Multiple sequence alignment - TraesCS2B01G448900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G448900 chr2B 100.000 2177 0 0 1 2177 641858653 641860829 0.000000e+00 4021
1 TraesCS2B01G448900 chr6D 98.106 1109 21 0 248 1356 389254676 389253568 0.000000e+00 1932
2 TraesCS2B01G448900 chr6D 97.836 1109 24 0 248 1356 389249881 389248773 0.000000e+00 1916
3 TraesCS2B01G448900 chr6D 92.925 424 19 5 1491 1913 431006231 431005818 6.650000e-170 606
4 TraesCS2B01G448900 chr6D 98.519 270 3 1 1909 2177 168246294 168246563 1.960000e-130 475
5 TraesCS2B01G448900 chr5D 98.106 1109 20 1 248 1356 503238533 503237426 0.000000e+00 1930
6 TraesCS2B01G448900 chr5D 98.016 1109 21 1 248 1356 503242782 503241675 0.000000e+00 1925
7 TraesCS2B01G448900 chr5D 97.836 1109 24 0 248 1356 503228755 503227647 0.000000e+00 1916
8 TraesCS2B01G448900 chr5D 93.632 424 17 5 1491 1913 503254833 503254419 1.830000e-175 625
9 TraesCS2B01G448900 chr5D 98.885 269 3 0 1909 2177 560879561 560879829 4.200000e-132 481
10 TraesCS2B01G448900 chr5D 95.862 145 5 1 1353 1497 352066440 352066297 1.300000e-57 233
11 TraesCS2B01G448900 chr3A 98.016 1109 22 0 248 1356 66007625 66008733 0.000000e+00 1927
12 TraesCS2B01G448900 chr7B 98.016 1109 21 1 248 1356 663101918 663103025 0.000000e+00 1925
13 TraesCS2B01G448900 chr7B 97.241 145 3 1 1353 1497 662738084 662738227 6.000000e-61 244
14 TraesCS2B01G448900 chr7B 96.552 145 4 1 1353 1497 662737004 662736861 2.790000e-59 239
15 TraesCS2B01G448900 chr1D 97.926 1109 23 0 248 1356 51916750 51917858 0.000000e+00 1921
16 TraesCS2B01G448900 chr1D 93.412 425 11 7 1492 1913 200552965 200552555 3.970000e-172 614
17 TraesCS2B01G448900 chr1D 98.513 269 4 0 1909 2177 144237799 144238067 1.960000e-130 475
18 TraesCS2B01G448900 chr3D 97.926 1109 22 1 248 1356 589266016 589267123 0.000000e+00 1919
19 TraesCS2B01G448900 chr3D 94.811 424 12 5 1491 1913 158939293 158938879 0.000000e+00 652
20 TraesCS2B01G448900 chr3D 93.160 424 19 4 1491 1913 589250273 589249859 3.970000e-172 614
21 TraesCS2B01G448900 chr5A 95.550 427 8 4 1491 1913 482021950 482022369 0.000000e+00 673
22 TraesCS2B01G448900 chr5B 95.519 424 9 4 1491 1913 429065662 429065248 0.000000e+00 669
23 TraesCS2B01G448900 chr5B 95.172 145 6 1 1353 1497 432876208 432876065 6.050000e-56 228
24 TraesCS2B01G448900 chrUn 93.632 424 17 5 1491 1913 341019158 341019572 1.830000e-175 625
25 TraesCS2B01G448900 chrUn 92.453 424 16 4 1491 1913 362350808 362351216 1.860000e-165 592
26 TraesCS2B01G448900 chrUn 99.257 269 2 0 1909 2177 93417255 93416987 9.030000e-134 486
27 TraesCS2B01G448900 chrUn 99.257 269 2 0 1909 2177 278886407 278886139 9.030000e-134 486
28 TraesCS2B01G448900 chrUn 99.257 269 2 0 1909 2177 327660787 327660519 9.030000e-134 486
29 TraesCS2B01G448900 chrUn 98.513 269 4 0 1909 2177 97067419 97067151 1.960000e-130 475
30 TraesCS2B01G448900 chr2D 99.257 269 2 0 1909 2177 272799141 272798873 9.030000e-134 486
31 TraesCS2B01G448900 chr2D 96.552 145 3 2 1353 1497 196964261 196964403 2.790000e-59 239
32 TraesCS2B01G448900 chr7A 98.885 269 3 0 1909 2177 201367303 201367035 4.200000e-132 481
33 TraesCS2B01G448900 chr3B 96.552 145 4 1 1353 1497 201561290 201561433 2.790000e-59 239
34 TraesCS2B01G448900 chr1B 96.552 145 4 1 1353 1497 633729380 633729523 2.790000e-59 239
35 TraesCS2B01G448900 chr6B 95.862 145 5 1 1353 1497 450081475 450081618 1.300000e-57 233
36 TraesCS2B01G448900 chr6B 95.172 145 6 1 1353 1497 657529951 657530094 6.050000e-56 228


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G448900 chr2B 641858653 641860829 2176 False 4021.0 4021 100.000 1 2177 1 chr2B.!!$F1 2176
1 TraesCS2B01G448900 chr6D 389248773 389254676 5903 True 1924.0 1932 97.971 248 1356 2 chr6D.!!$R2 1108
2 TraesCS2B01G448900 chr5D 503237426 503242782 5356 True 1927.5 1930 98.061 248 1356 2 chr5D.!!$R4 1108
3 TraesCS2B01G448900 chr5D 503227647 503228755 1108 True 1916.0 1916 97.836 248 1356 1 chr5D.!!$R2 1108
4 TraesCS2B01G448900 chr3A 66007625 66008733 1108 False 1927.0 1927 98.016 248 1356 1 chr3A.!!$F1 1108
5 TraesCS2B01G448900 chr7B 663101918 663103025 1107 False 1925.0 1925 98.016 248 1356 1 chr7B.!!$F2 1108
6 TraesCS2B01G448900 chr1D 51916750 51917858 1108 False 1921.0 1921 97.926 248 1356 1 chr1D.!!$F1 1108
7 TraesCS2B01G448900 chr3D 589266016 589267123 1107 False 1919.0 1919 97.926 248 1356 1 chr3D.!!$F1 1108

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
224 225 0.118547 AGGCTACCTAGTTGTGGGGT 59.881 55.0 0.0 0.0 37.16 4.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1976 11021 0.103572 TAAAGCGTATCAGCCGACCC 59.896 55.0 0.0 0.0 38.01 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 7.841915 AACATTTTCCGAAAACATGAAAAGT 57.158 28.000 8.46 0.00 40.23 2.66
81 82 7.841915 ACATTTTCCGAAAACATGAAAAGTT 57.158 28.000 8.46 0.00 40.23 2.66
82 83 8.262715 ACATTTTCCGAAAACATGAAAAGTTT 57.737 26.923 8.46 0.00 40.23 2.66
84 85 9.553418 CATTTTCCGAAAACATGAAAAGTTTTT 57.447 25.926 8.46 0.00 46.01 1.94
208 209 8.183536 AGAAAAATGAACATTTCAAAAACAGGC 58.816 29.630 12.20 0.00 43.95 4.85
209 210 7.628769 AAAATGAACATTTCAAAAACAGGCT 57.371 28.000 12.20 0.00 43.95 4.58
210 211 8.729805 AAAATGAACATTTCAAAAACAGGCTA 57.270 26.923 12.20 0.00 43.95 3.93
211 212 7.713764 AATGAACATTTCAAAAACAGGCTAC 57.286 32.000 0.00 0.00 43.95 3.58
212 213 5.596845 TGAACATTTCAAAAACAGGCTACC 58.403 37.500 0.00 0.00 36.59 3.18
213 214 5.362430 TGAACATTTCAAAAACAGGCTACCT 59.638 36.000 0.00 0.00 36.59 3.08
214 215 6.547880 TGAACATTTCAAAAACAGGCTACCTA 59.452 34.615 0.00 0.00 36.59 3.08
215 216 6.575162 ACATTTCAAAAACAGGCTACCTAG 57.425 37.500 0.00 0.00 29.64 3.02
216 217 6.068670 ACATTTCAAAAACAGGCTACCTAGT 58.931 36.000 0.00 0.00 29.64 2.57
217 218 6.549736 ACATTTCAAAAACAGGCTACCTAGTT 59.450 34.615 0.00 0.00 29.64 2.24
218 219 6.385649 TTTCAAAAACAGGCTACCTAGTTG 57.614 37.500 0.00 0.00 29.97 3.16
219 220 5.043737 TCAAAAACAGGCTACCTAGTTGT 57.956 39.130 0.00 0.00 29.97 3.32
220 221 4.819630 TCAAAAACAGGCTACCTAGTTGTG 59.180 41.667 0.00 0.00 29.97 3.33
221 222 3.418684 AAACAGGCTACCTAGTTGTGG 57.581 47.619 0.00 0.00 29.97 4.17
222 223 1.276622 ACAGGCTACCTAGTTGTGGG 58.723 55.000 0.00 0.00 29.64 4.61
223 224 0.541863 CAGGCTACCTAGTTGTGGGG 59.458 60.000 0.00 0.00 29.64 4.96
224 225 0.118547 AGGCTACCTAGTTGTGGGGT 59.881 55.000 0.00 0.00 37.16 4.95
225 226 1.363629 AGGCTACCTAGTTGTGGGGTA 59.636 52.381 0.00 0.00 34.86 3.69
229 230 1.652947 ACCTAGTTGTGGGGTAGTGG 58.347 55.000 0.00 0.00 0.00 4.00
230 231 0.909623 CCTAGTTGTGGGGTAGTGGG 59.090 60.000 0.00 0.00 0.00 4.61
231 232 0.252197 CTAGTTGTGGGGTAGTGGGC 59.748 60.000 0.00 0.00 0.00 5.36
232 233 0.178885 TAGTTGTGGGGTAGTGGGCT 60.179 55.000 0.00 0.00 0.00 5.19
233 234 1.303317 GTTGTGGGGTAGTGGGCTG 60.303 63.158 0.00 0.00 0.00 4.85
234 235 2.534396 TTGTGGGGTAGTGGGCTGG 61.534 63.158 0.00 0.00 0.00 4.85
235 236 4.426313 GTGGGGTAGTGGGCTGGC 62.426 72.222 0.00 0.00 0.00 4.85
246 247 3.200522 GGCTGGCCCAAATTCTCG 58.799 61.111 0.00 0.00 0.00 4.04
325 326 2.852449 ACAAGCCTCTTATCCATTCCCA 59.148 45.455 0.00 0.00 0.00 4.37
389 390 6.736581 TCACATTGGGTTTAGGGATAATCAA 58.263 36.000 0.00 0.00 0.00 2.57
470 4720 0.753262 CCCGTCCCATCGAGAAAGAT 59.247 55.000 0.00 0.00 0.00 2.40
655 9700 7.312154 GCACATGGTTTCATAAAATCTGTACA 58.688 34.615 0.00 0.00 31.33 2.90
692 9737 1.089920 CGAGCAGGTTTCCATGAAGG 58.910 55.000 0.00 0.00 39.47 3.46
718 9763 6.541641 AGATCTTGTTCAGCATGTTCTATTCC 59.458 38.462 0.00 0.00 37.40 3.01
812 9857 1.302511 GTCGCCCCTTCTTCTTGCA 60.303 57.895 0.00 0.00 0.00 4.08
831 9876 6.267471 TCTTGCACCAAAGATCTTACCATTTT 59.733 34.615 8.75 0.00 31.19 1.82
841 9886 6.472887 AGATCTTACCATTTTCGAAGGAACA 58.527 36.000 8.78 0.00 0.00 3.18
1055 10100 5.855045 ACCGAGACAGAATTTAGAACTTGT 58.145 37.500 0.00 0.00 0.00 3.16
1157 10202 2.568062 TGCATTGCCAGAATCCATGTTT 59.432 40.909 6.12 0.00 0.00 2.83
1239 10284 1.215647 CCTTTCTCCTCGGTCCACG 59.784 63.158 0.00 0.00 46.11 4.94
1298 10343 3.385111 ACGGAAGAAAGAACTCACAGAGT 59.615 43.478 0.00 0.00 45.64 3.24
1377 10422 8.798859 TTCTCTATGATCAGAAAAAGGAAAGG 57.201 34.615 0.09 0.00 0.00 3.11
