Multiple sequence alignment - TraesCS2B01G452700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G452700 chr2B 100.000 3649 0 0 1 3649 646598870 646602518 0.000000e+00 6739.0
1 TraesCS2B01G452700 chr2B 88.192 813 80 10 704 1508 117934961 117935765 0.000000e+00 955.0
2 TraesCS2B01G452700 chr2B 88.133 691 41 16 1483 2161 117935706 117936367 0.000000e+00 784.0
3 TraesCS2B01G452700 chr2B 86.076 237 29 3 704 940 773425148 773425380 6.050000e-63 252.0
4 TraesCS2B01G452700 chr2B 83.650 263 35 7 704 963 646657341 646657084 1.310000e-59 241.0
5 TraesCS2B01G452700 chr2D 89.196 2101 135 33 704 2740 585733052 585730980 0.000000e+00 2538.0
6 TraesCS2B01G452700 chr2D 90.000 1080 78 16 1684 2737 103016781 103015706 0.000000e+00 1369.0
7 TraesCS2B01G452700 chr2D 86.752 468 42 9 241 703 540955375 540955827 1.510000e-138 503.0
8 TraesCS2B01G452700 chr2D 95.122 205 7 1 1 202 540955071 540955275 1.630000e-83 320.0
9 TraesCS2B01G452700 chr3B 87.365 2129 198 37 704 2782 813214384 813212277 0.000000e+00 2375.0
10 TraesCS2B01G452700 chr3B 88.293 410 39 7 1485 1892 635271048 635271450 1.970000e-132 483.0
11 TraesCS2B01G452700 chr3B 83.916 143 18 3 3155 3292 771128869 771129011 8.220000e-27 132.0
12 TraesCS2B01G452700 chr5B 87.459 2113 170 37 707 2782 692427110 692429164 0.000000e+00 2346.0
13 TraesCS2B01G452700 chr5B 84.397 141 18 2 3155 3291 107202768 107202908 6.360000e-28 135.0
14 TraesCS2B01G452700 chr6B 86.848 2129 177 48 704 2782 564056460 564054385 0.000000e+00 2285.0
15 TraesCS2B01G452700 chr6B 93.909 1182 69 2 1577 2758 620695263 620696441 0.000000e+00 1781.0
16 TraesCS2B01G452700 chr1D 90.265 1695 110 33 702 2354 422072809 422074490 0.000000e+00 2165.0
17 TraesCS2B01G452700 chr1D 83.922 255 37 3 704 958 422269486 422269236 1.310000e-59 241.0
18 TraesCS2B01G452700 chr4D 92.520 1270 57 6 1533 2782 43370614 43371865 0.000000e+00 1784.0
19 TraesCS2B01G452700 chr4D 92.012 1039 60 9 1720 2737 46607060 46608096 0.000000e+00 1437.0
20 TraesCS2B01G452700 chr4D 88.578 858 58 18 704 1543 43361883 43362718 0.000000e+00 1005.0
21 TraesCS2B01G452700 chr4D 87.107 318 25 11 1450 1756 346231744 346231432 2.700000e-91 346.0
22 TraesCS2B01G452700 chr4D 87.107 318 25 11 1450 1756 346267207 346266895 2.700000e-91 346.0
23 TraesCS2B01G452700 chr4D 83.398 259 35 8 704 960 346207174 346207426 2.190000e-57 233.0
24 TraesCS2B01G452700 chr5D 90.620 1258 74 19 1524 2740 369015871 369014617 0.000000e+00 1629.0
25 TraesCS2B01G452700 chr5D 85.397 856 74 25 705 1537 369016732 369015905 0.000000e+00 841.0
26 TraesCS2B01G452700 chr7A 92.837 1047 54 7 1752 2782 110524848 110525889 0.000000e+00 1498.0
27 TraesCS2B01G452700 chr7A 90.527 929 55 19 1847 2757 47490868 47489955 0.000000e+00 1197.0
28 TraesCS2B01G452700 chr7A 87.214 524 32 8 3155 3644 677279348 677278826 6.840000e-157 564.0
29 TraesCS2B01G452700 chr7A 92.448 384 27 2 2771 3152 677279774 677279391 6.890000e-152 547.0
30 TraesCS2B01G452700 chr3D 91.882 1084 64 13 1720 2782 603109092 603108012 0.000000e+00 1493.0
31 TraesCS2B01G452700 chr3D 84.507 142 17 4 3159 3295 179100095 179099954 6.360000e-28 135.0
32 TraesCS2B01G452700 chr1B 90.824 959 52 13 1842 2782 495766846 495765906 0.000000e+00 1251.0
33 TraesCS2B01G452700 chr1B 83.402 964 121 18 704 1649 148152747 148153689 0.000000e+00 857.0
34 TraesCS2B01G452700 chr6A 90.958 929 47 19 1847 2757 134202888 134203797 0.000000e+00 1216.0
35 TraesCS2B01G452700 chr6A 83.625 1087 115 36 704 1749 508298181 508299245 0.000000e+00 963.0
36 TraesCS2B01G452700 chr6A 83.099 142 19 3 3155 3291 146744606 146744465 1.380000e-24 124.0
37 TraesCS2B01G452700 chr4B 83.079 786 93 22 704 1464 611647682 611646912 0.000000e+00 678.0
38 TraesCS2B01G452700 chr2A 95.000 200 7 1 1 197 684435595 684435794 9.840000e-81 311.0
39 TraesCS2B01G452700 chr2A 89.241 158 8 5 188 337 684439970 684440126 4.810000e-44 189.0
40 TraesCS2B01G452700 chr7D 82.890 263 38 5 704 963 192449996 192450254 2.830000e-56 230.0
41 TraesCS2B01G452700 chr3A 90.909 66 5 1 3073 3137 135996715 135996650 1.810000e-13 87.9
42 TraesCS2B01G452700 chr6D 91.803 61 5 0 3231 3291 812128 812068 6.490000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G452700 chr2B 646598870 646602518 3648 False 6739.0 6739 100.0000 1 3649 1 chr2B.!!$F1 3648
1 TraesCS2B01G452700 chr2B 117934961 117936367 1406 False 869.5 955 88.1625 704 2161 2 chr2B.!!$F3 1457
2 TraesCS2B01G452700 chr2D 585730980 585733052 2072 True 2538.0 2538 89.1960 704 2740 1 chr2D.!!$R2 2036
3 TraesCS2B01G452700 chr2D 103015706 103016781 1075 True 1369.0 1369 90.0000 1684 2737 1 chr2D.!!$R1 1053
4 TraesCS2B01G452700 chr2D 540955071 540955827 756 False 411.5 503 90.9370 1 703 2 chr2D.!!$F1 702
5 TraesCS2B01G452700 chr3B 813212277 813214384 2107 True 2375.0 2375 87.3650 704 2782 1 chr3B.!!$R1 2078
6 TraesCS2B01G452700 chr5B 692427110 692429164 2054 False 2346.0 2346 87.4590 707 2782 1 chr5B.!!$F2 2075
7 TraesCS2B01G452700 chr6B 564054385 564056460 2075 True 2285.0 2285 86.8480 704 2782 1 chr6B.!!$R1 2078
8 TraesCS2B01G452700 chr6B 620695263 620696441 1178 False 1781.0 1781 93.9090 1577 2758 1 chr6B.!!$F1 1181
9 TraesCS2B01G452700 chr1D 422072809 422074490 1681 False 2165.0 2165 90.2650 702 2354 1 chr1D.!!$F1 1652
10 TraesCS2B01G452700 chr4D 43370614 43371865 1251 False 1784.0 1784 92.5200 1533 2782 1 chr4D.!!$F2 1249
11 TraesCS2B01G452700 chr4D 46607060 46608096 1036 False 1437.0 1437 92.0120 1720 2737 1 chr4D.!!$F3 1017
12 TraesCS2B01G452700 chr4D 43361883 43362718 835 False 1005.0 1005 88.5780 704 1543 1 chr4D.!!$F1 839
13 TraesCS2B01G452700 chr5D 369014617 369016732 2115 True 1235.0 1629 88.0085 705 2740 2 chr5D.!!$R1 2035
14 TraesCS2B01G452700 chr7A 110524848 110525889 1041 False 1498.0 1498 92.8370 1752 2782 1 chr7A.!!$F1 1030
15 TraesCS2B01G452700 chr7A 47489955 47490868 913 True 1197.0 1197 90.5270 1847 2757 1 chr7A.!!$R1 910
16 TraesCS2B01G452700 chr7A 677278826 677279774 948 True 555.5 564 89.8310 2771 3644 2 chr7A.!!$R2 873
17 TraesCS2B01G452700 chr3D 603108012 603109092 1080 True 1493.0 1493 91.8820 1720 2782 1 chr3D.!!$R2 1062
18 TraesCS2B01G452700 chr1B 495765906 495766846 940 True 1251.0 1251 90.8240 1842 2782 1 chr1B.!!$R1 940
19 TraesCS2B01G452700 chr1B 148152747 148153689 942 False 857.0 857 83.4020 704 1649 1 chr1B.!!$F1 945
20 TraesCS2B01G452700 chr6A 134202888 134203797 909 False 1216.0 1216 90.9580 1847 2757 1 chr6A.!!$F1 910
21 TraesCS2B01G452700 chr6A 508298181 508299245 1064 False 963.0 963 83.6250 704 1749 1 chr6A.!!$F2 1045
22 TraesCS2B01G452700 chr4B 611646912 611647682 770 True 678.0 678 83.0790 704 1464 1 chr4B.!!$R1 760

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
178 182 0.029167 TGACGACGACGCAACTAACA 59.971 50.0 7.30 0.0 43.96 2.41 F
225 229 0.029567 CGAGTCGGAGAGGGAATTCG 59.970 60.0 4.10 0.0 36.95 3.34 F
582 586 0.041238 TTGGGAGTCGTCCATCCTCT 59.959 55.0 0.00 0.0 46.07 3.69 F
606 610 0.174845 CACCCACATACCGATGACGT 59.825 55.0 0.00 0.0 36.48 4.34 F
607 611 0.174845 ACCCACATACCGATGACGTG 59.825 55.0 0.00 0.0 36.48 4.49 F
608 612 0.174845 CCCACATACCGATGACGTGT 59.825 55.0 0.00 0.0 36.48 4.49 F
639 643 0.179124 CCTCTAGAGTTCAGCGCCAC 60.179 60.0 18.42 0.0 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1273 1336 1.457455 CCACACTGCCAGGGGTTTT 60.457 57.895 0.0 0.0 0.00 2.43 R
1492 1555 1.580845 GCTGCACCACACATCTCCAC 61.581 60.000 0.0 0.0 0.00 4.02 R
1905 2207 5.071788 AGTTGACACCTTCATCCTACAGAAA 59.928 40.000 0.0 0.0 32.84 2.52 R
2587 2973 5.470368 CATAACAGTACCTCCATCATACCG 58.530 45.833 0.0 0.0 0.00 4.02 R
2595 2981 6.938698 TCTTAAACCATAACAGTACCTCCA 57.061 37.500 0.0 0.0 0.00 3.86 R
2646 3037 8.714906 AGCATAGTAGGTCCTAACATAAACATT 58.285 33.333 0.0 0.0 0.00 2.71 R
2648 3039 7.670605 AGCATAGTAGGTCCTAACATAAACA 57.329 36.000 0.0 0.0 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
95 96 0.687757 TGAGGAGATCGGTTGGGAGG 60.688 60.000 0.00 0.00 0.00 4.30
155 159 0.041312 ATCTTTGCGTGACGTTGTGC 60.041 50.000 6.91 0.00 0.00 4.57
160 164 1.651132 GCGTGACGTTGTGCTTGTG 60.651 57.895 6.91 0.00 0.00 3.33
168 172 0.043310 GTTGTGCTTGTGACGACGAC 60.043 55.000 0.00 0.00 0.00 4.34
178 182 0.029167 TGACGACGACGCAACTAACA 59.971 50.000 7.30 0.00 43.96 2.41
202 206 7.673926 ACAAACCACCCAAAGAAACATATCTAT 59.326 33.333 0.00 0.00 0.00 1.98
203 207 7.645058 AACCACCCAAAGAAACATATCTATG 57.355 36.000 0.00 0.00 39.55 2.23
205 209 7.867921 ACCACCCAAAGAAACATATCTATGTA 58.132 34.615 3.39 0.00 45.55 2.29
206 210 7.773690 ACCACCCAAAGAAACATATCTATGTAC 59.226 37.037 3.39 2.38 45.55 2.90
207 211 7.042051 CCACCCAAAGAAACATATCTATGTACG 60.042 40.741 3.39 0.00 45.55 3.67
208 212 7.709182 CACCCAAAGAAACATATCTATGTACGA 59.291 37.037 3.39 0.00 45.55 3.43
