Multiple sequence alignment - TraesCS2B01G448800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G448800 | chr2B | 100.000 | 2255 | 0 | 0 | 1 | 2255 | 641858339 | 641860593 | 0.000000e+00 | 4165.0 |
1 | TraesCS2B01G448800 | chr6D | 98.106 | 1109 | 21 | 0 | 562 | 1670 | 389254676 | 389253568 | 0.000000e+00 | 1932.0 |
2 | TraesCS2B01G448800 | chr6D | 97.836 | 1109 | 24 | 0 | 562 | 1670 | 389249881 | 389248773 | 0.000000e+00 | 1916.0 |
3 | TraesCS2B01G448800 | chr6D | 92.925 | 424 | 19 | 5 | 1805 | 2227 | 431006231 | 431005818 | 6.890000e-170 | 606.0 |
4 | TraesCS2B01G448800 | chr6D | 100.000 | 33 | 0 | 0 | 2223 | 2255 | 168246294 | 168246326 | 6.720000e-06 | 62.1 |
5 | TraesCS2B01G448800 | chr5D | 98.106 | 1109 | 20 | 1 | 562 | 1670 | 503238533 | 503237426 | 0.000000e+00 | 1930.0 |
6 | TraesCS2B01G448800 | chr5D | 98.016 | 1109 | 21 | 1 | 562 | 1670 | 503242782 | 503241675 | 0.000000e+00 | 1925.0 |
7 | TraesCS2B01G448800 | chr5D | 97.836 | 1109 | 24 | 0 | 562 | 1670 | 503228755 | 503227647 | 0.000000e+00 | 1916.0 |
8 | TraesCS2B01G448800 | chr5D | 93.632 | 424 | 17 | 5 | 1805 | 2227 | 503254833 | 503254419 | 1.900000e-175 | 625.0 |
9 | TraesCS2B01G448800 | chr5D | 95.862 | 145 | 5 | 1 | 1667 | 1811 | 352066440 | 352066297 | 1.350000e-57 | 233.0 |
10 | TraesCS2B01G448800 | chr5D | 100.000 | 33 | 0 | 0 | 2223 | 2255 | 329125327 | 329125295 | 6.720000e-06 | 62.1 |
11 | TraesCS2B01G448800 | chr5D | 100.000 | 33 | 0 | 0 | 2223 | 2255 | 357552519 | 357552551 | 6.720000e-06 | 62.1 |
12 | TraesCS2B01G448800 | chr3A | 98.016 | 1109 | 22 | 0 | 562 | 1670 | 66007625 | 66008733 | 0.000000e+00 | 1927.0 |
13 | TraesCS2B01G448800 | chr7B | 98.016 | 1109 | 21 | 1 | 562 | 1670 | 663101918 | 663103025 | 0.000000e+00 | 1925.0 |
14 | TraesCS2B01G448800 | chr7B | 97.241 | 145 | 3 | 1 | 1667 | 1811 | 662738084 | 662738227 | 6.220000e-61 | 244.0 |
15 | TraesCS2B01G448800 | chr7B | 96.552 | 145 | 4 | 1 | 1667 | 1811 | 662737004 | 662736861 | 2.890000e-59 | 239.0 |
16 | TraesCS2B01G448800 | chr1D | 97.926 | 1109 | 23 | 0 | 562 | 1670 | 51916750 | 51917858 | 0.000000e+00 | 1921.0 |
17 | TraesCS2B01G448800 | chr1D | 93.412 | 425 | 11 | 7 | 1806 | 2227 | 200552965 | 200552555 | 4.120000e-172 | 614.0 |
18 | TraesCS2B01G448800 | chr1D | 100.000 | 33 | 0 | 0 | 2223 | 2255 | 144237799 | 144237831 | 6.720000e-06 | 62.1 |
19 | TraesCS2B01G448800 | chr3D | 97.926 | 1109 | 22 | 1 | 562 | 1670 | 589266016 | 589267123 | 0.000000e+00 | 1919.0 |
20 | TraesCS2B01G448800 | chr3D | 94.811 | 424 | 12 | 5 | 1805 | 2227 | 158939293 | 158938879 | 0.000000e+00 | 652.0 |
21 | TraesCS2B01G448800 | chr3D | 93.160 | 424 | 19 | 4 | 1805 | 2227 | 589250273 | 589249859 | 4.120000e-172 | 614.0 |
22 | TraesCS2B01G448800 | chr5A | 95.550 | 427 | 8 | 4 | 1805 | 2227 | 482021950 | 482022369 | 0.000000e+00 | 673.0 |
23 | TraesCS2B01G448800 | chr5B | 95.519 | 424 | 9 | 4 | 1805 | 2227 | 429065662 | 429065248 | 0.000000e+00 | 669.0 |
24 | TraesCS2B01G448800 | chr5B | 95.172 | 145 | 6 | 1 | 1667 | 1811 | 432876208 | 432876065 | 6.270000e-56 | 228.0 |
25 | TraesCS2B01G448800 | chrUn | 93.632 | 424 | 17 | 5 | 1805 | 2227 | 341019158 | 341019572 | 1.900000e-175 | 625.0 |
26 | TraesCS2B01G448800 | chrUn | 92.453 | 424 | 16 | 4 | 1805 | 2227 | 362350808 | 362351216 | 1.930000e-165 | 592.0 |
27 | TraesCS2B01G448800 | chrUn | 100.000 | 33 | 0 | 0 | 2223 | 2255 | 93417255 | 93417223 | 6.720000e-06 | 62.1 |
28 | TraesCS2B01G448800 | chrUn | 100.000 | 33 | 0 | 0 | 2223 | 2255 | 97067419 | 97067387 | 6.720000e-06 | 62.1 |
29 | TraesCS2B01G448800 | chrUn | 100.000 | 33 | 0 | 0 | 2223 | 2255 | 278886407 | 278886375 | 6.720000e-06 | 62.1 |
30 | TraesCS2B01G448800 | chrUn | 100.000 | 33 | 0 | 0 | 2223 | 2255 | 327660787 | 327660755 | 6.720000e-06 | 62.1 |
31 | TraesCS2B01G448800 | chr6B | 80.347 | 519 | 68 | 21 | 1 | 501 | 61229244 | 61228742 | 1.650000e-96 | 363.0 |
32 | TraesCS2B01G448800 | chr6B | 95.862 | 145 | 5 | 1 | 1667 | 1811 | 450081475 | 450081618 | 1.350000e-57 | 233.0 |
33 | TraesCS2B01G448800 | chr6B | 95.172 | 145 | 6 | 1 | 1667 | 1811 | 657529951 | 657530094 | 6.270000e-56 | 228.0 |
34 | TraesCS2B01G448800 | chr3B | 96.552 | 145 | 4 | 1 | 1667 | 1811 | 201561290 | 201561433 | 2.890000e-59 | 239.0 |
35 | TraesCS2B01G448800 | chr3B | 83.908 | 87 | 12 | 2 | 205 | 291 | 572847748 | 572847832 | 5.160000e-12 | 82.4 |
36 | TraesCS2B01G448800 | chr2D | 96.552 | 145 | 3 | 2 | 1667 | 1811 | 196964261 | 196964403 | 2.890000e-59 | 239.0 |
37 | TraesCS2B01G448800 | chr1B | 96.552 | 145 | 4 | 1 | 1667 | 1811 | 633729380 | 633729523 | 2.890000e-59 | 239.0 |
38 | TraesCS2B01G448800 | chr4D | 100.000 | 33 | 0 | 0 | 2223 | 2255 | 19923556 | 19923588 | 6.720000e-06 | 62.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G448800 | chr2B | 641858339 | 641860593 | 2254 | False | 4165.0 | 4165 | 100.000 | 1 | 2255 | 1 | chr2B.!!$F1 | 2254 |
1 | TraesCS2B01G448800 | chr6D | 389248773 | 389254676 | 5903 | True | 1924.0 | 1932 | 97.971 | 562 | 1670 | 2 | chr6D.!!$R2 | 1108 |
2 | TraesCS2B01G448800 | chr5D | 503237426 | 503242782 | 5356 | True | 1927.5 | 1930 | 98.061 | 562 | 1670 | 2 | chr5D.!!$R5 | 1108 |
3 | TraesCS2B01G448800 | chr5D | 503227647 | 503228755 | 1108 | True | 1916.0 | 1916 | 97.836 | 562 | 1670 | 1 | chr5D.!!$R3 | 1108 |
4 | TraesCS2B01G448800 | chr3A | 66007625 | 66008733 | 1108 | False | 1927.0 | 1927 | 98.016 | 562 | 1670 | 1 | chr3A.!!$F1 | 1108 |
5 | TraesCS2B01G448800 | chr7B | 663101918 | 663103025 | 1107 | False | 1925.0 | 1925 | 98.016 | 562 | 1670 | 1 | chr7B.!!$F2 | 1108 |
6 | TraesCS2B01G448800 | chr1D | 51916750 | 51917858 | 1108 | False | 1921.0 | 1921 | 97.926 | 562 | 1670 | 1 | chr1D.!!$F1 | 1108 |
7 | TraesCS2B01G448800 | chr3D | 589266016 | 589267123 | 1107 | False | 1919.0 | 1919 | 97.926 | 562 | 1670 | 1 | chr3D.!!$F1 | 1108 |
8 | TraesCS2B01G448800 | chr6B | 61228742 | 61229244 | 502 | True | 363.0 | 363 | 80.347 | 1 | 501 | 1 | chr6B.!!$R1 | 500 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
538 | 541 | 0.118547 | AGGCTACCTAGTTGTGGGGT | 59.881 | 55.0 | 0.0 | 0.0 | 37.16 | 4.95 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1800 | 10880 | 0.239879 | TTTGGTGAATCGGAAAGCGC | 59.76 | 50.0 | 0.0 | 0.0 | 0.0 | 5.92 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
48 | 50 | 9.696917 | GTGACACCATTTCTAAAATTCAAAGAT | 57.303 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
126 | 128 | 9.387123 | GTGAACACTTTTAAAAATTGCAAACAA | 57.613 | 25.926 | 1.71 | 0.00 | 40.87 | 2.83 |
258 | 261 | 9.160496 | ACTTCTGAACAATTTTTAAAATGTGCA | 57.840 | 25.926 | 12.67 | 12.67 | 35.50 | 4.57 |
259 | 262 | 9.985318 | CTTCTGAACAATTTTTAAAATGTGCAA | 57.015 | 25.926 | 13.77 | 3.21 | 37.01 | 4.08 |
279 | 282 | 9.376075 | TGTGCAAACATTTTCTAAAATTCAAGA | 57.624 | 25.926 | 0.00 | 0.00 | 36.52 | 3.02 |
394 | 397 | 7.841915 | AACATTTTCCGAAAACATGAAAAGT | 57.158 | 28.000 | 8.46 | 0.00 | 40.23 | 2.66 |
395 | 398 | 7.841915 | ACATTTTCCGAAAACATGAAAAGTT | 57.158 | 28.000 | 8.46 | 0.00 | 40.23 | 2.66 |
396 | 399 | 8.262715 | ACATTTTCCGAAAACATGAAAAGTTT | 57.737 | 26.923 | 8.46 | 0.00 | 40.23 | 2.66 |
398 | 401 | 9.553418 | CATTTTCCGAAAACATGAAAAGTTTTT | 57.447 | 25.926 | 8.46 | 0.00 | 46.01 | 1.94 |
522 | 525 | 8.183536 | AGAAAAATGAACATTTCAAAAACAGGC | 58.816 | 29.630 | 12.20 | 0.00 | 43.95 | 4.85 |
