Multiple sequence alignment - TraesCS2B01G449900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G449900 chr2B 100.000 4511 0 0 1 4511 643180910 643185420 0.000000e+00 8331
1 TraesCS2B01G449900 chr2A 95.844 3128 105 15 601 3710 682551438 682554558 0.000000e+00 5033
2 TraesCS2B01G449900 chr2A 92.017 689 38 8 3824 4511 682554556 682555228 0.000000e+00 952
3 TraesCS2B01G449900 chr2A 85.378 595 66 8 3878 4465 136973815 136973235 8.350000e-167 597
4 TraesCS2B01G449900 chr2A 96.694 121 4 0 3706 3826 78845569 78845689 7.650000e-48 202
5 TraesCS2B01G449900 chr2D 93.106 3220 181 21 512 3710 539258822 539262021 0.000000e+00 4678
6 TraesCS2B01G449900 chr2D 87.572 692 59 11 3824 4511 539262019 539262687 0.000000e+00 776
7 TraesCS2B01G449900 chr4A 85.738 596 68 7 3878 4465 35188687 35188101 8.290000e-172 614
8 TraesCS2B01G449900 chrUn 85.049 515 66 4 3960 4465 155289039 155288527 8.650000e-142 514
9 TraesCS2B01G449900 chr6B 85.049 515 66 4 3960 4465 246390651 246390139 8.650000e-142 514
10 TraesCS2B01G449900 chr6B 84.854 515 67 5 3960 4465 246695726 246695214 4.030000e-140 508
11 TraesCS2B01G449900 chr6B 84.660 515 67 5 3960 4465 246540785 246540274 1.870000e-138 503
12 TraesCS2B01G449900 chr6B 96.774 62 1 1 445 506 66782902 66782962 7.980000e-18 102
13 TraesCS2B01G449900 chr6B 96.721 61 1 1 445 505 66752336 66752395 2.870000e-17 100
14 TraesCS2B01G449900 chr7A 96.800 125 4 0 3702 3826 105313727 105313851 4.570000e-50 209
15 TraesCS2B01G449900 chr3B 96.748 123 4 0 3704 3826 70295987 70295865 5.920000e-49 206
16 TraesCS2B01G449900 chr3B 88.148 135 14 2 4364 4498 811775984 811776116 4.670000e-35 159
17 TraesCS2B01G449900 chr7B 93.985 133 6 2 3706 3836 81425110 81424978 2.750000e-47 200
18 TraesCS2B01G449900 chr6A 95.238 126 6 0 3701 3826 147303785 147303660 2.750000e-47 200
19 TraesCS2B01G449900 chr5D 95.276 127 4 2 3704 3829 2138698 2138573 2.750000e-47 200
20 TraesCS2B01G449900 chr5D 94.615 130 6 1 3708 3836 461071642 461071771 2.750000e-47 200
21 TraesCS2B01G449900 chr4D 94.615 130 5 2 3708 3837 367720769 367720896 2.750000e-47 200
22 TraesCS2B01G449900 chr1D 95.276 127 5 1 3709 3834 116548457 116548331 2.750000e-47 200
23 TraesCS2B01G449900 chr5A 92.958 71 4 1 436 505 548433790 548433860 7.980000e-18 102


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G449900 chr2B 643180910 643185420 4510 False 8331.0 8331 100.0000 1 4511 1 chr2B.!!$F1 4510
1 TraesCS2B01G449900 chr2A 682551438 682555228 3790 False 2992.5 5033 93.9305 601 4511 2 chr2A.!!$F2 3910
2 TraesCS2B01G449900 chr2A 136973235 136973815 580 True 597.0 597 85.3780 3878 4465 1 chr2A.!!$R1 587
3 TraesCS2B01G449900 chr2D 539258822 539262687 3865 False 2727.0 4678 90.3390 512 4511 2 chr2D.!!$F1 3999
4 TraesCS2B01G449900 chr4A 35188101 35188687 586 True 614.0 614 85.7380 3878 4465 1 chr4A.!!$R1 587
5 TraesCS2B01G449900 chrUn 155288527 155289039 512 True 514.0 514 85.0490 3960 4465 1 chrUn.!!$R1 505
6 TraesCS2B01G449900 chr6B 246390139 246390651 512 True 514.0 514 85.0490 3960 4465 1 chr6B.!!$R1 505
7 TraesCS2B01G449900 chr6B 246695214 246695726 512 True 508.0 508 84.8540 3960 4465 1 chr6B.!!$R3 505
8 TraesCS2B01G449900 chr6B 246540274 246540785 511 True 503.0 503 84.6600 3960 4465 1 chr6B.!!$R2 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
429 430 0.032017 ACGGCCCTCCTGACTCTATT 60.032 55.0 0.0 0.0 0.0 1.73 F
1494 1513 0.037326 TCGGTGTGAATCTGGCTGAC 60.037 55.0 0.0 0.0 0.0 3.51 F
2112 2131 0.912487 ACCGGCAACCTAATCTGGGA 60.912 55.0 0.0 0.0 0.0 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1545 1564 0.034337 TGTCGGTAGGGTGCTCAAAC 59.966 55.0 0.0 0.0 0.00 2.93 R
2511 2530 1.201429 ACGGGTCCTCCTCTTGCATT 61.201 55.0 0.0 0.0 0.00 3.56 R
3804 3832 0.108756 CTCCCTCCGTCCGAGAAAAC 60.109 60.0 0.0 0.0 41.63 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 126 8.716646 AAAAACCATAAAAACCAGTGAGAAAG 57.283 30.769 0.00 0.00 0.00 2.62
126 127 7.654022 AAACCATAAAAACCAGTGAGAAAGA 57.346 32.000 0.00 0.00 0.00 2.52
127 128 7.839680 AACCATAAAAACCAGTGAGAAAGAT 57.160 32.000 0.00 0.00 0.00 2.40
128 129 7.839680 ACCATAAAAACCAGTGAGAAAGATT 57.160 32.000 0.00 0.00 0.00 2.40
129 130 8.250143 ACCATAAAAACCAGTGAGAAAGATTT 57.750 30.769 0.00 0.00 0.00 2.17
130 131 8.704668 ACCATAAAAACCAGTGAGAAAGATTTT 58.295 29.630 0.00 0.00 0.00 1.82
131 132 9.546428 CCATAAAAACCAGTGAGAAAGATTTTT 57.454 29.630 0.00 0.00 33.62 1.94
150 151 5.881637 TTTTTCAAATTGTTCGCTGCTAC 57.118 34.783 0.00 0.00 0.00 3.58
151 152 3.552604 TTCAAATTGTTCGCTGCTACC 57.447 42.857 0.00 0.00 0.00 3.18
152 153 2.499197 TCAAATTGTTCGCTGCTACCA 58.501 42.857 0.00 0.00 0.00 3.25
153 154 2.225491 TCAAATTGTTCGCTGCTACCAC 59.775 45.455 0.00 0.00 0.00 4.16
154 155 2.185004 AATTGTTCGCTGCTACCACT 57.815 45.000 0.00 0.00 0.00 4.00
155 156 2.185004 ATTGTTCGCTGCTACCACTT 57.815 45.000 0.00 0.00 0.00 3.16
156 157 1.225855 TTGTTCGCTGCTACCACTTG 58.774 50.000 0.00 0.00 0.00 3.16
157 158 0.105964 TGTTCGCTGCTACCACTTGT 59.894 50.000 0.00 0.00 0.00 3.16
158 159 1.341852 TGTTCGCTGCTACCACTTGTA 59.658 47.619 0.00 0.00 0.00 2.41
160 161 0.530744 TCGCTGCTACCACTTGTAGG 59.469 55.000 0.00 0.00 45.97 3.18
161 162 1.084370 CGCTGCTACCACTTGTAGGC 61.084 60.000 0.00 0.00 45.97 3.93
162 163 0.250513 GCTGCTACCACTTGTAGGCT 59.749 55.000 0.00 0.00 45.97 4.58
163 164 1.740718 GCTGCTACCACTTGTAGGCTC 60.741 57.143 0.00 0.00 45.97 4.70
164 165 1.827969 CTGCTACCACTTGTAGGCTCT 59.172 52.381 0.00 0.00 45.97 4.09
165 166 3.024547 CTGCTACCACTTGTAGGCTCTA 58.975 50.000 0.00 0.00 45.97 2.43
166 167 3.437213 TGCTACCACTTGTAGGCTCTAA 58.563 45.455 0.00 0.00 45.97 2.10
167 168 4.030913 TGCTACCACTTGTAGGCTCTAAT 58.969 43.478 0.00 0.00 45.97 1.73
168 169 4.141937 TGCTACCACTTGTAGGCTCTAATG 60.142 45.833 0.00 0.00 45.97 1.90
169 170 3.914426 ACCACTTGTAGGCTCTAATGG 57.086 47.619 0.00 0.00 0.00 3.16
170 171 2.505819 ACCACTTGTAGGCTCTAATGGG 59.494 50.000 0.00 0.00 0.00 4.00
171 172 2.158755 CCACTTGTAGGCTCTAATGGGG 60.159 54.545 0.00 0.00 0.00 4.96
172 173 1.490910 ACTTGTAGGCTCTAATGGGGC 59.509 52.381 0.00 0.00 0.00 5.80
173 174 0.843984 TTGTAGGCTCTAATGGGGCC 59.156 55.000 0.00 0.00 45.57 5.80
176 177 4.956932 GGCTCTAATGGGGCCGGC 62.957 72.222 21.18 21.18 36.37 6.13
177 178 4.956932 GCTCTAATGGGGCCGGCC 62.957 72.222 38.57 38.57 0.00 6.13
187 188 2.822701 GGCCGGCCCGAAAAGTAG 60.823 66.667 36.64 0.00 0.00 2.57
188 189 3.506096 GCCGGCCCGAAAAGTAGC 61.506 66.667 18.11 0.00 0.00 3.58
189 190 2.046700 CCGGCCCGAAAAGTAGCA 60.047 61.111 3.71 0.00 0.00 3.49
190 191 2.396157 CCGGCCCGAAAAGTAGCAC 61.396 63.158 3.71 0.00 0.00 4.40
191 192 2.396157 CGGCCCGAAAAGTAGCACC 61.396 63.158 0.00 0.00 0.00 5.01
192 193 1.002502 GGCCCGAAAAGTAGCACCT 60.003 57.895 0.00 0.00 0.00 4.00
193 194 1.305930 GGCCCGAAAAGTAGCACCTG 61.306 60.000 0.00 0.00 0.00 4.00
194 195 0.605589 GCCCGAAAAGTAGCACCTGT 60.606 55.000 0.00 0.00 0.00 4.00
195 196 1.156736 CCCGAAAAGTAGCACCTGTG 58.843 55.000 0.00 0.00 0.00 3.66
196 197 1.542547 CCCGAAAAGTAGCACCTGTGT 60.543 52.381 0.00 0.00 0.00 3.72
197 198 1.531149 CCGAAAAGTAGCACCTGTGTG 59.469 52.381 0.00 0.00 45.65 3.82
198 199 2.210116 CGAAAAGTAGCACCTGTGTGT 58.790 47.619 0.00 0.00 44.65 3.72
199 200 2.032894 CGAAAAGTAGCACCTGTGTGTG 60.033 50.000 0.00 0.00 44.65 3.82
200 201 3.202906 GAAAAGTAGCACCTGTGTGTGA 58.797 45.455 0.00 0.00 44.65 3.58
201 202 2.533266 AAGTAGCACCTGTGTGTGAG 57.467 50.000 0.00 0.00 44.65 3.51
202 203 0.034059 AGTAGCACCTGTGTGTGAGC 59.966 55.000 0.00 0.00 44.65 4.26
203 204 1.006220 TAGCACCTGTGTGTGAGCG 60.006 57.895 0.00 0.00 44.65 5.03
204 205 1.460273 TAGCACCTGTGTGTGAGCGA 61.460 55.000 0.00 0.00 44.65 4.93