1378 10423 8.150827 TCTCTATGATCAGAAAAAGGAAAGGA 57.849 34.615 0.09 0.00 0.00 3.36
1379 10424 8.043710 TCTCTATGATCAGAAAAAGGAAAGGAC 58.956 37.037 0.09 0.00 0.00 3.85
1380 10425 7.922382 TCTATGATCAGAAAAAGGAAAGGACT 58.078 34.615 0.09 0.00 0.00 3.85
1381 10426 9.046846 TCTATGATCAGAAAAAGGAAAGGACTA 57.953 33.333 0.09 0.00 0.00 2.59
1382 10427 9.844257 CTATGATCAGAAAAAGGAAAGGACTAT 57.156 33.333 0.09 0.00 0.00 2.12
1384 10429 8.940397 TGATCAGAAAAAGGAAAGGACTATTT 57.060 30.769 0.00 0.00 0.00 1.40
1385 10430 9.367160 TGATCAGAAAAAGGAAAGGACTATTTT 57.633 29.630 0.00 0.00 0.00 1.82
1386 10431 9.631452 GATCAGAAAAAGGAAAGGACTATTTTG 57.369 33.333 0.00 0.00 0.00 2.44
1387 10432 8.533569 TCAGAAAAAGGAAAGGACTATTTTGT 57.466 30.769 0.00 0.00 0.00 2.83
1388 10433 8.977412 TCAGAAAAAGGAAAGGACTATTTTGTT 58.023 29.630 0.00 0.00 0.00 2.83
1389 10434 9.249457 CAGAAAAAGGAAAGGACTATTTTGTTC 57.751 33.333 0.00 0.00 0.00 3.18
1390 10435 8.421784 AGAAAAAGGAAAGGACTATTTTGTTCC 58.578 33.333 0.00 0.00 35.74 3.62
1391 10436 7.914427 AAAAGGAAAGGACTATTTTGTTCCT 57.086 32.000 0.00 0.00 45.25 3.36
1392 10437 9.429109 AAAAAGGAAAGGACTATTTTGTTCCTA 57.571 29.630 3.33 0.00 43.12 2.94
1393 10438 8.637196 AAAGGAAAGGACTATTTTGTTCCTAG 57.363 34.615 3.33 0.00 43.12 3.02
1394 10439 6.181190 AGGAAAGGACTATTTTGTTCCTAGC 58.819 40.000 0.95 0.00 42.33 3.42
1395 10440 5.357314 GGAAAGGACTATTTTGTTCCTAGCC 59.643 44.000 0.00 0.00 33.28 3.93
1396 10441 4.505324 AGGACTATTTTGTTCCTAGCCC 57.495 45.455 0.00 0.00 0.00 5.19
1397 10442 3.202373 AGGACTATTTTGTTCCTAGCCCC 59.798 47.826 0.00 0.00 0.00 5.80
1398 10443 3.202373 GGACTATTTTGTTCCTAGCCCCT 59.798 47.826 0.00 0.00 0.00 4.79
1399 10444 4.200092 GACTATTTTGTTCCTAGCCCCTG 58.800 47.826 0.00 0.00 0.00 4.45
1400 10445 2.532250 ATTTTGTTCCTAGCCCCTGG 57.468 50.000 0.00 0.00 0.00 4.45
1401 10446 0.407918 TTTTGTTCCTAGCCCCTGGG 59.592 55.000 5.50 5.50 33.15 4.45
1411 10456 3.793060 CCCCTGGGGCGTAGATAG 58.207 66.667 21.20 0.00 35.35 2.08
1412 10457 1.155390 CCCCTGGGGCGTAGATAGA 59.845 63.158 21.20 0.00 35.35 1.98
1413 10458 0.471211 CCCCTGGGGCGTAGATAGAA 60.471 60.000 21.20 0.00 35.35 2.10
1414 10459 1.645710 CCCTGGGGCGTAGATAGAAT 58.354 55.000 4.27 0.00 0.00 2.40
1415 10460 1.978580 CCCTGGGGCGTAGATAGAATT 59.021 52.381 4.27 0.00 0.00 2.17
1416 10461 3.170717 CCCTGGGGCGTAGATAGAATTA 58.829 50.000 4.27 0.00 0.00 1.40
1417 10462 3.195825 CCCTGGGGCGTAGATAGAATTAG 59.804 52.174 4.27 0.00 0.00 1.73
1418 10463 4.087182 CCTGGGGCGTAGATAGAATTAGA 58.913 47.826 0.00 0.00 0.00 2.10
1419 10464 4.712337 CCTGGGGCGTAGATAGAATTAGAT 59.288 45.833 0.00 0.00 0.00 1.98
1420 10465 5.892119 CCTGGGGCGTAGATAGAATTAGATA 59.108 44.000 0.00 0.00 0.00 1.98
1421 10466 6.380274 CCTGGGGCGTAGATAGAATTAGATAA 59.620 42.308 0.00 0.00 0.00 1.75
1422 10467 7.093465 CCTGGGGCGTAGATAGAATTAGATAAA 60.093 40.741 0.00 0.00 0.00 1.40
1423 10468 8.197592 TGGGGCGTAGATAGAATTAGATAAAA 57.802 34.615 0.00 0.00 0.00 1.52
1424 10469 8.822805 TGGGGCGTAGATAGAATTAGATAAAAT 58.177 33.333 0.00 0.00 0.00 1.82
1454 10499 7.646548 AGATTTGAAAGGCCTAAATTAGACC 57.353 36.000 5.16 0.00 0.00 3.85
1455 10500 7.182060 AGATTTGAAAGGCCTAAATTAGACCA 58.818 34.615 5.16 0.00 29.63 4.02
1456 10501 7.673926 AGATTTGAAAGGCCTAAATTAGACCAA 59.326 33.333 5.16 0.00 29.63 3.67
1457 10502 7.604657 TTTGAAAGGCCTAAATTAGACCAAA 57.395 32.000 5.16 0.94 29.63 3.28
1458 10503 6.834168 TGAAAGGCCTAAATTAGACCAAAG 57.166 37.500 5.16 0.00 29.63 2.77
1459 10504 6.311735 TGAAAGGCCTAAATTAGACCAAAGT 58.688 36.000 5.16 0.00 29.63 2.66
1460 10505 7.463431 TGAAAGGCCTAAATTAGACCAAAGTA 58.537 34.615 5.16 0.00 29.63 2.24
1461 10506 7.945664 TGAAAGGCCTAAATTAGACCAAAGTAA 59.054 33.333 5.16 0.00 29.63 2.24
1462 10507 8.895141 AAAGGCCTAAATTAGACCAAAGTAAT 57.105 30.769 5.16 0.00 29.63 1.89
1463 10508 8.895141 AAGGCCTAAATTAGACCAAAGTAATT 57.105 30.769 5.16 0.00 29.63 1.40
1464 10509 8.521170 AGGCCTAAATTAGACCAAAGTAATTC 57.479 34.615 1.29 0.00 29.63 2.17
1465 10510 7.560262 AGGCCTAAATTAGACCAAAGTAATTCC 59.440 37.037 1.29 0.00 29.63 3.01
1466 10511 7.415229 GCCTAAATTAGACCAAAGTAATTCCG 58.585 38.462 0.83 0.00 30.22 4.30
1467 10512 7.066645 GCCTAAATTAGACCAAAGTAATTCCGT 59.933 37.037 0.83 0.00 30.22 4.69
1468 10513 8.610035 CCTAAATTAGACCAAAGTAATTCCGTC 58.390 37.037 0.83 0.00 30.22 4.79
1469 10514 9.379791 CTAAATTAGACCAAAGTAATTCCGTCT 57.620 33.333 9.09 9.09 33.98 4.18
1470 10515 7.611213 AATTAGACCAAAGTAATTCCGTCTG 57.389 36.000 12.55 0.00 32.52 3.51
1471 10516 3.335579 AGACCAAAGTAATTCCGTCTGC 58.664 45.455 4.58 0.00 30.21 4.26
1472 10517 3.008049 AGACCAAAGTAATTCCGTCTGCT 59.992 43.478 4.58 0.00 30.21 4.24
1473 10518 4.222145 AGACCAAAGTAATTCCGTCTGCTA 59.778 41.667 4.58 0.00 30.21 3.49
1474 10519 4.504858 ACCAAAGTAATTCCGTCTGCTAG 58.495 43.478 0.00 0.00 0.00 3.42
1475 10520 4.222145 ACCAAAGTAATTCCGTCTGCTAGA 59.778 41.667 0.00 0.00 0.00 2.43
1476 10521 5.175859 CCAAAGTAATTCCGTCTGCTAGAA 58.824 41.667 0.00 0.00 0.00 2.10
1477 10522 5.817816 CCAAAGTAATTCCGTCTGCTAGAAT 59.182 40.000 0.00 0.00 0.00 2.40
1478 10523 6.984474 CCAAAGTAATTCCGTCTGCTAGAATA 59.016 38.462 0.00 0.00 30.21 1.75
1479 10524 7.494625 CCAAAGTAATTCCGTCTGCTAGAATAA 59.505 37.037 0.00 0.00 30.21 1.40
1480 10525 8.543774 CAAAGTAATTCCGTCTGCTAGAATAAG 58.456 37.037 0.00 0.00 30.21 1.73
1481 10526 7.584122 AGTAATTCCGTCTGCTAGAATAAGA 57.416 36.000 0.00 0.00 30.21 2.10
1482 10527 8.008513 AGTAATTCCGTCTGCTAGAATAAGAA 57.991 34.615 0.00 0.00 30.21 2.52
1483 10528 8.475639 AGTAATTCCGTCTGCTAGAATAAGAAA 58.524 33.333 0.00 0.00 30.21 2.52
1484 10529 9.095065 GTAATTCCGTCTGCTAGAATAAGAAAA 57.905 33.333 0.00 0.00 30.21 2.29
1485 10530 8.561738 AATTCCGTCTGCTAGAATAAGAAAAA 57.438 30.769 0.00 0.00 30.21 1.94
1486 10531 7.596749 TTCCGTCTGCTAGAATAAGAAAAAG 57.403 36.000 0.00 0.00 0.00 2.27
1487 10532 5.581085 TCCGTCTGCTAGAATAAGAAAAAGC 59.419 40.000 0.00 0.00 0.00 3.51
1488 10533 5.484958 CGTCTGCTAGAATAAGAAAAAGCG 58.515 41.667 0.00 0.00 32.67 4.68
1489 10534 5.259380 GTCTGCTAGAATAAGAAAAAGCGC 58.741 41.667 0.00 0.00 32.67 5.92
1490 10535 5.064071 GTCTGCTAGAATAAGAAAAAGCGCT 59.936 40.000 2.64 2.64 32.67 5.92
1491 10536 5.643777 TCTGCTAGAATAAGAAAAAGCGCTT 59.356 36.000 18.98 18.98 32.67 4.68
1492 10537 6.149474 TCTGCTAGAATAAGAAAAAGCGCTTT 59.851 34.615 29.11 29.11 32.67 3.51
1493 10538 6.314784 TGCTAGAATAAGAAAAAGCGCTTTC 58.685 36.000 33.69 23.05 35.85 2.62
1494 10539 5.739630 GCTAGAATAAGAAAAAGCGCTTTCC 59.260 40.000 33.69 26.35 36.18 3.13
1495 10540 4.723248 AGAATAAGAAAAAGCGCTTTCCG 58.277 39.130 33.69 0.00 36.18 4.30
1496 10541 4.454504 AGAATAAGAAAAAGCGCTTTCCGA 59.545 37.500 33.69 20.60 40.02 4.55
1497 10542 4.965119 ATAAGAAAAAGCGCTTTCCGAT 57.035 36.364 33.69 22.04 40.02 4.18
1499 10544 3.203161 AGAAAAAGCGCTTTCCGATTC 57.797 42.857 33.69 29.46 46.01 2.52
1500 10545 2.552315 AGAAAAAGCGCTTTCCGATTCA 59.448 40.909 33.69 0.00 46.01 2.57
1501 10546 2.331809 AAAAGCGCTTTCCGATTCAC 57.668 45.000 33.69 0.00 46.01 3.18
1502 10547 0.521735 AAAGCGCTTTCCGATTCACC 59.478 50.000 29.11 0.00 46.01 4.02
1503 10548 0.605319 AAGCGCTTTCCGATTCACCA 60.605 50.000 18.98 0.00 42.72 4.17
1504 10549 0.605319 AGCGCTTTCCGATTCACCAA 60.605 50.000 2.64 0.00 40.02 3.67
1505 10550 0.239879 GCGCTTTCCGATTCACCAAA 59.760 50.000 0.00 0.00 40.02 3.28
1506 10551 1.963747 CGCTTTCCGATTCACCAAAC 58.036 50.000 0.00 0.00 40.02 2.93
1507 10552 1.401018 CGCTTTCCGATTCACCAAACC 60.401 52.381 0.00 0.00 40.02 3.27
1508 10553 1.611491 GCTTTCCGATTCACCAAACCA 59.389 47.619 0.00 0.00 0.00 3.67
1509 10554 2.035321 GCTTTCCGATTCACCAAACCAA 59.965 45.455 0.00 0.00 0.00 3.67
1510 10555 3.306019 GCTTTCCGATTCACCAAACCAAT 60.306 43.478 0.00 0.00 0.00 3.16
1511 10556 4.799255 GCTTTCCGATTCACCAAACCAATT 60.799 41.667 0.00 0.00 0.00 2.32
1512 10557 4.513198 TTCCGATTCACCAAACCAATTC 57.487 40.909 0.00 0.00 0.00 2.17
1513 10558 3.761897 TCCGATTCACCAAACCAATTCT 58.238 40.909 0.00 0.00 0.00 2.40
1514 10559 4.148838 TCCGATTCACCAAACCAATTCTT 58.851 39.130 0.00 0.00 0.00 2.52
1515 10560 5.317808 TCCGATTCACCAAACCAATTCTTA 58.682 37.500 0.00 0.00 0.00 2.10
1516 10561 5.949354 TCCGATTCACCAAACCAATTCTTAT 59.051 36.000 0.00 0.00 0.00 1.73
1517 10562 6.094881 TCCGATTCACCAAACCAATTCTTATC 59.905 38.462 0.00 0.00 0.00 1.75
