Multiple sequence alignment - TraesCS2B01G449800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G449800 chr2B 100.000 2288 0 0 1 2288 643125130 643127417 0.000000e+00 4226
1 TraesCS2B01G449800 chr2B 93.867 1712 87 10 1 1709 23892245 23890549 0.000000e+00 2564
2 TraesCS2B01G449800 chr2B 92.818 181 12 1 1814 1993 234543047 234542867 6.270000e-66 261
3 TraesCS2B01G449800 chr7D 94.954 1724 65 4 1 1711 621162320 621164034 0.000000e+00 2682
4 TraesCS2B01G449800 chr7D 93.612 1722 69 10 1 1710 568007494 568005802 0.000000e+00 2532
5 TraesCS2B01G449800 chr7D 93.031 1722 85 10 1 1709 98406302 98404603 0.000000e+00 2483
6 TraesCS2B01G449800 chr7D 87.629 291 36 0 1998 2288 254339362 254339072 2.820000e-89 339
7 TraesCS2B01G449800 chr7D 85.906 298 34 6 1996 2288 63923310 63923604 6.140000e-81 311
8 TraesCS2B01G449800 chr7D 92.857 182 12 1 1814 1994 382114188 382114369 1.740000e-66 263
9 TraesCS2B01G449800 chr1D 94.596 1721 66 7 1 1709 369900549 369902254 0.000000e+00 2638
10 TraesCS2B01G449800 chr1D 93.387 1724 78 12 1 1709 209755859 209757561 0.000000e+00 2519
11 TraesCS2B01G449800 chr1D 86.159 289 40 0 1998 2286 449223982 449223694 1.710000e-81 313
12 TraesCS2B01G449800 chr7B 94.327 1710 95 2 1 1709 494221537 494219829 0.000000e+00 2619
13 TraesCS2B01G449800 chr7B 93.913 1725 88 8 1 1710 457414289 457416011 0.000000e+00 2588
14 TraesCS2B01G449800 chr7B 93.158 1710 100 9 1 1708 389093354 389095048 0.000000e+00 2494
15 TraesCS2B01G449800 chr7B 93.160 1272 73 3 1 1259 625709247 625710517 0.000000e+00 1855
16 TraesCS2B01G449800 chr7B 86.913 298 37 2 1992 2288 450304566 450304862 1.310000e-87 333
17 TraesCS2B01G449800 chr3B 93.964 1723 87 6 1 1709 97752888 97751169 0.000000e+00 2590
18 TraesCS2B01G449800 chr6D 93.927 1729 79 8 1 1715 446604639 446602923 0.000000e+00 2588
19 TraesCS2B01G449800 chr6D 92.857 182 12 1 1814 1994 108483326 108483507 1.740000e-66 263
20 TraesCS2B01G449800 chr6B 93.939 1716 97 5 1 1711 567281098 567282811 0.000000e+00 2586
21 TraesCS2B01G449800 chr6B 86.897 290 36 2 1999 2287 16070082 16070370 7.880000e-85 324
22 TraesCS2B01G449800 chr6B 93.370 181 11 1 1814 1993 151246384 151246564 1.350000e-67 267
23 TraesCS2B01G449800 chr7A 93.732 1723 92 5 1 1710 86218360 86216641 0.000000e+00 2569
24 TraesCS2B01G449800 chr5B 93.213 1724 91 9 1 1709 351154079 351155791 0.000000e+00 2512
25 TraesCS2B01G449800 chrUn 90.272 771 40 13 949 1716 386164732 386165470 0.000000e+00 976
26 TraesCS2B01G449800 chrUn 93.407 182 11 1 1814 1994 430768623 430768804 3.750000e-68 268
27 TraesCS2B01G449800 chr2A 90.744 497 34 5 1 485 694977607 694978103 0.000000e+00 652
28 TraesCS2B01G449800 chr2A 91.463 82 7 0 1709 1790 682516003 682516084 1.860000e-21 113
29 TraesCS2B01G449800 chr4D 84.029 551 50 17 1192 1716 5246877 5246339 1.580000e-136 496
30 TraesCS2B01G449800 chr4D 93.407 182 11 1 1814 1994 123450871 123450690 3.750000e-68 268
31 TraesCS2B01G449800 chr5D 86.897 290 38 0 1999 2288 462838369 462838658 2.190000e-85 326
32 TraesCS2B01G449800 chr2D 86.986 292 34 4 1998 2288 237096464 237096752 2.190000e-85 326
33 TraesCS2B01G449800 chr2D 86.395 294 34 5 1998 2288 338328552 338328262 1.320000e-82 316
34 TraesCS2B01G449800 chr6A 85.862 290 41 0 1999 2288 44757627 44757916 2.210000e-80 309
35 TraesCS2B01G449800 chr3A 93.370 181 11 1 1814 1993 495106643 495106463 1.350000e-67 267
36 TraesCS2B01G449800 chr1B 93.370 181 11 1 1814 1993 619197194 619197014 1.350000e-67 267
37 TraesCS2B01G449800 chr1A 92.857 182 12 1 1814 1994 278519327 278519508 1.740000e-66 263


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G449800 chr2B 643125130 643127417 2287 False 4226 4226 100.000 1 2288 1 chr2B.!!$F1 2287
1 TraesCS2B01G449800 chr2B 23890549 23892245 1696 True 2564 2564 93.867 1 1709 1 chr2B.!!$R1 1708
2 TraesCS2B01G449800 chr7D 621162320 621164034 1714 False 2682 2682 94.954 1 1711 1 chr7D.!!$F3 1710
3 TraesCS2B01G449800 chr7D 568005802 568007494 1692 True 2532 2532 93.612 1 1710 1 chr7D.!!$R3 1709
4 TraesCS2B01G449800 chr7D 98404603 98406302 1699 True 2483 2483 93.031 1 1709 1 chr7D.!!$R1 1708
5 TraesCS2B01G449800 chr1D 369900549 369902254 1705 False 2638 2638 94.596 1 1709 1 chr1D.!!$F2 1708
6 TraesCS2B01G449800 chr1D 209755859 209757561 1702 False 2519 2519 93.387 1 1709 1 chr1D.!!$F1 1708
7 TraesCS2B01G449800 chr7B 494219829 494221537 1708 True 2619 2619 94.327 1 1709 1 chr7B.!!$R1 1708
8 TraesCS2B01G449800 chr7B 457414289 457416011 1722 False 2588 2588 93.913 1 1710 1 chr7B.!!$F3 1709
9 TraesCS2B01G449800 chr7B 389093354 389095048 1694 False 2494 2494 93.158 1 1708 1 chr7B.!!$F1 1707
10 TraesCS2B01G449800 chr7B 625709247 625710517 1270 False 1855 1855 93.160 1 1259 1 chr7B.!!$F4 1258
11 TraesCS2B01G449800 chr3B 97751169 97752888 1719 True 2590 2590 93.964 1 1709 1 chr3B.!!$R1 1708
12 TraesCS2B01G449800 chr6D 446602923 446604639 1716 True 2588 2588 93.927 1 1715 1 chr6D.!!$R1 1714
13 TraesCS2B01G449800 chr6B 567281098 567282811 1713 False 2586 2586 93.939 1 1711 1 chr6B.!!$F3 1710
14 TraesCS2B01G449800 chr7A 86216641 86218360 1719 True 2569 2569 93.732 1 1710 1 chr7A.!!$R1 1709
15 TraesCS2B01G449800 chr5B 351154079 351155791 1712 False 2512 2512 93.213 1 1709 1 chr5B.!!$F1 1708
16 TraesCS2B01G449800 chrUn 386164732 386165470 738 False 976 976 90.272 949 1716 1 chrUn.!!$F1 767
17 TraesCS2B01G449800 chr4D 5246339 5246877 538 True 496 496 84.029 1192 1716 1 chr4D.!!$R1 524

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
167 180 0.263172 CCTCCTCCTTAGGCTCTCCA 59.737 60.0 0.0 0.0 43.31 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2075 2135 0.038983 TGCTTTAGTGACACGCGCTA 60.039 50.0 5.73 0.0 38.54 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
164 177 1.933765 TCTTCCTCCTCCTTAGGCTCT 59.066 52.381 0.00 0.00 43.31 4.09
167 180 0.263172 CCTCCTCCTTAGGCTCTCCA 59.737 60.000 0.00 0.00 43.31 3.86
180 193 3.770040 CTCCACCGATGACCGCCA 61.770 66.667 0.00 0.00 36.84 5.69
400 413 3.544684 TCATGAGCACGGCATTAGATTT 58.455 40.909 0.00 0.00 0.00 2.17
462 475 2.104111 TCCATGGTGTTCTCGAACTTGT 59.896 45.455 12.58 0.00 41.67 3.16
637 655 3.908103 GCAGGGTGAGTAAATATAGGGGA 59.092 47.826 0.00 0.00 0.00 4.81
739 759 2.221169 GACTCCATGACTTGTGTGCAA 58.779 47.619 0.00 0.00 0.00 4.08
744 764 2.587956 CATGACTTGTGTGCAAATCGG 58.412 47.619 0.00 0.00 33.95 4.18
745 765 0.950836 TGACTTGTGTGCAAATCGGG 59.049 50.000 0.00 0.00 33.95 5.14
746 766 1.234821 GACTTGTGTGCAAATCGGGA 58.765 50.000 0.00 0.00 33.73 5.14
747 767 1.812571 GACTTGTGTGCAAATCGGGAT 59.187 47.619 0.00 0.00 33.73 3.85
748 768 3.006940 GACTTGTGTGCAAATCGGGATA 58.993 45.455 0.00 0.00 33.73 2.59
749 769 3.009723 ACTTGTGTGCAAATCGGGATAG 58.990 45.455 0.00 0.00 33.73 2.08
750 770 1.378531 TGTGTGCAAATCGGGATAGC 58.621 50.000 0.00 0.61 0.00 2.97
751 771 1.339535 TGTGTGCAAATCGGGATAGCA 60.340 47.619 0.00 5.05 32.12 3.49
752 772 1.742831 GTGTGCAAATCGGGATAGCAA 59.257 47.619 9.40 1.04 34.99 3.91
753 773 2.358898 GTGTGCAAATCGGGATAGCAAT 59.641 45.455 9.40 0.00 34.99 3.56
754 774 2.358582 TGTGCAAATCGGGATAGCAATG 59.641 45.455 9.40 0.00 34.99 2.82
755 775 2.618241 GTGCAAATCGGGATAGCAATGA 59.382 45.455 9.40 0.00 34.99 2.57
756 776 2.880268 TGCAAATCGGGATAGCAATGAG 59.120 45.455 6.33 0.00 31.80 2.90
757 777 3.141398 GCAAATCGGGATAGCAATGAGA 58.859 45.455 0.00 0.00 0.00 3.27
758 778 3.755378 GCAAATCGGGATAGCAATGAGAT 59.245 43.478 0.00 0.00 0.00 2.75
821 856 2.755469 CCTTCACCCAATGCCCGG 60.755 66.667 0.00 0.00 0.00 5.73
926 963 0.812412 AACAAGCACCGCAACTACGT 60.812 50.000 0.00 0.00 0.00 3.57
953 990 2.727336 ATCAGGAGGATGGCCCAAA 58.273 52.632 0.00 0.00 37.41 3.28
1167 1205 5.477510 GTTCATCAGATCAAGATCGGCTAT 58.522 41.667 5.48 0.00 42.48 2.97
1185 1223 3.871594 GCTATATGGTGACGTTCAAGCTT 59.128 43.478 0.00 0.00 0.00 3.74
1339 1378 3.970610 CGAGTCTGCTTTGAACATGTTTG 59.029 43.478 13.36 5.16 0.00 2.93
1449 1508 1.457303 GATGTGTGCTGTCGAAGTGTC 59.543 52.381 0.00 0.00 0.00 3.67
1560 1620 1.042559 CAGGCAACCAAACACCAGGT 61.043 55.000 0.00 0.00 40.61 4.00
1711 1771 1.284715 GCAACCAAACACGCCCTAC 59.715 57.895 0.00 0.00 0.00 3.18
1716 1776 1.004277 ACCAAACACGCCCTACATGAT 59.996 47.619 0.00 0.00 0.00 2.45
