Multiple sequence alignment - TraesCS2B01G447800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G447800 chr2B 100.000 3067 0 0 1 3067 640505243 640502177 0.000000e+00 5664
1 TraesCS2B01G447800 chr2B 89.928 417 41 1 78 494 237626566 237626151 1.250000e-148 536
2 TraesCS2B01G447800 chr2B 93.913 115 7 0 1432 1546 640503692 640503578 1.130000e-39 174
3 TraesCS2B01G447800 chr2B 93.913 115 7 0 1552 1666 640503812 640503698 1.130000e-39 174
4 TraesCS2B01G447800 chr2D 93.287 2145 115 16 250 2371 537718740 537716602 0.000000e+00 3136
5 TraesCS2B01G447800 chr2D 90.023 431 42 1 78 508 453605688 453606117 9.610000e-155 556
6 TraesCS2B01G447800 chr2D 89.688 417 41 2 78 494 123211836 123212250 5.820000e-147 531
7 TraesCS2B01G447800 chr2D 88.667 150 14 2 2488 2635 537711559 537711411 2.430000e-41 180
8 TraesCS2B01G447800 chr2D 93.913 115 7 0 1432 1546 537717430 537717316 1.130000e-39 174
9 TraesCS2B01G447800 chr2A 95.257 1729 76 4 551 2273 680110359 680108631 0.000000e+00 2734
10 TraesCS2B01G447800 chr2A 90.370 135 13 0 1532 1666 680109494 680109360 8.740000e-41 178
11 TraesCS2B01G447800 chr2A 88.000 150 15 3 2487 2635 680106346 680106199 1.130000e-39 174
12 TraesCS2B01G447800 chrUn 90.141 426 41 1 78 503 17324520 17324096 1.240000e-153 553
13 TraesCS2B01G447800 chr6D 89.696 427 42 2 78 503 458763493 458763918 7.480000e-151 544
14 TraesCS2B01G447800 chr3D 89.227 427 44 2 78 503 318512371 318512796 1.620000e-147 532
15 TraesCS2B01G447800 chr4B 89.019 428 45 2 78 505 661647165 661646740 2.090000e-146 529
16 TraesCS2B01G447800 chr7A 88.489 417 47 1 78 494 101509334 101509749 1.270000e-138 503


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G447800 chr2B 640502177 640505243 3066 True 2004.000000 5664 95.942 1 3067 3 chr2B.!!$R2 3066
1 TraesCS2B01G447800 chr2D 537716602 537718740 2138 True 1655.000000 3136 93.600 250 2371 2 chr2D.!!$R2 2121
2 TraesCS2B01G447800 chr2A 680106199 680110359 4160 True 1028.666667 2734 91.209 551 2635 3 chr2A.!!$R1 2084

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
236 237 0.251787 GGACTCAATGGTGGCCCTTT 60.252 55.0 0.0 0.0 28.89 3.11 F
1910 1926 0.178964 CCTGGGAAGCCACAAAGGAA 60.179 55.0 0.0 0.0 41.22 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1991 2007 0.252284 TCCTGTCCCTCTCCTTGGTC 60.252 60.0 0.00 0.00 0.00 4.02 R
2929 5026 0.034283 TTAAACGCCCCCATGGTACC 60.034 55.0 11.73 4.43 36.04 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 9.838339 ATGTCTTATGAAAAGGTATAGAGGTTG 57.162 33.333 0.00 0.00 0.00 3.77
72 73 8.822805 TGTCTTATGAAAAGGTATAGAGGTTGT 58.177 33.333 0.00 0.00 0.00 3.32
90 91 9.232473 AGAGGTTGTAAAAGATAACTTGGATTC 57.768 33.333 0.00 0.00 36.39 2.52
91 92 9.232473 GAGGTTGTAAAAGATAACTTGGATTCT 57.768 33.333 0.00 0.00 36.39 2.40
92 93 9.014297 AGGTTGTAAAAGATAACTTGGATTCTG 57.986 33.333 0.00 0.00 36.39 3.02