523 | 526 | 7.628769 | AAAATGAACATTTCAAAAACAGGCT | 57.371 | 28.000 | 12.20 | 0.00 | 43.95 | 4.58 |
524 | 527 | 8.729805 | AAAATGAACATTTCAAAAACAGGCTA | 57.270 | 26.923 | 12.20 | 0.00 | 43.95 | 3.93 |
525 | 528 | 7.713764 | AATGAACATTTCAAAAACAGGCTAC | 57.286 | 32.000 | 0.00 | 0.00 | 43.95 | 3.58 |
526 | 529 | 5.596845 | TGAACATTTCAAAAACAGGCTACC | 58.403 | 37.500 | 0.00 | 0.00 | 36.59 | 3.18 |
527 | 530 | 5.362430 | TGAACATTTCAAAAACAGGCTACCT | 59.638 | 36.000 | 0.00 | 0.00 | 36.59 | 3.08 |
528 | 531 | 6.547880 | TGAACATTTCAAAAACAGGCTACCTA | 59.452 | 34.615 | 0.00 | 0.00 | 36.59 | 3.08 |
529 | 532 | 6.575162 | ACATTTCAAAAACAGGCTACCTAG | 57.425 | 37.500 | 0.00 | 0.00 | 29.64 | 3.02 |
530 | 533 | 6.068670 | ACATTTCAAAAACAGGCTACCTAGT | 58.931 | 36.000 | 0.00 | 0.00 | 29.64 | 2.57 |
531 | 534 | 6.549736 | ACATTTCAAAAACAGGCTACCTAGTT | 59.450 | 34.615 | 0.00 | 0.00 | 29.64 | 2.24 |
532 | 535 | 6.385649 | TTTCAAAAACAGGCTACCTAGTTG | 57.614 | 37.500 | 0.00 | 0.00 | 29.97 | 3.16 |
533 | 536 | 5.043737 | TCAAAAACAGGCTACCTAGTTGT | 57.956 | 39.130 | 0.00 | 0.00 | 29.97 | 3.32 |
534 | 537 | 4.819630 | TCAAAAACAGGCTACCTAGTTGTG | 59.180 | 41.667 | 0.00 | 0.00 | 29.97 | 3.33 |
535 | 538 | 3.418684 | AAACAGGCTACCTAGTTGTGG | 57.581 | 47.619 | 0.00 | 0.00 | 29.97 | 4.17 |
536 | 539 | 1.276622 | ACAGGCTACCTAGTTGTGGG | 58.723 | 55.000 | 0.00 | 0.00 | 29.64 | 4.61 |
537 | 540 | 0.541863 | CAGGCTACCTAGTTGTGGGG | 59.458 | 60.000 | 0.00 | 0.00 | 29.64 | 4.96 |
538 | 541 | 0.118547 | AGGCTACCTAGTTGTGGGGT | 59.881 | 55.000 | 0.00 | 0.00 | 37.16 | 4.95 |
539 | 542 | 1.363629 | AGGCTACCTAGTTGTGGGGTA | 59.636 | 52.381 | 0.00 | 0.00 | 34.86 | 3.69 |
543 | 546 | 1.652947 | ACCTAGTTGTGGGGTAGTGG | 58.347 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
544 | 547 | 0.909623 | CCTAGTTGTGGGGTAGTGGG | 59.090 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
545 | 548 | 0.252197 | CTAGTTGTGGGGTAGTGGGC | 59.748 | 60.000 | 0.00 | 0.00 | 0.00 | 5.36 |
546 | 549 | 0.178885 | TAGTTGTGGGGTAGTGGGCT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
547 | 550 | 1.303317 | GTTGTGGGGTAGTGGGCTG | 60.303 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
548 | 551 | 2.534396 | TTGTGGGGTAGTGGGCTGG | 61.534 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
549 | 552 | 4.426313 | GTGGGGTAGTGGGCTGGC | 62.426 | 72.222 | 0.00 | 0.00 | 0.00 | 4.85 |
560 | 563 | 3.200522 | GGCTGGCCCAAATTCTCG | 58.799 | 61.111 | 0.00 | 0.00 | 0.00 | 4.04 |
639 | 642 | 2.852449 | ACAAGCCTCTTATCCATTCCCA | 59.148 | 45.455 | 0.00 | 0.00 | 0.00 | 4.37 |
703 | 706 | 6.736581 | TCACATTGGGTTTAGGGATAATCAA | 58.263 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
784 | 5036 | 0.753262 | CCCGTCCCATCGAGAAAGAT | 59.247 | 55.000 | 0.00 | 0.00 | 0.00 | 2.40 |
969 | 10016 | 7.312154 | GCACATGGTTTCATAAAATCTGTACA | 58.688 | 34.615 | 0.00 | 0.00 | 31.33 | 2.90 |
1006 | 10053 | 1.089920 | CGAGCAGGTTTCCATGAAGG | 58.910 | 55.000 | 0.00 | 0.00 | 39.47 | 3.46 |
1032 | 10079 | 6.541641 | AGATCTTGTTCAGCATGTTCTATTCC | 59.458 | 38.462 | 0.00 | 0.00 | 37.40 | 3.01 |
1126 | 10173 | 1.302511 | GTCGCCCCTTCTTCTTGCA | 60.303 | 57.895 | 0.00 | 0.00 | 0.00 | 4.08 |
1145 | 10192 | 6.267471 | TCTTGCACCAAAGATCTTACCATTTT | 59.733 | 34.615 | 8.75 | 0.00 | 31.19 | 1.82 |
1155 | 10202 | 6.472887 | AGATCTTACCATTTTCGAAGGAACA | 58.527 | 36.000 | 8.78 | 0.00 | 0.00 | 3.18 |
1369 | 10449 | 5.855045 | ACCGAGACAGAATTTAGAACTTGT | 58.145 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
1471 | 10551 | 2.568062 | TGCATTGCCAGAATCCATGTTT | 59.432 | 40.909 | 6.12 | 0.00 | 0.00 | 2.83 |
1553 | 10633 | 1.215647 | CCTTTCTCCTCGGTCCACG | 59.784 | 63.158 | 0.00 | 0.00 | 46.11 | 4.94 |
1612 | 10692 | 3.385111 | ACGGAAGAAAGAACTCACAGAGT | 59.615 | 43.478 | 0.00 | 0.00 | 45.64 | 3.24 |
1691 | 10771 | 8.798859 | TTCTCTATGATCAGAAAAAGGAAAGG | 57.201 | 34.615 | 0.09 | 0.00 | 0.00 | 3.11 |
1692 | 10772 | 8.150827 | TCTCTATGATCAGAAAAAGGAAAGGA | 57.849 | 34.615 | 0.09 | 0.00 | 0.00 | 3.36 |
1693 | 10773 | 8.043710 | TCTCTATGATCAGAAAAAGGAAAGGAC | 58.956 | 37.037 | 0.09 | 0.00 | 0.00 | 3.85 |
1694 | 10774 | 7.922382 | TCTATGATCAGAAAAAGGAAAGGACT | 58.078 | 34.615 | 0.09 | 0.00 | 0.00 | 3.85 |
1695 | 10775 | 9.046846 | TCTATGATCAGAAAAAGGAAAGGACTA | 57.953 | 33.333 | 0.09 | 0.00 | 0.00 | 2.59 |
1696 | 10776 | 9.844257 | CTATGATCAGAAAAAGGAAAGGACTAT | 57.156 | 33.333 | 0.09 | 0.00 | 0.00 | 2.12 |
1698 | 10778 | 8.940397 | TGATCAGAAAAAGGAAAGGACTATTT | 57.060 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
1699 | 10779 | 9.367160 | TGATCAGAAAAAGGAAAGGACTATTTT | 57.633 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
1700 | 10780 | 9.631452 | GATCAGAAAAAGGAAAGGACTATTTTG | 57.369 | 33.333 | 0.00 | 0.00 | 0.00 | 2.44 |
1701 | 10781 | 8.533569 | TCAGAAAAAGGAAAGGACTATTTTGT | 57.466 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
1702 | 10782 | 8.977412 | TCAGAAAAAGGAAAGGACTATTTTGTT | 58.023 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
1703 | 10783 | 9.249457 | CAGAAAAAGGAAAGGACTATTTTGTTC | 57.751 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
1704 | 10784 | 8.421784 | AGAAAAAGGAAAGGACTATTTTGTTCC | 58.578 | 33.333 | 0.00 | 0.00 | 35.74 | 3.62 |
1705 | 10785 | 7.914427 | AAAAGGAAAGGACTATTTTGTTCCT | 57.086 | 32.000 | 0.00 | 0.00 | 45.25 | 3.36 |
1706 | 10786 | 9.429109 | AAAAAGGAAAGGACTATTTTGTTCCTA | 57.571 | 29.630 | 3.33 | 0.00 | 43.12 | 2.94 |
1707 | 10787 | 8.637196 | AAAGGAAAGGACTATTTTGTTCCTAG | 57.363 | 34.615 | 3.33 | 0.00 | 43.12 | 3.02 |
1708 | 10788 | 6.181190 | AGGAAAGGACTATTTTGTTCCTAGC | 58.819 | 40.000 | 0.95 | 0.00 | 42.33 | 3.42 |
1709 | 10789 | 5.357314 | GGAAAGGACTATTTTGTTCCTAGCC | 59.643 | 44.000 | 0.00 | 0.00 | 33.28 | 3.93 |
1710 | 10790 | 4.505324 | AGGACTATTTTGTTCCTAGCCC | 57.495 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
1711 | 10791 | 3.202373 | AGGACTATTTTGTTCCTAGCCCC | 59.798 | 47.826 | 0.00 | 0.00 | 0.00 | 5.80 |
1712 | 10792 | 3.202373 | GGACTATTTTGTTCCTAGCCCCT | 59.798 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
1713 | 10793 | 4.200092 | GACTATTTTGTTCCTAGCCCCTG | 58.800 | 47.826 | 0.00 | 0.00 | 0.00 | 4.45 |
1714 | 10794 | 2.532250 | ATTTTGTTCCTAGCCCCTGG | 57.468 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
1715 | 10795 | 0.407918 | TTTTGTTCCTAGCCCCTGGG | 59.592 | 55.000 | 5.50 | 5.50 | 33.15 | 4.45 |
1725 | 10805 | 3.793060 | CCCCTGGGGCGTAGATAG | 58.207 | 66.667 | 21.20 | 0.00 | 35.35 | 2.08 |
1726 | 10806 | 1.155390 | CCCCTGGGGCGTAGATAGA | 59.845 | 63.158 | 21.20 | 0.00 | 35.35 | 1.98 |
1727 | 10807 | 0.471211 | CCCCTGGGGCGTAGATAGAA | 60.471 | 60.000 | 21.20 | 0.00 | 35.35 | 2.10 |
1728 | 10808 | 1.645710 | CCCTGGGGCGTAGATAGAAT | 58.354 | 55.000 | 4.27 | 0.00 | 0.00 | 2.40 |
1729 | 10809 | 1.978580 | CCCTGGGGCGTAGATAGAATT | 59.021 | 52.381 | 4.27 | 0.00 | 0.00 | 2.17 |
1730 | 10810 | 3.170717 | CCCTGGGGCGTAGATAGAATTA | 58.829 | 50.000 | 4.27 | 0.00 | 0.00 | 1.40 |
1731 | 10811 | 3.195825 | CCCTGGGGCGTAGATAGAATTAG | 59.804 | 52.174 | 4.27 | 0.00 | 0.00 | 1.73 |
1732 | 10812 | 4.087182 | CCTGGGGCGTAGATAGAATTAGA | 58.913 | 47.826 | 0.00 | 0.00 | 0.00 | 2.10 |
1733 | 10813 | 4.712337 | CCTGGGGCGTAGATAGAATTAGAT | 59.288 | 45.833 | 0.00 | 0.00 | 0.00 | 1.98 |
1734 | 10814 | 5.892119 | CCTGGGGCGTAGATAGAATTAGATA | 59.108 | 44.000 | 0.00 | 0.00 | 0.00 | 1.98 |