209 213 7.926555 ACCCAAAGAAACATATCTATGTACGAG 59.073 37.037 3.39 0.00 45.55 4.18
210 214 7.926555 CCCAAAGAAACATATCTATGTACGAGT 59.073 37.037 3.39 0.00 45.55 4.18
211 215 8.969267 CCAAAGAAACATATCTATGTACGAGTC 58.031 37.037 3.39 0.00 45.55 3.36
212 216 8.682895 CAAAGAAACATATCTATGTACGAGTCG 58.317 37.037 11.85 11.85 45.55 4.18
213 217 6.900189 AGAAACATATCTATGTACGAGTCGG 58.100 40.000 18.30 0.00 45.55 4.79
214 218 6.709397 AGAAACATATCTATGTACGAGTCGGA 59.291 38.462 18.30 5.06 45.55 4.55
215 219 6.483385 AACATATCTATGTACGAGTCGGAG 57.517 41.667 18.30 5.97 45.55 4.63
216 220 5.791666 ACATATCTATGTACGAGTCGGAGA 58.208 41.667 18.30 7.41 44.54 3.71
217 221 5.870433 ACATATCTATGTACGAGTCGGAGAG 59.130 44.000 18.30 6.21 44.54 3.20
218 222 3.109044 TCTATGTACGAGTCGGAGAGG 57.891 52.381 18.30 4.46 36.95 3.69
219 223 2.144730 CTATGTACGAGTCGGAGAGGG 58.855 57.143 18.30 0.00 36.95 4.30
220 224 0.545171 ATGTACGAGTCGGAGAGGGA 59.455 55.000 18.30 0.00 36.95 4.20
221 225 0.325933 TGTACGAGTCGGAGAGGGAA 59.674 55.000 18.30 0.00 36.95 3.97
222 226 1.064906 TGTACGAGTCGGAGAGGGAAT 60.065 52.381 18.30 0.00 36.95 3.01
223 227 2.022934 GTACGAGTCGGAGAGGGAATT 58.977 52.381 18.30 0.00 36.95 2.17
224 228 1.104630 ACGAGTCGGAGAGGGAATTC 58.895 55.000 18.30 0.00 36.95 2.17
225 229 0.029567 CGAGTCGGAGAGGGAATTCG 59.970 60.000 4.10 0.00 36.95 3.34
226 230 1.104630 GAGTCGGAGAGGGAATTCGT 58.895 55.000 0.00 0.00 36.95 3.85
227 231 1.477295 GAGTCGGAGAGGGAATTCGTT 59.523 52.381 0.00 0.00 36.95 3.85
228 232 1.204941 AGTCGGAGAGGGAATTCGTTG 59.795 52.381 0.00 0.00 36.95 4.10
229 233 0.108329 TCGGAGAGGGAATTCGTTGC 60.108 55.000 0.00 0.00 0.00 4.17
230 234 1.421410 CGGAGAGGGAATTCGTTGCG 61.421 60.000 0.00 0.00 0.00 4.85
231 235 0.108329 GGAGAGGGAATTCGTTGCGA 60.108 55.000 0.00 0.00 0.00 5.10
241 245 0.878416 TTCGTTGCGAATTGGAAGGG 59.122 50.000 0.00 0.00 41.05 3.95
242 246 0.958382 TCGTTGCGAATTGGAAGGGG 60.958 55.000 0.00 0.00 34.90 4.79
243 247 1.890174 GTTGCGAATTGGAAGGGGG 59.110 57.895 0.00 0.00 0.00 5.40
271 275 6.393720 CAAATTTTGCTACGATTCCTTTGG 57.606 37.500 0.00 0.00 0.00 3.28
272 276 5.722021 AATTTTGCTACGATTCCTTTGGT 57.278 34.783 0.00 0.00 0.00 3.67
273 277 5.722021 ATTTTGCTACGATTCCTTTGGTT 57.278 34.783 0.00 0.00 0.00 3.67
274 278 5.523438 TTTTGCTACGATTCCTTTGGTTT 57.477 34.783 0.00 0.00 0.00 3.27
275 279 5.523438 TTTGCTACGATTCCTTTGGTTTT 57.477 34.783 0.00 0.00 0.00 2.43
276 280 5.523438 TTGCTACGATTCCTTTGGTTTTT 57.477 34.783 0.00 0.00 0.00 1.94
307 311 3.952535 GTGTCAAACACGCTTTTGATCT 58.047 40.909 13.43 0.00 45.04 2.75
308 312 5.090652 GTGTCAAACACGCTTTTGATCTA 57.909 39.130 13.43 3.67 45.04 1.98
309 313 5.507077 GTGTCAAACACGCTTTTGATCTAA 58.493 37.500 13.43 0.00 45.04 2.10
310 314 6.142817 GTGTCAAACACGCTTTTGATCTAAT 58.857 36.000 13.43 0.00 45.04 1.73
311 315 7.295201 GTGTCAAACACGCTTTTGATCTAATA 58.705 34.615 13.43 0.00 45.04 0.98
312 316 7.801315 GTGTCAAACACGCTTTTGATCTAATAA 59.199 33.333 13.43 0.00 45.04 1.40
313 317 8.346300 TGTCAAACACGCTTTTGATCTAATAAA 58.654 29.630 13.43 0.00 45.04 1.40
314 318 9.341899 GTCAAACACGCTTTTGATCTAATAAAT 57.658 29.630 13.43 0.00 45.04 1.40
315 319 9.554724 TCAAACACGCTTTTGATCTAATAAATC 57.445 29.630 7.72 0.00 39.94 2.17
316 320 8.798153 CAAACACGCTTTTGATCTAATAAATCC 58.202 33.333 3.75 0.00 38.54 3.01
317 321 7.027778 ACACGCTTTTGATCTAATAAATCCC 57.972 36.000 0.00 0.00 0.00 3.85
318 322 6.601613 ACACGCTTTTGATCTAATAAATCCCA 59.398 34.615 0.00 0.00 0.00 4.37
319 323 7.134815 CACGCTTTTGATCTAATAAATCCCAG 58.865 38.462 0.00 0.00 0.00 4.45
320 324 7.012327 CACGCTTTTGATCTAATAAATCCCAGA 59.988 37.037 0.00 0.00 0.00 3.86
321 325 7.721399 ACGCTTTTGATCTAATAAATCCCAGAT 59.279 33.333 0.00 0.00 0.00 2.90
322 326 8.571336 CGCTTTTGATCTAATAAATCCCAGATT 58.429 33.333 0.00 0.00 0.00 2.40
338 342 9.713684 AATCCCAGATTTTAAAATCATGTAGGA 57.286 29.630 32.22 27.65 45.59 2.94
339 343 9.887862 ATCCCAGATTTTAAAATCATGTAGGAT 57.112 29.630 32.22 28.26 45.59 3.24
340 344 9.713684 TCCCAGATTTTAAAATCATGTAGGATT 57.286 29.630 32.22 13.42 45.59 3.01
348 352 8.752005 TTAAAATCATGTAGGATTTGAGAGGG 57.248 34.615 5.41 0.00 44.47 4.30
349 353 3.845781 TCATGTAGGATTTGAGAGGGC 57.154 47.619 0.00 0.00 0.00 5.19
350 354 3.114606 TCATGTAGGATTTGAGAGGGCA 58.885 45.455 0.00 0.00 0.00 5.36
351 355 3.718434 TCATGTAGGATTTGAGAGGGCAT 59.282 43.478 0.00 0.00 0.00 4.40
352 356 3.565764 TGTAGGATTTGAGAGGGCATG 57.434 47.619 0.00 0.00 0.00 4.06
353 357 2.225467 GTAGGATTTGAGAGGGCATGC 58.775 52.381 9.90 9.90 0.00 4.06
354 358 0.106318 AGGATTTGAGAGGGCATGCC 60.106 55.000 29.47 29.47 0.00 4.40
355 359 0.396139 GGATTTGAGAGGGCATGCCA 60.396 55.000 36.56 16.15 37.98 4.92
356 360 0.743097 GATTTGAGAGGGCATGCCAC 59.257 55.000 36.56 27.88 37.98 5.01
357 361 0.333993 ATTTGAGAGGGCATGCCACT 59.666 50.000 36.56 31.63 37.98 4.00
358 362 0.112995 TTTGAGAGGGCATGCCACTT 59.887 50.000 36.56 21.93 37.98 3.16
359 363 0.322816 TTGAGAGGGCATGCCACTTC 60.323 55.000 36.56 27.85 37.98 3.01
360 364 1.300963 GAGAGGGCATGCCACTTCA 59.699 57.895 36.56 0.00 37.98 3.02
361 365 0.322816 GAGAGGGCATGCCACTTCAA 60.323 55.000 36.56 0.00 37.98 2.69
362 366 0.333993 AGAGGGCATGCCACTTCAAT 59.666 50.000 36.56 13.65 37.98 2.57
363 367 1.188863 GAGGGCATGCCACTTCAATT 58.811 50.000 36.56 11.86 37.98 2.32
364 368 2.025037 AGAGGGCATGCCACTTCAATTA 60.025 45.455 36.56 0.00 37.98 1.40
365 369 2.961062 GAGGGCATGCCACTTCAATTAT 59.039 45.455 36.56 8.80 37.98 1.28
366 370 2.696707 AGGGCATGCCACTTCAATTATG 59.303 45.455 36.56 0.00 37.98 1.90
367 371 2.431782 GGGCATGCCACTTCAATTATGT 59.568 45.455 36.56 0.00 37.98 2.29
368 372 3.450578 GGCATGCCACTTCAATTATGTG 58.549 45.455 32.08 0.00 35.81 3.21
369 373 3.119029 GGCATGCCACTTCAATTATGTGT 60.119 43.478 32.08 0.00 32.63 3.72
370 374 4.497300 GCATGCCACTTCAATTATGTGTT 58.503 39.130 6.36 0.00 32.63 3.32
371 375 4.931002 GCATGCCACTTCAATTATGTGTTT 59.069 37.500 6.36 0.00 32.63 2.83
372 376 5.409214 GCATGCCACTTCAATTATGTGTTTT 59.591 36.000 6.36 0.00 32.63 2.43
373 377 6.401367 GCATGCCACTTCAATTATGTGTTTTC 60.401 38.462 6.36 0.00 32.63 2.29
374 378 6.403866 TGCCACTTCAATTATGTGTTTTCT 57.596 33.333 0.00 0.00 32.63 2.52
375 379 6.446318 TGCCACTTCAATTATGTGTTTTCTC 58.554 36.000 0.00 0.00 32.63 2.87
376 380 6.265196 TGCCACTTCAATTATGTGTTTTCTCT 59.735 34.615 0.00 0.00 32.63 3.10
377 381 6.803807 GCCACTTCAATTATGTGTTTTCTCTC 59.196 38.462 0.00 0.00 32.63 3.20
378 382 7.308435 CCACTTCAATTATGTGTTTTCTCTCC 58.692 38.462 0.00 0.00 32.63 3.71
379 383 7.175641 CCACTTCAATTATGTGTTTTCTCTCCT 59.824 37.037 0.00 0.00 32.63 3.69
380 384 8.233190 CACTTCAATTATGTGTTTTCTCTCCTC 58.767 37.037 0.00 0.00 0.00 3.71
381 385 7.391833 ACTTCAATTATGTGTTTTCTCTCCTCC 59.608 37.037 0.00 0.00 0.00 4.30
382 386 6.778821 TCAATTATGTGTTTTCTCTCCTCCA 58.221 36.000 0.00 0.00 0.00 3.86
383 387 7.405292 TCAATTATGTGTTTTCTCTCCTCCAT 58.595 34.615 0.00 0.00 0.00 3.41
384 388 7.890127 TCAATTATGTGTTTTCTCTCCTCCATT 59.110 33.333 0.00 0.00 0.00 3.16
385 389 8.526147 CAATTATGTGTTTTCTCTCCTCCATTT 58.474 33.333 0.00 0.00 0.00 2.32
386 390 8.655935 ATTATGTGTTTTCTCTCCTCCATTTT 57.344 30.769 0.00 0.00 0.00 1.82
387 391 5.772825 TGTGTTTTCTCTCCTCCATTTTG 57.227 39.130 0.00 0.00 0.00 2.44
388 392 5.445069 TGTGTTTTCTCTCCTCCATTTTGA 58.555 37.500 0.00 0.00 0.00 2.69
389 393 5.532406 TGTGTTTTCTCTCCTCCATTTTGAG 59.468 40.000 0.00 0.00 0.00 3.02
390 394 5.765182 GTGTTTTCTCTCCTCCATTTTGAGA 59.235 40.000 0.00 0.00 34.11 3.27
391 395 6.263168 GTGTTTTCTCTCCTCCATTTTGAGAA 59.737 38.462 0.00 0.00 40.58 2.87
392 396 7.006509 TGTTTTCTCTCCTCCATTTTGAGAAT 58.993 34.615 0.00 0.00 41.47 2.40
393 397 7.175641 TGTTTTCTCTCCTCCATTTTGAGAATC 59.824 37.037 0.00 0.00 41.47 2.52
394 398 5.365021 TCTCTCCTCCATTTTGAGAATCC 57.635 43.478 0.00 0.00 34.91 3.01
395 399 5.035556 TCTCTCCTCCATTTTGAGAATCCT 58.964 41.667 0.00 0.00 34.91 3.24
396 400 6.205298 TCTCTCCTCCATTTTGAGAATCCTA 58.795 40.000 0.00 0.00 34.91 2.94
397 401 6.098982 TCTCTCCTCCATTTTGAGAATCCTAC 59.901 42.308 0.00 0.00 34.91 3.18
398 402 5.131142 TCTCCTCCATTTTGAGAATCCTACC 59.869 44.000 0.00 0.00 34.11 3.18
399 403 4.788075 TCCTCCATTTTGAGAATCCTACCA 59.212 41.667 0.00 0.00 34.11 3.25
400 404 5.252863 TCCTCCATTTTGAGAATCCTACCAA 59.747 40.000 0.00 0.00 34.11 3.67
401 405 6.068853 TCCTCCATTTTGAGAATCCTACCAAT 60.069 38.462 0.00 0.00 34.11 3.16
402 406 6.264067 CCTCCATTTTGAGAATCCTACCAATC 59.736 42.308 0.00 0.00 34.11 2.67
403 407 6.730447 TCCATTTTGAGAATCCTACCAATCA 58.270 36.000 0.00 0.00 0.00 2.57
404 408 7.181361 TCCATTTTGAGAATCCTACCAATCAA 58.819 34.615 0.00 0.00 0.00 2.57
405 409 7.673504 TCCATTTTGAGAATCCTACCAATCAAA 59.326 33.333 0.00 0.00 35.50 2.69
406 410 7.977853 CCATTTTGAGAATCCTACCAATCAAAG 59.022 37.037 0.00 0.00 37.78 2.77
