATCCATCTTCTTCATCTCG | 58.314 | 40.000 | 0.00 | 0.00 | 0.00 | 4.04 |
114 | 115 | 7.064847 | GCATGTCATATCCATCTTCTTCATCTC | 59.935 | 40.741 | 0.00 | 0.00 | 0.00 | 2.75 |
129 | 130 | 1.066143 | CCCTACCCCGCATGTCATATC | 60.066 | 57.143 | 0.00 | 0.00 | 0.00 | 1.63 |
159 | 160 | 6.044054 | ACCCTGGACCTATTTAATAAGCTACC | 59.956 | 42.308 | 0.00 | 0.00 | 0.00 | 3.18 |
170 | 173 | 5.043762 | TCAATCCTAACCCTGGACCTATTT | 58.956 | 41.667 | 0.00 | 0.00 | 36.30 | 1.40 |
173 | 176 | 3.788116 | TCAATCCTAACCCTGGACCTA | 57.212 | 47.619 | 0.00 | 0.00 | 36.30 | 3.08 |
177 | 180 | 2.205342 | CCCTTCAATCCTAACCCTGGA | 58.795 | 52.381 | 0.00 | 0.00 | 38.06 | 3.86 |
178 | 181 | 1.215423 | CCCCTTCAATCCTAACCCTGG | 59.785 | 57.143 | 0.00 | 0.00 | 0.00 | 4.45 |
185 | 188 | 1.056660 | GCCGATCCCCTTCAATCCTA | 58.943 | 55.000 | 0.00 | 0.00 | 0.00 | 2.94 |
194 | 197 | 2.683465 | ATGTGCTTGCCGATCCCCT | 61.683 | 57.895 | 0.00 | 0.00 | 0.00 | 4.79 |
195 | 198 | 2.124151 | ATGTGCTTGCCGATCCCC | 60.124 | 61.111 | 0.00 | 0.00 | 0.00 | 4.81 |
240 | 244 | 1.916181 | AGGTCCATCGGAATCAAACCT | 59.084 | 47.619 | 0.00 | 0.00 | 31.38 | 3.50 |
259 | 263 | 8.669243 | TGCCAAAACAAACCTTAAATTTGTAAG | 58.331 | 29.630 | 14.65 | 0.00 | 46.88 | 2.34 |
260 | 264 | 8.451748 | GTGCCAAAACAAACCTTAAATTTGTAA | 58.548 | 29.630 | 14.65 | 0.00 | 46.88 | 2.41 |
264 | 268 | 7.637631 | ATGTGCCAAAACAAACCTTAAATTT | 57.362 | 28.000 | 0.00 | 0.00 | 32.81 | 1.82 |
267 | 271 | 6.623767 | GCAAATGTGCCAAAACAAACCTTAAA | 60.624 | 34.615 | 0.00 | 0.00 | 45.68 | 1.52 |
270 | 274 | 3.128415 | GCAAATGTGCCAAAACAAACCTT | 59.872 | 39.130 | 0.00 | 0.00 | 45.68 | 3.50 |
272 | 276 | 3.063670 | GCAAATGTGCCAAAACAAACC | 57.936 | 42.857 | 0.00 | 0.00 | 45.68 | 3.27 |
302 | 365 | 2.267351 | TGTCGTCGGTTCGGCCTTA | 61.267 | 57.895 | 0.00 | 0.00 | 34.35 | 2.69 |
304 | 367 | 4.353437 | GTGTCGTCGGTTCGGCCT | 62.353 | 66.667 | 0.00 | 0.00 | 34.35 | 5.19 |
311 | 374 | 2.114331 | CTCGTCACAGTGTCGTCGGT | 62.114 | 60.000 | 17.87 | 0.00 | 31.27 | 4.69 |
316 | 379 | 1.442857 | GCCTCTCGTCACAGTGTCG | 60.443 | 63.158 | 13.29 | 13.29 | 0.00 | 4.35 |
318 | 381 | 0.249489 | GTTGCCTCTCGTCACAGTGT | 60.249 | 55.000 | 0.00 | 0.00 | 0.00 | 3.55 |
320 | 383 | 0.464036 | TTGTTGCCTCTCGTCACAGT | 59.536 | 50.000 | 0.00 | 0.00 | 0.00 | 3.55 |
322 | 385 | 0.249868 | CCTTGTTGCCTCTCGTCACA | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.58 |
324 | 387 | 1.301716 | GCCTTGTTGCCTCTCGTCA | 60.302 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
327 | 390 | 2.357517 | ACGCCTTGTTGCCTCTCG | 60.358 | 61.111 | 0.00 | 0.00 | 0.00 | 4.04 |
330 | 393 | 2.594592 | ACCACGCCTTGTTGCCTC | 60.595 | 61.111 | 0.00 | 0.00 | 0.00 | 4.70 |
331 | 394 | 2.906897 | CACCACGCCTTGTTGCCT | 60.907 | 61.111 | 0.00 | 0.00 | 0.00 | 4.75 |
332 | 395 | 3.194272 | GACACCACGCCTTGTTGCC | 62.194 | 63.158 | 0.00 | 0.00 | 0.00 | 4.52 |
358 | 421 | 4.316823 | TCACTCCCAGCCCGTCCT | 62.317 | 66.667 | 0.00 | 0.00 | 0.00 | 3.85 |
361 | 424 | 4.640690 | AGGTCACTCCCAGCCCGT | 62.641 | 66.667 | 0.00 | 0.00 | 36.75 | 5.28 |
362 | 425 | 4.087892 | CAGGTCACTCCCAGCCCG | 62.088 | 72.222 | 0.00 | 0.00 | 36.75 | 6.13 |
364 | 427 | 1.977293 | GATCCAGGTCACTCCCAGCC | 61.977 | 65.000 | 0.00 | 0.00 | 36.75 | 4.85 |
368 | 431 | 2.435693 | CCGGATCCAGGTCACTCCC | 61.436 | 68.421 | 13.41 | 0.00 | 36.75 | 4.30 |
370 | 433 | 2.435693 | CCCCGGATCCAGGTCACTC | 61.436 | 68.421 | 13.22 | 0.00 | 0.00 | 3.51 |
373 | 436 | 1.689233 | CTTCCCCGGATCCAGGTCA | 60.689 | 63.158 | 13.22 | 0.00 | 0.00 | 4.02 |
376 | 439 | 2.797278 | CGTCTTCCCCGGATCCAGG | 61.797 | 68.421 | 13.41 | 10.21 | 0.00 | 4.45 |
385 | 448 | 3.110178 | CGTCGTTGCGTCTTCCCC | 61.110 | 66.667 | 0.00 | 0.00 | 0.00 | 4.81 |