1735 | 10815 | 6.380274 | CCTGGGGCGTAGATAGAATTAGATAA | 59.620 | 42.308 | 0.00 | 0.00 | 0.00 | 1.75 |
1736 | 10816 | 7.093465 | CCTGGGGCGTAGATAGAATTAGATAAA | 60.093 | 40.741 | 0.00 | 0.00 | 0.00 | 1.40 |
1737 | 10817 | 8.197592 | TGGGGCGTAGATAGAATTAGATAAAA | 57.802 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
1738 | 10818 | 8.822805 | TGGGGCGTAGATAGAATTAGATAAAAT | 58.177 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
1768 | 10848 | 7.646548 | AGATTTGAAAGGCCTAAATTAGACC | 57.353 | 36.000 | 5.16 | 0.00 | 0.00 | 3.85 |
1769 | 10849 | 7.182060 | AGATTTGAAAGGCCTAAATTAGACCA | 58.818 | 34.615 | 5.16 | 0.00 | 29.63 | 4.02 |
1770 | 10850 | 7.673926 | AGATTTGAAAGGCCTAAATTAGACCAA | 59.326 | 33.333 | 5.16 | 0.00 | 29.63 | 3.67 |
1771 | 10851 | 7.604657 | TTTGAAAGGCCTAAATTAGACCAAA | 57.395 | 32.000 | 5.16 | 0.94 | 29.63 | 3.28 |
1772 | 10852 | 6.834168 | TGAAAGGCCTAAATTAGACCAAAG | 57.166 | 37.500 | 5.16 | 0.00 | 29.63 | 2.77 |
1773 | 10853 | 6.311735 | TGAAAGGCCTAAATTAGACCAAAGT | 58.688 | 36.000 | 5.16 | 0.00 | 29.63 | 2.66 |
1774 | 10854 | 7.463431 | TGAAAGGCCTAAATTAGACCAAAGTA | 58.537 | 34.615 | 5.16 | 0.00 | 29.63 | 2.24 |
1775 | 10855 | 7.945664 | TGAAAGGCCTAAATTAGACCAAAGTAA | 59.054 | 33.333 | 5.16 | 0.00 | 29.63 | 2.24 |
1776 | 10856 | 8.895141 | AAAGGCCTAAATTAGACCAAAGTAAT | 57.105 | 30.769 | 5.16 | 0.00 | 29.63 | 1.89 |
1777 | 10857 | 8.895141 | AAGGCCTAAATTAGACCAAAGTAATT | 57.105 | 30.769 | 5.16 | 0.00 | 29.63 | 1.40 |
1778 | 10858 | 8.521170 | AGGCCTAAATTAGACCAAAGTAATTC | 57.479 | 34.615 | 1.29 | 0.00 | 29.63 | 2.17 |
1779 | 10859 | 7.560262 | AGGCCTAAATTAGACCAAAGTAATTCC | 59.440 | 37.037 | 1.29 | 0.00 | 29.63 | 3.01 |
1780 | 10860 | 7.415229 | GCCTAAATTAGACCAAAGTAATTCCG | 58.585 | 38.462 | 0.83 | 0.00 | 30.22 | 4.30 |
1781 | 10861 | 7.066645 | GCCTAAATTAGACCAAAGTAATTCCGT | 59.933 | 37.037 | 0.83 | 0.00 | 30.22 | 4.69 |
1782 | 10862 | 8.610035 | CCTAAATTAGACCAAAGTAATTCCGTC | 58.390 | 37.037 | 0.83 | 0.00 | 30.22 | 4.79 |
1783 | 10863 | 9.379791 | CTAAATTAGACCAAAGTAATTCCGTCT | 57.620 | 33.333 | 9.09 | 9.09 | 33.98 | 4.18 |
1784 | 10864 | 7.611213 | AATTAGACCAAAGTAATTCCGTCTG | 57.389 | 36.000 | 12.55 | 0.00 | 32.52 | 3.51 |
1785 | 10865 | 3.335579 | AGACCAAAGTAATTCCGTCTGC | 58.664 | 45.455 | 4.58 | 0.00 | 30.21 | 4.26 |
1786 | 10866 | 3.008049 | AGACCAAAGTAATTCCGTCTGCT | 59.992 | 43.478 | 4.58 | 0.00 | 30.21 | 4.24 |
1787 | 10867 | 4.222145 | AGACCAAAGTAATTCCGTCTGCTA | 59.778 | 41.667 | 4.58 | 0.00 | 30.21 | 3.49 |
1788 | 10868 | 4.504858 | ACCAAAGTAATTCCGTCTGCTAG | 58.495 | 43.478 | 0.00 | 0.00 | 0.00 | 3.42 |
1789 | 10869 | 4.222145 | ACCAAAGTAATTCCGTCTGCTAGA | 59.778 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
1790 | 10870 | 5.175859 | CCAAAGTAATTCCGTCTGCTAGAA | 58.824 | 41.667 | 0.00 | 0.00 | 0.00 | 2.10 |
1791 | 10871 | 5.817816 | CCAAAGTAATTCCGTCTGCTAGAAT | 59.182 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
1792 | 10872 | 6.984474 | CCAAAGTAATTCCGTCTGCTAGAATA | 59.016 | 38.462 | 0.00 | 0.00 | 30.21 | 1.75 |
1793 | 10873 | 7.494625 | CCAAAGTAATTCCGTCTGCTAGAATAA | 59.505 | 37.037 | 0.00 | 0.00 | 30.21 | 1.40 |
1794 | 10874 | 8.543774 | CAAAGTAATTCCGTCTGCTAGAATAAG | 58.456 | 37.037 | 0.00 | 0.00 | 30.21 | 1.73 |
1795 | 10875 | 7.584122 | AGTAATTCCGTCTGCTAGAATAAGA | 57.416 | 36.000 | 0.00 | 0.00 | 30.21 | 2.10 |
1796 | 10876 | 8.008513 | AGTAATTCCGTCTGCTAGAATAAGAA | 57.991 | 34.615 | 0.00 | 0.00 | 30.21 | 2.52 |
1797 | 10877 | 8.475639 | AGTAATTCCGTCTGCTAGAATAAGAAA | 58.524 | 33.333 | 0.00 | 0.00 | 30.21 | 2.52 |
1798 | 10878 | 9.095065 | GTAATTCCGTCTGCTAGAATAAGAAAA | 57.905 | 33.333 | 0.00 | 0.00 | 30.21 | 2.29 |
1799 | 10879 | 8.561738 | AATTCCGTCTGCTAGAATAAGAAAAA | 57.438 | 30.769 | 0.00 | 0.00 | 30.21 | 1.94 |
1800 | 10880 | 7.596749 | TTCCGTCTGCTAGAATAAGAAAAAG | 57.403 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
1801 | 10881 | 5.581085 | TCCGTCTGCTAGAATAAGAAAAAGC | 59.419 | 40.000 | 0.00 | 0.00 | 0.00 | 3.51 |
1802 | 10882 | 5.484958 | CGTCTGCTAGAATAAGAAAAAGCG | 58.515 | 41.667 | 0.00 | 0.00 | 32.67 | 4.68 |
1803 | 10883 | 5.259380 | GTCTGCTAGAATAAGAAAAAGCGC | 58.741 | 41.667 | 0.00 | 0.00 | 32.67 | 5.92 |
1804 | 10884 | 5.064071 | GTCTGCTAGAATAAGAAAAAGCGCT | 59.936 | 40.000 | 2.64 | 2.64 | 32.67 | 5.92 |
1805 | 10885 | 5.643777 | TCTGCTAGAATAAGAAAAAGCGCTT | 59.356 | 36.000 | 18.98 | 18.98 | 32.67 | 4.68 |
1806 | 10886 | 6.149474 | TCTGCTAGAATAAGAAAAAGCGCTTT | 59.851 | 34.615 | 29.11 | 29.11 | 32.67 | 3.51 |
1807 | 10887 | 6.314784 | TGCTAGAATAAGAAAAAGCGCTTTC | 58.685 | 36.000 | 33.69 | 23.05 | 35.85 | 2.62 |
1808 | 10888 | 5.739630 | GCTAGAATAAGAAAAAGCGCTTTCC | 59.260 | 40.000 | 33.69 | 26.35 | 36.18 | 3.13 |
1809 | 10889 | 4.723248 | AGAATAAGAAAAAGCGCTTTCCG | 58.277 | 39.130 | 33.69 | 0.00 | 36.18 | 4.30 |
1810 | 10890 | 4.454504 | AGAATAAGAAAAAGCGCTTTCCGA | 59.545 | 37.500 | 33.69 | 20.60 | 40.02 | 4.55 |
1811 | 10891 | 4.965119 | ATAAGAAAAAGCGCTTTCCGAT | 57.035 | 36.364 | 33.69 | 22.04 | 40.02 | 4.18 |
1813 | 10893 | 3.203161 | AGAAAAAGCGCTTTCCGATTC | 57.797 | 42.857 | 33.69 | 29.46 | 46.01 | 2.52 |
1814 | 10894 | 2.552315 | AGAAAAAGCGCTTTCCGATTCA | 59.448 | 40.909 | 33.69 | 0.00 | 46.01 | 2.57 |
1815 | 10895 | 2.331809 | AAAAGCGCTTTCCGATTCAC | 57.668 | 45.000 | 33.69 | 0.00 | 46.01 | 3.18 |
1816 | 10896 | 0.521735 | AAAGCGCTTTCCGATTCACC | 59.478 | 50.000 | 29.11 | 0.00 | 46.01 | 4.02 |
1817 | 10897 | 0.605319 | AAGCGCTTTCCGATTCACCA | 60.605 | 50.000 | 18.98 | 0.00 | 42.72 | 4.17 |
1818 | 10898 | 0.605319 | AGCGCTTTCCGATTCACCAA | 60.605 | 50.000 | 2.64 | 0.00 | 40.02 | 3.67 |
1819 | 10899 | 0.239879 | GCGCTTTCCGATTCACCAAA | 59.760 | 50.000 | 0.00 | 0.00 | 40.02 | 3.28 |
1820 | 10900 | 1.963747 | CGCTTTCCGATTCACCAAAC | 58.036 | 50.000 | 0.00 | 0.00 | 40.02 | 2.93 |
1821 | 10901 | 1.401018 | CGCTTTCCGATTCACCAAACC | 60.401 | 52.381 | 0.00 | 0.00 | 40.02 | 3.27 |
1822 | 10902 | 1.611491 | GCTTTCCGATTCACCAAACCA | 59.389 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
1823 | 10903 | 2.035321 | GCTTTCCGATTCACCAAACCAA | 59.965 | 45.455 | 0.00 | 0.00 | 0.00 | 3.67 |
1824 | 10904 | 3.306019 | GCTTTCCGATTCACCAAACCAAT | 60.306 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
1825 | 10905 | 4.799255 | GCTTTCCGATTCACCAAACCAATT | 60.799 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
1826 | 10906 | 4.513198 | TTCCGATTCACCAAACCAATTC | 57.487 | 40.909 | 0.00 | 0.00 | 0.00 | 2.17 |
1827 | 10907 | 3.761897 | TCCGATTCACCAAACCAATTCT | 58.238 | 40.909 | 0.00 | 0.00 | 0.00 | 2.40 |
1828 | 10908 | 4.148838 | TCCGATTCACCAAACCAATTCTT | 58.851 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
1829 | 10909 | 5.317808 | TCCGATTCACCAAACCAATTCTTA | 58.682 | 37.500 | 0.00 | 0.00 | 0.00 | 2.10 |
1830 | 10910 | 5.949354 | TCCGATTCACCAAACCAATTCTTAT | 59.051 | 36.000 | 0.00 | 0.00 | 0.00 | 1.73 |
1831 | 10911 | 6.094881 | TCCGATTCACCAAACCAATTCTTATC | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
1832 | 10912 | 6.095440 | CCGATTCACCAAACCAATTCTTATCT | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
1833 | 10913 | 7.189512 | CGATTCACCAAACCAATTCTTATCTC | 58.810 | 38.462 | 0.00 | 0.00 | 0.00 | 2.75 |
1834 | 10914 | 7.066284 | CGATTCACCAAACCAATTCTTATCTCT | 59.934 | 37.037 | 0.00 | 0.00 | 0.00 | 3.10 |
1835 | 10915 | 8.655935 | ATTCACCAAACCAATTCTTATCTCTT | 57.344 | 30.769 | 0.00 | 0.00 | 0.00 | 2.85 |