407 411 8.742777 CATTTTGAGAATCCTACCAATCAAAGA 58.257 33.333 0.00 0.00 37.78 2.52
408 412 7.928307 TTTGAGAATCCTACCAATCAAAGAG 57.072 36.000 0.00 0.00 33.16 2.85
409 413 6.874278 TGAGAATCCTACCAATCAAAGAGA 57.126 37.500 0.00 0.00 0.00 3.10
410 414 6.644347 TGAGAATCCTACCAATCAAAGAGAC 58.356 40.000 0.00 0.00 0.00 3.36
411 415 5.665459 AGAATCCTACCAATCAAAGAGACG 58.335 41.667 0.00 0.00 0.00 4.18
412 416 5.187967 AGAATCCTACCAATCAAAGAGACGT 59.812 40.000 0.00 0.00 0.00 4.34
413 417 4.884668 TCCTACCAATCAAAGAGACGTT 57.115 40.909 0.00 0.00 0.00 3.99
414 418 5.988310 TCCTACCAATCAAAGAGACGTTA 57.012 39.130 0.00 0.00 0.00 3.18
415 419 6.349243 TCCTACCAATCAAAGAGACGTTAA 57.651 37.500 0.00 0.00 0.00 2.01
416 420 6.761312 TCCTACCAATCAAAGAGACGTTAAA 58.239 36.000 0.00 0.00 0.00 1.52
417 421 7.391620 TCCTACCAATCAAAGAGACGTTAAAT 58.608 34.615 0.00 0.00 0.00 1.40
418 422 8.533657 TCCTACCAATCAAAGAGACGTTAAATA 58.466 33.333 0.00 0.00 0.00 1.40
419 423 9.326413 CCTACCAATCAAAGAGACGTTAAATAT 57.674 33.333 0.00 0.00 0.00 1.28
421 425 8.561738 ACCAATCAAAGAGACGTTAAATATGT 57.438 30.769 0.00 0.00 0.00 2.29
422 426 9.010029 ACCAATCAAAGAGACGTTAAATATGTT 57.990 29.630 0.00 0.00 0.00 2.71
423 427 9.490663 CCAATCAAAGAGACGTTAAATATGTTC 57.509 33.333 0.00 0.00 0.00 3.18
424 428 9.199184 CAATCAAAGAGACGTTAAATATGTTCG 57.801 33.333 0.00 0.00 0.00 3.95
425 429 8.697846 ATCAAAGAGACGTTAAATATGTTCGA 57.302 30.769 0.00 0.00 0.00 3.71
426 430 7.946043 TCAAAGAGACGTTAAATATGTTCGAC 58.054 34.615 0.00 0.00 0.00 4.20
427 431 6.550371 AAGAGACGTTAAATATGTTCGACG 57.450 37.500 8.17 8.17 34.04 5.12
428 432 5.634896 AGAGACGTTAAATATGTTCGACGT 58.365 37.500 13.16 13.16 39.70 4.34
429 433 5.510674 AGAGACGTTAAATATGTTCGACGTG 59.489 40.000 16.59 0.00 38.23 4.49
430 434 5.156355 AGACGTTAAATATGTTCGACGTGT 58.844 37.500 16.59 11.81 38.23 4.49
431 435 5.060077 AGACGTTAAATATGTTCGACGTGTG 59.940 40.000 16.59 0.00 38.23 3.82
432 436 4.681025 ACGTTAAATATGTTCGACGTGTGT 59.319 37.500 12.72 0.00 37.37 3.72
433 437 5.164158 ACGTTAAATATGTTCGACGTGTGTC 60.164 40.000 12.72 0.00 37.37 3.67
434 438 5.544621 GTTAAATATGTTCGACGTGTGTCC 58.455 41.667 0.00 0.00 42.37 4.02
435 439 3.587797 AATATGTTCGACGTGTGTCCT 57.412 42.857 0.00 0.00 42.37 3.85
436 440 4.707030 AATATGTTCGACGTGTGTCCTA 57.293 40.909 0.00 0.00 42.37 2.94
437 441 4.913335 ATATGTTCGACGTGTGTCCTAT 57.087 40.909 0.00 0.00 42.37 2.57
438 442 2.341318 TGTTCGACGTGTGTCCTATG 57.659 50.000 0.00 0.00 42.37 2.23
439 443 1.881324 TGTTCGACGTGTGTCCTATGA 59.119 47.619 0.00 0.00 42.37 2.15
440 444 2.490509 TGTTCGACGTGTGTCCTATGAT 59.509 45.455 0.00 0.00 42.37 2.45
441 445 2.844122 TCGACGTGTGTCCTATGATG 57.156 50.000 0.00 0.00 42.37 3.07
442 446 2.089201 TCGACGTGTGTCCTATGATGT 58.911 47.619 0.00 0.00 42.37 3.06
443 447 2.159435 TCGACGTGTGTCCTATGATGTG 60.159 50.000 0.00 0.00 42.37 3.21
444 448 1.927174 GACGTGTGTCCTATGATGTGC 59.073 52.381 0.00 0.00 39.30 4.57
445 449 1.275010 ACGTGTGTCCTATGATGTGCA 59.725 47.619 0.00 0.00 0.00 4.57
446 450 2.289382 ACGTGTGTCCTATGATGTGCAA 60.289 45.455 0.00 0.00 0.00 4.08
447 451 2.741517 CGTGTGTCCTATGATGTGCAAA 59.258 45.455 0.00 0.00 0.00 3.68
448 452 3.374988 CGTGTGTCCTATGATGTGCAAAT 59.625 43.478 0.00 0.00 0.00 2.32
449 453 4.665212 GTGTGTCCTATGATGTGCAAATG 58.335 43.478 0.00 0.00 0.00 2.32
450 454 4.156556 GTGTGTCCTATGATGTGCAAATGT 59.843 41.667 0.00 0.00 0.00 2.71
451 455 4.156373 TGTGTCCTATGATGTGCAAATGTG 59.844 41.667 0.00 0.00 0.00 3.21
452 456 4.156556 GTGTCCTATGATGTGCAAATGTGT 59.843 41.667 0.00 0.00 0.00 3.72
453 457 4.766373 TGTCCTATGATGTGCAAATGTGTT 59.234 37.500 0.00 0.00 0.00 3.32
454 458 5.243507 TGTCCTATGATGTGCAAATGTGTTT 59.756 36.000 0.00 0.00 0.00 2.83
455 459 6.158598 GTCCTATGATGTGCAAATGTGTTTT 58.841 36.000 0.00 0.00 0.00 2.43
456 460 6.089820 GTCCTATGATGTGCAAATGTGTTTTG 59.910 38.462 0.00 0.00 46.22 2.44
466 470 5.827568 CAAATGTGTTTTGCAGGTACATC 57.172 39.130 7.94 1.74 38.42 3.06
467 471 5.288015 CAAATGTGTTTTGCAGGTACATCA 58.712 37.500 7.94 5.90 38.42 3.07
468 472 3.980646 TGTGTTTTGCAGGTACATCAC 57.019 42.857 0.00 0.00 0.00 3.06
469 473 3.282885 TGTGTTTTGCAGGTACATCACA 58.717 40.909 0.00 0.00 33.24 3.58
470 474 3.314913 TGTGTTTTGCAGGTACATCACAG 59.685 43.478 0.00 0.00 32.21 3.66
471 475 2.293122 TGTTTTGCAGGTACATCACAGC 59.707 45.455 0.00 0.00 0.00 4.40
472 476 2.554032 GTTTTGCAGGTACATCACAGCT 59.446 45.455 0.00 0.00 32.61 4.24
473 477 2.566833 TTGCAGGTACATCACAGCTT 57.433 45.000 0.00 0.00 32.61 3.74
474 478 2.566833 TGCAGGTACATCACAGCTTT 57.433 45.000 0.00 0.00 32.61 3.51
475 479 3.694043 TGCAGGTACATCACAGCTTTA 57.306 42.857 0.00 0.00 32.61 1.85
476 480 4.220693 TGCAGGTACATCACAGCTTTAT 57.779 40.909 0.00 0.00 32.61 1.40
477 481 4.588899 TGCAGGTACATCACAGCTTTATT 58.411 39.130 0.00 0.00 32.61 1.40
478 482 4.635765 TGCAGGTACATCACAGCTTTATTC 59.364 41.667 0.00 0.00 32.61 1.75
479 483 4.035675 GCAGGTACATCACAGCTTTATTCC 59.964 45.833 0.00 0.00 0.00 3.01
480 484 4.271049 CAGGTACATCACAGCTTTATTCCG 59.729 45.833 0.00 0.00 0.00 4.30
481 485 4.161565 AGGTACATCACAGCTTTATTCCGA 59.838 41.667 0.00 0.00 0.00 4.55
482 486 4.873827 GGTACATCACAGCTTTATTCCGAA 59.126 41.667 0.00 0.00 0.00 4.30
483 487 5.527582 GGTACATCACAGCTTTATTCCGAAT 59.472 40.000 0.00 0.00 0.00 3.34
484 488 6.704493 GGTACATCACAGCTTTATTCCGAATA 59.296 38.462 0.00 0.00 0.00 1.75
485 489 7.225931 GGTACATCACAGCTTTATTCCGAATAA 59.774 37.037 9.15 9.15 0.00 1.40
486 490 7.251704 ACATCACAGCTTTATTCCGAATAAG 57.748 36.000 12.29 8.87 35.00 1.73
487 491 5.734855 TCACAGCTTTATTCCGAATAAGC 57.265 39.130 18.20 18.20 35.00 3.09
488 492 4.574828 TCACAGCTTTATTCCGAATAAGCC 59.425 41.667 20.24 13.48 35.00 4.35
489 493 4.335315 CACAGCTTTATTCCGAATAAGCCA 59.665 41.667 20.24 7.28 35.00 4.75
490 494 4.947388 ACAGCTTTATTCCGAATAAGCCAA 59.053 37.500 20.24 7.03 35.00 4.52
491 495 5.066505 ACAGCTTTATTCCGAATAAGCCAAG 59.933 40.000 20.24 13.99 35.00 3.61
492 496 5.296780 CAGCTTTATTCCGAATAAGCCAAGA 59.703 40.000 20.24 6.28 35.00 3.02
493 497 5.297029 AGCTTTATTCCGAATAAGCCAAGAC 59.703 40.000 20.24 10.81 35.00 3.01
494 498 5.297029 GCTTTATTCCGAATAAGCCAAGACT 59.703 40.000 12.29 0.00 35.00 3.24
495 499 6.511929 GCTTTATTCCGAATAAGCCAAGACTC 60.512 42.308 12.29 0.00 35.00 3.36
496 500 4.762289 ATTCCGAATAAGCCAAGACTCT 57.238 40.909 0.00 0.00 0.00 3.24
497 501 5.871396 ATTCCGAATAAGCCAAGACTCTA 57.129 39.130 0.00 0.00 0.00 2.43
498 502 4.650754 TCCGAATAAGCCAAGACTCTAC 57.349 45.455 0.00 0.00 0.00 2.59
499 503 4.021229 TCCGAATAAGCCAAGACTCTACA 58.979 43.478 0.00 0.00 0.00 2.74
500 504 4.464951 TCCGAATAAGCCAAGACTCTACAA 59.535 41.667 0.00 0.00 0.00 2.41
501 505 5.046878 TCCGAATAAGCCAAGACTCTACAAA 60.047 40.000 0.00 0.00 0.00 2.83
502 506 5.817816 CCGAATAAGCCAAGACTCTACAAAT 59.182 40.000 0.00 0.00 0.00 2.32
503 507 6.316390 CCGAATAAGCCAAGACTCTACAAATT 59.684 38.462 0.00 0.00 0.00 1.82
504 508 7.494625 CCGAATAAGCCAAGACTCTACAAATTA 59.505 37.037 0.00 0.00 0.00 1.40
505 509 8.879759 CGAATAAGCCAAGACTCTACAAATTAA 58.120 33.333 0.00 0.00 0.00 1.40
508 512 6.910536 AGCCAAGACTCTACAAATTAATCG 57.089 37.500 0.00 0.00 0.00 3.34
509 513 6.640518 AGCCAAGACTCTACAAATTAATCGA 58.359 36.000 0.00 0.00 0.00 3.59
510 514 7.103641 AGCCAAGACTCTACAAATTAATCGAA 58.896 34.615 0.00 0.00 0.00 3.71
511 515 7.064728 AGCCAAGACTCTACAAATTAATCGAAC 59.935 37.037 0.00 0.00 0.00 3.95
512 516 7.391786 CCAAGACTCTACAAATTAATCGAACG 58.608 38.462 0.00 0.00 0.00 3.95
513 517 6.570690 AGACTCTACAAATTAATCGAACGC 57.429 37.500 0.00 0.00 0.00 4.84
514 518 5.519206 AGACTCTACAAATTAATCGAACGCC 59.481 40.000 0.00 0.00 0.00 5.68
515 519 5.172934 ACTCTACAAATTAATCGAACGCCA 58.827 37.500 0.00 0.00 0.00 5.69
516 520 5.063060 ACTCTACAAATTAATCGAACGCCAC 59.937 40.000 0.00 0.00 0.00 5.01
517 521 4.930405 TCTACAAATTAATCGAACGCCACA 59.070 37.500 0.00 0.00 0.00 4.17
518 522 4.491234 ACAAATTAATCGAACGCCACAA 57.509 36.364 0.00 0.00 0.00 3.33
519 523 5.054390 ACAAATTAATCGAACGCCACAAT 57.946 34.783 0.00 0.00 0.00 2.71
520 524 5.092781 ACAAATTAATCGAACGCCACAATC 58.907 37.500 0.00 0.00 0.00 2.67
521 525 4.955925 AATTAATCGAACGCCACAATCA 57.044 36.364 0.00 0.00 0.00 2.57
522 526 3.733024 TTAATCGAACGCCACAATCAC 57.267 42.857 0.00 0.00 0.00 3.06
523 527 1.518325 AATCGAACGCCACAATCACA 58.482 45.000 0.00 0.00 0.00 3.58
524 528 1.518325 ATCGAACGCCACAATCACAA 58.482 45.000 0.00 0.00 0.00 3.33
525 529 0.865111 TCGAACGCCACAATCACAAG 59.135 50.000 0.00 0.00 0.00 3.16
526 530 0.865111 CGAACGCCACAATCACAAGA 59.135 50.000 0.00 0.00 0.00 3.02
527 531 1.262950 CGAACGCCACAATCACAAGAA 59.737 47.619 0.00 0.00 0.00 2.52
528 532 2.286713 CGAACGCCACAATCACAAGAAA 60.287 45.455 0.00 0.00 0.00 2.52
529 533 3.701241 GAACGCCACAATCACAAGAAAA 58.299 40.909 0.00 0.00 0.00 2.29
530 534 3.078594 ACGCCACAATCACAAGAAAAC 57.921 42.857 0.00 0.00 0.00 2.43
