Multiple sequence alignment - TraesCS2B01G455800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G455800 chr2B 100.000 3288 0 0 1 3288 650352345 650355632 0.000000e+00 6072.0
1 TraesCS2B01G455800 chr2B 85.802 486 69 0 1137 1622 526970024 526970509 1.750000e-142 516.0
2 TraesCS2B01G455800 chr2B 82.296 514 83 5 1740 2249 526970597 526971106 3.900000e-119 438.0
3 TraesCS2B01G455800 chr2B 80.620 258 42 8 1741 1994 526763965 526764218 3.350000e-45 193.0
4 TraesCS2B01G455800 chr2B 85.246 61 5 3 2634 2693 40507720 40507663 3.540000e-05 60.2
5 TraesCS2B01G455800 chr2A 89.507 1725 85 27 782 2487 686867064 686868711 0.000000e+00 2095.0
6 TraesCS2B01G455800 chr2A 88.450 684 59 18 74 741 686866389 686867068 0.000000e+00 808.0
7 TraesCS2B01G455800 chr2A 85.597 486 70 0 1137 1622 592091406 592091891 8.140000e-141 510.0
8 TraesCS2B01G455800 chr2A 84.078 515 72 7 1740 2249 592091993 592092502 3.810000e-134 488.0
9 TraesCS2B01G455800 chr2A 81.023 469 87 2 1148 1615 591608001 591608468 4.010000e-99 372.0
10 TraesCS2B01G455800 chr2A 78.004 541 107 11 1741 2275 591608581 591609115 2.450000e-86 329.0
11 TraesCS2B01G455800 chr2A 80.066 301 50 9 1741 2036 591265115 591265410 7.150000e-52 215.0
12 TraesCS2B01G455800 chr2A 78.947 190 23 13 3070 3257 465142882 465142708 2.680000e-21 113.0
13 TraesCS2B01G455800 chr2D 92.584 1335 46 20 363 1646 544659332 544660664 0.000000e+00 1868.0
14 TraesCS2B01G455800 chr2D 94.980 737 32 5 1650 2382 544660698 544661433 0.000000e+00 1151.0
15 TraesCS2B01G455800 chr2D 85.597 486 70 0 1137 1622 447321426 447321911 8.140000e-141 510.0
16 TraesCS2B01G455800 chr2D 83.268 514 78 5 1740 2249 447321994 447322503 1.790000e-127 466.0
17 TraesCS2B01G455800 chr2D 84.718 301 32 4 74 370 544658812 544659102 4.150000e-74 289.0
18 TraesCS2B01G455800 chr2D 80.000 180 21 9 2864 3030 544661719 544661896 5.760000e-23 119.0
19 TraesCS2B01G455800 chr4B 85.149 202 22 4 3070 3264 605241545 605241345 2.000000e-47 200.0
20 TraesCS2B01G455800 chr4B 90.909 88 7 1 1 88 571947043 571946957 2.070000e-22 117.0
21 TraesCS2B01G455800 chr4B 94.595 74 4 0 1 74 306743374 306743301 7.460000e-22 115.0
22 TraesCS2B01G455800 chr7D 81.068 206 23 7 3067 3257 111373804 111374008 2.040000e-32 150.0
23 TraesCS2B01G455800 chr7D 86.441 59 3 3 2629 2684 522881706 522881762 3.540000e-05 60.2
24 TraesCS2B01G455800 chr6B 86.047 129 18 0 3129 3257 678257695 678257823 4.420000e-29 139.0
25 TraesCS2B01G455800 chr6B 93.671 79 4 1 1 78 261234238 261234316 2.070000e-22 117.0
26 TraesCS2B01G455800 chr6B 89.773 88 8 1 1 87 122029487 122029400 9.640000e-21 111.0
27 TraesCS2B01G455800 chr1B 97.297 74 2 0 1 74 92958101 92958174 3.440000e-25 126.0
28 TraesCS2B01G455800 chr1B 93.103 87 5 1 2 87 654877857 654877771 3.440000e-25 126.0
29 TraesCS2B01G455800 chr1B 95.946 74 3 0 1 74 627257368 627257295 1.600000e-23 121.0
30 TraesCS2B01G455800 chr4A 95.890 73 3 0 1 73 726466867 726466795 5.760000e-23 119.0
31 TraesCS2B01G455800 chr5D 94.595 74 4 0 1 74 305432573 305432500 7.460000e-22 115.0
32 TraesCS2B01G455800 chr5D 90.323 62 6 0 2568 2629 462454799 462454738 7.560000e-12 82.4
33 TraesCS2B01G455800 chr3D 90.323 62 6 0 2566 2627 48350431 48350492 7.560000e-12 82.4
34 TraesCS2B01G455800 chr6D 84.211 76 9 2 2592 2665 451766203 451766277 1.640000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G455800 chr2B 650352345 650355632 3287 False 6072.00 6072 100.0000 1 3288 1 chr2B.!!$F2 3287
1 TraesCS2B01G455800 chr2B 526970024 526971106 1082 False 477.00 516 84.0490 1137 2249 2 chr2B.!!$F3 1112
2 TraesCS2B01G455800 chr2A 686866389 686868711 2322 False 1451.50 2095 88.9785 74 2487 2 chr2A.!!$F4 2413
3 TraesCS2B01G455800 chr2A 592091406 592092502 1096 False 499.00 510 84.8375 1137 2249 2 chr2A.!!$F3 1112
4 TraesCS2B01G455800 chr2A 591608001 591609115 1114 False 350.50 372 79.5135 1148 2275 2 chr2A.!!$F2 1127
5 TraesCS2B01G455800 chr2D 544658812 544661896 3084 False 856.75 1868 88.0705 74 3030 4 chr2D.!!$F2 2956
6 TraesCS2B01G455800 chr2D 447321426 447322503 1077 False 488.00 510 84.4325 1137 2249 2 chr2D.!!$F1 1112

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
27 28 0.178975 TCCAACAGTCCGGCCAAAAT 60.179 50.0 2.24 0.0 0.00 1.82 F
52 53 0.179081 GTCCGGCTGTCTGAATACCC 60.179 60.0 0.00 0.0 0.00 3.69 F
1236 1551 0.469917 CCATACCGTGCTGGGAGATT 59.530 55.0 0.39 0.0 44.64 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1410 1725 0.108804 CGTTAAGCTTCTCGGCCTGA 60.109 55.000 0.00 0.0 0.0 3.86 R
1425 1740 2.953821 GGGTCGACCGACACGTTA 59.046 61.111 27.68 0.0 46.2 3.18 R
3211 3608 0.035439 AACTTACCGGCTGACCCATG 60.035 55.000 0.00 0.0 0.0 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.893637 CTTCATAGTCCAACAGTCCGG 58.106 52.381 0.00 0.00 0.00 5.14
21 22 0.535335 TCATAGTCCAACAGTCCGGC 59.465 55.000 0.00 0.00 0.00 6.13
22 23 0.462047 CATAGTCCAACAGTCCGGCC 60.462 60.000 0.00 0.00 0.00 6.13
23 24 0.907704 ATAGTCCAACAGTCCGGCCA 60.908 55.000 2.24 0.00 0.00 5.36
24 25 1.122632 TAGTCCAACAGTCCGGCCAA 61.123 55.000 2.24 0.00 0.00 4.52
25 26 1.527380 GTCCAACAGTCCGGCCAAA 60.527 57.895 2.24 0.00 0.00 3.28
26 27 1.104577 GTCCAACAGTCCGGCCAAAA 61.105 55.000 2.24 0.00 0.00 2.44
27 28 0.178975 TCCAACAGTCCGGCCAAAAT 60.179 50.000 2.24 0.00 0.00 1.82
28 29 1.074084 TCCAACAGTCCGGCCAAAATA 59.926 47.619 2.24 0.00 0.00 1.40
29 30 2.099405 CCAACAGTCCGGCCAAAATAT 58.901 47.619 2.24 0.00 0.00 1.28
30 31 3.054287 TCCAACAGTCCGGCCAAAATATA 60.054 43.478 2.24 0.00 0.00 0.86
31 32 3.888930 CCAACAGTCCGGCCAAAATATAT 59.111 43.478 2.24 0.00 0.00 0.86
32 33 5.067273 CCAACAGTCCGGCCAAAATATATA 58.933 41.667 2.24 0.00 0.00 0.86
33 34 5.181245 CCAACAGTCCGGCCAAAATATATAG 59.819 44.000 2.24 0.00 0.00 1.31
34 35 5.562298 ACAGTCCGGCCAAAATATATAGT 57.438 39.130 2.24 0.00 0.00 2.12
35 36 5.548406 ACAGTCCGGCCAAAATATATAGTC 58.452 41.667 2.24 0.00 0.00 2.59
36 37 4.935808 CAGTCCGGCCAAAATATATAGTCC 59.064 45.833 2.24 0.00 0.00 3.85
37 38 3.930848 GTCCGGCCAAAATATATAGTCCG 59.069 47.826 2.24 2.11 35.80 4.79
39 40 2.676342 CGGCCAAAATATATAGTCCGGC 59.324 50.000 2.24 12.20 37.57 6.13
40 41 3.618997 CGGCCAAAATATATAGTCCGGCT 60.619 47.826 17.40 0.00 38.37 5.52
41 42 3.689649 GGCCAAAATATATAGTCCGGCTG 59.310 47.826 17.40 0.00 38.37 4.85
42 43 4.324267 GCCAAAATATATAGTCCGGCTGT 58.676 43.478 12.98 0.00 35.39 4.40
43 44 4.392138 GCCAAAATATATAGTCCGGCTGTC 59.608 45.833 12.98 0.00 35.39 3.51
44 45 5.794894 CCAAAATATATAGTCCGGCTGTCT 58.205 41.667 0.00 0.00 0.00 3.41
45 46 5.639506 CCAAAATATATAGTCCGGCTGTCTG 59.360 44.000 0.00 0.00 0.00 3.51
46 47 6.455647 CAAAATATATAGTCCGGCTGTCTGA 58.544 40.000 0.00 0.00 0.00 3.27
47 48 6.665992 AAATATATAGTCCGGCTGTCTGAA 57.334 37.500 0.00 0.00 0.00 3.02
48 49 6.859112 AATATATAGTCCGGCTGTCTGAAT 57.141 37.500 0.00 0.00 0.00 2.57
49 50 7.956328 AATATATAGTCCGGCTGTCTGAATA 57.044 36.000 0.00 0.00 0.00 1.75
50 51 5.646577 ATATAGTCCGGCTGTCTGAATAC 57.353 43.478 0.00 0.00 0.00 1.89
51 52 0.824759 AGTCCGGCTGTCTGAATACC 59.175 55.000 0.00 0.00 0.00 2.73
52 53 0.179081 GTCCGGCTGTCTGAATACCC 60.179 60.000 0.00 0.00 0.00 3.69
53 54 1.146263 CCGGCTGTCTGAATACCCC 59.854 63.158 0.00 0.00 0.00 4.95
54 55 1.146263 CGGCTGTCTGAATACCCCC 59.854 63.158 0.00 0.00 0.00 5.40
55 56 1.338136 CGGCTGTCTGAATACCCCCT 61.338 60.000 0.00 0.00 0.00 4.79
56 57 1.802553 GGCTGTCTGAATACCCCCTA 58.197 55.000 0.00 0.00 0.00 3.53
57 58 2.124411 GGCTGTCTGAATACCCCCTAA 58.876 52.381 0.00 0.00 0.00 2.69
58 59 2.711547 GGCTGTCTGAATACCCCCTAAT 59.288 50.000 0.00 0.00 0.00 1.73
59 60 3.138468 GGCTGTCTGAATACCCCCTAATT 59.862 47.826 0.00 0.00 0.00 1.40
60 61 4.390264 GCTGTCTGAATACCCCCTAATTC 58.610 47.826 0.00 0.00 33.57 2.17
61 62 4.141482 GCTGTCTGAATACCCCCTAATTCA 60.141 45.833 0.00 0.00 39.24 2.57
78 79 3.615811 AGGACTCCCTCAGGGCCA 61.616 66.667 4.08 0.00 43.94 5.36
96 97 1.065418 CCACTCCATGTAACCCCTCAC 60.065 57.143 0.00 0.00 0.00 3.51
104 105 4.342951 CCATGTAACCCCTCACTTCGTATA 59.657 45.833 0.00 0.00 0.00 1.47
150 151 6.554658 AAGCCCTAGATCTAGGTCTTCCCC 62.555 54.167 36.09 19.76 45.35 4.81
181 182 2.676822 TTCGACCTCTCCGCTGCT 60.677 61.111 0.00 0.00 0.00 4.24
184 185 1.820056 CGACCTCTCCGCTGCTAGA 60.820 63.158 0.00 0.00 0.00 2.43
198 199 6.921857 TCCGCTGCTAGATTTATAAACACTAC 59.078 38.462 0.00 4.35 0.00 2.73
222 223 6.154445 CAGGATTATGAATACCAAAGCATGC 58.846 40.000 10.51 10.51 0.00 4.06
223 224 5.244626 AGGATTATGAATACCAAAGCATGCC 59.755 40.000 15.66 0.00 0.00 4.40
235 236 4.121317 CAAAGCATGCCTTTCAAACAGAA 58.879 39.130 15.66 0.00 41.75 3.02