394 | 457 | 2.723271 | TGTCGTCGTCGTCGTTGC | 60.723 | 61.111 | 11.41 | 4.80 | 38.33 | 4.17 |
397 | 460 | 4.360027 | CGGTGTCGTCGTCGTCGT | 62.360 | 66.667 | 11.41 | 0.00 | 38.33 | 4.34 |
400 | 463 | 3.720193 | CCTCGGTGTCGTCGTCGT | 61.720 | 66.667 | 1.33 | 0.00 | 38.33 | 4.34 |
404 | 467 | 3.812019 | CCTCCCTCGGTGTCGTCG | 61.812 | 72.222 | 0.00 | 0.00 | 37.69 | 5.12 |
405 | 468 | 3.450115 | CCCTCCCTCGGTGTCGTC | 61.450 | 72.222 | 0.00 | 0.00 | 37.69 | 4.20 |
407 | 470 | 4.753662 | TCCCCTCCCTCGGTGTCG | 62.754 | 72.222 | 0.00 | 0.00 | 37.82 | 4.35 |
414 | 477 | 0.761323 | GTCTTAGCCTCCCCTCCCTC | 60.761 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
415 | 478 | 1.232461 | AGTCTTAGCCTCCCCTCCCT | 61.232 | 60.000 | 0.00 | 0.00 | 0.00 | 4.20 |
416 | 479 | 0.326713 | AAGTCTTAGCCTCCCCTCCC | 60.327 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
426 | 489 | 3.132467 | ACCCCGAACTATCAAGTCTTAGC | 59.868 | 47.826 | 0.00 | 0.00 | 33.75 | 3.09 |
437 | 500 | 1.764854 | ATCCCGCACCCCGAACTAT | 60.765 | 57.895 | 0.00 | 0.00 | 40.02 | 2.12 |
438 | 501 | 2.364579 | ATCCCGCACCCCGAACTA | 60.365 | 61.111 | 0.00 | 0.00 | 40.02 | 2.24 |
439 | 502 | 4.096003 | CATCCCGCACCCCGAACT | 62.096 | 66.667 | 0.00 | 0.00 | 40.02 | 3.01 |
454 | 518 | 1.152652 | TTTGGCACCGACAACCCAT | 60.153 | 52.632 | 0.00 | 0.00 | 26.20 | 4.00 |
459 | 523 | 1.407258 | CCTTTTCTTTGGCACCGACAA | 59.593 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
469 | 533 | 5.124457 | ACCATCATCGTCATCCTTTTCTTTG | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 2.77 |
470 | 534 | 5.124457 | CACCATCATCGTCATCCTTTTCTTT | 59.876 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
471 | 535 | 4.637534 | CACCATCATCGTCATCCTTTTCTT | 59.362 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
484 | 548 | 1.451927 | CCCACCACCACCATCATCG | 60.452 | 63.158 | 0.00 | 0.00 | 0.00 | 3.84 |
486 | 550 | 0.549902 | TCTCCCACCACCACCATCAT | 60.550 | 55.000 | 0.00 | 0.00 | 0.00 | 2.45 |
487 | 551 | 0.770166 | TTCTCCCACCACCACCATCA | 60.770 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 |
490 | 554 | 1.715019 | CCTTTCTCCCACCACCACCA | 61.715 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
499 | 563 | 1.307866 | CTAGGCCCCCTTTCTCCCA | 60.308 | 63.158 | 0.00 | 0.00 | 34.61 | 4.37 |
503 | 567 | 0.421904 | TTCCTCTAGGCCCCCTTTCT | 59.578 | 55.000 | 0.00 | 0.00 | 34.61 | 2.52 |
505 | 569 | 1.299939 | CTTTCCTCTAGGCCCCCTTT | 58.700 | 55.000 | 0.00 | 0.00 | 34.61 | 3.11 |
525 | 589 | 2.537401 | GTCATGTTGCTACTACCCGAC | 58.463 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
573 | 644 | 2.475466 | AATCCAATGCTGCCGCTCG | 61.475 | 57.895 | 0.70 | 0.00 | 36.97 | 5.03 |
575 | 646 | 1.378911 | TCAATCCAATGCTGCCGCT | 60.379 | 52.632 | 0.70 | 0.00 | 36.97 | 5.52 |
577 | 648 | 0.099968 | CACTCAATCCAATGCTGCCG | 59.900 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
578 | 649 | 0.458669 | CCACTCAATCCAATGCTGCC | 59.541 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
579 | 650 | 0.458669 | CCCACTCAATCCAATGCTGC | 59.541 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
587 | 675 | 2.619074 | CCTTCTTCCACCCACTCAATCC | 60.619 | 54.545 | 0.00 | 0.00 | 0.00 | 3.01 |
593 | 681 | 0.178873 | TAGCCCTTCTTCCACCCACT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
594 | 682 | 0.253327 | CTAGCCCTTCTTCCACCCAC | 59.747 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
605 | 693 | 0.031616 | CTCTCCCTCCACTAGCCCTT | 60.032 | 60.000 | 0.00 | 0.00 | 0.00 | 3.95 |
607 | 695 | 1.458588 | CCTCTCCCTCCACTAGCCC | 60.459 | 68.421 | 0.00 | 0.00 | 0.00 | 5.19 |
608 | 696 | 0.325765 | AACCTCTCCCTCCACTAGCC | 60.326 | 60.000 | 0.00 | 0.00 | 0.00 | 3.93 |
609 | 697 | 2.033372 | GTAACCTCTCCCTCCACTAGC | 58.967 | 57.143 | 0.00 | 0.00 | 0.00 | 3.42 |