205 206 1.669115 GCACCTGTGTGTGAGCGAT 60.669 57.895 0.00 0.00 44.65 4.58
206 207 1.630244 GCACCTGTGTGTGAGCGATC 61.630 60.000 0.00 0.00 44.65 3.69
207 208 0.319813 CACCTGTGTGTGAGCGATCA 60.320 55.000 0.00 0.00 38.55 2.92
208 209 0.392706 ACCTGTGTGTGAGCGATCAA 59.607 50.000 4.22 0.00 0.00 2.57
209 210 0.792640 CCTGTGTGTGAGCGATCAAC 59.207 55.000 4.22 6.98 0.00 3.18
210 211 1.501169 CTGTGTGTGAGCGATCAACA 58.499 50.000 4.22 9.67 0.00 3.33
211 212 1.866601 CTGTGTGTGAGCGATCAACAA 59.133 47.619 4.22 3.54 0.00 2.83
212 213 1.597195 TGTGTGTGAGCGATCAACAAC 59.403 47.619 4.22 5.15 0.00 3.32
213 214 1.069906 GTGTGTGAGCGATCAACAACC 60.070 52.381 4.22 0.00 0.00 3.77
214 215 1.202639 TGTGTGAGCGATCAACAACCT 60.203 47.619 4.22 0.00 0.00 3.50
215 216 2.036604 TGTGTGAGCGATCAACAACCTA 59.963 45.455 4.22 0.00 0.00 3.08
216 217 2.668457 GTGTGAGCGATCAACAACCTAG 59.332 50.000 4.22 0.00 0.00 3.02
217 218 1.661112 GTGAGCGATCAACAACCTAGC 59.339 52.381 4.22 0.00 0.00 3.42
218 219 1.291132 GAGCGATCAACAACCTAGCC 58.709 55.000 0.00 0.00 0.00 3.93
219 220 0.613260 AGCGATCAACAACCTAGCCA 59.387 50.000 0.00 0.00 0.00 4.75
220 221 1.003118 AGCGATCAACAACCTAGCCAA 59.997 47.619 0.00 0.00 0.00 4.52
221 222 1.810151 GCGATCAACAACCTAGCCAAA 59.190 47.619 0.00 0.00 0.00 3.28
222 223 2.227865 GCGATCAACAACCTAGCCAAAA 59.772 45.455 0.00 0.00 0.00 2.44
223 224 3.305064 GCGATCAACAACCTAGCCAAAAA 60.305 43.478 0.00 0.00 0.00 1.94
268 269 6.785337 AAAAACAACCTAGCCACTAAACTT 57.215 33.333 0.00 0.00 0.00 2.66
269 270 5.767816 AAACAACCTAGCCACTAAACTTG 57.232 39.130 0.00 0.00 0.00 3.16
270 271 4.699925 ACAACCTAGCCACTAAACTTGA 57.300 40.909 0.00 0.00 0.00 3.02
271 272 4.642429 ACAACCTAGCCACTAAACTTGAG 58.358 43.478 0.00 0.00 0.00 3.02
272 273 3.336138 ACCTAGCCACTAAACTTGAGC 57.664 47.619 0.00 0.00 0.00 4.26
273 274 2.637872 ACCTAGCCACTAAACTTGAGCA 59.362 45.455 0.00 0.00 0.00 4.26
274 275 3.265791 CCTAGCCACTAAACTTGAGCAG 58.734 50.000 0.00 0.00 0.00 4.24
275 276 2.191128 AGCCACTAAACTTGAGCAGG 57.809 50.000 0.00 0.00 0.00 4.85
276 277 0.523519 GCCACTAAACTTGAGCAGGC 59.476 55.000 0.00 0.00 33.09 4.85
277 278 0.798776 CCACTAAACTTGAGCAGGCG 59.201 55.000 0.00 0.00 0.00 5.52
278 279 0.166814 CACTAAACTTGAGCAGGCGC 59.833 55.000 0.00 0.00 38.99 6.53
279 280 0.250295 ACTAAACTTGAGCAGGCGCA 60.250 50.000 10.83 0.00 42.27 6.09
280 281 0.445436 CTAAACTTGAGCAGGCGCAG 59.555 55.000 10.83 1.27 42.27 5.18
281 282 0.034756 TAAACTTGAGCAGGCGCAGA 59.965 50.000 10.83 0.00 42.27 4.26
282 283 0.607489 AAACTTGAGCAGGCGCAGAT 60.607 50.000 10.83 0.00 42.27 2.90
283 284 1.303799 AACTTGAGCAGGCGCAGATG 61.304 55.000 10.83 5.87 42.27 2.90
284 285 1.744368 CTTGAGCAGGCGCAGATGT 60.744 57.895 10.83 0.00 42.27 3.06
285 286 1.703438 CTTGAGCAGGCGCAGATGTC 61.703 60.000 10.83 6.03 42.27 3.06
286 287 2.894387 GAGCAGGCGCAGATGTCC 60.894 66.667 10.83 0.00 42.27 4.02
287 288 3.670637 GAGCAGGCGCAGATGTCCA 62.671 63.158 10.83 0.00 42.27 4.02
288 289 3.503363 GCAGGCGCAGATGTCCAC 61.503 66.667 10.83 0.00 38.36 4.02
289 290 2.267006 CAGGCGCAGATGTCCACT 59.733 61.111 10.83 0.00 0.00 4.00
290 291 2.104859 CAGGCGCAGATGTCCACTG 61.105 63.158 10.83 0.00 38.27 3.66
291 292 2.046892 GGCGCAGATGTCCACTGT 60.047 61.111 10.83 0.00 37.64 3.55
292 293 1.672356 GGCGCAGATGTCCACTGTT 60.672 57.895 10.83 0.00 37.64 3.16
293 294 0.391130 GGCGCAGATGTCCACTGTTA 60.391 55.000 10.83 0.00 37.64 2.41
294 295 0.721718 GCGCAGATGTCCACTGTTAC 59.278 55.000 0.30 0.00 37.64 2.50
295 296 1.673033 GCGCAGATGTCCACTGTTACT 60.673 52.381 0.30 0.00 37.64 2.24
296 297 2.416836 GCGCAGATGTCCACTGTTACTA 60.417 50.000 0.30 0.00 37.64 1.82
297 298 3.845178 CGCAGATGTCCACTGTTACTAA 58.155 45.455 0.00 0.00 37.64 2.24
298 299 4.433615 CGCAGATGTCCACTGTTACTAAT 58.566 43.478 0.00 0.00 37.64 1.73
299 300 4.504461 CGCAGATGTCCACTGTTACTAATC 59.496 45.833 0.00 0.00 37.64 1.75
300 301 4.811557 GCAGATGTCCACTGTTACTAATCC 59.188 45.833 0.00 0.00 37.64 3.01
301 302 5.395768 GCAGATGTCCACTGTTACTAATCCT 60.396 44.000 0.00 0.00 37.64 3.24
302 303 6.183360 GCAGATGTCCACTGTTACTAATCCTA 60.183 42.308 0.00 0.00 37.64 2.94
303 304 7.472100 GCAGATGTCCACTGTTACTAATCCTAT 60.472 40.741 0.00 0.00 37.64 2.57
304 305 7.869937 CAGATGTCCACTGTTACTAATCCTATG 59.130 40.741 0.00 0.00 0.00 2.23
305 306 6.479972 TGTCCACTGTTACTAATCCTATGG 57.520 41.667 0.00 0.00 0.00 2.74
306 307 5.163343 TGTCCACTGTTACTAATCCTATGGC 60.163 44.000 0.00 0.00 0.00 4.40
307 308 4.038763 TCCACTGTTACTAATCCTATGGCG 59.961 45.833 0.00 0.00 0.00 5.69
308 309 4.202223 CCACTGTTACTAATCCTATGGCGT 60.202 45.833 0.00 0.00 0.00 5.68
309 310 5.010314 CCACTGTTACTAATCCTATGGCGTA 59.990 44.000 0.00 0.00 0.00 4.42
310 311 5.919141 CACTGTTACTAATCCTATGGCGTAC 59.081 44.000 0.00 0.00 0.00 3.67
311 312 5.010415 ACTGTTACTAATCCTATGGCGTACC 59.990 44.000 0.00 0.00 0.00 3.34
312 313 4.281688 TGTTACTAATCCTATGGCGTACCC 59.718 45.833 0.00 0.00 33.59 3.69
313 314 3.255634 ACTAATCCTATGGCGTACCCT 57.744 47.619 2.61 0.00 33.59 4.34
314 315 4.393239 ACTAATCCTATGGCGTACCCTA 57.607 45.455 2.61 0.00 33.59 3.53
315 316 4.744237 ACTAATCCTATGGCGTACCCTAA 58.256 43.478 2.61 0.00 33.59 2.69
316 317 5.149976 ACTAATCCTATGGCGTACCCTAAA 58.850 41.667 2.61 0.00 33.59 1.85
317 318 5.603813 ACTAATCCTATGGCGTACCCTAAAA 59.396 40.000 2.61 0.00 33.59 1.52
318 319 5.376756 AATCCTATGGCGTACCCTAAAAA 57.623 39.130 2.61 0.00 33.59 1.94
340 341 5.410355 AAAACTAATCCTACGGCTACACA 57.590 39.130 0.00 0.00 0.00 3.72
341 342 4.650754 AACTAATCCTACGGCTACACAG 57.349 45.455 0.00 0.00 0.00 3.66
342 343 2.957006 ACTAATCCTACGGCTACACAGG 59.043 50.000 0.00 0.00 0.00 4.00
343 344 1.861982 AATCCTACGGCTACACAGGT 58.138 50.000 0.00 0.00 0.00 4.00
344 345 1.112113 ATCCTACGGCTACACAGGTG 58.888 55.000 0.00 0.00 0.00 4.00
345 346 0.038599 TCCTACGGCTACACAGGTGA 59.961 55.000 6.40 0.00 0.00 4.02
346 347 0.892755 CCTACGGCTACACAGGTGAA 59.107 55.000 6.40 0.00 0.00 3.18
347 348 1.480954 CCTACGGCTACACAGGTGAAT 59.519 52.381 6.40 0.00 0.00 2.57
348 349 2.540515 CTACGGCTACACAGGTGAATG 58.459 52.381 6.40 0.00 0.00 2.67
349 350 0.973632 ACGGCTACACAGGTGAATGA 59.026 50.000 6.40 0.00 0.00 2.57
350 351 1.555075 ACGGCTACACAGGTGAATGAT 59.445 47.619 6.40 0.00 0.00 2.45
351 352 1.935873 CGGCTACACAGGTGAATGATG 59.064 52.381 6.40 0.00 0.00 3.07
352 353 1.672881 GGCTACACAGGTGAATGATGC 59.327 52.381 6.40 1.48 0.00 3.91
353 354 2.636830 GCTACACAGGTGAATGATGCT 58.363 47.619 6.40 0.00 0.00 3.79
354 355 3.432186 GGCTACACAGGTGAATGATGCTA 60.432 47.826 6.40 0.00 0.00 3.49
355 356 4.191544 GCTACACAGGTGAATGATGCTAA 58.808 43.478 6.40 0.00 0.00 3.09
356 357 4.272018 GCTACACAGGTGAATGATGCTAAG 59.728 45.833 6.40 0.00 0.00 2.18
357 358 3.012518 ACACAGGTGAATGATGCTAAGC 58.987 45.455 6.40 0.00 0.00 3.09
358 359 3.276857 CACAGGTGAATGATGCTAAGCT 58.723 45.455 0.00 0.00 0.00 3.74
359 360 4.080919 ACACAGGTGAATGATGCTAAGCTA 60.081 41.667 6.40 0.00 0.00 3.32
360 361 4.877823 CACAGGTGAATGATGCTAAGCTAA 59.122 41.667 0.00 0.00 0.00 3.09
361 362 5.355071 CACAGGTGAATGATGCTAAGCTAAA 59.645 40.000 0.00 0.00 0.00 1.85
362 363 5.945784 ACAGGTGAATGATGCTAAGCTAAAA 59.054 36.000 0.00 0.00 0.00 1.52
363 364 6.127897 ACAGGTGAATGATGCTAAGCTAAAAC 60.128 38.462 0.00 0.00 0.00 2.43
364 365 5.358160 AGGTGAATGATGCTAAGCTAAAACC 59.642 40.000 0.00 0.00 0.00 3.27
365 366 5.125417 GGTGAATGATGCTAAGCTAAAACCA 59.875 40.000 0.00 0.00 0.00 3.67
366 367 6.350110 GGTGAATGATGCTAAGCTAAAACCAA 60.350 38.462 0.00 0.00 0.00 3.67
367 368 7.090173 GTGAATGATGCTAAGCTAAAACCAAA 58.910 34.615 0.00 0.00 0.00 3.28
368 369 7.598493 GTGAATGATGCTAAGCTAAAACCAAAA 59.402 33.333 0.00 0.00 0.00 2.44
369 370 7.598493 TGAATGATGCTAAGCTAAAACCAAAAC 59.402 33.333 0.00 0.00 0.00 2.43
