Multiple sequence alignment - TraesCS2B01G454500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G454500 chr2B 100.000 4224 0 0 1 4224 649474856 649479079 0.000000e+00 7801.0
1 TraesCS2B01G454500 chr2B 96.458 367 13 0 130 496 649447113 649446747 1.300000e-169 606.0
2 TraesCS2B01G454500 chr2B 95.070 284 13 1 129 411 583409714 583409997 3.000000e-121 446.0
3 TraesCS2B01G454500 chr2B 86.604 321 31 10 558 878 649465487 649465795 1.120000e-90 344.0
4 TraesCS2B01G454500 chr2B 80.992 121 5 6 899 1015 649465874 649465980 3.500000e-11 80.5
5 TraesCS2B01G454500 chr2D 91.129 1533 83 22 554 2064 543843222 543844723 0.000000e+00 2028.0
6 TraesCS2B01G454500 chr2D 89.333 1200 56 23 2211 3357 543844902 543846082 0.000000e+00 1441.0
7 TraesCS2B01G454500 chr2D 87.079 356 24 10 558 906 543839525 543839865 2.380000e-102 383.0
8 TraesCS2B01G454500 chr2D 86.723 354 30 9 558 906 543835361 543835702 1.110000e-100 377.0
9 TraesCS2B01G454500 chr2D 87.857 140 12 4 422 560 543835338 543835473 4.370000e-35 159.0
10 TraesCS2B01G454500 chr2A 87.925 1557 98 44 558 2079 686700348 686701849 0.000000e+00 1751.0
11 TraesCS2B01G454500 chr2A 87.417 1208 87 37 2195 3357 686702004 686703191 0.000000e+00 1328.0
12 TraesCS2B01G454500 chr2A 94.667 75 4 0 55 129 686700238 686700312 2.670000e-22 117.0
13 TraesCS2B01G454500 chr4A 92.102 861 38 9 3357 4188 67291506 67292365 0.000000e+00 1186.0
14 TraesCS2B01G454500 chr4B 85.884 843 82 21 3357 4184 52569636 52568816 0.000000e+00 863.0
15 TraesCS2B01G454500 chr4B 85.544 837 88 17 3357 4180 52570826 52570010 0.000000e+00 845.0
16 TraesCS2B01G454500 chr4B 94.792 288 15 0 126 413 79528888 79528601 2.320000e-122 449.0
17 TraesCS2B01G454500 chr4B 91.005 189 17 0 3357 3545 52569811 52569999 5.420000e-64 255.0
18 TraesCS2B01G454500 chr4B 91.176 170 15 0 4011 4180 52569808 52569639 9.130000e-57 231.0
19 TraesCS2B01G454500 chr4B 80.672 238 46 0 3358 3595 52568816 52569053 7.210000e-43 185.0
20 TraesCS2B01G454500 chr4B 84.444 180 26 2 3357 3535 109317108 109317286 4.340000e-40 176.0
21 TraesCS2B01G454500 chr7A 94.848 330 15 1 3709 4036 680392951 680393280 8.100000e-142 514.0
22 TraesCS2B01G454500 chr7A 94.554 202 11 0 3358 3559 680392615 680392816 3.170000e-81 313.0
23 TraesCS2B01G454500 chr7A 93.836 146 9 0 4039 4184 680393255 680393400 1.980000e-53 220.0
24 TraesCS2B01G454500 chr7A 83.422 187 26 5 1504 1687 620750056 620749872 7.260000e-38 169.0
25 TraesCS2B01G454500 chr7A 83.516 182 22 7 3358 3535 12072997 12072820 3.380000e-36 163.0
26 TraesCS2B01G454500 chr7A 81.771 192 29 6 1512 1699 619576284 619576095 5.650000e-34 156.0
27 TraesCS2B01G454500 chr7A 82.418 182 28 3 1512 1691 619633660 619633481 5.650000e-34 156.0
28 TraesCS2B01G454500 chr7A 82.682 179 27 3 1512 1688 619907538 619907714 5.650000e-34 156.0
29 TraesCS2B01G454500 chr7A 92.632 95 6 1 3603 3696 680392811 680392905 7.370000e-28 135.0
30 TraesCS2B01G454500 chr3A 95.455 308 14 0 3874 4181 111839087 111839394 3.790000e-135 492.0
31 TraesCS2B01G454500 chr3A 95.238 189 9 0 3696 3884 111837897 111838085 2.470000e-77 300.0
32 TraesCS2B01G454500 chr3A 83.388 307 22 13 3357 3662 111837450 111837728 1.510000e-64 257.0
33 TraesCS2B01G454500 chr3B 95.053 283 14 0 129 411 17350571 17350289 3.000000e-121 446.0
34 TraesCS2B01G454500 chr7B 94.118 289 17 0 126 414 31801368 31801080 1.390000e-119 440.0
35 TraesCS2B01G454500 chr7B 93.793 290 17 1 126 414 709755329 709755040 6.490000e-118 435.0
36 TraesCS2B01G454500 chr7B 91.720 314 21 5 101 413 43690155 43690464 8.390000e-117 431.0
37 TraesCS2B01G454500 chr6B 94.077 287 17 0 127 413 149443087 149443373 1.800000e-118 436.0
38 TraesCS2B01G454500 chr1B 94.077 287 17 0 127 413 495803962 495804248 1.800000e-118 436.0
39 TraesCS2B01G454500 chr1B 82.178 202 24 9 3361 3556 106903927 106903732 3.380000e-36 163.0
40 TraesCS2B01G454500 chr7D 83.607 183 24 6 1512 1691 538332924 538332745 2.610000e-37 167.0
41 TraesCS2B01G454500 chr7D 82.474 194 29 5 1504 1694 539134170 539133979 9.400000e-37 165.0
42 TraesCS2B01G454500 chr7D 81.771 192 29 6 1512 1699 538140456 538140267 5.650000e-34 156.0
43 TraesCS2B01G454500 chr1A 81.218 197 35 2 3356 3551 515838842 515839037 1.570000e-34 158.0
44 TraesCS2B01G454500 chr5B 76.536 179 34 8 4010 4184 78741588 78741414 1.620000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G454500 chr2B 649474856 649479079 4223 False 7801.000000 7801 100.000000 1 4224 1 chr2B.!!$F2 4223
1 TraesCS2B01G454500 chr2D 543835338 543846082 10744 False 877.600000 2028 88.424200 422 3357 5 chr2D.!!$F1 2935
2 TraesCS2B01G454500 chr2A 686700238 686703191 2953 False 1065.333333 1751 90.003000 55 3357 3 chr2A.!!$F1 3302
3 TraesCS2B01G454500 chr4A 67291506 67292365 859 False 1186.000000 1186 92.102000 3357 4188 1 chr4A.!!$F1 831
4 TraesCS2B01G454500 chr4B 52568816 52570826 2010 True 646.333333 863 87.534667 3357 4184 3 chr4B.!!$R2 827
5 TraesCS2B01G454500 chr4B 52568816 52569999 1183 False 220.000000 255 85.838500 3357 3595 2 chr4B.!!$F2 238
6 TraesCS2B01G454500 chr7A 680392615 680393400 785 False 295.500000 514 93.967500 3358 4184 4 chr7A.!!$F2 826
7 TraesCS2B01G454500 chr3A 111837450 111839394 1944 False 349.666667 492 91.360333 3357 4181 3 chr3A.!!$F1 824

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
647 4703 0.109735 GCTTAAACAGCGACCCTTGC 60.110 55.0 0.00 0.00 39.29 4.01 F
1484 9273 0.512518 TTTTCGTGCAGCTGACATCG 59.487 50.0 20.43 18.55 0.00 3.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1892 9687 0.161024 CGCGTTTGAAAGAGTCGTCC 59.839 55.0 0.00 0.0 0.0 4.79 R
3283 11219 0.316360 CCAACACAAACACCGTACGC 60.316 55.0 10.49 0.0 0.0 4.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.730970 CGTCTTATATTTTGGTAGAGAGTAGC 57.269 38.462 0.00 0.00 0.00 3.58
26 27 8.569641 CGTCTTATATTTTGGTAGAGAGTAGCT 58.430 37.037 0.00 0.00 0.00 3.32
27 28 9.685828 GTCTTATATTTTGGTAGAGAGTAGCTG 57.314 37.037 0.00 0.00 0.00 4.24
28 29 9.422681 TCTTATATTTTGGTAGAGAGTAGCTGT 57.577 33.333 0.00 0.00 0.00 4.40
29 30 9.685828 CTTATATTTTGGTAGAGAGTAGCTGTC 57.314 37.037 0.00 0.00 0.00 3.51
30 31 7.661536 ATATTTTGGTAGAGAGTAGCTGTCA 57.338 36.000 0.00 0.00 0.00 3.58
31 32 5.801531 TTTTGGTAGAGAGTAGCTGTCAA 57.198 39.130 0.00 0.00 0.00 3.18
32 33 5.801531 TTTGGTAGAGAGTAGCTGTCAAA 57.198 39.130 0.00 0.00 0.00 2.69
33 34 5.392767 TTGGTAGAGAGTAGCTGTCAAAG 57.607 43.478 0.00 0.00 0.00 2.77
34 35 4.408276 TGGTAGAGAGTAGCTGTCAAAGT 58.592 43.478 0.00 0.00 0.00 2.66
35 36 4.833380 TGGTAGAGAGTAGCTGTCAAAGTT 59.167 41.667 0.00 0.00 0.00 2.66
36 37 6.008331 TGGTAGAGAGTAGCTGTCAAAGTTA 58.992 40.000 0.00 0.00 0.00 2.24
37 38 6.151312 TGGTAGAGAGTAGCTGTCAAAGTTAG 59.849 42.308 0.00 0.00 0.00 2.34
38 39 6.374894 GGTAGAGAGTAGCTGTCAAAGTTAGA 59.625 42.308 0.00 0.00 0.00 2.10
39 40 6.262193 AGAGAGTAGCTGTCAAAGTTAGAC 57.738 41.667 0.00 0.00 36.55 2.59
40 41 5.049398 AGAGTAGCTGTCAAAGTTAGACG 57.951 43.478 0.00 0.00 38.83 4.18
41 42 4.519730 AGAGTAGCTGTCAAAGTTAGACGT 59.480 41.667 0.00 0.00 38.83 4.34
42 43 5.009811 AGAGTAGCTGTCAAAGTTAGACGTT 59.990 40.000 0.00 0.00 38.83 3.99
43 44 5.221130 AGTAGCTGTCAAAGTTAGACGTTC 58.779 41.667 0.00 0.00 38.83 3.95
44 45 4.054780 AGCTGTCAAAGTTAGACGTTCA 57.945 40.909 0.00 0.00 38.83 3.18
45 46 4.439057 AGCTGTCAAAGTTAGACGTTCAA 58.561 39.130 0.00 0.00 38.83 2.69
46 47 5.057149 AGCTGTCAAAGTTAGACGTTCAAT 58.943 37.500 0.00 0.00 38.83 2.57
47 48 6.220930 AGCTGTCAAAGTTAGACGTTCAATA 58.779 36.000 0.00 0.00 38.83 1.90
48 49 6.145696 AGCTGTCAAAGTTAGACGTTCAATAC 59.854 38.462 0.00 0.00 38.83 1.89
49 50 6.145696 GCTGTCAAAGTTAGACGTTCAATACT 59.854 38.462 0.00 0.00 38.83 2.12
50 51 7.619571 GCTGTCAAAGTTAGACGTTCAATACTC 60.620 40.741 0.00 0.00 38.83 2.59
51 52 6.361481 TGTCAAAGTTAGACGTTCAATACTCG 59.639 38.462 0.00 0.00 38.83 4.18
52 53 5.344128 TCAAAGTTAGACGTTCAATACTCGC 59.656 40.000 0.00 0.00 0.00 5.03
53 54 3.767278 AGTTAGACGTTCAATACTCGCC 58.233 45.455 0.00 0.00 0.00 5.54