531 535 2.425312 ACGCCACAATCACAAGAAAACA 59.575 40.909 0.00 0.00 0.00 2.83
532 536 3.119316 ACGCCACAATCACAAGAAAACAA 60.119 39.130 0.00 0.00 0.00 2.83
533 537 3.242712 CGCCACAATCACAAGAAAACAAC 59.757 43.478 0.00 0.00 0.00 3.32
534 538 4.432712 GCCACAATCACAAGAAAACAACT 58.567 39.130 0.00 0.00 0.00 3.16
535 539 4.268405 GCCACAATCACAAGAAAACAACTG 59.732 41.667 0.00 0.00 0.00 3.16
536 540 5.649557 CCACAATCACAAGAAAACAACTGA 58.350 37.500 0.00 0.00 0.00 3.41
537 541 6.098679 CCACAATCACAAGAAAACAACTGAA 58.901 36.000 0.00 0.00 0.00 3.02
538 542 6.254157 CCACAATCACAAGAAAACAACTGAAG 59.746 38.462 0.00 0.00 0.00 3.02
539 543 5.807011 ACAATCACAAGAAAACAACTGAAGC 59.193 36.000 0.00 0.00 0.00 3.86
540 544 5.581126 ATCACAAGAAAACAACTGAAGCA 57.419 34.783 0.00 0.00 0.00 3.91
541 545 5.384063 TCACAAGAAAACAACTGAAGCAA 57.616 34.783 0.00 0.00 0.00 3.91
542 546 5.777802 TCACAAGAAAACAACTGAAGCAAA 58.222 33.333 0.00 0.00 0.00 3.68
543 547 6.219473 TCACAAGAAAACAACTGAAGCAAAA 58.781 32.000 0.00 0.00 0.00 2.44
544 548 6.873076 TCACAAGAAAACAACTGAAGCAAAAT 59.127 30.769 0.00 0.00 0.00 1.82
545 549 8.031864 TCACAAGAAAACAACTGAAGCAAAATA 58.968 29.630 0.00 0.00 0.00 1.40
546 550 8.655092 CACAAGAAAACAACTGAAGCAAAATAA 58.345 29.630 0.00 0.00 0.00 1.40
547 551 9.213799 ACAAGAAAACAACTGAAGCAAAATAAA 57.786 25.926 0.00 0.00 0.00 1.40
572 576 7.553881 AATACAATTACATCTTTGGGAGTCG 57.446 36.000 0.00 0.00 0.00 4.18
573 577 4.906618 ACAATTACATCTTTGGGAGTCGT 58.093 39.130 0.00 0.00 0.00 4.34
574 578 4.935808 ACAATTACATCTTTGGGAGTCGTC 59.064 41.667 0.00 0.00 0.00 4.20
575 579 3.604875 TTACATCTTTGGGAGTCGTCC 57.395 47.619 0.00 0.00 43.05 4.79
576 580 1.348064 ACATCTTTGGGAGTCGTCCA 58.652 50.000 0.00 0.00 46.07 4.02
577 581 1.909302 ACATCTTTGGGAGTCGTCCAT 59.091 47.619 0.00 0.00 46.07 3.41
578 582 2.093447 ACATCTTTGGGAGTCGTCCATC 60.093 50.000 0.00 0.00 46.07 3.51
579 583 0.902531 TCTTTGGGAGTCGTCCATCC 59.097 55.000 0.00 0.00 46.07 3.51
580 584 0.905357 CTTTGGGAGTCGTCCATCCT 59.095 55.000 0.00 0.00 46.07 3.24
581 585 0.902531 TTTGGGAGTCGTCCATCCTC 59.097 55.000 0.00 0.00 46.07 3.71
582 586 0.041238 TTGGGAGTCGTCCATCCTCT 59.959 55.000 0.00 0.00 46.07 3.69
583 587 0.395862 TGGGAGTCGTCCATCCTCTC 60.396 60.000 0.00 0.00 46.07 3.20
584 588 1.110518 GGGAGTCGTCCATCCTCTCC 61.111 65.000 0.00 0.00 46.07 3.71
585 589 0.395862 GGAGTCGTCCATCCTCTCCA 60.396 60.000 0.00 0.00 43.31 3.86
586 590 0.741915 GAGTCGTCCATCCTCTCCAC 59.258 60.000 0.00 0.00 0.00 4.02
587 591 0.684805 AGTCGTCCATCCTCTCCACC 60.685 60.000 0.00 0.00 0.00 4.61
588 592 0.970937 GTCGTCCATCCTCTCCACCA 60.971 60.000 0.00 0.00 0.00 4.17
589 593 0.970937 TCGTCCATCCTCTCCACCAC 60.971 60.000 0.00 0.00 0.00 4.16
590 594 1.908483 GTCCATCCTCTCCACCACC 59.092 63.158 0.00 0.00 0.00 4.61
591 595 1.306997 TCCATCCTCTCCACCACCC 60.307 63.158 0.00 0.00 0.00 4.61
592 596 1.616327 CCATCCTCTCCACCACCCA 60.616 63.158 0.00 0.00 0.00 4.51
593 597 1.604378 CATCCTCTCCACCACCCAC 59.396 63.158 0.00 0.00 0.00 4.61
594 598 1.160870 ATCCTCTCCACCACCCACA 59.839 57.895 0.00 0.00 0.00 4.17
595 599 0.253347 ATCCTCTCCACCACCCACAT 60.253 55.000 0.00 0.00 0.00 3.21
596 600 0.415830 TCCTCTCCACCACCCACATA 59.584 55.000 0.00 0.00 0.00 2.29
597 601 0.541863 CCTCTCCACCACCCACATAC 59.458 60.000 0.00 0.00 0.00 2.39
598 602 0.541863 CTCTCCACCACCCACATACC 59.458 60.000 0.00 0.00 0.00 2.73
599 603 1.220749 CTCCACCACCCACATACCG 59.779 63.158 0.00 0.00 0.00 4.02
600 604 1.229241 TCCACCACCCACATACCGA 60.229 57.895 0.00 0.00 0.00 4.69
601 605 0.619255 TCCACCACCCACATACCGAT 60.619 55.000 0.00 0.00 0.00 4.18
602 606 0.463654 CCACCACCCACATACCGATG 60.464 60.000 0.00 0.00 39.16 3.84
603 607 0.539518 CACCACCCACATACCGATGA 59.460 55.000 0.00 0.00 36.48 2.92
604 608 0.539986 ACCACCCACATACCGATGAC 59.460 55.000 0.00 0.00 36.48 3.06
605 609 0.529773 CCACCCACATACCGATGACG 60.530 60.000 0.00 0.00 36.48 4.35
606 610 0.174845 CACCCACATACCGATGACGT 59.825 55.000 0.00 0.00 36.48 4.34
607 611 0.174845 ACCCACATACCGATGACGTG 59.825 55.000 0.00 0.00 36.48 4.49
608 612 0.174845 CCCACATACCGATGACGTGT 59.825 55.000 0.00 0.00 36.48 4.49
609 613 1.556564 CCACATACCGATGACGTGTC 58.443 55.000 0.00 0.00 36.48 3.67
610 614 1.135228 CCACATACCGATGACGTGTCA 60.135 52.381 4.99 4.99 44.59 3.58
611 615 2.601804 CACATACCGATGACGTGTCAA 58.398 47.619 6.80 0.00 43.58 3.18
612 616 2.990514 CACATACCGATGACGTGTCAAA 59.009 45.455 6.80 0.00 43.58 2.69
613 617 3.060761 CACATACCGATGACGTGTCAAAG 59.939 47.826 6.80 4.19 43.58 2.77
614 618 3.250744 CATACCGATGACGTGTCAAAGT 58.749 45.455 6.80 7.34 43.58 2.66
615 619 2.234300 ACCGATGACGTGTCAAAGTT 57.766 45.000 6.80 0.00 43.58 2.66
616 620 1.864711 ACCGATGACGTGTCAAAGTTG 59.135 47.619 6.80 0.00 43.58 3.16
617 621 1.398451 CCGATGACGTGTCAAAGTTGC 60.398 52.381 6.80 0.00 43.58 4.17
618 622 1.398451 CGATGACGTGTCAAAGTTGCC 60.398 52.381 6.80 0.00 43.58 4.52
619 623 0.586319 ATGACGTGTCAAAGTTGCCG 59.414 50.000 6.80 0.00 43.58 5.69
620 624 1.368850 GACGTGTCAAAGTTGCCGC 60.369 57.895 0.00 0.00 0.00 6.53
621 625 2.051345 CGTGTCAAAGTTGCCGCC 60.051 61.111 0.00 0.00 0.00 6.13
622 626 2.542907 CGTGTCAAAGTTGCCGCCT 61.543 57.895 0.00 0.00 0.00 5.52
623 627 1.282875 GTGTCAAAGTTGCCGCCTC 59.717 57.895 0.00 0.00 0.00 4.70
624 628 1.148273 TGTCAAAGTTGCCGCCTCT 59.852 52.632 0.00 0.00 0.00 3.69
625 629 0.394938 TGTCAAAGTTGCCGCCTCTA 59.605 50.000 0.00 0.00 0.00 2.43
626 630 1.079503 GTCAAAGTTGCCGCCTCTAG 58.920 55.000 0.00 0.00 0.00 2.43
627 631 0.973632 TCAAAGTTGCCGCCTCTAGA 59.026 50.000 0.00 0.00 0.00 2.43
628 632 1.066858 TCAAAGTTGCCGCCTCTAGAG 60.067 52.381 13.18 13.18 0.00 2.43
629 633 0.977395 AAAGTTGCCGCCTCTAGAGT 59.023 50.000 18.42 0.00 0.00 3.24
630 634 0.977395 AAGTTGCCGCCTCTAGAGTT 59.023 50.000 18.42 0.78 0.00 3.01
631 635 0.533032 AGTTGCCGCCTCTAGAGTTC 59.467 55.000 18.42 8.80 0.00 3.01
632 636 0.246635 GTTGCCGCCTCTAGAGTTCA 59.753 55.000 18.42 7.53 0.00 3.18
633 637 0.532573 TTGCCGCCTCTAGAGTTCAG 59.467 55.000 18.42 4.29 0.00 3.02
634 638 1.227118 GCCGCCTCTAGAGTTCAGC 60.227 63.158 18.42 12.92 0.00 4.26
635 639 1.064946 CCGCCTCTAGAGTTCAGCG 59.935 63.158 25.22 25.22 42.99 5.18
636 640 1.587613 CGCCTCTAGAGTTCAGCGC 60.588 63.158 22.31 14.75 36.89 5.92
637 641 1.227118 GCCTCTAGAGTTCAGCGCC 60.227 63.158 18.42 0.00 0.00 6.53
638 642 1.949847 GCCTCTAGAGTTCAGCGCCA 61.950 60.000 18.42 0.00 0.00 5.69
639 643 0.179124 CCTCTAGAGTTCAGCGCCAC 60.179 60.000 18.42 0.00 0.00 5.01
640 644 0.814457 CTCTAGAGTTCAGCGCCACT 59.186 55.000 11.89 3.49 0.00 4.00
686 690 9.961265 ATCTTATGAGTGCATTTTTGTATCATG 57.039 29.630 0.00 0.00 35.94 3.07
687 691 8.959548 TCTTATGAGTGCATTTTTGTATCATGT 58.040 29.630 0.00 0.00 35.94 3.21
688 692 9.577110 CTTATGAGTGCATTTTTGTATCATGTT 57.423 29.630 0.00 0.00 35.94 2.71
689 693 9.571810 TTATGAGTGCATTTTTGTATCATGTTC 57.428 29.630 0.00 0.00 35.94 3.18
690 694 7.218228 TGAGTGCATTTTTGTATCATGTTCT 57.782 32.000 0.00 0.00 0.00 3.01
691 695 8.334263 TGAGTGCATTTTTGTATCATGTTCTA 57.666 30.769 0.00 0.00 0.00 2.10
692 696 8.236586 TGAGTGCATTTTTGTATCATGTTCTAC 58.763 33.333 0.00 0.00 0.00 2.59
693 697 8.340618 AGTGCATTTTTGTATCATGTTCTACT 57.659 30.769 0.00 0.00 0.00 2.57
694 698 8.796475 AGTGCATTTTTGTATCATGTTCTACTT 58.204 29.630 0.00 0.00 0.00 2.24
779 784 6.470877 TCACTTTACGATTTTGTGCAGAAAAC 59.529 34.615 22.45 15.12 0.00 2.43
780 785 6.472163 CACTTTACGATTTTGTGCAGAAAACT 59.528 34.615 22.45 12.48 0.00 2.66
781 786 7.642194 CACTTTACGATTTTGTGCAGAAAACTA 59.358 33.333 22.45 10.43 0.00 2.24
782 787 7.855904 ACTTTACGATTTTGTGCAGAAAACTAG 59.144 33.333 22.45 17.73 0.00 2.57
791 796 3.433615 GTGCAGAAAACTAGCTACCACTG 59.566 47.826 0.00 0.00 0.00 3.66
883 890 1.603455 CCGGTTGGGCACATGAACT 60.603 57.895 0.00 0.00 0.00 3.01
984 995 2.479002 TGGTCCAATAAGTGGCCCCAT 61.479 52.381 0.00 0.00 45.74 4.00
985 996 3.173630 TGGTCCAATAAGTGGCCCCATA 61.174 50.000 0.00 0.00 45.74 2.74
1009 1020 2.508887 GCGAGCTCAGCCACTCTG 60.509 66.667 15.40 0.00 44.21 3.35
1013 1024 2.125753 GCTCAGCCACTCTGTCCG 60.126 66.667 0.00 0.00 43.32 4.79
1040 1068 0.318529 CGCTCACTCATCCTCATCCG 60.319 60.000 0.00 0.00 0.00 4.18
1273 1336 5.850557 TGATTCCAAGTTTCTTTTGCAGA 57.149 34.783 0.00 0.00 0.00 4.26
1283 1346 2.038659 TCTTTTGCAGAAAACCCCTGG 58.961 47.619 0.00 0.00 32.51 4.45
1372 1435 1.757699 AGAGGCCGAAGAAGATGGTAC 59.242 52.381 0.00 0.00 0.00 3.34
1395 1458 2.435372 TTGAAGGTGCTTTGACTGGT 57.565 45.000 0.00 0.00 0.00 4.00
1476 1539 2.496070 GCTAGTGGAGATGTGTGGTGTA 59.504 50.000 0.00 0.00 0.00 2.90
1492 1555 3.255395 TGGTGTATGATGTGTTTTGCTGG 59.745 43.478 0.00 0.00 0.00 4.85
1659 1775 7.276658 TGAGAACACCTGTTAAATGTGAACTA 58.723 34.615 7.14 0.00 38.56 2.24
1790 1991 9.899226 AGTTTCAAAGAATTATGTTAGCTGAAC 57.101 29.630 0.00 0.00 38.65 3.18