1518 10563 6.095440 CCGATTCACCAAACCAATTCTTATCT 59.905 38.462 0.00 0.00 0.00 1.98
1519 10564 7.189512 CGATTCACCAAACCAATTCTTATCTC 58.810 38.462 0.00 0.00 0.00 2.75
1520 10565 7.066284 CGATTCACCAAACCAATTCTTATCTCT 59.934 37.037 0.00 0.00 0.00 3.10
1521 10566 8.655935 ATTCACCAAACCAATTCTTATCTCTT 57.344 30.769 0.00 0.00 0.00 2.85
1522 10567 8.477419 TTCACCAAACCAATTCTTATCTCTTT 57.523 30.769 0.00 0.00 0.00 2.52
1523 10568 8.110860 TCACCAAACCAATTCTTATCTCTTTC 57.889 34.615 0.00 0.00 0.00 2.62
1524 10569 7.944554 TCACCAAACCAATTCTTATCTCTTTCT 59.055 33.333 0.00 0.00 0.00 2.52
1525 10570 8.025445 CACCAAACCAATTCTTATCTCTTTCTG 58.975 37.037 0.00 0.00 0.00 3.02
1526 10571 7.944554 ACCAAACCAATTCTTATCTCTTTCTGA 59.055 33.333 0.00 0.00 0.00 3.27
1527 10572 8.796475 CCAAACCAATTCTTATCTCTTTCTGAA 58.204 33.333 0.00 0.00 0.00 3.02
1530 10575 9.799106 AACCAATTCTTATCTCTTTCTGAAAGA 57.201 29.630 26.29 26.29 44.82 2.52
1634 10679 8.485578 AGAATGGGTTTAGTTGGTTAAATTCA 57.514 30.769 0.00 0.00 0.00 2.57
1635 10680 8.929487 AGAATGGGTTTAGTTGGTTAAATTCAA 58.071 29.630 0.00 0.00 0.00 2.69
1636 10681 9.549078 GAATGGGTTTAGTTGGTTAAATTCAAA 57.451 29.630 0.00 0.00 0.00 2.69
1637 10682 9.907229 AATGGGTTTAGTTGGTTAAATTCAAAA 57.093 25.926 0.00 0.00 0.00 2.44
1638 10683 9.907229 ATGGGTTTAGTTGGTTAAATTCAAAAA 57.093 25.926 0.00 0.00 0.00 1.94
1639 10684 9.384764 TGGGTTTAGTTGGTTAAATTCAAAAAG 57.615 29.630 0.00 0.00 0.00 2.27
1640 10685 9.386010 GGGTTTAGTTGGTTAAATTCAAAAAGT 57.614 29.630 0.00 0.00 0.00 2.66
1661 10706 9.783256 AAAAGTTAATAAAATAACTAGGCAGCG 57.217 29.630 0.00 0.00 43.52 5.18
1662 10707 8.726870 AAGTTAATAAAATAACTAGGCAGCGA 57.273 30.769 0.00 0.00 43.52 4.93
1663 10708 8.726870 AGTTAATAAAATAACTAGGCAGCGAA 57.273 30.769 0.00 0.00 42.73 4.70
1664 10709 8.827677 AGTTAATAAAATAACTAGGCAGCGAAG 58.172 33.333 0.00 0.00 42.73 3.79
1665 10710 8.610035 GTTAATAAAATAACTAGGCAGCGAAGT 58.390 33.333 0.00 0.00 33.84 3.01
1666 10711 7.625828 AATAAAATAACTAGGCAGCGAAGTT 57.374 32.000 13.74 13.74 37.27 2.66
1667 10712 8.726870 AATAAAATAACTAGGCAGCGAAGTTA 57.273 30.769 16.44 16.44 39.36 2.24
1668 10713 8.904099 ATAAAATAACTAGGCAGCGAAGTTAT 57.096 30.769 18.64 18.64 44.38 1.89
1671 10716 7.625828 AATAACTAGGCAGCGAAGTTATTTT 57.374 32.000 24.62 13.73 46.57 1.82
1672 10717 8.726870 AATAACTAGGCAGCGAAGTTATTTTA 57.273 30.769 24.62 8.32 46.57 1.52
1673 10718 8.904099 ATAACTAGGCAGCGAAGTTATTTTAT 57.096 30.769 18.64 5.52 41.41 1.40
1674 10719 7.625828 AACTAGGCAGCGAAGTTATTTTATT 57.374 32.000 8.81 0.00 31.84 1.40
1675 10720 8.726870 AACTAGGCAGCGAAGTTATTTTATTA 57.273 30.769 8.81 0.00 31.84 0.98
1676 10721 8.139521 ACTAGGCAGCGAAGTTATTTTATTAC 57.860 34.615 0.00 0.00 0.00 1.89
1677 10722 6.373186 AGGCAGCGAAGTTATTTTATTACC 57.627 37.500 0.00 0.00 0.00 2.85
1678 10723 6.120220 AGGCAGCGAAGTTATTTTATTACCT 58.880 36.000 0.00 0.00 0.00 3.08
1679 10724 7.277396 AGGCAGCGAAGTTATTTTATTACCTA 58.723 34.615 0.00 0.00 0.00 3.08
1680 10725 7.771826 AGGCAGCGAAGTTATTTTATTACCTAA 59.228 33.333 0.00 0.00 0.00 2.69
1681 10726 8.400186 GGCAGCGAAGTTATTTTATTACCTAAA 58.600 33.333 0.00 0.00 0.00 1.85
1682 10727 9.946165 GCAGCGAAGTTATTTTATTACCTAAAT 57.054 29.630 0.00 0.00 0.00 1.40
1777 10822 9.651913 TTTCTTTAAAACAAAGATGAAACAGCT 57.348 25.926 0.62 0.00 36.30 4.24
1778 10823 8.856490 TCTTTAAAACAAAGATGAAACAGCTC 57.144 30.769 0.00 0.00 31.86 4.09
1779 10824 8.686334 TCTTTAAAACAAAGATGAAACAGCTCT 58.314 29.630 0.00 0.00 31.86 4.09
1780 10825 8.856490 TTTAAAACAAAGATGAAACAGCTCTC 57.144 30.769 0.00 0.00 0.00 3.20
1781 10826 6.705863 AAAACAAAGATGAAACAGCTCTCT 57.294 33.333 0.00 0.00 0.00 3.10
1782 10827 6.705863 AAACAAAGATGAAACAGCTCTCTT 57.294 33.333 0.00 0.00 0.00 2.85
1783 10828 5.686159 ACAAAGATGAAACAGCTCTCTTG 57.314 39.130 0.00 0.00 0.00 3.02
1784 10829 5.371526 ACAAAGATGAAACAGCTCTCTTGA 58.628 37.500 0.00 0.00 0.00 3.02
1785 10830 6.002704 ACAAAGATGAAACAGCTCTCTTGAT 58.997 36.000 0.00 0.00 0.00 2.57
1786 10831 6.149142 ACAAAGATGAAACAGCTCTCTTGATC 59.851 38.462 0.00 0.00 0.00 2.92
1787 10832 4.768583 AGATGAAACAGCTCTCTTGATCC 58.231 43.478 0.00 0.00 0.00 3.36
1788 10833 4.224594 AGATGAAACAGCTCTCTTGATCCA 59.775 41.667 0.00 0.00 0.00 3.41
1789 10834 3.935315 TGAAACAGCTCTCTTGATCCAG 58.065 45.455 0.00 0.00 0.00 3.86
1790 10835 3.326006 TGAAACAGCTCTCTTGATCCAGT 59.674 43.478 0.00 0.00 0.00 4.00
1791 10836 4.202398 TGAAACAGCTCTCTTGATCCAGTT 60.202 41.667 0.00 0.00 0.00 3.16
1792 10837 3.608316 ACAGCTCTCTTGATCCAGTTC 57.392 47.619 0.00 0.00 0.00 3.01
1793 10838 2.235898 ACAGCTCTCTTGATCCAGTTCC 59.764 50.000 0.00 0.00 0.00 3.62
1794 10839 2.235650 CAGCTCTCTTGATCCAGTTCCA 59.764 50.000 0.00 0.00 0.00 3.53
1795 10840 3.113824 AGCTCTCTTGATCCAGTTCCAT 58.886 45.455 0.00 0.00 0.00 3.41
1796 10841 4.100653 CAGCTCTCTTGATCCAGTTCCATA 59.899 45.833 0.00 0.00 0.00 2.74
1797 10842 4.718774 AGCTCTCTTGATCCAGTTCCATAA 59.281 41.667 0.00 0.00 0.00 1.90
1798 10843 5.369110 AGCTCTCTTGATCCAGTTCCATAAT 59.631 40.000 0.00 0.00 0.00 1.28
1799 10844 6.060788 GCTCTCTTGATCCAGTTCCATAATT 58.939 40.000 0.00 0.00 0.00 1.40
1800 10845 7.071698 AGCTCTCTTGATCCAGTTCCATAATTA 59.928 37.037 0.00 0.00 0.00 1.40
1801 10846 7.716998 GCTCTCTTGATCCAGTTCCATAATTAA 59.283 37.037 0.00 0.00 0.00 1.40
1802 10847 8.964476 TCTCTTGATCCAGTTCCATAATTAAC 57.036 34.615 0.00 0.00 0.00 2.01
1803 10848 8.772250 TCTCTTGATCCAGTTCCATAATTAACT 58.228 33.333 0.00 0.00 36.38 2.24
1814 10859 9.739276 AGTTCCATAATTAACTGATTGAGTGAA 57.261 29.630 0.00 0.00 34.70 3.18
1818 10863 9.956720 CCATAATTAACTGATTGAGTGAATTCC 57.043 33.333 2.23 0.00 40.55 3.01
1822 10867 9.865321 AATTAACTGATTGAGTGAATTCCAATG 57.135 29.630 11.64 3.60 40.55 2.82
1823 10868 8.634335 TTAACTGATTGAGTGAATTCCAATGA 57.366 30.769 11.64 4.63 34.02 2.57
1824 10869 7.528996 AACTGATTGAGTGAATTCCAATGAA 57.471 32.000 11.64 0.00 34.02 2.57
1825 10870 7.528996 ACTGATTGAGTGAATTCCAATGAAA 57.471 32.000 11.64 0.00 30.93 2.69
1826 10871 7.954835 ACTGATTGAGTGAATTCCAATGAAAA 58.045 30.769 11.64 0.00 30.93 2.29
1827 10872 7.869429 ACTGATTGAGTGAATTCCAATGAAAAC 59.131 33.333 11.64 0.00 30.93 2.43
1828 10873 7.153985 TGATTGAGTGAATTCCAATGAAAACC 58.846 34.615 11.64 0.49 33.32 3.27
1829 10874 6.729690 TTGAGTGAATTCCAATGAAAACCT 57.270 33.333 2.27 0.00 33.32 3.50
1830 10875 7.831691 TTGAGTGAATTCCAATGAAAACCTA 57.168 32.000 2.27 0.00 33.32 3.08
1831 10876 8.421249 TTGAGTGAATTCCAATGAAAACCTAT 57.579 30.769 2.27 0.00 33.32 2.57
1832 10877 7.829725 TGAGTGAATTCCAATGAAAACCTATG 58.170 34.615 2.27 0.00 33.32 2.23
1833 10878 7.451255 TGAGTGAATTCCAATGAAAACCTATGT 59.549 33.333 2.27 0.00 33.32 2.29
1834 10879 8.193953 AGTGAATTCCAATGAAAACCTATGTT 57.806 30.769 2.27 0.00 33.32 2.71
1835 10880 8.650490 AGTGAATTCCAATGAAAACCTATGTTT 58.350 29.630 2.27 0.00 46.50 2.83
1836 10881 9.921637 GTGAATTCCAATGAAAACCTATGTTTA 57.078 29.630 2.27 0.00 43.80 2.01
1922 10967 8.521170 ACCTAAGTTTTAGAATAGCAATTCCC 57.479 34.615 0.00 0.00 42.20 3.97
1923 10968 8.113462 ACCTAAGTTTTAGAATAGCAATTCCCA 58.887 33.333 0.00 0.00 42.20 4.37
1924 10969 9.136323 CCTAAGTTTTAGAATAGCAATTCCCAT 57.864 33.333 0.00 0.00 42.20 4.00
1927 10972 8.011844 AGTTTTAGAATAGCAATTCCCATTCC 57.988 34.615 0.00 0.00 42.20 3.01
1928 10973 7.619302 AGTTTTAGAATAGCAATTCCCATTCCA 59.381 33.333 0.00 0.00 42.20 3.53
1929 10974 6.959639 TTAGAATAGCAATTCCCATTCCAC 57.040 37.500 0.00 0.00 42.20 4.02
1930 10975 4.218312 AGAATAGCAATTCCCATTCCACC 58.782 43.478 0.00 0.00 42.20 4.61
1931 10976 2.452600 TAGCAATTCCCATTCCACCC 57.547 50.000 0.00 0.00 0.00 4.61
1932 10977 0.413037 AGCAATTCCCATTCCACCCA 59.587 50.000 0.00 0.00 0.00 4.51
1933 10978 1.203288 AGCAATTCCCATTCCACCCAA 60.203 47.619 0.00 0.00 0.00 4.12
1934 10979 1.627834 GCAATTCCCATTCCACCCAAA 59.372 47.619 0.00 0.00 0.00 3.28
1935 10980 2.039613 GCAATTCCCATTCCACCCAAAA 59.960 45.455 0.00 0.00 0.00 2.44
1936 10981 3.673902 CAATTCCCATTCCACCCAAAAC 58.326 45.455 0.00 0.00 0.00 2.43
1937 10982 2.785357 TTCCCATTCCACCCAAAACT 57.215 45.000 0.00 0.00 0.00 2.66
1938 10983 2.785357 TCCCATTCCACCCAAAACTT 57.215 45.000 0.00 0.00 0.00 2.66
1939 10984 3.053359 TCCCATTCCACCCAAAACTTT 57.947 42.857 0.00 0.00 0.00 2.66