1717 1777 1.670811 CCAAACACGCCCTACATGATC 59.329 52.381 0.00 0.00 0.00 2.92
1718 1778 2.355197 CAAACACGCCCTACATGATCA 58.645 47.619 0.00 0.00 0.00 2.92
1719 1779 2.746904 CAAACACGCCCTACATGATCAA 59.253 45.455 0.00 0.00 0.00 2.57
1720 1780 2.779755 ACACGCCCTACATGATCAAA 57.220 45.000 0.00 0.00 0.00 2.69
1721 1781 2.356135 ACACGCCCTACATGATCAAAC 58.644 47.619 0.00 0.00 0.00 2.93
1722 1782 2.290008 ACACGCCCTACATGATCAAACA 60.290 45.455 0.00 0.00 0.00 2.83
1723 1783 2.746904 CACGCCCTACATGATCAAACAA 59.253 45.455 0.00 0.00 0.00 2.83
1724 1784 2.747446 ACGCCCTACATGATCAAACAAC 59.253 45.455 0.00 0.00 0.00 3.32
1725 1785 2.223021 CGCCCTACATGATCAAACAACG 60.223 50.000 0.00 0.00 0.00 4.10
1726 1786 3.006940 GCCCTACATGATCAAACAACGA 58.993 45.455 0.00 0.00 0.00 3.85
1727 1787 3.438781 GCCCTACATGATCAAACAACGAA 59.561 43.478 0.00 0.00 0.00 3.85
1728 1788 4.671766 GCCCTACATGATCAAACAACGAAC 60.672 45.833 0.00 0.00 0.00 3.95
1729 1789 4.454161 CCCTACATGATCAAACAACGAACA 59.546 41.667 0.00 0.00 0.00 3.18
1730 1790 5.049060 CCCTACATGATCAAACAACGAACAA 60.049 40.000 0.00 0.00 0.00 2.83
1731 1791 5.851177 CCTACATGATCAAACAACGAACAAC 59.149 40.000 0.00 0.00 0.00 3.32
1732 1792 5.242069 ACATGATCAAACAACGAACAACA 57.758 34.783 0.00 0.00 0.00 3.33
1733 1793 5.645624 ACATGATCAAACAACGAACAACAA 58.354 33.333 0.00 0.00 0.00 2.83
1734 1794 6.096036 ACATGATCAAACAACGAACAACAAA 58.904 32.000 0.00 0.00 0.00 2.83
1735 1795 6.587990 ACATGATCAAACAACGAACAACAAAA 59.412 30.769 0.00 0.00 0.00 2.44
1736 1796 7.277539 ACATGATCAAACAACGAACAACAAAAT 59.722 29.630 0.00 0.00 0.00 1.82
1737 1797 7.215696 TGATCAAACAACGAACAACAAAATC 57.784 32.000 0.00 0.00 0.00 2.17
1738 1798 5.672653 TCAAACAACGAACAACAAAATCG 57.327 34.783 0.00 0.00 42.05 3.34
1739 1799 4.559251 TCAAACAACGAACAACAAAATCGG 59.441 37.500 0.00 0.00 40.71 4.18
1740 1800 4.358494 AACAACGAACAACAAAATCGGA 57.642 36.364 0.00 0.00 40.71 4.55
1741 1801 4.358494 ACAACGAACAACAAAATCGGAA 57.642 36.364 0.00 0.00 40.71 4.30
1742 1802 4.927422 ACAACGAACAACAAAATCGGAAT 58.073 34.783 0.00 0.00 40.71 3.01
1743 1803 4.973663 ACAACGAACAACAAAATCGGAATC 59.026 37.500 0.00 0.00 40.71 2.52
1744 1804 4.822036 ACGAACAACAAAATCGGAATCA 57.178 36.364 0.00 0.00 40.71 2.57
1745 1805 5.176407 ACGAACAACAAAATCGGAATCAA 57.824 34.783 0.00 0.00 40.71 2.57
1746 1806 5.583495 ACGAACAACAAAATCGGAATCAAA 58.417 33.333 0.00 0.00 40.71 2.69
1747 1807 6.212955 ACGAACAACAAAATCGGAATCAAAT 58.787 32.000 0.00 0.00 40.71 2.32
1748 1808 6.143758 ACGAACAACAAAATCGGAATCAAATG 59.856 34.615 0.00 0.00 40.71 2.32
1749 1809 6.362016 CGAACAACAAAATCGGAATCAAATGA 59.638 34.615 0.00 0.00 33.15 2.57
1750 1810 7.096271 CGAACAACAAAATCGGAATCAAATGAA 60.096 33.333 0.00 0.00 33.15 2.57
1751 1811 7.406799 ACAACAAAATCGGAATCAAATGAAC 57.593 32.000 0.00 0.00 0.00 3.18
1752 1812 6.983307 ACAACAAAATCGGAATCAAATGAACA 59.017 30.769 0.00 0.00 0.00 3.18
1753 1813 7.493971 ACAACAAAATCGGAATCAAATGAACAA 59.506 29.630 0.00 0.00 0.00 2.83
1754 1814 7.406799 ACAAAATCGGAATCAAATGAACAAC 57.593 32.000 0.00 0.00 0.00 3.32
1755 1815 6.983307 ACAAAATCGGAATCAAATGAACAACA 59.017 30.769 0.00 0.00 0.00 3.33
1756 1816 7.493971 ACAAAATCGGAATCAAATGAACAACAA 59.506 29.630 0.00 0.00 0.00 2.83
1757 1817 8.333908 CAAAATCGGAATCAAATGAACAACAAA 58.666 29.630 0.00 0.00 0.00 2.83
1758 1818 8.430801 AAATCGGAATCAAATGAACAACAAAA 57.569 26.923 0.00 0.00 0.00 2.44
1759 1819 8.606040 AATCGGAATCAAATGAACAACAAAAT 57.394 26.923 0.00 0.00 0.00 1.82
1760 1820 8.606040 ATCGGAATCAAATGAACAACAAAATT 57.394 26.923 0.00 0.00 0.00 1.82
1761 1821 8.071122 TCGGAATCAAATGAACAACAAAATTC 57.929 30.769 0.00 0.00 0.00 2.17
1762 1822 7.708322 TCGGAATCAAATGAACAACAAAATTCA 59.292 29.630 0.00 0.00 39.09 2.57
1763 1823 7.793427 CGGAATCAAATGAACAACAAAATTCAC 59.207 33.333 0.00 0.00 37.64 3.18
1764 1824 8.610896 GGAATCAAATGAACAACAAAATTCACA 58.389 29.630 0.00 0.00 37.64 3.58
1771 1831 7.778470 TGAACAACAAAATTCACATAAACCC 57.222 32.000 0.00 0.00 29.89 4.11
1772 1832 7.331026 TGAACAACAAAATTCACATAAACCCA 58.669 30.769 0.00 0.00 29.89 4.51
1773 1833 7.278868 TGAACAACAAAATTCACATAAACCCAC 59.721 33.333 0.00 0.00 29.89 4.61
1774 1834 6.883744 ACAACAAAATTCACATAAACCCACT 58.116 32.000 0.00 0.00 0.00 4.00
1775 1835 7.334858 ACAACAAAATTCACATAAACCCACTT 58.665 30.769 0.00 0.00 0.00 3.16
1776 1836 7.826744 ACAACAAAATTCACATAAACCCACTTT 59.173 29.630 0.00 0.00 0.00 2.66
1777 1837 9.319143 CAACAAAATTCACATAAACCCACTTTA 57.681 29.630 0.00 0.00 0.00 1.85
1778 1838 8.880878 ACAAAATTCACATAAACCCACTTTAC 57.119 30.769 0.00 0.00 0.00 2.01
1779 1839 8.478877 ACAAAATTCACATAAACCCACTTTACA 58.521 29.630 0.00 0.00 0.00 2.41
1780 1840 9.487790 CAAAATTCACATAAACCCACTTTACAT 57.512 29.630 0.00 0.00 0.00 2.29
1786 1846 9.521841 TCACATAAACCCACTTTACATTATTCA 57.478 29.630 0.00 0.00 0.00 2.57
1817 1877 6.668323 TGCAGACAAGTTCTAAATTAACAGC 58.332 36.000 0.00 0.00 31.12 4.40
1818 1878 6.086871 GCAGACAAGTTCTAAATTAACAGCC 58.913 40.000 0.00 0.00 31.12 4.85
1819 1879 6.072452 GCAGACAAGTTCTAAATTAACAGCCT 60.072 38.462 0.00 0.00 31.12 4.58
1820 1880 7.301054 CAGACAAGTTCTAAATTAACAGCCTG 58.699 38.462 0.00 0.00 31.12 4.85
1821 1881 6.013842 ACAAGTTCTAAATTAACAGCCTGC 57.986 37.500 0.00 0.00 0.00 4.85
1822 1882 4.946784 AGTTCTAAATTAACAGCCTGCG 57.053 40.909 0.00 0.00 0.00 5.18
1823 1883 3.127030 AGTTCTAAATTAACAGCCTGCGC 59.873 43.478 0.00 0.00 0.00 6.09
1824 1884 1.663643 TCTAAATTAACAGCCTGCGCG 59.336 47.619 0.00 0.00 41.18 6.86
1825 1885 0.730265 TAAATTAACAGCCTGCGCGG 59.270 50.000 9.96 9.96 41.18 6.46
1826 1886 0.958382 AAATTAACAGCCTGCGCGGA 60.958 50.000 20.25 3.19 41.18 5.54
1827 1887 1.369091 AATTAACAGCCTGCGCGGAG 61.369 55.000 21.89 21.89 41.18 4.63
1828 1888 3.950794 TTAACAGCCTGCGCGGAGG 62.951 63.158 38.90 38.90 41.18 4.30
1837 1897 4.221422 GCGCGGAGGATGGCACTA 62.221 66.667 8.83 0.00 0.00 2.74
1838 1898 2.737180 CGCGGAGGATGGCACTAT 59.263 61.111 0.00 0.00 0.00 2.12
1839 1899 1.069765 CGCGGAGGATGGCACTATT 59.930 57.895 0.00 0.00 0.00 1.73
1840 1900 1.224069 CGCGGAGGATGGCACTATTG 61.224 60.000 0.00 0.00 0.00 1.90
1841 1901 0.886490 GCGGAGGATGGCACTATTGG 60.886 60.000 0.00 0.00 0.00 3.16
1852 1912 3.477899 GCACTATTGGCAAAGACTGTC 57.522 47.619 3.01 0.00 0.00 3.51
1853 1913 3.077359 GCACTATTGGCAAAGACTGTCT 58.923 45.455 3.01 4.06 0.00 3.41
1854 1914 3.120060 GCACTATTGGCAAAGACTGTCTG 60.120 47.826 11.71 1.69 0.00 3.51
1855 1915 3.438087 CACTATTGGCAAAGACTGTCTGG 59.562 47.826 11.71 8.14 0.00 3.86
1856 1916 1.251251 ATTGGCAAAGACTGTCTGGC 58.749 50.000 20.36 20.36 36.25 4.85
1857 1917 1.165907 TTGGCAAAGACTGTCTGGCG 61.166 55.000 21.18 11.15 38.41 5.69
1858 1918 2.328099 GGCAAAGACTGTCTGGCGG 61.328 63.158 21.18 9.95 30.95 6.13
1859 1919 1.301716 GCAAAGACTGTCTGGCGGA 60.302 57.895 11.71 0.00 0.00 5.54
1860 1920 0.884704 GCAAAGACTGTCTGGCGGAA 60.885 55.000 11.71 0.00 0.00 4.30
1861 1921 1.593196 CAAAGACTGTCTGGCGGAAA 58.407 50.000 11.71 0.00 0.00 3.13
1862 1922 1.264288 CAAAGACTGTCTGGCGGAAAC 59.736 52.381 11.71 0.00 0.00 2.78
1890 1950 2.432628 CGAAGCGTGGTGGGTCTC 60.433 66.667 0.00 0.00 0.00 3.36
1891 1951 2.432628 GAAGCGTGGTGGGTCTCG 60.433 66.667 0.00 0.00 0.00 4.04
1895 1955 4.742201 CGTGGTGGGTCTCGCTGG 62.742 72.222 0.00 0.00 0.00 4.85
1896 1956 4.394712 GTGGTGGGTCTCGCTGGG 62.395 72.222 0.00 0.00 0.00 4.45
1909 1969 3.897856 CTGGGGGAGCATAGGGAG 58.102 66.667 0.00 0.00 0.00 4.30
1910 1970 1.845205 CTGGGGGAGCATAGGGAGG 60.845 68.421 0.00 0.00 0.00 4.30
1911 1971 2.332258 CTGGGGGAGCATAGGGAGGA 62.332 65.000 0.00 0.00 0.00 3.71
1912 1972 1.073706 GGGGGAGCATAGGGAGGAA 60.074 63.158 0.00 0.00 0.00 3.36
1913 1973 0.697854 GGGGGAGCATAGGGAGGAAA 60.698 60.000 0.00 0.00 0.00 3.13
1914 1974 0.767998 GGGGAGCATAGGGAGGAAAG 59.232 60.000 0.00 0.00 0.00 2.62
1915 1975 0.767998 GGGAGCATAGGGAGGAAAGG 59.232 60.000 0.00 0.00 0.00 3.11
1916 1976 0.767998 GGAGCATAGGGAGGAAAGGG 59.232 60.000 0.00 0.00 0.00 3.95
1917 1977 0.767998 GAGCATAGGGAGGAAAGGGG 59.232 60.000 0.00 0.00 0.00 4.79
1918 1978 0.699231 AGCATAGGGAGGAAAGGGGG 60.699 60.000 0.00 0.00 0.00 5.40
1919 1979 1.846973 CATAGGGAGGAAAGGGGGC 59.153 63.158 0.00 0.00 0.00 5.80
1920 1980 1.387492 ATAGGGAGGAAAGGGGGCC 60.387 63.158 0.00 0.00 0.00 5.80
1921 1981 2.953446 ATAGGGAGGAAAGGGGGCCC 62.953 65.000 15.76 15.76 39.12 5.80