246 247 6.348050 GCCTTTCAAACAGAACTCAGTGATAG 60.348 42.308 0.00 0.00 35.56 2.08
248 249 7.227512 CCTTTCAAACAGAACTCAGTGATAGTT 59.772 37.037 0.00 0.00 39.84 2.24
261 262 9.344772 ACTCAGTGATAGTTAGATGTACCTTAG 57.655 37.037 0.00 0.00 0.00 2.18
264 265 8.569641 CAGTGATAGTTAGATGTACCTTAGACC 58.430 40.741 0.00 0.00 0.00 3.85
274 275 1.372501 ACCTTAGACCACAAGGCCAT 58.627 50.000 5.01 0.00 45.50 4.40
275 276 1.282157 ACCTTAGACCACAAGGCCATC 59.718 52.381 5.01 0.00 45.50 3.51
282 288 0.899720 CCACAAGGCCATCAGCAAAT 59.100 50.000 5.01 0.00 46.50 2.32
289 295 2.633967 AGGCCATCAGCAAATCAAACAA 59.366 40.909 5.01 0.00 46.50 2.83
295 301 5.433855 CATCAGCAAATCAAACAAAAACCG 58.566 37.500 0.00 0.00 0.00 4.44
317 323 8.385898 ACCGAATTAATACAGAAGAACACAAA 57.614 30.769 0.00 0.00 0.00 2.83
456 700 4.589216 TGATCTTGGACAAGGCAAAAAG 57.411 40.909 11.76 0.00 38.88 2.27
457 701 2.888834 TCTTGGACAAGGCAAAAAGC 57.111 45.000 11.76 0.00 44.65 3.51
551 797 2.127421 GCATTGTGCGACGCGAAA 60.127 55.556 15.93 12.24 31.71 3.46
667 920 4.838486 CCGAGGCACGAGACGCTC 62.838 72.222 5.74 0.00 45.77 5.03
983 1264 2.112198 AGCAGAGCTCGAGAGACCG 61.112 63.158 18.75 0.49 30.62 4.79
1236 1551 0.469917 CCATACCGTGCTGGGAGATT 59.530 55.000 0.39 0.00 44.64 2.40
1425 1740 2.267324 GCTCAGGCCGAGAAGCTT 59.733 61.111 23.26 0.00 45.45 3.74
1652 2001 0.108329 AAGGGTTCGTCGTGCCATAG 60.108 55.000 9.32 0.00 0.00 2.23
1657 2006 0.892755 TTCGTCGTGCCATAGTTCCT 59.107 50.000 0.00 0.00 0.00 3.36
1698 2074 5.863397 GCATGAATTCAACTCATTCCGAAAA 59.137 36.000 13.09 0.00 30.99 2.29
1703 2079 6.573664 ATTCAACTCATTCCGAAAATCACA 57.426 33.333 0.00 0.00 0.00 3.58
1704 2080 5.611796 TCAACTCATTCCGAAAATCACAG 57.388 39.130 0.00 0.00 0.00 3.66
1800 2178 2.833151 TACATCTTCCCCGGCACCCT 62.833 60.000 0.00 0.00 0.00 4.34
2206 2587 1.573108 ACCACCTCATGAAGTCCGAT 58.427 50.000 0.00 0.00 0.00 4.18
2212 2593 0.107703 TCATGAAGTCCGATGCCACC 60.108 55.000 0.00 0.00 0.00 4.61
2290 2671 1.834458 GCCGGTTTCGTTTGTAGCGT 61.834 55.000 1.90 0.00 33.95 5.07
2323 2705 7.340256 TCTTTTTACAGTAGTTTGGGAGTTCA 58.660 34.615 0.00 0.00 0.00 3.18
2325 2707 7.739498 TTTTACAGTAGTTTGGGAGTTCATC 57.261 36.000 0.00 0.00 0.00 2.92
2405 2791 1.441515 GCTCGTTAGTCGCGTGTCA 60.442 57.895 5.77 0.00 39.67 3.58
2409 2795 1.582968 GTTAGTCGCGTGTCAGGGA 59.417 57.895 5.77 0.00 0.00 4.20
2446 2832 7.952671 TGACACAATATATAACAGTCTCCCTC 58.047 38.462 0.00 0.00 0.00 4.30
2472 2858 2.004017 AGACTTCAACGACGCAAAACA 58.996 42.857 0.00 0.00 0.00 2.83
2475 2861 1.063469 CTTCAACGACGCAAAACACCT 59.937 47.619 0.00 0.00 0.00 4.00
2477 2863 0.316689 CAACGACGCAAAACACCTCC 60.317 55.000 0.00 0.00 0.00 4.30
2488 2874 3.849951 CACCTCCGCGTGGGCTAT 61.850 66.667 16.49 0.00 36.88 2.97
2489 2875 3.081409 ACCTCCGCGTGGGCTATT 61.081 61.111 16.49 0.00 36.88 1.73
2490 2876 2.588877 CCTCCGCGTGGGCTATTG 60.589 66.667 16.49 0.00 36.88 1.90
2491 2877 2.588877 CTCCGCGTGGGCTATTGG 60.589 66.667 16.49 0.00 36.88 3.16
2492 2878 3.385749 CTCCGCGTGGGCTATTGGT 62.386 63.158 16.49 0.00 36.88 3.67
2493 2879 2.023414 CTCCGCGTGGGCTATTGGTA 62.023 60.000 16.49 0.00 36.88 3.25
2494 2880 1.153329 CCGCGTGGGCTATTGGTAA 60.153 57.895 7.26 0.00 36.88 2.85
2495 2881 1.157870 CCGCGTGGGCTATTGGTAAG 61.158 60.000 7.26 0.00 36.88 2.34
2496 2882 1.157870 CGCGTGGGCTATTGGTAAGG 61.158 60.000 0.00 0.00 36.88 2.69
2497 2883 0.818040 GCGTGGGCTATTGGTAAGGG 60.818 60.000 0.00 0.00 35.83 3.95
2498 2884 0.544697 CGTGGGCTATTGGTAAGGGT 59.455 55.000 0.00 0.00 0.00 4.34
2499 2885 1.064979 CGTGGGCTATTGGTAAGGGTT 60.065 52.381 0.00 0.00 0.00 4.11
2500 2886 2.619590 CGTGGGCTATTGGTAAGGGTTT 60.620 50.000 0.00 0.00 0.00 3.27
2501 2887 3.437213 GTGGGCTATTGGTAAGGGTTTT 58.563 45.455 0.00 0.00 0.00 2.43
2502 2888 3.835978 GTGGGCTATTGGTAAGGGTTTTT 59.164 43.478 0.00 0.00 0.00 1.94
2518 2904 1.517832 TTTTTGTTGCGGGGTGTGG 59.482 52.632 0.00 0.00 0.00 4.17
2519 2905 1.961180 TTTTTGTTGCGGGGTGTGGG 61.961 55.000 0.00 0.00 0.00 4.61
2522 2908 4.338710 GTTGCGGGGTGTGGGCTA 62.339 66.667 0.00 0.00 0.00 3.93
2523 2909 3.334891 TTGCGGGGTGTGGGCTAT 61.335 61.111 0.00 0.00 0.00 2.97
2524 2910 1.996187 TTGCGGGGTGTGGGCTATA 60.996 57.895 0.00 0.00 0.00 1.31
2525 2911 1.349542 TTGCGGGGTGTGGGCTATAT 61.350 55.000 0.00 0.00 0.00 0.86
2549 2935 8.728088 ATGTAAGTTGCTCGAAAATTTTACAG 57.272 30.769 2.75 4.00 34.47 2.74
2550 2936 7.921787 TGTAAGTTGCTCGAAAATTTTACAGA 58.078 30.769 2.75 3.56 0.00 3.41
2551 2937 8.564574 TGTAAGTTGCTCGAAAATTTTACAGAT 58.435 29.630 2.75 0.00 0.00 2.90
2555 2941 8.730680 AGTTGCTCGAAAATTTTACAGATGTAT 58.269 29.630 2.75 0.00 0.00 2.29
2568 2954 8.771920 TTTACAGATGTATGTCGATTTTGAGT 57.228 30.769 0.00 0.00 34.56 3.41
2569 2955 6.653273 ACAGATGTATGTCGATTTTGAGTG 57.347 37.500 0.00 0.00 0.00 3.51
2570 2956 6.166279 ACAGATGTATGTCGATTTTGAGTGT 58.834 36.000 0.00 0.00 0.00 3.55
2571 2957 6.091305 ACAGATGTATGTCGATTTTGAGTGTG 59.909 38.462 0.00 0.00 0.00 3.82
2573 2959 3.435327 TGTATGTCGATTTTGAGTGTGGC 59.565 43.478 0.00 0.00 0.00 5.01
2574 2960 2.254546 TGTCGATTTTGAGTGTGGCT 57.745 45.000 0.00 0.00 0.00 4.75
2575 2961 3.394674 TGTCGATTTTGAGTGTGGCTA 57.605 42.857 0.00 0.00 0.00 3.93
2576 2962 3.325870 TGTCGATTTTGAGTGTGGCTAG 58.674 45.455 0.00 0.00 0.00 3.42
2577 2963 2.673368 GTCGATTTTGAGTGTGGCTAGG 59.327 50.000 0.00 0.00 0.00 3.02
2578 2964 2.301870 TCGATTTTGAGTGTGGCTAGGT 59.698 45.455 0.00 0.00 0.00 3.08
2579 2965 2.416547 CGATTTTGAGTGTGGCTAGGTG 59.583 50.000 0.00 0.00 0.00 4.00
2580 2966 1.604604 TTTTGAGTGTGGCTAGGTGC 58.395 50.000 0.00 0.00 41.94 5.01
2591 2977 0.321671 GCTAGGTGCCACTCAACTGA 59.678 55.000 0.00 0.00 43.93 3.41
2593 2979 1.895798 CTAGGTGCCACTCAACTGAGA 59.104 52.381 13.61 0.00 43.93 3.27
2594 2980 1.356124 AGGTGCCACTCAACTGAGAT 58.644 50.000 13.61 0.00 42.22 2.75
2596 2982 2.107204 AGGTGCCACTCAACTGAGATTT 59.893 45.455 13.61 0.00 42.22 2.17
2597 2983 3.327757 AGGTGCCACTCAACTGAGATTTA 59.672 43.478 13.61 0.00 42.22 1.40
2599 2985 4.702131 GGTGCCACTCAACTGAGATTTAAT 59.298 41.667 13.61 0.00 44.74 1.40
2600 2986 5.880332 GGTGCCACTCAACTGAGATTTAATA 59.120 40.000 13.61 0.00 44.74 0.98
2601 2987 6.374333 GGTGCCACTCAACTGAGATTTAATAA 59.626 38.462 13.61 0.00 44.74 1.40
2602 2988 7.094377 GGTGCCACTCAACTGAGATTTAATAAA 60.094 37.037 13.61 0.00 44.74 1.40
2603 2989 7.965107 GTGCCACTCAACTGAGATTTAATAAAG 59.035 37.037 13.61 0.00 44.74 1.85
2604 2990 7.665559 TGCCACTCAACTGAGATTTAATAAAGT 59.334 33.333 13.61 0.00 44.74 2.66
2605 2991 8.178313 GCCACTCAACTGAGATTTAATAAAGTC 58.822 37.037 13.61 0.00 44.74 3.01
2606 2992 9.442047 CCACTCAACTGAGATTTAATAAAGTCT 57.558 33.333 13.61 0.00 44.74 3.24
2629 3015 3.395858 GTCAAGTGACATAGCATGCAC 57.604 47.619 21.98 8.04 44.18 4.57
2630 3016 3.005554 GTCAAGTGACATAGCATGCACT 58.994 45.455 21.98 10.49 43.97 4.40
2631 3017 3.004862 TCAAGTGACATAGCATGCACTG 58.995 45.455 21.98 18.23 42.51 3.66
2632 3018 3.004862 CAAGTGACATAGCATGCACTGA 58.995 45.455 21.98 1.93 42.51 3.41
2633 3019 3.339253 AGTGACATAGCATGCACTGAA 57.661 42.857 21.98 7.83 42.10 3.02
2634 3020 3.678289 AGTGACATAGCATGCACTGAAA 58.322 40.909 21.98 7.49 42.10 2.69
2635 3021 4.074259 AGTGACATAGCATGCACTGAAAA 58.926 39.130 21.98 5.19 42.10 2.29
2636 3022 4.155462 AGTGACATAGCATGCACTGAAAAG 59.845 41.667 21.98 3.06 42.10 2.27
2637 3023 4.154737 GTGACATAGCATGCACTGAAAAGA 59.845 41.667 21.98 0.00 35.71 2.52
2638 3024 4.761227 TGACATAGCATGCACTGAAAAGAA 59.239 37.500 21.98 0.00 0.00 2.52
2639 3025 5.241285 TGACATAGCATGCACTGAAAAGAAA 59.759 36.000 21.98 0.00 0.00 2.52
2640 3026 6.088016 ACATAGCATGCACTGAAAAGAAAA 57.912 33.333 21.98 0.00 0.00 2.29
2641 3027 6.694447 ACATAGCATGCACTGAAAAGAAAAT 58.306 32.000 21.98 0.00 0.00 1.82
2642 3028 7.156673 ACATAGCATGCACTGAAAAGAAAATT 58.843 30.769 21.98 0.00 0.00 1.82
2643 3029 7.658575 ACATAGCATGCACTGAAAAGAAAATTT 59.341 29.630 21.98 0.00 0.00 1.82
2644 3030 6.930667 AGCATGCACTGAAAAGAAAATTTT 57.069 29.167 21.98 2.28 0.00 1.82
2645 3031 9.709495 ATAGCATGCACTGAAAAGAAAATTTTA 57.291 25.926 21.98 0.00 0.00 1.52
2646 3032 7.854534 AGCATGCACTGAAAAGAAAATTTTAC 58.145 30.769 21.98 0.00 0.00 2.01
2647 3033 7.495279 AGCATGCACTGAAAAGAAAATTTTACA 59.505 29.630 21.98 0.00 0.00 2.41
2648 3034 8.284693 GCATGCACTGAAAAGAAAATTTTACAT 58.715 29.630 14.21 0.00 0.00 2.29
2649 3035 9.588774 CATGCACTGAAAAGAAAATTTTACATG 57.411 29.630 2.75 0.00 0.00 3.21
2650 3036 8.140677 TGCACTGAAAAGAAAATTTTACATGG 57.859 30.769 2.75 0.00 0.00 3.66
2651 3037 7.984050 TGCACTGAAAAGAAAATTTTACATGGA 59.016 29.630 2.75 0.00 0.00 3.41
2652 3038 8.992073 GCACTGAAAAGAAAATTTTACATGGAT 58.008 29.630 2.75 0.00 0.00 3.41