1940 10985 4.200447 TCCCATTCCACCCAAAACTTTA 57.800 40.909 0.00 0.00 0.00 1.85
1941 10986 4.156477 TCCCATTCCACCCAAAACTTTAG 58.844 43.478 0.00 0.00 0.00 1.85
1942 10987 3.260632 CCCATTCCACCCAAAACTTTAGG 59.739 47.826 0.00 0.00 0.00 2.69
1943 10988 4.156477 CCATTCCACCCAAAACTTTAGGA 58.844 43.478 0.00 0.00 0.00 2.94
1944 10989 4.591072 CCATTCCACCCAAAACTTTAGGAA 59.409 41.667 0.00 0.00 37.98 3.36
1945 10990 5.248248 CCATTCCACCCAAAACTTTAGGAAT 59.752 40.000 0.00 0.00 43.16 3.01
1946 10991 6.239858 CCATTCCACCCAAAACTTTAGGAATT 60.240 38.462 0.00 0.00 41.14 2.17
1947 10992 6.413783 TTCCACCCAAAACTTTAGGAATTC 57.586 37.500 0.00 0.00 0.00 2.17
1948 10993 4.836175 TCCACCCAAAACTTTAGGAATTCC 59.164 41.667 17.31 17.31 0.00 3.01
1950 10995 5.306937 CCACCCAAAACTTTAGGAATTCCTT 59.693 40.000 31.45 15.78 46.09 3.36
1951 10996 6.223120 CACCCAAAACTTTAGGAATTCCTTG 58.777 40.000 31.45 20.37 46.09 3.61
1952 10997 6.041523 CACCCAAAACTTTAGGAATTCCTTGA 59.958 38.462 31.45 17.85 46.09 3.02
1953 10998 6.787458 ACCCAAAACTTTAGGAATTCCTTGAT 59.213 34.615 31.45 14.06 46.09 2.57
1954 10999 7.953493 ACCCAAAACTTTAGGAATTCCTTGATA 59.047 33.333 31.45 11.54 46.09 2.15
1955 11000 8.470002 CCCAAAACTTTAGGAATTCCTTGATAG 58.530 37.037 31.45 22.50 46.09 2.08
1956 11001 9.025041 CCAAAACTTTAGGAATTCCTTGATAGT 57.975 33.333 31.45 23.06 46.09 2.12
1959 11004 8.581253 AACTTTAGGAATTCCTTGATAGTTGG 57.419 34.615 31.45 13.46 46.09 3.77
1960 11005 7.699878 ACTTTAGGAATTCCTTGATAGTTGGT 58.300 34.615 31.45 14.00 46.09 3.67
1961 11006 8.832735 ACTTTAGGAATTCCTTGATAGTTGGTA 58.167 33.333 31.45 6.70 46.09 3.25
1962 11007 9.853177 CTTTAGGAATTCCTTGATAGTTGGTAT 57.147 33.333 31.45 5.36 46.09 2.73
1970 11015 9.847224 ATTCCTTGATAGTTGGTATAAATTCGT 57.153 29.630 0.00 0.00 0.00 3.85
1975 11020 8.597662 TGATAGTTGGTATAAATTCGTAAGCC 57.402 34.615 0.00 0.00 37.18 4.35
1976 11021 5.978934 AGTTGGTATAAATTCGTAAGCCG 57.021 39.130 0.00 0.00 38.13 5.52
1977 11022 4.812626 AGTTGGTATAAATTCGTAAGCCGG 59.187 41.667 0.00 0.00 37.11 6.13
1978 11023 3.731089 TGGTATAAATTCGTAAGCCGGG 58.269 45.455 2.18 0.00 37.11 5.73
1979 11024 3.134442 TGGTATAAATTCGTAAGCCGGGT 59.866 43.478 0.00 0.00 37.11 5.28
1980 11025 3.742882 GGTATAAATTCGTAAGCCGGGTC 59.257 47.826 6.62 0.00 37.11 4.46
1981 11026 1.925229 TAAATTCGTAAGCCGGGTCG 58.075 50.000 6.62 7.65 37.11 4.79
1991 11036 4.944372 CCGGGTCGGCTGATACGC 62.944 72.222 14.22 4.22 41.17 4.42
1992 11037 3.900892 CGGGTCGGCTGATACGCT 61.901 66.667 0.00 0.00 0.00 5.07
1993 11038 2.499685 GGGTCGGCTGATACGCTT 59.500 61.111 0.00 0.00 0.00 4.68
1994 11039 1.153429 GGGTCGGCTGATACGCTTT 60.153 57.895 0.00 0.00 0.00 3.51
1995 11040 0.103572 GGGTCGGCTGATACGCTTTA 59.896 55.000 0.00 0.00 0.00 1.85
1996 11041 1.472026 GGGTCGGCTGATACGCTTTAA 60.472 52.381 0.00 0.00 0.00 1.52
1997 11042 2.273557 GGTCGGCTGATACGCTTTAAA 58.726 47.619 0.00 0.00 0.00 1.52
1998 11043 2.674357 GGTCGGCTGATACGCTTTAAAA 59.326 45.455 0.00 0.00 0.00 1.52
1999 11044 3.125658 GGTCGGCTGATACGCTTTAAAAA 59.874 43.478 0.00 0.00 0.00 1.94
2000 11045 4.331962 GTCGGCTGATACGCTTTAAAAAG 58.668 43.478 0.00 0.00 39.03 2.27
2001 11046 3.372822 TCGGCTGATACGCTTTAAAAAGG 59.627 43.478 4.71 0.00 36.53 3.11
2002 11047 3.126343 CGGCTGATACGCTTTAAAAAGGT 59.874 43.478 4.71 3.89 36.53 3.50
2003 11048 4.379082 CGGCTGATACGCTTTAAAAAGGTT 60.379 41.667 4.71 0.00 36.53 3.50
2004 11049 5.093457 GGCTGATACGCTTTAAAAAGGTTC 58.907 41.667 4.71 3.52 36.53 3.62
2005 11050 5.106277 GGCTGATACGCTTTAAAAAGGTTCT 60.106 40.000 4.71 0.00 36.53 3.01
2006 11051 6.379386 GCTGATACGCTTTAAAAAGGTTCTT 58.621 36.000 4.71 0.00 36.53 2.52
2007 11052 6.305638 GCTGATACGCTTTAAAAAGGTTCTTG 59.694 38.462 4.71 0.00 36.53 3.02
2008 11053 7.266922 TGATACGCTTTAAAAAGGTTCTTGT 57.733 32.000 4.71 0.00 36.53 3.16
2009 11054 7.708998 TGATACGCTTTAAAAAGGTTCTTGTT 58.291 30.769 4.71 0.00 36.53 2.83
2010 11055 7.858879 TGATACGCTTTAAAAAGGTTCTTGTTC 59.141 33.333 4.71 0.00 36.53 3.18
2011 11056 6.203808 ACGCTTTAAAAAGGTTCTTGTTCT 57.796 33.333 4.71 0.00 36.53 3.01
2012 11057 7.324354 ACGCTTTAAAAAGGTTCTTGTTCTA 57.676 32.000 4.71 0.00 36.53 2.10
2013 11058 7.937649 ACGCTTTAAAAAGGTTCTTGTTCTAT 58.062 30.769 4.71 0.00 36.53 1.98
2014 11059 9.059260 ACGCTTTAAAAAGGTTCTTGTTCTATA 57.941 29.630 4.71 0.00 36.53 1.31
2042 11087 9.853177 ATTCCTTTTCTAGTCTTTCTCTTTTGA 57.147 29.630 0.00 0.00 0.00 2.69
2043 11088 9.853177 TTCCTTTTCTAGTCTTTCTCTTTTGAT 57.147 29.630 0.00 0.00 0.00 2.57
2044 11089 9.277783 TCCTTTTCTAGTCTTTCTCTTTTGATG 57.722 33.333 0.00 0.00 0.00 3.07
2045 11090 9.061435 CCTTTTCTAGTCTTTCTCTTTTGATGT 57.939 33.333 0.00 0.00 0.00 3.06
2047 11092 7.875316 TTCTAGTCTTTCTCTTTTGATGTCG 57.125 36.000 0.00 0.00 0.00 4.35
2048 11093 4.999751 AGTCTTTCTCTTTTGATGTCGC 57.000 40.909 0.00 0.00 0.00 5.19
2049 11094 4.380531 AGTCTTTCTCTTTTGATGTCGCA 58.619 39.130 0.00 0.00 0.00 5.10
2050 11095 4.816385 AGTCTTTCTCTTTTGATGTCGCAA 59.184 37.500 0.00 0.00 0.00 4.85
2051 11096 5.296780 AGTCTTTCTCTTTTGATGTCGCAAA 59.703 36.000 0.00 0.00 36.08 3.68
2052 11097 5.622856 GTCTTTCTCTTTTGATGTCGCAAAG 59.377 40.000 0.00 0.00 38.80 2.77
2053 11098 5.296780 TCTTTCTCTTTTGATGTCGCAAAGT 59.703 36.000 0.00 0.00 38.80 2.66
2054 11099 5.499139 TTCTCTTTTGATGTCGCAAAGTT 57.501 34.783 0.00 0.00 38.80 2.66
2055 11100 4.847633 TCTCTTTTGATGTCGCAAAGTTG 58.152 39.130 0.00 0.00 38.80 3.16
2056 11101 4.574421 TCTCTTTTGATGTCGCAAAGTTGA 59.426 37.500 0.00 0.00 38.80 3.18
2057 11102 5.065859 TCTCTTTTGATGTCGCAAAGTTGAA 59.934 36.000 0.00 0.00 38.80 2.69
2058 11103 5.645624 TCTTTTGATGTCGCAAAGTTGAAA 58.354 33.333 0.00 0.00 38.80 2.69
2059 11104 5.514914 TCTTTTGATGTCGCAAAGTTGAAAC 59.485 36.000 0.00 0.00 38.80 2.78
2060 11105 3.347958 TGATGTCGCAAAGTTGAAACC 57.652 42.857 0.00 0.00 0.00 3.27
2061 11106 2.685388 TGATGTCGCAAAGTTGAAACCA 59.315 40.909 0.00 0.00 0.00 3.67
2062 11107 3.129462 TGATGTCGCAAAGTTGAAACCAA 59.871 39.130 0.00 0.00 0.00 3.67
2063 11108 3.143807 TGTCGCAAAGTTGAAACCAAG 57.856 42.857 0.00 0.00 0.00 3.61
2064 11109 2.750166 TGTCGCAAAGTTGAAACCAAGA 59.250 40.909 0.00 0.00 0.00 3.02
2065 11110 3.191581 TGTCGCAAAGTTGAAACCAAGAA 59.808 39.130 0.00 0.00 0.00 2.52
2066 11111 4.170256 GTCGCAAAGTTGAAACCAAGAAA 58.830 39.130 0.00 0.00 0.00 2.52
2067 11112 4.803613 GTCGCAAAGTTGAAACCAAGAAAT 59.196 37.500 0.00 0.00 0.00 2.17
2068 11113 5.974751 GTCGCAAAGTTGAAACCAAGAAATA 59.025 36.000 0.00 0.00 0.00 1.40
2069 11114 6.640907 GTCGCAAAGTTGAAACCAAGAAATAT 59.359 34.615 0.00 0.00 0.00 1.28
2070 11115 6.861055 TCGCAAAGTTGAAACCAAGAAATATC 59.139 34.615 0.00 0.00 0.00 1.63
2071 11116 6.863126 CGCAAAGTTGAAACCAAGAAATATCT 59.137 34.615 0.00 0.00 37.57 1.98
2072 11117 7.148918 CGCAAAGTTGAAACCAAGAAATATCTG 60.149 37.037 0.00 0.00 35.59 2.90
2073 11118 7.653311 GCAAAGTTGAAACCAAGAAATATCTGT 59.347 33.333 0.00 0.00 35.59 3.41
2074 11119 9.533253 CAAAGTTGAAACCAAGAAATATCTGTT 57.467 29.630 0.00 0.00 35.59 3.16
2081 11126 9.788960 GAAACCAAGAAATATCTGTTATGTTCC 57.211 33.333 0.00 0.00 35.59 3.62
2082 11127 9.533831 AAACCAAGAAATATCTGTTATGTTCCT 57.466 29.630 0.00 0.00 35.59 3.36
2083 11128 8.511604 ACCAAGAAATATCTGTTATGTTCCTG 57.488 34.615 0.00 0.00 35.59 3.86
2084 11129 8.328758 ACCAAGAAATATCTGTTATGTTCCTGA 58.671 33.333 0.00 0.00 35.59 3.86
2085 11130 9.347240 CCAAGAAATATCTGTTATGTTCCTGAT 57.653 33.333 0.00 0.00 35.59 2.90
2087 11132 9.911788 AAGAAATATCTGTTATGTTCCTGATGT 57.088 29.630 0.00 0.00 35.59 3.06
2088 11133 9.911788 AGAAATATCTGTTATGTTCCTGATGTT 57.088 29.630 0.00 0.00 33.59 2.71
2091 11136 8.682936 ATATCTGTTATGTTCCTGATGTTTCC 57.317 34.615 0.00 0.00 0.00 3.13
2092 11137 4.935205 TCTGTTATGTTCCTGATGTTTCCG 59.065 41.667 0.00 0.00 0.00 4.30
2093 11138 4.900684 TGTTATGTTCCTGATGTTTCCGA 58.099 39.130 0.00 0.00 0.00 4.55
2094 11139 5.309638 TGTTATGTTCCTGATGTTTCCGAA 58.690 37.500 0.00 0.00 0.00 4.30
2095 11140 5.180492 TGTTATGTTCCTGATGTTTCCGAAC 59.820 40.000 0.00 0.00 33.72 3.95
2109 11154 7.743520 TGTTTCCGAACACTTTCAATAAAAC 57.256 32.000 0.00 0.00 40.71 2.43
2110 11155 6.752815 TGTTTCCGAACACTTTCAATAAAACC 59.247 34.615 0.00 0.00 40.71 3.27
2111 11156 5.441709 TCCGAACACTTTCAATAAAACCC 57.558 39.130 0.00 0.00 0.00 4.11
2112 11157 5.134661 TCCGAACACTTTCAATAAAACCCT 58.865 37.500 0.00 0.00 0.00 4.34