63 64 2.832129 TCAATACTCGCCCAAGACTCTT 59.168 45.455 0.00 0.00 0.00 2.85
75 76 5.560724 CCCAAGACTCTTTCTATGTTCCAA 58.439 41.667 0.00 0.00 32.51 3.53
83 84 7.886338 ACTCTTTCTATGTTCCAAAATTGACC 58.114 34.615 0.00 0.00 0.00 4.02
119 120 4.870426 TGCGAACTGATGGAGTAAAAGATC 59.130 41.667 0.00 0.00 33.09 2.75
124 125 7.065085 CGAACTGATGGAGTAAAAGATCACATT 59.935 37.037 0.00 0.00 33.09 2.71
125 126 7.856145 ACTGATGGAGTAAAAGATCACATTC 57.144 36.000 0.00 0.00 30.86 2.67
126 127 7.628234 ACTGATGGAGTAAAAGATCACATTCT 58.372 34.615 0.00 0.00 30.86 2.40
127 128 8.762645 ACTGATGGAGTAAAAGATCACATTCTA 58.237 33.333 0.00 0.00 30.86 2.10
128 129 9.605275 CTGATGGAGTAAAAGATCACATTCTAA 57.395 33.333 0.00 0.00 0.00 2.10
129 130 9.605275 TGATGGAGTAAAAGATCACATTCTAAG 57.395 33.333 0.00 0.00 0.00 2.18
130 131 8.970859 ATGGAGTAAAAGATCACATTCTAAGG 57.029 34.615 0.00 0.00 0.00 2.69
131 132 6.823689 TGGAGTAAAAGATCACATTCTAAGGC 59.176 38.462 0.00 0.00 0.00 4.35
132 133 6.261158 GGAGTAAAAGATCACATTCTAAGGCC 59.739 42.308 0.00 0.00 0.00 5.19
133 134 6.122964 AGTAAAAGATCACATTCTAAGGCCC 58.877 40.000 0.00 0.00 0.00 5.80
134 135 4.870021 AAAGATCACATTCTAAGGCCCT 57.130 40.909 0.00 0.00 0.00 5.19
135 136 3.853355 AGATCACATTCTAAGGCCCTG 57.147 47.619 0.00 0.00 0.00 4.45
136 137 3.118531 AGATCACATTCTAAGGCCCTGT 58.881 45.455 0.00 0.00 0.00 4.00
137 138 3.525199 AGATCACATTCTAAGGCCCTGTT 59.475 43.478 0.00 0.00 0.00 3.16
138 139 3.806949 TCACATTCTAAGGCCCTGTTT 57.193 42.857 0.00 0.00 0.00 2.83
139 140 3.420893 TCACATTCTAAGGCCCTGTTTG 58.579 45.455 0.00 0.00 0.00 2.93
140 141 2.493278 CACATTCTAAGGCCCTGTTTGG 59.507 50.000 0.00 0.00 0.00 3.28
141 142 2.110011 ACATTCTAAGGCCCTGTTTGGT 59.890 45.455 0.00 0.00 0.00 3.67
142 143 3.165071 CATTCTAAGGCCCTGTTTGGTT 58.835 45.455 0.00 0.00 0.00 3.67
143 144 2.579410 TCTAAGGCCCTGTTTGGTTC 57.421 50.000 0.00 0.00 0.00 3.62
144 145 1.777878 TCTAAGGCCCTGTTTGGTTCA 59.222 47.619 0.00 0.00 0.00 3.18
145 146 2.378547 TCTAAGGCCCTGTTTGGTTCAT 59.621 45.455 0.00 0.00 0.00 2.57
146 147 2.990740 AAGGCCCTGTTTGGTTCATA 57.009 45.000 0.00 0.00 0.00 2.15
147 148 2.990740 AGGCCCTGTTTGGTTCATAA 57.009 45.000 0.00 0.00 0.00 1.90
148 149 2.807676 AGGCCCTGTTTGGTTCATAAG 58.192 47.619 0.00 0.00 0.00 1.73
149 150 2.110011 AGGCCCTGTTTGGTTCATAAGT 59.890 45.455 0.00 0.00 0.00 2.24
150 151 2.492088 GGCCCTGTTTGGTTCATAAGTC 59.508 50.000 0.00 0.00 0.00 3.01
151 152 2.492088 GCCCTGTTTGGTTCATAAGTCC 59.508 50.000 0.00 0.00 0.00 3.85
152 153 3.814316 GCCCTGTTTGGTTCATAAGTCCT 60.814 47.826 0.00 0.00 0.00 3.85
153 154 4.566907 GCCCTGTTTGGTTCATAAGTCCTA 60.567 45.833 0.00 0.00 0.00 2.94
154 155 5.186198 CCCTGTTTGGTTCATAAGTCCTAG 58.814 45.833 0.00 0.00 0.00 3.02
155 156 5.186198 CCTGTTTGGTTCATAAGTCCTAGG 58.814 45.833 0.82 0.82 0.00 3.02
156 157 5.045869 CCTGTTTGGTTCATAAGTCCTAGGA 60.046 44.000 7.62 7.62 0.00 2.94
157 158 5.801380 TGTTTGGTTCATAAGTCCTAGGAC 58.199 41.667 31.29 31.29 44.86 3.85
190 191 8.379457 AGTTTCAACTTATAAGTCACAAGTCC 57.621 34.615 18.28 3.21 38.57 3.85
191 192 7.444487 AGTTTCAACTTATAAGTCACAAGTCCC 59.556 37.037 18.28 2.03 38.57 4.46
192 193 6.681729 TCAACTTATAAGTCACAAGTCCCT 57.318 37.500 18.28 0.00 38.57 4.20
193 194 7.786046 TCAACTTATAAGTCACAAGTCCCTA 57.214 36.000 18.28 0.00 38.57 3.53
194 195 8.197592 TCAACTTATAAGTCACAAGTCCCTAA 57.802 34.615 18.28 0.00 38.57 2.69
195 196 8.653191 TCAACTTATAAGTCACAAGTCCCTAAA 58.347 33.333 18.28 0.00 38.57 1.85
196 197 9.280174 CAACTTATAAGTCACAAGTCCCTAAAA 57.720 33.333 18.28 0.00 38.57 1.52
197 198 9.856162 AACTTATAAGTCACAAGTCCCTAAAAA 57.144 29.630 18.28 0.00 38.57 1.94
198 199 9.503399 ACTTATAAGTCACAAGTCCCTAAAAAG 57.497 33.333 12.50 0.00 32.86 2.27
199 200 9.503399 CTTATAAGTCACAAGTCCCTAAAAAGT 57.497 33.333 4.18 0.00 0.00 2.66
200 201 7.981102 ATAAGTCACAAGTCCCTAAAAAGTC 57.019 36.000 0.00 0.00 0.00 3.01
201 202 4.715713 AGTCACAAGTCCCTAAAAAGTCC 58.284 43.478 0.00 0.00 0.00 3.85
202 203 3.819337 GTCACAAGTCCCTAAAAAGTCCC 59.181 47.826 0.00 0.00 0.00 4.46
203 204 3.720002 TCACAAGTCCCTAAAAAGTCCCT 59.280 43.478 0.00 0.00 0.00 4.20
204 205 4.909088 TCACAAGTCCCTAAAAAGTCCCTA 59.091 41.667 0.00 0.00 0.00 3.53
205 206 5.001874 CACAAGTCCCTAAAAAGTCCCTAC 58.998 45.833 0.00 0.00 0.00 3.18
206 207 4.042560 ACAAGTCCCTAAAAAGTCCCTACC 59.957 45.833 0.00 0.00 0.00 3.18
207 208 4.157668 AGTCCCTAAAAAGTCCCTACCT 57.842 45.455 0.00 0.00 0.00 3.08
208 209 3.844804 AGTCCCTAAAAAGTCCCTACCTG 59.155 47.826 0.00 0.00 0.00 4.00
209 210 3.586174 GTCCCTAAAAAGTCCCTACCTGT 59.414 47.826 0.00 0.00 0.00 4.00
210 211 4.042560 GTCCCTAAAAAGTCCCTACCTGTT 59.957 45.833 0.00 0.00 0.00 3.16
211 212 4.666431 TCCCTAAAAAGTCCCTACCTGTTT 59.334 41.667 0.00 0.00 0.00 2.83
212 213 4.765339 CCCTAAAAAGTCCCTACCTGTTTG 59.235 45.833 0.00 0.00 0.00 2.93
213 214 4.765339 CCTAAAAAGTCCCTACCTGTTTGG 59.235 45.833 0.00 0.00 42.93 3.28
224 225 2.938956 CCTGTTTGGTTCCTGAGACT 57.061 50.000 0.00 0.00 0.00 3.24
225 226 3.214696 CCTGTTTGGTTCCTGAGACTT 57.785 47.619 0.00 0.00 0.00 3.01
226 227 4.351874 CCTGTTTGGTTCCTGAGACTTA 57.648 45.455 0.00 0.00 0.00 2.24
227 228 4.911390 CCTGTTTGGTTCCTGAGACTTAT 58.089 43.478 0.00 0.00 0.00 1.73
228 229 6.049955 CCTGTTTGGTTCCTGAGACTTATA 57.950 41.667 0.00 0.00 0.00 0.98
229 230 6.472887 CCTGTTTGGTTCCTGAGACTTATAA 58.527 40.000 0.00 0.00 0.00 0.98
230 231 6.595716 CCTGTTTGGTTCCTGAGACTTATAAG 59.404 42.308 11.05 11.05 0.00 1.73
231 232 7.074653 TGTTTGGTTCCTGAGACTTATAAGT 57.925 36.000 18.05 18.05 43.16 2.24
254 255 9.448587 AAGTCCCTATAAGACCATATTACAACT 57.551 33.333 0.09 0.00 34.67 3.16
264 265 9.448587 AAGACCATATTACAACTATAAGTCCCT 57.551 33.333 0.00 0.00 0.00 4.20
273 274 7.852550 ACAACTATAAGTCCCTATAAGTCCC 57.147 40.000 0.00 0.00 0.00 4.46
274 275 7.602868 ACAACTATAAGTCCCTATAAGTCCCT 58.397 38.462 0.00 0.00 0.00 4.20
275 276 7.729431 ACAACTATAAGTCCCTATAAGTCCCTC 59.271 40.741 0.00 0.00 0.00 4.30
276 277 6.803017 ACTATAAGTCCCTATAAGTCCCTCC 58.197 44.000 0.00 0.00 0.00 4.30
277 278 5.970692 ATAAGTCCCTATAAGTCCCTCCT 57.029 43.478 0.00 0.00 0.00 3.69
278 279 4.645968 AAGTCCCTATAAGTCCCTCCTT 57.354 45.455 0.00 0.00 0.00 3.36
279 280 5.763239 AAGTCCCTATAAGTCCCTCCTTA 57.237 43.478 0.00 0.00 0.00 2.69
280 281 5.763239 AGTCCCTATAAGTCCCTCCTTAA 57.237 43.478 0.00 0.00 31.09 1.85
281 282 5.718039 AGTCCCTATAAGTCCCTCCTTAAG 58.282 45.833 0.00 0.00 31.09 1.85
282 283 5.439059 AGTCCCTATAAGTCCCTCCTTAAGA 59.561 44.000 3.36 0.00 31.09 2.10
283 284 6.067781 AGTCCCTATAAGTCCCTCCTTAAGAA 60.068 42.308 3.36 0.00 31.09 2.52
284 285 6.788456 GTCCCTATAAGTCCCTCCTTAAGAAT 59.212 42.308 3.36 0.00 31.09 2.40
285 286 7.017531 TCCCTATAAGTCCCTCCTTAAGAATC 58.982 42.308 3.36 0.00 31.09 2.52
286 287 7.020009 CCCTATAAGTCCCTCCTTAAGAATCT 58.980 42.308 3.36 0.00 31.09 2.40
287 288 7.514473 CCCTATAAGTCCCTCCTTAAGAATCTT 59.486 40.741 3.36 0.00 31.09 2.40
288 289 9.603189 CCTATAAGTCCCTCCTTAAGAATCTTA 57.397 37.037 3.36 0.00 31.09 2.10
293 294 8.393959 AGTCCCTCCTTAAGAATCTTATTTCA 57.606 34.615 3.36 0.00 0.00 2.69
294 295 9.008584 AGTCCCTCCTTAAGAATCTTATTTCAT 57.991 33.333 3.36 0.00 0.00 2.57
309 310 8.225603 TCTTATTTCATAAGTCTCAAATGCCC 57.774 34.615 3.93 0.00 42.21 5.36
310 311 7.833682 TCTTATTTCATAAGTCTCAAATGCCCA 59.166 33.333 3.93 0.00 42.21 5.36
311 312 5.643379 TTTCATAAGTCTCAAATGCCCAC 57.357 39.130 0.00 0.00 0.00 4.61
312 313 4.574674 TCATAAGTCTCAAATGCCCACT 57.425 40.909 0.00 0.00 0.00 4.00
313 314 4.922206 TCATAAGTCTCAAATGCCCACTT 58.078 39.130 0.00 0.00 0.00 3.16
314 315 5.324409 TCATAAGTCTCAAATGCCCACTTT 58.676 37.500 0.00 0.00 0.00 2.66
315 316 6.480763 TCATAAGTCTCAAATGCCCACTTTA 58.519 36.000 0.00 0.00 0.00 1.85
316 317 6.945435 TCATAAGTCTCAAATGCCCACTTTAA 59.055 34.615 0.00 0.00 0.00 1.52
317 318 5.712152 AAGTCTCAAATGCCCACTTTAAG 57.288 39.130 0.00 0.00 0.00 1.85
318 319 4.729868 AGTCTCAAATGCCCACTTTAAGT 58.270 39.130 0.00 0.00 0.00 2.24
319 320 4.762251 AGTCTCAAATGCCCACTTTAAGTC 59.238 41.667 0.00 0.00 0.00 3.01