93 94 8.793592 GGTTGTAAAAGATAACTTGGATTCTGT 58.206 33.333 0.00 0.00 36.39 3.41
94 95 9.827411 GTTGTAAAAGATAACTTGGATTCTGTC 57.173 33.333 0.00 0.00 36.39 3.51
95 96 9.567776 TTGTAAAAGATAACTTGGATTCTGTCA 57.432 29.630 0.00 0.00 36.39 3.58
96 97 9.739276 TGTAAAAGATAACTTGGATTCTGTCAT 57.261 29.630 0.00 0.00 36.39 3.06
99 100 9.918630 AAAAGATAACTTGGATTCTGTCATTTG 57.081 29.630 0.00 0.00 36.39 2.32
100 101 8.641498 AAGATAACTTGGATTCTGTCATTTGT 57.359 30.769 0.00 0.00 34.80 2.83
101 102 8.641498 AGATAACTTGGATTCTGTCATTTGTT 57.359 30.769 0.00 0.00 0.00 2.83
102 103 8.734386 AGATAACTTGGATTCTGTCATTTGTTC 58.266 33.333 0.00 0.00 0.00 3.18
103 104 6.713762 AACTTGGATTCTGTCATTTGTTCA 57.286 33.333 0.00 0.00 0.00 3.18
104 105 6.906157 ACTTGGATTCTGTCATTTGTTCAT 57.094 33.333 0.00 0.00 0.00 2.57
105 106 6.917533 ACTTGGATTCTGTCATTTGTTCATC 58.082 36.000 0.00 0.00 0.00 2.92
106 107 6.491062 ACTTGGATTCTGTCATTTGTTCATCA 59.509 34.615 0.00 0.00 0.00 3.07
107 108 7.177921 ACTTGGATTCTGTCATTTGTTCATCAT 59.822 33.333 0.00 0.00 0.00 2.45
108 109 6.859017 TGGATTCTGTCATTTGTTCATCATG 58.141 36.000 0.00 0.00 0.00 3.07
109 110 6.434965 TGGATTCTGTCATTTGTTCATCATGT 59.565 34.615 0.00 0.00 0.00 3.21
110 111 6.971184 GGATTCTGTCATTTGTTCATCATGTC 59.029 38.462 0.00 0.00 0.00 3.06
111 112 6.880942 TTCTGTCATTTGTTCATCATGTCA 57.119 33.333 0.00 0.00 0.00 3.58
112 113 6.880942 TCTGTCATTTGTTCATCATGTCAA 57.119 33.333 0.00 0.00 0.00 3.18
113 114 6.671190 TCTGTCATTTGTTCATCATGTCAAC 58.329 36.000 0.00 0.00 0.00 3.18
114 115 6.487668 TCTGTCATTTGTTCATCATGTCAACT 59.512 34.615 0.00 0.00 0.00 3.16
115 116 7.661027 TCTGTCATTTGTTCATCATGTCAACTA 59.339 33.333 0.00 0.00 0.00 2.24
116 117 8.339344 TGTCATTTGTTCATCATGTCAACTAT 57.661 30.769 0.00 0.00 0.00 2.12
117 118 8.795513 TGTCATTTGTTCATCATGTCAACTATT 58.204 29.630 0.00 0.00 0.00 1.73
137 138 8.904099 ACTATTATTCTACTGTAACAATGCCC 57.096 34.615 0.00 0.00 0.00 5.36
138 139 8.714906 ACTATTATTCTACTGTAACAATGCCCT 58.285 33.333 0.00 0.00 0.00 5.19
139 140 9.209175 CTATTATTCTACTGTAACAATGCCCTC 57.791 37.037 0.00 0.00 0.00 4.30
140 141 4.901197 TTCTACTGTAACAATGCCCTCA 57.099 40.909 0.00 0.00 0.00 3.86
141 142 4.901197 TCTACTGTAACAATGCCCTCAA 57.099 40.909 0.00 0.00 0.00 3.02
142 143 4.832248 TCTACTGTAACAATGCCCTCAAG 58.168 43.478 0.00 0.00 0.00 3.02
143 144 2.795329 ACTGTAACAATGCCCTCAAGG 58.205 47.619 0.00 0.00 39.47 3.61
144 145 2.108250 ACTGTAACAATGCCCTCAAGGT 59.892 45.455 0.00 0.00 38.26 3.50
145 146 2.489329 CTGTAACAATGCCCTCAAGGTG 59.511 50.000 0.00 0.00 38.26 4.00
146 147 1.818674 GTAACAATGCCCTCAAGGTGG 59.181 52.381 0.00 0.00 38.26 4.61
147 148 0.482446 AACAATGCCCTCAAGGTGGA 59.518 50.000 0.00 0.00 38.26 4.02
148 149 0.482446 ACAATGCCCTCAAGGTGGAA 59.518 50.000 0.00 0.00 38.26 3.53
149 150 1.077663 ACAATGCCCTCAAGGTGGAAT 59.922 47.619 0.00 0.00 38.26 3.01