2113 11158 5.239963 TCCGAACACTTTCAATAAAACCCTC 59.760 40.000 0.00 0.00 0.00 4.30
2114 11159 5.240844 CCGAACACTTTCAATAAAACCCTCT 59.759 40.000 0.00 0.00 0.00 3.69
2115 11160 6.371389 CGAACACTTTCAATAAAACCCTCTC 58.629 40.000 0.00 0.00 0.00 3.20
2116 11161 5.941948 ACACTTTCAATAAAACCCTCTCG 57.058 39.130 0.00 0.00 0.00 4.04
2117 11162 5.374071 ACACTTTCAATAAAACCCTCTCGT 58.626 37.500 0.00 0.00 0.00 4.18
2118 11163 6.527423 ACACTTTCAATAAAACCCTCTCGTA 58.473 36.000 0.00 0.00 0.00 3.43
2119 11164 6.649557 ACACTTTCAATAAAACCCTCTCGTAG 59.350 38.462 0.00 0.00 0.00 3.51
2120 11165 6.872020 CACTTTCAATAAAACCCTCTCGTAGA 59.128 38.462 0.00 0.00 0.00 2.59
2121 11166 7.386848 CACTTTCAATAAAACCCTCTCGTAGAA 59.613 37.037 0.00 0.00 34.09 2.10
2122 11167 7.603024 ACTTTCAATAAAACCCTCTCGTAGAAG 59.397 37.037 0.00 0.00 34.09 2.85
2123 11168 6.600882 TCAATAAAACCCTCTCGTAGAAGT 57.399 37.500 0.00 0.00 34.09 3.01
2124 11169 7.707624 TCAATAAAACCCTCTCGTAGAAGTA 57.292 36.000 0.00 0.00 34.09 2.24
2125 11170 8.302515 TCAATAAAACCCTCTCGTAGAAGTAT 57.697 34.615 0.00 0.00 34.09 2.12
2126 11171 8.755977 TCAATAAAACCCTCTCGTAGAAGTATT 58.244 33.333 0.00 0.00 34.09 1.89
2127 11172 9.379791 CAATAAAACCCTCTCGTAGAAGTATTT 57.620 33.333 0.00 0.00 34.09 1.40
2128 11173 9.955102 AATAAAACCCTCTCGTAGAAGTATTTT 57.045 29.630 0.00 0.00 34.09 1.82
2131 11176 8.768957 AAACCCTCTCGTAGAAGTATTTTAAC 57.231 34.615 0.00 0.00 34.09 2.01
2132 11177 7.472334 ACCCTCTCGTAGAAGTATTTTAACA 57.528 36.000 0.00 0.00 34.09 2.41
2133 11178 7.899973 ACCCTCTCGTAGAAGTATTTTAACAA 58.100 34.615 0.00 0.00 34.09 2.83
2134 11179 8.537858 ACCCTCTCGTAGAAGTATTTTAACAAT 58.462 33.333 0.00 0.00 34.09 2.71
2135 11180 8.818057 CCCTCTCGTAGAAGTATTTTAACAATG 58.182 37.037 0.00 0.00 34.09 2.82
2136 11181 9.367444 CCTCTCGTAGAAGTATTTTAACAATGT 57.633 33.333 0.00 0.00 34.09 2.71
2173 11218 9.654663 ATTTGTAGATACTACTTGAACTGTTCC 57.345 33.333 17.26 1.11 0.00 3.62
2174 11219 8.418597 TTGTAGATACTACTTGAACTGTTCCT 57.581 34.615 17.26 6.72 0.00 3.36
2175 11220 8.418597 TGTAGATACTACTTGAACTGTTCCTT 57.581 34.615 17.26 4.75 0.00 3.36
2176 11221 8.867097 TGTAGATACTACTTGAACTGTTCCTTT 58.133 33.333 17.26 4.41 0.00 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 9.372369 ACTTTTCATGTTTTCGGAAAATGTTTA 57.628 25.926 17.98 4.83 39.13 2.01
55 56 8.262715 ACTTTTCATGTTTTCGGAAAATGTTT 57.737 26.923 17.98 2.58 39.13 2.83
56 57 7.841915 ACTTTTCATGTTTTCGGAAAATGTT 57.158 28.000 17.98 4.79 39.13 2.71
57 58 7.841915 AACTTTTCATGTTTTCGGAAAATGT 57.158 28.000 17.98 8.05 39.13 2.71
58 59 9.553418 AAAAACTTTTCATGTTTTCGGAAAATG 57.447 25.926 17.98 13.32 43.94 2.32
182 183 8.183536 GCCTGTTTTTGAAATGTTCATTTTTCT 58.816 29.630 11.30 0.00 39.84 2.52
183 184 8.183536 AGCCTGTTTTTGAAATGTTCATTTTTC 58.816 29.630 11.30 2.94 39.84 2.29
184 185 8.054152 AGCCTGTTTTTGAAATGTTCATTTTT 57.946 26.923 11.30 0.00 39.84 1.94
185 186 7.628769 AGCCTGTTTTTGAAATGTTCATTTT 57.371 28.000 11.30 0.00 39.84 1.82
186 187 7.226523 GGTAGCCTGTTTTTGAAATGTTCATTT 59.773 33.333 10.04 10.04 39.84 2.32
187 188 6.705825 GGTAGCCTGTTTTTGAAATGTTCATT 59.294 34.615 0.00 0.00 39.84 2.57
188 189 6.041979 AGGTAGCCTGTTTTTGAAATGTTCAT 59.958 34.615 0.00 0.00 33.85 2.57
189 190 5.362430 AGGTAGCCTGTTTTTGAAATGTTCA 59.638 36.000 0.00 0.00 32.50 3.18
190 191 5.842907 AGGTAGCCTGTTTTTGAAATGTTC 58.157 37.500 0.00 0.00 29.57 3.18
191 192 5.869649 AGGTAGCCTGTTTTTGAAATGTT 57.130 34.783 0.00 0.00 29.57 2.71
192 193 6.068670 ACTAGGTAGCCTGTTTTTGAAATGT 58.931 36.000 0.00 0.00 34.61 2.71
193 194 6.575162 ACTAGGTAGCCTGTTTTTGAAATG 57.425 37.500 0.00 0.00 34.61 2.32
194 195 6.549736 ACAACTAGGTAGCCTGTTTTTGAAAT 59.450 34.615 0.00 0.00 34.61 2.17
195 196 5.889289 ACAACTAGGTAGCCTGTTTTTGAAA 59.111 36.000 0.00 0.00 34.61 2.69
196 197 5.298276 CACAACTAGGTAGCCTGTTTTTGAA 59.702 40.000 0.00 0.00 34.61 2.69
197 198 4.819630 CACAACTAGGTAGCCTGTTTTTGA 59.180 41.667 0.00 0.00 34.61 2.69
198 199 4.023193 CCACAACTAGGTAGCCTGTTTTTG 60.023 45.833 0.00 0.00 34.61 2.44
199 200 4.142038 CCACAACTAGGTAGCCTGTTTTT 58.858 43.478 0.00 0.00 34.61 1.94
200 201 3.497942 CCCACAACTAGGTAGCCTGTTTT 60.498 47.826 0.00 0.00 34.61 2.43
201 202 2.039879 CCCACAACTAGGTAGCCTGTTT 59.960 50.000 0.00 0.00 34.61 2.83
202 203 1.628846 CCCACAACTAGGTAGCCTGTT 59.371 52.381 0.00 0.00 34.61 3.16
203 204 1.276622 CCCACAACTAGGTAGCCTGT 58.723 55.000 0.00 0.00 34.61 4.00
204 205 0.541863 CCCCACAACTAGGTAGCCTG 59.458 60.000 0.00 0.00 34.61 4.85
205 206 0.118547 ACCCCACAACTAGGTAGCCT 59.881 55.000 0.00 0.00 37.71 4.58
206 207 1.761198 CTACCCCACAACTAGGTAGCC 59.239 57.143 2.71 0.00 44.85 3.93
209 210 2.560386 CCCACTACCCCACAACTAGGTA 60.560 54.545 0.00 0.00 35.02 3.08
210 211 1.652947 CCACTACCCCACAACTAGGT 58.347 55.000 0.00 0.00 37.69 3.08
211 212 0.909623 CCCACTACCCCACAACTAGG 59.090 60.000 0.00 0.00 0.00 3.02
212 213 0.252197 GCCCACTACCCCACAACTAG 59.748 60.000 0.00 0.00 0.00 2.57
213 214 0.178885 AGCCCACTACCCCACAACTA 60.179 55.000 0.00 0.00 0.00 2.24
214 215 1.463410 AGCCCACTACCCCACAACT 60.463 57.895 0.00 0.00 0.00 3.16
215 216 1.303317 CAGCCCACTACCCCACAAC 60.303 63.158 0.00 0.00 0.00 3.32
216 217 2.534396 CCAGCCCACTACCCCACAA 61.534 63.158 0.00 0.00 0.00 3.33
217 218 2.933287 CCAGCCCACTACCCCACA 60.933 66.667 0.00 0.00 0.00 4.17
218 219 4.426313 GCCAGCCCACTACCCCAC 62.426 72.222 0.00 0.00 0.00 4.61
229 230 1.250840 AACGAGAATTTGGGCCAGCC 61.251 55.000 6.23 0.00 0.00 4.85
230 231 1.401905 CTAACGAGAATTTGGGCCAGC 59.598 52.381 6.23 0.00 0.00 4.85
231 232 1.401905 GCTAACGAGAATTTGGGCCAG 59.598 52.381 6.23 0.00 0.00 4.85
232 233 1.459450 GCTAACGAGAATTTGGGCCA 58.541 50.000 0.00 0.00 0.00 5.36
233 234 0.738975 GGCTAACGAGAATTTGGGCC 59.261 55.000 0.00 0.00 0.00 5.80
234 235 1.401905 CAGGCTAACGAGAATTTGGGC 59.598 52.381 0.00 0.00 0.00 5.36
235 236 2.017049 CCAGGCTAACGAGAATTTGGG 58.983 52.381 0.00 0.00 0.00 4.12
236 237 2.939103 CTCCAGGCTAACGAGAATTTGG 59.061 50.000 0.00 0.00 0.00 3.28
237 238 3.600388 ACTCCAGGCTAACGAGAATTTG 58.400 45.455 11.20 0.00 0.00 2.32
238 239 3.983044 ACTCCAGGCTAACGAGAATTT 57.017 42.857 11.20 0.00 0.00 1.82
239 240 3.676324 CGAACTCCAGGCTAACGAGAATT 60.676 47.826 11.20 0.00 0.00 2.17
240 241 2.159226 CGAACTCCAGGCTAACGAGAAT 60.159 50.000 11.20 1.89 0.00 2.40
241 242 1.201647 CGAACTCCAGGCTAACGAGAA 59.798 52.381 11.20 0.00 0.00 2.87
242 243 0.809385 CGAACTCCAGGCTAACGAGA 59.191 55.000 11.20 0.00 0.00 4.04
243 244 0.802607 GCGAACTCCAGGCTAACGAG 60.803 60.000 0.00 0.00 0.00 4.18
244 245 1.214589 GCGAACTCCAGGCTAACGA 59.785 57.895 0.00 0.00 0.00 3.85
245 246 1.810030 GGCGAACTCCAGGCTAACG 60.810 63.158 0.00 0.00 0.00 3.18
246 247 1.019805 GTGGCGAACTCCAGGCTAAC 61.020 60.000 0.00 0.00 36.67 2.34
389 390 1.895798 TGGAAGTCATCAGTTCGAGCT 59.104 47.619 0.00 0.00 33.22 4.09
433 434 3.240302 CGGGGAAGGGATATAACTCAGT 58.760 50.000 0.00 0.00 0.00 3.41
470 4720 6.544564 CCCTTTGCCTTAGGATTCGTTAATTA 59.455 38.462 0.69 0.00 34.56 1.40
500 4750 2.979678 AGGAAGAGTGGCCTTGAGTTTA 59.020 45.455 3.32 0.00 0.00 2.01
572 4822 3.136443 AGGACCAGTTGACACTTGAATCA 59.864 43.478 0.00 0.00 0.00 2.57
580 4830 3.587797 TTCGATAGGACCAGTTGACAC 57.412 47.619 0.00 0.00 0.00 3.67
692 9737 7.254727 GGAATAGAACATGCTGAACAAGATCTC 60.255 40.741 0.00 0.00 32.27 2.75
718 9763 3.068307 CGGGTTCTTCTCCTACCAGTATG 59.932 52.174 0.00 0.00 33.51 2.39
812 9857 6.151144 CCTTCGAAAATGGTAAGATCTTTGGT 59.849 38.462 14.36 0.00 0.00 3.67
831 9876 1.344065 TGTAGCCCTTGTTCCTTCGA 58.656 50.000 0.00 0.00 0.00 3.71
841 9886 7.161404 GGAAATTGAAAAGAAATGTAGCCCTT 58.839 34.615 0.00 0.00 0.00 3.95
1157 10202 3.013921 GGTCAACCCGCTTCAAATATGA 58.986 45.455 0.00 0.00 0.00 2.15
1298 10343 5.869579 AGTACTATTAGTTACCGATCCCGA 58.130 41.667 0.85 0.00 38.22 5.14
1352 10397 8.605947 TCCTTTCCTTTTTCTGATCATAGAGAA 58.394 33.333 0.00 0.00 0.00 2.87
1356 10401 9.844257 ATAGTCCTTTCCTTTTTCTGATCATAG 57.156 33.333 0.00 0.00 0.00 2.23
1358 10403 9.539194 AAATAGTCCTTTCCTTTTTCTGATCAT 57.461 29.630 0.00 0.00 0.00 2.45
1359 10404 8.940397 AAATAGTCCTTTCCTTTTTCTGATCA 57.060 30.769 0.00 0.00 0.00 2.92
1360 10405 9.631452 CAAAATAGTCCTTTCCTTTTTCTGATC 57.369 33.333 0.00 0.00 0.00 2.92