320 321 4.079253 TCTCAAATGCCCACTTTAAGTCC 58.921 43.478 0.00 0.00 0.00 3.85
321 322 3.161866 TCAAATGCCCACTTTAAGTCCC 58.838 45.455 0.00 0.00 0.00 4.46
322 323 3.165071 CAAATGCCCACTTTAAGTCCCT 58.835 45.455 0.00 0.00 0.00 4.20
323 324 4.043561 TCAAATGCCCACTTTAAGTCCCTA 59.956 41.667 0.00 0.00 0.00 3.53
324 325 4.881157 AATGCCCACTTTAAGTCCCTAT 57.119 40.909 0.00 0.00 0.00 2.57
325 326 5.987019 AATGCCCACTTTAAGTCCCTATA 57.013 39.130 0.00 0.00 0.00 1.31
326 327 5.987019 ATGCCCACTTTAAGTCCCTATAA 57.013 39.130 0.00 0.00 0.00 0.98
327 328 5.367945 TGCCCACTTTAAGTCCCTATAAG 57.632 43.478 0.00 0.00 0.00 1.73
328 329 4.786454 TGCCCACTTTAAGTCCCTATAAGT 59.214 41.667 0.00 0.00 0.00 2.24
329 330 5.104652 TGCCCACTTTAAGTCCCTATAAGTC 60.105 44.000 0.00 0.00 0.00 3.01
330 331 5.130643 GCCCACTTTAAGTCCCTATAAGTCT 59.869 44.000 0.00 0.00 0.00 3.24
331 332 6.685873 GCCCACTTTAAGTCCCTATAAGTCTC 60.686 46.154 0.00 0.00 0.00 3.36
332 333 6.612049 CCCACTTTAAGTCCCTATAAGTCTCT 59.388 42.308 0.00 0.00 0.00 3.10
333 334 7.201929 CCCACTTTAAGTCCCTATAAGTCTCTC 60.202 44.444 0.00 0.00 0.00 3.20
334 335 7.201929 CCACTTTAAGTCCCTATAAGTCTCTCC 60.202 44.444 0.00 0.00 0.00 3.71
335 336 7.562088 CACTTTAAGTCCCTATAAGTCTCTCCT 59.438 40.741 0.00 0.00 0.00 3.69
336 337 7.562088 ACTTTAAGTCCCTATAAGTCTCTCCTG 59.438 40.741 0.00 0.00 0.00 3.86
337 338 3.839778 AGTCCCTATAAGTCTCTCCTGC 58.160 50.000 0.00 0.00 0.00 4.85
338 339 3.465588 AGTCCCTATAAGTCTCTCCTGCT 59.534 47.826 0.00 0.00 0.00 4.24
339 340 4.078863 AGTCCCTATAAGTCTCTCCTGCTT 60.079 45.833 0.00 0.00 0.00 3.91
340 341 4.038642 GTCCCTATAAGTCTCTCCTGCTTG 59.961 50.000 0.00 0.00 0.00 4.01
341 342 3.323403 CCCTATAAGTCTCTCCTGCTTGG 59.677 52.174 0.00 0.00 37.10 3.61
342 343 3.964031 CCTATAAGTCTCTCCTGCTTGGT 59.036 47.826 0.00 0.00 37.07 3.67
343 344 4.407296 CCTATAAGTCTCTCCTGCTTGGTT 59.593 45.833 0.00 0.00 37.07 3.67
344 345 4.917906 ATAAGTCTCTCCTGCTTGGTTT 57.082 40.909 0.00 0.00 37.07 3.27
345 346 6.098409 CCTATAAGTCTCTCCTGCTTGGTTTA 59.902 42.308 0.00 0.00 37.07 2.01
346 347 3.971245 AGTCTCTCCTGCTTGGTTTAG 57.029 47.619 0.00 0.00 37.07 1.85
347 348 3.511477 AGTCTCTCCTGCTTGGTTTAGA 58.489 45.455 0.00 0.00 37.07 2.10
348 349 4.100373 AGTCTCTCCTGCTTGGTTTAGAT 58.900 43.478 0.00 0.00 37.07 1.98
349 350 4.081198 AGTCTCTCCTGCTTGGTTTAGATG 60.081 45.833 0.00 0.00 37.07 2.90
350 351 3.198635 TCTCTCCTGCTTGGTTTAGATGG 59.801 47.826 0.00 0.00 37.07 3.51
351 352 2.239654 TCTCCTGCTTGGTTTAGATGGG 59.760 50.000 0.00 0.00 37.07 4.00
352 353 2.239654 CTCCTGCTTGGTTTAGATGGGA 59.760 50.000 0.00 0.00 37.07 4.37
353 354 2.026262 TCCTGCTTGGTTTAGATGGGAC 60.026 50.000 0.00 0.00 37.07 4.46
354 355 2.025887 CCTGCTTGGTTTAGATGGGACT 60.026 50.000 0.00 0.00 0.00 3.85
355 356 3.562176 CCTGCTTGGTTTAGATGGGACTT 60.562 47.826 0.00 0.00 0.00 3.01
356 357 4.324254 CCTGCTTGGTTTAGATGGGACTTA 60.324 45.833 0.00 0.00 0.00 2.24
357 358 5.440610 CTGCTTGGTTTAGATGGGACTTAT 58.559 41.667 0.00 0.00 0.00 1.73
358 359 6.409234 CCTGCTTGGTTTAGATGGGACTTATA 60.409 42.308 0.00 0.00 0.00 0.98
359 360 6.591935 TGCTTGGTTTAGATGGGACTTATAG 58.408 40.000 0.00 0.00 0.00 1.31
360 361 6.385759 TGCTTGGTTTAGATGGGACTTATAGA 59.614 38.462 0.00 0.00 0.00 1.98
361 362 7.092623 TGCTTGGTTTAGATGGGACTTATAGAA 60.093 37.037 0.00 0.00 0.00 2.10
362 363 7.773690 GCTTGGTTTAGATGGGACTTATAGAAA 59.226 37.037 0.00 0.00 0.00 2.52
363 364 9.110502 CTTGGTTTAGATGGGACTTATAGAAAC 57.889 37.037 0.00 0.00 0.00 2.78
364 365 8.388656 TGGTTTAGATGGGACTTATAGAAACT 57.611 34.615 0.00 0.00 0.00 2.66
365 366 8.832735 TGGTTTAGATGGGACTTATAGAAACTT 58.167 33.333 0.00 0.00 0.00 2.66
366 367 9.682465 GGTTTAGATGGGACTTATAGAAACTTT 57.318 33.333 0.00 0.00 0.00 2.66
391 392 9.676861 TTTTTAAGTCCCTAAGCTAATAAGTCC 57.323 33.333 0.00 0.00 0.00 3.85
392 393 5.890752 AAGTCCCTAAGCTAATAAGTCCC 57.109 43.478 0.00 0.00 0.00 4.46
393 394 5.159139 AGTCCCTAAGCTAATAAGTCCCT 57.841 43.478 0.00 0.00 0.00 4.20
394 395 5.149239 AGTCCCTAAGCTAATAAGTCCCTC 58.851 45.833 0.00 0.00 0.00 4.30
395 396 4.900054 GTCCCTAAGCTAATAAGTCCCTCA 59.100 45.833 0.00 0.00 0.00 3.86
396 397 5.365895 GTCCCTAAGCTAATAAGTCCCTCAA 59.634 44.000 0.00 0.00 0.00 3.02
397 398 5.968167 TCCCTAAGCTAATAAGTCCCTCAAA 59.032 40.000 0.00 0.00 0.00 2.69
398 399 6.445786 TCCCTAAGCTAATAAGTCCCTCAAAA 59.554 38.462 0.00 0.00 0.00 2.44
399 400 6.542735 CCCTAAGCTAATAAGTCCCTCAAAAC 59.457 42.308 0.00 0.00 0.00 2.43
400 401 7.110155 CCTAAGCTAATAAGTCCCTCAAAACA 58.890 38.462 0.00 0.00 0.00 2.83
401 402 7.610305 CCTAAGCTAATAAGTCCCTCAAAACAA 59.390 37.037 0.00 0.00 0.00 2.83
402 403 7.833285 AAGCTAATAAGTCCCTCAAAACAAA 57.167 32.000 0.00 0.00 0.00 2.83
403 404 7.215719 AGCTAATAAGTCCCTCAAAACAAAC 57.784 36.000 0.00 0.00 0.00 2.93
404 405 6.775629 AGCTAATAAGTCCCTCAAAACAAACA 59.224 34.615 0.00 0.00 0.00 2.83
405 406 6.861572 GCTAATAAGTCCCTCAAAACAAACAC 59.138 38.462 0.00 0.00 0.00 3.32
406 407 5.784578 ATAAGTCCCTCAAAACAAACACC 57.215 39.130 0.00 0.00 0.00 4.16
407 408 2.384828 AGTCCCTCAAAACAAACACCC 58.615 47.619 0.00 0.00 0.00 4.61
442 443 7.816640 TGCAAGAATTAAAAAGTACAGCCTAG 58.183 34.615 0.00 0.00 0.00 3.02
443 444 6.747739 GCAAGAATTAAAAAGTACAGCCTAGC 59.252 38.462 0.00 0.00 0.00 3.42
446 447 8.950208 AGAATTAAAAAGTACAGCCTAGCTAG 57.050 34.615 14.20 14.20 36.40 3.42
447 448 7.496263 AGAATTAAAAAGTACAGCCTAGCTAGC 59.504 37.037 15.74 6.62 36.40 3.42
448 449 4.828072 AAAAAGTACAGCCTAGCTAGCT 57.172 40.909 23.12 23.12 42.70 3.32
449 450 4.394439 AAAAGTACAGCCTAGCTAGCTC 57.606 45.455 23.26 7.22 38.95 4.09
455 456 1.118356 AGCCTAGCTAGCTCGCCATT 61.118 55.000 23.26 5.85 36.99 3.16
470 471 2.315925 CCATTAGGCGTGATGTCAGT 57.684 50.000 9.90 0.00 0.00 3.41
471 472 2.632377 CCATTAGGCGTGATGTCAGTT 58.368 47.619 9.90 0.00 0.00 3.16
506 507 0.834612 CCGGCCCTTCCTTACATGTA 59.165 55.000 0.08 0.08 0.00 2.29
507 508 1.420138 CCGGCCCTTCCTTACATGTAT 59.580 52.381 6.36 0.00 0.00 2.29
522 523 5.924475 ACATGTATAAGGAATAACAGCGC 57.076 39.130 0.00 0.00 0.00 5.92
524 525 3.735591 TGTATAAGGAATAACAGCGCCC 58.264 45.455 2.29 0.00 0.00 6.13
539 541 1.230324 CGCCCCTGCTCTAATTAAGC 58.770 55.000 10.77 10.77 40.26 3.09
590 4646 4.153117 GCGTGATGTCAGAAACTTCTCAAT 59.847 41.667 0.00 0.00 34.74 2.57
616 4672 4.160329 CTCCTGCCCTATCCTTACATGTA 58.840 47.826 0.08 0.08 0.00 2.29
617 4673 4.562767 TCCTGCCCTATCCTTACATGTAA 58.437 43.478 17.16 17.16 0.00 2.41
618 4674 5.162637 TCCTGCCCTATCCTTACATGTAAT 58.837 41.667 18.35 7.06 0.00 1.89
619 4675 6.327781 TCCTGCCCTATCCTTACATGTAATA 58.672 40.000 18.35 10.45 0.00 0.98
620 4676 6.212791 TCCTGCCCTATCCTTACATGTAATAC 59.787 42.308 18.35 3.77 0.00 1.89
621 4677 6.032956 TGCCCTATCCTTACATGTAATACG 57.967 41.667 18.35 7.47 0.00 3.06
622 4678 5.541101 TGCCCTATCCTTACATGTAATACGT 59.459 40.000 18.35 8.12 0.00 3.57
623 4679 5.867716 GCCCTATCCTTACATGTAATACGTG 59.132 44.000 18.35 10.80 40.80 4.49
625 4681 7.309377 GCCCTATCCTTACATGTAATACGTGTA 60.309 40.741 18.35 18.49 45.70 2.90
647 4703 0.109735 GCTTAAACAGCGACCCTTGC 60.110 55.000 0.00 0.00 39.29 4.01
648 4704 1.523758 CTTAAACAGCGACCCTTGCT 58.476 50.000 0.00 0.00 45.31 3.91
649 4705 1.464997 CTTAAACAGCGACCCTTGCTC 59.535 52.381 0.00 0.00 41.72 4.26
677 4733 3.340928 AGCATCCGTTGGTTAACCTAAC 58.659 45.455 24.78 22.43 37.94 2.34
730 4792 1.233019 GGATAGCCACGTAGCGACTA 58.767 55.000 0.00 0.00 38.01 2.59
734 4796 1.922570 AGCCACGTAGCGACTAAATG 58.077 50.000 0.00 0.00 38.01 2.32
798 8571 3.121030 CTCGAGCCGGCCAAGTTG 61.121 66.667 26.15 8.80 0.00 3.16
806 8579 3.660111 GGCCAAGTTGCGCGTTCT 61.660 61.111 8.43 0.48 0.00 3.01
807 8580 2.427410 GCCAAGTTGCGCGTTCTG 60.427 61.111 8.43 0.00 0.00 3.02
808 8581 2.892334 GCCAAGTTGCGCGTTCTGA 61.892 57.895 8.43 0.00 0.00 3.27
819 8592 2.324330 CGTTCTGATGCGCCAACCA 61.324 57.895 4.18 0.00 0.00 3.67
828 8601 2.644992 CGCCAACCAAACCAGAGC 59.355 61.111 0.00 0.00 0.00 4.09
888 8661 2.513666 CATGCACGGGTGGCGTAT 60.514 61.111 0.43 0.00 0.00 3.06