1924 1984 3.335729 GAGGAAAGGGGGCCCGAA 61.336 66.667 17.79 0.00 41.95 4.30
1925 1985 3.640257 GAGGAAAGGGGGCCCGAAC 62.640 68.421 17.79 8.87 41.95 3.95
1934 1994 4.011517 GGCCCGAACGGTGGAAGA 62.012 66.667 12.23 0.00 0.00 2.87
1935 1995 2.434359 GCCCGAACGGTGGAAGAG 60.434 66.667 12.23 0.00 0.00 2.85
1936 1996 2.434359 CCCGAACGGTGGAAGAGC 60.434 66.667 12.23 0.00 0.00 4.09
1937 1997 2.434359 CCGAACGGTGGAAGAGCC 60.434 66.667 4.99 0.00 37.10 4.70
1938 1998 2.342279 CGAACGGTGGAAGAGCCA 59.658 61.111 0.00 0.00 46.96 4.75
1945 2005 3.826282 TGGAAGAGCCAGGGGAAG 58.174 61.111 0.00 0.00 43.33 3.46
1946 2006 2.273776 GGAAGAGCCAGGGGAAGC 59.726 66.667 0.00 0.00 36.34 3.86
1947 2007 2.273776 GAAGAGCCAGGGGAAGCC 59.726 66.667 0.00 0.00 0.00 4.35
1948 2008 3.689002 GAAGAGCCAGGGGAAGCCG 62.689 68.421 0.00 0.00 0.00 5.52
1954 2014 3.411517 CAGGGGAAGCCGGGTCAT 61.412 66.667 6.62 0.00 0.00 3.06
1955 2015 2.614013 AGGGGAAGCCGGGTCATT 60.614 61.111 6.62 0.00 0.00 2.57
1956 2016 2.238701 AGGGGAAGCCGGGTCATTT 61.239 57.895 6.62 0.00 0.00 2.32
1957 2017 2.052104 GGGGAAGCCGGGTCATTTG 61.052 63.158 6.62 0.00 0.00 2.32
1958 2018 1.001393 GGGAAGCCGGGTCATTTGA 60.001 57.895 6.62 0.00 0.00 2.69
1959 2019 0.610785 GGGAAGCCGGGTCATTTGAA 60.611 55.000 6.62 0.00 0.00 2.69
1960 2020 0.811281 GGAAGCCGGGTCATTTGAAG 59.189 55.000 6.62 0.00 0.00 3.02
1961 2021 0.811281 GAAGCCGGGTCATTTGAAGG 59.189 55.000 6.62 0.00 0.00 3.46
1962 2022 0.404040 AAGCCGGGTCATTTGAAGGA 59.596 50.000 6.62 0.00 0.00 3.36
1963 2023 0.404040 AGCCGGGTCATTTGAAGGAA 59.596 50.000 0.00 0.00 0.00 3.36
1964 2024 1.203001 AGCCGGGTCATTTGAAGGAAA 60.203 47.619 0.00 0.00 0.00 3.13
1965 2025 1.824852 GCCGGGTCATTTGAAGGAAAT 59.175 47.619 2.18 0.00 34.34 2.17
1974 2034 5.077134 CATTTGAAGGAAATGGAAGGACC 57.923 43.478 0.00 0.00 45.06 4.46
1975 2035 2.489938 TGAAGGAAATGGAAGGACCG 57.510 50.000 0.00 0.00 42.61 4.79
1976 2036 1.982226 TGAAGGAAATGGAAGGACCGA 59.018 47.619 0.00 0.00 42.61 4.69
1977 2037 2.027192 TGAAGGAAATGGAAGGACCGAG 60.027 50.000 0.00 0.00 42.61 4.63
1978 2038 0.253327 AGGAAATGGAAGGACCGAGC 59.747 55.000 0.00 0.00 42.61 5.03
1979 2039 1.090052 GGAAATGGAAGGACCGAGCG 61.090 60.000 0.00 0.00 42.61 5.03
1980 2040 1.078426 AAATGGAAGGACCGAGCGG 60.078 57.895 7.48 7.48 42.61 5.52
1981 2041 3.682292 AATGGAAGGACCGAGCGGC 62.682 63.158 9.14 1.88 42.61 6.53
1983 2043 4.516195 GGAAGGACCGAGCGGCTC 62.516 72.222 19.92 19.92 39.32 4.70
1984 2044 3.760035 GAAGGACCGAGCGGCTCA 61.760 66.667 27.83 0.00 39.32 4.26
1985 2045 3.077556 AAGGACCGAGCGGCTCAT 61.078 61.111 27.83 16.27 39.32 2.90
1986 2046 2.579684 GAAGGACCGAGCGGCTCATT 62.580 60.000 27.83 14.76 39.32 2.57
1987 2047 2.579684 AAGGACCGAGCGGCTCATTC 62.580 60.000 27.83 21.39 39.32 2.67
1988 2048 2.956964 GACCGAGCGGCTCATTCG 60.957 66.667 27.83 15.55 39.32 3.34
1989 2049 3.701604 GACCGAGCGGCTCATTCGT 62.702 63.158 27.83 17.47 39.32 3.85
1990 2050 2.509336 CCGAGCGGCTCATTCGTT 60.509 61.111 27.83 0.00 32.73 3.85
1991 2051 2.517450 CCGAGCGGCTCATTCGTTC 61.517 63.158 27.83 1.20 35.15 3.95
1992 2052 1.517257 CGAGCGGCTCATTCGTTCT 60.517 57.895 27.83 0.00 36.08 3.01
1993 2053 1.078759 CGAGCGGCTCATTCGTTCTT 61.079 55.000 27.83 0.00 36.08 2.52
1994 2054 1.797713 CGAGCGGCTCATTCGTTCTTA 60.798 52.381 27.83 0.00 36.08 2.10
1995 2055 2.474816 GAGCGGCTCATTCGTTCTTAT 58.525 47.619 24.42 0.00 35.51 1.73
1996 2056 2.473235 GAGCGGCTCATTCGTTCTTATC 59.527 50.000 24.42 0.00 35.51 1.75
1997 2057 1.527311 GCGGCTCATTCGTTCTTATCC 59.473 52.381 0.00 0.00 0.00 2.59
1998 2058 2.135933 CGGCTCATTCGTTCTTATCCC 58.864 52.381 0.00 0.00 0.00 3.85
1999 2059 2.483013 CGGCTCATTCGTTCTTATCCCA 60.483 50.000 0.00 0.00 0.00 4.37
2000 2060 2.872858 GGCTCATTCGTTCTTATCCCAC 59.127 50.000 0.00 0.00 0.00 4.61
2001 2061 3.432326 GGCTCATTCGTTCTTATCCCACT 60.432 47.826 0.00 0.00 0.00 4.00
2002 2062 4.202223 GGCTCATTCGTTCTTATCCCACTA 60.202 45.833 0.00 0.00 0.00 2.74
2003 2063 4.745620 GCTCATTCGTTCTTATCCCACTAC 59.254 45.833 0.00 0.00 0.00 2.73
2004 2064 5.452077 GCTCATTCGTTCTTATCCCACTACT 60.452 44.000 0.00 0.00 0.00 2.57
2005 2065 6.238953 GCTCATTCGTTCTTATCCCACTACTA 60.239 42.308 0.00 0.00 0.00 1.82
2006 2066 7.273320 TCATTCGTTCTTATCCCACTACTAG 57.727 40.000 0.00 0.00 0.00 2.57
2007 2067 6.264744 TCATTCGTTCTTATCCCACTACTAGG 59.735 42.308 0.00 0.00 0.00 3.02
2030 2090 7.520451 GGGAAAACCTTATACACAGAAACTT 57.480 36.000 0.00 0.00 35.85 2.66
2031 2091 8.625786 GGGAAAACCTTATACACAGAAACTTA 57.374 34.615 0.00 0.00 35.85 2.24
2032 2092 8.727910 GGGAAAACCTTATACACAGAAACTTAG 58.272 37.037 0.00 0.00 35.85 2.18
2033 2093 8.235226 GGAAAACCTTATACACAGAAACTTAGC 58.765 37.037 0.00 0.00 0.00 3.09
2034 2094 8.685838 AAAACCTTATACACAGAAACTTAGCA 57.314 30.769 0.00 0.00 0.00 3.49
2035 2095 7.907214 AACCTTATACACAGAAACTTAGCAG 57.093 36.000 0.00 0.00 0.00 4.24
2036 2096 7.005709 ACCTTATACACAGAAACTTAGCAGT 57.994 36.000 0.00 0.00 33.11 4.40
2037 2097 8.130671 ACCTTATACACAGAAACTTAGCAGTA 57.869 34.615 0.00 0.00 30.68 2.74
2038 2098 8.251721 ACCTTATACACAGAAACTTAGCAGTAG 58.748 37.037 0.00 0.00 30.68 2.57
2039 2099 8.251721 CCTTATACACAGAAACTTAGCAGTAGT 58.748 37.037 0.00 0.00 30.68 2.73
2040 2100 8.981724 TTATACACAGAAACTTAGCAGTAGTG 57.018 34.615 0.00 0.00 30.68 2.74
2053 2113 3.837213 CAGTAGTGCTGGTCAAAATGG 57.163 47.619 0.00 0.00 41.42 3.16
2054 2114 2.489329 CAGTAGTGCTGGTCAAAATGGG 59.511 50.000 0.00 0.00 41.42 4.00
2055 2115 1.818674 GTAGTGCTGGTCAAAATGGGG 59.181 52.381 0.00 0.00 0.00 4.96
2056 2116 1.187567 AGTGCTGGTCAAAATGGGGC 61.188 55.000 0.00 0.00 0.00 5.80
2057 2117 2.274645 TGCTGGTCAAAATGGGGCG 61.275 57.895 0.00 0.00 0.00 6.13
2058 2118 2.573340 CTGGTCAAAATGGGGCGC 59.427 61.111 0.00 0.00 0.00 6.53
2059 2119 1.978617 CTGGTCAAAATGGGGCGCT 60.979 57.895 7.64 0.00 0.00 5.92
2060 2120 0.679640 CTGGTCAAAATGGGGCGCTA 60.680 55.000 7.64 0.00 0.00 4.26
2061 2121 0.963355 TGGTCAAAATGGGGCGCTAC 60.963 55.000 7.64 0.22 0.00 3.58
2062 2122 0.679960 GGTCAAAATGGGGCGCTACT 60.680 55.000 7.64 0.00 0.00 2.57
2063 2123 0.451783 GTCAAAATGGGGCGCTACTG 59.548 55.000 7.64 0.00 0.00 2.74
2064 2124 1.139520 CAAAATGGGGCGCTACTGC 59.860 57.895 7.64 0.00 0.00 4.40
2065 2125 1.000896 AAAATGGGGCGCTACTGCT 60.001 52.632 7.64 0.00 36.97 4.24
2066 2126 0.254747 AAAATGGGGCGCTACTGCTA 59.745 50.000 7.64 0.00 36.97 3.49
2067 2127 0.254747 AAATGGGGCGCTACTGCTAA 59.745 50.000 7.64 0.00 36.97 3.09
2068 2128 0.474184 AATGGGGCGCTACTGCTAAT 59.526 50.000 7.64 0.00 36.97 1.73
2069 2129 0.474184 ATGGGGCGCTACTGCTAATT 59.526 50.000 7.64 0.00 36.97 1.40
2070 2130 1.124780 TGGGGCGCTACTGCTAATTA 58.875 50.000 7.64 0.00 36.97 1.40
2071 2131 1.070134 TGGGGCGCTACTGCTAATTAG 59.930 52.381 7.64 8.20 36.97 1.73
2072 2132 1.070289 GGGGCGCTACTGCTAATTAGT 59.930 52.381 13.91 0.00 36.97 2.24
2073 2133 2.298163 GGGGCGCTACTGCTAATTAGTA 59.702 50.000 13.91 8.65 36.97 1.82
2074 2134 3.576648 GGGCGCTACTGCTAATTAGTAG 58.423 50.000 24.09 24.09 46.57 2.57
2076 2136 4.217118 GGGCGCTACTGCTAATTAGTAGTA 59.783 45.833 29.94 29.94 45.44 1.82
2084 2144 3.625938 GCTAATTAGTAGTAGCGCGTGT 58.374 45.455 13.91 0.00 38.08 4.49
2085 2145 3.663105 GCTAATTAGTAGTAGCGCGTGTC 59.337 47.826 13.91 0.00 38.08 3.67
2086 2146 3.770263 AATTAGTAGTAGCGCGTGTCA 57.230 42.857 8.43 0.00 0.00 3.58
2087 2147 2.532531 TTAGTAGTAGCGCGTGTCAC 57.467 50.000 8.43 0.31 0.00 3.67
2088 2148 1.730501 TAGTAGTAGCGCGTGTCACT 58.269 50.000 8.43 8.54 0.00 3.41
2089 2149 1.730501 AGTAGTAGCGCGTGTCACTA 58.269 50.000 8.43 7.52 0.00 2.74
2090 2150 2.079158 AGTAGTAGCGCGTGTCACTAA 58.921 47.619 8.43 0.00 0.00 2.24
2091 2151 2.485426 AGTAGTAGCGCGTGTCACTAAA 59.515 45.455 8.43 0.00 0.00 1.85
2092 2152 1.978542 AGTAGCGCGTGTCACTAAAG 58.021 50.000 8.43 0.00 0.00 1.85
2093 2153 0.365859 GTAGCGCGTGTCACTAAAGC 59.634 55.000 8.43 1.52 0.00 3.51
2094 2154 0.038983 TAGCGCGTGTCACTAAAGCA 60.039 50.000 8.43 0.00 0.00 3.91
2095 2155 1.154654 GCGCGTGTCACTAAAGCAC 60.155 57.895 8.43 0.00 0.00 4.40
2098 2158 2.517598 CGTGTCACTAAAGCACGCT 58.482 52.632 0.65 0.00 46.86 5.07
2099 2159 1.693467 CGTGTCACTAAAGCACGCTA 58.307 50.000 0.65 0.00 46.86 4.26
2100 2160 1.385743 CGTGTCACTAAAGCACGCTAC 59.614 52.381 0.65 0.00 46.86 3.58
2101 2161 2.400399 GTGTCACTAAAGCACGCTACA 58.600 47.619 0.00 0.00 0.00 2.74
2102 2162 2.408704 GTGTCACTAAAGCACGCTACAG 59.591 50.000 0.00 0.00 0.00 2.74