1825 2028 7.739498 TTGAAGTAAACATAGGGTTTCACTC 57.261 36.000 0.00 0.00 46.61 3.51
1837 2040 6.923199 AGGGTTTCACTCAAATGAATTGAT 57.077 33.333 0.00 0.00 46.62 2.57
1892 2194 6.319152 TGTTAGTAAGGTGCTTTGTGCTTAAA 59.681 34.615 0.00 0.00 43.37 1.52
2109 2466 1.946768 TGTCAAACAACTACAGCCAGC 59.053 47.619 0.00 0.00 0.00 4.85
2370 2727 3.108376 AGGGACCTACTTAAGCAAGAGG 58.892 50.000 1.29 7.04 36.20 3.69
2595 2981 5.129485 AGAACCTGAATCAAGACGGTATGAT 59.871 40.000 3.73 3.73 37.88 2.45
2624 3014 9.317827 AGGTACTGTTATGGTTTAAGAACTAGA 57.682 33.333 0.00 0.00 37.18 2.43
2741 3164 7.687941 ACTTTGCATATATTATGTGTAGCCC 57.312 36.000 0.00 0.00 0.00 5.19
2783 3210 6.286240 AGCTAACTGACAGTAATGACATCA 57.714 37.500 8.91 0.00 0.00 3.07
2828 3255 3.813596 CCCATACGAGGCACTTGC 58.186 61.111 0.00 0.00 45.68 4.01
2880 3307 7.724305 TTCACAGTTGTATGTCTTTTCTACC 57.276 36.000 0.00 0.00 0.00 3.18
2888 3315 7.359262 TGTATGTCTTTTCTACCGTTCATTG 57.641 36.000 0.00 0.00 0.00 2.82
2910 3338 6.258230 TGATTTTACAGCATTGACTTCCAG 57.742 37.500 0.00 0.00 0.00 3.86
2911 3339 4.503741 TTTTACAGCATTGACTTCCAGC 57.496 40.909 0.00 0.00 0.00 4.85
2915 3343 2.961062 ACAGCATTGACTTCCAGCTTTT 59.039 40.909 0.00 0.00 32.35 2.27
2960 3388 4.384868 GGGCCTAACTCTAACATTTGGCTA 60.385 45.833 0.84 0.00 43.57 3.93
2979 3407 4.085004 GGCTATGTTCGCTCGTTCTTTATC 60.085 45.833 0.00 0.00 0.00 1.75
3050 3478 3.168528 ACAACCCGACCTGTGCCT 61.169 61.111 0.00 0.00 0.00 4.75
3051 3479 2.358737 CAACCCGACCTGTGCCTC 60.359 66.667 0.00 0.00 0.00 4.70
3092 3520 3.866582 GCCACCTCTCCATCCCCG 61.867 72.222 0.00 0.00 0.00 5.73
3106 3535 0.687757 TCCCCGTTCATCCTCTCCAG 60.688 60.000 0.00 0.00 0.00 3.86
3152 3581 0.686224 CCTCATGCATCCTCTCCTCC 59.314 60.000 0.00 0.00 0.00 4.30
3153 3582 1.421480 CTCATGCATCCTCTCCTCCA 58.579 55.000 0.00 0.00 0.00 3.86
3159 3628 2.430610 ATCCTCTCCTCCACAGCGC 61.431 63.158 0.00 0.00 0.00 5.92
3188 3658 0.107800 CACACATCTGGCCAGAGGAG 60.108 60.000 44.68 39.08 41.37 3.69
3196 3666 2.507324 GCCAGAGGAGAACGCGTC 60.507 66.667 14.44 6.38 0.00 5.19
3212 3682 1.357334 GTCGGCATCTCCTCTCGAC 59.643 63.158 0.00 0.00 42.22 4.20
3216 3686 2.329690 CATCTCCTCTCGACGGCG 59.670 66.667 2.87 2.87 39.35 6.46
3235 3705 2.763710 TGGATAGGCGAGGCTGCA 60.764 61.111 9.55 0.00 36.28 4.41
3281 3772 2.336809 GATCCGCTCGGCCTACTG 59.663 66.667 0.00 0.00 34.68 2.74
3290 3781 2.393768 CGGCCTACTGTTGCTGCTG 61.394 63.158 0.00 0.00 0.00 4.41
3300 3791 3.474486 TTGCTGCTGCCGGAGAACA 62.474 57.895 5.05 0.00 38.71 3.18
3303 3794 1.447489 CTGCTGCCGGAGAACAGAG 60.447 63.158 5.05 0.00 34.20 3.35
3305 3796 2.581354 CTGCCGGAGAACAGAGGG 59.419 66.667 5.05 0.00 34.20 4.30
3308 3799 3.020237 GCCGGAGAACAGAGGGACC 62.020 68.421 5.05 0.00 0.00 4.46
3332 3823 2.433318 GAGTCGAGGTGGTGCTGC 60.433 66.667 0.00 0.00 0.00 5.25
3345 3836 1.151221 TGCTGCCAAGGCTTCAAGA 59.849 52.632 12.96 0.00 42.51 3.02
3350 3841 1.901650 GCCAAGGCTTCAAGACGACG 61.902 60.000 3.29 0.00 38.26 5.12
3351 3842 1.291877 CCAAGGCTTCAAGACGACGG 61.292 60.000 0.00 0.00 0.00 4.79
3366 3857 3.727258 CGGGTGCAGGGGATCCAA 61.727 66.667 15.23 0.00 34.83 3.53
3368 3859 1.311059 GGGTGCAGGGGATCCAATT 59.689 57.895 15.23 0.00 34.83 2.32
3370 3861 1.044790 GGTGCAGGGGATCCAATTGG 61.045 60.000 19.08 19.08 34.83 3.16
3386 3877 2.857186 TTGGTCTGCTGTTGCTGATA 57.143 45.000 1.35 0.00 46.12 2.15
3388 3879 1.339055 TGGTCTGCTGTTGCTGATACC 60.339 52.381 1.35 0.00 46.12 2.73
3398 3889 1.332195 TGCTGATACCGATGGAGGAG 58.668 55.000 0.00 0.00 34.73 3.69
3469 3960 4.861196 AGCTTCTCTAAATCCTTTTCCCC 58.139 43.478 0.00 0.00 0.00 4.81
3471 3962 5.015710 AGCTTCTCTAAATCCTTTTCCCCTT 59.984 40.000 0.00 0.00 0.00 3.95
3596 4099 3.982316 CTGATCGGCAAGCCCAGCA 62.982 63.158 5.34 0.33 0.00 4.41
3627 4130 1.395045 ATTGGGCGAGCGAGATGAGA 61.395 55.000 0.00 0.00 0.00 3.27
3644 4147 2.941583 AGGGGGAAGGAACAGGGC 60.942 66.667 0.00 0.00 0.00 5.19
3645 4148 4.426313 GGGGGAAGGAACAGGGCG 62.426 72.222 0.00 0.00 0.00 6.13
3646 4149 3.647771 GGGGAAGGAACAGGGCGT 61.648 66.667 0.00 0.00 0.00 5.68
3647 4150 2.359975 GGGAAGGAACAGGGCGTG 60.360 66.667 5.50 5.50 0.00 5.34
3648 4151 2.359975 GGAAGGAACAGGGCGTGG 60.360 66.667 12.33 0.00 0.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 130 1.587088 CGCAAAGATTCGGCATGGC 60.587 57.895 9.69 9.69 0.00 4.40
155 159 1.198397 GTTGCGTCGTCGTCACAAG 59.802 57.895 3.66 0.00 39.49 3.16
160 164 1.122849 TTGTTAGTTGCGTCGTCGTC 58.877 50.000 3.66 0.00 39.49 4.20
168 172 1.025812 TGGGTGGTTTGTTAGTTGCG 58.974 50.000 0.00 0.00 0.00 4.85
178 182 7.673926 ACATAGATATGTTTCTTTGGGTGGTTT 59.326 33.333 0.00 0.00 43.99 3.27
202 206 0.325933 TTCCCTCTCCGACTCGTACA 59.674 55.000 0.00 0.00 0.00 2.90
203 207 1.677942 ATTCCCTCTCCGACTCGTAC 58.322 55.000 0.00 0.00 0.00 3.67
204 208 2.295885 GAATTCCCTCTCCGACTCGTA 58.704 52.381 0.00 0.00 0.00 3.43
205 209 1.104630 GAATTCCCTCTCCGACTCGT 58.895 55.000 0.00 0.00 0.00 4.18
206 210 0.029567 CGAATTCCCTCTCCGACTCG 59.970 60.000 0.00 0.00 0.00 4.18
207 211 1.104630 ACGAATTCCCTCTCCGACTC 58.895 55.000 0.00 0.00 0.00 3.36
208 212 1.204941 CAACGAATTCCCTCTCCGACT 59.795 52.381 0.00 0.00 0.00 4.18
209 213 1.641577 CAACGAATTCCCTCTCCGAC 58.358 55.000 0.00 0.00 0.00 4.79
210 214 0.108329 GCAACGAATTCCCTCTCCGA 60.108 55.000 0.00 0.00 0.00 4.55
211 215 1.421410 CGCAACGAATTCCCTCTCCG 61.421 60.000 0.00 0.00 0.00 4.63
212 216 0.108329 TCGCAACGAATTCCCTCTCC 60.108 55.000 0.00 0.00 31.06 3.71
213 217 1.722011 TTCGCAACGAATTCCCTCTC 58.278 50.000 0.00 0.00 41.05 3.20
214 218 3.927555 TTCGCAACGAATTCCCTCT 57.072 47.368 0.00 0.00 41.05 3.69
223 227 0.958382 CCCCTTCCAATTCGCAACGA 60.958 55.000 0.00 0.00 0.00 3.85
224 228 1.506262 CCCCTTCCAATTCGCAACG 59.494 57.895 0.00 0.00 0.00 4.10
225 229 1.890174 CCCCCTTCCAATTCGCAAC 59.110 57.895 0.00 0.00 0.00 4.17
226 230 4.432601 CCCCCTTCCAATTCGCAA 57.567 55.556 0.00 0.00 0.00 4.85
248 252 5.925969 ACCAAAGGAATCGTAGCAAAATTTG 59.074 36.000 0.57 0.57 0.00 2.32
249 253 6.096673 ACCAAAGGAATCGTAGCAAAATTT 57.903 33.333 0.00 0.00 0.00 1.82
250 254 5.722021 ACCAAAGGAATCGTAGCAAAATT 57.278 34.783 0.00 0.00 0.00 1.82
251 255 5.722021 AACCAAAGGAATCGTAGCAAAAT 57.278 34.783 0.00 0.00 0.00 1.82
252 256 5.523438 AAACCAAAGGAATCGTAGCAAAA 57.477 34.783 0.00 0.00 0.00 2.44
253 257 5.523438 AAAACCAAAGGAATCGTAGCAAA 57.477 34.783 0.00 0.00 0.00 3.68
254 258 5.523438 AAAAACCAAAGGAATCGTAGCAA 57.477 34.783 0.00 0.00 0.00 3.91
290 294 8.798153 GGATTTATTAGATCAAAAGCGTGTTTG 58.202 33.333 0.00 6.61 39.41 2.93
291 295 7.973944 GGGATTTATTAGATCAAAAGCGTGTTT 59.026 33.333 0.00 0.00 0.00 2.83
292 296 7.122055 TGGGATTTATTAGATCAAAAGCGTGTT 59.878 33.333 0.00 0.00 0.00 3.32
293 297 6.601613 TGGGATTTATTAGATCAAAAGCGTGT 59.398 34.615 0.00 0.00 0.00 4.49
294 298 7.012327 TCTGGGATTTATTAGATCAAAAGCGTG 59.988 37.037 0.00 0.00 0.00 5.34
295 299 7.054124 TCTGGGATTTATTAGATCAAAAGCGT 58.946 34.615 0.00 0.00 0.00 5.07
296 300 7.496529 TCTGGGATTTATTAGATCAAAAGCG 57.503 36.000 0.00 0.00 0.00 4.68
312 316 9.713684 TCCTACATGATTTTAAAATCTGGGATT 57.286 29.630 31.05 17.34 43.97 3.01
313 317 9.887862 ATCCTACATGATTTTAAAATCTGGGAT 57.112 29.630 31.05 27.82 43.97 3.85
314 318 9.713684 AATCCTACATGATTTTAAAATCTGGGA 57.286 29.630 31.05 27.17 43.97 4.37
322 326 9.189156 CCCTCTCAAATCCTACATGATTTTAAA 57.811 33.333 0.00 0.00 41.74 1.52
323 327 7.285401 GCCCTCTCAAATCCTACATGATTTTAA 59.715 37.037 0.00 0.00 41.74 1.52
324 328 6.772716 GCCCTCTCAAATCCTACATGATTTTA 59.227 38.462 0.00 0.00 41.74 1.52
325 329 5.595952 GCCCTCTCAAATCCTACATGATTTT 59.404 40.000 0.00 0.00 41.74 1.82
326 330 5.136105 GCCCTCTCAAATCCTACATGATTT 58.864 41.667 0.00 0.00 43.84 2.17
327 331 4.166725 TGCCCTCTCAAATCCTACATGATT 59.833 41.667 0.00 0.00 36.53 2.57
328 332 3.718434 TGCCCTCTCAAATCCTACATGAT 59.282 43.478 0.00 0.00 0.00 2.45
329 333 3.114606 TGCCCTCTCAAATCCTACATGA 58.885 45.455 0.00 0.00 0.00 3.07
330 334 3.565764 TGCCCTCTCAAATCCTACATG 57.434 47.619 0.00 0.00 0.00 3.21
331 335 3.749954 GCATGCCCTCTCAAATCCTACAT 60.750 47.826 6.36 0.00 0.00 2.29
332 336 2.421952 GCATGCCCTCTCAAATCCTACA 60.422 50.000 6.36 0.00 0.00 2.74
333 337 2.225467 GCATGCCCTCTCAAATCCTAC 58.775 52.381 6.36 0.00 0.00 3.18
334 338 1.143684 GGCATGCCCTCTCAAATCCTA 59.856 52.381 27.24 0.00 0.00 2.94
335 339 0.106318 GGCATGCCCTCTCAAATCCT 60.106 55.000 27.24 0.00 0.00 3.24
336 340 0.396139 TGGCATGCCCTCTCAAATCC 60.396 55.000 33.44 4.70 34.56 3.01
337 341 0.743097 GTGGCATGCCCTCTCAAATC 59.257 55.000 33.44 5.25 34.56 2.17
338 342 0.333993 AGTGGCATGCCCTCTCAAAT 59.666 50.000 33.44 10.62 31.94 2.32
339 343 0.112995 AAGTGGCATGCCCTCTCAAA 59.887 50.000 33.44 10.68 36.44 2.69
340 344 0.322816 GAAGTGGCATGCCCTCTCAA 60.323 55.000 33.44 11.50 36.44 3.02
341 345 1.300963 GAAGTGGCATGCCCTCTCA 59.699 57.895 33.44 12.33 36.44 3.27