610 | 698 | 3.383698 | TGTAACCTCTCCCTCCACTAG | 57.616 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
611 | 699 | 3.271225 | TCATGTAACCTCTCCCTCCACTA | 59.729 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
612 | 700 | 2.044492 | TCATGTAACCTCTCCCTCCACT | 59.956 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
614 | 702 | 2.044492 | ACTCATGTAACCTCTCCCTCCA | 59.956 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
618 | 706 | 2.100989 | ACGACTCATGTAACCTCTCCC | 58.899 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
620 | 708 | 4.436242 | TCAACGACTCATGTAACCTCTC | 57.564 | 45.455 | 0.00 | 0.00 | 0.00 | 3.20 |
622 | 710 | 6.481954 | AAATTCAACGACTCATGTAACCTC | 57.518 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
623 | 711 | 7.972832 | TTAAATTCAACGACTCATGTAACCT | 57.027 | 32.000 | 0.00 | 0.00 | 0.00 | 3.50 |
624 | 712 | 9.274065 | GATTTAAATTCAACGACTCATGTAACC | 57.726 | 33.333 | 1.43 | 0.00 | 0.00 | 2.85 |
626 | 714 | 8.927721 | TCGATTTAAATTCAACGACTCATGTAA | 58.072 | 29.630 | 1.43 | 0.00 | 0.00 | 2.41 |
627 | 715 | 8.468720 | TCGATTTAAATTCAACGACTCATGTA | 57.531 | 30.769 | 1.43 | 0.00 | 0.00 | 2.29 |
628 | 716 | 7.359262 | TCGATTTAAATTCAACGACTCATGT | 57.641 | 32.000 | 1.43 | 0.00 | 0.00 | 3.21 |
629 | 717 | 7.046251 | CGTTCGATTTAAATTCAACGACTCATG | 60.046 | 37.037 | 26.19 | 10.28 | 36.57 | 3.07 |
630 | 718 | 6.953743 | CGTTCGATTTAAATTCAACGACTCAT | 59.046 | 34.615 | 26.19 | 0.00 | 36.57 | 2.90 |
631 | 719 | 6.293618 | CGTTCGATTTAAATTCAACGACTCA | 58.706 | 36.000 | 26.19 | 7.41 | 36.57 | 3.41 |
632 | 720 | 5.726679 | CCGTTCGATTTAAATTCAACGACTC | 59.273 | 40.000 | 29.15 | 16.70 | 36.57 | 3.36 |
633 | 721 | 5.614760 | CCGTTCGATTTAAATTCAACGACT | 58.385 | 37.500 | 29.15 | 0.73 | 36.57 | 4.18 |
634 | 722 | 4.259046 | GCCGTTCGATTTAAATTCAACGAC | 59.741 | 41.667 | 29.15 | 21.45 | 36.57 | 4.34 |
635 | 723 | 4.152759 | AGCCGTTCGATTTAAATTCAACGA | 59.847 | 37.500 | 29.15 | 19.61 | 36.57 | 3.85 |
636 | 724 | 4.399978 | AGCCGTTCGATTTAAATTCAACG | 58.600 | 39.130 | 24.73 | 24.73 | 35.35 | 4.10 |
637 | 725 | 7.784790 | TTTAGCCGTTCGATTTAAATTCAAC | 57.215 | 32.000 | 1.43 | 7.47 | 0.00 | 3.18 |
638 | 726 | 8.798748 | TTTTTAGCCGTTCGATTTAAATTCAA | 57.201 | 26.923 | 1.43 | 0.00 | 0.00 | 2.69 |
692 | 780 | 5.861787 | GCACAATTAACGCCTATCACTTTTT | 59.138 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
693 | 781 | 5.399013 | GCACAATTAACGCCTATCACTTTT | 58.601 | 37.500 | 0.00 | 0.00 | 0.00 | 2.27 |
694 | 782 | 4.436852 | CGCACAATTAACGCCTATCACTTT | 60.437 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
695 | 783 | 3.063452 | CGCACAATTAACGCCTATCACTT | 59.937 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
696 | 784 | 2.607635 | CGCACAATTAACGCCTATCACT | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
697 | 785 | 2.350498 | ACGCACAATTAACGCCTATCAC | 59.650 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
698 | 786 | 2.623535 | ACGCACAATTAACGCCTATCA | 58.376 | 42.857 | 0.00 | 0.00 | 0.00 | 2.15 |
699 | 787 | 3.668596 | AACGCACAATTAACGCCTATC | 57.331 | 42.857 | 0.00 | 0.00 | 0.00 | 2.08 |
700 | 788 | 4.162812 | CAAAACGCACAATTAACGCCTAT | 58.837 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
701 | 789 | 3.556513 | CAAAACGCACAATTAACGCCTA | 58.443 | 40.909 | 0.00 | 0.00 | 0.00 | 3.93 |
702 | 790 | 2.389998 | CAAAACGCACAATTAACGCCT | 58.610 | 42.857 | 0.00 | 0.00 | 0.00 | 5.52 |
703 | 791 | 1.136748 | GCAAAACGCACAATTAACGCC | 60.137 | 47.619 | 0.00 | 0.00 | 41.79 | 5.68 |
704 | 792 | 1.136748 | GGCAAAACGCACAATTAACGC | 60.137 | 47.619 | 0.00 | 0.00 | 45.17 | 4.84 |
705 | 793 | 2.097637 | GTGGCAAAACGCACAATTAACG | 60.098 | 45.455 | 0.00 | 0.00 | 45.17 | 3.18 |