2669 3055 9.904198 TTACATGGATCTCAATGTAAGATTTCA 57.096 29.630 13.70 0.00 35.38 2.69
2670 3056 8.218338 ACATGGATCTCAATGTAAGATTTCAC 57.782 34.615 0.00 0.00 33.64 3.18
2671 3057 6.908870 TGGATCTCAATGTAAGATTTCACG 57.091 37.500 0.00 0.00 33.64 4.35
2672 3058 6.639563 TGGATCTCAATGTAAGATTTCACGA 58.360 36.000 0.00 0.00 33.64 4.35
2673 3059 7.102993 TGGATCTCAATGTAAGATTTCACGAA 58.897 34.615 0.00 0.00 33.64 3.85
2674 3060 7.770433 TGGATCTCAATGTAAGATTTCACGAAT 59.230 33.333 0.00 0.00 33.64 3.34
2675 3061 9.261180 GGATCTCAATGTAAGATTTCACGAATA 57.739 33.333 0.00 0.00 33.64 1.75
2680 3066 9.541143 TCAATGTAAGATTTCACGAATATAGCA 57.459 29.630 0.00 0.00 0.00 3.49
2683 3069 9.710900 ATGTAAGATTTCACGAATATAGCATCA 57.289 29.630 0.00 0.00 0.00 3.07
2684 3070 8.978539 TGTAAGATTTCACGAATATAGCATCAC 58.021 33.333 0.00 0.00 0.00 3.06
2685 3071 9.197694 GTAAGATTTCACGAATATAGCATCACT 57.802 33.333 0.00 0.00 0.00 3.41
2686 3072 7.649370 AGATTTCACGAATATAGCATCACTG 57.351 36.000 0.00 0.00 0.00 3.66
2687 3073 7.436933 AGATTTCACGAATATAGCATCACTGA 58.563 34.615 0.00 0.00 0.00 3.41
2688 3074 7.928167 AGATTTCACGAATATAGCATCACTGAA 59.072 33.333 0.00 0.00 0.00 3.02
2689 3075 7.841915 TTTCACGAATATAGCATCACTGAAA 57.158 32.000 0.00 0.00 0.00 2.69
2690 3076 6.828502 TCACGAATATAGCATCACTGAAAC 57.171 37.500 0.00 0.00 0.00 2.78
2691 3077 6.573434 TCACGAATATAGCATCACTGAAACT 58.427 36.000 0.00 0.00 0.00 2.66
2692 3078 7.041721 TCACGAATATAGCATCACTGAAACTT 58.958 34.615 0.00 0.00 0.00 2.66
2693 3079 7.010460 TCACGAATATAGCATCACTGAAACTTG 59.990 37.037 0.00 0.00 0.00 3.16
2694 3080 7.010460 CACGAATATAGCATCACTGAAACTTGA 59.990 37.037 0.00 0.00 0.00 3.02
2695 3081 7.223582 ACGAATATAGCATCACTGAAACTTGAG 59.776 37.037 0.00 0.00 0.00 3.02
2696 3082 7.436376 CGAATATAGCATCACTGAAACTTGAGA 59.564 37.037 0.00 0.00 0.00 3.27
2697 3083 9.270640 GAATATAGCATCACTGAAACTTGAGAT 57.729 33.333 0.00 0.00 0.00 2.75
2698 3084 9.624373 AATATAGCATCACTGAAACTTGAGATT 57.376 29.630 0.00 0.00 0.00 2.40
2699 3085 7.934855 ATAGCATCACTGAAACTTGAGATTT 57.065 32.000 0.00 0.00 0.00 2.17
2701 3087 7.375106 AGCATCACTGAAACTTGAGATTTAG 57.625 36.000 0.00 0.00 0.00 1.85
2702 3088 6.939163 AGCATCACTGAAACTTGAGATTTAGT 59.061 34.615 0.00 0.00 29.21 2.24
2703 3089 8.097038 AGCATCACTGAAACTTGAGATTTAGTA 58.903 33.333 0.00 0.00 28.46 1.82
2704 3090 8.721478 GCATCACTGAAACTTGAGATTTAGTAA 58.279 33.333 0.00 0.00 28.46 2.24
2725 3111 3.751518 AGATTGTTGTAGGAAACGGCTT 58.248 40.909 0.00 0.00 32.47 4.35
2732 3118 3.857052 TGTAGGAAACGGCTTGATGTAG 58.143 45.455 0.00 0.00 0.00 2.74
2745 3131 5.512060 GGCTTGATGTAGAAGATGCATAGGA 60.512 44.000 0.00 0.00 33.94 2.94
2752 3138 2.106166 AGAAGATGCATAGGAGCCCTTG 59.894 50.000 0.00 0.54 34.61 3.61
2756 3142 2.116869 TGCATAGGAGCCCTTGGATA 57.883 50.000 0.00 0.00 34.61 2.59
2767 3153 3.000727 GCCCTTGGATATAAATCGGACG 58.999 50.000 0.00 0.00 32.44 4.79
2771 3157 4.081862 CCTTGGATATAAATCGGACGGCTA 60.082 45.833 0.00 0.00 32.44 3.93
2775 3161 6.469410 TGGATATAAATCGGACGGCTAAAAT 58.531 36.000 0.00 0.00 32.44 1.82
2776 3162 7.613585 TGGATATAAATCGGACGGCTAAAATA 58.386 34.615 0.00 0.00 32.44 1.40
2778 3164 8.938906 GGATATAAATCGGACGGCTAAAATAAA 58.061 33.333 0.00 0.00 32.44 1.40
2780 3166 4.525411 AATCGGACGGCTAAAATAAACG 57.475 40.909 0.00 0.00 0.00 3.60
2783 3169 2.667481 CGGACGGCTAAAATAAACGACA 59.333 45.455 0.00 0.00 0.00 4.35
2785 3171 4.397382 GGACGGCTAAAATAAACGACAAC 58.603 43.478 0.00 0.00 0.00 3.32
2786 3172 4.083908 GGACGGCTAAAATAAACGACAACA 60.084 41.667 0.00 0.00 0.00 3.33
2787 3173 5.391203 GGACGGCTAAAATAAACGACAACAT 60.391 40.000 0.00 0.00 0.00 2.71
2788 3174 6.183360 GGACGGCTAAAATAAACGACAACATA 60.183 38.462 0.00 0.00 0.00 2.29
2829 3215 4.409218 CATGCATATGCCCCGCGC 62.409 66.667 24.54 0.00 41.18 6.86
2830 3216 4.648626 ATGCATATGCCCCGCGCT 62.649 61.111 24.54 0.00 41.18 5.92
2833 3219 4.624364 CATATGCCCCGCGCTCCA 62.624 66.667 5.56 0.00 38.78 3.86
2834 3220 3.640407 ATATGCCCCGCGCTCCAT 61.640 61.111 5.56 4.66 38.78 3.41
2835 3221 2.290287 ATATGCCCCGCGCTCCATA 61.290 57.895 5.56 6.93 38.78 2.74
2836 3222 1.626356 ATATGCCCCGCGCTCCATAT 61.626 55.000 5.56 9.03 38.78 1.78
2837 3223 0.973496 TATGCCCCGCGCTCCATATA 60.973 55.000 5.56 0.00 38.78 0.86
2838 3224 1.626356 ATGCCCCGCGCTCCATATAT 61.626 55.000 5.56 0.00 38.78 0.86
2839 3225 1.078426 GCCCCGCGCTCCATATATT 60.078 57.895 5.56 0.00 0.00 1.28
2840 3226 0.177141 GCCCCGCGCTCCATATATTA 59.823 55.000 5.56 0.00 0.00 0.98
2841 3227 1.406341 GCCCCGCGCTCCATATATTAA 60.406 52.381 5.56 0.00 0.00 1.40
2842 3228 2.937873 GCCCCGCGCTCCATATATTAAA 60.938 50.000 5.56 0.00 0.00 1.52
2843 3229 2.676342 CCCCGCGCTCCATATATTAAAC 59.324 50.000 5.56 0.00 0.00 2.01
2844 3230 3.331150 CCCGCGCTCCATATATTAAACA 58.669 45.455 5.56 0.00 0.00 2.83
2845 3231 3.124636 CCCGCGCTCCATATATTAAACAC 59.875 47.826 5.56 0.00 0.00 3.32
2846 3232 3.743911 CCGCGCTCCATATATTAAACACA 59.256 43.478 5.56 0.00 0.00 3.72
2847 3233 4.212425 CCGCGCTCCATATATTAAACACAA 59.788 41.667 5.56 0.00 0.00 3.33
2848 3234 5.277586 CCGCGCTCCATATATTAAACACAAA 60.278 40.000 5.56 0.00 0.00 2.83
2849 3235 5.619607 CGCGCTCCATATATTAAACACAAAC 59.380 40.000 5.56 0.00 0.00 2.93
2850 3236 6.491394 GCGCTCCATATATTAAACACAAACA 58.509 36.000 0.00 0.00 0.00 2.83
2851 3237 6.413818 GCGCTCCATATATTAAACACAAACAC 59.586 38.462 0.00 0.00 0.00 3.32
2852 3238 7.468441 CGCTCCATATATTAAACACAAACACA 58.532 34.615 0.00 0.00 0.00 3.72
2853 3239 8.128582 CGCTCCATATATTAAACACAAACACAT 58.871 33.333 0.00 0.00 0.00 3.21
2854 3240 9.801873 GCTCCATATATTAAACACAAACACATT 57.198 29.630 0.00 0.00 0.00 2.71
2879 3265 0.039256 ACACATCAAACATGCGCACC 60.039 50.000 14.90 0.00 0.00 5.01
2880 3266 0.039346 CACATCAAACATGCGCACCA 60.039 50.000 14.90 0.00 0.00 4.17
2881 3267 0.241749 ACATCAAACATGCGCACCAG 59.758 50.000 14.90 8.75 0.00 4.00
2925 3313 3.093814 TGCATCAACAGATGAAAGCCAT 58.906 40.909 9.49 0.00 42.54 4.40
2937 3325 2.560981 TGAAAGCCATCGACAGTCACTA 59.439 45.455 0.41 0.00 0.00 2.74
2942 3330 2.609491 GCCATCGACAGTCACTACACAA 60.609 50.000 0.41 0.00 0.00 3.33
2962 3359 0.308993 GTGCTTGCTTGGTCTCACAC 59.691 55.000 0.00 0.00 0.00 3.82
2968 3365 2.358957 TGCTTGGTCTCACACATATGC 58.641 47.619 1.58 0.00 0.00 3.14
2970 3367 2.621338 CTTGGTCTCACACATATGCGT 58.379 47.619 1.58 0.00 0.00 5.24
2972 3369 4.371786 CTTGGTCTCACACATATGCGTAT 58.628 43.478 1.58 0.00 0.00 3.06
2975 3372 3.736252 GGTCTCACACATATGCGTATGTC 59.264 47.826 25.42 14.55 46.06 3.06
2976 3373 3.422217 GTCTCACACATATGCGTATGTCG 59.578 47.826 25.42 21.53 46.06 4.35
2993 3390 0.237235 TCGCAGCATCGGTTTGAAAC 59.763 50.000 0.00 0.00 0.00 2.78
3037 3434 9.676861 TCCATAGAAATAATATCTGCATTCCAG 57.323 33.333 0.00 0.00 43.17 3.86
3038 3435 8.900781 CCATAGAAATAATATCTGCATTCCAGG 58.099 37.037 0.00 0.00 42.05 4.45
3039 3436 6.830873 AGAAATAATATCTGCATTCCAGGC 57.169 37.500 0.00 0.00 42.05 4.85
3040 3437 5.413833 AGAAATAATATCTGCATTCCAGGCG 59.586 40.000 0.00 0.00 42.05 5.52
3041 3438 1.901591 AATATCTGCATTCCAGGCGG 58.098 50.000 0.00 0.00 42.05 6.13
3042 3439 0.037303 ATATCTGCATTCCAGGCGGG 59.963 55.000 0.00 0.00 42.05 6.13
3043 3440 2.680974 TATCTGCATTCCAGGCGGGC 62.681 60.000 0.00 0.00 42.05 6.13
3059 3456 2.049248 GCGGTGTTTGCCCACATG 60.049 61.111 0.00 0.00 37.06 3.21
3060 3457 2.855514 GCGGTGTTTGCCCACATGT 61.856 57.895 0.00 0.00 37.06 3.21
3061 3458 1.285641 CGGTGTTTGCCCACATGTC 59.714 57.895 0.00 0.00 37.06 3.06
3062 3459 1.172180 CGGTGTTTGCCCACATGTCT 61.172 55.000 0.00 0.00 37.06 3.41
3063 3460 1.039856 GGTGTTTGCCCACATGTCTT 58.960 50.000 0.00 0.00 37.06 3.01
3064 3461 1.000274 GGTGTTTGCCCACATGTCTTC 60.000 52.381 0.00 0.00 37.06 2.87
3065 3462 1.000274 GTGTTTGCCCACATGTCTTCC 60.000 52.381 0.00 0.00 35.38 3.46
3066 3463 1.327303 GTTTGCCCACATGTCTTCCA 58.673 50.000 0.00 0.00 0.00 3.53
3067 3464 1.686052 GTTTGCCCACATGTCTTCCAA 59.314 47.619 0.00 0.00 0.00 3.53
3068 3465 1.619654 TTGCCCACATGTCTTCCAAG 58.380 50.000 0.00 0.00 0.00 3.61
3069 3466 0.895100 TGCCCACATGTCTTCCAAGC 60.895 55.000 0.00 0.00 0.00 4.01
3070 3467 0.895100 GCCCACATGTCTTCCAAGCA 60.895 55.000 0.00 0.00 0.00 3.91
3071 3468 0.883833 CCCACATGTCTTCCAAGCAC 59.116 55.000 0.00 0.00 0.00 4.40
3072 3469 1.546323 CCCACATGTCTTCCAAGCACT 60.546 52.381 0.00 0.00 0.00 4.40
3073 3470 1.538512 CCACATGTCTTCCAAGCACTG 59.461 52.381 0.00 0.00 0.00 3.66
3074 3471 2.224606 CACATGTCTTCCAAGCACTGT 58.775 47.619 0.00 0.00 0.00 3.55
3075 3472 2.620115 CACATGTCTTCCAAGCACTGTT 59.380 45.455 0.00 0.00 0.00 3.16
3076 3473 2.880890 ACATGTCTTCCAAGCACTGTTC 59.119 45.455 0.00 0.00 0.00 3.18