150 151 2.181975 CAATGCCCTCAAGGTGGAATT 58.818 47.619 0.00 0.00 38.26 2.17
151 152 2.568509 CAATGCCCTCAAGGTGGAATTT 59.431 45.455 0.00 0.00 38.26 1.82
152 153 1.631405 TGCCCTCAAGGTGGAATTTG 58.369 50.000 0.00 0.00 38.26 2.32
153 154 1.146774 TGCCCTCAAGGTGGAATTTGA 59.853 47.619 0.00 0.00 38.26 2.69
154 155 2.247358 GCCCTCAAGGTGGAATTTGAA 58.753 47.619 0.00 0.00 38.26 2.69
155 156 2.232208 GCCCTCAAGGTGGAATTTGAAG 59.768 50.000 0.00 0.00 38.26 3.02
156 157 2.232208 CCCTCAAGGTGGAATTTGAAGC 59.768 50.000 0.00 0.00 33.30 3.86
157 158 3.160269 CCTCAAGGTGGAATTTGAAGCT 58.840 45.455 0.00 0.00 33.30 3.74
158 159 4.335416 CCTCAAGGTGGAATTTGAAGCTA 58.665 43.478 0.00 0.00 33.30 3.32
159 160 4.952335 CCTCAAGGTGGAATTTGAAGCTAT 59.048 41.667 0.00 0.00 33.30 2.97
160 161 5.420104 CCTCAAGGTGGAATTTGAAGCTATT 59.580 40.000 0.00 0.00 33.30 1.73
161 162 6.603201 CCTCAAGGTGGAATTTGAAGCTATTA 59.397 38.462 0.00 0.00 33.30 0.98
162 163 7.122650 CCTCAAGGTGGAATTTGAAGCTATTAA 59.877 37.037 0.00 0.00 33.30 1.40
163 164 8.055279 TCAAGGTGGAATTTGAAGCTATTAAG 57.945 34.615 0.00 0.00 30.84 1.85
164 165 7.888021 TCAAGGTGGAATTTGAAGCTATTAAGA 59.112 33.333 0.00 0.00 30.84 2.10
165 166 8.689972 CAAGGTGGAATTTGAAGCTATTAAGAT 58.310 33.333 0.00 0.00 0.00 2.40
166 167 8.829373 AGGTGGAATTTGAAGCTATTAAGATT 57.171 30.769 0.00 0.00 32.95 2.40
167 168 8.689972 AGGTGGAATTTGAAGCTATTAAGATTG 58.310 33.333 0.00 0.00 29.60 2.67
168 169 8.686334 GGTGGAATTTGAAGCTATTAAGATTGA 58.314 33.333 0.00 0.00 29.60 2.57
180 181 9.007901 AGCTATTAAGATTGAAATGTCTATGGC 57.992 33.333 0.00 0.00 0.00 4.40
181 182 9.007901 GCTATTAAGATTGAAATGTCTATGGCT 57.992 33.333 0.00 0.00 0.00 4.75
185 186 7.664082 AAGATTGAAATGTCTATGGCTATCG 57.336 36.000 0.00 0.00 0.00 2.92
186 187 6.997655 AGATTGAAATGTCTATGGCTATCGA 58.002 36.000 0.00 0.00 0.00 3.59
187 188 7.445121 AGATTGAAATGTCTATGGCTATCGAA 58.555 34.615 0.00 0.00 0.00 3.71
188 189 8.099537 AGATTGAAATGTCTATGGCTATCGAAT 58.900 33.333 0.00 0.00 0.00 3.34
189 190 7.425577 TTGAAATGTCTATGGCTATCGAATG 57.574 36.000 0.00 0.00 0.00 2.67
190 191 5.934043 TGAAATGTCTATGGCTATCGAATGG 59.066 40.000 0.00 0.00 0.00 3.16
191 192 5.489792 AATGTCTATGGCTATCGAATGGT 57.510 39.130 0.00 0.00 0.00 3.55
192 193 4.521130 TGTCTATGGCTATCGAATGGTC 57.479 45.455 0.00 0.00 0.00 4.02
193 194 4.152647 TGTCTATGGCTATCGAATGGTCT 58.847 43.478 0.00 0.00 0.00 3.85
194 195 5.321927 TGTCTATGGCTATCGAATGGTCTA 58.678 41.667 0.00 0.00 0.00 2.59
195 196 5.773176 TGTCTATGGCTATCGAATGGTCTAA 59.227 40.000 0.00 0.00 0.00 2.10
196 197 6.094061 GTCTATGGCTATCGAATGGTCTAAC 58.906 44.000 0.00 0.00 0.00 2.34
197 198 3.746045 TGGCTATCGAATGGTCTAACC 57.254 47.619 0.00 0.00 39.22 2.85
198 199 3.305720 TGGCTATCGAATGGTCTAACCT 58.694 45.455 0.00 0.00 39.58 3.50
199 200 3.709653 TGGCTATCGAATGGTCTAACCTT 59.290 43.478 0.00 0.00 39.58 3.50