1836 | 10916 | 8.477419 | TTCACCAAACCAATTCTTATCTCTTT | 57.523 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
1837 | 10917 | 8.110860 | TCACCAAACCAATTCTTATCTCTTTC | 57.889 | 34.615 | 0.00 | 0.00 | 0.00 | 2.62 |
1838 | 10918 | 7.944554 | TCACCAAACCAATTCTTATCTCTTTCT | 59.055 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
1839 | 10919 | 8.025445 | CACCAAACCAATTCTTATCTCTTTCTG | 58.975 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
1840 | 10920 | 7.944554 | ACCAAACCAATTCTTATCTCTTTCTGA | 59.055 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
1841 | 10921 | 8.796475 | CCAAACCAATTCTTATCTCTTTCTGAA | 58.204 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
1844 | 10924 | 9.799106 | AACCAATTCTTATCTCTTTCTGAAAGA | 57.201 | 29.630 | 26.29 | 26.29 | 44.82 | 2.52 |
1948 | 11028 | 8.485578 | AGAATGGGTTTAGTTGGTTAAATTCA | 57.514 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
1949 | 11029 | 8.929487 | AGAATGGGTTTAGTTGGTTAAATTCAA | 58.071 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
1950 | 11030 | 9.549078 | GAATGGGTTTAGTTGGTTAAATTCAAA | 57.451 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
1951 | 11031 | 9.907229 | AATGGGTTTAGTTGGTTAAATTCAAAA | 57.093 | 25.926 | 0.00 | 0.00 | 0.00 | 2.44 |
1952 | 11032 | 9.907229 | ATGGGTTTAGTTGGTTAAATTCAAAAA | 57.093 | 25.926 | 0.00 | 0.00 | 0.00 | 1.94 |
1953 | 11033 | 9.384764 | TGGGTTTAGTTGGTTAAATTCAAAAAG | 57.615 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
1954 | 11034 | 9.386010 | GGGTTTAGTTGGTTAAATTCAAAAAGT | 57.614 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
1975 | 11055 | 9.783256 | AAAAGTTAATAAAATAACTAGGCAGCG | 57.217 | 29.630 | 0.00 | 0.00 | 43.52 | 5.18 |
1976 | 11056 | 8.726870 | AAGTTAATAAAATAACTAGGCAGCGA | 57.273 | 30.769 | 0.00 | 0.00 | 43.52 | 4.93 |
1977 | 11057 | 8.726870 | AGTTAATAAAATAACTAGGCAGCGAA | 57.273 | 30.769 | 0.00 | 0.00 | 42.73 | 4.70 |
1978 | 11058 | 8.827677 | AGTTAATAAAATAACTAGGCAGCGAAG | 58.172 | 33.333 | 0.00 | 0.00 | 42.73 | 3.79 |
1979 | 11059 | 8.610035 | GTTAATAAAATAACTAGGCAGCGAAGT | 58.390 | 33.333 | 0.00 | 0.00 | 33.84 | 3.01 |
1980 | 11060 | 7.625828 | AATAAAATAACTAGGCAGCGAAGTT | 57.374 | 32.000 | 13.74 | 13.74 | 37.27 | 2.66 |
1981 | 11061 | 8.726870 | AATAAAATAACTAGGCAGCGAAGTTA | 57.273 | 30.769 | 16.44 | 16.44 | 39.36 | 2.24 |
1982 | 11062 | 8.904099 | ATAAAATAACTAGGCAGCGAAGTTAT | 57.096 | 30.769 | 18.64 | 18.64 | 44.38 | 1.89 |
1985 | 11065 | 7.625828 | AATAACTAGGCAGCGAAGTTATTTT | 57.374 | 32.000 | 24.62 | 13.73 | 46.57 | 1.82 |
1986 | 11066 | 8.726870 | AATAACTAGGCAGCGAAGTTATTTTA | 57.273 | 30.769 | 24.62 | 8.32 | 46.57 | 1.52 |
1987 | 11067 | 8.904099 | ATAACTAGGCAGCGAAGTTATTTTAT | 57.096 | 30.769 | 18.64 | 5.52 | 41.41 | 1.40 |
1988 | 11068 | 7.625828 | AACTAGGCAGCGAAGTTATTTTATT | 57.374 | 32.000 | 8.81 | 0.00 | 31.84 | 1.40 |
1989 | 11069 | 8.726870 | AACTAGGCAGCGAAGTTATTTTATTA | 57.273 | 30.769 | 8.81 | 0.00 | 31.84 | 0.98 |
1990 | 11070 | 8.139521 | ACTAGGCAGCGAAGTTATTTTATTAC | 57.860 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
1991 | 11071 | 6.373186 | AGGCAGCGAAGTTATTTTATTACC | 57.627 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
2091 | 11171 | 9.651913 | TTTCTTTAAAACAAAGATGAAACAGCT | 57.348 | 25.926 | 0.62 | 0.00 | 36.30 | 4.24 |
2092 | 11172 | 8.856490 | TCTTTAAAACAAAGATGAAACAGCTC | 57.144 | 30.769 | 0.00 | 0.00 | 31.86 | 4.09 |
2093 | 11173 | 8.686334 | TCTTTAAAACAAAGATGAAACAGCTCT | 58.314 | 29.630 | 0.00 | 0.00 | 31.86 | 4.09 |
2094 | 11174 | 8.856490 | TTTAAAACAAAGATGAAACAGCTCTC | 57.144 | 30.769 | 0.00 | 0.00 | 0.00 | 3.20 |
2095 | 11175 | 6.705863 | AAAACAAAGATGAAACAGCTCTCT | 57.294 | 33.333 | 0.00 | 0.00 | 0.00 | 3.10 |
2096 | 11176 | 6.705863 | AAACAAAGATGAAACAGCTCTCTT | 57.294 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
2097 | 11177 | 5.686159 | ACAAAGATGAAACAGCTCTCTTG | 57.314 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
2098 | 11178 | 5.371526 | ACAAAGATGAAACAGCTCTCTTGA | 58.628 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
2099 | 11179 | 6.002704 | ACAAAGATGAAACAGCTCTCTTGAT | 58.997 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2100 | 11180 | 6.149142 | ACAAAGATGAAACAGCTCTCTTGATC | 59.851 | 38.462 | 0.00 | 0.00 | 0.00 | 2.92 |
2101 | 11181 | 4.768583 | AGATGAAACAGCTCTCTTGATCC | 58.231 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
2102 | 11182 | 4.224594 | AGATGAAACAGCTCTCTTGATCCA | 59.775 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
2103 | 11183 | 3.935315 | TGAAACAGCTCTCTTGATCCAG | 58.065 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
2104 | 11184 | 3.326006 | TGAAACAGCTCTCTTGATCCAGT | 59.674 | 43.478 | 0.00 | 0.00 | 0.00 | 4.00 |
2105 | 11185 | 4.202398 | TGAAACAGCTCTCTTGATCCAGTT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2106 | 11186 | 3.608316 | ACAGCTCTCTTGATCCAGTTC | 57.392 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
2107 | 11187 | 2.235898 | ACAGCTCTCTTGATCCAGTTCC | 59.764 | 50.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2108 | 11188 | 2.235650 | CAGCTCTCTTGATCCAGTTCCA | 59.764 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2109 | 11189 | 3.113824 | AGCTCTCTTGATCCAGTTCCAT | 58.886 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
2110 | 11190 | 4.100653 | CAGCTCTCTTGATCCAGTTCCATA | 59.899 | 45.833 | 0.00 | 0.00 | 0.00 | 2.74 |
2111 | 11191 | 4.718774 | AGCTCTCTTGATCCAGTTCCATAA | 59.281 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
2112 | 11192 | 5.369110 | AGCTCTCTTGATCCAGTTCCATAAT | 59.631 | 40.000 | 0.00 | 0.00 | 0.00 | 1.28 |
2113 | 11193 | 6.060788 | GCTCTCTTGATCCAGTTCCATAATT | 58.939 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2114 | 11194 | 7.071698 | AGCTCTCTTGATCCAGTTCCATAATTA | 59.928 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
2115 | 11195 | 7.716998 | GCTCTCTTGATCCAGTTCCATAATTAA | 59.283 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
2116 | 11196 | 8.964476 | TCTCTTGATCCAGTTCCATAATTAAC | 57.036 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
2117 | 11197 | 8.772250 | TCTCTTGATCCAGTTCCATAATTAACT | 58.228 | 33.333 | 0.00 | 0.00 | 36.38 | 2.24 |
2128 | 11208 | 9.739276 | AGTTCCATAATTAACTGATTGAGTGAA | 57.261 | 29.630 | 0.00 | 0.00 | 34.70 | 3.18 |
2132 | 11212 | 9.956720 | CCATAATTAACTGATTGAGTGAATTCC | 57.043 | 33.333 | 2.23 | 0.00 | 40.55 | 3.01 |
2136 | 11216 | 9.865321 | AATTAACTGATTGAGTGAATTCCAATG | 57.135 | 29.630 | 11.64 | 3.60 | 40.55 | 2.82 |
2137 | 11217 | 8.634335 | TTAACTGATTGAGTGAATTCCAATGA | 57.366 | 30.769 | 11.64 | 4.63 | 34.02 | 2.57 |
2138 | 11218 | 7.528996 | AACTGATTGAGTGAATTCCAATGAA | 57.471 | 32.000 | 11.64 | 0.00 | 34.02 | 2.57 |
2139 | 11219 | 7.528996 | ACTGATTGAGTGAATTCCAATGAAA | 57.471 | 32.000 | 11.64 | 0.00 | 30.93 | 2.69 |
2140 | 11220 | 7.954835 | ACTGATTGAGTGAATTCCAATGAAAA | 58.045 | 30.769 | 11.64 | 0.00 | 30.93 | 2.29 |
2141 | 11221 | 7.869429 | ACTGATTGAGTGAATTCCAATGAAAAC | 59.131 | 33.333 | 11.64 | 0.00 | 30.93 | 2.43 |
2142 | 11222 | 7.153985 | TGATTGAGTGAATTCCAATGAAAACC | 58.846 | 34.615 | 11.64 | 0.49 | 33.32 | 3.27 |
2143 | 11223 | 6.729690 | TTGAGTGAATTCCAATGAAAACCT | 57.270 | 33.333 | 2.27 | 0.00 | 33.32 | 3.50 |
2144 | 11224 | 7.831691 | TTGAGTGAATTCCAATGAAAACCTA | 57.168 | 32.000 | 2.27 | 0.00 | 33.32 | 3.08 |