3077 3474 2.708216 TGTCTTCCAAGCACTGTTCA 57.292 45.000 0.00 0.00 0.00 3.18
3078 3475 2.997980 TGTCTTCCAAGCACTGTTCAA 58.002 42.857 0.00 0.00 0.00 2.69
3079 3476 2.945008 TGTCTTCCAAGCACTGTTCAAG 59.055 45.455 0.00 0.00 0.00 3.02
3080 3477 3.206150 GTCTTCCAAGCACTGTTCAAGA 58.794 45.455 0.00 0.00 0.00 3.02
3081 3478 3.817647 GTCTTCCAAGCACTGTTCAAGAT 59.182 43.478 0.00 0.00 0.00 2.40
3082 3479 4.997395 GTCTTCCAAGCACTGTTCAAGATA 59.003 41.667 0.00 0.00 0.00 1.98
3083 3480 5.645497 GTCTTCCAAGCACTGTTCAAGATAT 59.355 40.000 0.00 0.00 0.00 1.63
3084 3481 5.877012 TCTTCCAAGCACTGTTCAAGATATC 59.123 40.000 0.00 0.00 0.00 1.63
3085 3482 5.426689 TCCAAGCACTGTTCAAGATATCT 57.573 39.130 0.00 0.00 0.00 1.98
3086 3483 5.809001 TCCAAGCACTGTTCAAGATATCTT 58.191 37.500 12.37 12.37 36.45 2.40
3087 3484 5.877012 TCCAAGCACTGTTCAAGATATCTTC 59.123 40.000 15.24 5.43 33.11 2.87
3088 3485 5.879223 CCAAGCACTGTTCAAGATATCTTCT 59.121 40.000 15.24 4.31 33.11 2.85
3089 3486 7.044181 CCAAGCACTGTTCAAGATATCTTCTA 58.956 38.462 15.24 4.09 33.05 2.10
3090 3487 7.550551 CCAAGCACTGTTCAAGATATCTTCTAA 59.449 37.037 15.24 9.86 33.05 2.10
3091 3488 9.107177 CAAGCACTGTTCAAGATATCTTCTAAT 57.893 33.333 15.24 0.00 33.05 1.73
3092 3489 9.678260 AAGCACTGTTCAAGATATCTTCTAATT 57.322 29.630 15.24 1.47 33.05 1.40
3093 3490 9.678260 AGCACTGTTCAAGATATCTTCTAATTT 57.322 29.630 15.24 0.00 33.05 1.82
3098 3495 9.884636 TGTTCAAGATATCTTCTAATTTTCCGA 57.115 29.630 15.24 3.18 33.05 4.55
3122 3519 4.795970 AATCGGTTGATTTATCGCTGTC 57.204 40.909 0.00 0.00 42.14 3.51
3123 3520 3.520290 TCGGTTGATTTATCGCTGTCT 57.480 42.857 0.00 0.00 0.00 3.41
3124 3521 3.186909 TCGGTTGATTTATCGCTGTCTG 58.813 45.455 0.00 0.00 0.00 3.51
3125 3522 3.119280 TCGGTTGATTTATCGCTGTCTGA 60.119 43.478 0.00 0.00 0.00 3.27
3126 3523 3.000322 CGGTTGATTTATCGCTGTCTGAC 60.000 47.826 0.00 0.00 0.00 3.51
3127 3524 4.184629 GGTTGATTTATCGCTGTCTGACT 58.815 43.478 9.51 0.00 0.00 3.41
3128 3525 4.033358 GGTTGATTTATCGCTGTCTGACTG 59.967 45.833 9.51 9.77 0.00 3.51
3129 3526 4.718940 TGATTTATCGCTGTCTGACTGA 57.281 40.909 17.48 9.17 0.00 3.41
3130 3527 5.268118 TGATTTATCGCTGTCTGACTGAT 57.732 39.130 17.48 14.76 0.00 2.90
3131 3528 6.391227 TGATTTATCGCTGTCTGACTGATA 57.609 37.500 17.48 13.92 0.00 2.15
3132 3529 6.805713 TGATTTATCGCTGTCTGACTGATAA 58.194 36.000 17.48 17.87 31.60 1.75
3133 3530 6.920210 TGATTTATCGCTGTCTGACTGATAAG 59.080 38.462 17.48 3.56 34.20 1.73
3134 3531 6.451064 TTTATCGCTGTCTGACTGATAAGA 57.549 37.500 17.48 10.62 34.20 2.10
3135 3532 6.641169 TTATCGCTGTCTGACTGATAAGAT 57.359 37.500 17.48 15.51 30.41 2.40
3136 3533 7.745620 TTATCGCTGTCTGACTGATAAGATA 57.254 36.000 17.48 14.74 30.41 1.98
3137 3534 6.641169 ATCGCTGTCTGACTGATAAGATAA 57.359 37.500 17.48 0.00 0.00 1.75
3138 3535 6.451064 TCGCTGTCTGACTGATAAGATAAA 57.549 37.500 17.48 0.00 0.00 1.40
3139 3536 7.043961 TCGCTGTCTGACTGATAAGATAAAT 57.956 36.000 17.48 0.00 0.00 1.40
3140 3537 7.142021 TCGCTGTCTGACTGATAAGATAAATC 58.858 38.462 17.48 0.00 0.00 2.17
3141 3538 6.087423 CGCTGTCTGACTGATAAGATAAATCG 59.913 42.308 17.48 4.25 0.00 3.34
3142 3539 7.142021 GCTGTCTGACTGATAAGATAAATCGA 58.858 38.462 17.48 0.00 0.00 3.59
3143 3540 7.114247 GCTGTCTGACTGATAAGATAAATCGAC 59.886 40.741 17.48 0.00 0.00 4.20
3144 3541 7.426410 TGTCTGACTGATAAGATAAATCGACC 58.574 38.462 9.51 0.00 0.00 4.79
3145 3542 7.068226 TGTCTGACTGATAAGATAAATCGACCA 59.932 37.037 9.51 0.00 0.00 4.02
3146 3543 7.921214 GTCTGACTGATAAGATAAATCGACCAA 59.079 37.037 0.00 0.00 0.00 3.67
3147 3544 8.642432 TCTGACTGATAAGATAAATCGACCAAT 58.358 33.333 0.00 0.00 0.00 3.16
3148 3545 9.914131 CTGACTGATAAGATAAATCGACCAATA 57.086 33.333 0.00 0.00 0.00 1.90
3156 3553 7.440523 AGATAAATCGACCAATAAATCAGCC 57.559 36.000 0.00 0.00 0.00 4.85
3157 3554 4.552166 AAATCGACCAATAAATCAGCCG 57.448 40.909 0.00 0.00 0.00 5.52
3158 3555 2.971660 TCGACCAATAAATCAGCCGA 57.028 45.000 0.00 0.00 0.00 5.54
3159 3556 3.469008 TCGACCAATAAATCAGCCGAT 57.531 42.857 0.00 0.00 0.00 4.18
3160 3557 4.594123 TCGACCAATAAATCAGCCGATA 57.406 40.909 0.00 0.00 0.00 2.92
3161 3558 5.147330 TCGACCAATAAATCAGCCGATAT 57.853 39.130 0.00 0.00 0.00 1.63
3162 3559 4.929211 TCGACCAATAAATCAGCCGATATG 59.071 41.667 0.00 0.00 0.00 1.78
3163 3560 4.093408 CGACCAATAAATCAGCCGATATGG 59.907 45.833 0.00 0.00 42.50 2.74
3184 3581 5.567138 GGCAATAAATTAGCCGATATGCT 57.433 39.130 0.00 0.00 45.38 3.79
3185 3582 5.335127 GGCAATAAATTAGCCGATATGCTG 58.665 41.667 0.00 0.00 42.77 4.41
3186 3583 5.123820 GGCAATAAATTAGCCGATATGCTGA 59.876 40.000 0.00 0.00 42.77 4.26
3187 3584 6.183360 GGCAATAAATTAGCCGATATGCTGAT 60.183 38.462 0.00 0.00 42.77 2.90
3188 3585 7.012327 GGCAATAAATTAGCCGATATGCTGATA 59.988 37.037 0.00 0.00 42.77 2.15
3189 3586 8.066595 GCAATAAATTAGCCGATATGCTGATAG 58.933 37.037 0.00 0.00 42.77 2.08
3190 3587 9.317936 CAATAAATTAGCCGATATGCTGATAGA 57.682 33.333 0.00 0.00 42.77 1.98
3191 3588 8.879342 ATAAATTAGCCGATATGCTGATAGAC 57.121 34.615 0.00 0.00 42.77 2.59
3192 3589 6.537453 AATTAGCCGATATGCTGATAGACT 57.463 37.500 0.00 0.00 42.77 3.24
3193 3590 3.865011 AGCCGATATGCTGATAGACTG 57.135 47.619 0.00 0.00 40.90 3.51
3194 3591 2.495270 AGCCGATATGCTGATAGACTGG 59.505 50.000 0.00 0.00 40.90 4.00
3195 3592 2.232452 GCCGATATGCTGATAGACTGGT 59.768 50.000 0.00 0.00 0.00 4.00
3196 3593 3.306364 GCCGATATGCTGATAGACTGGTT 60.306 47.826 0.00 0.00 0.00 3.67
3197 3594 4.240888 CCGATATGCTGATAGACTGGTTG 58.759 47.826 0.00 0.00 0.00 3.77
3198 3595 4.021981 CCGATATGCTGATAGACTGGTTGA 60.022 45.833 0.00 0.00 0.00 3.18
3199 3596 5.337089 CCGATATGCTGATAGACTGGTTGAT 60.337 44.000 0.00 0.00 0.00 2.57
3200 3597 6.162079 CGATATGCTGATAGACTGGTTGATT 58.838 40.000 0.00 0.00 0.00 2.57
3201 3598 6.648310 CGATATGCTGATAGACTGGTTGATTT 59.352 38.462 0.00 0.00 0.00 2.17
3202 3599 7.814587 CGATATGCTGATAGACTGGTTGATTTA 59.185 37.037 0.00 0.00 0.00 1.40
3203 3600 8.839310 ATATGCTGATAGACTGGTTGATTTAC 57.161 34.615 0.00 0.00 0.00 2.01
3204 3601 5.428253 TGCTGATAGACTGGTTGATTTACC 58.572 41.667 0.00 0.00 38.73 2.85
3205 3602 4.816925 GCTGATAGACTGGTTGATTTACCC 59.183 45.833 0.00 0.00 37.39 3.69
3206 3603 5.367945 TGATAGACTGGTTGATTTACCCC 57.632 43.478 0.00 0.00 37.39 4.95
3207 3604 5.036916 TGATAGACTGGTTGATTTACCCCT 58.963 41.667 0.00 0.00 37.39 4.79
3208 3605 5.491078 TGATAGACTGGTTGATTTACCCCTT 59.509 40.000 0.00 0.00 37.39 3.95
3209 3606 6.674861 TGATAGACTGGTTGATTTACCCCTTA 59.325 38.462 0.00 0.00 37.39 2.69
3210 3607 7.349859 TGATAGACTGGTTGATTTACCCCTTAT 59.650 37.037 0.00 0.00 37.39 1.73
3211 3608 6.002653 AGACTGGTTGATTTACCCCTTATC 57.997 41.667 0.00 0.00 37.39 1.75
3212 3609 5.491078 AGACTGGTTGATTTACCCCTTATCA 59.509 40.000 0.00 0.00 37.39 2.15
3213 3610 6.160459 AGACTGGTTGATTTACCCCTTATCAT 59.840 38.462 0.00 0.00 37.39 2.45
3214 3611 6.129179 ACTGGTTGATTTACCCCTTATCATG 58.871 40.000 0.00 0.00 37.39 3.07
3215 3612 5.454062 TGGTTGATTTACCCCTTATCATGG 58.546 41.667 0.00 0.00 37.39 3.66
3221 3618 3.733709 CCCCTTATCATGGGTCAGC 57.266 57.895 0.00 0.00 43.09 4.26
3222 3619 0.111253 CCCCTTATCATGGGTCAGCC 59.889 60.000 0.00 0.00 43.09 4.85
3223 3620 0.250467 CCCTTATCATGGGTCAGCCG 60.250 60.000 0.00 0.00 39.82 5.52
3224 3621 0.250467 CCTTATCATGGGTCAGCCGG 60.250 60.000 0.00 0.00 34.97 6.13
3225 3622 0.469917 CTTATCATGGGTCAGCCGGT 59.530 55.000 1.90 0.00 34.97 5.28
3226 3623 1.691976 CTTATCATGGGTCAGCCGGTA 59.308 52.381 1.90 0.00 34.97 4.02
3227 3624 1.796017 TATCATGGGTCAGCCGGTAA 58.204 50.000 1.90 0.00 34.97 2.85
3228 3625 0.469917 ATCATGGGTCAGCCGGTAAG 59.530 55.000 1.90 0.00 34.97 2.34
3229 3626 0.907704 TCATGGGTCAGCCGGTAAGT 60.908 55.000 1.90 0.00 34.97 2.24
3230 3627 0.035439 CATGGGTCAGCCGGTAAGTT 60.035 55.000 1.90 0.00 34.97 2.66
3231 3628 0.696501 ATGGGTCAGCCGGTAAGTTT 59.303 50.000 1.90 0.00 34.97 2.66
3232 3629 0.035739 TGGGTCAGCCGGTAAGTTTC 59.964 55.000 1.90 0.00 34.97 2.78
3233 3630 0.675837 GGGTCAGCCGGTAAGTTTCC 60.676 60.000 1.90 0.00 34.97 3.13
3234 3631 1.017701 GGTCAGCCGGTAAGTTTCCG 61.018 60.000 13.53 13.53 46.49 4.30
3242 3639 3.302365 CGGTAAGTTTCCGGTAAGTGA 57.698 47.619 12.73 0.00 43.68 3.41
3243 3640 3.853475 CGGTAAGTTTCCGGTAAGTGAT 58.147 45.455 12.73 0.00 43.68 3.06
3244 3641 4.997565 CGGTAAGTTTCCGGTAAGTGATA 58.002 43.478 12.73 0.00 43.68 2.15
3245 3642 5.594926 CGGTAAGTTTCCGGTAAGTGATAT 58.405 41.667 12.73 0.00 43.68 1.63
3246 3643 5.689068 CGGTAAGTTTCCGGTAAGTGATATC 59.311 44.000 12.73 0.00 43.68 1.63
3247 3644 5.987953 GGTAAGTTTCCGGTAAGTGATATCC 59.012 44.000 0.00 0.00 0.00 2.59
3248 3645 4.684484 AGTTTCCGGTAAGTGATATCCC 57.316 45.455 0.00 0.00 0.00 3.85