370 371 5.778862 TGATGCTAAGCTAAAACCAAAACC 58.221 37.500 0.00 0.00 0.00 3.27
371 372 4.231718 TGCTAAGCTAAAACCAAAACCG 57.768 40.909 0.00 0.00 0.00 4.44
372 373 3.633065 TGCTAAGCTAAAACCAAAACCGT 59.367 39.130 0.00 0.00 0.00 4.83
373 374 4.098196 TGCTAAGCTAAAACCAAAACCGTT 59.902 37.500 0.00 0.00 0.00 4.44
374 375 4.443063 GCTAAGCTAAAACCAAAACCGTTG 59.557 41.667 0.00 0.00 0.00 4.10
375 376 2.816689 AGCTAAAACCAAAACCGTTGC 58.183 42.857 0.00 0.00 0.00 4.17
376 377 2.166664 AGCTAAAACCAAAACCGTTGCA 59.833 40.909 0.00 0.00 0.00 4.08
377 378 2.930682 GCTAAAACCAAAACCGTTGCAA 59.069 40.909 0.00 0.00 0.00 4.08
378 379 3.242155 GCTAAAACCAAAACCGTTGCAAC 60.242 43.478 19.89 19.89 0.00 4.17
379 380 2.457366 AAACCAAAACCGTTGCAACA 57.543 40.000 28.01 0.00 0.00 3.33
380 381 2.457366 AACCAAAACCGTTGCAACAA 57.543 40.000 28.01 0.00 0.00 2.83
381 382 2.457366 ACCAAAACCGTTGCAACAAA 57.543 40.000 28.01 0.00 0.00 2.83
382 383 2.070028 ACCAAAACCGTTGCAACAAAC 58.930 42.857 28.01 3.05 0.00 2.93
389 390 0.045419 CGTTGCAACAAACGTTTCGC 60.045 50.000 28.01 14.27 46.02 4.70
390 391 0.985549 GTTGCAACAAACGTTTCGCA 59.014 45.000 24.52 19.78 0.00 5.10
391 392 1.007524 GTTGCAACAAACGTTTCGCAG 60.008 47.619 24.52 10.76 0.00 5.18
392 393 1.136872 TGCAACAAACGTTTCGCAGC 61.137 50.000 19.78 16.85 0.00 5.25
393 394 1.807242 GCAACAAACGTTTCGCAGCC 61.807 55.000 11.37 0.00 0.00 4.85
394 395 0.248458 CAACAAACGTTTCGCAGCCT 60.248 50.000 11.37 0.00 0.00 4.58
395 396 0.454196 AACAAACGTTTCGCAGCCTT 59.546 45.000 11.37 0.00 0.00 4.35
396 397 0.454196 ACAAACGTTTCGCAGCCTTT 59.546 45.000 11.37 0.00 0.00 3.11
397 398 1.671845 ACAAACGTTTCGCAGCCTTTA 59.328 42.857 11.37 0.00 0.00 1.85
398 399 2.097791 ACAAACGTTTCGCAGCCTTTAA 59.902 40.909 11.37 0.00 0.00 1.52
399 400 3.243267 ACAAACGTTTCGCAGCCTTTAAT 60.243 39.130 11.37 0.00 0.00 1.40
400 401 2.611974 ACGTTTCGCAGCCTTTAATG 57.388 45.000 0.00 0.00 0.00 1.90
401 402 1.259316 CGTTTCGCAGCCTTTAATGC 58.741 50.000 0.00 0.00 39.09 3.56
402 403 1.400888 CGTTTCGCAGCCTTTAATGCA 60.401 47.619 0.00 0.00 42.68 3.96
403 404 2.253603 GTTTCGCAGCCTTTAATGCAG 58.746 47.619 0.00 0.00 42.68 4.41
404 405 0.171007 TTCGCAGCCTTTAATGCAGC 59.829 50.000 0.00 0.09 42.68 5.25
405 406 0.959867 TCGCAGCCTTTAATGCAGCA 60.960 50.000 9.71 0.00 42.68 4.41
406 407 0.109179 CGCAGCCTTTAATGCAGCAA 60.109 50.000 0.00 0.00 42.68 3.91
407 408 1.669502 CGCAGCCTTTAATGCAGCAAA 60.670 47.619 0.00 0.00 42.68 3.68
408 409 1.728425 GCAGCCTTTAATGCAGCAAAC 59.272 47.619 0.00 0.00 42.11 2.93
409 410 2.340337 CAGCCTTTAATGCAGCAAACC 58.660 47.619 0.00 0.00 0.00 3.27
410 411 1.969923 AGCCTTTAATGCAGCAAACCA 59.030 42.857 0.00 0.00 0.00 3.67
411 412 2.068519 GCCTTTAATGCAGCAAACCAC 58.931 47.619 0.00 0.00 0.00 4.16
412 413 2.327568 CCTTTAATGCAGCAAACCACG 58.672 47.619 0.00 0.00 0.00 4.94
413 414 2.327568 CTTTAATGCAGCAAACCACGG 58.672 47.619 0.00 0.00 0.00 4.94
414 415 0.038709 TTAATGCAGCAAACCACGGC 60.039 50.000 0.00 0.00 0.00 5.68
415 416 1.872197 TAATGCAGCAAACCACGGCC 61.872 55.000 0.00 0.00 0.00 6.13
418 419 3.365265 CAGCAAACCACGGCCCTC 61.365 66.667 0.00 0.00 0.00 4.30
419 420 4.660938 AGCAAACCACGGCCCTCC 62.661 66.667 0.00 0.00 0.00 4.30
420 421 4.660938 GCAAACCACGGCCCTCCT 62.661 66.667 0.00 0.00 0.00 3.69
421 422 2.672996 CAAACCACGGCCCTCCTG 60.673 66.667 0.00 0.00 0.00 3.86
422 423 2.852075 AAACCACGGCCCTCCTGA 60.852 61.111 0.00 0.00 0.00 3.86
423 424 3.192103 AAACCACGGCCCTCCTGAC 62.192 63.158 0.00 0.00 0.00 3.51
424 425 4.640690 ACCACGGCCCTCCTGACT 62.641 66.667 0.00 0.00 0.00 3.41
425 426 3.775654 CCACGGCCCTCCTGACTC 61.776 72.222 0.00 0.00 0.00 3.36
426 427 2.681778 CACGGCCCTCCTGACTCT 60.682 66.667 0.00 0.00 0.00 3.24
427 428 1.379977 CACGGCCCTCCTGACTCTA 60.380 63.158 0.00 0.00 0.00 2.43
428 429 0.757188 CACGGCCCTCCTGACTCTAT 60.757 60.000 0.00 0.00 0.00 1.98
429 430 0.032017 ACGGCCCTCCTGACTCTATT 60.032 55.000 0.00 0.00 0.00 1.73
430 431 1.123928 CGGCCCTCCTGACTCTATTT 58.876 55.000 0.00 0.00 0.00 1.40
431 432 1.069358 CGGCCCTCCTGACTCTATTTC 59.931 57.143 0.00 0.00 0.00 2.17
432 433 2.403561 GGCCCTCCTGACTCTATTTCT 58.596 52.381 0.00 0.00 0.00 2.52
433 434 2.367241 GGCCCTCCTGACTCTATTTCTC 59.633 54.545 0.00 0.00 0.00 2.87
434 435 3.034635 GCCCTCCTGACTCTATTTCTCA 58.965 50.000 0.00 0.00 0.00 3.27
435 436 3.645687 GCCCTCCTGACTCTATTTCTCAT 59.354 47.826 0.00 0.00 0.00 2.90
436 437 4.835615 GCCCTCCTGACTCTATTTCTCATA 59.164 45.833 0.00 0.00 0.00 2.15
437 438 5.483583 GCCCTCCTGACTCTATTTCTCATAT 59.516 44.000 0.00 0.00 0.00 1.78
438 439 6.665680 GCCCTCCTGACTCTATTTCTCATATA 59.334 42.308 0.00 0.00 0.00 0.86
439 440 7.363443 GCCCTCCTGACTCTATTTCTCATATAC 60.363 44.444 0.00 0.00 0.00 1.47
440 441 7.893302 CCCTCCTGACTCTATTTCTCATATACT 59.107 40.741 0.00 0.00 0.00 2.12
441 442 9.967451 CCTCCTGACTCTATTTCTCATATACTA 57.033 37.037 0.00 0.00 0.00 1.82
533 534 2.293399 AGAAAACACGGCACCAATCTTC 59.707 45.455 0.00 0.00 0.00 2.87
574 587 3.380637 ACAGACGTGCCGATAACTAGAAT 59.619 43.478 0.00 0.00 0.00 2.40
580 593 5.815740 ACGTGCCGATAACTAGAATTTTCAT 59.184 36.000 0.00 0.00 0.00 2.57
596 609 1.444895 CATTTTCAGGCACGCAGGC 60.445 57.895 0.00 0.00 44.61 4.85
644 657 1.549203 GGTGGACCGTGGAGTACTTA 58.451 55.000 0.00 0.00 0.00 2.24
674 687 2.363788 TACCAATGACGACACTGCTC 57.636 50.000 0.00 0.00 0.00 4.26
675 688 0.681733 ACCAATGACGACACTGCTCT 59.318 50.000 0.00 0.00 0.00 4.09
716 732 4.039357 CCGTGTCTGTCGGCGAGT 62.039 66.667 11.20 0.00 41.48 4.18
722 741 1.736126 TGTCTGTCGGCGAGTAAGTAG 59.264 52.381 11.20 2.36 0.00 2.57
757 776 1.451028 GAGTGCTCTGCATGACCCC 60.451 63.158 0.00 0.00 41.91 4.95
759 778 1.001641 GTGCTCTGCATGACCCCTT 60.002 57.895 0.00 0.00 41.91 3.95
760 779 0.610232 GTGCTCTGCATGACCCCTTT 60.610 55.000 0.00 0.00 41.91 3.11
805 824 3.740115 AGTGCTTTCCATGACTAACGTT 58.260 40.909 5.88 5.88 0.00 3.99
846 865 7.633789 ACATCAACTGTCCAATTCTATAACCT 58.366 34.615 0.00 0.00 29.94 3.50
848 867 7.252612 TCAACTGTCCAATTCTATAACCTGA 57.747 36.000 0.00 0.00 0.00 3.86
874 893 0.670162 GGCGCCTATCATTGTGCAAT 59.330 50.000 22.15 0.00 39.69 3.56
882 901 4.460382 CCTATCATTGTGCAATGTATCCCC 59.540 45.833 20.21 0.00 46.15 4.81
910 929 9.981114 CCATAAACAATTTCTAAACTCCTTGTT 57.019 29.630 0.00 0.00 41.29 2.83
931 950 0.334676 CTCTCCCTCAGGTCACCTCT 59.665 60.000 0.00 0.00 0.00 3.69
976 995 6.268387 ACCAAAAGATCACACAATCTTCCATT 59.732 34.615 0.00 0.00 43.53 3.16
995 1014 4.763793 CCATTCAAGAACTCACAATCCAGT 59.236 41.667 0.00 0.00 0.00 4.00
1021 1040 1.133513 TGTCTTGGGCTGAAACCATGT 60.134 47.619 0.00 0.00 37.93 3.21
1057 1076 2.825264 CGCTCTCCATTCCCCCTC 59.175 66.667 0.00 0.00 0.00 4.30
1142 1161 2.438434 CAACGCCACCATCCCCTC 60.438 66.667 0.00 0.00 0.00 4.30
1176 1195 2.810012 CGACGGCTCGACGATCAGA 61.810 63.158 12.24 0.00 46.01 3.27
1240 1259 3.207669 CCTGCGGCTTCATCTGCC 61.208 66.667 0.00 0.00 46.42 4.85
1300 1319 2.359354 TGTCCATTGGCGGTTCCG 60.359 61.111 6.90 6.90 37.80 4.30
1383 1402 0.911769 ATCCGGTGAAGGAGAATGCA 59.088 50.000 0.00 0.00 44.55 3.96
1386 1405 1.407299 CCGGTGAAGGAGAATGCATCA 60.407 52.381 0.00 0.00 0.00 3.07
1404 1423 0.617413 CAGTCCAGCTCACCAAGGAT 59.383 55.000 0.00 0.00 31.91 3.24
1405 1424 1.833630 CAGTCCAGCTCACCAAGGATA 59.166 52.381 0.00 0.00 31.91 2.59
1434 1453 4.023980 TCATACTCCGAGACTTTGATGGT 58.976 43.478 1.33 0.00 0.00 3.55
1455 1474 0.606401 CGCTGGTCTGGTCCACAAAT 60.606 55.000 0.00 0.00 33.55 2.32
1464 1483 1.201181 TGGTCCACAAATACATTGCGC 59.799 47.619 0.00 0.00 43.13 6.09
1488 1507 2.349843 CGTCGTCGGTGTGAATCTG 58.650 57.895 0.00 0.00 0.00 2.90
1494 1513 0.037326 TCGGTGTGAATCTGGCTGAC 60.037 55.000 0.00 0.00 0.00 3.51