2103 2163 2.295070 TGTCACTAAAGCACGCTACAGA 59.705 45.455 6.77 0.00 0.00 3.41
2104 2164 3.056821 TGTCACTAAAGCACGCTACAGAT 60.057 43.478 6.77 0.00 0.00 2.90
2105 2165 4.157105 TGTCACTAAAGCACGCTACAGATA 59.843 41.667 6.77 0.00 0.00 1.98
2106 2166 5.163550 TGTCACTAAAGCACGCTACAGATAT 60.164 40.000 6.77 0.00 0.00 1.63
2107 2167 5.174035 GTCACTAAAGCACGCTACAGATATG 59.826 44.000 6.77 0.00 0.00 1.78
2108 2168 4.445718 CACTAAAGCACGCTACAGATATGG 59.554 45.833 6.77 0.00 0.00 2.74
2109 2169 3.543680 AAAGCACGCTACAGATATGGT 57.456 42.857 0.00 0.00 0.00 3.55
2110 2170 3.543680 AAGCACGCTACAGATATGGTT 57.456 42.857 0.00 0.00 0.00 3.67
2111 2171 4.665833 AAGCACGCTACAGATATGGTTA 57.334 40.909 0.00 0.00 0.00 2.85
2112 2172 4.873746 AGCACGCTACAGATATGGTTAT 57.126 40.909 0.00 0.00 0.00 1.89
2113 2173 5.977489 AGCACGCTACAGATATGGTTATA 57.023 39.130 0.00 0.00 0.00 0.98
2114 2174 5.955488 AGCACGCTACAGATATGGTTATAG 58.045 41.667 0.00 0.00 0.00 1.31
2115 2175 4.563184 GCACGCTACAGATATGGTTATAGC 59.437 45.833 0.00 0.00 0.00 2.97
2116 2176 5.709966 CACGCTACAGATATGGTTATAGCA 58.290 41.667 8.02 0.00 0.00 3.49
2117 2177 5.802451 CACGCTACAGATATGGTTATAGCAG 59.198 44.000 8.02 4.31 0.00 4.24
2118 2178 5.477291 ACGCTACAGATATGGTTATAGCAGT 59.523 40.000 8.02 4.78 31.24 4.40
2119 2179 6.657966 ACGCTACAGATATGGTTATAGCAGTA 59.342 38.462 8.02 0.00 29.46 2.74
2120 2180 7.148222 ACGCTACAGATATGGTTATAGCAGTAG 60.148 40.741 8.02 9.39 42.92 2.57
2132 2192 3.786101 CAGTAGCGCGTCTGCAAT 58.214 55.556 18.36 0.00 42.97 3.56
2133 2193 2.957871 CAGTAGCGCGTCTGCAATA 58.042 52.632 18.36 0.00 42.97 1.90
2134 2194 1.277326 CAGTAGCGCGTCTGCAATAA 58.723 50.000 18.36 0.00 42.97 1.40
2135 2195 1.658596 CAGTAGCGCGTCTGCAATAAA 59.341 47.619 18.36 0.00 42.97 1.40
2136 2196 2.093625 CAGTAGCGCGTCTGCAATAAAA 59.906 45.455 18.36 0.00 42.97 1.52
2137 2197 2.739913 AGTAGCGCGTCTGCAATAAAAA 59.260 40.909 8.43 0.00 42.97 1.94
2138 2198 2.247311 AGCGCGTCTGCAATAAAAAG 57.753 45.000 8.43 0.00 42.97 2.27
2139 2199 0.635231 GCGCGTCTGCAATAAAAAGC 59.365 50.000 8.43 0.00 42.97 3.51
2140 2200 0.900547 CGCGTCTGCAATAAAAAGCG 59.099 50.000 0.00 0.00 42.97 4.68
2141 2201 1.259316 GCGTCTGCAATAAAAAGCGG 58.741 50.000 0.00 0.00 42.15 5.52
2142 2202 1.401018 GCGTCTGCAATAAAAAGCGGT 60.401 47.619 0.00 0.00 42.15 5.68
2143 2203 2.159626 GCGTCTGCAATAAAAAGCGGTA 60.160 45.455 0.00 0.00 42.15 4.02
2144 2204 3.413558 CGTCTGCAATAAAAAGCGGTAC 58.586 45.455 0.00 0.00 38.28 3.34
2145 2205 3.124636 CGTCTGCAATAAAAAGCGGTACT 59.875 43.478 0.00 0.00 38.28 2.73
2146 2206 4.327898 CGTCTGCAATAAAAAGCGGTACTA 59.672 41.667 0.00 0.00 38.28 1.82
2147 2207 5.557388 GTCTGCAATAAAAAGCGGTACTAC 58.443 41.667 0.00 0.00 38.28 2.73
2148 2208 5.350640 GTCTGCAATAAAAAGCGGTACTACT 59.649 40.000 0.00 0.00 38.28 2.57
2149 2209 6.532657 GTCTGCAATAAAAAGCGGTACTACTA 59.467 38.462 0.00 0.00 38.28 1.82
2150 2210 7.224167 GTCTGCAATAAAAAGCGGTACTACTAT 59.776 37.037 0.00 0.00 38.28 2.12
2151 2211 8.415553 TCTGCAATAAAAAGCGGTACTACTATA 58.584 33.333 0.00 0.00 38.28 1.31
2152 2212 8.945481 TGCAATAAAAAGCGGTACTACTATAA 57.055 30.769 0.00 0.00 0.00 0.98
2153 2213 9.550406 TGCAATAAAAAGCGGTACTACTATAAT 57.450 29.630 0.00 0.00 0.00 1.28
2157 2217 9.716531 ATAAAAAGCGGTACTACTATAATTCCC 57.283 33.333 0.00 0.00 0.00 3.97
2158 2218 6.736110 AAAGCGGTACTACTATAATTCCCA 57.264 37.500 0.00 0.00 0.00 4.37
2159 2219 5.718724 AGCGGTACTACTATAATTCCCAC 57.281 43.478 0.00 0.00 0.00 4.61
2160 2220 5.142639 AGCGGTACTACTATAATTCCCACA 58.857 41.667 0.00 0.00 0.00 4.17
2161 2221 5.010415 AGCGGTACTACTATAATTCCCACAC 59.990 44.000 0.00 0.00 0.00 3.82
2162 2222 5.010415 GCGGTACTACTATAATTCCCACACT 59.990 44.000 0.00 0.00 0.00 3.55
2163 2223 6.462067 GCGGTACTACTATAATTCCCACACTT 60.462 42.308 0.00 0.00 0.00 3.16
2164 2224 7.495055 CGGTACTACTATAATTCCCACACTTT 58.505 38.462 0.00 0.00 0.00 2.66
2165 2225 7.983484 CGGTACTACTATAATTCCCACACTTTT 59.017 37.037 0.00 0.00 0.00 2.27
2166 2226 9.106070 GGTACTACTATAATTCCCACACTTTTG 57.894 37.037 0.00 0.00 0.00 2.44
2167 2227 9.662947 GTACTACTATAATTCCCACACTTTTGT 57.337 33.333 0.00 0.00 35.84 2.83
2168 2228 8.788325 ACTACTATAATTCCCACACTTTTGTC 57.212 34.615 0.00 0.00 31.66 3.18
2169 2229 6.737254 ACTATAATTCCCACACTTTTGTCG 57.263 37.500 0.00 0.00 31.66 4.35
2170 2230 5.646360 ACTATAATTCCCACACTTTTGTCGG 59.354 40.000 0.00 0.00 35.38 4.79
2171 2231 2.358322 ATTCCCACACTTTTGTCGGT 57.642 45.000 0.00 0.00 35.56 4.69
2172 2232 3.495434 ATTCCCACACTTTTGTCGGTA 57.505 42.857 0.00 0.00 35.56 4.02
2173 2233 2.536761 TCCCACACTTTTGTCGGTAG 57.463 50.000 0.00 0.00 35.56 3.18
2174 2234 1.071071 TCCCACACTTTTGTCGGTAGG 59.929 52.381 0.00 0.00 35.56 3.18
2175 2235 0.872388 CCACACTTTTGTCGGTAGGC 59.128 55.000 0.00 0.00 31.66 3.93
2176 2236 1.542547 CCACACTTTTGTCGGTAGGCT 60.543 52.381 0.00 0.00 31.66 4.58
2177 2237 2.289195 CCACACTTTTGTCGGTAGGCTA 60.289 50.000 0.00 0.00 31.66 3.93
2178 2238 2.993899 CACACTTTTGTCGGTAGGCTAG 59.006 50.000 0.00 0.00 31.66 3.42
2179 2239 2.028385 ACACTTTTGTCGGTAGGCTAGG 60.028 50.000 0.00 0.00 0.00 3.02
2180 2240 2.232941 CACTTTTGTCGGTAGGCTAGGA 59.767 50.000 0.00 0.00 0.00 2.94
2181 2241 2.901839 ACTTTTGTCGGTAGGCTAGGAA 59.098 45.455 0.00 0.00 0.00 3.36
2182 2242 3.518303 ACTTTTGTCGGTAGGCTAGGAAT 59.482 43.478 0.00 0.00 0.00 3.01
2183 2243 4.713321 ACTTTTGTCGGTAGGCTAGGAATA 59.287 41.667 0.00 0.00 0.00 1.75
2184 2244 4.931661 TTTGTCGGTAGGCTAGGAATAG 57.068 45.455 0.00 0.00 0.00 1.73
2185 2245 3.589951 TGTCGGTAGGCTAGGAATAGT 57.410 47.619 0.00 0.00 0.00 2.12
2186 2246 4.712051 TGTCGGTAGGCTAGGAATAGTA 57.288 45.455 0.00 0.00 0.00 1.82
2187 2247 4.649692 TGTCGGTAGGCTAGGAATAGTAG 58.350 47.826 0.00 0.00 0.00 2.57
2188 2248 4.103785 TGTCGGTAGGCTAGGAATAGTAGT 59.896 45.833 0.00 0.00 0.00 2.73
2189 2249 5.307976 TGTCGGTAGGCTAGGAATAGTAGTA 59.692 44.000 0.00 0.00 0.00 1.82
2190 2250 5.874261 GTCGGTAGGCTAGGAATAGTAGTAG 59.126 48.000 0.00 0.00 0.00 2.57
2191 2251 4.635324 CGGTAGGCTAGGAATAGTAGTAGC 59.365 50.000 0.00 0.00 37.72 3.58
2192 2252 4.635324 GGTAGGCTAGGAATAGTAGTAGCG 59.365 50.000 0.00 0.00 39.06 4.26
2193 2253 4.637387 AGGCTAGGAATAGTAGTAGCGA 57.363 45.455 0.00 0.00 39.06 4.93
2194 2254 5.182169 AGGCTAGGAATAGTAGTAGCGAT 57.818 43.478 0.00 0.00 39.06 4.58
2195 2255 4.944930 AGGCTAGGAATAGTAGTAGCGATG 59.055 45.833 0.00 0.00 39.06 3.84
2196 2256 4.439016 GGCTAGGAATAGTAGTAGCGATGC 60.439 50.000 0.00 0.00 39.06 3.91
2197 2257 4.156190 GCTAGGAATAGTAGTAGCGATGCA 59.844 45.833 0.00 0.00 0.00 3.96
2198 2258 5.335740 GCTAGGAATAGTAGTAGCGATGCAA 60.336 44.000 0.00 0.00 0.00 4.08
2199 2259 5.531122 AGGAATAGTAGTAGCGATGCAAA 57.469 39.130 0.00 0.00 0.00 3.68
2200 2260 5.533482 AGGAATAGTAGTAGCGATGCAAAG 58.467 41.667 0.00 0.00 0.00 2.77
2201 2261 5.302059 AGGAATAGTAGTAGCGATGCAAAGA 59.698 40.000 0.00 0.00 0.00 2.52
2202 2262 5.983720 GGAATAGTAGTAGCGATGCAAAGAA 59.016 40.000 0.00 0.00 0.00 2.52
2203 2263 6.479001 GGAATAGTAGTAGCGATGCAAAGAAA 59.521 38.462 0.00 0.00 0.00 2.52
2204 2264 7.011109 GGAATAGTAGTAGCGATGCAAAGAAAA 59.989 37.037 0.00 0.00 0.00 2.29
2205 2265 5.786401 AGTAGTAGCGATGCAAAGAAAAG 57.214 39.130 0.00 0.00 0.00 2.27
2206 2266 4.631813 AGTAGTAGCGATGCAAAGAAAAGG 59.368 41.667 0.00 0.00 0.00 3.11
2207 2267 3.674997 AGTAGCGATGCAAAGAAAAGGA 58.325 40.909 0.00 0.00 0.00 3.36
2208 2268 2.997485 AGCGATGCAAAGAAAAGGAC 57.003 45.000 0.00 0.00 0.00 3.85
2209 2269 1.197721 AGCGATGCAAAGAAAAGGACG 59.802 47.619 0.00 0.00 0.00 4.79
2210 2270 1.069227 GCGATGCAAAGAAAAGGACGT 60.069 47.619 0.00 0.00 0.00 4.34
2211 2271 2.604614 GCGATGCAAAGAAAAGGACGTT 60.605 45.455 0.00 0.00 0.00 3.99
2212 2272 3.364565 GCGATGCAAAGAAAAGGACGTTA 60.365 43.478 0.00 0.00 0.00 3.18
2213 2273 4.148891 CGATGCAAAGAAAAGGACGTTAC 58.851 43.478 0.00 0.00 0.00 2.50
2214 2274 3.974871 TGCAAAGAAAAGGACGTTACC 57.025 42.857 0.00 0.00 0.00 2.85
2215 2275 2.288458 TGCAAAGAAAAGGACGTTACCG 59.712 45.455 0.00 0.00 40.83 4.02
2216 2276 2.912366 CAAAGAAAAGGACGTTACCGC 58.088 47.619 0.00 0.00 37.70 5.68
2217 2277 2.538512 AAGAAAAGGACGTTACCGCT 57.461 45.000 0.00 0.00 37.70 5.52
2218 2278 3.665745 AAGAAAAGGACGTTACCGCTA 57.334 42.857 0.00 0.00 37.70 4.26
2219 2279 3.665745 AGAAAAGGACGTTACCGCTAA 57.334 42.857 0.00 0.00 37.70 3.09