1361 10406 9.147732 ACAAAATAGTCCTTTCCTTTTTCTGAT 57.852 29.630 0.00 0.00 0.00 2.90
1362 10407 8.533569 ACAAAATAGTCCTTTCCTTTTTCTGA 57.466 30.769 0.00 0.00 0.00 3.27
1363 10408 9.249457 GAACAAAATAGTCCTTTCCTTTTTCTG 57.751 33.333 0.00 0.00 0.00 3.02
1364 10409 8.421784 GGAACAAAATAGTCCTTTCCTTTTTCT 58.578 33.333 0.00 0.00 31.54 2.52
1365 10410 8.421784 AGGAACAAAATAGTCCTTTCCTTTTTC 58.578 33.333 0.00 0.00 39.91 2.29
1366 10411 8.319057 AGGAACAAAATAGTCCTTTCCTTTTT 57.681 30.769 0.00 0.00 39.91 1.94
1367 10412 7.914427 AGGAACAAAATAGTCCTTTCCTTTT 57.086 32.000 0.00 0.00 39.91 2.27
1368 10413 7.176865 GCTAGGAACAAAATAGTCCTTTCCTTT 59.823 37.037 6.03 0.00 39.91 3.11
1369 10414 6.659668 GCTAGGAACAAAATAGTCCTTTCCTT 59.340 38.462 6.03 0.00 39.91 3.36
1370 10415 6.181190 GCTAGGAACAAAATAGTCCTTTCCT 58.819 40.000 6.00 6.00 44.06 3.36
1371 10416 5.357314 GGCTAGGAACAAAATAGTCCTTTCC 59.643 44.000 0.00 0.00 33.96 3.13
1372 10417 5.357314 GGGCTAGGAACAAAATAGTCCTTTC 59.643 44.000 0.00 0.00 38.12 2.62
1373 10418 5.262009 GGGCTAGGAACAAAATAGTCCTTT 58.738 41.667 0.00 0.00 38.12 3.11
1374 10419 4.325109 GGGGCTAGGAACAAAATAGTCCTT 60.325 45.833 2.44 0.00 40.46 3.36
1375 10420 3.202373 GGGGCTAGGAACAAAATAGTCCT 59.798 47.826 2.44 0.00 40.46 3.85
1376 10421 3.202373 AGGGGCTAGGAACAAAATAGTCC 59.798 47.826 0.00 0.00 40.00 3.85
1377 10422 4.200092 CAGGGGCTAGGAACAAAATAGTC 58.800 47.826 0.00 0.00 0.00 2.59
1378 10423 3.053619 CCAGGGGCTAGGAACAAAATAGT 60.054 47.826 0.00 0.00 0.00 2.12
1379 10424 3.555966 CCAGGGGCTAGGAACAAAATAG 58.444 50.000 0.00 0.00 0.00 1.73
1380 10425 2.243736 CCCAGGGGCTAGGAACAAAATA 59.756 50.000 0.00 0.00 0.00 1.40
1381 10426 1.007118 CCCAGGGGCTAGGAACAAAAT 59.993 52.381 0.00 0.00 0.00 1.82
1382 10427 0.407918 CCCAGGGGCTAGGAACAAAA 59.592 55.000 0.00 0.00 0.00 2.44
1383 10428 1.506028 CCCCAGGGGCTAGGAACAAA 61.506 60.000 13.35 0.00 35.35 2.83
1384 10429 1.928567 CCCCAGGGGCTAGGAACAA 60.929 63.158 13.35 0.00 35.35 2.83
1385 10430 2.286121 CCCCAGGGGCTAGGAACA 60.286 66.667 13.35 0.00 35.35 3.18
1395 10440 1.645710 ATTCTATCTACGCCCCAGGG 58.354 55.000 0.00 0.00 38.57 4.45
1396 10441 4.087182 TCTAATTCTATCTACGCCCCAGG 58.913 47.826 0.00 0.00 0.00 4.45
1397 10442 5.923733 ATCTAATTCTATCTACGCCCCAG 57.076 43.478 0.00 0.00 0.00 4.45
1398 10443 7.786046 TTTATCTAATTCTATCTACGCCCCA 57.214 36.000 0.00 0.00 0.00 4.96
1441 10486 7.066645 ACGGAATTACTTTGGTCTAATTTAGGC 59.933 37.037 3.66 1.47 0.00 3.93
1442 10487 8.502105 ACGGAATTACTTTGGTCTAATTTAGG 57.498 34.615 3.66 0.00 0.00 2.69
1443 10488 9.379791 AGACGGAATTACTTTGGTCTAATTTAG 57.620 33.333 0.00 0.00 33.33 1.85
1444 10489 9.158233 CAGACGGAATTACTTTGGTCTAATTTA 57.842 33.333 0.00 0.00 33.73 1.40
1445 10490 7.361799 GCAGACGGAATTACTTTGGTCTAATTT 60.362 37.037 0.00 0.00 33.73 1.82
1446 10491 6.093633 GCAGACGGAATTACTTTGGTCTAATT 59.906 38.462 0.00 0.00 33.73 1.40
1447 10492 5.585047 GCAGACGGAATTACTTTGGTCTAAT 59.415 40.000 0.00 0.00 33.73 1.73
1448 10493 4.933400 GCAGACGGAATTACTTTGGTCTAA 59.067 41.667 0.00 0.00 33.73 2.10
1449 10494 4.222145 AGCAGACGGAATTACTTTGGTCTA 59.778 41.667 0.00 0.00 33.73 2.59
1450 10495 3.008049 AGCAGACGGAATTACTTTGGTCT 59.992 43.478 0.00 0.00 35.28 3.85
1451 10496 3.335579 AGCAGACGGAATTACTTTGGTC 58.664 45.455 0.00 0.00 0.00 4.02
1452 10497 3.418684 AGCAGACGGAATTACTTTGGT 57.581 42.857 0.00 0.00 0.00 3.67
1453 10498 4.755411 TCTAGCAGACGGAATTACTTTGG 58.245 43.478 0.00 0.00 0.00 3.28
1454 10499 6.910536 ATTCTAGCAGACGGAATTACTTTG 57.089 37.500 0.00 0.00 0.00 2.77
1455 10500 8.475639 TCTTATTCTAGCAGACGGAATTACTTT 58.524 33.333 0.00 0.00 32.78 2.66
1456 10501 8.008513 TCTTATTCTAGCAGACGGAATTACTT 57.991 34.615 0.00 0.00 32.78 2.24
1457 10502 7.584122 TCTTATTCTAGCAGACGGAATTACT 57.416 36.000 0.00 0.00 32.78 2.24
1458 10503 8.644318 TTTCTTATTCTAGCAGACGGAATTAC 57.356 34.615 0.00 0.00 32.78 1.89
1459 10504 9.661563 TTTTTCTTATTCTAGCAGACGGAATTA 57.338 29.630 0.00 0.00 32.78 1.40
1460 10505 8.561738 TTTTTCTTATTCTAGCAGACGGAATT 57.438 30.769 0.00 0.00 32.78 2.17
1461 10506 7.201652 GCTTTTTCTTATTCTAGCAGACGGAAT 60.202 37.037 0.00 0.00 34.59 3.01
1462 10507 6.092259 GCTTTTTCTTATTCTAGCAGACGGAA 59.908 38.462 0.00 0.00 0.00 4.30
1463 10508 5.581085 GCTTTTTCTTATTCTAGCAGACGGA 59.419 40.000 0.00 0.00 0.00 4.69
1464 10509 5.500931 CGCTTTTTCTTATTCTAGCAGACGG 60.501 44.000 0.00 0.00 0.00 4.79
1465 10510 5.484958 CGCTTTTTCTTATTCTAGCAGACG 58.515 41.667 0.00 0.00 0.00 4.18
1466 10511 5.064071 AGCGCTTTTTCTTATTCTAGCAGAC 59.936 40.000 2.64 0.00 0.00 3.51
1467 10512 5.178797 AGCGCTTTTTCTTATTCTAGCAGA 58.821 37.500 2.64 0.00 0.00 4.26
1468 10513 5.476752 AGCGCTTTTTCTTATTCTAGCAG 57.523 39.130 2.64 0.00 0.00 4.24
1469 10514 5.880054 AAGCGCTTTTTCTTATTCTAGCA 57.120 34.783 18.98 0.00 0.00 3.49
1470 10515 5.739630 GGAAAGCGCTTTTTCTTATTCTAGC 59.260 40.000 34.01 17.04 37.26 3.42
1471 10516 5.960105 CGGAAAGCGCTTTTTCTTATTCTAG 59.040 40.000 34.01 14.18 37.26 2.43
1472 10517 5.640357 TCGGAAAGCGCTTTTTCTTATTCTA 59.360 36.000 34.01 10.44 37.26 2.10
1473 10518 4.454504 TCGGAAAGCGCTTTTTCTTATTCT 59.545 37.500 34.01 10.19 37.26 2.40
1474 10519 4.719040 TCGGAAAGCGCTTTTTCTTATTC 58.281 39.130 34.01 19.51 37.26 1.75
1475 10520 4.759516 TCGGAAAGCGCTTTTTCTTATT 57.240 36.364 34.01 11.79 37.26 1.40
1476 10521 4.965119 ATCGGAAAGCGCTTTTTCTTAT 57.035 36.364 34.01 20.09 37.26 1.73
1477 10522 4.214545 TGAATCGGAAAGCGCTTTTTCTTA 59.785 37.500 34.01 18.89 37.26 2.10
1478 10523 3.004315 TGAATCGGAAAGCGCTTTTTCTT 59.996 39.130 34.01 23.59 37.26 2.52
1479 10524 2.552315 TGAATCGGAAAGCGCTTTTTCT 59.448 40.909 34.01 14.63 37.26 2.52
1480 10525 2.656897 GTGAATCGGAAAGCGCTTTTTC 59.343 45.455 34.01 29.78 36.55 2.29
1481 10526 2.607038 GGTGAATCGGAAAGCGCTTTTT 60.607 45.455 34.01 24.32 32.11 1.94
1482 10527 1.068541 GGTGAATCGGAAAGCGCTTTT 60.069 47.619 34.01 19.53 32.11 2.27
1483 10528 0.521735 GGTGAATCGGAAAGCGCTTT 59.478 50.000 34.16 34.16 35.14 3.51
1484 10529 0.605319 TGGTGAATCGGAAAGCGCTT 60.605 50.000 18.98 18.98 0.00 4.68
1485 10530 0.605319 TTGGTGAATCGGAAAGCGCT 60.605 50.000 2.64 2.64 0.00 5.92
1486 10531 0.239879 TTTGGTGAATCGGAAAGCGC 59.760 50.000 0.00 0.00 0.00 5.92
1487 10532 1.401018 GGTTTGGTGAATCGGAAAGCG 60.401 52.381 0.00 0.00 0.00 4.68
1488 10533 1.611491 TGGTTTGGTGAATCGGAAAGC 59.389 47.619 0.00 0.00 0.00 3.51
1489 10534 4.519540 ATTGGTTTGGTGAATCGGAAAG 57.480 40.909 0.00 0.00 0.00 2.62
1490 10535 4.586841 AGAATTGGTTTGGTGAATCGGAAA 59.413 37.500 0.00 0.00 0.00 3.13
1491 10536 4.148838 AGAATTGGTTTGGTGAATCGGAA 58.851 39.130 0.00 0.00 0.00 4.30
1492 10537 3.761897 AGAATTGGTTTGGTGAATCGGA 58.238 40.909 0.00 0.00 0.00 4.55
1493 10538 4.519540 AAGAATTGGTTTGGTGAATCGG 57.480 40.909 0.00 0.00 0.00 4.18
1494 10539 7.066284 AGAGATAAGAATTGGTTTGGTGAATCG 59.934 37.037 0.00 0.00 0.00 3.34
1495 10540 8.286191 AGAGATAAGAATTGGTTTGGTGAATC 57.714 34.615 0.00 0.00 0.00 2.52
1496 10541 8.655935 AAGAGATAAGAATTGGTTTGGTGAAT 57.344 30.769 0.00 0.00 0.00 2.57
1497 10542 8.477419 AAAGAGATAAGAATTGGTTTGGTGAA 57.523 30.769 0.00 0.00 0.00 3.18
1498 10543 7.944554 AGAAAGAGATAAGAATTGGTTTGGTGA 59.055 33.333 0.00 0.00 0.00 4.02
1499 10544 8.025445 CAGAAAGAGATAAGAATTGGTTTGGTG 58.975 37.037 0.00 0.00 0.00 4.17
1500 10545 7.944554 TCAGAAAGAGATAAGAATTGGTTTGGT 59.055 33.333 0.00 0.00 0.00 3.67
1501 10546 8.340618 TCAGAAAGAGATAAGAATTGGTTTGG 57.659 34.615 0.00 0.00 0.00 3.28
1504 10549 9.799106 TCTTTCAGAAAGAGATAAGAATTGGTT 57.201 29.630 19.96 0.00 42.31 3.67
1608 10653 8.929487 TGAATTTAACCAACTAAACCCATTCTT 58.071 29.630 0.00 0.00 0.00 2.52
1609 10654 8.485578 TGAATTTAACCAACTAAACCCATTCT 57.514 30.769 0.00 0.00 0.00 2.40
1610 10655 9.549078 TTTGAATTTAACCAACTAAACCCATTC 57.451 29.630 0.00 0.00 0.00 2.67
1611 10656 9.907229 TTTTGAATTTAACCAACTAAACCCATT 57.093 25.926 0.00 0.00 0.00 3.16
1612 10657 9.907229 TTTTTGAATTTAACCAACTAAACCCAT 57.093 25.926 0.00 0.00 0.00 4.00
1613 10658 9.384764 CTTTTTGAATTTAACCAACTAAACCCA 57.615 29.630 0.00 0.00 0.00 4.51
1614 10659 9.386010 ACTTTTTGAATTTAACCAACTAAACCC 57.614 29.630 0.00 0.00 0.00 4.11
1635 10680 9.783256 CGCTGCCTAGTTATTTTATTAACTTTT 57.217 29.630 2.54 0.00 41.47 2.27
1636 10681 9.169592 TCGCTGCCTAGTTATTTTATTAACTTT 57.830 29.630 2.54 0.00 41.47 2.66