342 346 0.322816 TTGAAGTGGCATGCCCTCTC 60.323 55.000 33.44 24.43 36.44 3.20
343 347 0.333993 ATTGAAGTGGCATGCCCTCT 59.666 50.000 33.44 26.46 39.07 3.69
344 348 1.188863 AATTGAAGTGGCATGCCCTC 58.811 50.000 33.44 25.11 34.56 4.30
345 349 2.530460 TAATTGAAGTGGCATGCCCT 57.470 45.000 33.44 25.36 34.56 5.19
346 350 2.431782 ACATAATTGAAGTGGCATGCCC 59.568 45.455 33.44 23.56 34.56 5.36
347 351 3.119029 ACACATAATTGAAGTGGCATGCC 60.119 43.478 30.54 30.54 37.58 4.40
348 352 4.114058 ACACATAATTGAAGTGGCATGC 57.886 40.909 9.90 9.90 37.58 4.06
349 353 6.869913 AGAAAACACATAATTGAAGTGGCATG 59.130 34.615 10.25 0.00 37.58 4.06
350 354 6.996509 AGAAAACACATAATTGAAGTGGCAT 58.003 32.000 10.25 0.00 37.58 4.40
351 355 6.265196 AGAGAAAACACATAATTGAAGTGGCA 59.735 34.615 10.25 0.00 37.58 4.92
352 356 6.681777 AGAGAAAACACATAATTGAAGTGGC 58.318 36.000 10.25 0.00 37.58 5.01
353 357 7.175641 AGGAGAGAAAACACATAATTGAAGTGG 59.824 37.037 10.25 0.00 37.58 4.00
354 358 8.103948 AGGAGAGAAAACACATAATTGAAGTG 57.896 34.615 5.53 5.53 39.12 3.16
355 359 7.391833 GGAGGAGAGAAAACACATAATTGAAGT 59.608 37.037 0.00 0.00 0.00 3.01
356 360 7.391554 TGGAGGAGAGAAAACACATAATTGAAG 59.608 37.037 0.00 0.00 0.00 3.02
357 361 7.230747 TGGAGGAGAGAAAACACATAATTGAA 58.769 34.615 0.00 0.00 0.00 2.69
358 362 6.778821 TGGAGGAGAGAAAACACATAATTGA 58.221 36.000 0.00 0.00 0.00 2.57
359 363 7.636150 ATGGAGGAGAGAAAACACATAATTG 57.364 36.000 0.00 0.00 0.00 2.32
360 364 8.655935 AAATGGAGGAGAGAAAACACATAATT 57.344 30.769 0.00 0.00 0.00 1.40
361 365 8.526147 CAAAATGGAGGAGAGAAAACACATAAT 58.474 33.333 0.00 0.00 0.00 1.28
362 366 7.723616 TCAAAATGGAGGAGAGAAAACACATAA 59.276 33.333 0.00 0.00 0.00 1.90
363 367 7.230747 TCAAAATGGAGGAGAGAAAACACATA 58.769 34.615 0.00 0.00 0.00 2.29
364 368 6.070656 TCAAAATGGAGGAGAGAAAACACAT 58.929 36.000 0.00 0.00 0.00 3.21
365 369 5.445069 TCAAAATGGAGGAGAGAAAACACA 58.555 37.500 0.00 0.00 0.00 3.72
366 370 5.765182 TCTCAAAATGGAGGAGAGAAAACAC 59.235 40.000 0.00 0.00 35.58 3.32
367 371 5.940617 TCTCAAAATGGAGGAGAGAAAACA 58.059 37.500 0.00 0.00 35.58 2.83
368 372 6.884280 TTCTCAAAATGGAGGAGAGAAAAC 57.116 37.500 0.00 0.00 41.01 2.43
369 373 6.660949 GGATTCTCAAAATGGAGGAGAGAAAA 59.339 38.462 7.19 0.00 45.24 2.29
370 374 6.012157 AGGATTCTCAAAATGGAGGAGAGAAA 60.012 38.462 7.19 0.00 45.24 2.52
371 375 5.490357 AGGATTCTCAAAATGGAGGAGAGAA 59.510 40.000 0.00 0.00 45.89 2.87
372 376 5.035556 AGGATTCTCAAAATGGAGGAGAGA 58.964 41.667 0.00 0.00 38.76 3.10
373 377 5.370875 AGGATTCTCAAAATGGAGGAGAG 57.629 43.478 0.00 0.00 38.76 3.20
374 378 5.131142 GGTAGGATTCTCAAAATGGAGGAGA 59.869 44.000 0.00 0.00 35.98 3.71
375 379 5.104360 TGGTAGGATTCTCAAAATGGAGGAG 60.104 44.000 0.00 0.00 35.58 3.69
376 380 4.788075 TGGTAGGATTCTCAAAATGGAGGA 59.212 41.667 0.00 0.00 35.58 3.71
377 381 5.116084 TGGTAGGATTCTCAAAATGGAGG 57.884 43.478 0.00 0.00 35.58 4.30
378 382 6.830324 TGATTGGTAGGATTCTCAAAATGGAG 59.170 38.462 0.00 0.00 36.21 3.86
379 383 6.730447 TGATTGGTAGGATTCTCAAAATGGA 58.270 36.000 0.00 0.00 0.00 3.41
380 384 7.408756 TTGATTGGTAGGATTCTCAAAATGG 57.591 36.000 0.00 0.00 0.00 3.16
381 385 8.742777 TCTTTGATTGGTAGGATTCTCAAAATG 58.257 33.333 0.00 0.00 33.62 2.32
382 386 8.884124 TCTTTGATTGGTAGGATTCTCAAAAT 57.116 30.769 0.00 0.00 33.62 1.82
383 387 8.163408 TCTCTTTGATTGGTAGGATTCTCAAAA 58.837 33.333 0.00 0.00 33.62 2.44
384 388 7.607991 GTCTCTTTGATTGGTAGGATTCTCAAA 59.392 37.037 0.00 0.00 33.15 2.69
385 389 7.106239 GTCTCTTTGATTGGTAGGATTCTCAA 58.894 38.462 0.00 0.00 0.00 3.02
386 390 6.628175 CGTCTCTTTGATTGGTAGGATTCTCA 60.628 42.308 0.00 0.00 0.00 3.27
387 391 5.751028 CGTCTCTTTGATTGGTAGGATTCTC 59.249 44.000 0.00 0.00 0.00 2.87
388 392 5.187967 ACGTCTCTTTGATTGGTAGGATTCT 59.812 40.000 0.00 0.00 0.00 2.40
389 393 5.420409 ACGTCTCTTTGATTGGTAGGATTC 58.580 41.667 0.00 0.00 0.00 2.52
390 394 5.422214 ACGTCTCTTTGATTGGTAGGATT 57.578 39.130 0.00 0.00 0.00 3.01
391 395 5.422214 AACGTCTCTTTGATTGGTAGGAT 57.578 39.130 0.00 0.00 0.00 3.24
392 396 4.884668 AACGTCTCTTTGATTGGTAGGA 57.115 40.909 0.00 0.00 0.00 2.94
393 397 7.611213 ATTTAACGTCTCTTTGATTGGTAGG 57.389 36.000 0.00 0.00 0.00 3.18
395 399 9.661563 ACATATTTAACGTCTCTTTGATTGGTA 57.338 29.630 0.00 0.00 0.00 3.25
396 400 8.561738 ACATATTTAACGTCTCTTTGATTGGT 57.438 30.769 0.00 0.00 0.00 3.67
397 401 9.490663 GAACATATTTAACGTCTCTTTGATTGG 57.509 33.333 0.00 0.00 0.00 3.16
398 402 9.199184 CGAACATATTTAACGTCTCTTTGATTG 57.801 33.333 0.00 0.00 0.00 2.67
399 403 9.146984 TCGAACATATTTAACGTCTCTTTGATT 57.853 29.630 0.00 0.00 0.00 2.57
400 404 8.592998 GTCGAACATATTTAACGTCTCTTTGAT 58.407 33.333 0.00 0.00 0.00 2.57
401 405 7.201291 CGTCGAACATATTTAACGTCTCTTTGA 60.201 37.037 0.00 0.00 0.00 2.69
402 406 6.887763 CGTCGAACATATTTAACGTCTCTTTG 59.112 38.462 0.00 0.00 0.00 2.77
403 407 6.583806 ACGTCGAACATATTTAACGTCTCTTT 59.416 34.615 0.00 0.00 35.55 2.52
404 408 6.033196 CACGTCGAACATATTTAACGTCTCTT 59.967 38.462 0.00 0.00 37.23 2.85
405 409 5.510674 CACGTCGAACATATTTAACGTCTCT 59.489 40.000 0.00 0.00 37.23 3.10
406 410 5.284660 ACACGTCGAACATATTTAACGTCTC 59.715 40.000 0.00 0.00 37.23 3.36
407 411 5.060077 CACACGTCGAACATATTTAACGTCT 59.940 40.000 0.00 0.00 37.23 4.18
408 412 5.164158 ACACACGTCGAACATATTTAACGTC 60.164 40.000 0.00 0.00 37.23 4.34
409 413 4.681025 ACACACGTCGAACATATTTAACGT 59.319 37.500 0.00 0.00 38.82 3.99
410 414 5.181235 ACACACGTCGAACATATTTAACG 57.819 39.130 0.00 0.00 34.19 3.18
411 415 5.346822 AGGACACACGTCGAACATATTTAAC 59.653 40.000 0.00 0.00 43.61 2.01
412 416 5.472148 AGGACACACGTCGAACATATTTAA 58.528 37.500 0.00 0.00 43.61 1.52
413 417 5.063180 AGGACACACGTCGAACATATTTA 57.937 39.130 0.00 0.00 43.61 1.40
414 418 3.921677 AGGACACACGTCGAACATATTT 58.078 40.909 0.00 0.00 43.61 1.40
415 419 3.587797 AGGACACACGTCGAACATATT 57.412 42.857 0.00 0.00 43.61 1.28
416 420 4.337274 TCATAGGACACACGTCGAACATAT 59.663 41.667 0.00 0.00 43.61 1.78
417 421 3.690628 TCATAGGACACACGTCGAACATA 59.309 43.478 0.00 0.00 43.61 2.29
418 422 2.490509 TCATAGGACACACGTCGAACAT 59.509 45.455 0.00 0.00 43.61 2.71
419 423 1.881324 TCATAGGACACACGTCGAACA 59.119 47.619 0.00 0.00 43.61 3.18
420 424 2.624316 TCATAGGACACACGTCGAAC 57.376 50.000 0.00 0.00 43.61 3.95
421 425 2.490509 ACATCATAGGACACACGTCGAA 59.509 45.455 0.00 0.00 43.61 3.71
422 426 2.089201 ACATCATAGGACACACGTCGA 58.911 47.619 0.00 0.00 43.61 4.20
423 427 2.185262 CACATCATAGGACACACGTCG 58.815 52.381 0.00 0.00 43.61 5.12
424 428 1.927174 GCACATCATAGGACACACGTC 59.073 52.381 0.00 0.00 41.80 4.34
425 429 1.275010 TGCACATCATAGGACACACGT 59.725 47.619 0.00 0.00 0.00 4.49
426 430 2.008752 TGCACATCATAGGACACACG 57.991 50.000 0.00 0.00 0.00 4.49
427 431 4.156556 ACATTTGCACATCATAGGACACAC 59.843 41.667 0.00 0.00 0.00 3.82
428 432 4.156373 CACATTTGCACATCATAGGACACA 59.844 41.667 0.00 0.00 0.00 3.72
429 433 4.156556 ACACATTTGCACATCATAGGACAC 59.843 41.667 0.00 0.00 0.00 3.67
430 434 4.334552 ACACATTTGCACATCATAGGACA 58.665 39.130 0.00 0.00 0.00 4.02
431 435 4.970662 ACACATTTGCACATCATAGGAC 57.029 40.909 0.00 0.00 0.00 3.85
432 436 5.981088 AAACACATTTGCACATCATAGGA 57.019 34.783 0.00 0.00 0.00 2.94
433 437 6.397831 CAAAACACATTTGCACATCATAGG 57.602 37.500 0.00 0.00 41.79 2.57
445 449 5.163468 TGTGATGTACCTGCAAAACACATTT 60.163 36.000 0.00 0.00 33.22 2.32
446 450 4.340666 TGTGATGTACCTGCAAAACACATT 59.659 37.500 0.00 0.00 33.22 2.71
447 451 3.888323 TGTGATGTACCTGCAAAACACAT 59.112 39.130 0.00 3.35 33.22 3.21
448 452 3.282885 TGTGATGTACCTGCAAAACACA 58.717 40.909 0.00 0.00 35.24 3.72
449 453 3.853307 GCTGTGATGTACCTGCAAAACAC 60.853 47.826 0.00 0.00 0.00 3.32
450 454 2.293122 GCTGTGATGTACCTGCAAAACA 59.707 45.455 0.00 0.00 0.00 2.83
451 455 2.554032 AGCTGTGATGTACCTGCAAAAC 59.446 45.455 0.00 0.00 32.46 2.43
452 456 2.862541 AGCTGTGATGTACCTGCAAAA 58.137 42.857 0.00 0.00 32.46 2.44
453 457 2.566833 AGCTGTGATGTACCTGCAAA 57.433 45.000 0.00 0.00 32.46 3.68
454 458 2.566833 AAGCTGTGATGTACCTGCAA 57.433 45.000 0.00 0.00 32.46 4.08
455 459 2.566833 AAAGCTGTGATGTACCTGCA 57.433 45.000 0.00 0.00 32.46 4.41
456 460 4.035675 GGAATAAAGCTGTGATGTACCTGC 59.964 45.833 0.00 0.00 0.00 4.85
457 461 4.271049 CGGAATAAAGCTGTGATGTACCTG 59.729 45.833 0.00 0.00 0.00 4.00
458 462 4.161565 TCGGAATAAAGCTGTGATGTACCT 59.838 41.667 0.00 0.00 0.00 3.08
459 463 4.439057 TCGGAATAAAGCTGTGATGTACC 58.561 43.478 0.00 0.00 0.00 3.34
460 464 6.604735 ATTCGGAATAAAGCTGTGATGTAC 57.395 37.500 0.34 0.00 0.00 2.90
461 465 7.042051 GCTTATTCGGAATAAAGCTGTGATGTA 60.042 37.037 20.30 0.00 33.26 2.29
462 466 6.238484 GCTTATTCGGAATAAAGCTGTGATGT 60.238 38.462 20.30 0.00 33.26 3.06
463 467 6.138761 GCTTATTCGGAATAAAGCTGTGATG 58.861 40.000 20.30 9.39 33.26 3.07
464 468 5.239525 GGCTTATTCGGAATAAAGCTGTGAT 59.760 40.000 25.93 2.66 33.26 3.06