2220 2280 3.582780 AGAAAAGGACGTTACCGCTAAG 58.417 45.455 0.00 0.00 37.70 2.18
2221 2281 3.006217 AGAAAAGGACGTTACCGCTAAGT 59.994 43.478 0.00 0.00 37.70 2.24
2222 2282 2.358939 AAGGACGTTACCGCTAAGTG 57.641 50.000 0.00 0.00 37.70 3.16
2223 2283 0.108945 AGGACGTTACCGCTAAGTGC 60.109 55.000 0.00 0.00 37.70 4.40
2224 2284 1.080435 GGACGTTACCGCTAAGTGCC 61.080 60.000 0.00 0.00 38.78 5.01
2225 2285 0.108945 GACGTTACCGCTAAGTGCCT 60.109 55.000 0.00 0.00 38.78 4.75
2226 2286 0.319405 ACGTTACCGCTAAGTGCCTT 59.681 50.000 0.00 0.00 38.78 4.35
2227 2287 0.719465 CGTTACCGCTAAGTGCCTTG 59.281 55.000 0.00 0.00 38.78 3.61
2228 2288 1.804601 GTTACCGCTAAGTGCCTTGT 58.195 50.000 0.00 0.00 38.78 3.16
2229 2289 2.671914 CGTTACCGCTAAGTGCCTTGTA 60.672 50.000 0.00 0.00 38.78 2.41
2230 2290 2.928116 GTTACCGCTAAGTGCCTTGTAG 59.072 50.000 0.00 0.00 38.78 2.74
2231 2291 0.974383 ACCGCTAAGTGCCTTGTAGT 59.026 50.000 0.00 0.00 38.78 2.73
2232 2292 2.173519 ACCGCTAAGTGCCTTGTAGTA 58.826 47.619 0.00 0.00 38.78 1.82
2233 2293 2.165845 ACCGCTAAGTGCCTTGTAGTAG 59.834 50.000 0.00 0.00 38.78 2.57
2234 2294 2.194271 CGCTAAGTGCCTTGTAGTAGC 58.806 52.381 0.00 0.00 38.78 3.58
2235 2295 2.194271 GCTAAGTGCCTTGTAGTAGCG 58.806 52.381 0.00 0.00 35.15 4.26
2236 2296 2.416972 GCTAAGTGCCTTGTAGTAGCGT 60.417 50.000 0.00 0.00 35.15 5.07
2237 2297 2.080286 AAGTGCCTTGTAGTAGCGTG 57.920 50.000 0.00 0.00 0.00 5.34
2238 2298 0.966920 AGTGCCTTGTAGTAGCGTGT 59.033 50.000 0.00 0.00 0.00 4.49
2239 2299 1.343465 AGTGCCTTGTAGTAGCGTGTT 59.657 47.619 0.00 0.00 0.00 3.32
2240 2300 2.140717 GTGCCTTGTAGTAGCGTGTTT 58.859 47.619 0.00 0.00 0.00 2.83
2241 2301 3.006110 AGTGCCTTGTAGTAGCGTGTTTA 59.994 43.478 0.00 0.00 0.00 2.01
2242 2302 3.122445 GTGCCTTGTAGTAGCGTGTTTAC 59.878 47.826 0.00 0.00 0.00 2.01
2243 2303 3.006110 TGCCTTGTAGTAGCGTGTTTACT 59.994 43.478 0.00 0.00 35.62 2.24
2244 2304 3.367025 GCCTTGTAGTAGCGTGTTTACTG 59.633 47.826 0.00 0.00 33.60 2.74
2245 2305 4.553323 CCTTGTAGTAGCGTGTTTACTGT 58.447 43.478 0.00 0.00 33.60 3.55
2246 2306 5.702865 CCTTGTAGTAGCGTGTTTACTGTA 58.297 41.667 0.00 0.00 33.60 2.74
2247 2307 6.327934 CCTTGTAGTAGCGTGTTTACTGTAT 58.672 40.000 0.00 0.00 33.60 2.29
2248 2308 7.475015 CCTTGTAGTAGCGTGTTTACTGTATA 58.525 38.462 0.00 0.00 33.60 1.47
2249 2309 7.642978 CCTTGTAGTAGCGTGTTTACTGTATAG 59.357 40.741 0.00 0.00 33.60 1.31
2250 2310 7.848223 TGTAGTAGCGTGTTTACTGTATAGA 57.152 36.000 0.00 0.00 33.60 1.98
2251 2311 7.913423 TGTAGTAGCGTGTTTACTGTATAGAG 58.087 38.462 0.00 0.00 33.60 2.43
2252 2312 5.819059 AGTAGCGTGTTTACTGTATAGAGC 58.181 41.667 0.00 0.00 30.46 4.09
2253 2313 3.692576 AGCGTGTTTACTGTATAGAGCG 58.307 45.455 0.00 0.00 0.00 5.03
2254 2314 2.215812 GCGTGTTTACTGTATAGAGCGC 59.784 50.000 0.00 0.00 34.65 5.92
2255 2315 3.692576 CGTGTTTACTGTATAGAGCGCT 58.307 45.455 11.27 11.27 0.00 5.92
2256 2316 4.787563 GCGTGTTTACTGTATAGAGCGCTA 60.788 45.833 11.50 0.00 38.39 4.26
2257 2317 4.669728 CGTGTTTACTGTATAGAGCGCTAC 59.330 45.833 11.50 5.27 0.00 3.58
2258 2318 5.503683 CGTGTTTACTGTATAGAGCGCTACT 60.504 44.000 11.50 12.36 0.00 2.57
2259 2319 5.681982 GTGTTTACTGTATAGAGCGCTACTG 59.318 44.000 11.50 11.76 0.00 2.74
2260 2320 4.485024 TTACTGTATAGAGCGCTACTGC 57.515 45.455 11.50 1.76 0.00 4.40
2270 2330 3.594603 AGCGCTACTGCTAAAAGAAGA 57.405 42.857 8.99 0.00 45.14 2.87
2271 2331 3.926616 AGCGCTACTGCTAAAAGAAGAA 58.073 40.909 8.99 0.00 45.14 2.52
2272 2332 4.315803 AGCGCTACTGCTAAAAGAAGAAA 58.684 39.130 8.99 0.00 45.14 2.52
2273 2333 4.755123 AGCGCTACTGCTAAAAGAAGAAAA 59.245 37.500 8.99 0.00 45.14 2.29
2274 2334 5.412904 AGCGCTACTGCTAAAAGAAGAAAAT 59.587 36.000 8.99 0.00 45.14 1.82
2275 2335 6.594159 AGCGCTACTGCTAAAAGAAGAAAATA 59.406 34.615 8.99 0.00 45.14 1.40
2276 2336 7.119262 AGCGCTACTGCTAAAAGAAGAAAATAA 59.881 33.333 8.99 0.00 45.14 1.40
2277 2337 7.749126 GCGCTACTGCTAAAAGAAGAAAATAAA 59.251 33.333 0.00 0.00 36.97 1.40
2278 2338 9.607285 CGCTACTGCTAAAAGAAGAAAATAAAA 57.393 29.630 0.00 0.00 36.97 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
164 177 3.770040 CTGGCGGTCATCGGTGGA 61.770 66.667 0.00 0.00 39.69 4.02
187 200 1.326328 GTACTGGGAGACGGGTATCC 58.674 60.000 3.90 3.90 40.13 2.59
400 413 1.002257 ATGCCGGACATGCAGAACA 60.002 52.632 5.05 0.00 42.92 3.18
637 655 2.858768 ACTCTTCTCCTCCTCTCCATCT 59.141 50.000 0.00 0.00 0.00 2.90
739 759 3.584406 TCCATCTCATTGCTATCCCGATT 59.416 43.478 0.00 0.00 0.00 3.34
744 764 4.063689 CTGTGTCCATCTCATTGCTATCC 58.936 47.826 0.00 0.00 0.00 2.59
745 765 4.953667 TCTGTGTCCATCTCATTGCTATC 58.046 43.478 0.00 0.00 0.00 2.08
746 766 4.202336 CCTCTGTGTCCATCTCATTGCTAT 60.202 45.833 0.00 0.00 0.00 2.97
747 767 3.133542 CCTCTGTGTCCATCTCATTGCTA 59.866 47.826 0.00 0.00 0.00 3.49
748 768 2.093075 CCTCTGTGTCCATCTCATTGCT 60.093 50.000 0.00 0.00 0.00 3.91
749 769 2.286872 CCTCTGTGTCCATCTCATTGC 58.713 52.381 0.00 0.00 0.00 3.56
750 770 3.268330 CACCTCTGTGTCCATCTCATTG 58.732 50.000 0.00 0.00 37.72 2.82
751 771 2.355513 GCACCTCTGTGTCCATCTCATT 60.356 50.000 0.00 0.00 44.65 2.57
752 772 1.209019 GCACCTCTGTGTCCATCTCAT 59.791 52.381 0.00 0.00 44.65 2.90
753 773 0.610174 GCACCTCTGTGTCCATCTCA 59.390 55.000 0.00 0.00 44.65 3.27
754 774 0.901124 AGCACCTCTGTGTCCATCTC 59.099 55.000 0.00 0.00 44.65 2.75
755 775 0.901124 GAGCACCTCTGTGTCCATCT 59.099 55.000 0.00 0.00 44.65 2.90
756 776 0.107945 GGAGCACCTCTGTGTCCATC 60.108 60.000 0.00 0.00 44.65 3.51
757 777 1.557269 GGGAGCACCTCTGTGTCCAT 61.557 60.000 0.00 0.00 44.65 3.41
758 778 2.217038 GGGAGCACCTCTGTGTCCA 61.217 63.158 0.00 0.00 44.65 4.02
847 882 1.292541 GCGTCTTCGGGTCTTCCTT 59.707 57.895 0.00 0.00 37.56 3.36
926 963 2.682594 CATCCTCCTGATGGTAGTGGA 58.317 52.381 0.00 0.00 45.99 4.02
953 990 2.575279 AGGATGACCTTGCAGAAGTGAT 59.425 45.455 0.00 0.00 45.36 3.06
1050 1088 1.966451 GCCGGTGTTGTTCCTGAGG 60.966 63.158 1.90 0.00 0.00 3.86
1089 1127 0.962356 CCCTGCCGTTCATCAGCTTT 60.962 55.000 0.00 0.00 0.00 3.51
1167 1205 3.006430 TGAGAAGCTTGAACGTCACCATA 59.994 43.478 2.10 0.00 0.00 2.74
1185 1223 1.304217 GAGGGTGTCGGGAGTGAGA 60.304 63.158 0.00 0.00 0.00 3.27
1339 1378 3.619233 ACAGTTCAACGCATAAACCAC 57.381 42.857 0.00 0.00 0.00 4.16
1418 1467 3.760151 ACAGCACACATCATAAGCACAAT 59.240 39.130 0.00 0.00 0.00 2.71
1560 1620 0.322456 GCATGGGCTGAACCACACTA 60.322 55.000 0.00 0.00 44.72 2.74
1711 1771 6.566310 TTTGTTGTTCGTTGTTTGATCATG 57.434 33.333 0.00 0.00 0.00 3.07
1716 1776 4.559251 CCGATTTTGTTGTTCGTTGTTTGA 59.441 37.500 0.00 0.00 0.00 2.69
1717 1777 4.559251 TCCGATTTTGTTGTTCGTTGTTTG 59.441 37.500 0.00 0.00 0.00 2.93
1718 1778 4.734917 TCCGATTTTGTTGTTCGTTGTTT 58.265 34.783 0.00 0.00 0.00 2.83
1719 1779 4.358494 TCCGATTTTGTTGTTCGTTGTT 57.642 36.364 0.00 0.00 0.00 2.83
1720 1780 4.358494 TTCCGATTTTGTTGTTCGTTGT 57.642 36.364 0.00 0.00 0.00 3.32
1721 1781 4.973051 TGATTCCGATTTTGTTGTTCGTTG 59.027 37.500 0.00 0.00 0.00 4.10
1722 1782 5.176407 TGATTCCGATTTTGTTGTTCGTT 57.824 34.783 0.00 0.00 0.00 3.85
1723 1783 4.822036 TGATTCCGATTTTGTTGTTCGT 57.178 36.364 0.00 0.00 0.00 3.85
1724 1784 6.362016 TCATTTGATTCCGATTTTGTTGTTCG 59.638 34.615 0.00 0.00 0.00 3.95
1725 1785 7.636259 TCATTTGATTCCGATTTTGTTGTTC 57.364 32.000 0.00 0.00 0.00 3.18
1726 1786 7.493971 TGTTCATTTGATTCCGATTTTGTTGTT 59.506 29.630 0.00 0.00 0.00 2.83
1727 1787 6.983307 TGTTCATTTGATTCCGATTTTGTTGT 59.017 30.769 0.00 0.00 0.00 3.32
1728 1788 7.405469 TGTTCATTTGATTCCGATTTTGTTG 57.595 32.000 0.00 0.00 0.00 3.33
1729 1789 7.493971 TGTTGTTCATTTGATTCCGATTTTGTT 59.506 29.630 0.00 0.00 0.00 2.83
1730 1790 6.983307 TGTTGTTCATTTGATTCCGATTTTGT 59.017 30.769 0.00 0.00 0.00 2.83
1731 1791 7.405469 TGTTGTTCATTTGATTCCGATTTTG 57.595 32.000 0.00 0.00 0.00 2.44
1732 1792 8.430801 TTTGTTGTTCATTTGATTCCGATTTT 57.569 26.923 0.00 0.00 0.00 1.82
1733 1793 8.430801 TTTTGTTGTTCATTTGATTCCGATTT 57.569 26.923 0.00 0.00 0.00 2.17
1734 1794 8.606040 ATTTTGTTGTTCATTTGATTCCGATT 57.394 26.923 0.00 0.00 0.00 3.34
1735 1795 8.606040 AATTTTGTTGTTCATTTGATTCCGAT 57.394 26.923 0.00 0.00 0.00 4.18
1736 1796 7.708322 TGAATTTTGTTGTTCATTTGATTCCGA 59.292 29.630 0.00 0.00 29.93 4.55
1737 1797 7.793427 GTGAATTTTGTTGTTCATTTGATTCCG 59.207 33.333 0.00 0.00 36.79 4.30
1738 1798 8.610896 TGTGAATTTTGTTGTTCATTTGATTCC 58.389 29.630 0.00 0.00 36.79 3.01