943 8717 2.656560 ATGCTCTCGTACAGTTCCAC 57.343 50.000 0.00 0.00 0.00 4.02
972 8746 3.851403 CGTGCAAACATACATAGCCAAAC 59.149 43.478 0.00 0.00 0.00 2.93
975 8750 4.279420 TGCAAACATACATAGCCAAACACA 59.721 37.500 0.00 0.00 0.00 3.72
980 8755 4.391830 ACATACATAGCCAAACACACGAAG 59.608 41.667 0.00 0.00 0.00 3.79
981 8756 2.151202 ACATAGCCAAACACACGAAGG 58.849 47.619 0.00 0.00 0.00 3.46
982 8757 1.135689 CATAGCCAAACACACGAAGGC 60.136 52.381 0.00 0.00 45.54 4.35
983 8758 3.432186 GCCAAACACACGAAGGCT 58.568 55.556 0.00 0.00 42.01 4.58
984 8759 1.282875 GCCAAACACACGAAGGCTC 59.717 57.895 0.00 0.00 42.01 4.70
1008 8783 5.052567 CGAACGTATAGAAAACATGTCGAGG 60.053 44.000 0.00 0.00 0.00 4.63
1333 9111 1.674817 CGTCTCGCCTAACCACCAATT 60.675 52.381 0.00 0.00 0.00 2.32
1338 9116 3.078837 TCGCCTAACCACCAATTCTTTC 58.921 45.455 0.00 0.00 0.00 2.62
1352 9130 6.438425 ACCAATTCTTTCCATGCATACTTCTT 59.562 34.615 0.00 0.00 0.00 2.52
1353 9131 6.976925 CCAATTCTTTCCATGCATACTTCTTC 59.023 38.462 0.00 0.00 0.00 2.87
1358 9136 2.092429 TCCATGCATACTTCTTCCCCAC 60.092 50.000 0.00 0.00 0.00 4.61
1364 9142 4.202461 TGCATACTTCTTCCCCACATATCC 60.202 45.833 0.00 0.00 0.00 2.59
1365 9143 4.202461 GCATACTTCTTCCCCACATATCCA 60.202 45.833 0.00 0.00 0.00 3.41
1366 9144 5.515534 GCATACTTCTTCCCCACATATCCAT 60.516 44.000 0.00 0.00 0.00 3.41
1369 9147 2.689658 TCTTCCCCACATATCCATCGT 58.310 47.619 0.00 0.00 0.00 3.73
1381 9159 2.022764 TCCATCGTTCATGCGTTGAT 57.977 45.000 5.64 0.00 34.58 2.57
1394 9172 1.898938 CGTTGATTGCATGCACGAAT 58.101 45.000 22.58 11.97 0.00 3.34
1395 9173 2.252747 CGTTGATTGCATGCACGAATT 58.747 42.857 22.58 2.71 0.00 2.17
1396 9174 2.277057 CGTTGATTGCATGCACGAATTC 59.723 45.455 22.58 12.62 0.00 2.17
1397 9175 2.565210 TGATTGCATGCACGAATTCC 57.435 45.000 22.58 5.12 0.00 3.01
1398 9176 2.093890 TGATTGCATGCACGAATTCCT 58.906 42.857 22.58 0.00 0.00 3.36
1400 9178 2.350899 TTGCATGCACGAATTCCTTG 57.649 45.000 22.58 0.00 0.00 3.61
1401 9179 0.527113 TGCATGCACGAATTCCTTGG 59.473 50.000 18.46 0.00 0.00 3.61
1402 9180 0.810648 GCATGCACGAATTCCTTGGA 59.189 50.000 14.21 0.00 0.00 3.53
1403 9181 1.202114 GCATGCACGAATTCCTTGGAA 59.798 47.619 14.21 4.43 0.00 3.53
1420 9202 6.019152 CCTTGGAAAATTTGATGTACGTACG 58.981 40.000 20.18 15.01 0.00 3.67
1421 9203 6.347888 CCTTGGAAAATTTGATGTACGTACGT 60.348 38.462 25.98 25.98 0.00 3.57
1422 9204 7.148606 CCTTGGAAAATTTGATGTACGTACGTA 60.149 37.037 23.60 23.60 0.00 3.57
1424 9206 7.677309 TGGAAAATTTGATGTACGTACGTATG 58.323 34.615 29.05 13.27 32.82 2.39
1426 9208 6.650239 AAATTTGATGTACGTACGTATGCA 57.350 33.333 29.05 22.89 32.82 3.96
1429 9211 4.295857 TGATGTACGTACGTATGCATGT 57.704 40.909 29.05 10.91 32.82 3.21
1430 9212 4.674475 TGATGTACGTACGTATGCATGTT 58.326 39.130 29.05 10.25 32.82 2.71
1434 9220 4.922103 TGTACGTACGTATGCATGTTTTGA 59.078 37.500 29.05 2.90 32.82 2.69
1466 9252 4.664150 TGATTGTGCATGCATGATGATT 57.336 36.364 30.64 10.98 33.31 2.57
1469 9255 5.522097 TGATTGTGCATGCATGATGATTTTC 59.478 36.000 30.64 15.92 33.31 2.29
1484 9273 0.512518 TTTTCGTGCAGCTGACATCG 59.487 50.000 20.43 18.55 0.00 3.84
1658 9447 3.069586 CAGAGGACTTCCACAACTACACA 59.930 47.826 0.00 0.00 38.89 3.72
1664 9453 4.389374 ACTTCCACAACTACACAATCCTG 58.611 43.478 0.00 0.00 0.00 3.86
1718 9507 3.443045 GTGTCCCCCATGCAAGCG 61.443 66.667 0.00 0.00 0.00 4.68
1790 9583 2.875080 ATGCGCTGTTTCTAACGTTC 57.125 45.000 9.73 0.00 0.00 3.95
1872 9665 2.602217 GCACATGAAGACCAAACACGAC 60.602 50.000 0.00 0.00 0.00 4.34
1879 9672 1.202533 AGACCAAACACGACAGGACAG 60.203 52.381 0.00 0.00 0.00 3.51
1951 9746 6.737254 ATATGACCGTTTAACTGAACTTGG 57.263 37.500 0.00 0.00 0.00 3.61
1984 9779 1.208293 TCACATACGCATGGGCTTACA 59.792 47.619 10.10 0.00 35.36 2.41
2010 9805 2.948315 CCAAGCTTTTCCTCCTCATAGC 59.052 50.000 0.00 0.00 0.00 2.97
2109 9967 1.408422 CTTCCTTTTTCCTTTGCGCG 58.592 50.000 0.00 0.00 0.00 6.86
2133 9991 3.754188 CTCTAAAGCAAGCAAGCGATT 57.246 42.857 0.00 0.00 40.15 3.34
2177 10035 7.503521 TTTCTTTTTGAAAAAGCAAACCAGT 57.496 28.000 22.08 0.00 41.23 4.00
2184 10042 5.650543 TGAAAAAGCAAACCAGTTTCTCTC 58.349 37.500 0.00 0.00 0.00 3.20
2185 10043 5.184864 TGAAAAAGCAAACCAGTTTCTCTCA 59.815 36.000 0.00 0.00 0.00 3.27
2186 10044 5.659440 AAAAGCAAACCAGTTTCTCTCAA 57.341 34.783 0.00 0.00 0.00 3.02
2187 10045 5.659440 AAAGCAAACCAGTTTCTCTCAAA 57.341 34.783 0.00 0.00 0.00 2.69
2188 10046 4.639135 AGCAAACCAGTTTCTCTCAAAC 57.361 40.909 0.00 0.00 0.00 2.93
2189 10047 4.016444 AGCAAACCAGTTTCTCTCAAACA 58.984 39.130 0.00 0.00 32.81 2.83
2190 10048 4.096984 AGCAAACCAGTTTCTCTCAAACAG 59.903 41.667 0.00 0.00 32.81 3.16
2191 10049 4.096382 GCAAACCAGTTTCTCTCAAACAGA 59.904 41.667 0.00 0.00 32.81 3.41
2192 10050 5.221126 GCAAACCAGTTTCTCTCAAACAGAT 60.221 40.000 0.00 0.00 32.81 2.90
2193 10051 6.433766 CAAACCAGTTTCTCTCAAACAGATC 58.566 40.000 0.00 0.00 32.81 2.75
2205 10068 5.525012 TCTCAAACAGATCATAAAGCGATGG 59.475 40.000 0.00 0.00 0.00 3.51
2209 10072 6.515272 AACAGATCATAAAGCGATGGTTTT 57.485 33.333 0.00 0.00 34.94 2.43
2265 10128 6.128499 CGACTAATATGTTCCGTTTTGGTCAA 60.128 38.462 0.00 0.00 39.52 3.18
2282 10145 5.869579 TGGTCAAAAGATGAGAAAGCTAGT 58.130 37.500 0.00 0.00 39.19 2.57
2283 10146 7.004555 TGGTCAAAAGATGAGAAAGCTAGTA 57.995 36.000 0.00 0.00 39.19 1.82
2296 10162 9.998106 TGAGAAAGCTAGTAGTAAAATTCAAGT 57.002 29.630 0.00 0.00 0.00 3.16
2316 10182 8.175649 TCAAGTTTTTCGTCCAAATTAAACAC 57.824 30.769 0.00 0.00 0.00 3.32
2329 10195 9.660180 TCCAAATTAAACACCCATTTTTATAGC 57.340 29.630 0.00 0.00 0.00 2.97
2342 10208 6.152661 CCATTTTTATAGCAACCTTCCACTGA 59.847 38.462 0.00 0.00 0.00 3.41
2343 10209 6.817765 TTTTTATAGCAACCTTCCACTGAG 57.182 37.500 0.00 0.00 0.00 3.35
2344 10210 5.499004 TTTATAGCAACCTTCCACTGAGT 57.501 39.130 0.00 0.00 0.00 3.41
2345 10211 6.614694 TTTATAGCAACCTTCCACTGAGTA 57.385 37.500 0.00 0.00 0.00 2.59
2346 10212 4.744795 ATAGCAACCTTCCACTGAGTAG 57.255 45.455 0.00 0.00 0.00 2.57
2347 10213 1.002544 AGCAACCTTCCACTGAGTAGC 59.997 52.381 0.00 0.00 0.00 3.58
2348 10214 1.270839 GCAACCTTCCACTGAGTAGCA 60.271 52.381 0.00 0.00 0.00 3.49
2481 10392 2.113774 CTGTCCCAACCAGCTGCA 59.886 61.111 8.66 0.00 0.00 4.41
2483 10394 2.985847 GTCCCAACCAGCTGCACC 60.986 66.667 8.66 0.00 0.00 5.01
2574 10485 4.276431 CGTCAACTTAGCCCCTAAACAAAA 59.724 41.667 0.00 0.00 0.00 2.44
2683 10597 8.638685 AATCAAAATCTCGGCAAATTCAATAG 57.361 30.769 0.00 0.00 0.00 1.73
2684 10598 7.156876 TCAAAATCTCGGCAAATTCAATAGT 57.843 32.000 0.00 0.00 0.00 2.12
2685 10599 8.275015 TCAAAATCTCGGCAAATTCAATAGTA 57.725 30.769 0.00 0.00 0.00 1.82
2713 10627 1.604593 AGTTGGCCCATCACTGCAC 60.605 57.895 0.00 0.00 0.00 4.57
2714 10628 1.604593 GTTGGCCCATCACTGCACT 60.605 57.895 0.00 0.00 0.00 4.40
2715 10629 1.604308 TTGGCCCATCACTGCACTG 60.604 57.895 0.00 0.00 0.00 3.66
2716 10630 3.446570 GGCCCATCACTGCACTGC 61.447 66.667 0.00 0.00 0.00 4.40
2718 10632 3.807538 CCCATCACTGCACTGCGC 61.808 66.667 0.00 0.00 42.89 6.09
2720 10634 4.156622 CATCACTGCACTGCGCCG 62.157 66.667 4.18 0.00 41.33 6.46
2721 10635 4.377708 ATCACTGCACTGCGCCGA 62.378 61.111 4.18 0.00 41.33 5.54
2724 10638 3.680786 ACTGCACTGCGCCGAGTA 61.681 61.111 4.18 0.00 41.33 2.59
2756 10681 0.602106 AATGCATCGGATCTCCTGCG 60.602 55.000 0.00 0.00 39.31 5.18
2757 10682 2.356793 GCATCGGATCTCCTGCGG 60.357 66.667 0.00 0.00 39.47 5.69
2759 10684 2.839632 ATCGGATCTCCTGCGGCA 60.840 61.111 1.29 1.29 39.47 5.69
2760 10685 2.212811 ATCGGATCTCCTGCGGCAT 61.213 57.895 1.75 0.00 39.47 4.40
2761 10686 2.164865 ATCGGATCTCCTGCGGCATC 62.165 60.000 1.75 0.00 39.47 3.91
2762 10687 2.865598 CGGATCTCCTGCGGCATCT 61.866 63.158 1.75 0.00 34.67 2.90
2763 10688 1.527433 CGGATCTCCTGCGGCATCTA 61.527 60.000 1.75 0.00 34.67 1.98
2765 10690 1.606737 GGATCTCCTGCGGCATCTAAC 60.607 57.143 1.75 0.00 0.00 2.34
2766 10691 1.069204 GATCTCCTGCGGCATCTAACA 59.931 52.381 1.75 0.00 0.00 2.41
2767 10692 0.461548 TCTCCTGCGGCATCTAACAG 59.538 55.000 1.75 0.00 0.00 3.16