2145 | 11225 | 8.421249 | TTGAGTGAATTCCAATGAAAACCTAT | 57.579 | 30.769 | 2.27 | 0.00 | 33.32 | 2.57 |
2146 | 11226 | 7.829725 | TGAGTGAATTCCAATGAAAACCTATG | 58.170 | 34.615 | 2.27 | 0.00 | 33.32 | 2.23 |
2147 | 11227 | 7.451255 | TGAGTGAATTCCAATGAAAACCTATGT | 59.549 | 33.333 | 2.27 | 0.00 | 33.32 | 2.29 |
2148 | 11228 | 8.193953 | AGTGAATTCCAATGAAAACCTATGTT | 57.806 | 30.769 | 2.27 | 0.00 | 33.32 | 2.71 |
2149 | 11229 | 8.650490 | AGTGAATTCCAATGAAAACCTATGTTT | 58.350 | 29.630 | 2.27 | 0.00 | 46.50 | 2.83 |
2150 | 11230 | 9.921637 | GTGAATTCCAATGAAAACCTATGTTTA | 57.078 | 29.630 | 2.27 | 0.00 | 43.80 | 2.01 |
2236 | 11316 | 8.521170 | ACCTAAGTTTTAGAATAGCAATTCCC | 57.479 | 34.615 | 0.00 | 0.00 | 42.20 | 3.97 |
2237 | 11317 | 8.113462 | ACCTAAGTTTTAGAATAGCAATTCCCA | 58.887 | 33.333 | 0.00 | 0.00 | 42.20 | 4.37 |
2238 | 11318 | 9.136323 | CCTAAGTTTTAGAATAGCAATTCCCAT | 57.864 | 33.333 | 0.00 | 0.00 | 42.20 | 4.00 |
2241 | 11321 | 8.011844 | AGTTTTAGAATAGCAATTCCCATTCC | 57.988 | 34.615 | 0.00 | 0.00 | 42.20 | 3.01 |
2242 | 11322 | 7.619302 | AGTTTTAGAATAGCAATTCCCATTCCA | 59.381 | 33.333 | 0.00 | 0.00 | 42.20 | 3.53 |
2243 | 11323 | 6.959639 | TTAGAATAGCAATTCCCATTCCAC | 57.040 | 37.500 | 0.00 | 0.00 | 42.20 | 4.02 |
2244 | 11324 | 4.218312 | AGAATAGCAATTCCCATTCCACC | 58.782 | 43.478 | 0.00 | 0.00 | 42.20 | 4.61 |
2245 | 11325 | 2.452600 | TAGCAATTCCCATTCCACCC | 57.547 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
2246 | 11326 | 0.413037 | AGCAATTCCCATTCCACCCA | 59.587 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
2247 | 11327 | 1.203288 | AGCAATTCCCATTCCACCCAA | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 4.12 |
2248 | 11328 | 1.627834 | GCAATTCCCATTCCACCCAAA | 59.372 | 47.619 | 0.00 | 0.00 | 0.00 | 3.28 |
2249 | 11329 | 2.039613 | GCAATTCCCATTCCACCCAAAA | 59.960 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
2250 | 11330 | 3.673902 | CAATTCCCATTCCACCCAAAAC | 58.326 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
2251 | 11331 | 2.785357 | TTCCCATTCCACCCAAAACT | 57.215 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2252 | 11332 | 2.785357 | TCCCATTCCACCCAAAACTT | 57.215 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2253 | 11333 | 3.053359 | TCCCATTCCACCCAAAACTTT | 57.947 | 42.857 | 0.00 | 0.00 | 0.00 | 2.66 |
2254 | 11334 | 4.200447 | TCCCATTCCACCCAAAACTTTA | 57.800 | 40.909 | 0.00 | 0.00 | 0.00 | 1.85 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
15 | 17 | 8.641498 | ATTTTAGAAATGGTGTCACATTCTCT | 57.359 | 30.769 | 16.53 | 10.14 | 40.01 | 3.10 |
98 | 100 | 9.553418 | GTTTGCAATTTTTAAAAGTGTTCACAT | 57.447 | 25.926 | 17.14 | 0.00 | 0.00 | 3.21 |
220 | 223 | 9.772973 | AAATTGTTCAGAAGTTAAAAATACCCC | 57.227 | 29.630 | 0.00 | 0.00 | 0.00 | 4.95 |
368 | 371 | 9.372369 | ACTTTTCATGTTTTCGGAAAATGTTTA | 57.628 | 25.926 | 17.98 | 4.83 | 39.13 | 2.01 |
369 | 372 | 8.262715 | ACTTTTCATGTTTTCGGAAAATGTTT | 57.737 | 26.923 | 17.98 | 2.58 | 39.13 | 2.83 |
370 | 373 | 7.841915 | ACTTTTCATGTTTTCGGAAAATGTT | 57.158 | 28.000 | 17.98 | 4.79 | 39.13 | 2.71 |
371 | 374 | 7.841915 | AACTTTTCATGTTTTCGGAAAATGT | 57.158 | 28.000 | 17.98 | 8.05 | 39.13 | 2.71 |
372 | 375 | 9.553418 | AAAAACTTTTCATGTTTTCGGAAAATG | 57.447 | 25.926 | 17.98 | 13.32 | 43.94 | 2.32 |
496 | 499 | 8.183536 | GCCTGTTTTTGAAATGTTCATTTTTCT | 58.816 | 29.630 | 11.30 | 0.00 | 39.84 | 2.52 |
497 | 500 | 8.183536 | AGCCTGTTTTTGAAATGTTCATTTTTC | 58.816 | 29.630 | 11.30 | 2.94 | 39.84 | 2.29 |
498 | 501 | 8.054152 | AGCCTGTTTTTGAAATGTTCATTTTT | 57.946 | 26.923 | 11.30 | 0.00 | 39.84 | 1.94 |
499 | 502 | 7.628769 | AGCCTGTTTTTGAAATGTTCATTTT | 57.371 | 28.000 | 11.30 | 0.00 | 39.84 | 1.82 |
500 | 503 | 7.226523 | GGTAGCCTGTTTTTGAAATGTTCATTT | 59.773 | 33.333 | 10.04 | 10.04 | 39.84 | 2.32 |
501 | 504 | 6.705825 | GGTAGCCTGTTTTTGAAATGTTCATT | 59.294 | 34.615 | 0.00 | 0.00 | 39.84 | 2.57 |
502 | 505 | 6.041979 | AGGTAGCCTGTTTTTGAAATGTTCAT | 59.958 | 34.615 | 0.00 | 0.00 | 33.85 | 2.57 |
503 | 506 | 5.362430 | AGGTAGCCTGTTTTTGAAATGTTCA | 59.638 | 36.000 | 0.00 | 0.00 | 32.50 | 3.18 |
504 | 507 | 5.842907 | AGGTAGCCTGTTTTTGAAATGTTC | 58.157 | 37.500 | 0.00 | 0.00 | 29.57 | 3.18 |
505 | 508 | 5.869649 | AGGTAGCCTGTTTTTGAAATGTT | 57.130 | 34.783 | 0.00 | 0.00 | 29.57 | 2.71 |
506 | 509 | 6.068670 | ACTAGGTAGCCTGTTTTTGAAATGT | 58.931 | 36.000 | 0.00 | 0.00 | 34.61 | 2.71 |
507 | 510 | 6.575162 | ACTAGGTAGCCTGTTTTTGAAATG | 57.425 | 37.500 | 0.00 | 0.00 | 34.61 | 2.32 |
508 | 511 | 6.549736 | ACAACTAGGTAGCCTGTTTTTGAAAT | 59.450 | 34.615 | 0.00 | 0.00 | 34.61 | 2.17 |
509 | 512 | 5.889289 | ACAACTAGGTAGCCTGTTTTTGAAA | 59.111 | 36.000 | 0.00 | 0.00 | 34.61 | 2.69 |
510 | 513 | 5.298276 | CACAACTAGGTAGCCTGTTTTTGAA | 59.702 | 40.000 | 0.00 | 0.00 | 34.61 | 2.69 |
511 | 514 | 4.819630 | CACAACTAGGTAGCCTGTTTTTGA | 59.180 | 41.667 | 0.00 | 0.00 | 34.61 | 2.69 |
512 | 515 | 4.023193 | CCACAACTAGGTAGCCTGTTTTTG | 60.023 | 45.833 | 0.00 | 0.00 | 34.61 | 2.44 |
513 | 516 | 4.142038 | CCACAACTAGGTAGCCTGTTTTT | 58.858 | 43.478 | 0.00 | 0.00 | 34.61 | 1.94 |
514 | 517 | 3.497942 | CCCACAACTAGGTAGCCTGTTTT | 60.498 | 47.826 | 0.00 | 0.00 | 34.61 | 2.43 |
515 | 518 | 2.039879 | CCCACAACTAGGTAGCCTGTTT | 59.960 | 50.000 | 0.00 | 0.00 | 34.61 | 2.83 |
516 | 519 | 1.628846 | CCCACAACTAGGTAGCCTGTT | 59.371 | 52.381 | 0.00 | 0.00 | 34.61 | 3.16 |
517 | 520 | 1.276622 | CCCACAACTAGGTAGCCTGT | 58.723 | 55.000 | 0.00 | 0.00 | 34.61 | 4.00 |
518 | 521 | 0.541863 | CCCCACAACTAGGTAGCCTG | 59.458 | 60.000 | 0.00 | 0.00 | 34.61 | 4.85 |
519 | 522 | 0.118547 | ACCCCACAACTAGGTAGCCT | 59.881 | 55.000 | 0.00 | 0.00 | 37.71 | 4.58 |
520 | 523 | 1.761198 | CTACCCCACAACTAGGTAGCC | 59.239 | 57.143 | 2.71 | 0.00 | 44.85 | 3.93 |
523 | 526 | 2.560386 | CCCACTACCCCACAACTAGGTA | 60.560 | 54.545 | 0.00 | 0.00 | 35.02 | 3.08 |
524 | 527 | 1.652947 | CCACTACCCCACAACTAGGT | 58.347 | 55.000 | 0.00 | 0.00 | 37.69 | 3.08 |
525 | 528 | 0.909623 | CCCACTACCCCACAACTAGG | 59.090 | 60.000 | 0.00 | 0.00 | 0.00 | 3.02 |
526 | 529 | 0.252197 | GCCCACTACCCCACAACTAG | 59.748 | 60.000 | 0.00 | 0.00 | 0.00 | 2.57 |
527 | 530 | 0.178885 | AGCCCACTACCCCACAACTA | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
528 | 531 | 1.463410 | AGCCCACTACCCCACAACT | 60.463 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
529 | 532 | 1.303317 | CAGCCCACTACCCCACAAC | 60.303 | 63.158 | 0.00 | 0.00 | 0.00 | 3.32 |
530 | 533 | 2.534396 | CCAGCCCACTACCCCACAA | 61.534 | 63.158 | 0.00 | 0.00 | 0.00 | 3.33 |
531 | 534 | 2.933287 | CCAGCCCACTACCCCACA | 60.933 | 66.667 | 0.00 | 0.00 | 0.00 | 4.17 |
532 | 535 | 4.426313 | GCCAGCCCACTACCCCAC | 62.426 | 72.222 | 0.00 | 0.00 | 0.00 | 4.61 |
543 | 546 | 1.250840 | AACGAGAATTTGGGCCAGCC | 61.251 | 55.000 | 6.23 | 0.00 | 0.00 | 4.85 |
544 | 547 | 1.401905 | CTAACGAGAATTTGGGCCAGC | 59.598 | 52.381 | 6.23 | 0.00 | 0.00 | 4.85 |
545 | 548 | 1.401905 | GCTAACGAGAATTTGGGCCAG | 59.598 | 52.381 | 6.23 | 0.00 | 0.00 | 4.85 |
546 | 549 | 1.459450 | GCTAACGAGAATTTGGGCCA | 58.541 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
547 | 550 | 0.738975 | GGCTAACGAGAATTTGGGCC | 59.261 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
548 | 551 | 1.401905 | CAGGCTAACGAGAATTTGGGC | 59.598 | 52.381 | 0.00 | 0.00 | 0.00 | 5.36 |
549 | 552 | 2.017049 | CCAGGCTAACGAGAATTTGGG | 58.983 | 52.381 | 0.00 | 0.00 | 0.00 | 4.12 |