1637 10682 8.726870 TCGCTGCCTAGTTATTTTATTAACTT 57.273 30.769 2.54 0.00 41.47 2.66
1638 10683 8.726870 TTCGCTGCCTAGTTATTTTATTAACT 57.273 30.769 0.00 2.77 43.19 2.24
1639 10684 8.610035 ACTTCGCTGCCTAGTTATTTTATTAAC 58.390 33.333 0.00 0.00 33.20 2.01
1640 10685 8.726870 ACTTCGCTGCCTAGTTATTTTATTAA 57.273 30.769 0.00 0.00 0.00 1.40
1641 10686 8.726870 AACTTCGCTGCCTAGTTATTTTATTA 57.273 30.769 11.05 0.00 30.75 0.98
1642 10687 7.625828 AACTTCGCTGCCTAGTTATTTTATT 57.374 32.000 11.05 0.00 30.75 1.40
1643 10688 8.904099 ATAACTTCGCTGCCTAGTTATTTTAT 57.096 30.769 19.89 7.57 40.40 1.40
1644 10689 8.726870 AATAACTTCGCTGCCTAGTTATTTTA 57.273 30.769 25.47 10.18 45.63 1.52
1645 10690 7.625828 AATAACTTCGCTGCCTAGTTATTTT 57.374 32.000 25.47 15.15 45.63 1.82
1648 10693 8.904099 ATAAAATAACTTCGCTGCCTAGTTAT 57.096 30.769 19.89 19.89 43.37 1.89
1649 10694 8.726870 AATAAAATAACTTCGCTGCCTAGTTA 57.273 30.769 17.91 17.91 38.36 2.24
1650 10695 7.625828 AATAAAATAACTTCGCTGCCTAGTT 57.374 32.000 15.45 15.45 36.23 2.24
1651 10696 7.226128 GGTAATAAAATAACTTCGCTGCCTAGT 59.774 37.037 0.00 0.00 0.00 2.57
1652 10697 7.441458 AGGTAATAAAATAACTTCGCTGCCTAG 59.559 37.037 0.00 0.00 0.00 3.02
1653 10698 7.277396 AGGTAATAAAATAACTTCGCTGCCTA 58.723 34.615 0.00 0.00 0.00 3.93
1654 10699 6.120220 AGGTAATAAAATAACTTCGCTGCCT 58.880 36.000 0.00 0.00 0.00 4.75
1655 10700 6.373186 AGGTAATAAAATAACTTCGCTGCC 57.627 37.500 0.00 0.00 0.00 4.85
1656 10701 9.946165 ATTTAGGTAATAAAATAACTTCGCTGC 57.054 29.630 0.00 0.00 36.94 5.25
1751 10796 9.651913 AGCTGTTTCATCTTTGTTTTAAAGAAA 57.348 25.926 6.23 0.31 39.43 2.52
1752 10797 9.301153 GAGCTGTTTCATCTTTGTTTTAAAGAA 57.699 29.630 6.23 0.00 39.43 2.52
1753 10798 8.686334 AGAGCTGTTTCATCTTTGTTTTAAAGA 58.314 29.630 0.00 4.75 40.17 2.52
1754 10799 8.862550 AGAGCTGTTTCATCTTTGTTTTAAAG 57.137 30.769 0.00 0.00 0.00 1.85
1755 10800 8.686334 AGAGAGCTGTTTCATCTTTGTTTTAAA 58.314 29.630 0.00 0.00 0.00 1.52
1756 10801 8.225603 AGAGAGCTGTTTCATCTTTGTTTTAA 57.774 30.769 0.00 0.00 0.00 1.52
1757 10802 7.807977 AGAGAGCTGTTTCATCTTTGTTTTA 57.192 32.000 0.00 0.00 0.00 1.52
1758 10803 6.705863 AGAGAGCTGTTTCATCTTTGTTTT 57.294 33.333 0.00 0.00 0.00 2.43
1759 10804 6.319658 TCAAGAGAGCTGTTTCATCTTTGTTT 59.680 34.615 0.00 0.00 0.00 2.83
1760 10805 5.824624 TCAAGAGAGCTGTTTCATCTTTGTT 59.175 36.000 0.00 0.00 0.00 2.83
1761 10806 5.371526 TCAAGAGAGCTGTTTCATCTTTGT 58.628 37.500 0.00 0.00 0.00 2.83
1762 10807 5.936686 TCAAGAGAGCTGTTTCATCTTTG 57.063 39.130 0.00 0.00 0.00 2.77
1763 10808 5.647225 GGATCAAGAGAGCTGTTTCATCTTT 59.353 40.000 0.00 0.00 0.00 2.52
1764 10809 5.184711 GGATCAAGAGAGCTGTTTCATCTT 58.815 41.667 0.00 0.00 0.00 2.40
1765 10810 4.224594 TGGATCAAGAGAGCTGTTTCATCT 59.775 41.667 0.00 0.00 0.00 2.90
1766 10811 4.511527 TGGATCAAGAGAGCTGTTTCATC 58.488 43.478 0.00 0.00 0.00 2.92
1767 10812 4.019501 ACTGGATCAAGAGAGCTGTTTCAT 60.020 41.667 3.42 0.00 0.00 2.57
1768 10813 3.326006 ACTGGATCAAGAGAGCTGTTTCA 59.674 43.478 3.42 0.00 0.00 2.69
1769 10814 3.936564 ACTGGATCAAGAGAGCTGTTTC 58.063 45.455 3.42 0.00 0.00 2.78
1770 10815 4.322567 GAACTGGATCAAGAGAGCTGTTT 58.677 43.478 3.42 0.00 31.26 2.83
1771 10816 3.307339 GGAACTGGATCAAGAGAGCTGTT 60.307 47.826 3.42 0.00 32.75 3.16
1772 10817 2.235898 GGAACTGGATCAAGAGAGCTGT 59.764 50.000 3.42 0.00 0.00 4.40
1773 10818 2.235650 TGGAACTGGATCAAGAGAGCTG 59.764 50.000 3.42 0.00 0.00 4.24
1774 10819 2.544721 TGGAACTGGATCAAGAGAGCT 58.455 47.619 3.42 0.00 0.00 4.09
1775 10820 3.557228 ATGGAACTGGATCAAGAGAGC 57.443 47.619 3.42 0.00 0.00 4.09
1776 10821 9.050601 GTTAATTATGGAACTGGATCAAGAGAG 57.949 37.037 3.42 0.00 0.00 3.20
1777 10822 8.772250 AGTTAATTATGGAACTGGATCAAGAGA 58.228 33.333 3.42 0.00 34.61 3.10
1778 10823 8.834465 CAGTTAATTATGGAACTGGATCAAGAG 58.166 37.037 3.42 0.00 45.76 2.85
1779 10824 8.737168 CAGTTAATTATGGAACTGGATCAAGA 57.263 34.615 3.42 0.00 45.76 3.02
1788 10833 9.739276 TTCACTCAATCAGTTAATTATGGAACT 57.261 29.630 0.00 0.00 36.31 3.01
1792 10837 9.956720 GGAATTCACTCAATCAGTTAATTATGG 57.043 33.333 7.93 0.00 38.51 2.74
1796 10841 9.865321 CATTGGAATTCACTCAATCAGTTAATT 57.135 29.630 7.93 0.00 40.29 1.40
1797 10842 9.246670 TCATTGGAATTCACTCAATCAGTTAAT 57.753 29.630 7.93 0.00 31.29 1.40
1798 10843 8.634335 TCATTGGAATTCACTCAATCAGTTAA 57.366 30.769 7.93 0.00 30.26 2.01
1799 10844 8.634335 TTCATTGGAATTCACTCAATCAGTTA 57.366 30.769 7.93 0.00 30.26 2.24
1800 10845 7.528996 TTCATTGGAATTCACTCAATCAGTT 57.471 32.000 7.93 0.00 30.26 3.16
1801 10846 7.528996 TTTCATTGGAATTCACTCAATCAGT 57.471 32.000 7.93 0.00 31.24 3.41
1802 10847 7.330208 GGTTTTCATTGGAATTCACTCAATCAG 59.670 37.037 7.93 0.00 31.93 2.90
1803 10848 7.015487 AGGTTTTCATTGGAATTCACTCAATCA 59.985 33.333 7.93 0.00 31.93 2.57
1804 10849 7.381323 AGGTTTTCATTGGAATTCACTCAATC 58.619 34.615 7.93 0.00 31.93 2.67
1805 10850 7.307131 AGGTTTTCATTGGAATTCACTCAAT 57.693 32.000 7.93 5.28 31.93 2.57
1806 10851 6.729690 AGGTTTTCATTGGAATTCACTCAA 57.270 33.333 7.93 2.98 31.93 3.02
1807 10852 7.451255 ACATAGGTTTTCATTGGAATTCACTCA 59.549 33.333 7.93 0.00 31.93 3.41
1808 10853 7.830739 ACATAGGTTTTCATTGGAATTCACTC 58.169 34.615 7.93 0.00 31.93 3.51
1809 10854 7.781324 ACATAGGTTTTCATTGGAATTCACT 57.219 32.000 7.93 0.00 31.93 3.41
1810 10855 8.831715 AAACATAGGTTTTCATTGGAATTCAC 57.168 30.769 7.93 0.00 44.63 3.18
1896 10941 9.623000 GGGAATTGCTATTCTAAAACTTAGGTA 57.377 33.333 18.26 0.00 40.07 3.08
1897 10942 8.113462 TGGGAATTGCTATTCTAAAACTTAGGT 58.887 33.333 18.26 0.00 40.07 3.08
1898 10943 8.519799 TGGGAATTGCTATTCTAAAACTTAGG 57.480 34.615 18.26 0.00 40.07 2.69
1901 10946 8.478066 GGAATGGGAATTGCTATTCTAAAACTT 58.522 33.333 26.98 0.00 40.07 2.66
1902 10947 7.619302 TGGAATGGGAATTGCTATTCTAAAACT 59.381 33.333 26.98 0.00 40.07 2.66
1903 10948 7.706607 GTGGAATGGGAATTGCTATTCTAAAAC 59.293 37.037 26.98 18.68 40.07 2.43
1904 10949 7.147742 GGTGGAATGGGAATTGCTATTCTAAAA 60.148 37.037 26.98 13.36 40.07 1.52
1905 10950 6.323739 GGTGGAATGGGAATTGCTATTCTAAA 59.676 38.462 26.98 15.23 40.07 1.85
1906 10951 5.833131 GGTGGAATGGGAATTGCTATTCTAA 59.167 40.000 26.98 17.12 40.07 2.10
1907 10952 5.385198 GGTGGAATGGGAATTGCTATTCTA 58.615 41.667 26.98 21.74 40.07 2.10
1908 10953 4.218312 GGTGGAATGGGAATTGCTATTCT 58.782 43.478 26.98 2.06 40.07 2.40
1909 10954 3.321968 GGGTGGAATGGGAATTGCTATTC 59.678 47.826 22.49 22.49 39.57 1.75
1910 10955 3.308401 GGGTGGAATGGGAATTGCTATT 58.692 45.455 8.28 8.28 0.00 1.73
1911 10956 2.247111 TGGGTGGAATGGGAATTGCTAT 59.753 45.455 0.00 0.00 0.00 2.97
1912 10957 1.643286 TGGGTGGAATGGGAATTGCTA 59.357 47.619 0.00 0.00 0.00 3.49
1913 10958 0.413037 TGGGTGGAATGGGAATTGCT 59.587 50.000 0.00 0.00 0.00 3.91
1914 10959 1.274712 TTGGGTGGAATGGGAATTGC 58.725 50.000 0.00 0.00 0.00 3.56
1915 10960 3.327464 AGTTTTGGGTGGAATGGGAATTG 59.673 43.478 0.00 0.00 0.00 2.32
1916 10961 3.597182 AGTTTTGGGTGGAATGGGAATT 58.403 40.909 0.00 0.00 0.00 2.17
1917 10962 3.274281 AGTTTTGGGTGGAATGGGAAT 57.726 42.857 0.00 0.00 0.00 3.01
1918 10963 2.785357 AGTTTTGGGTGGAATGGGAA 57.215 45.000 0.00 0.00 0.00 3.97
1919 10964 2.785357 AAGTTTTGGGTGGAATGGGA 57.215 45.000 0.00 0.00 0.00 4.37
1920 10965 3.260632 CCTAAAGTTTTGGGTGGAATGGG 59.739 47.826 8.09 0.00 34.45 4.00
1921 10966 4.156477 TCCTAAAGTTTTGGGTGGAATGG 58.844 43.478 14.91 0.00 39.55 3.16
1922 10967 5.799827 TTCCTAAAGTTTTGGGTGGAATG 57.200 39.130 14.91 0.00 39.55 2.67
1923 10968 6.013725 GGAATTCCTAAAGTTTTGGGTGGAAT 60.014 38.462 17.73 12.44 42.46 3.01
1924 10969 5.305902 GGAATTCCTAAAGTTTTGGGTGGAA 59.694 40.000 17.73 11.04 39.55 3.53
1925 10970 4.836175 GGAATTCCTAAAGTTTTGGGTGGA 59.164 41.667 17.73 3.77 39.55 4.02
1926 10971 4.838423 AGGAATTCCTAAAGTTTTGGGTGG 59.162 41.667 25.99 1.71 46.48 4.61
1944 10989 9.847224 ACGAATTTATACCAACTATCAAGGAAT 57.153 29.630 0.00 0.00 0.00 3.01
1949 10994 9.048446 GGCTTACGAATTTATACCAACTATCAA 57.952 33.333 0.00 0.00 0.00 2.57
1950 10995 8.597662 GGCTTACGAATTTATACCAACTATCA 57.402 34.615 0.00 0.00 0.00 2.15
1975 11020 2.901051 AAAGCGTATCAGCCGACCCG 62.901 60.000 0.00 0.00 38.01 5.28
1976 11021 0.103572 TAAAGCGTATCAGCCGACCC 59.896 55.000 0.00 0.00 38.01 4.46