2768 10693 1.153369 TCCTGCGGCATCTAACAGC 60.153 57.895 1.75 0.00 0.00 4.40
2770 10695 1.156645 CCTGCGGCATCTAACAGCTC 61.157 60.000 1.75 0.00 0.00 4.09
2818 10743 1.668294 CAGCTTCTCTGTGGACGGT 59.332 57.895 0.00 0.00 38.02 4.83
2824 10749 3.157949 TCTGTGGACGGTGTGCCA 61.158 61.111 0.00 0.00 34.09 4.92
2854 10779 2.807895 CGGAACCACGACGCGAAT 60.808 61.111 15.93 0.00 35.47 3.34
2871 10796 3.659089 ATGGCGTGCCGTACCTGAC 62.659 63.158 3.18 0.00 39.42 3.51
2896 10821 4.505217 GCGATGAAGGTGCACGCG 62.505 66.667 11.45 3.53 39.90 6.01
2914 10839 2.764128 ACCATCTGGGACGGCGAT 60.764 61.111 16.62 0.00 41.15 4.58
3175 11100 2.979649 GACGACCCCTGGAACCTC 59.020 66.667 0.00 0.00 0.00 3.85
3203 11128 2.261361 CCGAGTGCGACATGGACA 59.739 61.111 0.00 0.00 42.22 4.02
3204 11129 1.807165 CCGAGTGCGACATGGACAG 60.807 63.158 0.00 0.00 42.22 3.51
3205 11130 2.447887 CGAGTGCGACATGGACAGC 61.448 63.158 0.00 0.00 42.22 4.40
3214 11145 2.685017 ATGGACAGCCTCGCCTCA 60.685 61.111 0.00 0.00 34.31 3.86
3225 11156 2.004808 CTCGCCTCAGCCGTGTGATA 62.005 60.000 0.00 0.00 34.57 2.15
3248 11182 1.227176 GGTTCCGTCGGCCATACTC 60.227 63.158 6.34 0.00 0.00 2.59
3252 11186 2.717044 CCGTCGGCCATACTCACCA 61.717 63.158 2.24 0.00 0.00 4.17
3255 11189 0.178068 GTCGGCCATACTCACCACAT 59.822 55.000 2.24 0.00 0.00 3.21
3271 11205 1.694403 CATACGTGTCGTCGTGTGC 59.306 57.895 0.00 0.00 43.25 4.57
3283 11219 1.665916 CGTGTGCCAGACAGACAGG 60.666 63.158 0.00 0.00 42.62 4.00
3314 11251 0.105964 TGTGTTGGTGCTTCTAGCGT 59.894 50.000 0.00 0.00 46.26 5.07
3315 11252 0.790814 GTGTTGGTGCTTCTAGCGTC 59.209 55.000 0.00 0.00 46.26 5.19
3316 11253 0.679505 TGTTGGTGCTTCTAGCGTCT 59.320 50.000 0.00 0.00 46.26 4.18
3317 11254 1.890489 TGTTGGTGCTTCTAGCGTCTA 59.110 47.619 0.00 0.00 46.26 2.59
3318 11255 2.094700 TGTTGGTGCTTCTAGCGTCTAG 60.095 50.000 7.36 7.36 46.26 2.43
3319 11256 0.456221 TGGTGCTTCTAGCGTCTAGC 59.544 55.000 8.48 0.00 46.26 3.42
3383 11321 6.723298 TTTTTGTCACAAAGGACCATACAT 57.277 33.333 2.58 0.00 36.97 2.29
3404 11342 9.979578 ATACATGCTTTTGTATTGACAGAAAAA 57.020 25.926 0.00 0.00 39.24 1.94
3619 11627 3.807368 GCCTATCCCTATGGCGGT 58.193 61.111 0.00 0.00 37.11 5.68
3669 11787 5.163237 TGGCGCTAATTCCTACTTTCCTATT 60.163 40.000 7.64 0.00 0.00 1.73
3751 11902 8.467598 ACAGTAAATACTAGTATGTGTGTGGAG 58.532 37.037 16.11 3.91 34.13 3.86
3781 11932 1.981256 ACGAAGGAACCAACATGCTT 58.019 45.000 0.00 0.00 0.00 3.91
3978 14346 1.721664 CCTATCCCGTTGCGAGTCGA 61.722 60.000 18.61 0.00 0.00 4.20
3985 14353 2.506217 TTGCGAGTCGATGCGTCC 60.506 61.111 18.61 0.00 0.00 4.79
3988 14356 2.328289 CGAGTCGATGCGTCCGAT 59.672 61.111 6.73 0.00 38.38 4.18
4085 14453 0.820891 CACTTGTTGGCTGCCAGACT 60.821 55.000 22.17 5.18 33.81 3.24
4094 14462 4.349503 TGCCAGACTTGCCGCCAT 62.350 61.111 0.00 0.00 0.00 4.40
4219 14589 9.861138 CGTAGCGTATATAATACAGGAGATAAC 57.139 37.037 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.569641 AGCTACTCTCTACCAAAATATAAGACG 58.430 37.037 0.00 0.00 0.00 4.18
2 3 9.422681 ACAGCTACTCTCTACCAAAATATAAGA 57.577 33.333 0.00 0.00 0.00 2.10
3 4 9.685828 GACAGCTACTCTCTACCAAAATATAAG 57.314 37.037 0.00 0.00 0.00 1.73
5 6 8.762481 TGACAGCTACTCTCTACCAAAATATA 57.238 34.615 0.00 0.00 0.00 0.86
6 7 7.661536 TGACAGCTACTCTCTACCAAAATAT 57.338 36.000 0.00 0.00 0.00 1.28
7 8 7.476540 TTGACAGCTACTCTCTACCAAAATA 57.523 36.000 0.00 0.00 0.00 1.40
8 9 6.360370 TTGACAGCTACTCTCTACCAAAAT 57.640 37.500 0.00 0.00 0.00 1.82
9 10 5.801531 TTGACAGCTACTCTCTACCAAAA 57.198 39.130 0.00 0.00 0.00 2.44
10 11 5.304614 ACTTTGACAGCTACTCTCTACCAAA 59.695 40.000 0.00 0.00 0.00 3.28
11 12 4.833380 ACTTTGACAGCTACTCTCTACCAA 59.167 41.667 0.00 0.00 0.00 3.67
12 13 4.408276 ACTTTGACAGCTACTCTCTACCA 58.592 43.478 0.00 0.00 0.00 3.25
13 14 5.394224 AACTTTGACAGCTACTCTCTACC 57.606 43.478 0.00 0.00 0.00 3.18
14 15 7.245604 GTCTAACTTTGACAGCTACTCTCTAC 58.754 42.308 0.00 0.00 34.80 2.59
15 16 6.092396 CGTCTAACTTTGACAGCTACTCTCTA 59.908 42.308 4.57 0.00 34.37 2.43
16 17 5.106475 CGTCTAACTTTGACAGCTACTCTCT 60.106 44.000 4.57 0.00 34.37 3.10
17 18 5.090083 CGTCTAACTTTGACAGCTACTCTC 58.910 45.833 4.57 0.00 34.37 3.20
18 19 4.519730 ACGTCTAACTTTGACAGCTACTCT 59.480 41.667 4.57 0.00 34.37 3.24
19 20 4.796369 ACGTCTAACTTTGACAGCTACTC 58.204 43.478 4.57 0.00 34.37 2.59
20 21 4.850347 ACGTCTAACTTTGACAGCTACT 57.150 40.909 4.57 0.00 34.37 2.57
21 22 4.980434 TGAACGTCTAACTTTGACAGCTAC 59.020 41.667 0.00 0.00 34.37 3.58
22 23 5.190992 TGAACGTCTAACTTTGACAGCTA 57.809 39.130 0.00 0.00 34.37 3.32
23 24 4.054780 TGAACGTCTAACTTTGACAGCT 57.945 40.909 0.00 0.00 34.37 4.24
24 25 4.789095 TTGAACGTCTAACTTTGACAGC 57.211 40.909 0.00 0.00 34.37 4.40
25 26 7.409449 CGAGTATTGAACGTCTAACTTTGACAG 60.409 40.741 0.00 0.77 34.37 3.51
26 27 6.361481 CGAGTATTGAACGTCTAACTTTGACA 59.639 38.462 0.00 0.00 34.37 3.58
27 28 6.666918 GCGAGTATTGAACGTCTAACTTTGAC 60.667 42.308 0.00 0.00 0.00 3.18
28 29 5.344128 GCGAGTATTGAACGTCTAACTTTGA 59.656 40.000 0.00 0.00 0.00 2.69
29 30 5.444218 GGCGAGTATTGAACGTCTAACTTTG 60.444 44.000 0.00 0.00 0.00 2.77
30 31 4.624452 GGCGAGTATTGAACGTCTAACTTT 59.376 41.667 0.00 0.00 0.00 2.66
31 32 4.171754 GGCGAGTATTGAACGTCTAACTT 58.828 43.478 0.00 0.00 0.00 2.66
32 33 3.428589 GGGCGAGTATTGAACGTCTAACT 60.429 47.826 0.00 0.00 0.00 2.24
33 34 2.856557 GGGCGAGTATTGAACGTCTAAC 59.143 50.000 0.00 0.00 0.00 2.34
34 35 2.492881 TGGGCGAGTATTGAACGTCTAA 59.507 45.455 0.00 0.00 0.00 2.10
35 36 2.093890 TGGGCGAGTATTGAACGTCTA 58.906 47.619 0.00 0.00 0.00 2.59
36 37 0.892755 TGGGCGAGTATTGAACGTCT 59.107 50.000 0.00 0.00 0.00 4.18
37 38 1.659098 CTTGGGCGAGTATTGAACGTC 59.341 52.381 0.00 0.00 0.00 4.34
38 39 1.274167 TCTTGGGCGAGTATTGAACGT 59.726 47.619 0.00 0.00 0.00 3.99
39 40 1.659098 GTCTTGGGCGAGTATTGAACG 59.341 52.381 0.00 0.00 0.00 3.95
40 41 2.930682 GAGTCTTGGGCGAGTATTGAAC 59.069 50.000 0.00 0.00 0.00 3.18
41 42 2.832129 AGAGTCTTGGGCGAGTATTGAA 59.168 45.455 0.00 0.00 0.00 2.69
42 43 2.457598 AGAGTCTTGGGCGAGTATTGA 58.542 47.619 0.00 0.00 0.00 2.57
43 44 2.969628 AGAGTCTTGGGCGAGTATTG 57.030 50.000 0.00 0.00 0.00 1.90
44 45 3.515901 AGAAAGAGTCTTGGGCGAGTATT 59.484 43.478 6.06 0.00 29.66 1.89
45 46 3.100671 AGAAAGAGTCTTGGGCGAGTAT 58.899 45.455 6.06 0.00 29.66 2.12
46 47 2.526432 AGAAAGAGTCTTGGGCGAGTA 58.474 47.619 6.06 0.00 29.66 2.59
47 48 1.343069 AGAAAGAGTCTTGGGCGAGT 58.657 50.000 6.06 0.00 29.66 4.18
48 49 3.118956 ACATAGAAAGAGTCTTGGGCGAG 60.119 47.826 6.06 0.00 37.84 5.03
49 50 2.832129 ACATAGAAAGAGTCTTGGGCGA 59.168 45.455 6.06 0.00 37.84 5.54
50 51 3.252974 ACATAGAAAGAGTCTTGGGCG 57.747 47.619 6.06 0.00 37.84 6.13
51 52 3.942115 GGAACATAGAAAGAGTCTTGGGC 59.058 47.826 6.06 0.00 37.84 5.36
52 53 5.165961 TGGAACATAGAAAGAGTCTTGGG 57.834 43.478 6.06 0.00 37.84 4.12
53 54 7.510549 TTTTGGAACATAGAAAGAGTCTTGG 57.489 36.000 6.06 0.00 39.30 3.61
63 64 8.837099 ATATGGGTCAATTTTGGAACATAGAA 57.163 30.769 0.00 0.00 39.30 2.10
75 76 8.458573 TCGCAAGTAAATATATGGGTCAATTT 57.541 30.769 0.00 0.00 39.48 1.82
83 84 7.387673 TCCATCAGTTCGCAAGTAAATATATGG 59.612 37.037 0.00 0.00 39.48 2.74
119 120 2.493278 CCAAACAGGGCCTTAGAATGTG 59.507 50.000 1.32 0.00 0.00 3.21
124 125 1.777878 TGAACCAAACAGGGCCTTAGA 59.222 47.619 1.32 0.00 43.89 2.10
125 126 2.286365 TGAACCAAACAGGGCCTTAG 57.714 50.000 1.32 0.00 43.89 2.18
126 127 2.990740 ATGAACCAAACAGGGCCTTA 57.009 45.000 1.32 0.00 43.89 2.69
127 128 2.990740 TATGAACCAAACAGGGCCTT 57.009 45.000 1.32 0.00 43.89 4.35
128 129 2.110011 ACTTATGAACCAAACAGGGCCT 59.890 45.455 0.00 0.00 43.89 5.19
129 130 2.492088 GACTTATGAACCAAACAGGGCC 59.508 50.000 0.00 0.00 43.89 5.80
130 131 2.492088 GGACTTATGAACCAAACAGGGC 59.508 50.000 0.00 0.00 43.89 5.19
131 132 4.034285 AGGACTTATGAACCAAACAGGG 57.966 45.455 0.00 0.00 43.89 4.45
132 133 5.045869 TCCTAGGACTTATGAACCAAACAGG 60.046 44.000 7.62 0.00 45.67 4.00
133 134 5.875359 GTCCTAGGACTTATGAACCAAACAG 59.125 44.000 31.12 0.00 41.57 3.16