1745 1805 8.835439 GGGTTTATGTGAATTTTGTTGTTCATT 58.165 29.630 0.00 0.00 36.79 2.57
1746 1806 7.989741 TGGGTTTATGTGAATTTTGTTGTTCAT 59.010 29.630 0.00 0.00 36.79 2.57
1747 1807 7.278868 GTGGGTTTATGTGAATTTTGTTGTTCA 59.721 33.333 0.00 0.00 32.31 3.18
1748 1808 7.494298 AGTGGGTTTATGTGAATTTTGTTGTTC 59.506 33.333 0.00 0.00 0.00 3.18
1749 1809 7.334858 AGTGGGTTTATGTGAATTTTGTTGTT 58.665 30.769 0.00 0.00 0.00 2.83
1750 1810 6.883744 AGTGGGTTTATGTGAATTTTGTTGT 58.116 32.000 0.00 0.00 0.00 3.32
1751 1811 7.784633 AAGTGGGTTTATGTGAATTTTGTTG 57.215 32.000 0.00 0.00 0.00 3.33
1752 1812 9.320352 GTAAAGTGGGTTTATGTGAATTTTGTT 57.680 29.630 0.00 0.00 33.11 2.83
1753 1813 8.478877 TGTAAAGTGGGTTTATGTGAATTTTGT 58.521 29.630 0.00 0.00 33.11 2.83
1754 1814 8.879342 TGTAAAGTGGGTTTATGTGAATTTTG 57.121 30.769 0.00 0.00 33.11 2.44
1760 1820 9.521841 TGAATAATGTAAAGTGGGTTTATGTGA 57.478 29.630 0.00 0.00 33.11 3.58
1791 1851 8.450964 GCTGTTAATTTAGAACTTGTCTGCATA 58.549 33.333 0.00 0.00 37.12 3.14
1792 1852 7.308435 GCTGTTAATTTAGAACTTGTCTGCAT 58.692 34.615 0.00 0.00 37.12 3.96
1793 1853 6.293955 GGCTGTTAATTTAGAACTTGTCTGCA 60.294 38.462 0.00 0.00 37.12 4.41
1794 1854 6.072452 AGGCTGTTAATTTAGAACTTGTCTGC 60.072 38.462 0.00 0.00 37.12 4.26
1795 1855 7.301054 CAGGCTGTTAATTTAGAACTTGTCTG 58.699 38.462 6.28 0.00 37.12 3.51
1796 1856 6.072452 GCAGGCTGTTAATTTAGAACTTGTCT 60.072 38.462 17.16 0.00 40.71 3.41
1797 1857 6.086871 GCAGGCTGTTAATTTAGAACTTGTC 58.913 40.000 17.16 0.00 0.00 3.18
1798 1858 5.334879 CGCAGGCTGTTAATTTAGAACTTGT 60.335 40.000 17.16 0.00 0.00 3.16
1799 1859 5.088739 CGCAGGCTGTTAATTTAGAACTTG 58.911 41.667 17.16 0.00 0.00 3.16
1800 1860 4.379499 GCGCAGGCTGTTAATTTAGAACTT 60.379 41.667 17.16 0.00 35.83 2.66
1801 1861 3.127030 GCGCAGGCTGTTAATTTAGAACT 59.873 43.478 17.16 0.00 35.83 3.01
1802 1862 3.426323 GCGCAGGCTGTTAATTTAGAAC 58.574 45.455 17.16 0.00 35.83 3.01
1803 1863 2.095213 CGCGCAGGCTGTTAATTTAGAA 59.905 45.455 17.16 0.00 36.88 2.10
1804 1864 1.663643 CGCGCAGGCTGTTAATTTAGA 59.336 47.619 17.16 0.00 36.88 2.10
1805 1865 1.268032 CCGCGCAGGCTGTTAATTTAG 60.268 52.381 17.16 0.00 36.88 1.85
1806 1866 0.730265 CCGCGCAGGCTGTTAATTTA 59.270 50.000 17.16 0.00 36.88 1.40
1807 1867 0.958382 TCCGCGCAGGCTGTTAATTT 60.958 50.000 17.16 0.00 40.77 1.82
1808 1868 1.369091 CTCCGCGCAGGCTGTTAATT 61.369 55.000 17.16 0.00 40.77 1.40
1809 1869 1.815421 CTCCGCGCAGGCTGTTAAT 60.815 57.895 17.16 0.00 40.77 1.40
1810 1870 2.434185 CTCCGCGCAGGCTGTTAA 60.434 61.111 17.16 0.00 40.77 2.01
1811 1871 4.451150 CCTCCGCGCAGGCTGTTA 62.451 66.667 17.16 0.00 40.77 2.41
1820 1880 2.996168 AATAGTGCCATCCTCCGCGC 62.996 60.000 0.00 0.00 35.72 6.86
1821 1881 1.069765 AATAGTGCCATCCTCCGCG 59.930 57.895 0.00 0.00 0.00 6.46
1822 1882 0.886490 CCAATAGTGCCATCCTCCGC 60.886 60.000 0.00 0.00 0.00 5.54
1823 1883 0.886490 GCCAATAGTGCCATCCTCCG 60.886 60.000 0.00 0.00 0.00 4.63
1824 1884 0.183492 TGCCAATAGTGCCATCCTCC 59.817 55.000 0.00 0.00 0.00 4.30
1825 1885 2.057137 TTGCCAATAGTGCCATCCTC 57.943 50.000 0.00 0.00 0.00 3.71
1826 1886 2.025037 TCTTTGCCAATAGTGCCATCCT 60.025 45.455 0.00 0.00 0.00 3.24
1827 1887 2.099756 GTCTTTGCCAATAGTGCCATCC 59.900 50.000 0.00 0.00 0.00 3.51
1828 1888 3.019564 AGTCTTTGCCAATAGTGCCATC 58.980 45.455 0.00 0.00 0.00 3.51
1829 1889 2.756760 CAGTCTTTGCCAATAGTGCCAT 59.243 45.455 0.00 0.00 0.00 4.40
1830 1890 2.161855 CAGTCTTTGCCAATAGTGCCA 58.838 47.619 0.00 0.00 0.00 4.92
1831 1891 2.162408 GACAGTCTTTGCCAATAGTGCC 59.838 50.000 0.00 0.00 0.00 5.01
1832 1892 3.077359 AGACAGTCTTTGCCAATAGTGC 58.923 45.455 0.00 0.00 0.00 4.40
1833 1893 3.438087 CCAGACAGTCTTTGCCAATAGTG 59.562 47.826 0.00 0.00 0.00 2.74
1834 1894 3.679389 CCAGACAGTCTTTGCCAATAGT 58.321 45.455 0.00 0.00 0.00 2.12
1835 1895 2.421424 GCCAGACAGTCTTTGCCAATAG 59.579 50.000 0.00 0.00 0.00 1.73
1836 1896 2.436417 GCCAGACAGTCTTTGCCAATA 58.564 47.619 0.00 0.00 0.00 1.90
1837 1897 1.251251 GCCAGACAGTCTTTGCCAAT 58.749 50.000 0.00 0.00 0.00 3.16
1838 1898 1.165907 CGCCAGACAGTCTTTGCCAA 61.166 55.000 13.79 0.00 0.00 4.52
1839 1899 1.597854 CGCCAGACAGTCTTTGCCA 60.598 57.895 13.79 0.00 0.00 4.92
1840 1900 2.328099 CCGCCAGACAGTCTTTGCC 61.328 63.158 13.79 0.00 0.00 4.52
1841 1901 0.884704 TTCCGCCAGACAGTCTTTGC 60.885 55.000 0.00 6.06 0.00 3.68
1842 1902 1.264288 GTTTCCGCCAGACAGTCTTTG 59.736 52.381 0.00 0.00 0.00 2.77
1843 1903 1.594331 GTTTCCGCCAGACAGTCTTT 58.406 50.000 0.00 0.00 0.00 2.52
1844 1904 0.600255 CGTTTCCGCCAGACAGTCTT 60.600 55.000 0.00 0.00 0.00 3.01
1845 1905 1.006102 CGTTTCCGCCAGACAGTCT 60.006 57.895 0.00 0.00 0.00 3.24
1846 1906 3.550656 CGTTTCCGCCAGACAGTC 58.449 61.111 0.00 0.00 0.00 3.51
1872 1932 4.681978 AGACCCACCACGCTTCGC 62.682 66.667 0.00 0.00 0.00 4.70
1873 1933 2.432628 GAGACCCACCACGCTTCG 60.433 66.667 0.00 0.00 0.00 3.79
1874 1934 2.432628 CGAGACCCACCACGCTTC 60.433 66.667 0.00 0.00 0.00 3.86
1875 1935 4.681978 GCGAGACCCACCACGCTT 62.682 66.667 0.00 0.00 46.06 4.68
1878 1938 4.742201 CCAGCGAGACCCACCACG 62.742 72.222 0.00 0.00 0.00 4.94
1879 1939 4.394712 CCCAGCGAGACCCACCAC 62.395 72.222 0.00 0.00 0.00 4.16
1892 1952 1.845205 CCTCCCTATGCTCCCCCAG 60.845 68.421 0.00 0.00 0.00 4.45
1893 1953 1.908637 TTCCTCCCTATGCTCCCCCA 61.909 60.000 0.00 0.00 0.00 4.96
1894 1954 0.697854 TTTCCTCCCTATGCTCCCCC 60.698 60.000 0.00 0.00 0.00 5.40
1895 1955 0.767998 CTTTCCTCCCTATGCTCCCC 59.232 60.000 0.00 0.00 0.00 4.81
1896 1956 0.767998 CCTTTCCTCCCTATGCTCCC 59.232 60.000 0.00 0.00 0.00 4.30
1897 1957 0.767998 CCCTTTCCTCCCTATGCTCC 59.232 60.000 0.00 0.00 0.00 4.70
1898 1958 0.767998 CCCCTTTCCTCCCTATGCTC 59.232 60.000 0.00 0.00 0.00 4.26
1899 1959 0.699231 CCCCCTTTCCTCCCTATGCT 60.699 60.000 0.00 0.00 0.00 3.79
1900 1960 1.846973 CCCCCTTTCCTCCCTATGC 59.153 63.158 0.00 0.00 0.00 3.14
1901 1961 1.720077 GGCCCCCTTTCCTCCCTATG 61.720 65.000 0.00 0.00 0.00 2.23
1902 1962 1.387492 GGCCCCCTTTCCTCCCTAT 60.387 63.158 0.00 0.00 0.00 2.57
1903 1963 2.043941 GGCCCCCTTTCCTCCCTA 59.956 66.667 0.00 0.00 0.00 3.53
1907 1967 3.335729 TTCGGGCCCCCTTTCCTC 61.336 66.667 18.66 0.00 0.00 3.71
1908 1968 3.658422 GTTCGGGCCCCCTTTCCT 61.658 66.667 18.66 0.00 0.00 3.36
1917 1977 3.952628 CTCTTCCACCGTTCGGGCC 62.953 68.421 15.66 0.00 40.62 5.80
1918 1978 2.434359 CTCTTCCACCGTTCGGGC 60.434 66.667 15.66 0.00 40.62 6.13
1919 1979 2.434359 GCTCTTCCACCGTTCGGG 60.434 66.667 15.66 4.73 43.62 5.14
1920 1980 2.434359 GGCTCTTCCACCGTTCGG 60.434 66.667 9.81 9.81 34.01 4.30
1921 1981 1.738099 CTGGCTCTTCCACCGTTCG 60.738 63.158 0.00 0.00 40.72 3.95
1922 1982 1.376037 CCTGGCTCTTCCACCGTTC 60.376 63.158 0.00 0.00 40.72 3.95
1923 1983 2.750350 CCTGGCTCTTCCACCGTT 59.250 61.111 0.00 0.00 40.72 4.44
1924 1984 3.322466 CCCTGGCTCTTCCACCGT 61.322 66.667 0.00 0.00 40.72 4.83
1925 1985 4.101448 CCCCTGGCTCTTCCACCG 62.101 72.222 0.00 0.00 40.72 4.94
1926 1986 2.203549 CTTCCCCTGGCTCTTCCACC 62.204 65.000 0.00 0.00 40.72 4.61
1927 1987 1.301293 CTTCCCCTGGCTCTTCCAC 59.699 63.158 0.00 0.00 40.72 4.02
1928 1988 2.606587 GCTTCCCCTGGCTCTTCCA 61.607 63.158 0.00 0.00 44.18 3.53
1929 1989 2.273776 GCTTCCCCTGGCTCTTCC 59.726 66.667 0.00 0.00 0.00 3.46
1930 1990 2.273776 GGCTTCCCCTGGCTCTTC 59.726 66.667 0.00 0.00 0.00 2.87
1931 1991 3.721706 CGGCTTCCCCTGGCTCTT 61.722 66.667 0.00 0.00 0.00 2.85
1937 1997 2.499303 AAATGACCCGGCTTCCCCTG 62.499 60.000 0.00 0.00 0.00 4.45
1938 1998 2.238701 AAATGACCCGGCTTCCCCT 61.239 57.895 0.00 0.00 0.00 4.79
1939 1999 2.052104 CAAATGACCCGGCTTCCCC 61.052 63.158 0.00 0.00 0.00 4.81
1940 2000 0.610785 TTCAAATGACCCGGCTTCCC 60.611 55.000 0.00 0.00 0.00 3.97
1941 2001 0.811281 CTTCAAATGACCCGGCTTCC 59.189 55.000 0.00 0.00 0.00 3.46
1942 2002 0.811281 CCTTCAAATGACCCGGCTTC 59.189 55.000 0.00 0.00 0.00 3.86
1943 2003 0.404040 TCCTTCAAATGACCCGGCTT 59.596 50.000 0.00 0.00 0.00 4.35
1944 2004 0.404040 TTCCTTCAAATGACCCGGCT 59.596 50.000 0.00 0.00 0.00 5.52
1945 2005 1.253100 TTTCCTTCAAATGACCCGGC 58.747 50.000 0.00 0.00 0.00 6.13
1953 2013 3.763897 CGGTCCTTCCATTTCCTTCAAAT 59.236 43.478 0.00 0.00 34.79 2.32
1954 2014 3.153919 CGGTCCTTCCATTTCCTTCAAA 58.846 45.455 0.00 0.00 35.57 2.69
1955 2015 2.373836 TCGGTCCTTCCATTTCCTTCAA 59.626 45.455 0.00 0.00 35.57 2.69
1956 2016 1.982226 TCGGTCCTTCCATTTCCTTCA 59.018 47.619 0.00 0.00 35.57 3.02