3249 3646 3.390311 AGTTTCCGGTAAGTGATATCCCC 59.610 47.826 0.00 0.00 0.00 4.81
3250 3647 2.779429 TCCGGTAAGTGATATCCCCA 57.221 50.000 0.00 0.00 0.00 4.96
3251 3648 3.049108 TCCGGTAAGTGATATCCCCAA 57.951 47.619 0.00 0.00 0.00 4.12
3252 3649 2.701951 TCCGGTAAGTGATATCCCCAAC 59.298 50.000 0.00 0.00 0.00 3.77
3253 3650 2.436542 CCGGTAAGTGATATCCCCAACA 59.563 50.000 0.00 0.00 0.00 3.33
3254 3651 3.072476 CCGGTAAGTGATATCCCCAACAT 59.928 47.826 0.00 0.00 0.00 2.71
3255 3652 4.445735 CCGGTAAGTGATATCCCCAACATT 60.446 45.833 0.00 0.00 0.00 2.71
3256 3653 4.515191 CGGTAAGTGATATCCCCAACATTG 59.485 45.833 0.00 0.00 0.00 2.82
3257 3654 4.278419 GGTAAGTGATATCCCCAACATTGC 59.722 45.833 0.00 0.00 0.00 3.56
3258 3655 3.959495 AGTGATATCCCCAACATTGCT 57.041 42.857 0.00 0.00 0.00 3.91
3259 3656 4.255510 AGTGATATCCCCAACATTGCTT 57.744 40.909 0.00 0.00 0.00 3.91
3260 3657 4.210331 AGTGATATCCCCAACATTGCTTC 58.790 43.478 0.00 0.00 0.00 3.86
3261 3658 3.319122 GTGATATCCCCAACATTGCTTCC 59.681 47.826 0.00 0.00 0.00 3.46
3262 3659 3.053019 TGATATCCCCAACATTGCTTCCA 60.053 43.478 0.00 0.00 0.00 3.53
3263 3660 2.555732 ATCCCCAACATTGCTTCCAT 57.444 45.000 0.00 0.00 0.00 3.41
3264 3661 1.559368 TCCCCAACATTGCTTCCATG 58.441 50.000 0.00 0.00 0.00 3.66
3265 3662 1.076841 TCCCCAACATTGCTTCCATGA 59.923 47.619 0.00 0.00 0.00 3.07
3266 3663 1.205417 CCCCAACATTGCTTCCATGAC 59.795 52.381 0.00 0.00 0.00 3.06
3267 3664 1.894466 CCCAACATTGCTTCCATGACA 59.106 47.619 0.00 0.00 0.00 3.58
3268 3665 2.299582 CCCAACATTGCTTCCATGACAA 59.700 45.455 0.00 0.00 0.00 3.18
3269 3666 3.055675 CCCAACATTGCTTCCATGACAAT 60.056 43.478 0.00 0.00 34.42 2.71
3281 3678 3.759527 CATGACAATGGAGCAAGTCTG 57.240 47.619 0.00 0.00 32.41 3.51
3282 3679 2.189594 TGACAATGGAGCAAGTCTGG 57.810 50.000 0.00 0.00 32.41 3.86
3283 3680 1.699083 TGACAATGGAGCAAGTCTGGA 59.301 47.619 0.00 0.00 32.41 3.86
3284 3681 2.079925 GACAATGGAGCAAGTCTGGAC 58.920 52.381 0.00 0.00 0.00 4.02
3285 3682 1.081892 CAATGGAGCAAGTCTGGACG 58.918 55.000 0.00 0.00 36.20 4.79
3286 3683 0.036010 AATGGAGCAAGTCTGGACGG 60.036 55.000 0.00 0.00 36.20 4.79
3287 3684 2.435059 GGAGCAAGTCTGGACGGC 60.435 66.667 10.73 10.73 36.97 5.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.893637 CCGGACTGTTGGACTATGAAG 58.106 52.381 0.00 0.00 0.00 3.02
1 2 1.066430 GCCGGACTGTTGGACTATGAA 60.066 52.381 5.05 0.00 0.00 2.57
2 3 0.535335 GCCGGACTGTTGGACTATGA 59.465 55.000 5.05 0.00 0.00 2.15
3 4 0.462047 GGCCGGACTGTTGGACTATG 60.462 60.000 5.05 0.00 0.00 2.23
4 5 0.907704 TGGCCGGACTGTTGGACTAT 60.908 55.000 9.82 0.00 33.02 2.12
5 6 1.122632 TTGGCCGGACTGTTGGACTA 61.123 55.000 9.82 0.00 33.02 2.59
6 7 1.990160 TTTGGCCGGACTGTTGGACT 61.990 55.000 9.82 0.00 33.02 3.85
7 8 1.104577 TTTTGGCCGGACTGTTGGAC 61.105 55.000 9.82 1.90 0.00 4.02
8 9 0.178975 ATTTTGGCCGGACTGTTGGA 60.179 50.000 9.82 0.00 0.00 3.53
9 10 1.540267 TATTTTGGCCGGACTGTTGG 58.460 50.000 9.82 0.00 0.00 3.77
10 11 5.763204 ACTATATATTTTGGCCGGACTGTTG 59.237 40.000 9.82 0.00 0.00 3.33
11 12 5.937111 ACTATATATTTTGGCCGGACTGTT 58.063 37.500 9.82 0.00 0.00 3.16
12 13 5.512576 GGACTATATATTTTGGCCGGACTGT 60.513 44.000 9.82 0.00 0.00 3.55
13 14 4.935808 GGACTATATATTTTGGCCGGACTG 59.064 45.833 9.82 0.00 0.00 3.51
14 15 4.322499 CGGACTATATATTTTGGCCGGACT 60.322 45.833 9.82 0.00 34.29 3.85
15 16 3.930848 CGGACTATATATTTTGGCCGGAC 59.069 47.826 5.05 0.56 34.29 4.79
16 17 4.196626 CGGACTATATATTTTGGCCGGA 57.803 45.455 5.05 0.00 34.29 5.14
18 19 2.676342 GCCGGACTATATATTTTGGCCG 59.324 50.000 5.05 13.45 35.24 6.13
19 20 3.689649 CAGCCGGACTATATATTTTGGCC 59.310 47.826 5.05 0.00 42.14 5.36
20 21 4.324267 ACAGCCGGACTATATATTTTGGC 58.676 43.478 5.05 7.88 41.50 4.52
21 22 5.639506 CAGACAGCCGGACTATATATTTTGG 59.360 44.000 5.05 0.00 0.00 3.28
22 23 6.455647 TCAGACAGCCGGACTATATATTTTG 58.544 40.000 5.05 0.00 0.00 2.44
23 24 6.665992 TCAGACAGCCGGACTATATATTTT 57.334 37.500 5.05 0.00 0.00 1.82
24 25 6.665992 TTCAGACAGCCGGACTATATATTT 57.334 37.500 5.05 0.00 0.00 1.40
25 26 6.859112 ATTCAGACAGCCGGACTATATATT 57.141 37.500 5.05 0.00 0.00 1.28
26 27 6.321690 GGTATTCAGACAGCCGGACTATATAT 59.678 42.308 5.05 0.00 0.00 0.86
27 28 5.651139 GGTATTCAGACAGCCGGACTATATA 59.349 44.000 5.05 0.00 0.00 0.86
28 29 4.463186 GGTATTCAGACAGCCGGACTATAT 59.537 45.833 5.05 0.00 0.00 0.86
29 30 3.825014 GGTATTCAGACAGCCGGACTATA 59.175 47.826 5.05 0.00 0.00 1.31
30 31 2.628657 GGTATTCAGACAGCCGGACTAT 59.371 50.000 5.05 0.00 0.00 2.12
31 32 2.029623 GGTATTCAGACAGCCGGACTA 58.970 52.381 5.05 0.00 0.00 2.59
32 33 0.824759 GGTATTCAGACAGCCGGACT 59.175 55.000 5.05 0.00 0.00 3.85
33 34 0.179081 GGGTATTCAGACAGCCGGAC 60.179 60.000 5.05 0.00 0.00 4.79
34 35 1.335132 GGGGTATTCAGACAGCCGGA 61.335 60.000 5.05 0.00 32.95 5.14
35 36 1.146263 GGGGTATTCAGACAGCCGG 59.854 63.158 0.00 0.00 32.95 6.13
36 37 1.146263 GGGGGTATTCAGACAGCCG 59.854 63.158 0.00 0.00 32.95 5.52
37 38 1.802553 TAGGGGGTATTCAGACAGCC 58.197 55.000 0.00 0.00 0.00 4.85
38 39 4.141482 TGAATTAGGGGGTATTCAGACAGC 60.141 45.833 0.00 0.00 36.22 4.40
39 40 5.630415 TGAATTAGGGGGTATTCAGACAG 57.370 43.478 0.00 0.00 36.22 3.51
52 53 4.518583 CCTGAGGGAGTCCTGAATTAGGG 61.519 56.522 9.58 0.00 45.05 3.53
53 54 2.703007 CCTGAGGGAGTCCTGAATTAGG 59.297 54.545 9.58 5.08 45.05 2.69
68 69 0.982852 TACATGGAGTGGCCCTGAGG 60.983 60.000 0.00 0.00 35.97 3.86
69 70 0.911769 TTACATGGAGTGGCCCTGAG 59.088 55.000 0.00 0.00 35.97 3.35
70 71 0.618458 GTTACATGGAGTGGCCCTGA 59.382 55.000 0.00 0.00 35.97 3.86
71 72 0.394352 GGTTACATGGAGTGGCCCTG 60.394 60.000 0.00 0.00 38.18 4.45
72 73 1.571773 GGGTTACATGGAGTGGCCCT 61.572 60.000 0.00 0.00 40.33 5.19
78 79 2.344093 AGTGAGGGGTTACATGGAGT 57.656 50.000 0.00 0.00 0.00 3.85
96 97 3.705072 AGTCTCCCCTTTGGTATACGAAG 59.295 47.826 9.50 9.50 39.83 3.79
104 105 1.893210 CGAGAGAGTCTCCCCTTTGGT 60.893 57.143 16.74 0.00 40.34 3.67
150 151 0.037605 GTCGAAGGTGGTGGTAGGTG 60.038 60.000 0.00 0.00 0.00 4.00
198 199 6.154445 GCATGCTTTGGTATTCATAATCCTG 58.846 40.000 11.37 0.00 0.00 3.86
222 223 6.708054 ACTATCACTGAGTTCTGTTTGAAAGG 59.292 38.462 0.00 0.00 36.30 3.11
223 224 7.721286 ACTATCACTGAGTTCTGTTTGAAAG 57.279 36.000 0.00 0.00 36.30 2.62
235 236 9.344772 CTAAGGTACATCTAACTATCACTGAGT 57.655 37.037 0.00 0.00 0.00 3.41
246 247 6.338937 CCTTGTGGTCTAAGGTACATCTAAC 58.661 44.000 0.00 0.00 39.85 2.34
248 249 4.404715 GCCTTGTGGTCTAAGGTACATCTA 59.595 45.833 0.00 0.00 45.18 1.98
261 262 0.895100 TTGCTGATGGCCTTGTGGTC 60.895 55.000 3.32 0.00 40.92 4.02
264 265 1.546923 TGATTTGCTGATGGCCTTGTG 59.453 47.619 3.32 0.00 40.92 3.33
274 275 4.748892 TCGGTTTTTGTTTGATTTGCTGA 58.251 34.783 0.00 0.00 0.00 4.26
275 276 5.462034 TTCGGTTTTTGTTTGATTTGCTG 57.538 34.783 0.00 0.00 0.00 4.41
289 295 8.842280 TGTGTTCTTCTGTATTAATTCGGTTTT 58.158 29.630 0.00 0.00 0.00 2.43
295 301 8.287503 ACGGTTTGTGTTCTTCTGTATTAATTC 58.712 33.333 0.00 0.00 0.00 2.17
456 700 2.296190 ACCGACCATTTTTCTTCTTGGC 59.704 45.455 0.00 0.00 32.26 4.52
457 701 3.305335 CCACCGACCATTTTTCTTCTTGG 60.305 47.826 0.00 0.00 35.31 3.61
463 707 2.235891 GTTCCCACCGACCATTTTTCT 58.764 47.619 0.00 0.00 0.00 2.52
503 747 3.438781 TGAAGGTATTGTTCGTCCAATGC 59.561 43.478 11.00 9.73 35.85 3.56
595 842 0.740868 CACCGACGCACAATCTGGAT 60.741 55.000 0.00 0.00 0.00 3.41
596 843 1.374125 CACCGACGCACAATCTGGA 60.374 57.895 0.00 0.00 0.00 3.86
605 852 4.063967 CTAGTGGCCACCGACGCA 62.064 66.667 32.29 9.72 0.00 5.24
665 918 0.249868 TCCAGTTTCTGTGTGCGGAG 60.250 55.000 0.00 0.00 0.00 4.63
666 919 0.249868 CTCCAGTTTCTGTGTGCGGA 60.250 55.000 0.00 0.00 0.00 5.54
667 920 1.230635 CCTCCAGTTTCTGTGTGCGG 61.231 60.000 0.00 0.00 0.00 5.69
901 1154 0.108089 TTTATAAGCGCCGCTGACCA 60.108 50.000 14.52 0.00 39.62 4.02
936 1217 1.065418 GGAGGAAATGGAGGAAAGCGA 60.065 52.381 0.00 0.00 0.00 4.93
983 1264 1.419387 CCATGATCTCCCACTCCCTTC 59.581 57.143 0.00 0.00 0.00 3.46
1057 1341 2.359478 GGTGACGGCGGAAATGGT 60.359 61.111 13.24 0.00 0.00 3.55
1225 1540 1.497309 AACCCGGAAATCTCCCAGCA 61.497 55.000 0.73 0.00 38.71 4.41
1236 1551 0.827089 TGTACTCCACGAACCCGGAA 60.827 55.000 0.73 0.00 40.78 4.30
1410 1725 0.108804 CGTTAAGCTTCTCGGCCTGA 60.109 55.000 0.00 0.00 0.00 3.86
1425 1740 2.953821 GGGTCGACCGACACGTTA 59.046 61.111 27.68 0.00 46.20 3.18
1588 1903 3.330853 GATGGCGACGGCGATGAC 61.331 66.667 18.90 8.16 37.76 3.06
1652 2001 5.670149 CATGATCTTGACATGCTAGGAAC 57.330 43.478 2.43 0.00 38.58 3.62
1698 2074 6.243900 AGATTTCCAAACTGATCACTGTGAT 58.756 36.000 22.45 22.45 40.34 3.06
1703 2079 7.550906 GCTAGTTAGATTTCCAAACTGATCACT 59.449 37.037 0.00 0.00 35.23 3.41