134 135 5.801380 GTCCTAGGACTTATGAACCAAACA 58.199 41.667 31.12 0.00 41.57 2.83
164 165 9.485206 GGACTTGTGACTTATAAGTTGAAACTA 57.515 33.333 18.96 10.98 40.34 2.24
165 166 7.444487 GGGACTTGTGACTTATAAGTTGAAACT 59.556 37.037 18.96 2.11 40.34 2.66
166 167 7.444487 AGGGACTTGTGACTTATAAGTTGAAAC 59.556 37.037 18.96 14.54 40.34 2.78
167 168 7.514721 AGGGACTTGTGACTTATAAGTTGAAA 58.485 34.615 18.96 12.03 40.34 2.69
168 169 7.074653 AGGGACTTGTGACTTATAAGTTGAA 57.925 36.000 18.96 10.96 40.34 2.69
169 170 6.681729 AGGGACTTGTGACTTATAAGTTGA 57.318 37.500 18.96 6.85 40.34 3.18
170 171 8.842358 TTTAGGGACTTGTGACTTATAAGTTG 57.158 34.615 18.96 9.81 40.34 3.16
171 172 9.856162 TTTTTAGGGACTTGTGACTTATAAGTT 57.144 29.630 18.96 2.29 40.34 2.66
172 173 9.503399 CTTTTTAGGGACTTGTGACTTATAAGT 57.497 33.333 18.05 18.05 42.57 2.24
173 174 9.503399 ACTTTTTAGGGACTTGTGACTTATAAG 57.497 33.333 11.05 11.05 41.75 1.73
174 175 9.498176 GACTTTTTAGGGACTTGTGACTTATAA 57.502 33.333 0.00 0.00 41.75 0.98
175 176 8.098912 GGACTTTTTAGGGACTTGTGACTTATA 58.901 37.037 0.00 0.00 41.75 0.98
176 177 6.940867 GGACTTTTTAGGGACTTGTGACTTAT 59.059 38.462 0.00 0.00 41.75 1.73
177 178 6.293698 GGACTTTTTAGGGACTTGTGACTTA 58.706 40.000 0.00 0.00 41.75 2.24
178 179 5.131067 GGACTTTTTAGGGACTTGTGACTT 58.869 41.667 0.00 0.00 41.75 3.01
179 180 4.445879 GGGACTTTTTAGGGACTTGTGACT 60.446 45.833 0.00 0.00 41.75 3.41
180 181 3.819337 GGGACTTTTTAGGGACTTGTGAC 59.181 47.826 0.00 0.00 41.75 3.67
181 182 3.720002 AGGGACTTTTTAGGGACTTGTGA 59.280 43.478 0.00 0.00 34.75 3.58
182 183 4.100279 AGGGACTTTTTAGGGACTTGTG 57.900 45.455 0.00 0.00 34.75 3.33
183 184 4.042560 GGTAGGGACTTTTTAGGGACTTGT 59.957 45.833 0.00 0.00 39.49 3.16
184 185 4.288887 AGGTAGGGACTTTTTAGGGACTTG 59.711 45.833 0.00 0.00 39.49 3.16
185 186 4.288887 CAGGTAGGGACTTTTTAGGGACTT 59.711 45.833 0.00 0.00 39.49 3.01
186 187 3.844804 CAGGTAGGGACTTTTTAGGGACT 59.155 47.826 0.00 0.00 41.75 3.85
187 188 3.586174 ACAGGTAGGGACTTTTTAGGGAC 59.414 47.826 0.00 0.00 41.75 4.46
188 189 3.878086 ACAGGTAGGGACTTTTTAGGGA 58.122 45.455 0.00 0.00 41.75 4.20
189 190 4.652679 AACAGGTAGGGACTTTTTAGGG 57.347 45.455 0.00 0.00 41.75 3.53
190 191 4.765339 CCAAACAGGTAGGGACTTTTTAGG 59.235 45.833 0.00 0.00 41.75 2.69
191 192 5.959618 CCAAACAGGTAGGGACTTTTTAG 57.040 43.478 0.00 0.00 41.75 1.85
205 206 2.938956 AGTCTCAGGAACCAAACAGG 57.061 50.000 0.00 0.00 45.67 4.00
206 207 7.162082 ACTTATAAGTCTCAGGAACCAAACAG 58.838 38.462 12.50 0.00 32.86 3.16
207 208 7.074653 ACTTATAAGTCTCAGGAACCAAACA 57.925 36.000 12.50 0.00 32.86 2.83
228 229 9.448587 AGTTGTAATATGGTCTTATAGGGACTT 57.551 33.333 7.52 0.00 41.75 3.01
238 239 9.448587 AGGGACTTATAGTTGTAATATGGTCTT 57.551 33.333 0.00 0.00 27.25 3.01
247 248 9.372189 GGGACTTATAGGGACTTATAGTTGTAA 57.628 37.037 0.00 0.00 41.75 2.41
248 249 8.740512 AGGGACTTATAGGGACTTATAGTTGTA 58.259 37.037 0.00 0.00 34.75 2.41
249 250 7.602868 AGGGACTTATAGGGACTTATAGTTGT 58.397 38.462 0.00 0.00 34.75 3.32
250 251 7.178805 GGAGGGACTTATAGGGACTTATAGTTG 59.821 44.444 0.00 0.00 41.55 3.16
251 252 7.076566 AGGAGGGACTTATAGGGACTTATAGTT 59.923 40.741 0.00 0.00 41.55 2.24
252 253 6.571180 AGGAGGGACTTATAGGGACTTATAGT 59.429 42.308 0.00 0.00 41.55 2.12
253 254 7.046891 AGGAGGGACTTATAGGGACTTATAG 57.953 44.000 0.00 0.00 41.55 1.31
254 255 7.431936 AAGGAGGGACTTATAGGGACTTATA 57.568 40.000 0.00 0.00 41.55 0.98
255 256 5.970692 AGGAGGGACTTATAGGGACTTAT 57.029 43.478 0.00 0.00 41.55 1.73
256 257 5.763239 AAGGAGGGACTTATAGGGACTTA 57.237 43.478 0.00 0.00 41.55 2.24
257 258 4.645968 AAGGAGGGACTTATAGGGACTT 57.354 45.455 0.00 0.00 41.55 3.01
258 259 5.439059 TCTTAAGGAGGGACTTATAGGGACT 59.561 44.000 1.85 0.00 41.55 3.85
259 260 5.713807 TCTTAAGGAGGGACTTATAGGGAC 58.286 45.833 1.85 0.00 41.55 4.46
260 261 6.365609 TTCTTAAGGAGGGACTTATAGGGA 57.634 41.667 1.85 0.00 41.55 4.20
261 262 7.020009 AGATTCTTAAGGAGGGACTTATAGGG 58.980 42.308 1.85 0.00 41.55 3.53
262 263 8.499288 AAGATTCTTAAGGAGGGACTTATAGG 57.501 38.462 1.85 0.00 41.55 2.57
267 268 8.836735 TGAAATAAGATTCTTAAGGAGGGACTT 58.163 33.333 10.07 2.26 41.55 3.01
286 287 7.615365 AGTGGGCATTTGAGACTTATGAAATAA 59.385 33.333 0.00 0.00 36.20 1.40
287 288 7.118723 AGTGGGCATTTGAGACTTATGAAATA 58.881 34.615 0.00 0.00 0.00 1.40
288 289 5.954150 AGTGGGCATTTGAGACTTATGAAAT 59.046 36.000 0.00 0.00 0.00 2.17
289 290 5.324409 AGTGGGCATTTGAGACTTATGAAA 58.676 37.500 0.00 0.00 0.00 2.69
290 291 4.922206 AGTGGGCATTTGAGACTTATGAA 58.078 39.130 0.00 0.00 0.00 2.57
291 292 4.574674 AGTGGGCATTTGAGACTTATGA 57.425 40.909 0.00 0.00 0.00 2.15
292 293 5.649782 AAAGTGGGCATTTGAGACTTATG 57.350 39.130 0.00 0.00 0.00 1.90
293 294 6.948309 ACTTAAAGTGGGCATTTGAGACTTAT 59.052 34.615 7.52 0.00 30.26 1.73
294 295 6.303839 ACTTAAAGTGGGCATTTGAGACTTA 58.696 36.000 7.52 0.00 30.26 2.24
295 296 5.140454 ACTTAAAGTGGGCATTTGAGACTT 58.860 37.500 7.52 0.00 30.26 3.01
296 297 4.729868 ACTTAAAGTGGGCATTTGAGACT 58.270 39.130 7.52 0.00 30.26 3.24
297 298 4.082733 GGACTTAAAGTGGGCATTTGAGAC 60.083 45.833 7.52 2.89 30.26 3.36
298 299 4.079253 GGACTTAAAGTGGGCATTTGAGA 58.921 43.478 7.52 0.00 30.26 3.27
299 300 3.193479 GGGACTTAAAGTGGGCATTTGAG 59.807 47.826 0.00 0.00 31.53 3.02
300 301 3.161866 GGGACTTAAAGTGGGCATTTGA 58.838 45.455 0.00 0.00 0.00 2.69
301 302 3.165071 AGGGACTTAAAGTGGGCATTTG 58.835 45.455 0.00 0.00 27.25 2.32
302 303 3.542969 AGGGACTTAAAGTGGGCATTT 57.457 42.857 0.00 0.00 27.25 2.32
303 304 4.881157 ATAGGGACTTAAAGTGGGCATT 57.119 40.909 0.00 0.00 41.75 3.56
304 305 5.432060 ACTTATAGGGACTTAAAGTGGGCAT 59.568 40.000 0.00 0.00 39.58 4.40
305 306 4.786454 ACTTATAGGGACTTAAAGTGGGCA 59.214 41.667 0.00 0.00 39.58 5.36
306 307 5.130643 AGACTTATAGGGACTTAAAGTGGGC 59.869 44.000 0.00 0.00 40.60 5.36
307 308 6.612049 AGAGACTTATAGGGACTTAAAGTGGG 59.388 42.308 0.00 0.00 40.60 4.61
308 309 7.201929 GGAGAGACTTATAGGGACTTAAAGTGG 60.202 44.444 0.00 0.00 40.60 4.00
309 310 7.562088 AGGAGAGACTTATAGGGACTTAAAGTG 59.438 40.741 0.00 0.00 40.60 3.16
310 311 7.562088 CAGGAGAGACTTATAGGGACTTAAAGT 59.438 40.741 0.00 0.00 42.31 2.66
311 312 7.470841 GCAGGAGAGACTTATAGGGACTTAAAG 60.471 44.444 0.00 0.00 41.75 1.85
312 313 6.324254 GCAGGAGAGACTTATAGGGACTTAAA 59.676 42.308 0.00 0.00 41.75 1.52
313 314 5.834204 GCAGGAGAGACTTATAGGGACTTAA 59.166 44.000 0.00 0.00 41.75 1.85
314 315 5.134679 AGCAGGAGAGACTTATAGGGACTTA 59.865 44.000 0.00 0.00 41.75 2.24
315 316 4.078863 AGCAGGAGAGACTTATAGGGACTT 60.079 45.833 0.00 0.00 41.75 3.01
316 317 3.465588 AGCAGGAGAGACTTATAGGGACT 59.534 47.826 0.00 0.00 46.37 3.85
317 318 3.839778 AGCAGGAGAGACTTATAGGGAC 58.160 50.000 0.00 0.00 0.00 4.46
318 319 4.219115 CAAGCAGGAGAGACTTATAGGGA 58.781 47.826 0.00 0.00 0.00 4.20
319 320 3.323403 CCAAGCAGGAGAGACTTATAGGG 59.677 52.174 0.00 0.00 41.22 3.53
320 321 3.964031 ACCAAGCAGGAGAGACTTATAGG 59.036 47.826 1.83 0.00 41.22 2.57
321 322 5.606348 AACCAAGCAGGAGAGACTTATAG 57.394 43.478 1.83 0.00 41.22 1.31
322 323 6.895756 TCTAAACCAAGCAGGAGAGACTTATA 59.104 38.462 1.83 0.00 41.22 0.98
323 324 4.917906 AAACCAAGCAGGAGAGACTTAT 57.082 40.909 1.83 0.00 41.22 1.73
324 325 5.084519 TCTAAACCAAGCAGGAGAGACTTA 58.915 41.667 1.83 0.00 41.22 2.24
325 326 3.904339 TCTAAACCAAGCAGGAGAGACTT 59.096 43.478 1.83 0.00 41.22 3.01
326 327 3.511477 TCTAAACCAAGCAGGAGAGACT 58.489 45.455 1.83 0.00 41.22 3.24
327 328 3.963428 TCTAAACCAAGCAGGAGAGAC 57.037 47.619 1.83 0.00 41.22 3.36
328 329 3.198635 CCATCTAAACCAAGCAGGAGAGA 59.801 47.826 1.83 2.41 41.22 3.10
329 330 3.539604 CCATCTAAACCAAGCAGGAGAG 58.460 50.000 1.83 0.00 41.22 3.20
330 331 2.239654 CCCATCTAAACCAAGCAGGAGA 59.760 50.000 1.83 0.00 41.22 3.71
331 332 2.239654 TCCCATCTAAACCAAGCAGGAG 59.760 50.000 1.83 0.00 41.22 3.69
332 333 2.026262 GTCCCATCTAAACCAAGCAGGA 60.026 50.000 1.83 0.00 41.22 3.86
333 334 2.025887 AGTCCCATCTAAACCAAGCAGG 60.026 50.000 0.00 0.00 45.67 4.85
334 335 3.356529 AGTCCCATCTAAACCAAGCAG 57.643 47.619 0.00 0.00 0.00 4.24