200 201 4.202223 TGGCTATCGAATGGTCTAACCTTC 60.202 45.833 0.00 0.00 39.58 3.46
201 202 4.308265 GCTATCGAATGGTCTAACCTTCC 58.692 47.826 0.00 0.00 39.58 3.46
202 203 2.953466 TCGAATGGTCTAACCTTCCG 57.047 50.000 0.00 0.00 39.58 4.30
203 204 1.479323 TCGAATGGTCTAACCTTCCGG 59.521 52.381 0.00 0.00 39.58 5.14
205 206 2.737679 CGAATGGTCTAACCTTCCGGTC 60.738 54.545 0.00 0.00 44.73 4.79
206 207 2.249309 ATGGTCTAACCTTCCGGTCT 57.751 50.000 0.00 0.00 44.73 3.85
207 208 2.019807 TGGTCTAACCTTCCGGTCTT 57.980 50.000 0.00 0.00 44.73 3.01
208 209 1.897802 TGGTCTAACCTTCCGGTCTTC 59.102 52.381 0.00 0.00 44.73 2.87
209 210 1.135170 GGTCTAACCTTCCGGTCTTCG 60.135 57.143 0.00 0.00 44.73 3.79
210 211 1.543358 GTCTAACCTTCCGGTCTTCGT 59.457 52.381 0.00 0.00 44.73 3.85
211 212 2.749621 GTCTAACCTTCCGGTCTTCGTA 59.250 50.000 0.00 0.00 44.73 3.43
212 213 2.749621 TCTAACCTTCCGGTCTTCGTAC 59.250 50.000 0.00 0.00 44.73 3.67
213 214 1.331214 AACCTTCCGGTCTTCGTACA 58.669 50.000 0.00 0.00 44.73 2.90
214 215 1.331214 ACCTTCCGGTCTTCGTACAA 58.669 50.000 0.00 0.00 40.27 2.41
215 216 1.897802 ACCTTCCGGTCTTCGTACAAT 59.102 47.619 0.00 0.00 40.27 2.71
216 217 2.094338 ACCTTCCGGTCTTCGTACAATC 60.094 50.000 0.00 0.00 40.27 2.67
217 218 2.182825 CTTCCGGTCTTCGTACAATCG 58.817 52.381 0.00 0.00 37.11 3.34
218 219 0.452987 TCCGGTCTTCGTACAATCGG 59.547 55.000 0.00 0.00 37.11 4.18
219 220 0.452987 CCGGTCTTCGTACAATCGGA 59.547 55.000 0.00 0.00 38.42 4.55
220 221 1.542544 CGGTCTTCGTACAATCGGAC 58.457 55.000 0.00 0.00 0.00 4.79
221 222 1.131883 CGGTCTTCGTACAATCGGACT 59.868 52.381 0.00 0.00 0.00 3.85
222 223 2.790468 CGGTCTTCGTACAATCGGACTC 60.790 54.545 0.00 0.00 0.00 3.36
223 224 2.163010 GGTCTTCGTACAATCGGACTCA 59.837 50.000 0.00 0.00 0.00 3.41
224 225 3.366679 GGTCTTCGTACAATCGGACTCAA 60.367 47.826 0.00 0.00 0.00 3.02
225 226 4.421948 GTCTTCGTACAATCGGACTCAAT 58.578 43.478 0.00 0.00 0.00 2.57
226 227 4.265556 GTCTTCGTACAATCGGACTCAATG 59.734 45.833 0.00 0.00 0.00 2.82
227 228 3.159353 TCGTACAATCGGACTCAATGG 57.841 47.619 0.00 0.00 0.00 3.16
228 229 2.494471 TCGTACAATCGGACTCAATGGT 59.506 45.455 0.00 0.00 0.00 3.55
229 230 2.603110 CGTACAATCGGACTCAATGGTG 59.397 50.000 0.00 0.00 0.00 4.17
230 231 2.113860 ACAATCGGACTCAATGGTGG 57.886 50.000 0.00 0.00 0.00 4.61
231 232 0.734889 CAATCGGACTCAATGGTGGC 59.265 55.000 0.00 0.00 0.00 5.01
232 233 0.394352 AATCGGACTCAATGGTGGCC 60.394 55.000 0.00 0.00 32.07 5.36
233 234 2.270874 ATCGGACTCAATGGTGGCCC 62.271 60.000 0.00 0.00 31.67 5.80
234 235 2.971598 CGGACTCAATGGTGGCCCT 61.972 63.158 0.00 0.00 31.67 5.19
235 236 1.384191 GGACTCAATGGTGGCCCTT 59.616 57.895 0.00 0.00 28.89 3.95
236 237 0.251787 GGACTCAATGGTGGCCCTTT 60.252 55.000 0.00 0.00 28.89 3.11
237 238 1.632589 GACTCAATGGTGGCCCTTTT 58.367 50.000 0.00 0.00 0.00 2.27
238 239 1.970640 GACTCAATGGTGGCCCTTTTT 59.029 47.619 0.00 0.00 0.00 1.94