465 469 4.574828 GGCTTATTCGGAATAAAGCTGTGA 59.425 41.667 25.93 8.55 33.26 3.58
466 470 4.335315 TGGCTTATTCGGAATAAAGCTGTG 59.665 41.667 25.93 16.16 33.26 3.66
467 471 4.523083 TGGCTTATTCGGAATAAAGCTGT 58.477 39.130 25.93 0.00 33.26 4.40
468 472 5.296780 TCTTGGCTTATTCGGAATAAAGCTG 59.703 40.000 25.93 20.34 33.26 4.24
469 473 5.297029 GTCTTGGCTTATTCGGAATAAAGCT 59.703 40.000 25.93 5.23 33.26 3.74
470 474 5.297029 AGTCTTGGCTTATTCGGAATAAAGC 59.703 40.000 20.30 21.69 33.26 3.51
471 475 6.763610 AGAGTCTTGGCTTATTCGGAATAAAG 59.236 38.462 20.30 15.46 33.26 1.85
472 476 6.650120 AGAGTCTTGGCTTATTCGGAATAAA 58.350 36.000 20.30 6.88 33.26 1.40
473 477 6.235231 AGAGTCTTGGCTTATTCGGAATAA 57.765 37.500 19.15 19.15 32.70 1.40
474 478 5.871396 AGAGTCTTGGCTTATTCGGAATA 57.129 39.130 6.35 6.35 0.00 1.75
475 479 4.762289 AGAGTCTTGGCTTATTCGGAAT 57.238 40.909 8.49 8.49 0.00 3.01
476 480 4.464951 TGTAGAGTCTTGGCTTATTCGGAA 59.535 41.667 0.00 0.00 0.00 4.30
477 481 4.021229 TGTAGAGTCTTGGCTTATTCGGA 58.979 43.478 0.00 0.00 0.00 4.55
478 482 4.386867 TGTAGAGTCTTGGCTTATTCGG 57.613 45.455 0.00 0.00 0.00 4.30
479 483 6.910536 ATTTGTAGAGTCTTGGCTTATTCG 57.089 37.500 0.00 0.00 0.00 3.34
482 486 9.046296 CGATTAATTTGTAGAGTCTTGGCTTAT 57.954 33.333 0.00 0.00 0.00 1.73
483 487 8.255206 TCGATTAATTTGTAGAGTCTTGGCTTA 58.745 33.333 0.00 0.00 0.00 3.09
484 488 7.103641 TCGATTAATTTGTAGAGTCTTGGCTT 58.896 34.615 0.00 0.00 0.00 4.35
485 489 6.640518 TCGATTAATTTGTAGAGTCTTGGCT 58.359 36.000 0.00 0.00 0.00 4.75
486 490 6.903883 TCGATTAATTTGTAGAGTCTTGGC 57.096 37.500 0.00 0.00 0.00 4.52
487 491 7.391786 CGTTCGATTAATTTGTAGAGTCTTGG 58.608 38.462 0.00 0.00 0.00 3.61
488 492 6.895040 GCGTTCGATTAATTTGTAGAGTCTTG 59.105 38.462 0.00 0.00 0.00 3.02
489 493 6.035758 GGCGTTCGATTAATTTGTAGAGTCTT 59.964 38.462 0.00 0.00 0.00 3.01
490 494 5.519206 GGCGTTCGATTAATTTGTAGAGTCT 59.481 40.000 0.00 0.00 0.00 3.24
491 495 5.290158 TGGCGTTCGATTAATTTGTAGAGTC 59.710 40.000 0.00 0.00 0.00 3.36
492 496 5.063060 GTGGCGTTCGATTAATTTGTAGAGT 59.937 40.000 0.00 0.00 0.00 3.24
493 497 5.062934 TGTGGCGTTCGATTAATTTGTAGAG 59.937 40.000 0.00 0.00 0.00 2.43
494 498 4.930405 TGTGGCGTTCGATTAATTTGTAGA 59.070 37.500 0.00 0.00 0.00 2.59
495 499 5.211266 TGTGGCGTTCGATTAATTTGTAG 57.789 39.130 0.00 0.00 0.00 2.74
496 500 5.608676 TTGTGGCGTTCGATTAATTTGTA 57.391 34.783 0.00 0.00 0.00 2.41
497 501 4.491234 TTGTGGCGTTCGATTAATTTGT 57.509 36.364 0.00 0.00 0.00 2.83
498 502 5.003402 GTGATTGTGGCGTTCGATTAATTTG 59.997 40.000 0.00 0.00 0.00 2.32
499 503 5.092781 GTGATTGTGGCGTTCGATTAATTT 58.907 37.500 0.00 0.00 0.00 1.82
500 504 4.155099 TGTGATTGTGGCGTTCGATTAATT 59.845 37.500 0.00 0.00 0.00 1.40
501 505 3.687212 TGTGATTGTGGCGTTCGATTAAT 59.313 39.130 0.00 0.00 0.00 1.40
502 506 3.067833 TGTGATTGTGGCGTTCGATTAA 58.932 40.909 0.00 0.00 0.00 1.40
503 507 2.689646 TGTGATTGTGGCGTTCGATTA 58.310 42.857 0.00 0.00 0.00 1.75
504 508 1.518325 TGTGATTGTGGCGTTCGATT 58.482 45.000 0.00 0.00 0.00 3.34
505 509 1.464608 CTTGTGATTGTGGCGTTCGAT 59.535 47.619 0.00 0.00 0.00 3.59
506 510 0.865111 CTTGTGATTGTGGCGTTCGA 59.135 50.000 0.00 0.00 0.00 3.71
507 511 0.865111 TCTTGTGATTGTGGCGTTCG 59.135 50.000 0.00 0.00 0.00 3.95
508 512 3.347958 TTTCTTGTGATTGTGGCGTTC 57.652 42.857 0.00 0.00 0.00 3.95
509 513 3.119316 TGTTTTCTTGTGATTGTGGCGTT 60.119 39.130 0.00 0.00 0.00 4.84
510 514 2.425312 TGTTTTCTTGTGATTGTGGCGT 59.575 40.909 0.00 0.00 0.00 5.68
511 515 3.077229 TGTTTTCTTGTGATTGTGGCG 57.923 42.857 0.00 0.00 0.00 5.69
512 516 4.268405 CAGTTGTTTTCTTGTGATTGTGGC 59.732 41.667 0.00 0.00 0.00 5.01
513 517 5.649557 TCAGTTGTTTTCTTGTGATTGTGG 58.350 37.500 0.00 0.00 0.00 4.17
514 518 6.237648 GCTTCAGTTGTTTTCTTGTGATTGTG 60.238 38.462 0.00 0.00 0.00 3.33
515 519 5.807011 GCTTCAGTTGTTTTCTTGTGATTGT 59.193 36.000 0.00 0.00 0.00 2.71
516 520 5.806502 TGCTTCAGTTGTTTTCTTGTGATTG 59.193 36.000 0.00 0.00 0.00 2.67
517 521 5.964758 TGCTTCAGTTGTTTTCTTGTGATT 58.035 33.333 0.00 0.00 0.00 2.57
518 522 5.581126 TGCTTCAGTTGTTTTCTTGTGAT 57.419 34.783 0.00 0.00 0.00 3.06
519 523 5.384063 TTGCTTCAGTTGTTTTCTTGTGA 57.616 34.783 0.00 0.00 0.00 3.58
520 524 6.464895 TTTTGCTTCAGTTGTTTTCTTGTG 57.535 33.333 0.00 0.00 0.00 3.33
521 525 8.770438 TTATTTTGCTTCAGTTGTTTTCTTGT 57.230 26.923 0.00 0.00 0.00 3.16
546 550 8.458843 CGACTCCCAAAGATGTAATTGTATTTT 58.541 33.333 0.00 0.00 0.00 1.82
547 551 7.610305 ACGACTCCCAAAGATGTAATTGTATTT 59.390 33.333 0.00 0.00 0.00 1.40
548 552 7.110155 ACGACTCCCAAAGATGTAATTGTATT 58.890 34.615 0.00 0.00 0.00 1.89
549 553 6.650120 ACGACTCCCAAAGATGTAATTGTAT 58.350 36.000 0.00 0.00 0.00 2.29
550 554 6.045072 ACGACTCCCAAAGATGTAATTGTA 57.955 37.500 0.00 0.00 0.00 2.41
551 555 4.906618 ACGACTCCCAAAGATGTAATTGT 58.093 39.130 0.00 0.00 0.00 2.71
552 556 4.332819 GGACGACTCCCAAAGATGTAATTG 59.667 45.833 0.00 0.00 0.00 2.32
553 557 4.019681 TGGACGACTCCCAAAGATGTAATT 60.020 41.667 0.00 0.00 35.34 1.40
554 558 3.517901 TGGACGACTCCCAAAGATGTAAT 59.482 43.478 0.00 0.00 35.34 1.89
555 559 2.901192 TGGACGACTCCCAAAGATGTAA 59.099 45.455 0.00 0.00 35.34 2.41
556 560 2.531771 TGGACGACTCCCAAAGATGTA 58.468 47.619 0.00 0.00 35.34 2.29
557 561 1.348064 TGGACGACTCCCAAAGATGT 58.652 50.000 0.00 0.00 35.34 3.06
558 562 2.555199 GATGGACGACTCCCAAAGATG 58.445 52.381 0.00 0.00 37.22 2.90
559 563 1.486726 GGATGGACGACTCCCAAAGAT 59.513 52.381 0.00 0.00 37.22 2.40
560 564 0.902531 GGATGGACGACTCCCAAAGA 59.097 55.000 0.00 0.00 37.22 2.52
561 565 0.905357 AGGATGGACGACTCCCAAAG 59.095 55.000 0.00 0.00 37.22 2.77
562 566 0.902531 GAGGATGGACGACTCCCAAA 59.097 55.000 0.00 0.00 37.22 3.28
563 567 0.041238 AGAGGATGGACGACTCCCAA 59.959 55.000 0.00 0.00 37.22 4.12
564 568 0.395862 GAGAGGATGGACGACTCCCA 60.396 60.000 0.00 0.00 35.34 4.37
565 569 1.110518 GGAGAGGATGGACGACTCCC 61.111 65.000 0.00 0.00 40.58 4.30
566 570 0.395862 TGGAGAGGATGGACGACTCC 60.396 60.000 0.00 0.00 44.90 3.85
567 571 0.741915 GTGGAGAGGATGGACGACTC 59.258 60.000 0.00 0.00 0.00 3.36
568 572 0.684805 GGTGGAGAGGATGGACGACT 60.685 60.000 0.00 0.00 0.00 4.18
569 573 0.970937 TGGTGGAGAGGATGGACGAC 60.971 60.000 0.00 0.00 0.00 4.34
570 574 0.970937 GTGGTGGAGAGGATGGACGA 60.971 60.000 0.00 0.00 0.00 4.20
571 575 1.517832 GTGGTGGAGAGGATGGACG 59.482 63.158 0.00 0.00 0.00 4.79
572 576 1.627297 GGGTGGTGGAGAGGATGGAC 61.627 65.000 0.00 0.00 0.00 4.02
573 577 1.306997 GGGTGGTGGAGAGGATGGA 60.307 63.158 0.00 0.00 0.00 3.41
574 578 1.616327 TGGGTGGTGGAGAGGATGG 60.616 63.158 0.00 0.00 0.00 3.51
575 579 1.200760 TGTGGGTGGTGGAGAGGATG 61.201 60.000 0.00 0.00 0.00 3.51
576 580 0.253347 ATGTGGGTGGTGGAGAGGAT 60.253 55.000 0.00 0.00 0.00 3.24
577 581 0.415830 TATGTGGGTGGTGGAGAGGA 59.584 55.000 0.00 0.00 0.00 3.71
578 582 0.541863 GTATGTGGGTGGTGGAGAGG 59.458 60.000 0.00 0.00 0.00 3.69
579 583 0.541863 GGTATGTGGGTGGTGGAGAG 59.458 60.000 0.00 0.00 0.00 3.20
580 584 1.261938 CGGTATGTGGGTGGTGGAGA 61.262 60.000 0.00 0.00 0.00 3.71
581 585 1.220749 CGGTATGTGGGTGGTGGAG 59.779 63.158 0.00 0.00 0.00 3.86
582 586 0.619255 ATCGGTATGTGGGTGGTGGA 60.619 55.000 0.00 0.00 0.00 4.02
583 587 0.463654 CATCGGTATGTGGGTGGTGG 60.464 60.000 0.00 0.00 0.00 4.61
584 588 0.539518 TCATCGGTATGTGGGTGGTG 59.460 55.000 0.00 0.00 34.50 4.17
585 589 0.539986 GTCATCGGTATGTGGGTGGT 59.460 55.000 0.00 0.00 34.50 4.16
586 590 0.529773 CGTCATCGGTATGTGGGTGG 60.530 60.000 0.00 0.00 34.50 4.61
587 591 0.174845 ACGTCATCGGTATGTGGGTG 59.825 55.000 0.00 0.00 41.85 4.61
588 592 0.174845 CACGTCATCGGTATGTGGGT 59.825 55.000 0.00 0.00 41.85 4.51
589 593 0.174845 ACACGTCATCGGTATGTGGG 59.825 55.000 8.91 0.00 41.85 4.61
590 594 1.135228 TGACACGTCATCGGTATGTGG 60.135 52.381 0.00 0.00 41.85 4.17
591 595 2.271821 TGACACGTCATCGGTATGTG 57.728 50.000 0.00 0.00 41.85 3.21
592 596 3.250744 CTTTGACACGTCATCGGTATGT 58.749 45.455 0.00 0.00 39.64 2.29
593 597 3.250744 ACTTTGACACGTCATCGGTATG 58.749 45.455 0.00 0.00 39.64 2.39
594 598 3.587797 ACTTTGACACGTCATCGGTAT 57.412 42.857 0.00 0.00 39.64 2.73
595 599 3.054166 CAACTTTGACACGTCATCGGTA 58.946 45.455 0.00 0.00 39.64 4.02
596 600 1.864711 CAACTTTGACACGTCATCGGT 59.135 47.619 0.00 0.00 39.64 4.69
597 601 1.398451 GCAACTTTGACACGTCATCGG 60.398 52.381 0.00 0.00 39.64 4.18
598 602 1.398451 GGCAACTTTGACACGTCATCG 60.398 52.381 0.00 0.00 39.64 3.84
599 603 1.398451 CGGCAACTTTGACACGTCATC 60.398 52.381 0.00 0.00 39.64 2.92
600 604 0.586319 CGGCAACTTTGACACGTCAT 59.414 50.000 0.00 0.00 39.64 3.06
601 605 2.010670 CGGCAACTTTGACACGTCA 58.989 52.632 0.00 0.00 35.35 4.35
602 606 1.368850 GCGGCAACTTTGACACGTC 60.369 57.895 0.00 0.00 35.35 4.34
603 607 2.713154 GCGGCAACTTTGACACGT 59.287 55.556 0.00 0.00 35.35 4.49
604 608 2.051345 GGCGGCAACTTTGACACG 60.051 61.111 3.07 0.00 35.35 4.49