335 336 3.806949 AAGTCCCATCTAAACCAAGCA 57.193 42.857 0.00 0.00 0.00 3.91
336 337 6.827727 TCTATAAGTCCCATCTAAACCAAGC 58.172 40.000 0.00 0.00 0.00 4.01
337 338 9.110502 GTTTCTATAAGTCCCATCTAAACCAAG 57.889 37.037 0.00 0.00 0.00 3.61
338 339 8.832735 AGTTTCTATAAGTCCCATCTAAACCAA 58.167 33.333 0.00 0.00 0.00 3.67
339 340 8.388656 AGTTTCTATAAGTCCCATCTAAACCA 57.611 34.615 0.00 0.00 0.00 3.67
340 341 9.682465 AAAGTTTCTATAAGTCCCATCTAAACC 57.318 33.333 0.00 0.00 0.00 3.27
365 366 9.676861 GGACTTATTAGCTTAGGGACTTAAAAA 57.323 33.333 0.00 0.00 41.75 1.94
366 367 8.270030 GGGACTTATTAGCTTAGGGACTTAAAA 58.730 37.037 0.00 0.00 41.75 1.52
367 368 7.626487 AGGGACTTATTAGCTTAGGGACTTAAA 59.374 37.037 0.00 0.00 34.75 1.52
368 369 7.137567 AGGGACTTATTAGCTTAGGGACTTAA 58.862 38.462 0.00 0.00 34.75 1.85
369 370 6.690569 AGGGACTTATTAGCTTAGGGACTTA 58.309 40.000 0.00 0.00 34.75 2.24
370 371 5.539842 AGGGACTTATTAGCTTAGGGACTT 58.460 41.667 0.00 0.00 34.75 3.01
371 372 5.149239 GAGGGACTTATTAGCTTAGGGACT 58.851 45.833 0.00 0.00 41.55 3.85
372 373 4.900054 TGAGGGACTTATTAGCTTAGGGAC 59.100 45.833 0.00 0.00 41.55 4.46
373 374 5.152306 TGAGGGACTTATTAGCTTAGGGA 57.848 43.478 0.00 0.00 41.55 4.20
374 375 5.888982 TTGAGGGACTTATTAGCTTAGGG 57.111 43.478 0.00 0.00 41.55 3.53
375 376 7.110155 TGTTTTGAGGGACTTATTAGCTTAGG 58.890 38.462 0.00 0.00 41.55 2.69
376 377 8.561738 TTGTTTTGAGGGACTTATTAGCTTAG 57.438 34.615 0.00 0.00 41.55 2.18
377 378 8.789762 GTTTGTTTTGAGGGACTTATTAGCTTA 58.210 33.333 0.00 0.00 41.55 3.09
378 379 7.286775 TGTTTGTTTTGAGGGACTTATTAGCTT 59.713 33.333 0.00 0.00 41.55 3.74
379 380 6.775629 TGTTTGTTTTGAGGGACTTATTAGCT 59.224 34.615 0.00 0.00 41.55 3.32
380 381 6.861572 GTGTTTGTTTTGAGGGACTTATTAGC 59.138 38.462 0.00 0.00 41.55 3.09
381 382 7.368059 GGTGTTTGTTTTGAGGGACTTATTAG 58.632 38.462 0.00 0.00 41.55 1.73
382 383 6.265876 GGGTGTTTGTTTTGAGGGACTTATTA 59.734 38.462 0.00 0.00 41.55 0.98
383 384 5.069914 GGGTGTTTGTTTTGAGGGACTTATT 59.930 40.000 0.00 0.00 41.55 1.40
384 385 4.587262 GGGTGTTTGTTTTGAGGGACTTAT 59.413 41.667 0.00 0.00 41.55 1.73
385 386 3.955551 GGGTGTTTGTTTTGAGGGACTTA 59.044 43.478 0.00 0.00 41.55 2.24
386 387 2.764010 GGGTGTTTGTTTTGAGGGACTT 59.236 45.455 0.00 0.00 41.55 3.01
388 389 2.361119 GAGGGTGTTTGTTTTGAGGGAC 59.639 50.000 0.00 0.00 0.00 4.46
389 390 2.243736 AGAGGGTGTTTGTTTTGAGGGA 59.756 45.455 0.00 0.00 0.00 4.20
390 391 2.666317 AGAGGGTGTTTGTTTTGAGGG 58.334 47.619 0.00 0.00 0.00 4.30
391 392 4.887655 AGTTAGAGGGTGTTTGTTTTGAGG 59.112 41.667 0.00 0.00 0.00 3.86
392 393 6.318900 AGAAGTTAGAGGGTGTTTGTTTTGAG 59.681 38.462 0.00 0.00 0.00 3.02
393 394 6.094881 CAGAAGTTAGAGGGTGTTTGTTTTGA 59.905 38.462 0.00 0.00 0.00 2.69
394 395 6.265577 CAGAAGTTAGAGGGTGTTTGTTTTG 58.734 40.000 0.00 0.00 0.00 2.44
395 396 5.163550 GCAGAAGTTAGAGGGTGTTTGTTTT 60.164 40.000 0.00 0.00 0.00 2.43
396 397 4.338400 GCAGAAGTTAGAGGGTGTTTGTTT 59.662 41.667 0.00 0.00 0.00 2.83
397 398 3.883489 GCAGAAGTTAGAGGGTGTTTGTT 59.117 43.478 0.00 0.00 0.00 2.83
398 399 3.118038 TGCAGAAGTTAGAGGGTGTTTGT 60.118 43.478 0.00 0.00 0.00 2.83
399 400 3.476552 TGCAGAAGTTAGAGGGTGTTTG 58.523 45.455 0.00 0.00 0.00 2.93
400 401 3.857157 TGCAGAAGTTAGAGGGTGTTT 57.143 42.857 0.00 0.00 0.00 2.83
401 402 3.391296 TCTTGCAGAAGTTAGAGGGTGTT 59.609 43.478 0.00 0.00 0.00 3.32
402 403 2.972713 TCTTGCAGAAGTTAGAGGGTGT 59.027 45.455 0.00 0.00 0.00 4.16
403 404 3.685139 TCTTGCAGAAGTTAGAGGGTG 57.315 47.619 0.00 0.00 0.00 4.61
404 405 4.917906 ATTCTTGCAGAAGTTAGAGGGT 57.082 40.909 5.15 0.00 37.69 4.34
405 406 7.687941 TTTAATTCTTGCAGAAGTTAGAGGG 57.312 36.000 4.62 0.00 37.69 4.30
406 407 9.617975 CTTTTTAATTCTTGCAGAAGTTAGAGG 57.382 33.333 4.62 0.00 37.69 3.69
438 439 1.203523 CCTAATGGCGAGCTAGCTAGG 59.796 57.143 23.94 17.92 37.29 3.02
455 456 3.762288 AGAAGTAACTGACATCACGCCTA 59.238 43.478 0.00 0.00 0.00 3.93
462 463 6.459923 AGGACTTTGAGAAGTAACTGACATC 58.540 40.000 0.00 0.00 45.88 3.06
467 468 4.238514 CGGAGGACTTTGAGAAGTAACTG 58.761 47.826 0.00 0.00 45.88 3.16
506 507 1.774856 AGGGGCGCTGTTATTCCTTAT 59.225 47.619 7.64 0.00 0.00 1.73
507 508 1.134220 CAGGGGCGCTGTTATTCCTTA 60.134 52.381 22.22 0.00 0.00 2.69
522 523 2.439507 TGGAGCTTAATTAGAGCAGGGG 59.560 50.000 16.68 0.00 42.56 4.79
524 525 4.125703 CAGTGGAGCTTAATTAGAGCAGG 58.874 47.826 16.68 2.63 42.56 4.85
539 541 4.163458 TGGCTATTAGGTTTACCAGTGGAG 59.837 45.833 18.40 0.00 38.89 3.86
590 4646 0.343372 AAGGATAGGGCAGGAGGACA 59.657 55.000 0.00 0.00 0.00 4.02
629 4685 1.464997 GAGCAAGGGTCGCTGTTTAAG 59.535 52.381 0.00 0.00 40.63 1.85
632 4688 0.685097 TAGAGCAAGGGTCGCTGTTT 59.315 50.000 0.00 0.00 40.63 2.83
647 4703 7.407337 GTTAACCAACGGATGCTTAATTAGAG 58.593 38.462 0.00 0.00 0.00 2.43
648 4704 6.316890 GGTTAACCAACGGATGCTTAATTAGA 59.683 38.462 20.12 0.00 35.34 2.10
649 4705 6.317893 AGGTTAACCAACGGATGCTTAATTAG 59.682 38.462 26.26 0.00 38.89 1.73
677 4733 4.212004 CGTGCATGTAGAGTAATCATTGGG 59.788 45.833 0.00 0.00 0.00 4.12
678 4734 4.811024 ACGTGCATGTAGAGTAATCATTGG 59.189 41.667 10.57 0.00 0.00 3.16
689 4751 5.358725 TCCATAGAACTTACGTGCATGTAGA 59.641 40.000 17.81 6.80 0.00 2.59
690 4752 5.588240 TCCATAGAACTTACGTGCATGTAG 58.412 41.667 17.81 14.25 0.00 2.74
691 4753 5.585820 TCCATAGAACTTACGTGCATGTA 57.414 39.130 14.85 14.85 0.00 2.29
692 4754 4.465632 TCCATAGAACTTACGTGCATGT 57.534 40.909 17.19 17.19 0.00 3.21
711 4773 1.233019 TAGTCGCTACGTGGCTATCC 58.767 55.000 22.04 6.60 0.00 2.59
714 4776 2.424601 ACATTTAGTCGCTACGTGGCTA 59.575 45.455 22.04 8.35 0.00 3.93
715 4777 1.203994 ACATTTAGTCGCTACGTGGCT 59.796 47.619 22.04 5.84 0.00 4.75
724 4786 1.355971 TTCGAGCCACATTTAGTCGC 58.644 50.000 0.00 0.00 34.23 5.19
730 4792 4.599047 TTTTTCCATTCGAGCCACATTT 57.401 36.364 0.00 0.00 0.00 2.32
801 8574 1.851021 TTGGTTGGCGCATCAGAACG 61.851 55.000 10.83 0.00 0.00 3.95
802 8575 0.313672 TTTGGTTGGCGCATCAGAAC 59.686 50.000 10.83 3.32 0.00 3.01
803 8576 0.313672 GTTTGGTTGGCGCATCAGAA 59.686 50.000 10.83 0.00 0.00 3.02
804 8577 1.523154 GGTTTGGTTGGCGCATCAGA 61.523 55.000 10.83 0.00 0.00 3.27
805 8578 1.080569 GGTTTGGTTGGCGCATCAG 60.081 57.895 10.83 0.00 0.00 2.90
806 8579 1.804396 CTGGTTTGGTTGGCGCATCA 61.804 55.000 10.83 0.00 0.00 3.07
807 8580 1.080569 CTGGTTTGGTTGGCGCATC 60.081 57.895 10.83 0.00 0.00 3.91
808 8581 1.526575 CTCTGGTTTGGTTGGCGCAT 61.527 55.000 10.83 0.00 0.00 4.73
819 8592 0.105964 TACGTGCACAGCTCTGGTTT 59.894 50.000 18.64 0.00 34.19 3.27
888 8661 0.843309 TGTCAGGCCTTCAAGTTGGA 59.157 50.000 0.00 0.00 0.00 3.53
930 8704 1.822990 GAGATGGGTGGAACTGTACGA 59.177 52.381 0.00 0.00 36.74 3.43
931 8705 1.469251 CGAGATGGGTGGAACTGTACG 60.469 57.143 0.00 0.00 36.74 3.67
943 8717 2.355197 TGTATGTTTGCACGAGATGGG 58.645 47.619 0.00 0.00 0.00 4.00
972 8746 0.386352 TACGTTCGAGCCTTCGTGTG 60.386 55.000 0.00 0.00 46.72 3.82
975 8750 2.283298 TCTATACGTTCGAGCCTTCGT 58.717 47.619 0.00 0.87 46.72 3.85
980 8755 4.565564 ACATGTTTTCTATACGTTCGAGCC 59.434 41.667 0.00 0.00 0.00 4.70
981 8756 5.552104 CGACATGTTTTCTATACGTTCGAGC 60.552 44.000 0.00 0.00 0.00 5.03
982 8757 5.735892 TCGACATGTTTTCTATACGTTCGAG 59.264 40.000 0.00 0.00 0.00 4.04
983 8758 5.630061 TCGACATGTTTTCTATACGTTCGA 58.370 37.500 0.00 0.00 0.00 3.71
984 8759 5.052567 CCTCGACATGTTTTCTATACGTTCG 60.053 44.000 0.00 0.00 0.00 3.95
985 8760 5.276254 GCCTCGACATGTTTTCTATACGTTC 60.276 44.000 0.00 0.00 0.00 3.95
986 8761 4.565564 GCCTCGACATGTTTTCTATACGTT 59.434 41.667 0.00 0.00 0.00 3.99
1008 8783 2.183555 GCCATTGCAAGCAGAGGC 59.816 61.111 19.22 19.22 39.31 4.70
1183 8961 1.002087 GGAGACGTTGTTGAGGGTGAT 59.998 52.381 0.00 0.00 0.00 3.06
1333 9111 4.526970 GGGAAGAAGTATGCATGGAAAGA 58.473 43.478 10.16 0.00 0.00 2.52
1338 9116 2.301346 GTGGGGAAGAAGTATGCATGG 58.699 52.381 10.16 0.00 0.00 3.66
1352 9130 2.403561 TGAACGATGGATATGTGGGGA 58.596 47.619 0.00 0.00 0.00 4.81
1353 9131 2.928801 TGAACGATGGATATGTGGGG 57.071 50.000 0.00 0.00 0.00 4.96
1358 9136 3.494251 TCAACGCATGAACGATGGATATG 59.506 43.478 0.00 0.00 36.59 1.78