1497 1516 1.160137 GTGTGAATCTGGCTGACACC 58.840 55.000 11.00 2.18 32.48 4.16
1500 1519 2.045926 AATCTGGCTGACACCGGC 60.046 61.111 0.00 0.00 43.89 6.13
1545 1564 1.080705 GAAGACGGTGTGGGAGTCG 60.081 63.158 0.00 0.00 39.65 4.18
1566 1585 1.823169 TTGAGCACCCTACCGACACC 61.823 60.000 0.00 0.00 0.00 4.16
2025 2044 3.034635 AGTGTGTGGAGAGTATGGGATC 58.965 50.000 0.00 0.00 0.00 3.36
2037 2056 1.516110 ATGGGATCTGTTCAGAGGGG 58.484 55.000 8.47 0.00 0.00 4.79
2067 2086 1.676967 CCCAGCTGGAAGTTCTGGC 60.677 63.158 34.91 7.56 41.30 4.85
2071 2090 2.383527 GCTGGAAGTTCTGGCGACG 61.384 63.158 2.25 0.00 35.30 5.12
2080 2099 1.827315 TTCTGGCGACGCACTTTTCG 61.827 55.000 23.09 0.00 38.31 3.46
2081 2100 2.279584 TGGCGACGCACTTTTCGA 60.280 55.556 23.09 0.00 37.43 3.71
2112 2131 0.912487 ACCGGCAACCTAATCTGGGA 60.912 55.000 0.00 0.00 0.00 4.37
2368 2387 9.707957 AACATGGAACCATTGGATATAACTTAA 57.292 29.630 10.37 0.00 33.90 1.85
2511 2530 4.406456 TCAAAAGGGCAATAGCAAAGAGA 58.594 39.130 0.00 0.00 44.61 3.10
2526 2545 3.625649 AAGAGAATGCAAGAGGAGGAC 57.374 47.619 0.00 0.00 0.00 3.85
2532 2551 1.079057 GCAAGAGGAGGACCCGTTC 60.079 63.158 0.00 0.00 40.87 3.95
2589 2608 2.763249 AACAGCTGAAAGAAGCAACG 57.237 45.000 23.35 0.00 46.08 4.10
2643 2662 4.263506 GGATTTGGTCCAGTATATGAGGGG 60.264 50.000 0.00 0.00 46.96 4.79
2682 2701 2.515926 TTGCCGTTAAATGCTTGCAA 57.484 40.000 0.00 0.00 36.46 4.08
2700 2719 2.562298 GCAAGACATTGGACATGGGAAA 59.438 45.455 0.00 0.00 36.88 3.13
2805 2824 2.762535 TGCACAGGCTCCTAGTTTAC 57.237 50.000 0.00 0.00 41.91 2.01
2875 2894 4.780815 TCAAAGTGATTCACTCAGTTGGT 58.219 39.130 19.23 0.00 44.98 3.67
3465 3484 3.427233 GCAGAGATGACATTTGTGAAGCC 60.427 47.826 7.24 0.00 0.00 4.35
3685 3713 7.787028 ACAAGCAAAGGTAGTTTAATTTTCCA 58.213 30.769 0.00 0.00 0.00 3.53
3708 3736 7.888021 TCCATTCTGTTTTCCACACTAATATGT 59.112 33.333 0.00 0.00 0.00 2.29
3709 3737 9.173021 CCATTCTGTTTTCCACACTAATATGTA 57.827 33.333 0.00 0.00 0.00 2.29
3710 3738 9.988350 CATTCTGTTTTCCACACTAATATGTAC 57.012 33.333 0.00 0.00 0.00 2.90
3711 3739 9.959721 ATTCTGTTTTCCACACTAATATGTACT 57.040 29.630 0.00 0.00 0.00 2.73
3712 3740 8.997621 TCTGTTTTCCACACTAATATGTACTC 57.002 34.615 0.00 0.00 0.00 2.59
3713 3741 8.038944 TCTGTTTTCCACACTAATATGTACTCC 58.961 37.037 0.00 0.00 0.00 3.85
3714 3742 7.107542 TGTTTTCCACACTAATATGTACTCCC 58.892 38.462 0.00 0.00 0.00 4.30
3715 3743 7.037873 TGTTTTCCACACTAATATGTACTCCCT 60.038 37.037 0.00 0.00 0.00 4.20
3716 3744 6.726490 TTCCACACTAATATGTACTCCCTC 57.274 41.667 0.00 0.00 0.00 4.30
3717 3745 5.145564 TCCACACTAATATGTACTCCCTCC 58.854 45.833 0.00 0.00 0.00 4.30
3718 3746 4.022242 CCACACTAATATGTACTCCCTCCG 60.022 50.000 0.00 0.00 0.00 4.63
3719 3747 4.583489 CACACTAATATGTACTCCCTCCGT 59.417 45.833 0.00 0.00 0.00 4.69
3720 3748 4.826183 ACACTAATATGTACTCCCTCCGTC 59.174 45.833 0.00 0.00 0.00 4.79
3721 3749 4.217983 CACTAATATGTACTCCCTCCGTCC 59.782 50.000 0.00 0.00 0.00 4.79
3722 3750 1.906990 ATATGTACTCCCTCCGTCCG 58.093 55.000 0.00 0.00 0.00 4.79
3723 3751 0.839277 TATGTACTCCCTCCGTCCGA 59.161 55.000 0.00 0.00 0.00 4.55
3724 3752 0.033796 ATGTACTCCCTCCGTCCGAA 60.034 55.000 0.00 0.00 0.00 4.30
3725 3753 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
3726 3754 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
3727 3755 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
3728 3756 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
3729 3757 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
3730 3758 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
3731 3759 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
3732 3760 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
3733 3761 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
3734 3762 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
3735 3763 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
3736 3764 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
3737 3765 1.605753 GTCCGAAAAAGCTTGTCCCT 58.394 50.000 0.00 0.00 0.00 4.20
3738 3766 1.535896 GTCCGAAAAAGCTTGTCCCTC 59.464 52.381 0.00 0.00 0.00 4.30
3739 3767 1.142060 TCCGAAAAAGCTTGTCCCTCA 59.858 47.619 0.00 0.00 0.00 3.86
3740 3768 1.953686 CCGAAAAAGCTTGTCCCTCAA 59.046 47.619 0.00 0.00 34.61 3.02
3741 3769 2.360801 CCGAAAAAGCTTGTCCCTCAAA 59.639 45.455 0.00 0.00 35.48 2.69
3742 3770 3.005791 CCGAAAAAGCTTGTCCCTCAAAT 59.994 43.478 0.00 0.00 35.48 2.32
3743 3771 3.983344 CGAAAAAGCTTGTCCCTCAAATG 59.017 43.478 0.00 0.00 35.48 2.32
3744 3772 4.309933 GAAAAAGCTTGTCCCTCAAATGG 58.690 43.478 0.00 0.00 35.48 3.16
3745 3773 2.978156 AAGCTTGTCCCTCAAATGGA 57.022 45.000 0.00 0.00 35.48 3.41
3746 3774 3.463048 AAGCTTGTCCCTCAAATGGAT 57.537 42.857 0.00 0.00 35.48 3.41
3747 3775 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
3748 3776 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
3749 3777 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
3750 3778 3.378427 GCTTGTCCCTCAAATGGATGTAC 59.622 47.826 0.00 0.00 35.48 2.90
3751 3779 3.644966 TGTCCCTCAAATGGATGTACC 57.355 47.619 0.00 0.00 33.65 3.34
3752 3780 3.189606 TGTCCCTCAAATGGATGTACCT 58.810 45.455 0.00 0.00 39.86 3.08
3753 3781 4.367166 TGTCCCTCAAATGGATGTACCTA 58.633 43.478 0.00 0.00 39.86 3.08
3754 3782 4.408921 TGTCCCTCAAATGGATGTACCTAG 59.591 45.833 0.00 0.00 39.86 3.02
3755 3783 3.391296 TCCCTCAAATGGATGTACCTAGC 59.609 47.826 0.00 0.00 39.86 3.42
3756 3784 3.136443 CCCTCAAATGGATGTACCTAGCA 59.864 47.826 0.00 0.00 39.86 3.49
3757 3785 4.130118 CCTCAAATGGATGTACCTAGCAC 58.870 47.826 0.00 0.00 39.86 4.40
3758 3786 4.130118 CTCAAATGGATGTACCTAGCACC 58.870 47.826 0.00 0.00 39.86 5.01
3759 3787 3.521531 TCAAATGGATGTACCTAGCACCA 59.478 43.478 0.00 0.00 39.86 4.17
3760 3788 4.018870 TCAAATGGATGTACCTAGCACCAA 60.019 41.667 0.00 0.00 39.86 3.67
3761 3789 3.845781 ATGGATGTACCTAGCACCAAG 57.154 47.619 0.00 0.00 39.86 3.61
3762 3790 2.546899 TGGATGTACCTAGCACCAAGT 58.453 47.619 0.00 0.00 39.86 3.16
3763 3791 2.910319 TGGATGTACCTAGCACCAAGTT 59.090 45.455 0.00 0.00 39.86 2.66
3764 3792 4.098155 TGGATGTACCTAGCACCAAGTTA 58.902 43.478 0.00 0.00 39.86 2.24
3765 3793 4.161565 TGGATGTACCTAGCACCAAGTTAG 59.838 45.833 0.00 0.00 39.86 2.34
3766 3794 4.161754 GGATGTACCTAGCACCAAGTTAGT 59.838 45.833 0.00 0.00 35.41 2.24
3767 3795 4.530710 TGTACCTAGCACCAAGTTAGTG 57.469 45.455 0.00 0.00 38.30 2.74
3779 3807 5.986135 CACCAAGTTAGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
3780 3808 5.661312 ACCAAGTTAGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
3781 3809 6.327626 ACCAAGTTAGTGCTAGATACATCCAT 59.672 38.462 0.00 0.00 0.00 3.41
3782 3810 7.147479 ACCAAGTTAGTGCTAGATACATCCATT 60.147 37.037 0.00 0.00 0.00 3.16
3783 3811 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
3784 3812 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
3785 3813 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
3786 3814 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
3787 3815 5.862845 AGTGCTAGATACATCCATTTGAGG 58.137 41.667 0.00 0.00 0.00 3.86
3788 3816 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
3789 3817 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
3790 3818 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
3791 3819 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
3792 3820 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
3793 3821 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
3794 3822 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
3795 3823 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
3796 3824 2.978156 TCCATTTGAGGGACAAGCTT 57.022 45.000 0.00 0.00 39.77 3.74