1957 2017 2.633488 CTCGGTCCTTCCATTTCCTTC 58.367 52.381 0.00 0.00 35.57 3.46
1958 2018 1.340114 GCTCGGTCCTTCCATTTCCTT 60.340 52.381 0.00 0.00 35.57 3.36
1959 2019 0.253327 GCTCGGTCCTTCCATTTCCT 59.747 55.000 0.00 0.00 35.57 3.36
1960 2020 1.090052 CGCTCGGTCCTTCCATTTCC 61.090 60.000 0.00 0.00 35.57 3.13
1961 2021 1.090052 CCGCTCGGTCCTTCCATTTC 61.090 60.000 0.00 0.00 35.57 2.17
1962 2022 1.078426 CCGCTCGGTCCTTCCATTT 60.078 57.895 0.00 0.00 35.57 2.32
1963 2023 2.584608 CCGCTCGGTCCTTCCATT 59.415 61.111 0.00 0.00 35.57 3.16
1964 2024 4.162690 GCCGCTCGGTCCTTCCAT 62.163 66.667 10.24 0.00 37.65 3.41
1966 2026 4.516195 GAGCCGCTCGGTCCTTCC 62.516 72.222 4.23 0.00 37.65 3.46
1967 2027 2.579684 AATGAGCCGCTCGGTCCTTC 62.580 60.000 15.58 4.22 38.27 3.46
1968 2028 2.579684 GAATGAGCCGCTCGGTCCTT 62.580 60.000 15.58 4.16 38.27 3.36
1969 2029 3.077556 AATGAGCCGCTCGGTCCT 61.078 61.111 15.58 0.00 38.27 3.85
1970 2030 2.586357 GAATGAGCCGCTCGGTCC 60.586 66.667 15.58 1.52 38.27 4.46
1971 2031 2.956964 CGAATGAGCCGCTCGGTC 60.957 66.667 15.58 13.22 39.57 4.79
1972 2032 3.296709 AACGAATGAGCCGCTCGGT 62.297 57.895 15.58 5.63 36.90 4.69
1973 2033 2.509336 AACGAATGAGCCGCTCGG 60.509 61.111 15.58 3.56 36.90 4.63
1974 2034 1.078759 AAGAACGAATGAGCCGCTCG 61.079 55.000 15.58 7.03 38.53 5.03
1975 2035 1.922570 TAAGAACGAATGAGCCGCTC 58.077 50.000 13.81 13.81 0.00 5.03
1976 2036 2.474816 GATAAGAACGAATGAGCCGCT 58.525 47.619 0.00 0.00 0.00 5.52
1977 2037 1.527311 GGATAAGAACGAATGAGCCGC 59.473 52.381 0.00 0.00 0.00 6.53
1978 2038 2.135933 GGGATAAGAACGAATGAGCCG 58.864 52.381 0.00 0.00 0.00 5.52
1979 2039 2.872858 GTGGGATAAGAACGAATGAGCC 59.127 50.000 0.00 0.00 0.00 4.70
1980 2040 3.798202 AGTGGGATAAGAACGAATGAGC 58.202 45.455 0.00 0.00 0.00 4.26
1981 2041 6.150396 AGTAGTGGGATAAGAACGAATGAG 57.850 41.667 0.00 0.00 0.00 2.90
1982 2042 6.264744 CCTAGTAGTGGGATAAGAACGAATGA 59.735 42.308 0.00 0.00 0.00 2.57
1983 2043 6.448006 CCTAGTAGTGGGATAAGAACGAATG 58.552 44.000 0.00 0.00 0.00 2.67
1984 2044 6.651975 CCTAGTAGTGGGATAAGAACGAAT 57.348 41.667 0.00 0.00 0.00 3.34
1996 2056 5.970501 ATAAGGTTTTCCCTAGTAGTGGG 57.029 43.478 0.00 0.00 45.47 4.61
1997 2057 7.093201 TGTGTATAAGGTTTTCCCTAGTAGTGG 60.093 40.741 0.00 0.00 45.47 4.00
1998 2058 7.844009 TGTGTATAAGGTTTTCCCTAGTAGTG 58.156 38.462 0.00 0.00 45.47 2.74
1999 2059 7.897565 TCTGTGTATAAGGTTTTCCCTAGTAGT 59.102 37.037 0.00 0.00 45.47 2.73
2000 2060 8.302515 TCTGTGTATAAGGTTTTCCCTAGTAG 57.697 38.462 0.00 0.00 45.47 2.57
2001 2061 8.669055 TTCTGTGTATAAGGTTTTCCCTAGTA 57.331 34.615 0.00 0.00 45.47 1.82
2002 2062 7.563724 TTCTGTGTATAAGGTTTTCCCTAGT 57.436 36.000 0.00 0.00 45.47 2.57
2003 2063 8.101419 AGTTTCTGTGTATAAGGTTTTCCCTAG 58.899 37.037 0.00 0.00 45.47 3.02
2004 2064 7.981142 AGTTTCTGTGTATAAGGTTTTCCCTA 58.019 34.615 0.00 0.00 45.47 3.53
2006 2066 7.520451 AAGTTTCTGTGTATAAGGTTTTCCC 57.480 36.000 0.00 0.00 41.86 3.97
2007 2067 8.235226 GCTAAGTTTCTGTGTATAAGGTTTTCC 58.765 37.037 0.00 0.00 41.05 3.13
2008 2068 8.780249 TGCTAAGTTTCTGTGTATAAGGTTTTC 58.220 33.333 0.00 0.00 0.00 2.29
2009 2069 8.685838 TGCTAAGTTTCTGTGTATAAGGTTTT 57.314 30.769 0.00 0.00 0.00 2.43
2010 2070 7.937394 ACTGCTAAGTTTCTGTGTATAAGGTTT 59.063 33.333 0.00 0.00 30.14 3.27
2011 2071 7.450903 ACTGCTAAGTTTCTGTGTATAAGGTT 58.549 34.615 0.00 0.00 30.14 3.50
2012 2072 7.005709 ACTGCTAAGTTTCTGTGTATAAGGT 57.994 36.000 0.00 0.00 30.14 3.50
2013 2073 8.251721 ACTACTGCTAAGTTTCTGTGTATAAGG 58.748 37.037 0.00 0.00 37.88 2.69
2014 2074 9.077674 CACTACTGCTAAGTTTCTGTGTATAAG 57.922 37.037 0.00 0.00 37.88 1.73
2015 2075 7.544566 GCACTACTGCTAAGTTTCTGTGTATAA 59.455 37.037 0.00 0.00 40.63 0.98
2016 2076 7.033791 GCACTACTGCTAAGTTTCTGTGTATA 58.966 38.462 0.00 0.00 40.63 1.47
2017 2077 5.869888 GCACTACTGCTAAGTTTCTGTGTAT 59.130 40.000 0.00 0.00 40.63 2.29
2018 2078 5.227908 GCACTACTGCTAAGTTTCTGTGTA 58.772 41.667 0.00 0.00 40.63 2.90
2019 2079 4.058817 GCACTACTGCTAAGTTTCTGTGT 58.941 43.478 0.00 0.00 40.63 3.72
2020 2080 4.653806 GCACTACTGCTAAGTTTCTGTG 57.346 45.455 0.00 0.00 40.63 3.66
2032 2092 2.095059 CCATTTTGACCAGCACTACTGC 60.095 50.000 0.00 0.00 45.78 4.40
2033 2093 2.489329 CCCATTTTGACCAGCACTACTG 59.511 50.000 0.00 0.00 46.77 2.74
2034 2094 2.555227 CCCCATTTTGACCAGCACTACT 60.555 50.000 0.00 0.00 0.00 2.57
2035 2095 1.818674 CCCCATTTTGACCAGCACTAC 59.181 52.381 0.00 0.00 0.00 2.73
2036 2096 1.890573 GCCCCATTTTGACCAGCACTA 60.891 52.381 0.00 0.00 0.00 2.74
2037 2097 1.187567 GCCCCATTTTGACCAGCACT 61.188 55.000 0.00 0.00 0.00 4.40
2038 2098 1.293179 GCCCCATTTTGACCAGCAC 59.707 57.895 0.00 0.00 0.00 4.40
2039 2099 2.274645 CGCCCCATTTTGACCAGCA 61.275 57.895 0.00 0.00 0.00 4.41
2040 2100 2.573340 CGCCCCATTTTGACCAGC 59.427 61.111 0.00 0.00 0.00 4.85
2041 2101 0.679640 TAGCGCCCCATTTTGACCAG 60.680 55.000 2.29 0.00 0.00 4.00
2042 2102 0.963355 GTAGCGCCCCATTTTGACCA 60.963 55.000 2.29 0.00 0.00 4.02
2043 2103 0.679960 AGTAGCGCCCCATTTTGACC 60.680 55.000 2.29 0.00 0.00 4.02
2044 2104 0.451783 CAGTAGCGCCCCATTTTGAC 59.548 55.000 2.29 0.00 0.00 3.18
2045 2105 1.312371 GCAGTAGCGCCCCATTTTGA 61.312 55.000 2.29 0.00 0.00 2.69
2046 2106 1.139520 GCAGTAGCGCCCCATTTTG 59.860 57.895 2.29 0.00 0.00 2.44
2047 2107 3.603365 GCAGTAGCGCCCCATTTT 58.397 55.556 2.29 0.00 0.00 1.82
2052 2112 6.063461 ACTACTAATTAGCAGTAGCGCCCC 62.063 50.000 15.45 0.00 46.25 5.80
2053 2113 3.005578 ACTACTAATTAGCAGTAGCGCCC 59.994 47.826 15.45 0.00 46.25 6.13
2054 2114 4.240175 ACTACTAATTAGCAGTAGCGCC 57.760 45.455 15.45 0.00 46.25 6.53
2058 2118 5.080731 CGCGCTACTACTAATTAGCAGTAG 58.919 45.833 31.74 31.74 46.17 2.57
2059 2119 4.512944 ACGCGCTACTACTAATTAGCAGTA 59.487 41.667 19.87 19.87 40.75 2.74
2060 2120 3.314635 ACGCGCTACTACTAATTAGCAGT 59.685 43.478 19.77 19.77 40.75 4.40
2061 2121 3.664486 CACGCGCTACTACTAATTAGCAG 59.336 47.826 12.54 11.53 40.75 4.24
2062 2122 3.065786 ACACGCGCTACTACTAATTAGCA 59.934 43.478 12.54 0.00 40.75 3.49
2063 2123 3.625938 ACACGCGCTACTACTAATTAGC 58.374 45.455 12.54 0.00 37.87 3.09
2064 2124 4.669728 GTGACACGCGCTACTACTAATTAG 59.330 45.833 5.73 11.05 0.00 1.73
2065 2125 4.333649 AGTGACACGCGCTACTACTAATTA 59.666 41.667 5.73 0.00 35.06 1.40
2066 2126 3.128242 AGTGACACGCGCTACTACTAATT 59.872 43.478 5.73 0.00 35.06 1.40
2067 2127 2.681848 AGTGACACGCGCTACTACTAAT 59.318 45.455 5.73 0.00 35.06 1.73
2068 2128 2.079158 AGTGACACGCGCTACTACTAA 58.921 47.619 5.73 0.00 35.06 2.24
2069 2129 1.730501 AGTGACACGCGCTACTACTA 58.269 50.000 5.73 0.00 35.06 1.82
2070 2130 1.730501 TAGTGACACGCGCTACTACT 58.269 50.000 5.73 7.45 38.54 2.57
2071 2131 2.532531 TTAGTGACACGCGCTACTAC 57.467 50.000 5.73 0.00 39.21 2.73
2072 2132 2.730090 GCTTTAGTGACACGCGCTACTA 60.730 50.000 5.73 7.15 39.21 1.82
2073 2133 1.978542 CTTTAGTGACACGCGCTACT 58.021 50.000 5.73 8.23 39.21 2.57
2074 2134 0.365859 GCTTTAGTGACACGCGCTAC 59.634 55.000 5.73 0.00 39.21 3.58
2075 2135 0.038983 TGCTTTAGTGACACGCGCTA 60.039 50.000 5.73 0.00 38.54 4.26
2076 2136 1.300620 TGCTTTAGTGACACGCGCT 60.301 52.632 5.73 0.00 41.11 5.92
2077 2137 1.154654 GTGCTTTAGTGACACGCGC 60.155 57.895 5.73 0.00 0.00 6.86
2081 2141 2.400399 TGTAGCGTGCTTTAGTGACAC 58.600 47.619 0.00 0.00 0.00 3.67
2082 2142 2.295070 TCTGTAGCGTGCTTTAGTGACA 59.705 45.455 0.00 0.00 0.00 3.58
2083 2143 2.942710 TCTGTAGCGTGCTTTAGTGAC 58.057 47.619 0.00 0.00 0.00 3.67
2084 2144 3.868757 ATCTGTAGCGTGCTTTAGTGA 57.131 42.857 0.00 0.00 0.00 3.41
2085 2145 4.445718 CCATATCTGTAGCGTGCTTTAGTG 59.554 45.833 0.00 0.00 0.00 2.74
2086 2146 4.099573 ACCATATCTGTAGCGTGCTTTAGT 59.900 41.667 0.00 0.00 0.00 2.24
2087 2147 4.621991 ACCATATCTGTAGCGTGCTTTAG 58.378 43.478 0.00 0.00 0.00 1.85
2088 2148 4.665833 ACCATATCTGTAGCGTGCTTTA 57.334 40.909 0.00 0.00 0.00 1.85
2089 2149 3.543680 ACCATATCTGTAGCGTGCTTT 57.456 42.857 0.00 0.00 0.00 3.51
2090 2150 3.543680 AACCATATCTGTAGCGTGCTT 57.456 42.857 0.00 0.00 0.00 3.91
2091 2151 4.873746 ATAACCATATCTGTAGCGTGCT 57.126 40.909 0.00 0.00 0.00 4.40
2092 2152 4.563184 GCTATAACCATATCTGTAGCGTGC 59.437 45.833 0.00 0.00 0.00 5.34
2093 2153 5.709966 TGCTATAACCATATCTGTAGCGTG 58.290 41.667 0.00 0.00 32.51 5.34
2094 2154 5.477291 ACTGCTATAACCATATCTGTAGCGT 59.523 40.000 0.00 0.00 32.51 5.07