1704 2080 7.550906 AGCTAGTTAGATTTCCAAACTGATCAC 59.449 37.037 0.00 0.00 35.23 3.06
2276 2657 9.740239 AAAGATAGATATACGCTACAAACGAAA 57.260 29.630 0.00 0.00 0.00 3.46
2278 2659 9.740239 AAAAAGATAGATATACGCTACAAACGA 57.260 29.630 0.00 0.00 0.00 3.85
2315 2697 1.738030 CGGTACAACGGATGAACTCCC 60.738 57.143 0.00 0.00 41.49 4.30
2327 2709 2.748647 AATGCCGGCCGGTACAAC 60.749 61.111 42.53 27.09 37.65 3.32
2385 2771 3.238241 CACGCGACTAACGAGCCG 61.238 66.667 15.93 0.00 45.03 5.52
2387 2773 1.396543 CTGACACGCGACTAACGAGC 61.397 60.000 15.93 0.00 45.03 5.03
2405 2791 2.000701 TCATTGATGCCCGGTCCCT 61.001 57.895 0.00 0.00 0.00 4.20
2409 2795 0.251121 TTGTGTCATTGATGCCCGGT 60.251 50.000 0.00 0.00 0.00 5.28
2410 2796 1.105457 ATTGTGTCATTGATGCCCGG 58.895 50.000 0.00 0.00 0.00 5.73
2411 2797 5.885230 ATATATTGTGTCATTGATGCCCG 57.115 39.130 0.00 0.00 0.00 6.13
2412 2798 8.109705 TGTTATATATTGTGTCATTGATGCCC 57.890 34.615 0.00 0.00 0.00 5.36
2413 2799 8.786898 ACTGTTATATATTGTGTCATTGATGCC 58.213 33.333 0.00 0.00 0.00 4.40
2446 2832 0.776451 CGTCGTTGAAGTCTCCGTTG 59.224 55.000 0.00 0.00 0.00 4.10
2472 2858 3.081409 AATAGCCCACGCGGAGGT 61.081 61.111 12.47 6.65 41.18 3.85
2475 2861 1.615165 TTACCAATAGCCCACGCGGA 61.615 55.000 12.47 0.00 41.18 5.54
2477 2863 1.157870 CCTTACCAATAGCCCACGCG 61.158 60.000 3.53 3.53 41.18 6.01
2500 2886 1.517832 CCACACCCCGCAACAAAAA 59.482 52.632 0.00 0.00 0.00 1.94
2501 2887 2.427245 CCCACACCCCGCAACAAAA 61.427 57.895 0.00 0.00 0.00 2.44
2502 2888 2.835431 CCCACACCCCGCAACAAA 60.835 61.111 0.00 0.00 0.00 2.83
2505 2891 2.260088 TATAGCCCACACCCCGCAAC 62.260 60.000 0.00 0.00 0.00 4.17
2506 2892 1.349542 ATATAGCCCACACCCCGCAA 61.350 55.000 0.00 0.00 0.00 4.85
2507 2893 1.768482 ATATAGCCCACACCCCGCA 60.768 57.895 0.00 0.00 0.00 5.69
2508 2894 1.302511 CATATAGCCCACACCCCGC 60.303 63.158 0.00 0.00 0.00 6.13
2509 2895 1.344065 TACATATAGCCCACACCCCG 58.656 55.000 0.00 0.00 0.00 5.73
2510 2896 2.709397 ACTTACATATAGCCCACACCCC 59.291 50.000 0.00 0.00 0.00 4.95
2511 2897 4.134563 CAACTTACATATAGCCCACACCC 58.865 47.826 0.00 0.00 0.00 4.61
2512 2898 3.564225 GCAACTTACATATAGCCCACACC 59.436 47.826 0.00 0.00 0.00 4.16
2513 2899 4.451900 AGCAACTTACATATAGCCCACAC 58.548 43.478 0.00 0.00 0.00 3.82
2514 2900 4.703897 GAGCAACTTACATATAGCCCACA 58.296 43.478 0.00 0.00 0.00 4.17
2515 2901 3.741344 CGAGCAACTTACATATAGCCCAC 59.259 47.826 0.00 0.00 0.00 4.61
2516 2902 3.639561 TCGAGCAACTTACATATAGCCCA 59.360 43.478 0.00 0.00 0.00 5.36
2517 2903 4.252971 TCGAGCAACTTACATATAGCCC 57.747 45.455 0.00 0.00 0.00 5.19
2518 2904 6.598753 TTTTCGAGCAACTTACATATAGCC 57.401 37.500 0.00 0.00 0.00 3.93
2519 2905 9.503427 AAAATTTTCGAGCAACTTACATATAGC 57.497 29.630 0.00 0.00 0.00 2.97
2523 2909 9.820229 CTGTAAAATTTTCGAGCAACTTACATA 57.180 29.630 6.72 0.00 30.17 2.29
2524 2910 8.564574 TCTGTAAAATTTTCGAGCAACTTACAT 58.435 29.630 6.72 0.00 30.17 2.29
2525 2911 7.921787 TCTGTAAAATTTTCGAGCAACTTACA 58.078 30.769 6.72 1.52 0.00 2.41
2546 2932 6.091305 CACACTCAAAATCGACATACATCTGT 59.909 38.462 0.00 0.00 0.00 3.41
2549 2935 5.727791 GCCACACTCAAAATCGACATACATC 60.728 44.000 0.00 0.00 0.00 3.06
2550 2936 4.094887 GCCACACTCAAAATCGACATACAT 59.905 41.667 0.00 0.00 0.00 2.29
2551 2937 3.435327 GCCACACTCAAAATCGACATACA 59.565 43.478 0.00 0.00 0.00 2.29
2555 2941 2.254546 AGCCACACTCAAAATCGACA 57.745 45.000 0.00 0.00 0.00 4.35
2573 2959 1.895798 TCTCAGTTGAGTGGCACCTAG 59.104 52.381 15.27 1.85 42.60 3.02
2574 2960 2.009681 TCTCAGTTGAGTGGCACCTA 57.990 50.000 15.27 0.00 42.60 3.08
2575 2961 1.356124 ATCTCAGTTGAGTGGCACCT 58.644 50.000 15.27 0.49 42.60 4.00
2576 2962 2.191128 AATCTCAGTTGAGTGGCACC 57.809 50.000 15.27 6.59 42.60 5.01
2577 2963 5.886960 ATTAAATCTCAGTTGAGTGGCAC 57.113 39.130 10.29 10.29 42.60 5.01
2578 2964 7.665559 ACTTTATTAAATCTCAGTTGAGTGGCA 59.334 33.333 8.85 0.00 42.60 4.92
2579 2965 8.045176 ACTTTATTAAATCTCAGTTGAGTGGC 57.955 34.615 8.85 0.00 42.60 5.01
2580 2966 9.442047 AGACTTTATTAAATCTCAGTTGAGTGG 57.558 33.333 8.85 0.00 42.60 4.00
2593 2979 9.778741 TGTCACTTGACTGAGACTTTATTAAAT 57.221 29.630 10.63 0.00 44.99 1.40
2594 2980 9.778741 ATGTCACTTGACTGAGACTTTATTAAA 57.221 29.630 10.63 0.00 44.99 1.52
2597 2983 7.547370 GCTATGTCACTTGACTGAGACTTTATT 59.453 37.037 10.63 0.00 44.99 1.40
2599 2985 6.015434 TGCTATGTCACTTGACTGAGACTTTA 60.015 38.462 10.63 0.00 44.99 1.85
2600 2986 5.221521 TGCTATGTCACTTGACTGAGACTTT 60.222 40.000 10.63 0.00 44.99 2.66
2601 2987 4.281941 TGCTATGTCACTTGACTGAGACTT 59.718 41.667 10.63 0.00 44.99 3.01
2602 2988 3.829026 TGCTATGTCACTTGACTGAGACT 59.171 43.478 10.63 0.00 44.99 3.24
2603 2989 4.179926 TGCTATGTCACTTGACTGAGAC 57.820 45.455 10.63 0.00 44.99 3.36
2604 2990 4.752146 CATGCTATGTCACTTGACTGAGA 58.248 43.478 10.63 0.00 44.99 3.27
2605 2991 3.309138 GCATGCTATGTCACTTGACTGAG 59.691 47.826 11.37 8.39 44.99 3.35
2606 2992 3.264947 GCATGCTATGTCACTTGACTGA 58.735 45.455 11.37 0.00 44.99 3.41
2607 2993 3.004862 TGCATGCTATGTCACTTGACTG 58.995 45.455 20.33 1.04 44.99 3.51
2608 2994 3.005554 GTGCATGCTATGTCACTTGACT 58.994 45.455 20.33 0.00 44.99 3.41
2609 2995 3.005554 AGTGCATGCTATGTCACTTGAC 58.994 45.455 20.33 3.68 41.46 3.18
2610 2996 3.004862 CAGTGCATGCTATGTCACTTGA 58.995 45.455 20.33 0.00 41.92 3.02
2611 2997 3.004862 TCAGTGCATGCTATGTCACTTG 58.995 45.455 20.33 7.74 41.92 3.16
2612 2998 3.339253 TCAGTGCATGCTATGTCACTT 57.661 42.857 20.33 0.00 41.92 3.16
2613 2999 3.339253 TTCAGTGCATGCTATGTCACT 57.661 42.857 20.33 9.83 43.39 3.41
2614 3000 4.154737 TCTTTTCAGTGCATGCTATGTCAC 59.845 41.667 20.33 7.39 37.48 3.67
2615 3001 4.325972 TCTTTTCAGTGCATGCTATGTCA 58.674 39.130 20.33 6.30 0.00 3.58
2616 3002 4.952262 TCTTTTCAGTGCATGCTATGTC 57.048 40.909 20.33 4.45 0.00 3.06
2617 3003 5.710513 TTTCTTTTCAGTGCATGCTATGT 57.289 34.783 20.33 0.00 0.00 2.29
2618 3004 7.591006 AATTTTCTTTTCAGTGCATGCTATG 57.409 32.000 20.33 16.86 0.00 2.23
2620 3006 8.977505 GTAAAATTTTCTTTTCAGTGCATGCTA 58.022 29.630 20.33 2.15 0.00 3.49
2621 3007 6.930667 AAAATTTTCTTTTCAGTGCATGCT 57.069 29.167 20.33 0.00 0.00 3.79
2622 3008 7.629130 TGTAAAATTTTCTTTTCAGTGCATGC 58.371 30.769 11.82 11.82 0.00 4.06
2623 3009 9.588774 CATGTAAAATTTTCTTTTCAGTGCATG 57.411 29.630 6.72 2.44 0.00 4.06
2624 3010 8.776470 CCATGTAAAATTTTCTTTTCAGTGCAT 58.224 29.630 6.72 0.00 0.00 3.96
2625 3011 7.984050 TCCATGTAAAATTTTCTTTTCAGTGCA 59.016 29.630 6.72 0.00 0.00 4.57
2626 3012 8.364129 TCCATGTAAAATTTTCTTTTCAGTGC 57.636 30.769 6.72 0.00 0.00 4.40
2643 3029 9.904198 TGAAATCTTACATTGAGATCCATGTAA 57.096 29.630 15.00 15.00 37.21 2.41
2644 3030 9.330063 GTGAAATCTTACATTGAGATCCATGTA 57.670 33.333 3.35 3.35 32.86 2.29
2645 3031 7.011763 CGTGAAATCTTACATTGAGATCCATGT 59.988 37.037 5.08 5.08 32.86 3.21
2646 3032 7.225341 TCGTGAAATCTTACATTGAGATCCATG 59.775 37.037 0.00 0.00 32.86 3.66
2647 3033 7.275183 TCGTGAAATCTTACATTGAGATCCAT 58.725 34.615 0.00 0.00 32.86 3.41
2648 3034 6.639563 TCGTGAAATCTTACATTGAGATCCA 58.360 36.000 0.00 0.00 32.86 3.41
2649 3035 7.539712 TTCGTGAAATCTTACATTGAGATCC 57.460 36.000 0.00 0.00 32.86 3.36
2654 3040 9.541143 TGCTATATTCGTGAAATCTTACATTGA 57.459 29.630 0.00 0.00 0.00 2.57
2657 3043 9.710900 TGATGCTATATTCGTGAAATCTTACAT 57.289 29.630 0.00 0.00 0.00 2.29
2658 3044 8.978539 GTGATGCTATATTCGTGAAATCTTACA 58.021 33.333 0.00 0.00 0.00 2.41
2659 3045 9.197694 AGTGATGCTATATTCGTGAAATCTTAC 57.802 33.333 0.00 0.00 0.00 2.34
2660 3046 9.196552 CAGTGATGCTATATTCGTGAAATCTTA 57.803 33.333 0.00 0.00 0.00 2.10
2661 3047 7.928167 TCAGTGATGCTATATTCGTGAAATCTT 59.072 33.333 0.00 0.00 0.00 2.40
2662 3048 7.436933 TCAGTGATGCTATATTCGTGAAATCT 58.563 34.615 0.00 0.00 0.00 2.40
2663 3049 7.643528 TCAGTGATGCTATATTCGTGAAATC 57.356 36.000 0.00 0.00 0.00 2.17
2664 3050 8.338259 GTTTCAGTGATGCTATATTCGTGAAAT 58.662 33.333 0.00 0.00 33.57 2.17
2665 3051 7.549134 AGTTTCAGTGATGCTATATTCGTGAAA 59.451 33.333 0.00 0.00 30.83 2.69
2666 3052 7.041721 AGTTTCAGTGATGCTATATTCGTGAA 58.958 34.615 0.00 0.00 0.00 3.18
2667 3053 6.573434 AGTTTCAGTGATGCTATATTCGTGA 58.427 36.000 0.00 0.00 0.00 4.35
2668 3054 6.834959 AGTTTCAGTGATGCTATATTCGTG 57.165 37.500 0.00 0.00 0.00 4.35
2669 3055 7.041721 TCAAGTTTCAGTGATGCTATATTCGT 58.958 34.615 0.00 0.00 0.00 3.85
2670 3056 7.436376 TCTCAAGTTTCAGTGATGCTATATTCG 59.564 37.037 0.00 0.00 0.00 3.34
2671 3057 8.654230 TCTCAAGTTTCAGTGATGCTATATTC 57.346 34.615 0.00 0.00 0.00 1.75
2672 3058 9.624373 AATCTCAAGTTTCAGTGATGCTATATT 57.376 29.630 0.00 0.00 0.00 1.28
2673 3059 9.624373 AAATCTCAAGTTTCAGTGATGCTATAT 57.376 29.630 0.00 0.00 0.00 0.86