706 | 794 | 2.219903 | GGTGGCAAAACGCACAATTAAC | 59.780 | 45.455 | 0.00 | 0.00 | 45.17 | 2.01 |
707 | 795 | 2.474816 | GGTGGCAAAACGCACAATTAA | 58.525 | 42.857 | 0.00 | 0.00 | 45.17 | 1.40 |
708 | 796 | 1.600663 | CGGTGGCAAAACGCACAATTA | 60.601 | 47.619 | 0.00 | 0.00 | 45.17 | 1.40 |
709 | 797 | 0.873743 | CGGTGGCAAAACGCACAATT | 60.874 | 50.000 | 0.00 | 0.00 | 45.17 | 2.32 |
710 | 798 | 1.299773 | CGGTGGCAAAACGCACAAT | 60.300 | 52.632 | 0.00 | 0.00 | 45.17 | 2.71 |
711 | 799 | 2.103143 | CGGTGGCAAAACGCACAA | 59.897 | 55.556 | 0.00 | 0.00 | 45.17 | 3.33 |
716 | 804 | 2.354539 | CAAGGCGGTGGCAAAACG | 60.355 | 61.111 | 0.00 | 0.00 | 42.47 | 3.60 |
717 | 805 | 2.661537 | GCAAGGCGGTGGCAAAAC | 60.662 | 61.111 | 0.00 | 0.00 | 42.47 | 2.43 |
728 | 816 | 1.234615 | TGGTCAGTAAAGCGCAAGGC | 61.235 | 55.000 | 11.47 | 0.00 | 44.05 | 4.35 |
729 | 817 | 1.234821 | TTGGTCAGTAAAGCGCAAGG | 58.765 | 50.000 | 11.47 | 0.00 | 38.28 | 3.61 |
730 | 818 | 2.921126 | CTTTGGTCAGTAAAGCGCAAG | 58.079 | 47.619 | 11.47 | 0.00 | 43.44 | 4.01 |
736 | 824 | 2.855180 | CATGCGCTTTGGTCAGTAAAG | 58.145 | 47.619 | 9.73 | 0.00 | 38.00 | 1.85 |
737 | 825 | 1.068610 | GCATGCGCTTTGGTCAGTAAA | 60.069 | 47.619 | 9.73 | 0.00 | 34.30 | 2.01 |
738 | 826 | 0.521291 | GCATGCGCTTTGGTCAGTAA | 59.479 | 50.000 | 9.73 | 0.00 | 34.30 | 2.24 |
739 | 827 | 2.170738 | GCATGCGCTTTGGTCAGTA | 58.829 | 52.632 | 9.73 | 0.00 | 34.30 | 2.74 |
740 | 828 | 2.956987 | GCATGCGCTTTGGTCAGT | 59.043 | 55.556 | 9.73 | 0.00 | 34.30 | 3.41 |
753 | 841 | 2.313234 | GCATAACTGCGCATAAGCATG | 58.687 | 47.619 | 12.24 | 11.51 | 46.97 | 4.06 |
754 | 842 | 2.693797 | GCATAACTGCGCATAAGCAT | 57.306 | 45.000 | 12.24 | 0.00 | 46.97 | 3.79 |
763 | 851 | 4.550744 | CGCATTAATATGTGCATAACTGCG | 59.449 | 41.667 | 17.52 | 17.52 | 40.55 | 5.18 |
764 | 852 | 5.451908 | ACGCATTAATATGTGCATAACTGC | 58.548 | 37.500 | 0.00 | 0.00 | 44.35 | 4.40 |
767 | 855 | 9.194716 | CGTATTACGCATTAATATGTGCATAAC | 57.805 | 33.333 | 2.88 | 0.00 | 44.35 | 1.89 |
768 | 856 | 8.927721 | ACGTATTACGCATTAATATGTGCATAA | 58.072 | 29.630 | 15.81 | 4.59 | 45.41 | 1.90 |
769 | 857 | 8.468720 | ACGTATTACGCATTAATATGTGCATA | 57.531 | 30.769 | 15.81 | 0.00 | 45.41 | 3.14 |
770 | 858 | 7.359262 | ACGTATTACGCATTAATATGTGCAT | 57.641 | 32.000 | 15.81 | 0.00 | 45.41 | 3.96 |
771 | 859 | 6.772770 | ACGTATTACGCATTAATATGTGCA | 57.227 | 33.333 | 15.81 | 0.00 | 45.41 | 4.57 |
772 | 860 | 8.406716 | CAAAACGTATTACGCATTAATATGTGC | 58.593 | 33.333 | 15.81 | 0.00 | 46.00 | 4.57 |
773 | 861 | 8.406716 | GCAAAACGTATTACGCATTAATATGTG | 58.593 | 33.333 | 15.81 | 6.99 | 46.00 | 3.21 |
784 | 872 | 3.828677 | GCGTTGGCAAAACGTATTACGC | 61.829 | 50.000 | 20.60 | 11.90 | 44.69 | 4.42 |
785 | 873 | 1.899971 | GCGTTGGCAAAACGTATTACG | 59.100 | 47.619 | 20.60 | 14.41 | 44.69 | 3.18 |
786 | 874 | 2.095617 | AGGCGTTGGCAAAACGTATTAC | 60.096 | 45.455 | 20.60 | 7.53 | 44.69 | 1.89 |
787 | 875 | 2.152830 | AGGCGTTGGCAAAACGTATTA | 58.847 | 42.857 | 20.60 | 0.00 | 44.69 | 0.98 |
788 | 876 | 0.955905 | AGGCGTTGGCAAAACGTATT | 59.044 | 45.000 | 20.60 | 7.93 | 44.69 | 1.89 |
789 | 877 | 1.735571 | CTAGGCGTTGGCAAAACGTAT | 59.264 | 47.619 | 20.60 | 13.75 | 44.69 | 3.06 |
790 | 878 | 1.149987 | CTAGGCGTTGGCAAAACGTA | 58.850 | 50.000 | 20.60 | 7.95 | 44.69 | 3.57 |
791 | 879 | 0.533308 | TCTAGGCGTTGGCAAAACGT | 60.533 | 50.000 | 20.60 | 7.26 | 44.69 | 3.99 |
792 | 880 | 0.165944 | CTCTAGGCGTTGGCAAAACG | 59.834 | 55.000 | 16.88 | 16.88 | 45.56 | 3.60 |
793 | 881 | 0.109735 | GCTCTAGGCGTTGGCAAAAC | 60.110 | 55.000 | 0.00 | 0.00 | 42.47 | 2.43 |
794 | 882 | 1.241315 | GGCTCTAGGCGTTGGCAAAA | 61.241 | 55.000 | 0.00 | 0.00 | 42.47 | 2.44 |