1364 9142 1.841944 GCAATCAACGCATGAACGATG 59.158 47.619 0.00 0.00 42.54 3.84
1365 9143 1.468127 TGCAATCAACGCATGAACGAT 59.532 42.857 0.00 0.00 42.54 3.73
1366 9144 0.871057 TGCAATCAACGCATGAACGA 59.129 45.000 0.00 0.00 42.54 3.85
1381 9159 1.067706 CCAAGGAATTCGTGCATGCAA 60.068 47.619 24.58 7.64 0.00 4.08
1394 9172 6.642707 ACGTACATCAAATTTTCCAAGGAA 57.357 33.333 0.00 0.00 0.00 3.36
1395 9173 6.128499 CGTACGTACATCAAATTTTCCAAGGA 60.128 38.462 24.50 0.00 0.00 3.36
1396 9174 6.019152 CGTACGTACATCAAATTTTCCAAGG 58.981 40.000 24.50 0.00 0.00 3.61
1397 9175 6.595794 ACGTACGTACATCAAATTTTCCAAG 58.404 36.000 21.41 5.67 0.00 3.61
1398 9176 6.542574 ACGTACGTACATCAAATTTTCCAA 57.457 33.333 21.41 0.00 0.00 3.53
1400 9178 6.626095 GCATACGTACGTACATCAAATTTTCC 59.374 38.462 28.99 0.00 33.01 3.13
1401 9179 7.174746 TGCATACGTACGTACATCAAATTTTC 58.825 34.615 28.99 6.44 33.01 2.29
1402 9180 7.062906 TGCATACGTACGTACATCAAATTTT 57.937 32.000 28.99 7.60 33.01 1.82
1403 9181 6.650239 TGCATACGTACGTACATCAAATTT 57.350 33.333 28.99 8.35 33.01 1.82
1420 9202 4.549458 ACACAAGCTCAAAACATGCATAC 58.451 39.130 0.00 0.00 0.00 2.39
1421 9203 4.852134 ACACAAGCTCAAAACATGCATA 57.148 36.364 0.00 0.00 0.00 3.14
1422 9204 3.738830 ACACAAGCTCAAAACATGCAT 57.261 38.095 0.00 0.00 0.00 3.96
1424 9206 4.329528 TCAAAACACAAGCTCAAAACATGC 59.670 37.500 0.00 0.00 0.00 4.06
1426 9208 6.594937 ACAATCAAAACACAAGCTCAAAACAT 59.405 30.769 0.00 0.00 0.00 2.71
1429 9211 5.163874 GCACAATCAAAACACAAGCTCAAAA 60.164 36.000 0.00 0.00 0.00 2.44
1430 9212 4.329528 GCACAATCAAAACACAAGCTCAAA 59.670 37.500 0.00 0.00 0.00 2.69
1434 9220 3.523606 TGCACAATCAAAACACAAGCT 57.476 38.095 0.00 0.00 0.00 3.74
1466 9252 0.319469 TCGATGTCAGCTGCACGAAA 60.319 50.000 20.91 0.00 0.00 3.46
1469 9255 1.690283 CCTTCGATGTCAGCTGCACG 61.690 60.000 9.47 15.24 0.00 5.34
1658 9447 2.040412 GTTCAGAGGGTTCCACAGGATT 59.960 50.000 0.00 0.00 0.00 3.01
1664 9453 2.859165 TGATGTTCAGAGGGTTCCAC 57.141 50.000 0.00 0.00 0.00 4.02
1774 9567 3.000925 ACAACAGAACGTTAGAAACAGCG 59.999 43.478 0.00 0.00 35.52 5.18
1776 9569 5.518847 TGAGACAACAGAACGTTAGAAACAG 59.481 40.000 0.00 0.00 35.52 3.16
1790 9583 2.344950 CTAGCTTGGCTGAGACAACAG 58.655 52.381 0.00 0.00 40.10 3.16
1879 9672 1.017701 GTCGTCCCCGGACACAATTC 61.018 60.000 14.11 0.00 44.77 2.17
1889 9684 1.145803 GTTTGAAAGAGTCGTCCCCG 58.854 55.000 0.00 0.00 0.00 5.73
1892 9687 0.161024 CGCGTTTGAAAGAGTCGTCC 59.839 55.000 0.00 0.00 0.00 4.79
1951 9746 1.602377 GTATGTGATACTTTGGGCCGC 59.398 52.381 0.00 0.00 33.00 6.53
1961 9756 2.169832 AGCCCATGCGTATGTGATAC 57.830 50.000 12.66 0.00 44.33 2.24
1984 9779 1.203100 AGGAGGAAAAGCTTGGTGCAT 60.203 47.619 0.00 0.00 45.94 3.96
2079 9937 0.602905 AAAAGGAAGGACCGTGCGAG 60.603 55.000 0.00 0.00 44.74 5.03
2156 10014 7.584108 AGAAACTGGTTTGCTTTTTCAAAAAG 58.416 30.769 17.02 17.02 37.65 2.27
2166 10024 4.462483 TGTTTGAGAGAAACTGGTTTGCTT 59.538 37.500 3.30 0.00 32.11 3.91
2168 10026 4.096382 TCTGTTTGAGAGAAACTGGTTTGC 59.904 41.667 3.30 0.00 32.11 3.68
2177 10035 6.873605 TCGCTTTATGATCTGTTTGAGAGAAA 59.126 34.615 0.00 0.00 32.80 2.52
2184 10042 5.490139 ACCATCGCTTTATGATCTGTTTG 57.510 39.130 0.00 0.00 0.00 2.93
2185 10043 6.515272 AAACCATCGCTTTATGATCTGTTT 57.485 33.333 0.00 0.00 0.00 2.83
2186 10044 6.515272 AAAACCATCGCTTTATGATCTGTT 57.485 33.333 0.00 0.00 0.00 3.16
2187 10045 6.375455 AGAAAAACCATCGCTTTATGATCTGT 59.625 34.615 0.00 0.00 0.00 3.41
2188 10046 6.789262 AGAAAAACCATCGCTTTATGATCTG 58.211 36.000 0.00 0.00 0.00 2.90
2189 10047 6.599244 TGAGAAAAACCATCGCTTTATGATCT 59.401 34.615 0.00 0.00 0.00 2.75
2190 10048 6.785191 TGAGAAAAACCATCGCTTTATGATC 58.215 36.000 0.00 0.00 0.00 2.92
2191 10049 6.757897 TGAGAAAAACCATCGCTTTATGAT 57.242 33.333 0.00 0.00 0.00 2.45
2192 10050 6.567687 TTGAGAAAAACCATCGCTTTATGA 57.432 33.333 0.00 0.00 0.00 2.15
2193 10051 7.816945 ATTTGAGAAAAACCATCGCTTTATG 57.183 32.000 0.00 0.00 0.00 1.90
2283 10146 8.989653 TTTGGACGAAAAACTTGAATTTTACT 57.010 26.923 0.00 0.00 31.50 2.24
2296 10162 5.974108 TGGGTGTTTAATTTGGACGAAAAA 58.026 33.333 0.00 0.00 0.00 1.94
2316 10182 5.422012 AGTGGAAGGTTGCTATAAAAATGGG 59.578 40.000 0.00 0.00 0.00 4.00
2329 10195 2.839486 TGCTACTCAGTGGAAGGTTG 57.161 50.000 0.00 0.00 0.00 3.77
2342 10208 3.947834 AGTTGCTGTTCAAGTTTGCTACT 59.052 39.130 0.00 0.00 34.81 2.57
2343 10209 4.292977 AGTTGCTGTTCAAGTTTGCTAC 57.707 40.909 0.00 0.00 34.81 3.58
2344 10210 4.671377 CAAGTTGCTGTTCAAGTTTGCTA 58.329 39.130 0.00 0.00 43.79 3.49
2345 10211 3.514645 CAAGTTGCTGTTCAAGTTTGCT 58.485 40.909 0.00 0.00 43.79 3.91
2346 10212 2.029606 GCAAGTTGCTGTTCAAGTTTGC 59.970 45.455 20.71 9.47 43.79 3.68
2347 10213 3.912708 GCAAGTTGCTGTTCAAGTTTG 57.087 42.857 20.71 0.00 43.79 2.93
2406 10294 7.467267 GCGGCTAAACTAGAATGATTTGAATGA 60.467 37.037 0.00 0.00 0.00 2.57
2481 10392 4.020839 TCGATCCCTTCTTCGTTTAAAGGT 60.021 41.667 7.71 0.00 38.30 3.50
2483 10394 4.567159 CCTCGATCCCTTCTTCGTTTAAAG 59.433 45.833 0.00 0.00 36.74 1.85
2574 10485 4.560128 ACGATTATCGCATCATTAGCTGT 58.440 39.130 14.97 0.00 45.12 4.40
2683 10597 4.415783 CCAACTGGCCTTGGGTAC 57.584 61.111 14.69 0.00 37.62 3.34
2713 10627 1.330779 CGATCGATTACTCGGCGCAG 61.331 60.000 10.26 5.07 45.10 5.18
2714 10628 1.370051 CGATCGATTACTCGGCGCA 60.370 57.895 10.26 0.00 45.10 6.09
2715 10629 0.659417 TTCGATCGATTACTCGGCGC 60.659 55.000 20.18 0.00 45.10 6.53
2716 10630 1.965083 ATTCGATCGATTACTCGGCG 58.035 50.000 20.18 0.00 45.10 6.46
2718 10632 5.344933 TGCATTAATTCGATCGATTACTCGG 59.655 40.000 20.18 7.59 45.10 4.63
2720 10634 7.107380 CGATGCATTAATTCGATCGATTACTC 58.893 38.462 20.18 6.06 38.53 2.59
2721 10635 6.035005 CCGATGCATTAATTCGATCGATTACT 59.965 38.462 20.18 10.61 38.53 2.24
2722 10636 6.034577 TCCGATGCATTAATTCGATCGATTAC 59.965 38.462 20.18 8.49 38.53 1.89
2724 10638 4.929211 TCCGATGCATTAATTCGATCGATT 59.071 37.500 20.18 12.96 38.53 3.34
2824 10749 4.595538 TTCCGGAACACGCGCACT 62.596 61.111 14.35 0.00 42.52 4.40
2871 10796 2.515523 CCTTCATCGCCTGCCTGG 60.516 66.667 0.00 0.00 39.35 4.45
2896 10821 1.461091 TATCGCCGTCCCAGATGGTC 61.461 60.000 4.82 0.00 40.59 4.02
3214 11145 2.423577 GAACCAAACTATCACACGGCT 58.576 47.619 0.00 0.00 0.00 5.52
3220 11151 1.997606 CCGACGGAACCAAACTATCAC 59.002 52.381 8.64 0.00 0.00 3.06
3225 11156 2.281276 GGCCGACGGAACCAAACT 60.281 61.111 20.50 0.00 0.00 2.66
3252 11186 1.000233 GCACACGACGACACGTATGT 61.000 55.000 0.00 0.00 44.76 2.29
3255 11189 2.051076 GGCACACGACGACACGTA 60.051 61.111 0.00 0.00 44.76 3.57
3271 11205 1.154016 CGTACGCCTGTCTGTCTGG 60.154 63.158 0.52 0.00 38.06 3.86
3283 11219 0.316360 CCAACACAAACACCGTACGC 60.316 55.000 10.49 0.00 0.00 4.42
3320 11257 0.948678 GAGACGACCTAGCAGGCTAG 59.051 60.000 19.06 19.06 44.07 3.42
3619 11627 4.891992 ACTACAGCAGAAAAAGGAGCTA 57.108 40.909 0.00 0.00 35.19 3.32
3751 11902 3.113322 GGTTCCTTCGTTGCAAAGTTTC 58.887 45.455 12.18 0.00 0.00 2.78
3781 11932 2.426522 CCAAGTCTGAGGCAAATTCGA 58.573 47.619 0.00 0.00 0.00 3.71
3978 14346 1.134401 ACAGATTTCCATCGGACGCAT 60.134 47.619 0.00 0.00 34.17 4.73
3985 14353 1.672881 GGCTCCAACAGATTTCCATCG 59.327 52.381 0.00 0.00 34.17 3.84
3988 14356 0.690192 TCGGCTCCAACAGATTTCCA 59.310 50.000 0.00 0.00 0.00 3.53
4069 14437 1.737355 GCAAGTCTGGCAGCCAACAA 61.737 55.000 17.03 0.61 30.80 2.83
4184 14554 6.823678 ATTATATACGCTACGCCTATTTGC 57.176 37.500 0.00 0.00 0.00 3.68
4185 14555 8.845942 TGTATTATATACGCTACGCCTATTTG 57.154 34.615 0.00 0.00 0.00 2.32
4187 14557 7.500227 TCCTGTATTATATACGCTACGCCTATT 59.500 37.037 0.00 0.00 0.00 1.73
4188 14558 6.994496 TCCTGTATTATATACGCTACGCCTAT 59.006 38.462 0.00 0.00 0.00 2.57
4190 14560 5.188434 TCCTGTATTATATACGCTACGCCT 58.812 41.667 0.00 0.00 0.00 5.52
4192 14562 6.355397 TCTCCTGTATTATATACGCTACGC 57.645 41.667 0.00 0.00 0.00 4.42
4193 14563 9.861138 GTTATCTCCTGTATTATATACGCTACG 57.139 37.037 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.