1977 11022 1.930567 TTAAAGCGTATCAGCCGACC 58.069 50.000 0.00 0.00 38.01 4.79
1978 11023 4.330740 TTTTTAAAGCGTATCAGCCGAC 57.669 40.909 0.00 0.00 38.01 4.79
1979 11024 3.372822 CCTTTTTAAAGCGTATCAGCCGA 59.627 43.478 0.00 0.00 38.01 5.54
1980 11025 3.126343 ACCTTTTTAAAGCGTATCAGCCG 59.874 43.478 0.00 0.00 38.01 5.52
1981 11026 4.696899 ACCTTTTTAAAGCGTATCAGCC 57.303 40.909 0.00 0.00 38.01 4.85
1982 11027 5.939457 AGAACCTTTTTAAAGCGTATCAGC 58.061 37.500 0.00 0.00 34.69 4.26
1983 11028 7.360361 ACAAGAACCTTTTTAAAGCGTATCAG 58.640 34.615 0.00 0.00 34.69 2.90
1984 11029 7.266922 ACAAGAACCTTTTTAAAGCGTATCA 57.733 32.000 0.00 0.00 34.69 2.15
1985 11030 8.074370 AGAACAAGAACCTTTTTAAAGCGTATC 58.926 33.333 0.00 0.00 34.69 2.24
1986 11031 7.937649 AGAACAAGAACCTTTTTAAAGCGTAT 58.062 30.769 0.00 0.00 34.69 3.06
1987 11032 7.324354 AGAACAAGAACCTTTTTAAAGCGTA 57.676 32.000 0.00 0.00 34.69 4.42
1988 11033 6.203808 AGAACAAGAACCTTTTTAAAGCGT 57.796 33.333 0.00 0.00 34.69 5.07
2016 11061 9.853177 TCAAAAGAGAAAGACTAGAAAAGGAAT 57.147 29.630 0.00 0.00 0.00 3.01
2017 11062 9.853177 ATCAAAAGAGAAAGACTAGAAAAGGAA 57.147 29.630 0.00 0.00 0.00 3.36
2018 11063 9.277783 CATCAAAAGAGAAAGACTAGAAAAGGA 57.722 33.333 0.00 0.00 0.00 3.36
2019 11064 9.061435 ACATCAAAAGAGAAAGACTAGAAAAGG 57.939 33.333 0.00 0.00 0.00 3.11
2021 11066 8.765219 CGACATCAAAAGAGAAAGACTAGAAAA 58.235 33.333 0.00 0.00 0.00 2.29
2022 11067 7.095607 GCGACATCAAAAGAGAAAGACTAGAAA 60.096 37.037 0.00 0.00 0.00 2.52
2023 11068 6.366332 GCGACATCAAAAGAGAAAGACTAGAA 59.634 38.462 0.00 0.00 0.00 2.10
2024 11069 5.864474 GCGACATCAAAAGAGAAAGACTAGA 59.136 40.000 0.00 0.00 0.00 2.43
2025 11070 5.635280 TGCGACATCAAAAGAGAAAGACTAG 59.365 40.000 0.00 0.00 0.00 2.57
2026 11071 5.538118 TGCGACATCAAAAGAGAAAGACTA 58.462 37.500 0.00 0.00 0.00 2.59
2027 11072 4.380531 TGCGACATCAAAAGAGAAAGACT 58.619 39.130 0.00 0.00 0.00 3.24
2028 11073 4.732285 TGCGACATCAAAAGAGAAAGAC 57.268 40.909 0.00 0.00 0.00 3.01
2029 11074 5.296780 ACTTTGCGACATCAAAAGAGAAAGA 59.703 36.000 9.77 0.00 35.75 2.52
2030 11075 5.514279 ACTTTGCGACATCAAAAGAGAAAG 58.486 37.500 9.77 0.00 35.75 2.62
2031 11076 5.499139 ACTTTGCGACATCAAAAGAGAAA 57.501 34.783 9.77 0.00 35.75 2.52
2032 11077 5.065859 TCAACTTTGCGACATCAAAAGAGAA 59.934 36.000 9.77 0.00 35.75 2.87
2033 11078 4.574421 TCAACTTTGCGACATCAAAAGAGA 59.426 37.500 9.77 5.88 35.75 3.10
2034 11079 4.847633 TCAACTTTGCGACATCAAAAGAG 58.152 39.130 9.77 4.28 35.75 2.85
2035 11080 4.891627 TCAACTTTGCGACATCAAAAGA 57.108 36.364 9.77 0.00 35.75 2.52
2036 11081 5.276348 GGTTTCAACTTTGCGACATCAAAAG 60.276 40.000 0.00 0.00 35.75 2.27
2037 11082 4.564769 GGTTTCAACTTTGCGACATCAAAA 59.435 37.500 0.00 0.00 35.75 2.44
2038 11083 4.109050 GGTTTCAACTTTGCGACATCAAA 58.891 39.130 0.00 0.00 35.01 2.69
2039 11084 3.129462 TGGTTTCAACTTTGCGACATCAA 59.871 39.130 0.00 0.00 0.00 2.57
2040 11085 2.685388 TGGTTTCAACTTTGCGACATCA 59.315 40.909 0.00 0.00 0.00 3.07
2041 11086 3.347958 TGGTTTCAACTTTGCGACATC 57.652 42.857 0.00 0.00 0.00 3.06
2042 11087 3.380004 TCTTGGTTTCAACTTTGCGACAT 59.620 39.130 0.00 0.00 0.00 3.06
2043 11088 2.750166 TCTTGGTTTCAACTTTGCGACA 59.250 40.909 0.00 0.00 0.00 4.35
2044 11089 3.414549 TCTTGGTTTCAACTTTGCGAC 57.585 42.857 0.00 0.00 0.00 5.19
2045 11090 4.442375 TTTCTTGGTTTCAACTTTGCGA 57.558 36.364 0.00 0.00 0.00 5.10
2046 11091 6.863126 AGATATTTCTTGGTTTCAACTTTGCG 59.137 34.615 0.00 0.00 0.00 4.85
2047 11092 7.653311 ACAGATATTTCTTGGTTTCAACTTTGC 59.347 33.333 0.00 0.00 0.00 3.68
2048 11093 9.533253 AACAGATATTTCTTGGTTTCAACTTTG 57.467 29.630 0.00 0.00 0.00 2.77
2055 11100 9.788960 GGAACATAACAGATATTTCTTGGTTTC 57.211 33.333 0.00 0.00 0.00 2.78
2056 11101 9.533831 AGGAACATAACAGATATTTCTTGGTTT 57.466 29.630 0.00 0.00 0.00 3.27
2057 11102 8.960591 CAGGAACATAACAGATATTTCTTGGTT 58.039 33.333 0.00 0.00 0.00 3.67
2058 11103 8.328758 TCAGGAACATAACAGATATTTCTTGGT 58.671 33.333 0.00 0.00 29.50 3.67
2059 11104 8.737168 TCAGGAACATAACAGATATTTCTTGG 57.263 34.615 0.00 0.00 29.50 3.61
2061 11106 9.911788 ACATCAGGAACATAACAGATATTTCTT 57.088 29.630 0.00 0.00 0.00 2.52
2062 11107 9.911788 AACATCAGGAACATAACAGATATTTCT 57.088 29.630 0.00 0.00 0.00 2.52
2065 11110 9.125026 GGAAACATCAGGAACATAACAGATATT 57.875 33.333 0.00 0.00 0.00 1.28
2066 11111 7.442364 CGGAAACATCAGGAACATAACAGATAT 59.558 37.037 0.00 0.00 0.00 1.63
2067 11112 6.761242 CGGAAACATCAGGAACATAACAGATA 59.239 38.462 0.00 0.00 0.00 1.98
2068 11113 5.586243 CGGAAACATCAGGAACATAACAGAT 59.414 40.000 0.00 0.00 0.00 2.90
2069 11114 4.935205 CGGAAACATCAGGAACATAACAGA 59.065 41.667 0.00 0.00 0.00 3.41
2070 11115 4.935205 TCGGAAACATCAGGAACATAACAG 59.065 41.667 0.00 0.00 0.00 3.16
2071 11116 4.900684 TCGGAAACATCAGGAACATAACA 58.099 39.130 0.00 0.00 0.00 2.41
2072 11117 5.180492 TGTTCGGAAACATCAGGAACATAAC 59.820 40.000 9.28 0.00 41.25 1.89
2073 11118 5.180492 GTGTTCGGAAACATCAGGAACATAA 59.820 40.000 13.84 0.00 46.58 1.90
2074 11119 4.693566 GTGTTCGGAAACATCAGGAACATA 59.306 41.667 13.84 0.00 46.58 2.29
2075 11120 3.502211 GTGTTCGGAAACATCAGGAACAT 59.498 43.478 13.84 0.00 46.58 2.71
2076 11121 2.875933 GTGTTCGGAAACATCAGGAACA 59.124 45.455 9.28 9.28 46.58 3.18
2077 11122 3.139077 AGTGTTCGGAAACATCAGGAAC 58.861 45.455 0.00 0.00 46.58 3.62
2078 11123 3.485463 AGTGTTCGGAAACATCAGGAA 57.515 42.857 0.00 0.00 46.58 3.36
2079 11124 3.485463 AAGTGTTCGGAAACATCAGGA 57.515 42.857 0.00 0.00 46.58 3.86
2080 11125 3.563808 TGAAAGTGTTCGGAAACATCAGG 59.436 43.478 0.00 0.00 46.58 3.86
2081 11126 4.811555 TGAAAGTGTTCGGAAACATCAG 57.188 40.909 0.00 0.00 46.58 2.90
2082 11127 5.766150 ATTGAAAGTGTTCGGAAACATCA 57.234 34.783 0.00 0.00 46.58 3.07
2083 11128 8.476925 GTTTTATTGAAAGTGTTCGGAAACATC 58.523 33.333 0.00 0.00 46.58 3.06
2084 11129 7.436970 GGTTTTATTGAAAGTGTTCGGAAACAT 59.563 33.333 0.00 0.00 46.58 2.71
2085 11130 6.752815 GGTTTTATTGAAAGTGTTCGGAAACA 59.247 34.615 0.00 0.00 43.06 2.83
2086 11131 6.199531 GGGTTTTATTGAAAGTGTTCGGAAAC 59.800 38.462 0.00 0.00 36.46 2.78
2087 11132 6.097129 AGGGTTTTATTGAAAGTGTTCGGAAA 59.903 34.615 0.00 0.00 36.46 3.13
2088 11133 5.595133 AGGGTTTTATTGAAAGTGTTCGGAA 59.405 36.000 0.00 0.00 36.46 4.30
2089 11134 5.134661 AGGGTTTTATTGAAAGTGTTCGGA 58.865 37.500 0.00 0.00 36.46 4.55
2090 11135 5.240844 AGAGGGTTTTATTGAAAGTGTTCGG 59.759 40.000 0.00 0.00 36.46 4.30
2091 11136 6.313744 AGAGGGTTTTATTGAAAGTGTTCG 57.686 37.500 0.00 0.00 36.46 3.95
2092 11137 6.017357 ACGAGAGGGTTTTATTGAAAGTGTTC 60.017 38.462 0.00 0.00 0.00 3.18
2093 11138 5.826208 ACGAGAGGGTTTTATTGAAAGTGTT 59.174 36.000 0.00 0.00 0.00 3.32
2094 11139 5.374071 ACGAGAGGGTTTTATTGAAAGTGT 58.626 37.500 0.00 0.00 0.00 3.55
2095 11140 5.941948 ACGAGAGGGTTTTATTGAAAGTG 57.058 39.130 0.00 0.00 0.00 3.16
2096 11141 7.001099 TCTACGAGAGGGTTTTATTGAAAGT 57.999 36.000 0.00 0.00 0.00 2.66
2097 11142 7.603024 ACTTCTACGAGAGGGTTTTATTGAAAG 59.397 37.037 0.00 0.00 0.00 2.62
2098 11143 7.447594 ACTTCTACGAGAGGGTTTTATTGAAA 58.552 34.615 0.00 0.00 0.00 2.69
2099 11144 7.001099 ACTTCTACGAGAGGGTTTTATTGAA 57.999 36.000 0.00 0.00 0.00 2.69
2100 11145 6.600882 ACTTCTACGAGAGGGTTTTATTGA 57.399 37.500 0.00 0.00 0.00 2.57
2101 11146 8.943909 AATACTTCTACGAGAGGGTTTTATTG 57.056 34.615 0.00 0.00 0.00 1.90
2102 11147 9.955102 AAAATACTTCTACGAGAGGGTTTTATT 57.045 29.630 0.00 0.00 28.99 1.40
2105 11150 9.212641 GTTAAAATACTTCTACGAGAGGGTTTT 57.787 33.333 0.00 4.12 32.51 2.43
2106 11151 8.370182 TGTTAAAATACTTCTACGAGAGGGTTT 58.630 33.333 0.00 0.00 0.00 3.27
2107 11152 7.899973 TGTTAAAATACTTCTACGAGAGGGTT 58.100 34.615 0.00 0.00 0.00 4.11
2108 11153 7.472334 TGTTAAAATACTTCTACGAGAGGGT 57.528 36.000 0.00 0.00 0.00 4.34
2109 11154 8.818057 CATTGTTAAAATACTTCTACGAGAGGG 58.182 37.037 0.00 0.00 0.00 4.30
2110 11155 9.367444 ACATTGTTAAAATACTTCTACGAGAGG 57.633 33.333 0.00 0.00 0.00 3.69
2147 11192 9.654663 GGAACAGTTCAAGTAGTATCTACAAAT 57.345 33.333 15.36 0.00 0.00 2.32
2148 11193 8.867097 AGGAACAGTTCAAGTAGTATCTACAAA 58.133 33.333 15.36 0.00 0.00 2.83
2149 11194 8.418597 AGGAACAGTTCAAGTAGTATCTACAA 57.581 34.615 15.36 0.00 0.00 2.41
2150 11195 8.418597 AAGGAACAGTTCAAGTAGTATCTACA 57.581 34.615 15.36 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.