269 270 6.363065 ACTGATGCCTCACTTGATAAATCAT 58.637 36.000 0.00 0.00 36.56 2.45
275 276 7.289310 TGCCTCACTTGATAAATCATCCAATA 58.711 34.615 0.00 0.00 36.56 1.90
303 304 1.407989 GGCCAGGGAGATCAAGAACTG 60.408 57.143 0.00 0.00 0.00 3.16
308 309 2.575279 AGGGAGATCAAGAACTGCATGT 59.425 45.455 0.00 0.00 0.00 3.21
326 327 4.616835 GCATGTTGCAGAGGGAGTTTAAAG 60.617 45.833 0.00 0.00 44.26 1.85
336 337 4.390264 AGGGAGTTTAAAGCAGTGAAGAC 58.610 43.478 0.00 0.00 0.00 3.01
338 339 4.390264 GGAGTTTAAAGCAGTGAAGACCT 58.610 43.478 0.00 0.00 0.00 3.85
342 343 5.529060 AGTTTAAAGCAGTGAAGACCTTGAG 59.471 40.000 0.00 0.00 0.00 3.02
349 350 4.635223 CAGTGAAGACCTTGAGATCACAA 58.365 43.478 5.44 5.44 42.12 3.33
352 353 6.206243 CAGTGAAGACCTTGAGATCACAAAAT 59.794 38.462 7.02 0.00 42.12 1.82
354 355 8.105829 AGTGAAGACCTTGAGATCACAAAATAT 58.894 33.333 7.02 0.00 42.12 1.28
358 359 7.177878 AGACCTTGAGATCACAAAATATGGTT 58.822 34.615 12.71 4.01 0.00 3.67
377 378 6.403866 TGGTTTCACATTGTCTTGCTAATT 57.596 33.333 0.00 0.00 0.00 1.40
383 384 5.067674 TCACATTGTCTTGCTAATTATGCCC 59.932 40.000 0.00 0.00 0.00 5.36
399 400 2.621763 CCCGAATGGCTCATAGCAC 58.378 57.895 0.78 0.00 44.75 4.40
419 420 1.140804 GCTTGTTGGTTGCAACGGT 59.859 52.632 22.67 0.00 37.86 4.83
424 425 1.077357 TTGGTTGCAACGGTCACCT 60.077 52.632 22.67 0.00 0.00 4.00
426 427 1.227853 GGTTGCAACGGTCACCTCT 60.228 57.895 22.67 0.00 0.00 3.69
434 435 3.403038 CAACGGTCACCTCTCTTCATTT 58.597 45.455 0.00 0.00 0.00 2.32
468 469 8.684520 TGTATTAGAAGACTCTAAGCCTGTTAC 58.315 37.037 1.52 0.00 45.25 2.50
472 473 7.778185 AGAAGACTCTAAGCCTGTTACTTTA 57.222 36.000 0.00 0.00 0.00 1.85
516 517 9.705290 AACCTGAATAAAATACATTCCACAAAC 57.295 29.630 0.00 0.00 32.46 2.93
578 580 2.985896 TGAGCTCGTTTTAGGATTGGG 58.014 47.619 9.64 0.00 0.00 4.12
718 727 2.240279 GTATGGCCATAGAGACGGTCT 58.760 52.381 26.09 11.09 39.59 3.85
724 733 3.215975 GCCATAGAGACGGTCTAGAACT 58.784 50.000 11.27 6.48 41.28 3.01
833 842 1.975407 CCCCGTACGTGTCACCTCT 60.975 63.158 15.21 0.00 0.00 3.69
840 849 2.883828 CGTGTCACCTCTGCCCCTT 61.884 63.158 0.00 0.00 0.00 3.95
901 910 1.123928 ATCCTCTCCCTTACCGCAAG 58.876 55.000 0.00 0.00 0.00 4.01
971 983 1.131126 CAAGATTTCGCCGCATTGACT 59.869 47.619 0.00 0.00 0.00 3.41
1029 1041 2.043652 ATGGCCGCCATGCTTCTT 60.044 55.556 24.52 0.00 43.39 2.52
1094 1106 3.873781 CCGTGAAGGCCATTCCTAA 57.126 52.632 5.01 0.00 46.94 2.69
1147 1159 1.919600 GAACTGGAGCCCCATCTGCT 61.920 60.000 0.00 0.00 42.59 4.24
1180 1192 1.596260 CGAGATCGTCGCAGGTAAGTA 59.404 52.381 2.41 0.00 43.03 2.24
1183 1195 4.666149 CGAGATCGTCGCAGGTAAGTATAC 60.666 50.000 0.00 0.00 43.03 1.47
1216 1232 3.647649 CTCGTCTGCCATGCCACGA 62.648 63.158 9.21 9.21 39.40 4.35
1226 1242 2.733227 GCCATGCCACGATTTTTCTCTG 60.733 50.000 0.00 0.00 0.00 3.35
1417 1433 4.452733 GGCCGACGAGACCAAGGG 62.453 72.222 0.00 0.00 0.00 3.95