3797 3825 2.517959 TCCATTTGAGGGACAAGCTTG 58.482 47.619 24.84 24.84 39.77 4.01
3798 3826 1.547372 CCATTTGAGGGACAAGCTTGG 59.453 52.381 29.18 12.28 39.77 3.61
3799 3827 1.547372 CATTTGAGGGACAAGCTTGGG 59.453 52.381 29.18 6.83 39.77 4.12
3800 3828 0.850100 TTTGAGGGACAAGCTTGGGA 59.150 50.000 29.18 4.51 39.77 4.37
3801 3829 0.110486 TTGAGGGACAAGCTTGGGAC 59.890 55.000 29.18 18.90 34.20 4.46
3802 3830 1.059584 TGAGGGACAAGCTTGGGACA 61.060 55.000 29.18 17.71 0.00 4.02
3803 3831 4.092026 TTGAGGGACAAGCTTGGGACAA 62.092 50.000 29.18 21.59 37.48 3.18
3804 3832 5.893518 TTGAGGGACAAGCTTGGGACAAG 62.894 52.174 29.18 3.71 37.48 3.16
3815 3843 2.249844 TGGGACAAGTTTTCTCGGAC 57.750 50.000 0.00 0.00 31.92 4.79
3816 3844 1.145803 GGGACAAGTTTTCTCGGACG 58.854 55.000 0.00 0.00 0.00 4.79
3817 3845 1.145803 GGACAAGTTTTCTCGGACGG 58.854 55.000 0.00 0.00 0.00 4.79
3818 3846 1.269936 GGACAAGTTTTCTCGGACGGA 60.270 52.381 0.00 0.00 0.00 4.69
3819 3847 2.059541 GACAAGTTTTCTCGGACGGAG 58.940 52.381 3.68 3.68 44.58 4.63
3820 3848 1.270147 ACAAGTTTTCTCGGACGGAGG 60.270 52.381 9.88 0.00 43.34 4.30
3821 3849 0.320697 AAGTTTTCTCGGACGGAGGG 59.679 55.000 9.88 0.00 43.34 4.30
3822 3850 0.541296 AGTTTTCTCGGACGGAGGGA 60.541 55.000 9.88 0.00 43.34 4.20
3823 3851 0.108756 GTTTTCTCGGACGGAGGGAG 60.109 60.000 9.88 0.00 43.34 4.30
4062 4092 2.228822 ACCACCTTCAACAATCAATCGC 59.771 45.455 0.00 0.00 0.00 4.58
4078 4109 4.155099 TCAATCGCCACATGTAAAACGAAT 59.845 37.500 13.35 5.19 32.79 3.34
4151 4189 7.581213 TCAAAAGATCTTTAAGACTGGCAAA 57.419 32.000 20.76 0.00 31.63 3.68
4154 4192 7.446001 AAAGATCTTTAAGACTGGCAAAGAG 57.554 36.000 19.17 0.00 40.54 2.85
4243 4282 2.378886 CCCCTTCCTAAACCCTCTTTGT 59.621 50.000 0.00 0.00 0.00 2.83
4271 4325 5.649395 ACTATATCAAGCAACAGCACACATT 59.351 36.000 0.00 0.00 0.00 2.71
4330 4386 4.929211 TCAAAGAGACACCACATATGAACG 59.071 41.667 10.38 0.00 0.00 3.95
4362 4418 4.286297 TCATGCAAGGCTACAACTTAGT 57.714 40.909 0.00 0.00 0.00 2.24
4480 4537 4.437390 CCGCAACAAAAGCACTAATAGAGG 60.437 45.833 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 101 8.536175 TCTTTCTCACTGGTTTTTATGGTTTTT 58.464 29.630 0.00 0.00 0.00 1.94
101 102 8.073467 TCTTTCTCACTGGTTTTTATGGTTTT 57.927 30.769 0.00 0.00 0.00 2.43
102 103 7.654022 TCTTTCTCACTGGTTTTTATGGTTT 57.346 32.000 0.00 0.00 0.00 3.27
103 104 7.839680 ATCTTTCTCACTGGTTTTTATGGTT 57.160 32.000 0.00 0.00 0.00 3.67
104 105 7.839680 AATCTTTCTCACTGGTTTTTATGGT 57.160 32.000 0.00 0.00 0.00 3.55
105 106 9.546428 AAAAATCTTTCTCACTGGTTTTTATGG 57.454 29.630 0.00 0.00 0.00 2.74
128 129 4.742659 GGTAGCAGCGAACAATTTGAAAAA 59.257 37.500 2.79 0.00 0.00 1.94
129 130 4.202060 TGGTAGCAGCGAACAATTTGAAAA 60.202 37.500 2.79 0.00 0.00 2.29
130 131 3.316588 TGGTAGCAGCGAACAATTTGAAA 59.683 39.130 2.79 0.00 0.00 2.69
131 132 2.881513 TGGTAGCAGCGAACAATTTGAA 59.118 40.909 2.79 0.00 0.00 2.69
132 133 2.225491 GTGGTAGCAGCGAACAATTTGA 59.775 45.455 2.79 0.00 0.00 2.69
133 134 2.226437 AGTGGTAGCAGCGAACAATTTG 59.774 45.455 0.00 0.00 0.00 2.32
134 135 2.504367 AGTGGTAGCAGCGAACAATTT 58.496 42.857 0.00 0.00 0.00 1.82
135 136 2.185004 AGTGGTAGCAGCGAACAATT 57.815 45.000 0.00 0.00 0.00 2.32
136 137 1.806542 CAAGTGGTAGCAGCGAACAAT 59.193 47.619 0.00 0.00 0.00 2.71
137 138 1.225855 CAAGTGGTAGCAGCGAACAA 58.774 50.000 0.00 0.00 0.00 2.83
138 139 0.105964 ACAAGTGGTAGCAGCGAACA 59.894 50.000 0.00 0.00 0.00 3.18
139 140 1.993370 CTACAAGTGGTAGCAGCGAAC 59.007 52.381 0.00 0.00 42.81 3.95
140 141 1.067142 CCTACAAGTGGTAGCAGCGAA 60.067 52.381 0.00 0.00 46.73 4.70
141 142 0.530744 CCTACAAGTGGTAGCAGCGA 59.469 55.000 0.00 0.00 46.73 4.93
142 143 1.084370 GCCTACAAGTGGTAGCAGCG 61.084 60.000 0.00 0.00 46.73 5.18
143 144 0.250513 AGCCTACAAGTGGTAGCAGC 59.749 55.000 0.00 0.00 46.73 5.25
144 145 1.827969 AGAGCCTACAAGTGGTAGCAG 59.172 52.381 0.00 0.00 46.73 4.24
145 146 1.938585 AGAGCCTACAAGTGGTAGCA 58.061 50.000 0.00 0.00 46.73 3.49
146 147 4.372656 CATTAGAGCCTACAAGTGGTAGC 58.627 47.826 0.00 0.00 46.73 3.58
148 149 3.709653 CCCATTAGAGCCTACAAGTGGTA 59.290 47.826 0.00 0.00 0.00 3.25
149 150 2.505819 CCCATTAGAGCCTACAAGTGGT 59.494 50.000 0.00 0.00 0.00 4.16
150 151 2.158755 CCCCATTAGAGCCTACAAGTGG 60.159 54.545 0.00 0.00 0.00 4.00
151 152 2.746472 GCCCCATTAGAGCCTACAAGTG 60.746 54.545 0.00 0.00 0.00 3.16
152 153 1.490910 GCCCCATTAGAGCCTACAAGT 59.509 52.381 0.00 0.00 0.00 3.16
153 154 1.202818 GGCCCCATTAGAGCCTACAAG 60.203 57.143 0.00 0.00 43.62 3.16
154 155 0.843984 GGCCCCATTAGAGCCTACAA 59.156 55.000 0.00 0.00 43.62 2.41
155 156 1.407656 CGGCCCCATTAGAGCCTACA 61.408 60.000 0.00 0.00 44.84 2.74
156 157 1.371558 CGGCCCCATTAGAGCCTAC 59.628 63.158 0.00 0.00 44.84 3.18
157 158 1.841556 CCGGCCCCATTAGAGCCTA 60.842 63.158 0.00 0.00 44.84 3.93
158 159 3.171388 CCGGCCCCATTAGAGCCT 61.171 66.667 0.00 0.00 44.84 4.58
159 160 4.956932 GCCGGCCCCATTAGAGCC 62.957 72.222 18.11 0.00 43.53 4.70
160 161 4.956932 GGCCGGCCCCATTAGAGC 62.957 72.222 36.64 5.01 0.00 4.09
170 171 2.822701 CTACTTTTCGGGCCGGCC 60.823 66.667 38.57 38.57 0.00 6.13
171 172 3.506096 GCTACTTTTCGGGCCGGC 61.506 66.667 27.98 21.18 0.00 6.13
172 173 2.046700 TGCTACTTTTCGGGCCGG 60.047 61.111 27.98 12.61 0.00 6.13
173 174 2.396157 GGTGCTACTTTTCGGGCCG 61.396 63.158 22.51 22.51 0.00 6.13
174 175 1.002502 AGGTGCTACTTTTCGGGCC 60.003 57.895 0.00 0.00 0.00 5.80
175 176 0.605589 ACAGGTGCTACTTTTCGGGC 60.606 55.000 0.00 0.00 0.00 6.13
176 177 1.156736 CACAGGTGCTACTTTTCGGG 58.843 55.000 0.00 0.00 0.00 5.14
177 178 1.531149 CACACAGGTGCTACTTTTCGG 59.469 52.381 0.00 0.00 38.37 4.30
178 179 2.949714 CACACAGGTGCTACTTTTCG 57.050 50.000 0.00 0.00 38.37 3.46
189 190 0.392706 TTGATCGCTCACACACAGGT 59.607 50.000 0.00 0.00 0.00 4.00
190 191 0.792640 GTTGATCGCTCACACACAGG 59.207 55.000 0.00 0.00 0.00 4.00
191 192 1.501169 TGTTGATCGCTCACACACAG 58.499 50.000 0.00 0.00 0.00 3.66
192 193 1.597195 GTTGTTGATCGCTCACACACA 59.403 47.619 0.00 0.00 0.00 3.72
193 194 1.069906 GGTTGTTGATCGCTCACACAC 60.070 52.381 0.00 0.00 0.00 3.82
194 195 1.202639 AGGTTGTTGATCGCTCACACA 60.203 47.619 0.00 0.00 0.00 3.72
195 196 1.512926 AGGTTGTTGATCGCTCACAC 58.487 50.000 0.00 0.00 0.00 3.82
196 197 2.930887 GCTAGGTTGTTGATCGCTCACA 60.931 50.000 0.00 0.00 0.00 3.58
197 198 1.661112 GCTAGGTTGTTGATCGCTCAC 59.339 52.381 0.00 0.00 0.00 3.51
198 199 1.405526 GGCTAGGTTGTTGATCGCTCA 60.406 52.381 0.00 0.00 0.00 4.26
199 200 1.291132 GGCTAGGTTGTTGATCGCTC 58.709 55.000 0.00 0.00 0.00 5.03
200 201 0.613260 TGGCTAGGTTGTTGATCGCT 59.387 50.000 0.00 0.00 0.00 4.93
201 202 1.448985 TTGGCTAGGTTGTTGATCGC 58.551 50.000 0.00 0.00 0.00 4.58
202 203 4.497473 TTTTTGGCTAGGTTGTTGATCG 57.503 40.909 0.00 0.00 0.00 3.69
245 246 6.378848 TCAAGTTTAGTGGCTAGGTTGTTTTT 59.621 34.615 0.00 0.00 0.00 1.94
246 247 5.889289 TCAAGTTTAGTGGCTAGGTTGTTTT 59.111 36.000 0.00 0.00 0.00 2.43
247 248 5.442391 TCAAGTTTAGTGGCTAGGTTGTTT 58.558 37.500 0.00 0.00 0.00 2.83
248 249 5.043737 TCAAGTTTAGTGGCTAGGTTGTT 57.956 39.130 0.00 0.00 0.00 2.83
249 250 4.642429 CTCAAGTTTAGTGGCTAGGTTGT 58.358 43.478 0.00 0.00 0.00 3.32
250 251 3.437049 GCTCAAGTTTAGTGGCTAGGTTG 59.563 47.826 0.00 0.00 0.00 3.77
251 252 3.072476 TGCTCAAGTTTAGTGGCTAGGTT 59.928 43.478 0.00 0.00 0.00 3.50
252 253 2.637872 TGCTCAAGTTTAGTGGCTAGGT 59.362 45.455 0.00 0.00 0.00 3.08
253 254 3.265791 CTGCTCAAGTTTAGTGGCTAGG 58.734 50.000 0.00 0.00 0.00 3.02
254 255 3.265791 CCTGCTCAAGTTTAGTGGCTAG 58.734 50.000 0.00 0.00 0.00 3.42
255 256 2.615493 GCCTGCTCAAGTTTAGTGGCTA 60.615 50.000 12.75 0.00 34.85 3.93
256 257 1.884067 GCCTGCTCAAGTTTAGTGGCT 60.884 52.381 12.75 0.00 34.85 4.75