550 | 553 | 2.939103 | CTCCAGGCTAACGAGAATTTGG | 59.061 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
551 | 554 | 3.600388 | ACTCCAGGCTAACGAGAATTTG | 58.400 | 45.455 | 11.20 | 0.00 | 0.00 | 2.32 |
552 | 555 | 3.983044 | ACTCCAGGCTAACGAGAATTT | 57.017 | 42.857 | 11.20 | 0.00 | 0.00 | 1.82 |
553 | 556 | 3.676324 | CGAACTCCAGGCTAACGAGAATT | 60.676 | 47.826 | 11.20 | 0.00 | 0.00 | 2.17 |
554 | 557 | 2.159226 | CGAACTCCAGGCTAACGAGAAT | 60.159 | 50.000 | 11.20 | 1.89 | 0.00 | 2.40 |
555 | 558 | 1.201647 | CGAACTCCAGGCTAACGAGAA | 59.798 | 52.381 | 11.20 | 0.00 | 0.00 | 2.87 |
556 | 559 | 0.809385 | CGAACTCCAGGCTAACGAGA | 59.191 | 55.000 | 11.20 | 0.00 | 0.00 | 4.04 |
557 | 560 | 0.802607 | GCGAACTCCAGGCTAACGAG | 60.803 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
558 | 561 | 1.214589 | GCGAACTCCAGGCTAACGA | 59.785 | 57.895 | 0.00 | 0.00 | 0.00 | 3.85 |
559 | 562 | 1.810030 | GGCGAACTCCAGGCTAACG | 60.810 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
560 | 563 | 1.019805 | GTGGCGAACTCCAGGCTAAC | 61.020 | 60.000 | 0.00 | 0.00 | 36.67 | 2.34 |
703 | 706 | 1.895798 | TGGAAGTCATCAGTTCGAGCT | 59.104 | 47.619 | 0.00 | 0.00 | 33.22 | 4.09 |
747 | 750 | 3.240302 | CGGGGAAGGGATATAACTCAGT | 58.760 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
784 | 5036 | 6.544564 | CCCTTTGCCTTAGGATTCGTTAATTA | 59.455 | 38.462 | 0.69 | 0.00 | 34.56 | 1.40 |
814 | 5066 | 2.979678 | AGGAAGAGTGGCCTTGAGTTTA | 59.020 | 45.455 | 3.32 | 0.00 | 0.00 | 2.01 |
886 | 5138 | 3.136443 | AGGACCAGTTGACACTTGAATCA | 59.864 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
894 | 5146 | 3.587797 | TTCGATAGGACCAGTTGACAC | 57.412 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
1006 | 10053 | 7.254727 | GGAATAGAACATGCTGAACAAGATCTC | 60.255 | 40.741 | 0.00 | 0.00 | 32.27 | 2.75 |
1032 | 10079 | 3.068307 | CGGGTTCTTCTCCTACCAGTATG | 59.932 | 52.174 | 0.00 | 0.00 | 33.51 | 2.39 |
1126 | 10173 | 6.151144 | CCTTCGAAAATGGTAAGATCTTTGGT | 59.849 | 38.462 | 14.36 | 0.00 | 0.00 | 3.67 |
1145 | 10192 | 1.344065 | TGTAGCCCTTGTTCCTTCGA | 58.656 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
1155 | 10202 | 7.161404 | GGAAATTGAAAAGAAATGTAGCCCTT | 58.839 | 34.615 | 0.00 | 0.00 | 0.00 | 3.95 |
1471 | 10551 | 3.013921 | GGTCAACCCGCTTCAAATATGA | 58.986 | 45.455 | 0.00 | 0.00 | 0.00 | 2.15 |
1612 | 10692 | 5.869579 | AGTACTATTAGTTACCGATCCCGA | 58.130 | 41.667 | 0.85 | 0.00 | 38.22 | 5.14 |
1673 | 10753 | 8.940397 | AAATAGTCCTTTCCTTTTTCTGATCA | 57.060 | 30.769 | 0.00 | 0.00 | 0.00 | 2.92 |
1674 | 10754 | 9.631452 | CAAAATAGTCCTTTCCTTTTTCTGATC | 57.369 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
1675 | 10755 | 9.147732 | ACAAAATAGTCCTTTCCTTTTTCTGAT | 57.852 | 29.630 | 0.00 | 0.00 | 0.00 | 2.90 |
1676 | 10756 | 8.533569 | ACAAAATAGTCCTTTCCTTTTTCTGA | 57.466 | 30.769 | 0.00 | 0.00 | 0.00 | 3.27 |
1677 | 10757 | 9.249457 | GAACAAAATAGTCCTTTCCTTTTTCTG | 57.751 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
1678 | 10758 | 8.421784 | GGAACAAAATAGTCCTTTCCTTTTTCT | 58.578 | 33.333 | 0.00 | 0.00 | 31.54 | 2.52 |
1679 | 10759 | 8.421784 | AGGAACAAAATAGTCCTTTCCTTTTTC | 58.578 | 33.333 | 0.00 | 0.00 | 39.91 | 2.29 |
1680 | 10760 | 8.319057 | AGGAACAAAATAGTCCTTTCCTTTTT | 57.681 | 30.769 | 0.00 | 0.00 | 39.91 | 1.94 |
1681 | 10761 | 7.914427 | AGGAACAAAATAGTCCTTTCCTTTT | 57.086 | 32.000 | 0.00 | 0.00 | 39.91 | 2.27 |
1682 | 10762 | 7.176865 | GCTAGGAACAAAATAGTCCTTTCCTTT | 59.823 | 37.037 | 6.03 | 0.00 | 39.91 | 3.11 |
1683 | 10763 | 6.659668 | GCTAGGAACAAAATAGTCCTTTCCTT | 59.340 | 38.462 | 6.03 | 0.00 | 39.91 | 3.36 |
1684 | 10764 | 6.181190 | GCTAGGAACAAAATAGTCCTTTCCT | 58.819 | 40.000 | 6.00 | 6.00 | 44.06 | 3.36 |
1685 | 10765 | 5.357314 | GGCTAGGAACAAAATAGTCCTTTCC | 59.643 | 44.000 | 0.00 | 0.00 | 33.96 | 3.13 |
1686 | 10766 | 5.357314 | GGGCTAGGAACAAAATAGTCCTTTC | 59.643 | 44.000 | 0.00 | 0.00 | 38.12 | 2.62 |
1687 | 10767 | 5.262009 | GGGCTAGGAACAAAATAGTCCTTT | 58.738 | 41.667 | 0.00 | 0.00 | 38.12 | 3.11 |
1688 | 10768 | 4.325109 | GGGGCTAGGAACAAAATAGTCCTT | 60.325 | 45.833 | 2.44 | 0.00 | 40.46 | 3.36 |
1689 | 10769 | 3.202373 | GGGGCTAGGAACAAAATAGTCCT | 59.798 | 47.826 | 2.44 | 0.00 | 40.46 | 3.85 |
1690 | 10770 | 3.202373 | AGGGGCTAGGAACAAAATAGTCC | 59.798 | 47.826 | 0.00 | 0.00 | 40.00 | 3.85 |
1691 | 10771 | 4.200092 | CAGGGGCTAGGAACAAAATAGTC | 58.800 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
1692 | 10772 | 3.053619 | CCAGGGGCTAGGAACAAAATAGT | 60.054 | 47.826 | 0.00 | 0.00 | 0.00 | 2.12 |
1693 | 10773 | 3.555966 | CCAGGGGCTAGGAACAAAATAG | 58.444 | 50.000 | 0.00 | 0.00 | 0.00 | 1.73 |
1694 | 10774 | 2.243736 | CCCAGGGGCTAGGAACAAAATA | 59.756 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1695 | 10775 | 1.007118 | CCCAGGGGCTAGGAACAAAAT | 59.993 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
1696 | 10776 | 0.407918 | CCCAGGGGCTAGGAACAAAA | 59.592 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
1697 | 10777 | 1.506028 | CCCCAGGGGCTAGGAACAAA | 61.506 | 60.000 | 13.35 | 0.00 | 35.35 | 2.83 |
1698 | 10778 | 1.928567 | CCCCAGGGGCTAGGAACAA | 60.929 | 63.158 | 13.35 | 0.00 | 35.35 | 2.83 |
1699 | 10779 | 2.286121 | CCCCAGGGGCTAGGAACA | 60.286 | 66.667 | 13.35 | 0.00 | 35.35 | 3.18 |
1709 | 10789 | 1.645710 | ATTCTATCTACGCCCCAGGG | 58.354 | 55.000 | 0.00 | 0.00 | 38.57 | 4.45 |
1710 | 10790 | 4.087182 | TCTAATTCTATCTACGCCCCAGG | 58.913 | 47.826 | 0.00 | 0.00 | 0.00 | 4.45 |
1711 | 10791 | 5.923733 | ATCTAATTCTATCTACGCCCCAG | 57.076 | 43.478 | 0.00 | 0.00 | 0.00 | 4.45 |
1712 | 10792 | 7.786046 | TTTATCTAATTCTATCTACGCCCCA | 57.214 | 36.000 | 0.00 | 0.00 | 0.00 | 4.96 |
1755 | 10835 | 7.066645 | ACGGAATTACTTTGGTCTAATTTAGGC | 59.933 | 37.037 | 3.66 | 1.47 | 0.00 | 3.93 |
1756 | 10836 | 8.502105 | ACGGAATTACTTTGGTCTAATTTAGG | 57.498 | 34.615 | 3.66 | 0.00 | 0.00 | 2.69 |
1757 | 10837 | 9.379791 | AGACGGAATTACTTTGGTCTAATTTAG | 57.620 | 33.333 | 0.00 | 0.00 | 33.33 | 1.85 |
1758 | 10838 | 9.158233 | CAGACGGAATTACTTTGGTCTAATTTA | 57.842 | 33.333 | 0.00 | 0.00 | 33.73 | 1.40 |
1759 | 10839 | 7.361799 | GCAGACGGAATTACTTTGGTCTAATTT | 60.362 | 37.037 | 0.00 | 0.00 | 33.73 | 1.82 |
1760 | 10840 | 6.093633 | GCAGACGGAATTACTTTGGTCTAATT | 59.906 | 38.462 | 0.00 | 0.00 | 33.73 | 1.40 |
1761 | 10841 | 5.585047 | GCAGACGGAATTACTTTGGTCTAAT | 59.415 | 40.000 | 0.00 | 0.00 | 33.73 | 1.73 |
1762 | 10842 | 4.933400 | GCAGACGGAATTACTTTGGTCTAA | 59.067 | 41.667 | 0.00 | 0.00 | 33.73 | 2.10 |
1763 | 10843 | 4.222145 | AGCAGACGGAATTACTTTGGTCTA | 59.778 | 41.667 | 0.00 | 0.00 | 33.73 | 2.59 |
1764 | 10844 | 3.008049 | AGCAGACGGAATTACTTTGGTCT | 59.992 | 43.478 | 0.00 | 0.00 | 35.28 | 3.85 |
1765 | 10845 | 3.335579 | AGCAGACGGAATTACTTTGGTC | 58.664 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
1766 | 10846 | 3.418684 | AGCAGACGGAATTACTTTGGT | 57.581 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
1767 | 10847 | 4.755411 | TCTAGCAGACGGAATTACTTTGG | 58.245 | 43.478 | 0.00 | 0.00 | 0.00 | 3.28 |
1768 | 10848 | 6.910536 | ATTCTAGCAGACGGAATTACTTTG | 57.089 | 37.500 | 0.00 | 0.00 | 0.00 | 2.77 |
1769 | 10849 | 8.475639 | TCTTATTCTAGCAGACGGAATTACTTT | 58.524 | 33.333 | 0.00 | 0.00 | 32.78 | 2.66 |
1770 | 10850 | 8.008513 | TCTTATTCTAGCAGACGGAATTACTT | 57.991 | 34.615 | 0.00 | 0.00 | 32.78 | 2.24 |