795 | 883 | 1.674322 | GGCTCTAGGCGTTGGCAAA | 60.674 | 57.895 | 0.00 | 0.00 | 42.47 | 3.68 |
796 | 884 | 1.261938 | TAGGCTCTAGGCGTTGGCAA | 61.262 | 55.000 | 0.00 | 0.00 | 46.23 | 4.52 |
797 | 885 | 1.261938 | TTAGGCTCTAGGCGTTGGCA | 61.262 | 55.000 | 0.00 | 0.00 | 46.23 | 4.92 |
798 | 886 | 0.530870 | CTTAGGCTCTAGGCGTTGGC | 60.531 | 60.000 | 0.00 | 0.00 | 46.23 | 4.52 |
799 | 887 | 0.530870 | GCTTAGGCTCTAGGCGTTGG | 60.531 | 60.000 | 0.00 | 0.89 | 46.23 | 3.77 |
800 | 888 | 0.872021 | CGCTTAGGCTCTAGGCGTTG | 60.872 | 60.000 | 21.94 | 0.09 | 46.23 | 4.10 |
801 | 889 | 1.437986 | CGCTTAGGCTCTAGGCGTT | 59.562 | 57.895 | 21.94 | 0.00 | 46.23 | 4.84 |
802 | 890 | 3.121019 | CGCTTAGGCTCTAGGCGT | 58.879 | 61.111 | 21.94 | 0.00 | 46.23 | 5.68 |
804 | 892 | 2.355244 | CGCGCTTAGGCTCTAGGC | 60.355 | 66.667 | 5.56 | 6.34 | 41.43 | 3.93 |
805 | 893 | 2.355244 | GCGCGCTTAGGCTCTAGG | 60.355 | 66.667 | 26.67 | 0.00 | 36.09 | 3.02 |
806 | 894 | 2.727647 | CGCGCGCTTAGGCTCTAG | 60.728 | 66.667 | 30.48 | 5.07 | 36.09 | 2.43 |
807 | 895 | 4.925576 | GCGCGCGCTTAGGCTCTA | 62.926 | 66.667 | 44.38 | 0.00 | 38.26 | 2.43 |
821 | 909 | 0.796927 | AAAAAGACGAGCCTAAGCGC | 59.203 | 50.000 | 0.00 | 0.00 | 46.67 | 5.92 |
852 | 940 | 8.500773 | CCGACTATAGTTAAGTTGCTTGAAAAA | 58.499 | 33.333 | 6.88 | 0.00 | 0.00 | 1.94 |
853 | 941 | 7.360607 | GCCGACTATAGTTAAGTTGCTTGAAAA | 60.361 | 37.037 | 6.88 | 0.00 | 0.00 | 2.29 |
854 | 942 | 6.091713 | GCCGACTATAGTTAAGTTGCTTGAAA | 59.908 | 38.462 | 6.88 | 0.00 | 0.00 | 2.69 |
855 | 943 | 5.579511 | GCCGACTATAGTTAAGTTGCTTGAA | 59.420 | 40.000 | 6.88 | 0.00 | 0.00 | 2.69 |
856 | 944 | 5.107133 | GCCGACTATAGTTAAGTTGCTTGA | 58.893 | 41.667 | 6.88 | 0.00 | 0.00 | 3.02 |
897 | 985 | 1.142060 | TGTGAGTTTGGTTCACCGGAT | 59.858 | 47.619 | 9.46 | 0.00 | 43.32 | 4.18 |
951 | 1076 | 3.320879 | CTGGCTGCCGTGACAGGAT | 62.321 | 63.158 | 14.98 | 0.00 | 38.16 | 3.24 |
954 | 1079 | 2.740055 | GACTGGCTGCCGTGACAG | 60.740 | 66.667 | 18.25 | 10.58 | 40.80 | 3.51 |
968 | 1093 | 2.101582 | GTGGTCACTTCACTGACTGACT | 59.898 | 50.000 | 12.72 | 0.00 | 40.50 | 3.41 |
970 | 1095 | 2.101415 | CTGTGGTCACTTCACTGACTGA | 59.899 | 50.000 | 2.66 | 0.00 | 40.50 | 3.41 |
984 | 1120 | 0.593128 | GCATTGTGTGGTCTGTGGTC | 59.407 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1278 | 1415 | 2.612095 | AAACGTGGAGGCACCCGAAA | 62.612 | 55.000 | 15.95 | 0.00 | 38.00 | 3.46 |
1314 | 1451 | 3.604494 | ATTGTGCTCGACGACGCGA | 62.604 | 57.895 | 15.93 | 12.44 | 39.58 | 5.87 |
1357 | 1494 | 1.066587 | CAACCAAGCGCCGGAAAAA | 59.933 | 52.632 | 19.66 | 0.00 | 0.00 | 1.94 |
1358 | 1495 | 1.668101 | AACAACCAAGCGCCGGAAAA | 61.668 | 50.000 | 19.66 | 0.00 | 0.00 | 2.29 |
1369 | 1506 | 5.588648 | CACTTCAGTTAGAGGAAACAACCAA | 59.411 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1386 | 1523 | 2.905075 | TCACAACCTCACACACTTCAG | 58.095 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
1419 | 1556 | 1.962807 | CTCCACACCCAAGAATGCAAA | 59.037 | 47.619 | 0.00 | 0.00 | 0.00 | 3.68 |
1589 | 1729 | 1.066152 | CGATGAGGATTCTGCAGTCGA | 59.934 | 52.381 | 14.67 | 1.43 | 0.00 | 4.20 |
1652 | 1802 | 1.064240 | AGCATTCACATCTCATGGCCA | 60.064 | 47.619 | 8.56 | 8.56 | 33.60 | 5.36 |
1769 | 1920 | 1.764571 | GCCTACCCACACTGACCACA | 61.765 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1860 | 2011 | 5.721960 | ACCTATTGTATCACTGAGGACAAGT | 59.278 | 40.000 | 12.48 | 5.43 | 35.41 | 3.16 |
1945 | 2104 | 1.076485 | ATCCATGTCCTTGCCCAGC | 60.076 | 57.895 | 0.00 | 0.00 | 0.00 | 4.85 |
1981 | 2140 | 1.207329 | GTCTGGGCGTAGGAAACAGAT | 59.793 | 52.381 | 0.00 | 0.00 | 39.97 | 2.90 |
2360 | 2524 | 1.106285 | GCATCCCAACCAGCCTAAAG | 58.894 | 55.000 | 0.00 | 0.00 | 0.00 | 1.85 |