1526 1542 2.150051 GGCGGGGGAGATGAAGGAT 61.150 63.158 0.00 0.00 0.00 3.24
1847 1863 3.240134 GAGCAAGGTGGCCGAGACA 62.240 63.158 0.00 0.00 0.00 3.41
1910 1926 0.178964 CCTGGGAAGCCACAAAGGAA 60.179 55.000 0.00 0.00 41.22 3.36
2106 2122 0.456142 TGACATCTGCACGCGTCTAC 60.456 55.000 9.86 1.91 0.00 2.59
2205 2224 1.606601 CGATGCCTCCCCCGAGATA 60.607 63.158 0.00 0.00 38.52 1.98
2219 2238 4.154195 CCCCGAGATAAAAATATTGGAGCG 59.846 45.833 0.00 0.00 0.00 5.03
2223 2242 6.591834 CCGAGATAAAAATATTGGAGCGATCT 59.408 38.462 0.00 0.00 0.00 2.75
2262 2285 4.494350 TTCTTTTGAGCTCTGCAATGTC 57.506 40.909 16.19 0.00 0.00 3.06
2264 2287 3.750130 TCTTTTGAGCTCTGCAATGTCTC 59.250 43.478 16.19 0.00 0.00 3.36
2267 2290 1.206610 TGAGCTCTGCAATGTCTCCTC 59.793 52.381 16.19 0.00 0.00 3.71
2276 2333 3.773667 TGCAATGTCTCCTCTCTCTGATT 59.226 43.478 0.00 0.00 0.00 2.57
2287 2344 5.443185 CTCTCTCTGATTGAGGATGTCTC 57.557 47.826 0.00 0.00 42.86 3.36
2334 2391 2.416747 TGTCTTTGGAACTCTGCGATG 58.583 47.619 0.00 0.00 0.00 3.84
2371 2459 9.051679 TCTTCAGTTTTATCTCATCGACAAAAA 57.948 29.630 0.00 0.00 0.00 1.94
2372 2460 9.831737 CTTCAGTTTTATCTCATCGACAAAAAT 57.168 29.630 0.00 0.00 0.00 1.82
2386 2474 9.521179 CATCGACAAAAATTATGTATCATCTCG 57.479 33.333 0.00 0.00 0.00 4.04
2387 2475 7.564128 TCGACAAAAATTATGTATCATCTCGC 58.436 34.615 0.00 0.00 0.00 5.03
2388 2476 7.223777 TCGACAAAAATTATGTATCATCTCGCA 59.776 33.333 0.00 0.00 0.00 5.10
2390 2478 9.669353 GACAAAAATTATGTATCATCTCGCAAT 57.331 29.630 0.00 0.00 0.00 3.56
2393 2481 8.939586 AAAATTATGTATCATCTCGCAATTCG 57.060 30.769 0.00 0.00 40.15 3.34
2394 2482 7.658179 AATTATGTATCATCTCGCAATTCGT 57.342 32.000 0.00 0.00 39.67 3.85
2395 2483 4.979564 ATGTATCATCTCGCAATTCGTG 57.020 40.909 0.00 0.00 39.67 4.35
2397 2485 1.586422 ATCATCTCGCAATTCGTGGG 58.414 50.000 0.00 0.00 41.50 4.61
2399 2487 0.652592 CATCTCGCAATTCGTGGGAC 59.347 55.000 0.00 0.00 43.79 4.46
2400 2488 0.806102 ATCTCGCAATTCGTGGGACG 60.806 55.000 0.00 0.00 43.79 4.79
2401 2489 2.433491 TCGCAATTCGTGGGACGG 60.433 61.111 0.00 0.00 43.79 4.79
2402 2490 3.496131 CGCAATTCGTGGGACGGG 61.496 66.667 0.00 0.00 42.81 5.28
2403 2491 2.046700 GCAATTCGTGGGACGGGA 60.047 61.111 0.00 0.00 42.81 5.14
2404 2492 2.106683 GCAATTCGTGGGACGGGAG 61.107 63.158 0.00 0.00 42.81 4.30
2415 4455 1.588082 GACGGGAGCCAGTTCGTAA 59.412 57.895 0.00 0.00 35.91 3.18
2420 4460 0.606604 GGAGCCAGTTCGTAAGGTGA 59.393 55.000 0.00 0.00 38.47 4.02
2447 4487 2.433318 GCGAGCGCTCTTCCAGTT 60.433 61.111 32.88 0.00 38.26 3.16
2451 4532 1.802069 GAGCGCTCTTCCAGTTTTCT 58.198 50.000 29.88 0.00 0.00 2.52
2458 4539 5.277828 GCGCTCTTCCAGTTTTCTTTTCTAA 60.278 40.000 0.00 0.00 0.00 2.10
2460 4541 6.238374 CGCTCTTCCAGTTTTCTTTTCTAACA 60.238 38.462 0.00 0.00 0.00 2.41
2473 4554 7.703058 TCTTTTCTAACAAGATGATTTCCCC 57.297 36.000 0.00 0.00 0.00 4.81