2675 3061 7.934855 AAATCTCAAGTTTCAGTGATGCTAT 57.065 32.000 0.00 0.00 0.00 2.97
2676 3062 8.097038 ACTAAATCTCAAGTTTCAGTGATGCTA 58.903 33.333 0.00 0.00 0.00 3.49
2677 3063 6.939163 ACTAAATCTCAAGTTTCAGTGATGCT 59.061 34.615 0.00 0.00 0.00 3.79
2678 3064 7.138692 ACTAAATCTCAAGTTTCAGTGATGC 57.861 36.000 0.00 0.00 0.00 3.91
2695 3081 9.968743 CGTTTCCTACAACAATCTTACTAAATC 57.031 33.333 0.00 0.00 0.00 2.17
2696 3082 8.943002 CCGTTTCCTACAACAATCTTACTAAAT 58.057 33.333 0.00 0.00 0.00 1.40
2697 3083 7.095102 GCCGTTTCCTACAACAATCTTACTAAA 60.095 37.037 0.00 0.00 0.00 1.85
2698 3084 6.369615 GCCGTTTCCTACAACAATCTTACTAA 59.630 38.462 0.00 0.00 0.00 2.24
2699 3085 5.870978 GCCGTTTCCTACAACAATCTTACTA 59.129 40.000 0.00 0.00 0.00 1.82
2700 3086 4.694037 GCCGTTTCCTACAACAATCTTACT 59.306 41.667 0.00 0.00 0.00 2.24
2701 3087 4.694037 AGCCGTTTCCTACAACAATCTTAC 59.306 41.667 0.00 0.00 0.00 2.34
2702 3088 4.901868 AGCCGTTTCCTACAACAATCTTA 58.098 39.130 0.00 0.00 0.00 2.10
2703 3089 3.751518 AGCCGTTTCCTACAACAATCTT 58.248 40.909 0.00 0.00 0.00 2.40
2704 3090 3.418684 AGCCGTTTCCTACAACAATCT 57.581 42.857 0.00 0.00 0.00 2.40
2705 3091 3.500680 TCAAGCCGTTTCCTACAACAATC 59.499 43.478 0.00 0.00 0.00 2.67
2706 3092 3.482436 TCAAGCCGTTTCCTACAACAAT 58.518 40.909 0.00 0.00 0.00 2.71
2707 3093 2.920524 TCAAGCCGTTTCCTACAACAA 58.079 42.857 0.00 0.00 0.00 2.83
2708 3094 2.623878 TCAAGCCGTTTCCTACAACA 57.376 45.000 0.00 0.00 0.00 3.33
2713 3099 4.464951 TCTTCTACATCAAGCCGTTTCCTA 59.535 41.667 0.00 0.00 0.00 2.94
2725 3111 4.020751 GGCTCCTATGCATCTTCTACATCA 60.021 45.833 0.19 0.00 34.04 3.07
2732 3118 2.502295 CAAGGGCTCCTATGCATCTTC 58.498 52.381 0.19 0.00 31.13 2.87
2745 3131 3.306780 CGTCCGATTTATATCCAAGGGCT 60.307 47.826 0.00 0.00 0.00 5.19
2752 3138 6.980051 ATTTTAGCCGTCCGATTTATATCC 57.020 37.500 0.00 0.00 0.00 2.59
2756 3142 6.479660 TCGTTTATTTTAGCCGTCCGATTTAT 59.520 34.615 0.00 0.00 0.00 1.40
2767 3153 8.730970 TTTGTATGTTGTCGTTTATTTTAGCC 57.269 30.769 0.00 0.00 0.00 3.93
2821 3207 0.177141 TAATATATGGAGCGCGGGGC 59.823 55.000 8.83 9.26 44.05 5.80
2822 3208 2.676342 GTTTAATATATGGAGCGCGGGG 59.324 50.000 8.83 0.00 0.00 5.73
2823 3209 3.124636 GTGTTTAATATATGGAGCGCGGG 59.875 47.826 8.83 0.00 0.00 6.13
2824 3210 3.743911 TGTGTTTAATATATGGAGCGCGG 59.256 43.478 8.83 0.00 0.00 6.46
2825 3211 4.983215 TGTGTTTAATATATGGAGCGCG 57.017 40.909 0.00 0.00 0.00 6.86
2826 3212 6.413818 GTGTTTGTGTTTAATATATGGAGCGC 59.586 38.462 0.00 0.00 0.00 5.92
2827 3213 7.468441 TGTGTTTGTGTTTAATATATGGAGCG 58.532 34.615 0.00 0.00 0.00 5.03
2828 3214 9.801873 AATGTGTTTGTGTTTAATATATGGAGC 57.198 29.630 0.00 0.00 0.00 4.70
2845 3231 7.912773 TGTTTGATGTGTAGTACAATGTGTTTG 59.087 33.333 4.11 0.00 43.77 2.93
2846 3232 7.990917 TGTTTGATGTGTAGTACAATGTGTTT 58.009 30.769 4.11 0.00 43.77 2.83
2847 3233 7.561021 TGTTTGATGTGTAGTACAATGTGTT 57.439 32.000 4.11 0.00 43.77 3.32
2848 3234 7.584108 CATGTTTGATGTGTAGTACAATGTGT 58.416 34.615 4.11 0.00 43.77 3.72
2849 3235 6.524239 GCATGTTTGATGTGTAGTACAATGTG 59.476 38.462 4.11 0.00 43.77 3.21
2850 3236 6.611381 GCATGTTTGATGTGTAGTACAATGT 58.389 36.000 4.11 0.00 43.77 2.71
2851 3237 5.734035 CGCATGTTTGATGTGTAGTACAATG 59.266 40.000 4.11 3.96 43.77 2.82
2852 3238 5.673568 GCGCATGTTTGATGTGTAGTACAAT 60.674 40.000 4.11 1.37 43.77 2.71
2853 3239 4.377943 GCGCATGTTTGATGTGTAGTACAA 60.378 41.667 4.11 0.00 43.77 2.41
2854 3240 3.124466 GCGCATGTTTGATGTGTAGTACA 59.876 43.478 0.30 0.00 44.87 2.90
2855 3241 3.124466 TGCGCATGTTTGATGTGTAGTAC 59.876 43.478 5.66 0.00 32.53 2.73
2856 3242 3.124466 GTGCGCATGTTTGATGTGTAGTA 59.876 43.478 15.91 0.00 32.53 1.82
2857 3243 2.095768 GTGCGCATGTTTGATGTGTAGT 60.096 45.455 15.91 0.00 32.53 2.73
2858 3244 2.508867 GTGCGCATGTTTGATGTGTAG 58.491 47.619 15.91 0.00 32.53 2.74
2859 3245 1.198867 GGTGCGCATGTTTGATGTGTA 59.801 47.619 15.91 0.00 32.53 2.90
2860 3246 0.039256 GGTGCGCATGTTTGATGTGT 60.039 50.000 15.91 0.00 32.53 3.72
2861 3247 0.039346 TGGTGCGCATGTTTGATGTG 60.039 50.000 15.91 0.00 0.00 3.21
2862 3248 0.241749 CTGGTGCGCATGTTTGATGT 59.758 50.000 15.91 0.00 0.00 3.06
2863 3249 0.241749 ACTGGTGCGCATGTTTGATG 59.758 50.000 15.91 0.91 0.00 3.07
2864 3250 1.819928 TACTGGTGCGCATGTTTGAT 58.180 45.000 15.91 0.00 0.00 2.57
2865 3251 1.468127 CATACTGGTGCGCATGTTTGA 59.532 47.619 15.91 0.00 0.00 2.69
2869 3255 2.042686 AATCATACTGGTGCGCATGT 57.957 45.000 15.91 15.75 0.00 3.21
2916 3304 1.344438 AGTGACTGTCGATGGCTTTCA 59.656 47.619 2.98 0.00 0.00 2.69
2937 3325 0.740737 GACCAAGCAAGCACTTGTGT 59.259 50.000 11.77 9.41 44.55 3.72
2942 3330 0.181114 TGTGAGACCAAGCAAGCACT 59.819 50.000 0.00 0.00 0.00 4.40
2945 3333 1.242076 ATGTGTGAGACCAAGCAAGC 58.758 50.000 0.00 0.00 0.00 4.01
2968 3365 1.145759 AACCGATGCTGCGACATACG 61.146 55.000 0.00 0.00 45.66 3.06
2970 3367 1.006086 CAAACCGATGCTGCGACATA 58.994 50.000 0.00 0.00 0.00 2.29
2972 3369 0.882484 TTCAAACCGATGCTGCGACA 60.882 50.000 0.00 0.00 0.00 4.35
2975 3372 0.729140 GGTTTCAAACCGATGCTGCG 60.729 55.000 2.78 0.00 42.62 5.18
2976 3373 3.107017 GGTTTCAAACCGATGCTGC 57.893 52.632 2.78 0.00 42.62 5.25
2993 3390 8.885494 TCTATGGAAAGTTTGTTTTTGATTGG 57.115 30.769 0.00 0.00 0.00 3.16
3011 3408 9.676861 CTGGAATGCAGATATTATTTCTATGGA 57.323 33.333 0.00 0.00 0.00 3.41
3026 3423 4.802051 GCCCGCCTGGAATGCAGA 62.802 66.667 2.50 0.00 37.49 4.26
3042 3439 2.049248 CATGTGGGCAAACACCGC 60.049 61.111 3.46 0.00 40.62 5.68
3043 3440 1.172180 AGACATGTGGGCAAACACCG 61.172 55.000 1.15 0.00 40.62 4.94
3044 3441 1.000274 GAAGACATGTGGGCAAACACC 60.000 52.381 1.15 0.00 40.62 4.16
3045 3442 1.000274 GGAAGACATGTGGGCAAACAC 60.000 52.381 1.15 0.00 41.68 3.32
3046 3443 1.327303 GGAAGACATGTGGGCAAACA 58.673 50.000 1.15 0.00 0.00 2.83
3047 3444 1.327303 TGGAAGACATGTGGGCAAAC 58.673 50.000 1.15 0.00 0.00 2.93
3048 3445 1.962807 CTTGGAAGACATGTGGGCAAA 59.037 47.619 1.15 0.00 0.00 3.68
3049 3446 1.619654 CTTGGAAGACATGTGGGCAA 58.380 50.000 1.15 0.00 0.00 4.52
3050 3447 0.895100 GCTTGGAAGACATGTGGGCA 60.895 55.000 1.15 0.00 0.00 5.36
3051 3448 0.895100 TGCTTGGAAGACATGTGGGC 60.895 55.000 1.15 0.00 0.00 5.36
3052 3449 0.883833 GTGCTTGGAAGACATGTGGG 59.116 55.000 1.15 0.00 0.00 4.61
3053 3450 1.538512 CAGTGCTTGGAAGACATGTGG 59.461 52.381 1.15 0.00 0.00 4.17
3054 3451 2.224606 ACAGTGCTTGGAAGACATGTG 58.775 47.619 1.15 0.00 0.00 3.21
3055 3452 2.645838 ACAGTGCTTGGAAGACATGT 57.354 45.000 0.00 0.00 0.00 3.21
3056 3453 2.880268 TGAACAGTGCTTGGAAGACATG 59.120 45.455 0.00 0.00 0.00 3.21
3057 3454 3.213206 TGAACAGTGCTTGGAAGACAT 57.787 42.857 0.00 0.00 0.00 3.06
3058 3455 2.708216 TGAACAGTGCTTGGAAGACA 57.292 45.000 0.00 0.00 0.00 3.41
3059 3456 3.206150 TCTTGAACAGTGCTTGGAAGAC 58.794 45.455 0.00 0.00 0.00 3.01
3060 3457 3.558931 TCTTGAACAGTGCTTGGAAGA 57.441 42.857 0.00 0.00 0.00 2.87
3061 3458 5.879223 AGATATCTTGAACAGTGCTTGGAAG 59.121 40.000 0.00 0.00 0.00 3.46
3062 3459 5.809001 AGATATCTTGAACAGTGCTTGGAA 58.191 37.500 0.00 0.00 0.00 3.53
3063 3460 5.426689 AGATATCTTGAACAGTGCTTGGA 57.573 39.130 0.00 0.00 0.00 3.53
3064 3461 5.879223 AGAAGATATCTTGAACAGTGCTTGG 59.121 40.000 22.61 0.00 33.39 3.61
3065 3462 6.981762 AGAAGATATCTTGAACAGTGCTTG 57.018 37.500 22.61 0.00 33.39 4.01
3066 3463 9.678260 AATTAGAAGATATCTTGAACAGTGCTT 57.322 29.630 22.61 4.47 39.71 3.91
3067 3464 9.678260 AAATTAGAAGATATCTTGAACAGTGCT 57.322 29.630 22.61 12.41 39.71 4.40
3072 3469 9.884636 TCGGAAAATTAGAAGATATCTTGAACA 57.115 29.630 22.61 4.42 39.71 3.18
3101 3498 4.271049 CAGACAGCGATAAATCAACCGATT 59.729 41.667 0.00 0.00 43.94 3.34
3102 3499 3.804325 CAGACAGCGATAAATCAACCGAT 59.196 43.478 0.00 0.00 0.00 4.18
3103 3500 3.119280 TCAGACAGCGATAAATCAACCGA 60.119 43.478 0.00 0.00 0.00 4.69
3104 3501 3.000322 GTCAGACAGCGATAAATCAACCG 60.000 47.826 0.00 0.00 0.00 4.44
3105 3502 4.033358 CAGTCAGACAGCGATAAATCAACC 59.967 45.833 2.66 0.00 0.00 3.77
3106 3503 4.864806 TCAGTCAGACAGCGATAAATCAAC 59.135 41.667 2.66 0.00 0.00 3.18
3107 3504 5.072040 TCAGTCAGACAGCGATAAATCAA 57.928 39.130 2.66 0.00 0.00 2.57
3108 3505 4.718940 TCAGTCAGACAGCGATAAATCA 57.281 40.909 2.66 0.00 0.00 2.57
3109 3506 7.142021 TCTTATCAGTCAGACAGCGATAAATC 58.858 38.462 15.51 0.00 30.44 2.17
3110 3507 7.043961 TCTTATCAGTCAGACAGCGATAAAT 57.956 36.000 15.51 0.00 30.44 1.40
3111 3508 6.451064 TCTTATCAGTCAGACAGCGATAAA 57.549 37.500 15.51 8.45 30.44 1.40
3112 3509 6.641169 ATCTTATCAGTCAGACAGCGATAA 57.359 37.500 2.66 10.62 0.00 1.75
3113 3510 7.745620 TTATCTTATCAGTCAGACAGCGATA 57.254 36.000 2.66 3.59 0.00 2.92