1771 | 10851 | 7.584122 | TCTTATTCTAGCAGACGGAATTACT | 57.416 | 36.000 | 0.00 | 0.00 | 32.78 | 2.24 |
1772 | 10852 | 8.644318 | TTTCTTATTCTAGCAGACGGAATTAC | 57.356 | 34.615 | 0.00 | 0.00 | 32.78 | 1.89 |
1773 | 10853 | 9.661563 | TTTTTCTTATTCTAGCAGACGGAATTA | 57.338 | 29.630 | 0.00 | 0.00 | 32.78 | 1.40 |
1774 | 10854 | 8.561738 | TTTTTCTTATTCTAGCAGACGGAATT | 57.438 | 30.769 | 0.00 | 0.00 | 32.78 | 2.17 |
1775 | 10855 | 7.201652 | GCTTTTTCTTATTCTAGCAGACGGAAT | 60.202 | 37.037 | 0.00 | 0.00 | 34.59 | 3.01 |
1776 | 10856 | 6.092259 | GCTTTTTCTTATTCTAGCAGACGGAA | 59.908 | 38.462 | 0.00 | 0.00 | 0.00 | 4.30 |
1777 | 10857 | 5.581085 | GCTTTTTCTTATTCTAGCAGACGGA | 59.419 | 40.000 | 0.00 | 0.00 | 0.00 | 4.69 |
1778 | 10858 | 5.500931 | CGCTTTTTCTTATTCTAGCAGACGG | 60.501 | 44.000 | 0.00 | 0.00 | 0.00 | 4.79 |
1779 | 10859 | 5.484958 | CGCTTTTTCTTATTCTAGCAGACG | 58.515 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
1780 | 10860 | 5.064071 | AGCGCTTTTTCTTATTCTAGCAGAC | 59.936 | 40.000 | 2.64 | 0.00 | 0.00 | 3.51 |
1781 | 10861 | 5.178797 | AGCGCTTTTTCTTATTCTAGCAGA | 58.821 | 37.500 | 2.64 | 0.00 | 0.00 | 4.26 |
1782 | 10862 | 5.476752 | AGCGCTTTTTCTTATTCTAGCAG | 57.523 | 39.130 | 2.64 | 0.00 | 0.00 | 4.24 |
1783 | 10863 | 5.880054 | AAGCGCTTTTTCTTATTCTAGCA | 57.120 | 34.783 | 18.98 | 0.00 | 0.00 | 3.49 |
1784 | 10864 | 5.739630 | GGAAAGCGCTTTTTCTTATTCTAGC | 59.260 | 40.000 | 34.01 | 17.04 | 37.26 | 3.42 |
1785 | 10865 | 5.960105 | CGGAAAGCGCTTTTTCTTATTCTAG | 59.040 | 40.000 | 34.01 | 14.18 | 37.26 | 2.43 |
1786 | 10866 | 5.640357 | TCGGAAAGCGCTTTTTCTTATTCTA | 59.360 | 36.000 | 34.01 | 10.44 | 37.26 | 2.10 |
1787 | 10867 | 4.454504 | TCGGAAAGCGCTTTTTCTTATTCT | 59.545 | 37.500 | 34.01 | 10.19 | 37.26 | 2.40 |
1788 | 10868 | 4.719040 | TCGGAAAGCGCTTTTTCTTATTC | 58.281 | 39.130 | 34.01 | 19.51 | 37.26 | 1.75 |
1789 | 10869 | 4.759516 | TCGGAAAGCGCTTTTTCTTATT | 57.240 | 36.364 | 34.01 | 11.79 | 37.26 | 1.40 |
1790 | 10870 | 4.965119 | ATCGGAAAGCGCTTTTTCTTAT | 57.035 | 36.364 | 34.01 | 20.09 | 37.26 | 1.73 |
1791 | 10871 | 4.214545 | TGAATCGGAAAGCGCTTTTTCTTA | 59.785 | 37.500 | 34.01 | 18.89 | 37.26 | 2.10 |
1792 | 10872 | 3.004315 | TGAATCGGAAAGCGCTTTTTCTT | 59.996 | 39.130 | 34.01 | 23.59 | 37.26 | 2.52 |
1793 | 10873 | 2.552315 | TGAATCGGAAAGCGCTTTTTCT | 59.448 | 40.909 | 34.01 | 14.63 | 37.26 | 2.52 |
1794 | 10874 | 2.656897 | GTGAATCGGAAAGCGCTTTTTC | 59.343 | 45.455 | 34.01 | 29.78 | 36.55 | 2.29 |
1795 | 10875 | 2.607038 | GGTGAATCGGAAAGCGCTTTTT | 60.607 | 45.455 | 34.01 | 24.32 | 32.11 | 1.94 |
1796 | 10876 | 1.068541 | GGTGAATCGGAAAGCGCTTTT | 60.069 | 47.619 | 34.01 | 19.53 | 32.11 | 2.27 |
1797 | 10877 | 0.521735 | GGTGAATCGGAAAGCGCTTT | 59.478 | 50.000 | 34.16 | 34.16 | 35.14 | 3.51 |
1798 | 10878 | 0.605319 | TGGTGAATCGGAAAGCGCTT | 60.605 | 50.000 | 18.98 | 18.98 | 0.00 | 4.68 |
1799 | 10879 | 0.605319 | TTGGTGAATCGGAAAGCGCT | 60.605 | 50.000 | 2.64 | 2.64 | 0.00 | 5.92 |
1800 | 10880 | 0.239879 | TTTGGTGAATCGGAAAGCGC | 59.760 | 50.000 | 0.00 | 0.00 | 0.00 | 5.92 |
1801 | 10881 | 1.401018 | GGTTTGGTGAATCGGAAAGCG | 60.401 | 52.381 | 0.00 | 0.00 | 0.00 | 4.68 |
1802 | 10882 | 1.611491 | TGGTTTGGTGAATCGGAAAGC | 59.389 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
1803 | 10883 | 4.519540 | ATTGGTTTGGTGAATCGGAAAG | 57.480 | 40.909 | 0.00 | 0.00 | 0.00 | 2.62 |
1804 | 10884 | 4.586841 | AGAATTGGTTTGGTGAATCGGAAA | 59.413 | 37.500 | 0.00 | 0.00 | 0.00 | 3.13 |
1805 | 10885 | 4.148838 | AGAATTGGTTTGGTGAATCGGAA | 58.851 | 39.130 | 0.00 | 0.00 | 0.00 | 4.30 |
1806 | 10886 | 3.761897 | AGAATTGGTTTGGTGAATCGGA | 58.238 | 40.909 | 0.00 | 0.00 | 0.00 | 4.55 |
1807 | 10887 | 4.519540 | AAGAATTGGTTTGGTGAATCGG | 57.480 | 40.909 | 0.00 | 0.00 | 0.00 | 4.18 |
1808 | 10888 | 7.066284 | AGAGATAAGAATTGGTTTGGTGAATCG | 59.934 | 37.037 | 0.00 | 0.00 | 0.00 | 3.34 |
1809 | 10889 | 8.286191 | AGAGATAAGAATTGGTTTGGTGAATC | 57.714 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
1810 | 10890 | 8.655935 | AAGAGATAAGAATTGGTTTGGTGAAT | 57.344 | 30.769 | 0.00 | 0.00 | 0.00 | 2.57 |
1811 | 10891 | 8.477419 | AAAGAGATAAGAATTGGTTTGGTGAA | 57.523 | 30.769 | 0.00 | 0.00 | 0.00 | 3.18 |
1812 | 10892 | 7.944554 | AGAAAGAGATAAGAATTGGTTTGGTGA | 59.055 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
1813 | 10893 | 8.025445 | CAGAAAGAGATAAGAATTGGTTTGGTG | 58.975 | 37.037 | 0.00 | 0.00 | 0.00 | 4.17 |
1814 | 10894 | 7.944554 | TCAGAAAGAGATAAGAATTGGTTTGGT | 59.055 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
1815 | 10895 | 8.340618 | TCAGAAAGAGATAAGAATTGGTTTGG | 57.659 | 34.615 | 0.00 | 0.00 | 0.00 | 3.28 |
1818 | 10898 | 9.799106 | TCTTTCAGAAAGAGATAAGAATTGGTT | 57.201 | 29.630 | 19.96 | 0.00 | 42.31 | 3.67 |
1922 | 11002 | 8.929487 | TGAATTTAACCAACTAAACCCATTCTT | 58.071 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
1923 | 11003 | 8.485578 | TGAATTTAACCAACTAAACCCATTCT | 57.514 | 30.769 | 0.00 | 0.00 | 0.00 | 2.40 |
1924 | 11004 | 9.549078 | TTTGAATTTAACCAACTAAACCCATTC | 57.451 | 29.630 | 0.00 | 0.00 | 0.00 | 2.67 |
1925 | 11005 | 9.907229 | TTTTGAATTTAACCAACTAAACCCATT | 57.093 | 25.926 | 0.00 | 0.00 | 0.00 | 3.16 |
1926 | 11006 | 9.907229 | TTTTTGAATTTAACCAACTAAACCCAT | 57.093 | 25.926 | 0.00 | 0.00 | 0.00 | 4.00 |
1927 | 11007 | 9.384764 | CTTTTTGAATTTAACCAACTAAACCCA | 57.615 | 29.630 | 0.00 | 0.00 | 0.00 | 4.51 |
1928 | 11008 | 9.386010 | ACTTTTTGAATTTAACCAACTAAACCC | 57.614 | 29.630 | 0.00 | 0.00 | 0.00 | 4.11 |
1949 | 11029 | 9.783256 | CGCTGCCTAGTTATTTTATTAACTTTT | 57.217 | 29.630 | 2.54 | 0.00 | 41.47 | 2.27 |
1950 | 11030 | 9.169592 | TCGCTGCCTAGTTATTTTATTAACTTT | 57.830 | 29.630 | 2.54 | 0.00 | 41.47 | 2.66 |
1951 | 11031 | 8.726870 | TCGCTGCCTAGTTATTTTATTAACTT | 57.273 | 30.769 | 2.54 | 0.00 | 41.47 | 2.66 |
1952 | 11032 | 8.726870 | TTCGCTGCCTAGTTATTTTATTAACT | 57.273 | 30.769 | 0.00 | 2.77 | 43.19 | 2.24 |
1953 | 11033 | 8.610035 | ACTTCGCTGCCTAGTTATTTTATTAAC | 58.390 | 33.333 | 0.00 | 0.00 | 33.20 | 2.01 |
1954 | 11034 | 8.726870 | ACTTCGCTGCCTAGTTATTTTATTAA | 57.273 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
1955 | 11035 | 8.726870 | AACTTCGCTGCCTAGTTATTTTATTA | 57.273 | 30.769 | 11.05 | 0.00 | 30.75 | 0.98 |
1956 | 11036 | 7.625828 | AACTTCGCTGCCTAGTTATTTTATT | 57.374 | 32.000 | 11.05 | 0.00 | 30.75 | 1.40 |
1957 | 11037 | 8.904099 | ATAACTTCGCTGCCTAGTTATTTTAT | 57.096 | 30.769 | 19.89 | 7.57 | 40.40 | 1.40 |
1958 | 11038 | 8.726870 | AATAACTTCGCTGCCTAGTTATTTTA | 57.273 | 30.769 | 25.47 | 10.18 | 45.63 | 1.52 |
1959 | 11039 | 7.625828 | AATAACTTCGCTGCCTAGTTATTTT | 57.374 | 32.000 | 25.47 | 15.15 | 45.63 | 1.82 |
1962 | 11042 | 8.904099 | ATAAAATAACTTCGCTGCCTAGTTAT | 57.096 | 30.769 | 19.89 | 19.89 | 43.37 | 1.89 |
1963 | 11043 | 8.726870 | AATAAAATAACTTCGCTGCCTAGTTA | 57.273 | 30.769 | 17.91 | 17.91 | 38.36 | 2.24 |
1964 | 11044 | 7.625828 | AATAAAATAACTTCGCTGCCTAGTT | 57.374 | 32.000 | 15.45 | 15.45 | 36.23 | 2.24 |
1965 | 11045 | 7.226128 | GGTAATAAAATAACTTCGCTGCCTAGT | 59.774 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
1966 | 11046 | 7.441458 | AGGTAATAAAATAACTTCGCTGCCTAG | 59.559 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
1967 | 11047 | 7.277396 | AGGTAATAAAATAACTTCGCTGCCTA | 58.723 | 34.615 | 0.00 | 0.00 | 0.00 | 3.93 |
1968 | 11048 | 6.120220 | AGGTAATAAAATAACTTCGCTGCCT | 58.880 | 36.000 | 0.00 | 0.00 | 0.00 | 4.75 |