2474 4555 7.237982 TCTTTTCTAACAAGATGATTTCCCCA 58.762 34.615 0.00 0.00 0.00 4.96
2475 4556 6.834168 TTTCTAACAAGATGATTTCCCCAC 57.166 37.500 0.00 0.00 0.00 4.61
2476 4557 5.512942 TCTAACAAGATGATTTCCCCACA 57.487 39.130 0.00 0.00 0.00 4.17
2478 4559 3.524095 ACAAGATGATTTCCCCACACA 57.476 42.857 0.00 0.00 0.00 3.72
2479 4560 3.843422 ACAAGATGATTTCCCCACACAA 58.157 40.909 0.00 0.00 0.00 3.33
2503 4584 4.599047 AAAAATGATTTCCTGTTGCGGA 57.401 36.364 0.00 0.00 0.00 5.54
2504 4585 3.855689 AAATGATTTCCTGTTGCGGAG 57.144 42.857 0.00 0.00 33.89 4.63
2512 4609 2.699954 TCCTGTTGCGGAGAGAATTTC 58.300 47.619 0.00 0.00 0.00 2.17
2514 4611 2.813754 CCTGTTGCGGAGAGAATTTCAA 59.186 45.455 0.00 0.00 0.00 2.69
2635 4732 3.434940 AACCCCAAACTATCAGGTGAC 57.565 47.619 0.00 0.00 0.00 3.67
2636 4733 2.632537 ACCCCAAACTATCAGGTGACT 58.367 47.619 0.00 0.00 46.44 3.41
2637 4734 2.986728 ACCCCAAACTATCAGGTGACTT 59.013 45.455 0.00 0.00 40.21 3.01
2638 4735 3.397955 ACCCCAAACTATCAGGTGACTTT 59.602 43.478 0.00 0.00 40.21 2.66
2639 4736 3.758554 CCCCAAACTATCAGGTGACTTTG 59.241 47.826 0.00 0.00 40.21 2.77
2640 4737 4.506625 CCCCAAACTATCAGGTGACTTTGA 60.507 45.833 7.64 0.00 40.21 2.69
2641 4738 5.070001 CCCAAACTATCAGGTGACTTTGAA 58.930 41.667 7.64 0.00 40.21 2.69
2642 4739 5.534654 CCCAAACTATCAGGTGACTTTGAAA 59.465 40.000 7.64 0.00 40.21 2.69
2643 4740 6.040391 CCCAAACTATCAGGTGACTTTGAAAA 59.960 38.462 7.64 0.00 40.21 2.29
2644 4741 7.417342 CCCAAACTATCAGGTGACTTTGAAAAA 60.417 37.037 7.64 0.00 40.21 1.94
2673 4770 9.829507 AATTTTGTATGTTCCAAAAACATCTGA 57.170 25.926 6.67 0.00 42.95 3.27
2674 4771 9.829507 ATTTTGTATGTTCCAAAAACATCTGAA 57.170 25.926 6.67 0.79 42.95 3.02
2675 4772 9.829507 TTTTGTATGTTCCAAAAACATCTGAAT 57.170 25.926 6.67 0.00 40.87 2.57
2706 4803 6.546428 TGAATGTTCACAAACCCCTAAAAA 57.454 33.333 0.00 0.00 34.28 1.94
2727 4824 7.656707 AAAAATCAGACCCAAATTCGAAATG 57.343 32.000 0.00 4.56 0.00 2.32
2728 4825 3.848272 TCAGACCCAAATTCGAAATGC 57.152 42.857 0.00 0.00 0.00 3.56
2729 4826 3.153130 TCAGACCCAAATTCGAAATGCA 58.847 40.909 0.00 0.00 0.00 3.96
2730 4827 3.057596 TCAGACCCAAATTCGAAATGCAC 60.058 43.478 0.00 0.00 0.00 4.57
2731 4828 2.890311 AGACCCAAATTCGAAATGCACA 59.110 40.909 0.00 0.00 0.00 4.57
2732 4829 3.511146 AGACCCAAATTCGAAATGCACAT 59.489 39.130 0.00 0.00 0.00 3.21
2733 4830 4.021192 AGACCCAAATTCGAAATGCACATT 60.021 37.500 0.00 0.00 0.00 2.71
2734 4831 3.995705 ACCCAAATTCGAAATGCACATTG 59.004 39.130 0.00 0.00 0.00 2.82
2735 4832 4.244066 CCCAAATTCGAAATGCACATTGA 58.756 39.130 0.00 0.00 0.00 2.57
2736 4833 4.327898 CCCAAATTCGAAATGCACATTGAG 59.672 41.667 0.00 0.00 0.00 3.02
2737 4834 5.162794 CCAAATTCGAAATGCACATTGAGA 58.837 37.500 0.00 0.00 0.00 3.27
2738 4835 5.634439 CCAAATTCGAAATGCACATTGAGAA 59.366 36.000 0.00 12.87 34.20 2.87
2739 4836 6.145858 CCAAATTCGAAATGCACATTGAGAAA 59.854 34.615 0.00 2.35 33.76 2.52