2095 2155 5.955488 ACTGCTATAACCATATCTGTAGCG 58.045 41.667 0.00 0.00 32.51 4.26
2096 2156 6.975772 GCTACTGCTATAACCATATCTGTAGC 59.024 42.308 15.41 15.41 44.62 3.58
2097 2157 7.190191 CGCTACTGCTATAACCATATCTGTAG 58.810 42.308 0.00 0.00 37.82 2.74
2098 2158 6.404403 GCGCTACTGCTATAACCATATCTGTA 60.404 42.308 0.00 0.00 36.97 2.74
2099 2159 5.622460 GCGCTACTGCTATAACCATATCTGT 60.622 44.000 0.00 0.00 36.97 3.41
2100 2160 4.800993 GCGCTACTGCTATAACCATATCTG 59.199 45.833 0.00 0.00 36.97 2.90
2101 2161 4.438880 CGCGCTACTGCTATAACCATATCT 60.439 45.833 5.56 0.00 36.97 1.98
2102 2162 3.791887 CGCGCTACTGCTATAACCATATC 59.208 47.826 5.56 0.00 36.97 1.63
2103 2163 3.192844 ACGCGCTACTGCTATAACCATAT 59.807 43.478 5.73 0.00 36.97 1.78
2104 2164 2.555325 ACGCGCTACTGCTATAACCATA 59.445 45.455 5.73 0.00 36.97 2.74
2105 2165 1.340248 ACGCGCTACTGCTATAACCAT 59.660 47.619 5.73 0.00 36.97 3.55
2106 2166 0.742505 ACGCGCTACTGCTATAACCA 59.257 50.000 5.73 0.00 36.97 3.67
2107 2167 1.001597 AGACGCGCTACTGCTATAACC 60.002 52.381 5.73 0.00 36.97 2.85
2108 2168 2.044860 CAGACGCGCTACTGCTATAAC 58.955 52.381 5.73 0.00 36.97 1.89
2109 2169 2.401017 CAGACGCGCTACTGCTATAA 57.599 50.000 5.73 0.00 36.97 0.98
2115 2175 1.277326 TTATTGCAGACGCGCTACTG 58.723 50.000 20.78 20.78 42.97 2.74
2116 2176 2.004583 TTTATTGCAGACGCGCTACT 57.995 45.000 5.73 0.00 42.97 2.57
2117 2177 2.798834 TTTTATTGCAGACGCGCTAC 57.201 45.000 5.73 0.00 42.97 3.58
2118 2178 2.475519 GCTTTTTATTGCAGACGCGCTA 60.476 45.455 5.73 0.00 42.97 4.26
2119 2179 1.729149 GCTTTTTATTGCAGACGCGCT 60.729 47.619 5.73 0.50 42.97 5.92
2120 2180 0.635231 GCTTTTTATTGCAGACGCGC 59.365 50.000 5.73 0.00 42.97 6.86
2121 2181 0.900547 CGCTTTTTATTGCAGACGCG 59.099 50.000 3.53 3.53 42.97 6.01
2122 2182 1.259316 CCGCTTTTTATTGCAGACGC 58.741 50.000 0.00 0.00 39.24 5.19
2123 2183 2.611974 ACCGCTTTTTATTGCAGACG 57.388 45.000 0.00 0.00 0.00 4.18
2124 2184 4.680171 AGTACCGCTTTTTATTGCAGAC 57.320 40.909 0.00 0.00 0.00 3.51
2125 2185 5.484715 AGTAGTACCGCTTTTTATTGCAGA 58.515 37.500 0.00 0.00 0.00 4.26
2126 2186 5.796350 AGTAGTACCGCTTTTTATTGCAG 57.204 39.130 0.00 0.00 0.00 4.41
2127 2187 8.945481 TTATAGTAGTACCGCTTTTTATTGCA 57.055 30.769 0.00 0.00 0.00 4.08
2131 2191 9.716531 GGGAATTATAGTAGTACCGCTTTTTAT 57.283 33.333 0.00 0.00 0.00 1.40
2132 2192 8.703743 TGGGAATTATAGTAGTACCGCTTTTTA 58.296 33.333 0.00 0.00 0.00 1.52
2133 2193 7.496920 GTGGGAATTATAGTAGTACCGCTTTTT 59.503 37.037 0.00 0.00 0.00 1.94
2134 2194 6.988580 GTGGGAATTATAGTAGTACCGCTTTT 59.011 38.462 0.00 0.00 0.00 2.27
2135 2195 6.098695 TGTGGGAATTATAGTAGTACCGCTTT 59.901 38.462 0.00 0.00 0.00 3.51
2136 2196 5.599656 TGTGGGAATTATAGTAGTACCGCTT 59.400 40.000 0.00 0.00 0.00 4.68
2137 2197 5.010415 GTGTGGGAATTATAGTAGTACCGCT 59.990 44.000 0.00 0.00 0.00 5.52
2138 2198 5.010415 AGTGTGGGAATTATAGTAGTACCGC 59.990 44.000 0.00 0.00 0.00 5.68
2139 2199 6.645790 AGTGTGGGAATTATAGTAGTACCG 57.354 41.667 0.00 0.00 0.00 4.02
2140 2200 9.106070 CAAAAGTGTGGGAATTATAGTAGTACC 57.894 37.037 0.00 0.00 0.00 3.34
2141 2201 9.662947 ACAAAAGTGTGGGAATTATAGTAGTAC 57.337 33.333 0.00 0.00 36.31 2.73
2142 2202 9.880157 GACAAAAGTGTGGGAATTATAGTAGTA 57.120 33.333 0.00 0.00 38.41 1.82
2143 2203 7.548075 CGACAAAAGTGTGGGAATTATAGTAGT 59.452 37.037 0.00 0.00 38.41 2.73
2144 2204 7.906160 CGACAAAAGTGTGGGAATTATAGTAG 58.094 38.462 0.00 0.00 38.41 2.57
2145 2205 7.837202 CGACAAAAGTGTGGGAATTATAGTA 57.163 36.000 0.00 0.00 38.41 1.82
2146 2206 6.737254 CGACAAAAGTGTGGGAATTATAGT 57.263 37.500 0.00 0.00 38.41 2.12
2156 2216 0.872388 GCCTACCGACAAAAGTGTGG 59.128 55.000 0.00 0.00 38.41 4.17
2157 2217 1.878953 AGCCTACCGACAAAAGTGTG 58.121 50.000 0.00 0.00 38.41 3.82
2158 2218 2.028385 CCTAGCCTACCGACAAAAGTGT 60.028 50.000 0.00 0.00 42.10 3.55
2159 2219 2.232941 TCCTAGCCTACCGACAAAAGTG 59.767 50.000 0.00 0.00 0.00 3.16
2160 2220 2.532843 TCCTAGCCTACCGACAAAAGT 58.467 47.619 0.00 0.00 0.00 2.66
2161 2221 3.604875 TTCCTAGCCTACCGACAAAAG 57.395 47.619 0.00 0.00 0.00 2.27
2162 2222 4.713321 ACTATTCCTAGCCTACCGACAAAA 59.287 41.667 0.00 0.00 0.00 2.44
2163 2223 4.284178 ACTATTCCTAGCCTACCGACAAA 58.716 43.478 0.00 0.00 0.00 2.83
2164 2224 3.907221 ACTATTCCTAGCCTACCGACAA 58.093 45.455 0.00 0.00 0.00 3.18
2165 2225 3.589951 ACTATTCCTAGCCTACCGACA 57.410 47.619 0.00 0.00 0.00 4.35
2166 2226 4.650734 ACTACTATTCCTAGCCTACCGAC 58.349 47.826 0.00 0.00 0.00 4.79
2167 2227 4.989875 ACTACTATTCCTAGCCTACCGA 57.010 45.455 0.00 0.00 0.00 4.69
2168 2228 4.635324 GCTACTACTATTCCTAGCCTACCG 59.365 50.000 0.00 0.00 0.00 4.02
2169 2229 4.635324 CGCTACTACTATTCCTAGCCTACC 59.365 50.000 0.00 0.00 0.00 3.18
2170 2230 5.486526 TCGCTACTACTATTCCTAGCCTAC 58.513 45.833 0.00 0.00 0.00 3.18
2171 2231 5.752036 TCGCTACTACTATTCCTAGCCTA 57.248 43.478 0.00 0.00 0.00 3.93
2172 2232 4.637387 TCGCTACTACTATTCCTAGCCT 57.363 45.455 0.00 0.00 0.00 4.58
2173 2233 4.439016 GCATCGCTACTACTATTCCTAGCC 60.439 50.000 0.00 0.00 0.00 3.93
2174 2234 4.156190 TGCATCGCTACTACTATTCCTAGC 59.844 45.833 0.00 0.00 0.00 3.42
2175 2235 5.881777 TGCATCGCTACTACTATTCCTAG 57.118 43.478 0.00 0.00 0.00 3.02
2176 2236 6.489022 TCTTTGCATCGCTACTACTATTCCTA 59.511 38.462 0.00 0.00 0.00 2.94
2177 2237 5.302059 TCTTTGCATCGCTACTACTATTCCT 59.698 40.000 0.00 0.00 0.00 3.36
2178 2238 5.529791 TCTTTGCATCGCTACTACTATTCC 58.470 41.667 0.00 0.00 0.00 3.01
2179 2239 7.464830 TTTCTTTGCATCGCTACTACTATTC 57.535 36.000 0.00 0.00 0.00 1.75
2180 2240 7.011482 CCTTTTCTTTGCATCGCTACTACTATT 59.989 37.037 0.00 0.00 0.00 1.73
2181 2241 6.480320 CCTTTTCTTTGCATCGCTACTACTAT 59.520 38.462 0.00 0.00 0.00 2.12
2182 2242 5.810587 CCTTTTCTTTGCATCGCTACTACTA 59.189 40.000 0.00 0.00 0.00 1.82
2183 2243 4.631813 CCTTTTCTTTGCATCGCTACTACT 59.368 41.667 0.00 0.00 0.00 2.57
2184 2244 4.630069 TCCTTTTCTTTGCATCGCTACTAC 59.370 41.667 0.00 0.00 0.00 2.73
2185 2245 4.630069 GTCCTTTTCTTTGCATCGCTACTA 59.370 41.667 0.00 0.00 0.00 1.82
2186 2246 3.437049 GTCCTTTTCTTTGCATCGCTACT 59.563 43.478 0.00 0.00 0.00 2.57
2187 2247 3.725010 CGTCCTTTTCTTTGCATCGCTAC 60.725 47.826 0.00 0.00 0.00 3.58
2188 2248 2.415168 CGTCCTTTTCTTTGCATCGCTA 59.585 45.455 0.00 0.00 0.00 4.26
2189 2249 1.197721 CGTCCTTTTCTTTGCATCGCT 59.802 47.619 0.00 0.00 0.00 4.93
2190 2250 1.069227 ACGTCCTTTTCTTTGCATCGC 60.069 47.619 0.00 0.00 0.00 4.58
2191 2251 2.969443 ACGTCCTTTTCTTTGCATCG 57.031 45.000 0.00 0.00 0.00 3.84
2192 2252 4.473199 GGTAACGTCCTTTTCTTTGCATC 58.527 43.478 0.00 0.00 0.00 3.91
2193 2253 4.499037 GGTAACGTCCTTTTCTTTGCAT 57.501 40.909 0.00 0.00 0.00 3.96
2194 2254 3.974871 GGTAACGTCCTTTTCTTTGCA 57.025 42.857 0.00 0.00 0.00 4.08
2220 2280 1.792006 AACACGCTACTACAAGGCAC 58.208 50.000 0.00 0.00 0.00 5.01
2221 2281 2.536761 AAACACGCTACTACAAGGCA 57.463 45.000 0.00 0.00 0.00 4.75
2222 2282 3.367025 CAGTAAACACGCTACTACAAGGC 59.633 47.826 0.00 0.00 0.00 4.35
2223 2283 4.553323 ACAGTAAACACGCTACTACAAGG 58.447 43.478 0.00 0.00 0.00 3.61
2224 2284 8.393366 TCTATACAGTAAACACGCTACTACAAG 58.607 37.037 0.00 0.00 0.00 3.16
2225 2285 8.267620 TCTATACAGTAAACACGCTACTACAA 57.732 34.615 0.00 0.00 0.00 2.41
2226 2286 7.466455 GCTCTATACAGTAAACACGCTACTACA 60.466 40.741 0.00 0.00 0.00 2.74
2227 2287 6.850317 GCTCTATACAGTAAACACGCTACTAC 59.150 42.308 0.00 0.00 0.00 2.73
2228 2288 6.292542 CGCTCTATACAGTAAACACGCTACTA 60.293 42.308 0.00 0.00 0.00 1.82
2229 2289 5.503683 CGCTCTATACAGTAAACACGCTACT 60.504 44.000 0.00 0.00 0.00 2.57
2230 2290 4.669728 CGCTCTATACAGTAAACACGCTAC 59.330 45.833 0.00 0.00 0.00 3.58
2231 2291 4.787563 GCGCTCTATACAGTAAACACGCTA 60.788 45.833 0.00 0.00 39.52 4.26
2232 2292 3.692576 CGCTCTATACAGTAAACACGCT 58.307 45.455 0.00 0.00 0.00 5.07
2233 2293 2.215812 GCGCTCTATACAGTAAACACGC 59.784 50.000 0.00 0.00 35.57 5.34
2234 2294 3.692576 AGCGCTCTATACAGTAAACACG 58.307 45.455 2.64 0.00 0.00 4.49
2235 2295 5.681982 CAGTAGCGCTCTATACAGTAAACAC 59.318 44.000 16.34 0.02 0.00 3.32
2236 2296 5.732528 GCAGTAGCGCTCTATACAGTAAACA 60.733 44.000 16.34 0.00 0.00 2.83
2237 2297 4.676018 GCAGTAGCGCTCTATACAGTAAAC 59.324 45.833 16.34 0.82 0.00 2.01
2238 2298 4.856664 GCAGTAGCGCTCTATACAGTAAA 58.143 43.478 16.34 0.00 0.00 2.01
2239 2299 4.485024 GCAGTAGCGCTCTATACAGTAA 57.515 45.455 16.34 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.