257 258 0.523519 GCCTGCTCAAGTTTAGTGGC 59.476 55.000 7.23 7.23 0.00 5.01
258 259 0.798776 CGCCTGCTCAAGTTTAGTGG 59.201 55.000 0.00 0.00 0.00 4.00
259 260 0.166814 GCGCCTGCTCAAGTTTAGTG 59.833 55.000 0.00 0.00 38.39 2.74
260 261 0.250295 TGCGCCTGCTCAAGTTTAGT 60.250 50.000 4.18 0.00 43.34 2.24
261 262 0.445436 CTGCGCCTGCTCAAGTTTAG 59.555 55.000 4.18 0.00 43.34 1.85
262 263 0.034756 TCTGCGCCTGCTCAAGTTTA 59.965 50.000 4.18 0.00 43.34 2.01
263 264 0.607489 ATCTGCGCCTGCTCAAGTTT 60.607 50.000 4.18 0.00 43.34 2.66
264 265 1.002868 ATCTGCGCCTGCTCAAGTT 60.003 52.632 4.18 0.00 43.34 2.66
265 266 1.744368 CATCTGCGCCTGCTCAAGT 60.744 57.895 4.18 0.00 43.34 3.16
266 267 1.703438 GACATCTGCGCCTGCTCAAG 61.703 60.000 4.18 0.00 43.34 3.02
267 268 1.742880 GACATCTGCGCCTGCTCAA 60.743 57.895 4.18 0.00 43.34 3.02
268 269 2.125391 GACATCTGCGCCTGCTCA 60.125 61.111 4.18 0.00 43.34 4.26
269 270 2.894387 GGACATCTGCGCCTGCTC 60.894 66.667 4.18 0.98 43.34 4.26
270 271 3.709633 TGGACATCTGCGCCTGCT 61.710 61.111 4.18 0.00 43.34 4.24
271 272 3.503363 GTGGACATCTGCGCCTGC 61.503 66.667 4.18 0.00 43.20 4.85
272 273 2.104859 CAGTGGACATCTGCGCCTG 61.105 63.158 4.18 2.06 0.00 4.85
273 274 2.116983 AACAGTGGACATCTGCGCCT 62.117 55.000 4.18 0.00 36.50 5.52
274 275 0.391130 TAACAGTGGACATCTGCGCC 60.391 55.000 4.18 0.00 36.50 6.53
275 276 0.721718 GTAACAGTGGACATCTGCGC 59.278 55.000 0.00 0.00 36.50 6.09
276 277 2.370281 AGTAACAGTGGACATCTGCG 57.630 50.000 0.00 0.00 36.50 5.18
277 278 4.811557 GGATTAGTAACAGTGGACATCTGC 59.188 45.833 0.00 0.00 36.50 4.26
278 279 6.227298 AGGATTAGTAACAGTGGACATCTG 57.773 41.667 0.00 0.00 38.68 2.90
279 280 7.015682 CCATAGGATTAGTAACAGTGGACATCT 59.984 40.741 0.00 0.00 0.00 2.90
280 281 7.155328 CCATAGGATTAGTAACAGTGGACATC 58.845 42.308 0.00 0.00 0.00 3.06
281 282 6.464465 GCCATAGGATTAGTAACAGTGGACAT 60.464 42.308 0.00 0.00 0.00 3.06
282 283 5.163343 GCCATAGGATTAGTAACAGTGGACA 60.163 44.000 0.00 0.00 0.00 4.02
283 284 5.298347 GCCATAGGATTAGTAACAGTGGAC 58.702 45.833 0.00 0.00 0.00 4.02
284 285 4.038763 CGCCATAGGATTAGTAACAGTGGA 59.961 45.833 0.00 0.00 0.00 4.02
285 286 4.202223 ACGCCATAGGATTAGTAACAGTGG 60.202 45.833 0.00 0.00 0.00 4.00
286 287 4.945246 ACGCCATAGGATTAGTAACAGTG 58.055 43.478 0.00 0.00 0.00 3.66
287 288 5.010415 GGTACGCCATAGGATTAGTAACAGT 59.990 44.000 0.00 0.00 34.09 3.55
288 289 5.467705 GGTACGCCATAGGATTAGTAACAG 58.532 45.833 0.00 0.00 34.09 3.16
289 290 4.281688 GGGTACGCCATAGGATTAGTAACA 59.718 45.833 0.00 0.00 36.17 2.41
290 291 4.525874 AGGGTACGCCATAGGATTAGTAAC 59.474 45.833 6.27 0.00 36.17 2.50
291 292 4.744237 AGGGTACGCCATAGGATTAGTAA 58.256 43.478 6.27 0.00 36.17 2.24
292 293 4.393239 AGGGTACGCCATAGGATTAGTA 57.607 45.455 6.27 0.00 36.17 1.82
293 294 3.255634 AGGGTACGCCATAGGATTAGT 57.744 47.619 6.27 0.00 36.17 2.24
294 295 5.733620 TTTAGGGTACGCCATAGGATTAG 57.266 43.478 6.27 0.00 32.14 1.73
295 296 6.497624 TTTTTAGGGTACGCCATAGGATTA 57.502 37.500 6.27 0.00 32.14 1.75
296 297 5.376756 TTTTTAGGGTACGCCATAGGATT 57.623 39.130 6.27 0.00 32.14 3.01
328 329 2.165641 TCATTCACCTGTGTAGCCGTAG 59.834 50.000 0.00 0.00 0.00 3.51
329 330 2.172679 TCATTCACCTGTGTAGCCGTA 58.827 47.619 0.00 0.00 0.00 4.02
330 331 0.973632 TCATTCACCTGTGTAGCCGT 59.026 50.000 0.00 0.00 0.00 5.68
331 332 1.935873 CATCATTCACCTGTGTAGCCG 59.064 52.381 0.00 0.00 0.00 5.52
332 333 1.672881 GCATCATTCACCTGTGTAGCC 59.327 52.381 0.00 0.00 0.00 3.93
333 334 2.636830 AGCATCATTCACCTGTGTAGC 58.363 47.619 0.00 0.00 0.00 3.58
334 335 4.272018 GCTTAGCATCATTCACCTGTGTAG 59.728 45.833 0.00 0.00 0.00 2.74
335 336 4.080919 AGCTTAGCATCATTCACCTGTGTA 60.081 41.667 7.07 0.00 0.00 2.90
336 337 3.012518 GCTTAGCATCATTCACCTGTGT 58.987 45.455 0.00 0.00 0.00 3.72
337 338 3.276857 AGCTTAGCATCATTCACCTGTG 58.723 45.455 7.07 0.00 0.00 3.66
338 339 3.641434 AGCTTAGCATCATTCACCTGT 57.359 42.857 7.07 0.00 0.00 4.00
339 340 6.261118 GTTTTAGCTTAGCATCATTCACCTG 58.739 40.000 7.07 0.00 0.00 4.00
340 341 5.358160 GGTTTTAGCTTAGCATCATTCACCT 59.642 40.000 7.07 0.00 0.00 4.00
341 342 5.125417 TGGTTTTAGCTTAGCATCATTCACC 59.875 40.000 7.07 3.70 0.00 4.02
342 343 6.194796 TGGTTTTAGCTTAGCATCATTCAC 57.805 37.500 7.07 0.00 0.00 3.18
343 344 6.832520 TTGGTTTTAGCTTAGCATCATTCA 57.167 33.333 7.07 0.00 0.00 2.57
344 345 7.063426 GGTTTTGGTTTTAGCTTAGCATCATTC 59.937 37.037 7.07 0.00 0.00 2.67
345 346 6.873605 GGTTTTGGTTTTAGCTTAGCATCATT 59.126 34.615 7.07 0.00 0.00 2.57
346 347 6.398095 GGTTTTGGTTTTAGCTTAGCATCAT 58.602 36.000 7.07 0.00 0.00 2.45
347 348 5.563867 CGGTTTTGGTTTTAGCTTAGCATCA 60.564 40.000 7.07 0.00 0.00 3.07
348 349 4.857037 CGGTTTTGGTTTTAGCTTAGCATC 59.143 41.667 7.07 0.00 0.00 3.91
349 350 4.279922 ACGGTTTTGGTTTTAGCTTAGCAT 59.720 37.500 7.07 0.00 0.00 3.79
350 351 3.633065 ACGGTTTTGGTTTTAGCTTAGCA 59.367 39.130 7.07 0.00 0.00 3.49
351 352 4.233123 ACGGTTTTGGTTTTAGCTTAGC 57.767 40.909 0.00 0.00 0.00 3.09
352 353 4.443063 GCAACGGTTTTGGTTTTAGCTTAG 59.557 41.667 0.00 0.00 0.00 2.18
353 354 4.142227 TGCAACGGTTTTGGTTTTAGCTTA 60.142 37.500 0.00 0.00 0.00 3.09
354 355 3.191669 GCAACGGTTTTGGTTTTAGCTT 58.808 40.909 0.00 0.00 0.00 3.74
355 356 2.166664 TGCAACGGTTTTGGTTTTAGCT 59.833 40.909 0.00 0.00 0.00 3.32
356 357 2.541556 TGCAACGGTTTTGGTTTTAGC 58.458 42.857 0.00 0.00 0.00 3.09
357 358 3.927142 TGTTGCAACGGTTTTGGTTTTAG 59.073 39.130 23.79 0.00 0.00 1.85
358 359 3.921677 TGTTGCAACGGTTTTGGTTTTA 58.078 36.364 23.79 0.00 0.00 1.52
359 360 2.767505 TGTTGCAACGGTTTTGGTTTT 58.232 38.095 23.79 0.00 0.00 2.43
360 361 2.457366 TGTTGCAACGGTTTTGGTTT 57.543 40.000 23.79 0.00 0.00 3.27
361 362 2.457366 TTGTTGCAACGGTTTTGGTT 57.543 40.000 23.79 0.00 0.00 3.67
362 363 2.070028 GTTTGTTGCAACGGTTTTGGT 58.930 42.857 23.79 0.00 0.00 3.67
363 364 1.059835 CGTTTGTTGCAACGGTTTTGG 59.940 47.619 23.79 6.28 38.61 3.28
364 365 1.721926 ACGTTTGTTGCAACGGTTTTG 59.278 42.857 23.79 13.56 45.72 2.44
365 366 2.067414 ACGTTTGTTGCAACGGTTTT 57.933 40.000 23.79 6.08 45.72 2.43
366 367 2.067414 AACGTTTGTTGCAACGGTTT 57.933 40.000 23.79 9.95 45.72 3.27
367 368 2.067414 AAACGTTTGTTGCAACGGTT 57.933 40.000 23.79 19.89 46.05 4.44
368 369 1.619983 GAAACGTTTGTTGCAACGGT 58.380 45.000 23.79 15.62 45.07 4.83
369 370 0.563857 CGAAACGTTTGTTGCAACGG 59.436 50.000 23.79 15.02 45.72 4.44
370 371 0.045419 GCGAAACGTTTGTTGCAACG 60.045 50.000 23.79 15.61 46.72 4.10
371 372 0.985549 TGCGAAACGTTTGTTGCAAC 59.014 45.000 22.83 22.83 38.62 4.17
372 373 1.263776 CTGCGAAACGTTTGTTGCAA 58.736 45.000 20.10 0.00 36.80 4.08
373 374 1.136872 GCTGCGAAACGTTTGTTGCA 61.137 50.000 20.10 21.90 38.62 4.08
374 375 1.553185 GCTGCGAAACGTTTGTTGC 59.447 52.632 20.10 18.65 38.62 4.17
375 376 0.248458 AGGCTGCGAAACGTTTGTTG 60.248 50.000 20.10 9.11 38.62 3.33
376 377 0.454196 AAGGCTGCGAAACGTTTGTT 59.546 45.000 20.10 0.00 40.98 2.83
377 378 0.454196 AAAGGCTGCGAAACGTTTGT 59.546 45.000 20.10 0.00 0.00 2.83
378 379 2.392933 TAAAGGCTGCGAAACGTTTG 57.607 45.000 20.10 11.75 0.00 2.93
379 380 3.305110 CATTAAAGGCTGCGAAACGTTT 58.695 40.909 14.57 14.57 0.00 3.60
380 381 2.920647 GCATTAAAGGCTGCGAAACGTT 60.921 45.455 0.00 0.00 0.00 3.99
381 382 1.401018 GCATTAAAGGCTGCGAAACGT 60.401 47.619 0.00 0.00 0.00 3.99
382 383 1.259316 GCATTAAAGGCTGCGAAACG 58.741 50.000 0.00 0.00 0.00 3.60
383 384 2.253603 CTGCATTAAAGGCTGCGAAAC 58.746 47.619 0.00 0.00 41.32 2.78
384 385 1.402720 GCTGCATTAAAGGCTGCGAAA 60.403 47.619 15.10 0.00 44.27 3.46
385 386 0.171007 GCTGCATTAAAGGCTGCGAA 59.829 50.000 15.10 0.00 44.27 4.70
386 387 1.802636 GCTGCATTAAAGGCTGCGA 59.197 52.632 15.10 0.00 44.27 5.10
387 388 4.389772 GCTGCATTAAAGGCTGCG 57.610 55.556 15.10 3.54 44.27 5.18