2495 | 2659 | 2.485479 | GCATATATATCAGGGGGTGCCG | 60.485 | 54.545 | 0.00 | 0.00 | 0.00 | 5.69 |
2617 | 4221 | 5.500234 | ACTCAAATTAGCTAGACATTGCCA | 58.500 | 37.500 | 0.00 | 0.00 | 0.00 | 4.92 |
2723 | 4328 | 2.048603 | GCAGTGCCACCCCAATCTC | 61.049 | 63.158 | 2.85 | 0.00 | 0.00 | 2.75 |
2869 | 4489 | 9.830186 | AACCAGATCTGTAACCTCACTATATAT | 57.170 | 33.333 | 21.11 | 0.00 | 0.00 | 0.86 |
2870 | 4490 | 9.078990 | CAACCAGATCTGTAACCTCACTATATA | 57.921 | 37.037 | 21.11 | 0.00 | 0.00 | 0.86 |
2871 | 4491 | 7.015682 | CCAACCAGATCTGTAACCTCACTATAT | 59.984 | 40.741 | 21.11 | 0.00 | 0.00 | 0.86 |
2872 | 4492 | 6.323996 | CCAACCAGATCTGTAACCTCACTATA | 59.676 | 42.308 | 21.11 | 0.00 | 0.00 | 1.31 |
2873 | 4493 | 5.129485 | CCAACCAGATCTGTAACCTCACTAT | 59.871 | 44.000 | 21.11 | 0.00 | 0.00 | 2.12 |
2874 | 4494 | 4.466370 | CCAACCAGATCTGTAACCTCACTA | 59.534 | 45.833 | 21.11 | 0.00 | 0.00 | 2.74 |
2875 | 4495 | 3.261897 | CCAACCAGATCTGTAACCTCACT | 59.738 | 47.826 | 21.11 | 0.00 | 0.00 | 3.41 |
2876 | 4496 | 3.260884 | TCCAACCAGATCTGTAACCTCAC | 59.739 | 47.826 | 21.11 | 0.00 | 0.00 | 3.51 |
2919 | 4539 | 6.248433 | TGAAGCATTTAGAAATTCCACTCCT | 58.752 | 36.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3102 | 4749 | 2.991866 | GTGGTCTAAGTGCTACCGAAAC | 59.008 | 50.000 | 0.00 | 0.00 | 35.98 | 2.78 |
3181 | 4828 | 1.681264 | ACAGCCAAGCAGGTTAACAAC | 59.319 | 47.619 | 8.10 | 0.00 | 40.61 | 3.32 |
3208 | 4856 | 9.899226 | CTGAACTTAGGATTTGTCCTTAAAAAG | 57.101 | 33.333 | 1.81 | 3.20 | 41.12 | 2.27 |
3251 | 4899 | 5.047306 | CCCTGGATCGATAATGCTACACTTA | 60.047 | 44.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3252 | 4900 | 4.262635 | CCCTGGATCGATAATGCTACACTT | 60.263 | 45.833 | 0.00 | 0.00 | 0.00 | 3.16 |
3316 | 4969 | 7.472761 | TGGCTAACCCTCTCCATTTTGGAAA | 62.473 | 44.000 | 0.00 | 0.00 | 40.08 | 3.13 |
3436 | 5092 | 2.270352 | TGGGAGTGCTTACAGTTTGG | 57.730 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
3455 | 5139 | 9.898152 | TTTTTCTGATGGAACTTTTGGTATTTT | 57.102 | 25.926 | 0.00 | 0.00 | 33.13 | 1.82 |
3472 | 5156 | 7.502060 | TGTCTAGGGAGAATCTTTTTCTGAT | 57.498 | 36.000 | 0.00 | 0.00 | 31.96 | 2.90 |
3507 | 5191 | 6.204688 | TGCTCCACATTAGTAACTCAAAACTG | 59.795 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
3552 | 5236 | 9.082313 | GTTCCATATGAAGTTGGGATCAATTAT | 57.918 | 33.333 | 3.65 | 0.00 | 35.10 | 1.28 |
3802 | 5488 | 7.329588 | TCATCATAGAGTTTCTGTTACGCTA | 57.670 | 36.000 | 0.00 | 0.00 | 33.47 | 4.26 |
3803 | 5489 | 6.208988 | TCATCATAGAGTTTCTGTTACGCT | 57.791 | 37.500 | 0.00 | 0.00 | 0.00 | 5.07 |
3804 | 5490 | 7.470289 | AATCATCATAGAGTTTCTGTTACGC | 57.530 | 36.000 | 0.00 | 0.00 | 0.00 | 4.42 |
3992 | 5679 | 4.750598 | GGAGACGACTTATATTTCCCTTGC | 59.249 | 45.833 | 0.00 | 0.00 | 0.00 | 4.01 |
4026 | 5713 | 4.526650 | TGATGCTTACTCATCCCGCTAATA | 59.473 | 41.667 | 1.84 | 0.00 | 41.54 | 0.98 |
4322 | 6011 | 8.535335 | ACTAGCAGAACAGATAAAGAATCAAGA | 58.465 | 33.333 | 0.00 | 0.00 | 37.03 | 3.02 |
4337 | 6026 | 6.705302 | AGATGAATCTTGAACTAGCAGAACA | 58.295 | 36.000 | 0.00 | 0.00 | 31.97 | 3.18 |
4386 | 6075 | 4.080695 | AGAGAGCAAAATCTATGAGCACCA | 60.081 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
4442 | 6137 | 9.638176 | AAGGCTATTCATAAAAGAAGACATGAT | 57.362 | 29.630 | 0.00 | 0.00 | 0.00 | 2.45 |
4482 | 6182 | 3.019564 | AGTGCAAACAAGTGAGCTTCTT | 58.980 | 40.909 | 0.00 | 0.00 | 31.49 | 2.52 |
4483 | 6183 | 2.648059 | AGTGCAAACAAGTGAGCTTCT | 58.352 | 42.857 | 0.00 | 0.00 | 31.49 | 2.85 |
4492 | 6192 | 1.067635 | GTGGCCCATAGTGCAAACAAG | 60.068 | 52.381 | 0.00 | 0.00 | 0.00 | 3.16 |
4638 | 9091 | 6.764560 | ACCAAATTATCAATACGGAGGTGTAC | 59.235 | 38.462 | 0.00 | 0.00 | 0.00 | 2.90 |
4803 | 9256 | 2.554893 | GACCGTAAGCCAACAATCCAAA | 59.445 | 45.455 | 0.00 | 0.00 | 0.00 | 3.28 |