1969 | 11049 | 6.373186 | AGGTAATAAAATAACTTCGCTGCC | 57.627 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
1970 | 11050 | 9.946165 | ATTTAGGTAATAAAATAACTTCGCTGC | 57.054 | 29.630 | 0.00 | 0.00 | 36.94 | 5.25 |
2065 | 11145 | 9.651913 | AGCTGTTTCATCTTTGTTTTAAAGAAA | 57.348 | 25.926 | 6.23 | 0.31 | 39.43 | 2.52 |
2066 | 11146 | 9.301153 | GAGCTGTTTCATCTTTGTTTTAAAGAA | 57.699 | 29.630 | 6.23 | 0.00 | 39.43 | 2.52 |
2067 | 11147 | 8.686334 | AGAGCTGTTTCATCTTTGTTTTAAAGA | 58.314 | 29.630 | 0.00 | 4.75 | 40.17 | 2.52 |
2068 | 11148 | 8.862550 | AGAGCTGTTTCATCTTTGTTTTAAAG | 57.137 | 30.769 | 0.00 | 0.00 | 0.00 | 1.85 |
2069 | 11149 | 8.686334 | AGAGAGCTGTTTCATCTTTGTTTTAAA | 58.314 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
2070 | 11150 | 8.225603 | AGAGAGCTGTTTCATCTTTGTTTTAA | 57.774 | 30.769 | 0.00 | 0.00 | 0.00 | 1.52 |
2071 | 11151 | 7.807977 | AGAGAGCTGTTTCATCTTTGTTTTA | 57.192 | 32.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2072 | 11152 | 6.705863 | AGAGAGCTGTTTCATCTTTGTTTT | 57.294 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
2073 | 11153 | 6.319658 | TCAAGAGAGCTGTTTCATCTTTGTTT | 59.680 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
2074 | 11154 | 5.824624 | TCAAGAGAGCTGTTTCATCTTTGTT | 59.175 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2075 | 11155 | 5.371526 | TCAAGAGAGCTGTTTCATCTTTGT | 58.628 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
2076 | 11156 | 5.936686 | TCAAGAGAGCTGTTTCATCTTTG | 57.063 | 39.130 | 0.00 | 0.00 | 0.00 | 2.77 |
2077 | 11157 | 5.647225 | GGATCAAGAGAGCTGTTTCATCTTT | 59.353 | 40.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2078 | 11158 | 5.184711 | GGATCAAGAGAGCTGTTTCATCTT | 58.815 | 41.667 | 0.00 | 0.00 | 0.00 | 2.40 |
2079 | 11159 | 4.224594 | TGGATCAAGAGAGCTGTTTCATCT | 59.775 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
2080 | 11160 | 4.511527 | TGGATCAAGAGAGCTGTTTCATC | 58.488 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
2081 | 11161 | 4.019501 | ACTGGATCAAGAGAGCTGTTTCAT | 60.020 | 41.667 | 3.42 | 0.00 | 0.00 | 2.57 |
2082 | 11162 | 3.326006 | ACTGGATCAAGAGAGCTGTTTCA | 59.674 | 43.478 | 3.42 | 0.00 | 0.00 | 2.69 |
2083 | 11163 | 3.936564 | ACTGGATCAAGAGAGCTGTTTC | 58.063 | 45.455 | 3.42 | 0.00 | 0.00 | 2.78 |
2084 | 11164 | 4.322567 | GAACTGGATCAAGAGAGCTGTTT | 58.677 | 43.478 | 3.42 | 0.00 | 31.26 | 2.83 |
2085 | 11165 | 3.307339 | GGAACTGGATCAAGAGAGCTGTT | 60.307 | 47.826 | 3.42 | 0.00 | 32.75 | 3.16 |
2086 | 11166 | 2.235898 | GGAACTGGATCAAGAGAGCTGT | 59.764 | 50.000 | 3.42 | 0.00 | 0.00 | 4.40 |
2087 | 11167 | 2.235650 | TGGAACTGGATCAAGAGAGCTG | 59.764 | 50.000 | 3.42 | 0.00 | 0.00 | 4.24 |
2088 | 11168 | 2.544721 | TGGAACTGGATCAAGAGAGCT | 58.455 | 47.619 | 3.42 | 0.00 | 0.00 | 4.09 |
2089 | 11169 | 3.557228 | ATGGAACTGGATCAAGAGAGC | 57.443 | 47.619 | 3.42 | 0.00 | 0.00 | 4.09 |
2090 | 11170 | 9.050601 | GTTAATTATGGAACTGGATCAAGAGAG | 57.949 | 37.037 | 3.42 | 0.00 | 0.00 | 3.20 |
2091 | 11171 | 8.772250 | AGTTAATTATGGAACTGGATCAAGAGA | 58.228 | 33.333 | 3.42 | 0.00 | 34.61 | 3.10 |
2092 | 11172 | 8.834465 | CAGTTAATTATGGAACTGGATCAAGAG | 58.166 | 37.037 | 3.42 | 0.00 | 45.76 | 2.85 |
2093 | 11173 | 8.737168 | CAGTTAATTATGGAACTGGATCAAGA | 57.263 | 34.615 | 3.42 | 0.00 | 45.76 | 3.02 |
2102 | 11182 | 9.739276 | TTCACTCAATCAGTTAATTATGGAACT | 57.261 | 29.630 | 0.00 | 0.00 | 36.31 | 3.01 |
2106 | 11186 | 9.956720 | GGAATTCACTCAATCAGTTAATTATGG | 57.043 | 33.333 | 7.93 | 0.00 | 38.51 | 2.74 |
2110 | 11190 | 9.865321 | CATTGGAATTCACTCAATCAGTTAATT | 57.135 | 29.630 | 7.93 | 0.00 | 40.29 | 1.40 |
2111 | 11191 | 9.246670 | TCATTGGAATTCACTCAATCAGTTAAT | 57.753 | 29.630 | 7.93 | 0.00 | 31.29 | 1.40 |
2112 | 11192 | 8.634335 | TCATTGGAATTCACTCAATCAGTTAA | 57.366 | 30.769 | 7.93 | 0.00 | 30.26 | 2.01 |
2113 | 11193 | 8.634335 | TTCATTGGAATTCACTCAATCAGTTA | 57.366 | 30.769 | 7.93 | 0.00 | 30.26 | 2.24 |
2114 | 11194 | 7.528996 | TTCATTGGAATTCACTCAATCAGTT | 57.471 | 32.000 | 7.93 | 0.00 | 30.26 | 3.16 |
2115 | 11195 | 7.528996 | TTTCATTGGAATTCACTCAATCAGT | 57.471 | 32.000 | 7.93 | 0.00 | 31.24 | 3.41 |
2116 | 11196 | 7.330208 | GGTTTTCATTGGAATTCACTCAATCAG | 59.670 | 37.037 | 7.93 | 0.00 | 31.93 | 2.90 |
2117 | 11197 | 7.015487 | AGGTTTTCATTGGAATTCACTCAATCA | 59.985 | 33.333 | 7.93 | 0.00 | 31.93 | 2.57 |
2118 | 11198 | 7.381323 | AGGTTTTCATTGGAATTCACTCAATC | 58.619 | 34.615 | 7.93 | 0.00 | 31.93 | 2.67 |
2119 | 11199 | 7.307131 | AGGTTTTCATTGGAATTCACTCAAT | 57.693 | 32.000 | 7.93 | 5.28 | 31.93 | 2.57 |
2120 | 11200 | 6.729690 | AGGTTTTCATTGGAATTCACTCAA | 57.270 | 33.333 | 7.93 | 2.98 | 31.93 | 3.02 |
2121 | 11201 | 7.451255 | ACATAGGTTTTCATTGGAATTCACTCA | 59.549 | 33.333 | 7.93 | 0.00 | 31.93 | 3.41 |
2122 | 11202 | 7.830739 | ACATAGGTTTTCATTGGAATTCACTC | 58.169 | 34.615 | 7.93 | 0.00 | 31.93 | 3.51 |
2123 | 11203 | 7.781324 | ACATAGGTTTTCATTGGAATTCACT | 57.219 | 32.000 | 7.93 | 0.00 | 31.93 | 3.41 |
2124 | 11204 | 8.831715 | AAACATAGGTTTTCATTGGAATTCAC | 57.168 | 30.769 | 7.93 | 0.00 | 44.63 | 3.18 |
2210 | 11290 | 9.623000 | GGGAATTGCTATTCTAAAACTTAGGTA | 57.377 | 33.333 | 18.26 | 0.00 | 40.07 | 3.08 |
2211 | 11291 | 8.113462 | TGGGAATTGCTATTCTAAAACTTAGGT | 58.887 | 33.333 | 18.26 | 0.00 | 40.07 | 3.08 |
2212 | 11292 | 8.519799 | TGGGAATTGCTATTCTAAAACTTAGG | 57.480 | 34.615 | 18.26 | 0.00 | 40.07 | 2.69 |
2215 | 11295 | 8.478066 | GGAATGGGAATTGCTATTCTAAAACTT | 58.522 | 33.333 | 26.98 | 0.00 | 40.07 | 2.66 |
2216 | 11296 | 7.619302 | TGGAATGGGAATTGCTATTCTAAAACT | 59.381 | 33.333 | 26.98 | 0.00 | 40.07 | 2.66 |
2217 | 11297 | 7.706607 | GTGGAATGGGAATTGCTATTCTAAAAC | 59.293 | 37.037 | 26.98 | 18.68 | 40.07 | 2.43 |
2218 | 11298 | 7.147742 | GGTGGAATGGGAATTGCTATTCTAAAA | 60.148 | 37.037 | 26.98 | 13.36 | 40.07 | 1.52 |
2219 | 11299 | 6.323739 | GGTGGAATGGGAATTGCTATTCTAAA | 59.676 | 38.462 | 26.98 | 15.23 | 40.07 | 1.85 |
2220 | 11300 | 5.833131 | GGTGGAATGGGAATTGCTATTCTAA | 59.167 | 40.000 | 26.98 | 17.12 | 40.07 | 2.10 |
2221 | 11301 | 5.385198 | GGTGGAATGGGAATTGCTATTCTA | 58.615 | 41.667 | 26.98 | 21.74 | 40.07 | 2.10 |
2222 | 11302 | 4.218312 | GGTGGAATGGGAATTGCTATTCT | 58.782 | 43.478 | 26.98 | 2.06 | 40.07 | 2.40 |
2223 | 11303 | 3.321968 | GGGTGGAATGGGAATTGCTATTC | 59.678 | 47.826 | 22.49 | 22.49 | 39.57 | 1.75 |
2224 | 11304 | 3.308401 | GGGTGGAATGGGAATTGCTATT | 58.692 | 45.455 | 8.28 | 8.28 | 0.00 | 1.73 |
2225 | 11305 | 2.247111 | TGGGTGGAATGGGAATTGCTAT | 59.753 | 45.455 | 0.00 | 0.00 | 0.00 | 2.97 |
2226 | 11306 | 1.643286 | TGGGTGGAATGGGAATTGCTA | 59.357 | 47.619 | 0.00 | 0.00 | 0.00 | 3.49 |
2227 | 11307 | 0.413037 | TGGGTGGAATGGGAATTGCT | 59.587 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2228 | 11308 | 1.274712 | TTGGGTGGAATGGGAATTGC | 58.725 | 50.000 | 0.00 | 0.00 | 0.00 | 3.56 |
2229 | 11309 | 3.327464 | AGTTTTGGGTGGAATGGGAATTG | 59.673 | 43.478 | 0.00 | 0.00 | 0.00 | 2.32 |
2230 | 11310 | 3.597182 | AGTTTTGGGTGGAATGGGAATT | 58.403 | 40.909 | 0.00 | 0.00 | 0.00 | 2.17 |
2231 | 11311 | 3.274281 | AGTTTTGGGTGGAATGGGAAT | 57.726 | 42.857 | 0.00 | 0.00 | 0.00 | 3.01 |
2232 | 11312 | 2.785357 | AGTTTTGGGTGGAATGGGAA | 57.215 | 45.000 | 0.00 | 0.00 | 0.00 | 3.97 |
2233 | 11313 | 2.785357 | AAGTTTTGGGTGGAATGGGA | 57.215 | 45.000 | 0.00 | 0.00 | 0.00 | 4.37 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.