389 390 2.288948 TGGTTTGCTGCATTAAAGGCTG 60.289 45.455 1.84 4.93 0.00 4.85
390 391 1.969923 TGGTTTGCTGCATTAAAGGCT 59.030 42.857 1.84 0.00 0.00 4.58
391 392 2.068519 GTGGTTTGCTGCATTAAAGGC 58.931 47.619 1.84 0.00 0.00 4.35
392 393 2.327568 CGTGGTTTGCTGCATTAAAGG 58.672 47.619 1.84 0.00 0.00 3.11
393 394 2.327568 CCGTGGTTTGCTGCATTAAAG 58.672 47.619 1.84 0.00 0.00 1.85
394 395 1.604185 GCCGTGGTTTGCTGCATTAAA 60.604 47.619 1.84 0.00 0.00 1.52
395 396 0.038709 GCCGTGGTTTGCTGCATTAA 60.039 50.000 1.84 0.00 0.00 1.40
396 397 1.583986 GCCGTGGTTTGCTGCATTA 59.416 52.632 1.84 0.00 0.00 1.90
397 398 2.339712 GCCGTGGTTTGCTGCATT 59.660 55.556 1.84 0.00 0.00 3.56
398 399 3.683937 GGCCGTGGTTTGCTGCAT 61.684 61.111 1.84 0.00 0.00 3.96
401 402 3.365265 GAGGGCCGTGGTTTGCTG 61.365 66.667 0.65 0.00 0.00 4.41
402 403 4.660938 GGAGGGCCGTGGTTTGCT 62.661 66.667 0.65 0.00 0.00 3.91
403 404 4.660938 AGGAGGGCCGTGGTTTGC 62.661 66.667 0.65 0.00 39.96 3.68
404 405 2.672996 CAGGAGGGCCGTGGTTTG 60.673 66.667 0.65 0.00 39.96 2.93
405 406 2.852075 TCAGGAGGGCCGTGGTTT 60.852 61.111 0.65 0.00 39.96 3.27
406 407 3.637273 GTCAGGAGGGCCGTGGTT 61.637 66.667 0.65 0.00 39.96 3.67
407 408 4.640690 AGTCAGGAGGGCCGTGGT 62.641 66.667 0.65 0.00 39.96 4.16
408 409 2.856039 TAGAGTCAGGAGGGCCGTGG 62.856 65.000 0.65 0.00 39.96 4.94
409 410 0.757188 ATAGAGTCAGGAGGGCCGTG 60.757 60.000 0.65 0.00 39.96 4.94
410 411 0.032017 AATAGAGTCAGGAGGGCCGT 60.032 55.000 0.00 0.00 39.96 5.68
411 412 1.069358 GAAATAGAGTCAGGAGGGCCG 59.931 57.143 0.00 0.00 39.96 6.13
412 413 2.367241 GAGAAATAGAGTCAGGAGGGCC 59.633 54.545 0.00 0.00 0.00 5.80
413 414 3.034635 TGAGAAATAGAGTCAGGAGGGC 58.965 50.000 0.00 0.00 0.00 5.19
414 415 7.893302 AGTATATGAGAAATAGAGTCAGGAGGG 59.107 40.741 0.00 0.00 0.00 4.30
415 416 8.877864 AGTATATGAGAAATAGAGTCAGGAGG 57.122 38.462 0.00 0.00 0.00 4.30
503 504 3.430556 GTGCCGTGTTTTCTGTTGTTTTT 59.569 39.130 0.00 0.00 0.00 1.94
504 505 2.990514 GTGCCGTGTTTTCTGTTGTTTT 59.009 40.909 0.00 0.00 0.00 2.43
505 506 2.601804 GTGCCGTGTTTTCTGTTGTTT 58.398 42.857 0.00 0.00 0.00 2.83
506 507 1.135228 GGTGCCGTGTTTTCTGTTGTT 60.135 47.619 0.00 0.00 0.00 2.83
507 508 0.454196 GGTGCCGTGTTTTCTGTTGT 59.546 50.000 0.00 0.00 0.00 3.32
508 509 0.453793 TGGTGCCGTGTTTTCTGTTG 59.546 50.000 0.00 0.00 0.00 3.33
509 510 1.178276 TTGGTGCCGTGTTTTCTGTT 58.822 45.000 0.00 0.00 0.00 3.16
510 511 1.336755 GATTGGTGCCGTGTTTTCTGT 59.663 47.619 0.00 0.00 0.00 3.41
511 512 1.608590 AGATTGGTGCCGTGTTTTCTG 59.391 47.619 0.00 0.00 0.00 3.02
512 513 1.981256 AGATTGGTGCCGTGTTTTCT 58.019 45.000 0.00 0.00 0.00 2.52
513 514 2.034053 TGAAGATTGGTGCCGTGTTTTC 59.966 45.455 0.00 0.00 0.00 2.29
514 515 2.028130 TGAAGATTGGTGCCGTGTTTT 58.972 42.857 0.00 0.00 0.00 2.43
515 516 1.336755 GTGAAGATTGGTGCCGTGTTT 59.663 47.619 0.00 0.00 0.00 2.83
516 517 0.951558 GTGAAGATTGGTGCCGTGTT 59.048 50.000 0.00 0.00 0.00 3.32
517 518 1.227999 CGTGAAGATTGGTGCCGTGT 61.228 55.000 0.00 0.00 0.00 4.49
564 565 9.860898 GTGCCTGAAAATGAAAATTCTAGTTAT 57.139 29.630 0.00 0.00 0.00 1.89
574 587 2.545532 CCTGCGTGCCTGAAAATGAAAA 60.546 45.455 0.00 0.00 0.00 2.29
580 593 3.659092 CGCCTGCGTGCCTGAAAA 61.659 61.111 2.83 0.00 34.35 2.29
589 602 2.102357 CGTCAGTATCGCCTGCGT 59.898 61.111 11.68 1.90 40.74 5.24
596 609 3.186409 CCCCAAAATATGCGTCAGTATCG 59.814 47.826 0.00 0.00 0.00 2.92
644 657 8.475639 AGTGTCGTCATTGGTATACTTCTATTT 58.524 33.333 2.25 0.00 0.00 1.40
674 687 1.477030 GGGTCGCACGCACGTATAAG 61.477 60.000 0.00 0.00 0.00 1.73
675 688 1.516821 GGGTCGCACGCACGTATAA 60.517 57.895 0.00 0.00 0.00 0.98
716 732 4.032960 TGGAGGGTCAACGTACTACTTA 57.967 45.455 0.00 0.00 0.00 2.24
722 741 1.549170 ACTCATGGAGGGTCAACGTAC 59.451 52.381 0.00 0.00 33.35 3.67
760 779 9.561069 ACTAGCTTTGAGATAACTTGAAGAAAA 57.439 29.630 0.00 0.00 0.00 2.29
805 824 2.108075 TGATGTTTTTCCTGAGGGCTGA 59.892 45.455 0.00 0.00 0.00 4.26
846 865 1.110518 TGATAGGCGCCCGTGTATCA 61.111 55.000 24.57 24.57 31.03 2.15
848 867 0.685097 AATGATAGGCGCCCGTGTAT 59.315 50.000 26.15 14.77 0.00 2.29
874 893 6.980577 AGAAATTGTTTATGGAGGGGATACA 58.019 36.000 0.00 0.00 39.74 2.29
882 901 9.846248 CAAGGAGTTTAGAAATTGTTTATGGAG 57.154 33.333 0.00 0.00 0.00 3.86
910 929 1.149782 AGGTGACCTGAGGGAGAGGA 61.150 60.000 1.77 0.00 34.37 3.71
931 950 4.019411 TGGTCTGAGCAATGGAAGATTGTA 60.019 41.667 7.15 0.00 0.00 2.41
976 995 4.563580 GGCTACTGGATTGTGAGTTCTTGA 60.564 45.833 0.00 0.00 0.00 3.02
1021 1040 0.320771 GCGAAGAGGAGGAACAGCAA 60.321 55.000 0.00 0.00 0.00 3.91
1142 1161 1.817520 TCGGCGTATGTGGCATTGG 60.818 57.895 6.85 0.00 0.00 3.16
1176 1195 1.841302 TTTGCCTGACGAGGATGGCT 61.841 55.000 0.00 0.00 42.93 4.75
1383 1402 0.617413 CCTTGGTGAGCTGGACTGAT 59.383 55.000 0.00 0.00 0.00 2.90
1386 1405 2.114616 CTATCCTTGGTGAGCTGGACT 58.885 52.381 0.00 0.00 0.00 3.85
1404 1423 4.720046 AGTCTCGGAGTATGAGATTGCTA 58.280 43.478 4.69 0.00 43.82 3.49
1405 1424 3.561143 AGTCTCGGAGTATGAGATTGCT 58.439 45.455 4.69 0.00 43.82 3.91
1434 1453 1.691195 TTGTGGACCAGACCAGCGAA 61.691 55.000 0.00 0.00 40.85 4.70
1471 1490 1.352156 GCCAGATTCACACCGACGAC 61.352 60.000 0.00 0.00 0.00 4.34
1488 1507 4.643387 AGGTTGCCGGTGTCAGCC 62.643 66.667 1.90 4.09 35.39 4.85
1494 1513 1.450312 GAGGATCAGGTTGCCGGTG 60.450 63.158 1.90 0.00 33.17 4.94
1497 1516 0.807667 CGAAGAGGATCAGGTTGCCG 60.808 60.000 0.00 0.00 37.82 5.69
1500 1519 3.118992 TCACATCGAAGAGGATCAGGTTG 60.119 47.826 0.00 0.00 43.16 3.77
1545 1564 0.034337 TGTCGGTAGGGTGCTCAAAC 59.966 55.000 0.00 0.00 0.00 2.93
1566 1585 0.815615 GCGACTGCCCAATAAGGAGG 60.816 60.000 0.00 0.00 41.22 4.30
2025 2044 2.026822 ACTACATTGCCCCTCTGAACAG 60.027 50.000 0.00 0.00 0.00 3.16
2067 2086 0.246912 GCTGATCGAAAAGTGCGTCG 60.247 55.000 0.00 0.00 38.62 5.12
2071 2090 1.442769 TCCAGCTGATCGAAAAGTGC 58.557 50.000 17.39 0.00 0.00 4.40
2080 2099 1.596477 GCCGGTCATCCAGCTGATC 60.596 63.158 17.39 0.00 34.54 2.92
2081 2100 1.913951 TTGCCGGTCATCCAGCTGAT 61.914 55.000 17.39 3.92 37.94 2.90
2112 2131 0.706433 ATGGAGTTGCTGGGGAACAT 59.294 50.000 4.90 0.00 0.00 2.71
2341 2360 7.587037 AGTTATATCCAATGGTTCCATGTTG 57.413 36.000 5.02 2.10 0.00 3.33
2454 2473 3.304123 GCACGCAGATGAGTACTACTAGG 60.304 52.174 0.00 0.00 0.00 3.02
2511 2530 1.201429 ACGGGTCCTCCTCTTGCATT 61.201 55.000 0.00 0.00 0.00 3.56
2526 2545 1.463674 CAGGAATCCCTTTGAACGGG 58.536 55.000 0.00 0.00 42.02 5.28
2532 2551 1.406903 GCATCCCAGGAATCCCTTTG 58.593 55.000 0.00 0.00 42.02 2.77
2643 2662 5.006649 GGCAATTTTGACAGTTCCAAGTTTC 59.993 40.000 0.00 0.00 35.83 2.78
2682 2701 4.043310 TCTTCTTTCCCATGTCCAATGTCT 59.957 41.667 0.00 0.00 0.00 3.41
2700 2719 3.274288 GACTTCGGCCATGAATTCTTCT 58.726 45.455 2.24 0.00 0.00 2.85
2805 2824 7.026562 CCAGAGAACTATTACTCATATGCTCG 58.973 42.308 0.00 0.00 35.83 5.03
3288 3307 4.650734 TCTCTGCACCATGTAATTGAACA 58.349 39.130 0.00 0.00 0.00 3.18
3465 3484 2.136878 CGGGGACAGAGGGGATGAG 61.137 68.421 0.00 0.00 0.00 2.90
3685 3713 9.959721 AGTACATATTAGTGTGGAAAACAGAAT 57.040 29.630 0.00 0.00 40.26 2.40
3708 3736 1.547372 CTTTTTCGGACGGAGGGAGTA 59.453 52.381 0.00 0.00 0.00 2.59
3709 3737 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
3710 3738 1.019805 GCTTTTTCGGACGGAGGGAG 61.020 60.000 0.00 0.00 0.00 4.30
3711 3739 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
3712 3740 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
3713 3741 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
3714 3742 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
3715 3743 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
3716 3744 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