4868 | 9321 | 4.455533 | TCGACAAGGAGACCATCAAATTTG | 59.544 | 41.667 | 12.15 | 12.15 | 0.00 | 2.32 |
4881 | 9334 | 1.817099 | GCCAGCCATCGACAAGGAG | 60.817 | 63.158 | 4.68 | 0.00 | 0.00 | 3.69 |
5111 | 9565 | 3.355378 | TCCGCTTCATTTGATGGACATT | 58.645 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
5140 | 9597 | 0.321653 | AATCACTTGGACGAGCCCAC | 60.322 | 55.000 | 0.00 | 0.00 | 35.62 | 4.61 |
5144 | 9601 | 3.062639 | CACATACAATCACTTGGACGAGC | 59.937 | 47.826 | 0.00 | 0.00 | 36.64 | 5.03 |
5165 | 9622 | 3.560105 | TGTGACCATTGGATTGTCAACA | 58.440 | 40.909 | 10.37 | 1.77 | 40.41 | 3.33 |
5173 | 9631 | 2.795329 | GTCCAGTTGTGACCATTGGAT | 58.205 | 47.619 | 10.37 | 0.00 | 37.18 | 3.41 |
5448 | 10042 | 2.684655 | CCCAACCATGCCCCAAGG | 60.685 | 66.667 | 0.00 | 0.00 | 0.00 | 3.61 |
5567 | 10172 | 1.007038 | CGTCGTCCGTTCTTCCCAA | 60.007 | 57.895 | 0.00 | 0.00 | 0.00 | 4.12 |
5568 | 10173 | 2.646719 | CGTCGTCCGTTCTTCCCA | 59.353 | 61.111 | 0.00 | 0.00 | 0.00 | 4.37 |
5656 | 10282 | 0.321671 | CAAGCTCCGGTTCTCCTTCA | 59.678 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5660 | 10286 | 1.446272 | CGACAAGCTCCGGTTCTCC | 60.446 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
5661 | 10287 | 0.038526 | TTCGACAAGCTCCGGTTCTC | 60.039 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
5662 | 10288 | 0.038159 | CTTCGACAAGCTCCGGTTCT | 60.038 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
5664 | 10290 | 0.608640 | ATCTTCGACAAGCTCCGGTT | 59.391 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
5665 | 10291 | 0.108615 | CATCTTCGACAAGCTCCGGT | 60.109 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
5666 | 10292 | 0.173481 | TCATCTTCGACAAGCTCCGG | 59.827 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
5667 | 10293 | 1.923204 | CTTCATCTTCGACAAGCTCCG | 59.077 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
5668 | 10294 | 2.093973 | TCCTTCATCTTCGACAAGCTCC | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
5669 | 10295 | 3.119316 | TCTCCTTCATCTTCGACAAGCTC | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 4.09 |
5670 | 10296 | 2.828520 | TCTCCTTCATCTTCGACAAGCT | 59.171 | 45.455 | 0.00 | 0.00 | 0.00 | 3.74 |
5671 | 10297 | 3.238108 | TCTCCTTCATCTTCGACAAGC | 57.762 | 47.619 | 0.00 | 0.00 | 0.00 | 4.01 |
5672 | 10298 | 3.929610 | GGTTCTCCTTCATCTTCGACAAG | 59.070 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
5673 | 10299 | 3.614150 | CGGTTCTCCTTCATCTTCGACAA | 60.614 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
5674 | 10300 | 2.094700 | CGGTTCTCCTTCATCTTCGACA | 60.095 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
5675 | 10301 | 2.531206 | CGGTTCTCCTTCATCTTCGAC | 58.469 | 52.381 | 0.00 | 0.00 | 0.00 | 4.20 |
5676 | 10302 | 1.476891 | CCGGTTCTCCTTCATCTTCGA | 59.523 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
5677 | 10303 | 1.476891 | TCCGGTTCTCCTTCATCTTCG | 59.523 | 52.381 | 0.00 | 0.00 | 0.00 | 3.79 |
5678 | 10304 | 2.740256 | GCTCCGGTTCTCCTTCATCTTC | 60.740 | 54.545 | 0.00 | 0.00 | 0.00 | 2.87 |
5679 | 10305 | 1.208293 | GCTCCGGTTCTCCTTCATCTT | 59.792 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
5680 | 10306 | 0.827368 | GCTCCGGTTCTCCTTCATCT | 59.173 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
5681 | 10307 | 0.827368 | AGCTCCGGTTCTCCTTCATC | 59.173 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
5682 | 10308 | 1.065854 | CAAGCTCCGGTTCTCCTTCAT | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 2.57 |
5683 | 10309 | 0.321671 | CAAGCTCCGGTTCTCCTTCA | 59.678 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5684 | 10310 | 0.321996 | ACAAGCTCCGGTTCTCCTTC | 59.678 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