605 609 1.166531 AGAGGCGGCAACTTTGACAC 61.167 55.000 13.08 0.00 35.35 3.67
606 610 0.394938 TAGAGGCGGCAACTTTGACA 59.605 50.000 13.08 0.00 35.35 3.58
607 611 1.079503 CTAGAGGCGGCAACTTTGAC 58.920 55.000 13.08 0.00 0.00 3.18
608 612 0.973632 TCTAGAGGCGGCAACTTTGA 59.026 50.000 13.08 9.13 0.00 2.69
609 613 1.338200 ACTCTAGAGGCGGCAACTTTG 60.338 52.381 23.50 7.07 0.00 2.77
610 614 0.977395 ACTCTAGAGGCGGCAACTTT 59.023 50.000 23.50 0.00 0.00 2.66
611 615 0.977395 AACTCTAGAGGCGGCAACTT 59.023 50.000 23.50 3.57 0.00 2.66
612 616 0.533032 GAACTCTAGAGGCGGCAACT 59.467 55.000 23.50 12.72 0.00 3.16
613 617 0.246635 TGAACTCTAGAGGCGGCAAC 59.753 55.000 23.50 4.75 0.00 4.17
614 618 0.532573 CTGAACTCTAGAGGCGGCAA 59.467 55.000 23.50 2.69 0.00 4.52
615 619 1.949847 GCTGAACTCTAGAGGCGGCA 61.950 60.000 29.19 18.54 38.36 5.69
616 620 1.227118 GCTGAACTCTAGAGGCGGC 60.227 63.158 24.07 24.07 34.05 6.53
617 621 1.064946 CGCTGAACTCTAGAGGCGG 59.935 63.158 24.74 20.26 39.12 6.13
618 622 1.587613 GCGCTGAACTCTAGAGGCG 60.588 63.158 26.82 26.82 44.40 5.52
619 623 1.227118 GGCGCTGAACTCTAGAGGC 60.227 63.158 23.50 15.33 33.89 4.70
620 624 0.179124 GTGGCGCTGAACTCTAGAGG 60.179 60.000 23.50 7.01 0.00 3.69
621 625 0.814457 AGTGGCGCTGAACTCTAGAG 59.186 55.000 18.49 18.49 0.00 2.43
622 626 2.962882 AGTGGCGCTGAACTCTAGA 58.037 52.632 7.64 0.00 0.00 2.43
635 639 2.124736 TATTGCTCCGCCAGTGGC 60.125 61.111 25.07 25.07 46.75 5.01
636 640 0.107703 TTCTATTGCTCCGCCAGTGG 60.108 55.000 4.20 4.20 0.00 4.00
637 641 1.959042 ATTCTATTGCTCCGCCAGTG 58.041 50.000 0.00 0.00 0.00 3.66
638 642 3.838244 TTATTCTATTGCTCCGCCAGT 57.162 42.857 0.00 0.00 0.00 4.00
639 643 6.344500 AGATATTATTCTATTGCTCCGCCAG 58.656 40.000 0.00 0.00 0.00 4.85
640 644 6.299805 AGATATTATTCTATTGCTCCGCCA 57.700 37.500 0.00 0.00 0.00 5.69
641 645 8.768955 CATAAGATATTATTCTATTGCTCCGCC 58.231 37.037 0.00 0.00 0.00 6.13
642 646 9.534565 TCATAAGATATTATTCTATTGCTCCGC 57.465 33.333 0.00 0.00 0.00 5.54
660 664 9.961265 CATGATACAAAAATGCACTCATAAGAT 57.039 29.630 0.00 0.00 31.46 2.40
661 665 8.959548 ACATGATACAAAAATGCACTCATAAGA 58.040 29.630 0.00 0.00 31.46 2.10
662 666 9.577110 AACATGATACAAAAATGCACTCATAAG 57.423 29.630 0.00 0.00 31.46 1.73
663 667 9.571810 GAACATGATACAAAAATGCACTCATAA 57.428 29.630 0.00 0.00 31.46 1.90
664 668 8.959548 AGAACATGATACAAAAATGCACTCATA 58.040 29.630 0.00 0.00 31.46 2.15
665 669 7.833786 AGAACATGATACAAAAATGCACTCAT 58.166 30.769 0.00 0.00 33.53 2.90
666 670 7.218228 AGAACATGATACAAAAATGCACTCA 57.782 32.000 0.00 0.00 0.00 3.41
667 671 8.454106 AGTAGAACATGATACAAAAATGCACTC 58.546 33.333 0.00 0.00 0.00 3.51
668 672 8.340618 AGTAGAACATGATACAAAAATGCACT 57.659 30.769 0.00 0.00 0.00 4.40
669 673 8.970691 AAGTAGAACATGATACAAAAATGCAC 57.029 30.769 0.00 0.00 0.00 4.57
678 682 9.478768 TCAAAACGTTAAGTAGAACATGATACA 57.521 29.630 0.00 0.00 0.00 2.29
679 683 9.953825 CTCAAAACGTTAAGTAGAACATGATAC 57.046 33.333 0.00 0.00 0.00 2.24
680 684 9.701098 ACTCAAAACGTTAAGTAGAACATGATA 57.299 29.630 0.00 0.00 0.00 2.15
681 685 8.603242 ACTCAAAACGTTAAGTAGAACATGAT 57.397 30.769 0.00 0.00 0.00 2.45
682 686 9.701098 ATACTCAAAACGTTAAGTAGAACATGA 57.299 29.630 17.65 5.02 0.00 3.07
779 784 6.049790 GGATTAGGAAAACAGTGGTAGCTAG 58.950 44.000 0.00 0.00 0.00 3.42
780 785 5.394883 CGGATTAGGAAAACAGTGGTAGCTA 60.395 44.000 0.00 0.00 0.00 3.32
781 786 4.623171 CGGATTAGGAAAACAGTGGTAGCT 60.623 45.833 0.00 0.00 0.00 3.32
782 787 3.621715 CGGATTAGGAAAACAGTGGTAGC 59.378 47.826 0.00 0.00 0.00 3.58
791 796 3.926821 TTTGCCACGGATTAGGAAAAC 57.073 42.857 0.00 0.00 27.27 2.43
875 882 0.036388 CGGTGGCACCTAGTTCATGT 60.036 55.000 32.28 0.00 35.66 3.21
953 964 2.593468 ATTGGACCATCGACAGCCGG 62.593 60.000 0.00 0.00 39.14 6.13
984 995 1.380403 GGCTGAGCTCGCTCTCACTA 61.380 60.000 23.23 0.00 43.12 2.74
985 996 2.709883 GGCTGAGCTCGCTCTCACT 61.710 63.158 23.23 0.00 43.12 3.41
1013 1024 3.423162 ATGAGTGAGCGAGCGAGGC 62.423 63.158 0.00 0.00 0.00 4.70
1040 1068 3.791586 GCACCAGGGAGAGGGAGC 61.792 72.222 0.00 0.00 33.74 4.70
1097 1134 3.135530 GGATGGCATCCTCAAGTTCTACT 59.864 47.826 34.15 0.00 46.19 2.57
1273 1336 1.457455 CCACACTGCCAGGGGTTTT 60.457 57.895 0.00 0.00 0.00 2.43
1476 1539 2.559668 CTCCACCAGCAAAACACATCAT 59.440 45.455 0.00 0.00 0.00 2.45
1492 1555 1.580845 GCTGCACCACACATCTCCAC 61.581 60.000 0.00 0.00 0.00 4.02
1790 1991 6.981762 ATGTTTACTTCAATGCTCTCTGAG 57.018 37.500 0.00 0.00 0.00 3.35
1905 2207 5.071788 AGTTGACACCTTCATCCTACAGAAA 59.928 40.000 0.00 0.00 32.84 2.52
2370 2727 5.789643 ATCAGATACTCCAGCTTCTTCTC 57.210 43.478 0.00 0.00 0.00 2.87
2587 2973 5.470368 CATAACAGTACCTCCATCATACCG 58.530 45.833 0.00 0.00 0.00 4.02
2595 2981 6.938698 TCTTAAACCATAACAGTACCTCCA 57.061 37.500 0.00 0.00 0.00 3.86
2646 3037 8.714906 AGCATAGTAGGTCCTAACATAAACATT 58.285 33.333 0.00 0.00 0.00 2.71
2648 3039 7.670605 AGCATAGTAGGTCCTAACATAAACA 57.329 36.000 0.00 0.00 0.00 2.83
2649 3040 9.694137 CTTAGCATAGTAGGTCCTAACATAAAC 57.306 37.037 0.00 0.00 0.00 2.01
2659 3050 8.911965 ACTTACTTAACTTAGCATAGTAGGTCC 58.088 37.037 0.00 0.00 29.10 4.46
2783 3210 4.581868 TGCCTAGCGTTGTTTATAGGTTT 58.418 39.130 0.00 0.00 37.66 3.27
2834 3261 3.730761 GCGGACCACAAGCAGCAG 61.731 66.667 0.00 0.00 0.00 4.24
2880 3307 6.803320 AGTCAATGCTGTAAAATCAATGAACG 59.197 34.615 0.00 0.00 0.00 3.95
2888 3315 5.098211 GCTGGAAGTCAATGCTGTAAAATC 58.902 41.667 0.00 0.00 35.30 2.17
2910 3338 5.488341 TGTCATTCACCTCCTAGTAAAAGC 58.512 41.667 0.00 0.00 0.00 3.51
2911 3339 6.936279 TCTGTCATTCACCTCCTAGTAAAAG 58.064 40.000 0.00 0.00 0.00 2.27
2915 3343 4.895889 CCATCTGTCATTCACCTCCTAGTA 59.104 45.833 0.00 0.00 0.00 1.82
2960 3388 3.766151 TCGATAAAGAACGAGCGAACAT 58.234 40.909 0.00 0.00 34.49 2.71
2964 3392 2.356695 TGGATCGATAAAGAACGAGCGA 59.643 45.455 0.00 0.00 44.08 4.93
2979 3407 4.024556 GCTGAAAATCATACCACTGGATCG 60.025 45.833 0.71 0.00 0.00 3.69
3018 3446 1.005450 GGTTGTGCCCTCCTTCCAATA 59.995 52.381 0.00 0.00 0.00 1.90
3046 3474 3.695606 GAGAGTGGTGGCGAGGCA 61.696 66.667 0.00 0.00 0.00 4.75
3050 3478 2.680352 GAGGGAGAGTGGTGGCGA 60.680 66.667 0.00 0.00 0.00 5.54
3051 3479 2.681778 AGAGGGAGAGTGGTGGCG 60.682 66.667 0.00 0.00 0.00 5.69
3055 3483 1.379309 GCGAGAGAGGGAGAGTGGT 60.379 63.158 0.00 0.00 0.00 4.16
3086 3514 0.031111 TGGAGAGGATGAACGGGGAT 60.031 55.000 0.00 0.00 0.00 3.85
3092 3520 0.463474 GGCAGCTGGAGAGGATGAAC 60.463 60.000 17.12 0.00 0.00 3.18
3114 3543 3.775654 GGAGAGACAGGGGTGGCG 61.776 72.222 0.00 0.00 0.00 5.69
3152 3581 4.465512 GTTGCATCCCGCGCTGTG 62.466 66.667 5.56 0.00 46.97 3.66
3159 3628 0.448990 CAGATGTGTGTTGCATCCCG 59.551 55.000 0.00 0.00 42.58 5.14
3167 3636 0.037303 CCTCTGGCCAGATGTGTGTT 59.963 55.000 35.11 0.00 36.76 3.32
3188 3658 3.255379 GGAGATGCCGACGCGTTC 61.255 66.667 15.53 6.47 38.08 3.95
3196 3666 2.329690 CGTCGAGAGGAGATGCCG 59.670 66.667 0.00 0.00 43.43 5.69
3212 3682 4.647615 CTCGCCTATCCACCGCCG 62.648 72.222 0.00 0.00 0.00 6.46
3216 3686 2.423446 CAGCCTCGCCTATCCACC 59.577 66.667 0.00 0.00 0.00 4.61
3281 3772 2.669569 TTCTCCGGCAGCAGCAAC 60.670 61.111 2.65 0.00 44.61 4.17
3290 3781 2.579738 GTCCCTCTGTTCTCCGGC 59.420 66.667 0.00 0.00 0.00 6.13
3300 3791 2.124487 CTCGAGAGCGGTCCCTCT 60.124 66.667 6.58 9.04 44.57 3.69
3303 3794 3.878519 CGACTCGAGAGCGGTCCC 61.879 72.222 21.68 0.00 35.61 4.46
3332 3823 1.291877 CCGTCGTCTTGAAGCCTTGG 61.292 60.000 0.00 0.00 0.00 3.61
3340 3831 2.338620 CTGCACCCGTCGTCTTGA 59.661 61.111 0.00 0.00 0.00 3.02
3350 3841 1.044790 CAATTGGATCCCCTGCACCC 61.045 60.000 9.90 0.00 0.00 4.61
3351 3842 1.044790 CCAATTGGATCCCCTGCACC 61.045 60.000 20.50 0.00 37.39 5.01
3365 3856 1.985473 TCAGCAACAGCAGACCAATT 58.015 45.000 0.00 0.00 0.00 2.32
3366 3857 2.211250 ATCAGCAACAGCAGACCAAT 57.789 45.000 0.00 0.00 0.00 3.16
3368 3859 1.339055 GGTATCAGCAACAGCAGACCA 60.339 52.381 0.00 0.00 0.00 4.02
3370 3861 1.002366 CGGTATCAGCAACAGCAGAC 58.998 55.000 0.00 0.00 0.00 3.51
3386 3877 3.083997 GCCACCTCCTCCATCGGT 61.084 66.667 0.00 0.00 0.00 4.69
3388 3879 3.866582 GGGCCACCTCCTCCATCG 61.867 72.222 4.39 0.00 0.00 3.84
3398 3889 3.775654 CGACCTGAGAGGGCCACC 61.776 72.222 6.18 0.00 41.74 4.61
3433 3924 0.737219 GAAGCTCACCATGGCATCAC 59.263 55.000 13.04 0.00 0.00 3.06
3469 3960 5.142639 AGAGAGAGAGATCAGGATGGAAAG 58.857 45.833 0.00 0.00 36.16 2.62
3471 3962 4.416513 AGAGAGAGAGAGATCAGGATGGAA 59.583 45.833 0.00 0.00 36.16 3.53
3572 4075 0.678048 GGCTTGCCGATCAGAGGTTT 60.678 55.000 0.00 0.00 0.00 3.27
3599 4102 1.453928 CTCGCCCAATTCCTTCCCC 60.454 63.158 0.00 0.00 0.00 4.81
3614 4117 2.560119 CCCCCTCTCATCTCGCTCG 61.560 68.421 0.00 0.00 0.00 5.03
3627 4130 2.941583 GCCCTGTTCCTTCCCCCT 60.942 66.667 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.