3717 3745 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
3718 3746 1.535896 GAGGGACAAGCTTTTTCGGAC 59.464 52.381 0.00 0.00 0.00 4.79
3719 3747 1.142060 TGAGGGACAAGCTTTTTCGGA 59.858 47.619 0.00 0.00 0.00 4.55
3720 3748 1.604604 TGAGGGACAAGCTTTTTCGG 58.395 50.000 0.00 0.00 0.00 4.30
3721 3749 3.708563 TTTGAGGGACAAGCTTTTTCG 57.291 42.857 0.00 0.00 39.77 3.46
3722 3750 4.039124 TCCATTTGAGGGACAAGCTTTTTC 59.961 41.667 0.00 0.00 39.77 2.29
3723 3751 3.966665 TCCATTTGAGGGACAAGCTTTTT 59.033 39.130 0.00 0.00 39.77 1.94
3724 3752 3.575805 TCCATTTGAGGGACAAGCTTTT 58.424 40.909 0.00 0.00 39.77 2.27
3725 3753 3.243359 TCCATTTGAGGGACAAGCTTT 57.757 42.857 0.00 0.00 39.77 3.51
3726 3754 2.978156 TCCATTTGAGGGACAAGCTT 57.022 45.000 0.00 0.00 39.77 3.74
3727 3755 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
3728 3756 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
3729 3757 3.947834 GGTACATCCATTTGAGGGACAAG 59.052 47.826 0.00 0.00 40.49 3.16
3730 3758 3.591527 AGGTACATCCATTTGAGGGACAA 59.408 43.478 0.00 0.00 40.49 3.18
3731 3759 3.189606 AGGTACATCCATTTGAGGGACA 58.810 45.455 0.00 0.00 40.49 4.02
3732 3760 3.933861 AGGTACATCCATTTGAGGGAC 57.066 47.619 0.00 0.00 37.90 4.46
3733 3761 3.391296 GCTAGGTACATCCATTTGAGGGA 59.609 47.826 0.00 0.00 39.02 4.20
3734 3762 3.136443 TGCTAGGTACATCCATTTGAGGG 59.864 47.826 0.00 0.00 39.02 4.30
3735 3763 4.130118 GTGCTAGGTACATCCATTTGAGG 58.870 47.826 0.00 0.00 39.02 3.86
3736 3764 4.130118 GGTGCTAGGTACATCCATTTGAG 58.870 47.826 0.00 0.00 39.02 3.02
3737 3765 3.521531 TGGTGCTAGGTACATCCATTTGA 59.478 43.478 0.00 0.00 39.02 2.69
3738 3766 3.884895 TGGTGCTAGGTACATCCATTTG 58.115 45.455 0.00 0.00 39.02 2.32
3739 3767 4.018415 ACTTGGTGCTAGGTACATCCATTT 60.018 41.667 0.00 0.00 39.02 2.32
3740 3768 3.523564 ACTTGGTGCTAGGTACATCCATT 59.476 43.478 0.00 0.00 39.02 3.16
3741 3769 3.115390 ACTTGGTGCTAGGTACATCCAT 58.885 45.455 0.00 0.00 39.02 3.41
3742 3770 2.546899 ACTTGGTGCTAGGTACATCCA 58.453 47.619 0.00 0.00 39.02 3.41
3743 3771 3.629142 AACTTGGTGCTAGGTACATCC 57.371 47.619 0.00 0.00 0.00 3.51
3744 3772 5.109903 CACTAACTTGGTGCTAGGTACATC 58.890 45.833 0.00 0.00 0.00 3.06
3745 3773 5.086104 CACTAACTTGGTGCTAGGTACAT 57.914 43.478 0.00 0.00 0.00 2.29
3746 3774 4.530710 CACTAACTTGGTGCTAGGTACA 57.469 45.455 0.00 0.00 0.00 2.90
3755 3783 5.986135 GGATGTATCTAGCACTAACTTGGTG 59.014 44.000 0.97 0.97 37.70 4.17
3756 3784 5.661312 TGGATGTATCTAGCACTAACTTGGT 59.339 40.000 0.00 0.00 0.00 3.67
3757 3785 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
3758 3786 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
3759 3787 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
3760 3788 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
3761 3789 7.386299 CCTCAAATGGATGTATCTAGCACTAAC 59.614 40.741 0.00 0.00 0.00 2.34
3762 3790 7.445121 CCTCAAATGGATGTATCTAGCACTAA 58.555 38.462 0.00 0.00 0.00 2.24
3763 3791 6.014242 CCCTCAAATGGATGTATCTAGCACTA 60.014 42.308 0.00 0.00 0.00 2.74
3764 3792 5.221803 CCCTCAAATGGATGTATCTAGCACT 60.222 44.000 0.00 0.00 0.00 4.40
3765 3793 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
3766 3794 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
3767 3795 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
3768 3796 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
3769 3797 6.688922 GCTTGTCCCTCAAATGGATGTATCTA 60.689 42.308 0.00 0.00 35.48 1.98
3770 3798 5.688807 CTTGTCCCTCAAATGGATGTATCT 58.311 41.667 0.00 0.00 35.48 1.98
3771 3799 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
3772 3800 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
3773 3801 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
3774 3802 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
3775 3803 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
3776 3804 3.094572 CAAGCTTGTCCCTCAAATGGAT 58.905 45.455 18.65 0.00 35.48 3.41
3777 3805 2.517959 CAAGCTTGTCCCTCAAATGGA 58.482 47.619 18.65 0.00 35.48 3.41
3778 3806 1.547372 CCAAGCTTGTCCCTCAAATGG 59.453 52.381 24.35 1.81 35.48 3.16
3779 3807 1.547372 CCCAAGCTTGTCCCTCAAATG 59.453 52.381 24.35 5.47 35.48 2.32
3780 3808 1.428912 TCCCAAGCTTGTCCCTCAAAT 59.571 47.619 24.35 0.00 35.48 2.32
3781 3809 0.850100 TCCCAAGCTTGTCCCTCAAA 59.150 50.000 24.35 0.00 35.48 2.69
3782 3810 0.110486 GTCCCAAGCTTGTCCCTCAA 59.890 55.000 24.35 0.00 34.61 3.02
3783 3811 1.059584 TGTCCCAAGCTTGTCCCTCA 61.060 55.000 24.35 12.85 0.00 3.86
3784 3812 0.110486 TTGTCCCAAGCTTGTCCCTC 59.890 55.000 24.35 10.65 0.00 4.30
3785 3813 0.111253 CTTGTCCCAAGCTTGTCCCT 59.889 55.000 24.35 0.00 0.00 4.20
3786 3814 0.178990 ACTTGTCCCAAGCTTGTCCC 60.179 55.000 24.35 11.81 0.00 4.46
3787 3815 1.692411 AACTTGTCCCAAGCTTGTCC 58.308 50.000 24.35 12.15 0.00 4.02
3788 3816 3.381590 AGAAAACTTGTCCCAAGCTTGTC 59.618 43.478 24.35 14.49 0.00 3.18
3789 3817 3.365472 AGAAAACTTGTCCCAAGCTTGT 58.635 40.909 24.35 2.04 0.00 3.16
3790 3818 3.548818 CGAGAAAACTTGTCCCAAGCTTG 60.549 47.826 19.93 19.93 0.00 4.01
3791 3819 2.618709 CGAGAAAACTTGTCCCAAGCTT 59.381 45.455 0.00 0.00 0.00 3.74
3792 3820 2.222027 CGAGAAAACTTGTCCCAAGCT 58.778 47.619 3.96 0.00 0.00 3.74
3793 3821 1.266989 CCGAGAAAACTTGTCCCAAGC 59.733 52.381 3.96 0.00 0.00 4.01
3794 3822 2.548480 GTCCGAGAAAACTTGTCCCAAG 59.452 50.000 2.54 2.54 0.00 3.61
3795 3823 2.567985 GTCCGAGAAAACTTGTCCCAA 58.432 47.619 0.00 0.00 0.00 4.12
3796 3824 1.539496 CGTCCGAGAAAACTTGTCCCA 60.539 52.381 0.00 0.00 0.00 4.37
3797 3825 1.145803 CGTCCGAGAAAACTTGTCCC 58.854 55.000 0.00 0.00 0.00 4.46
3798 3826 1.145803 CCGTCCGAGAAAACTTGTCC 58.854 55.000 0.00 0.00 0.00 4.02
3799 3827 2.059541 CTCCGTCCGAGAAAACTTGTC 58.940 52.381 0.00 0.00 41.63 3.18
3800 3828 1.270147 CCTCCGTCCGAGAAAACTTGT 60.270 52.381 0.00 0.00 41.63 3.16
3801 3829 1.429463 CCTCCGTCCGAGAAAACTTG 58.571 55.000 0.00 0.00 41.63 3.16
3802 3830 0.320697 CCCTCCGTCCGAGAAAACTT 59.679 55.000 0.00 0.00 41.63 2.66
3803 3831 0.541296 TCCCTCCGTCCGAGAAAACT 60.541 55.000 0.00 0.00 41.63 2.66
3804 3832 0.108756 CTCCCTCCGTCCGAGAAAAC 60.109 60.000 0.00 0.00 41.63 2.43
3805 3833 0.541296 ACTCCCTCCGTCCGAGAAAA 60.541 55.000 0.00 0.00 41.63 2.29
3806 3834 0.329261 TACTCCCTCCGTCCGAGAAA 59.671 55.000 0.00 0.00 41.63 2.52
3807 3835 0.549950 ATACTCCCTCCGTCCGAGAA 59.450 55.000 0.00 0.00 41.63 2.87
3808 3836 0.549950 AATACTCCCTCCGTCCGAGA 59.450 55.000 0.00 0.00 41.63 4.04
3809 3837 2.267174 TAATACTCCCTCCGTCCGAG 57.733 55.000 0.00 0.00 38.46 4.63
3810 3838 2.158564 ACATAATACTCCCTCCGTCCGA 60.159 50.000 0.00 0.00 0.00 4.55
3811 3839 2.236766 ACATAATACTCCCTCCGTCCG 58.763 52.381 0.00 0.00 0.00 4.79
3812 3840 5.997384 AATACATAATACTCCCTCCGTCC 57.003 43.478 0.00 0.00 0.00 4.79
3813 3841 6.091437 CGAAATACATAATACTCCCTCCGTC 58.909 44.000 0.00 0.00 0.00 4.79
3814 3842 5.537674 ACGAAATACATAATACTCCCTCCGT 59.462 40.000 0.00 0.00 0.00 4.69
3815 3843 6.022163 ACGAAATACATAATACTCCCTCCG 57.978 41.667 0.00 0.00 0.00 4.63
3816 3844 7.215085 ACAACGAAATACATAATACTCCCTCC 58.785 38.462 0.00 0.00 0.00 4.30
3817 3845 8.658499 AACAACGAAATACATAATACTCCCTC 57.342 34.615 0.00 0.00 0.00 4.30
3883 3911 8.722480 TTGTGAAAGTGTAGGAGAATGATATG 57.278 34.615 0.00 0.00 0.00 1.78
3975 4003 8.828644 CAAATGGAAAAATTGATGTCAAACTCA 58.171 29.630 0.00 0.00 39.55 3.41
4017 4045 6.515272 AGTAATGAAGAAATTGGCACGAAT 57.485 33.333 0.00 0.00 0.00 3.34
4021 4049 6.322491 GTGGTAGTAATGAAGAAATTGGCAC 58.678 40.000 0.00 0.00 0.00 5.01
4243 4282 5.704978 TGTGCTGTTGCTTGATATAGTTTGA 59.295 36.000 0.00 0.00 40.48 2.69
4343 4399 5.989477 TGATACTAAGTTGTAGCCTTGCAT 58.011 37.500 0.00 0.00 0.00 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.