3114 3511 6.641169 TTATCTTATCAGTCAGACAGCGAT 57.359 37.500 2.66 4.54 0.00 4.58
3115 3512 6.451064 TTTATCTTATCAGTCAGACAGCGA 57.549 37.500 2.66 0.00 0.00 4.93
3116 3513 6.087423 CGATTTATCTTATCAGTCAGACAGCG 59.913 42.308 2.66 0.00 0.00 5.18
3117 3514 7.114247 GTCGATTTATCTTATCAGTCAGACAGC 59.886 40.741 2.66 0.00 0.00 4.40
3118 3515 7.593273 GGTCGATTTATCTTATCAGTCAGACAG 59.407 40.741 2.66 0.00 0.00 3.51
3119 3516 7.068226 TGGTCGATTTATCTTATCAGTCAGACA 59.932 37.037 2.66 0.00 0.00 3.41
3120 3517 7.426410 TGGTCGATTTATCTTATCAGTCAGAC 58.574 38.462 0.00 0.00 0.00 3.51
3121 3518 7.582667 TGGTCGATTTATCTTATCAGTCAGA 57.417 36.000 0.00 0.00 0.00 3.27
3122 3519 8.824159 ATTGGTCGATTTATCTTATCAGTCAG 57.176 34.615 0.00 0.00 0.00 3.51
3130 3527 8.999431 GGCTGATTTATTGGTCGATTTATCTTA 58.001 33.333 0.00 0.00 0.00 2.10
3131 3528 7.307989 CGGCTGATTTATTGGTCGATTTATCTT 60.308 37.037 0.00 0.00 0.00 2.40
3132 3529 6.147821 CGGCTGATTTATTGGTCGATTTATCT 59.852 38.462 0.00 0.00 0.00 1.98
3133 3530 6.147164 TCGGCTGATTTATTGGTCGATTTATC 59.853 38.462 0.00 0.00 30.88 1.75
3134 3531 5.995282 TCGGCTGATTTATTGGTCGATTTAT 59.005 36.000 0.00 0.00 30.88 1.40
3135 3532 5.361427 TCGGCTGATTTATTGGTCGATTTA 58.639 37.500 0.00 0.00 30.88 1.40
3136 3533 4.196193 TCGGCTGATTTATTGGTCGATTT 58.804 39.130 0.00 0.00 30.88 2.17
3137 3534 3.804036 TCGGCTGATTTATTGGTCGATT 58.196 40.909 0.00 0.00 30.88 3.34
3138 3535 3.469008 TCGGCTGATTTATTGGTCGAT 57.531 42.857 0.00 0.00 30.88 3.59
3139 3536 2.971660 TCGGCTGATTTATTGGTCGA 57.028 45.000 0.00 0.00 33.43 4.20
3140 3537 4.093408 CCATATCGGCTGATTTATTGGTCG 59.907 45.833 14.52 0.00 35.99 4.79
3141 3538 5.551760 CCATATCGGCTGATTTATTGGTC 57.448 43.478 14.52 0.00 35.99 4.02
3155 3552 4.634004 TCGGCTAATTTATTGCCATATCGG 59.366 41.667 0.00 0.00 46.39 4.18
3156 3553 5.794687 TCGGCTAATTTATTGCCATATCG 57.205 39.130 0.00 0.00 46.39 2.92
3157 3554 7.805071 GCATATCGGCTAATTTATTGCCATATC 59.195 37.037 0.00 0.00 46.39 1.63
3158 3555 7.503566 AGCATATCGGCTAATTTATTGCCATAT 59.496 33.333 0.00 0.00 46.39 1.78
3159 3556 6.828273 AGCATATCGGCTAATTTATTGCCATA 59.172 34.615 0.00 0.00 46.39 2.74
3160 3557 5.653769 AGCATATCGGCTAATTTATTGCCAT 59.346 36.000 0.00 0.00 46.39 4.40
3161 3558 5.009631 AGCATATCGGCTAATTTATTGCCA 58.990 37.500 0.00 0.00 46.39 4.92
3162 3559 5.123820 TCAGCATATCGGCTAATTTATTGCC 59.876 40.000 0.00 0.00 43.68 4.52
3163 3560 6.182039 TCAGCATATCGGCTAATTTATTGC 57.818 37.500 0.00 0.00 43.68 3.56
3164 3561 9.317936 TCTATCAGCATATCGGCTAATTTATTG 57.682 33.333 0.00 0.00 43.68 1.90
3165 3562 9.319143 GTCTATCAGCATATCGGCTAATTTATT 57.681 33.333 0.00 0.00 43.68 1.40
3166 3563 8.700051 AGTCTATCAGCATATCGGCTAATTTAT 58.300 33.333 0.00 0.00 43.68 1.40
3167 3564 7.976175 CAGTCTATCAGCATATCGGCTAATTTA 59.024 37.037 0.00 0.00 43.68 1.40
3168 3565 6.815641 CAGTCTATCAGCATATCGGCTAATTT 59.184 38.462 0.00 0.00 43.68 1.82
3169 3566 6.336566 CAGTCTATCAGCATATCGGCTAATT 58.663 40.000 0.00 0.00 43.68 1.40
3170 3567 5.163468 CCAGTCTATCAGCATATCGGCTAAT 60.163 44.000 0.00 0.00 43.68 1.73
3171 3568 4.158579 CCAGTCTATCAGCATATCGGCTAA 59.841 45.833 0.00 0.00 43.68 3.09
3172 3569 3.696548 CCAGTCTATCAGCATATCGGCTA 59.303 47.826 0.00 0.00 43.68 3.93
3174 3571 2.232452 ACCAGTCTATCAGCATATCGGC 59.768 50.000 0.00 0.00 0.00 5.54
3175 3572 4.021981 TCAACCAGTCTATCAGCATATCGG 60.022 45.833 0.00 0.00 0.00 4.18
3176 3573 5.126396 TCAACCAGTCTATCAGCATATCG 57.874 43.478 0.00 0.00 0.00 2.92
3177 3574 7.976135 AAATCAACCAGTCTATCAGCATATC 57.024 36.000 0.00 0.00 0.00 1.63
3178 3575 7.880195 GGTAAATCAACCAGTCTATCAGCATAT 59.120 37.037 0.00 0.00 39.50 1.78
3179 3576 7.217200 GGTAAATCAACCAGTCTATCAGCATA 58.783 38.462 0.00 0.00 39.50 3.14
3180 3577 6.058183 GGTAAATCAACCAGTCTATCAGCAT 58.942 40.000 0.00 0.00 39.50 3.79
3181 3578 5.428253 GGTAAATCAACCAGTCTATCAGCA 58.572 41.667 0.00 0.00 39.50 4.41
3182 3579 4.816925 GGGTAAATCAACCAGTCTATCAGC 59.183 45.833 0.00 0.00 41.67 4.26
3183 3580 5.131142 AGGGGTAAATCAACCAGTCTATCAG 59.869 44.000 0.00 0.00 41.67 2.90
3184 3581 5.036916 AGGGGTAAATCAACCAGTCTATCA 58.963 41.667 0.00 0.00 41.67 2.15
3185 3582 5.632034 AGGGGTAAATCAACCAGTCTATC 57.368 43.478 0.00 0.00 41.67 2.08
3186 3583 7.349859 TGATAAGGGGTAAATCAACCAGTCTAT 59.650 37.037 0.00 0.00 41.67 1.98
3187 3584 6.674861 TGATAAGGGGTAAATCAACCAGTCTA 59.325 38.462 0.00 0.00 41.67 2.59
3188 3585 5.491078 TGATAAGGGGTAAATCAACCAGTCT 59.509 40.000 0.00 0.00 41.67 3.24
3189 3586 5.751586 TGATAAGGGGTAAATCAACCAGTC 58.248 41.667 0.00 0.00 41.67 3.51
3190 3587 5.789574 TGATAAGGGGTAAATCAACCAGT 57.210 39.130 0.00 0.00 41.67 4.00
3191 3588 5.536161 CCATGATAAGGGGTAAATCAACCAG 59.464 44.000 0.00 0.00 41.67 4.00
3192 3589 5.454062 CCATGATAAGGGGTAAATCAACCA 58.546 41.667 0.00 0.00 41.67 3.67
3193 3590 4.832823 CCCATGATAAGGGGTAAATCAACC 59.167 45.833 0.00 0.00 42.90 3.77
3205 3602 0.250467 CCGGCTGACCCATGATAAGG 60.250 60.000 0.00 0.00 0.00 2.69
3206 3603 0.469917 ACCGGCTGACCCATGATAAG 59.530 55.000 0.00 0.00 0.00 1.73
3207 3604 1.796017 TACCGGCTGACCCATGATAA 58.204 50.000 0.00 0.00 0.00 1.75
3208 3605 1.691976 CTTACCGGCTGACCCATGATA 59.308 52.381 0.00 0.00 0.00 2.15
3209 3606 0.469917 CTTACCGGCTGACCCATGAT 59.530 55.000 0.00 0.00 0.00 2.45
3210 3607 0.907704 ACTTACCGGCTGACCCATGA 60.908 55.000 0.00 0.00 0.00 3.07
3211 3608 0.035439 AACTTACCGGCTGACCCATG 60.035 55.000 0.00 0.00 0.00 3.66
3212 3609 0.696501 AAACTTACCGGCTGACCCAT 59.303 50.000 0.00 0.00 0.00 4.00
3213 3610 0.035739 GAAACTTACCGGCTGACCCA 59.964 55.000 0.00 0.00 0.00 4.51
3214 3611 0.675837 GGAAACTTACCGGCTGACCC 60.676 60.000 0.00 0.00 0.00 4.46
3215 3612 1.017701 CGGAAACTTACCGGCTGACC 61.018 60.000 0.00 0.00 45.65 4.02
3216 3613 2.452767 CGGAAACTTACCGGCTGAC 58.547 57.895 0.00 0.00 45.65 3.51
3223 3620 5.987953 GGATATCACTTACCGGAAACTTACC 59.012 44.000 9.46 0.00 0.00 2.85
3224 3621 5.987953 GGGATATCACTTACCGGAAACTTAC 59.012 44.000 9.46 0.00 0.00 2.34
3225 3622 5.070847 GGGGATATCACTTACCGGAAACTTA 59.929 44.000 9.46 0.00 0.00 2.24
3226 3623 4.141551 GGGGATATCACTTACCGGAAACTT 60.142 45.833 9.46 0.00 0.00 2.66
3227 3624 3.390311 GGGGATATCACTTACCGGAAACT 59.610 47.826 9.46 0.00 0.00 2.66
3228 3625 3.135167 TGGGGATATCACTTACCGGAAAC 59.865 47.826 9.46 0.00 0.00 2.78
3229 3626 3.386063 TGGGGATATCACTTACCGGAAA 58.614 45.455 9.46 0.00 0.00 3.13
3230 3627 3.049108 TGGGGATATCACTTACCGGAA 57.951 47.619 9.46 0.00 0.00 4.30
3231 3628 2.701951 GTTGGGGATATCACTTACCGGA 59.298 50.000 9.46 0.00 0.00 5.14
3232 3629 2.436542 TGTTGGGGATATCACTTACCGG 59.563 50.000 4.65 0.00 0.00 5.28
3233 3630 3.830744 TGTTGGGGATATCACTTACCG 57.169 47.619 4.65 0.00 0.00 4.02
3234 3631 4.278419 GCAATGTTGGGGATATCACTTACC 59.722 45.833 4.65 0.00 0.00 2.85
3235 3632 5.133221 AGCAATGTTGGGGATATCACTTAC 58.867 41.667 4.65 4.18 0.00 2.34
3236 3633 5.387113 AGCAATGTTGGGGATATCACTTA 57.613 39.130 4.65 0.00 0.00 2.24
3237 3634 4.255510 AGCAATGTTGGGGATATCACTT 57.744 40.909 4.65 0.00 0.00 3.16
3238 3635 3.959495 AGCAATGTTGGGGATATCACT 57.041 42.857 4.65 0.00 0.00 3.41
3239 3636 3.319122 GGAAGCAATGTTGGGGATATCAC 59.681 47.826 4.83 0.00 0.00 3.06
3240 3637 3.053019 TGGAAGCAATGTTGGGGATATCA 60.053 43.478 4.83 0.00 0.00 2.15
3241 3638 3.565307 TGGAAGCAATGTTGGGGATATC 58.435 45.455 0.00 0.00 0.00 1.63
3242 3639 3.686227 TGGAAGCAATGTTGGGGATAT 57.314 42.857 0.00 0.00 0.00 1.63
3243 3640 3.053019 TCATGGAAGCAATGTTGGGGATA 60.053 43.478 0.00 0.00 0.00 2.59
3244 3641 2.112998 CATGGAAGCAATGTTGGGGAT 58.887 47.619 0.00 0.00 0.00 3.85
3245 3642 1.076841 TCATGGAAGCAATGTTGGGGA 59.923 47.619 0.00 0.00 0.00 4.81
3246 3643 1.205417 GTCATGGAAGCAATGTTGGGG 59.795 52.381 0.00 0.00 0.00 4.96
3247 3644 1.894466 TGTCATGGAAGCAATGTTGGG 59.106 47.619 0.00 0.00 0.00 4.12
3248 3645 3.663995 TTGTCATGGAAGCAATGTTGG 57.336 42.857 0.00 0.00 0.00 3.77
3261 3658 2.422479 CCAGACTTGCTCCATTGTCATG 59.578 50.000 0.00 0.00 32.41 3.07
3262 3659 2.306805 TCCAGACTTGCTCCATTGTCAT 59.693 45.455 0.00 0.00 32.41 3.06
3263 3660 1.699083 TCCAGACTTGCTCCATTGTCA 59.301 47.619 0.00 0.00 32.41 3.58
3264 3661 2.079925 GTCCAGACTTGCTCCATTGTC 58.920 52.381 0.00 0.00 0.00 3.18
3265 3662 1.609061 CGTCCAGACTTGCTCCATTGT 60.609 52.381 0.00 0.00 0.00 2.71
3266 3663 1.081892 CGTCCAGACTTGCTCCATTG 58.918 55.000 0.00 0.00 0.00 2.82
3267 3664 0.036010 CCGTCCAGACTTGCTCCATT 60.036 55.000 0.00 0.00 0.00 3.16
3268 3665 1.599047 CCGTCCAGACTTGCTCCAT 59.401 57.895 0.00 0.00 0.00 3.41
3269 3666 3.059982 CCGTCCAGACTTGCTCCA 58.940 61.111 0.00 0.00 0.00 3.86
3270 3667 2.435059 GCCGTCCAGACTTGCTCC 60.435 66.667 0.00 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.