5685 | 10311 | 0.321996 | GACAAGCTCCGGTTCTCCTT | 59.678 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
5686 | 10312 | 1.878656 | CGACAAGCTCCGGTTCTCCT | 61.879 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
5687 | 10313 | 1.446272 | CGACAAGCTCCGGTTCTCC | 60.446 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
5715 | 10341 | 1.115930 | AGTTCTCTGCCTCCGTGTGT | 61.116 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
5717 | 10343 | 0.827925 | TCAGTTCTCTGCCTCCGTGT | 60.828 | 55.000 | 0.00 | 0.00 | 41.10 | 4.49 |
5727 | 10353 | 3.694072 | CCGTCATCTTCTCTCAGTTCTCT | 59.306 | 47.826 | 0.00 | 0.00 | 0.00 | 3.10 |
5728 | 10354 | 3.442273 | ACCGTCATCTTCTCTCAGTTCTC | 59.558 | 47.826 | 0.00 | 0.00 | 0.00 | 2.87 |
5729 | 10355 | 3.192422 | CACCGTCATCTTCTCTCAGTTCT | 59.808 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
5730 | 10356 | 3.191581 | TCACCGTCATCTTCTCTCAGTTC | 59.808 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
5731 | 10357 | 3.157881 | TCACCGTCATCTTCTCTCAGTT | 58.842 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
5732 | 10358 | 2.752354 | CTCACCGTCATCTTCTCTCAGT | 59.248 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5733 | 10359 | 2.098934 | CCTCACCGTCATCTTCTCTCAG | 59.901 | 54.545 | 0.00 | 0.00 | 0.00 | 3.35 |
5734 | 10360 | 2.095461 | CCTCACCGTCATCTTCTCTCA | 58.905 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
5735 | 10361 | 2.098443 | GTCCTCACCGTCATCTTCTCTC | 59.902 | 54.545 | 0.00 | 0.00 | 0.00 | 3.20 |
5736 | 10362 | 2.096248 | GTCCTCACCGTCATCTTCTCT | 58.904 | 52.381 | 0.00 | 0.00 | 0.00 | 3.10 |
5750 | 10376 | 0.524816 | GCGCTTAATCGTCGTCCTCA | 60.525 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
5755 | 10381 | 3.252484 | GGCGCGCTTAATCGTCGT | 61.252 | 61.111 | 32.29 | 0.00 | 33.80 | 4.34 |
5898 | 10527 | 4.363990 | CTCACAGTCACCGCGGCT | 62.364 | 66.667 | 28.58 | 12.20 | 0.00 | 5.52 |
5903 | 10532 | 4.742201 | CCCGGCTCACAGTCACCG | 62.742 | 72.222 | 0.00 | 0.00 | 45.21 | 4.94 |
5904 | 10533 | 3.302347 | CTCCCGGCTCACAGTCACC | 62.302 | 68.421 | 0.00 | 0.00 | 0.00 | 4.02 |
5905 | 10534 | 2.262915 | CTCCCGGCTCACAGTCAC | 59.737 | 66.667 | 0.00 | 0.00 | 0.00 | 3.67 |
5906 | 10535 | 2.435120 | TACCTCCCGGCTCACAGTCA | 62.435 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5907 | 10536 | 1.681327 | TACCTCCCGGCTCACAGTC | 60.681 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
5908 | 10537 | 1.982938 | GTACCTCCCGGCTCACAGT | 60.983 | 63.158 | 0.00 | 0.00 | 0.00 | 3.55 |
5921 | 10550 | 2.341101 | CGTCTGTGAGCCCGTACCT | 61.341 | 63.158 | 0.00 | 0.00 | 0.00 | 3.08 |
5930 | 10559 | 1.216710 | GAAGGAGGCCGTCTGTGAG | 59.783 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
5939 | 10568 | 2.456443 | GGGAGATGGGAAGGAGGCC | 61.456 | 68.421 | 0.00 | 0.00 | 0.00 | 5.19 |
5940 | 10569 | 0.990818 | AAGGGAGATGGGAAGGAGGC | 60.991 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
5941 | 10570 | 1.135960 | GAAGGGAGATGGGAAGGAGG | 58.864 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5942 | 10571 | 2.046292 | GAGAAGGGAGATGGGAAGGAG | 58.954 | 57.143 | 0.00 | 0.00 | 0.00 | 3.69 |
5943 | 10572 | 1.344496 | GGAGAAGGGAGATGGGAAGGA | 60.344 | 57.143 | 0.00 | 0.00 | 0.00 | 3.36 |
5944 | 10573 | 1.135960 | GGAGAAGGGAGATGGGAAGG | 58.864 | 60.000 | 0.00 | 0.00 | 0.00 | 3.46 |
5945 | 10574 | 1.488393 | GTGGAGAAGGGAGATGGGAAG | 59.512 | 57.143 | 0.00 | 0.00 | 0.00 | 3.46 |
5946 | 10575 | 1.584724 | GTGGAGAAGGGAGATGGGAA | 58.415 | 55.000 | 0.00 | 0.00 | 0.00 | 3.97 |
5947 | 10576 | 3.324246 | GTGGAGAAGGGAGATGGGA | 57.676 | 57.895 | 0.00 | 0.00 | 0.00 | 4.37 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.