2740 4837 7.148540 CCAAATTCGAAATGCACATTGAGAAAT 60.149 33.333 0.00 6.76 33.76 2.17
2741 4838 8.862074 CAAATTCGAAATGCACATTGAGAAATA 58.138 29.630 0.00 0.00 33.76 1.40
2742 4839 8.984891 AATTCGAAATGCACATTGAGAAATAA 57.015 26.923 0.00 0.00 33.76 1.40
2743 4840 8.984891 ATTCGAAATGCACATTGAGAAATAAA 57.015 26.923 0.00 0.00 33.76 1.40
2744 4841 8.809159 TTCGAAATGCACATTGAGAAATAAAA 57.191 26.923 0.00 0.00 30.01 1.52
2745 4842 8.809159 TCGAAATGCACATTGAGAAATAAAAA 57.191 26.923 0.00 0.00 0.00 1.94
2806 4903 5.458041 AAAAATTGACACCTCACATCTGG 57.542 39.130 0.00 0.00 0.00 3.86
2807 4904 4.371624 AAATTGACACCTCACATCTGGA 57.628 40.909 0.00 0.00 0.00 3.86
2808 4905 4.581309 AATTGACACCTCACATCTGGAT 57.419 40.909 0.00 0.00 0.00 3.41
2809 4906 4.581309 ATTGACACCTCACATCTGGATT 57.419 40.909 0.00 0.00 0.00 3.01
2810 4907 3.616956 TGACACCTCACATCTGGATTC 57.383 47.619 0.00 0.00 0.00 2.52
2811 4908 2.905736 TGACACCTCACATCTGGATTCA 59.094 45.455 0.00 0.00 0.00 2.57
2812 4909 3.520721 TGACACCTCACATCTGGATTCAT 59.479 43.478 0.00 0.00 0.00 2.57
2813 4910 4.019051 TGACACCTCACATCTGGATTCATT 60.019 41.667 0.00 0.00 0.00 2.57
2814 4911 4.267536 ACACCTCACATCTGGATTCATTG 58.732 43.478 0.00 0.00 0.00 2.82
2815 4912 4.263639 ACACCTCACATCTGGATTCATTGT 60.264 41.667 0.00 0.00 0.00 2.71
2816 4913 4.703575 CACCTCACATCTGGATTCATTGTT 59.296 41.667 0.00 0.00 0.00 2.83
2817 4914 4.946157 ACCTCACATCTGGATTCATTGTTC 59.054 41.667 0.00 0.00 0.00 3.18
2818 4915 5.191426 CCTCACATCTGGATTCATTGTTCT 58.809 41.667 0.00 0.00 0.00 3.01
2819 4916 6.070021 ACCTCACATCTGGATTCATTGTTCTA 60.070 38.462 0.00 0.00 0.00 2.10
2820 4917 6.259608 CCTCACATCTGGATTCATTGTTCTAC 59.740 42.308 0.00 0.00 0.00 2.59
2821 4918 6.950842 TCACATCTGGATTCATTGTTCTACT 58.049 36.000 0.00 0.00 0.00 2.57
2822 4919 7.397221 TCACATCTGGATTCATTGTTCTACTT 58.603 34.615 0.00 0.00 0.00 2.24
2823 4920 7.884877 TCACATCTGGATTCATTGTTCTACTTT 59.115 33.333 0.00 0.00 0.00 2.66
2824 4921 8.180267 CACATCTGGATTCATTGTTCTACTTTC 58.820 37.037 0.00 0.00 0.00 2.62
2825 4922 8.105829 ACATCTGGATTCATTGTTCTACTTTCT 58.894 33.333 0.00 0.00 0.00 2.52
2826 4923 8.610896 CATCTGGATTCATTGTTCTACTTTCTC 58.389 37.037 0.00 0.00 0.00 2.87
2827 4924 7.679783 TCTGGATTCATTGTTCTACTTTCTCA 58.320 34.615 0.00 0.00 0.00 3.27
2828 4925 8.156820 TCTGGATTCATTGTTCTACTTTCTCAA 58.843 33.333 0.00 0.00 0.00 3.02
2829 4926 8.868522 TGGATTCATTGTTCTACTTTCTCAAT 57.131 30.769 0.00 0.00 0.00 2.57
2830 4927 8.733458 TGGATTCATTGTTCTACTTTCTCAATG 58.267 33.333 9.10 9.10 43.47 2.82
2831 4928 8.734386 GGATTCATTGTTCTACTTTCTCAATGT 58.266 33.333 13.31 0.00 42.99 2.71
2832 4929 9.552114 GATTCATTGTTCTACTTTCTCAATGTG 57.448 33.333 13.31 0.00 42.99 3.21
2833 4930 6.902341 TCATTGTTCTACTTTCTCAATGTGC 58.098 36.000 13.31 0.00 42.99 4.57
2834 4931 6.486320 TCATTGTTCTACTTTCTCAATGTGCA 59.514 34.615 13.31 0.00 42.99 4.57
2835 4932 6.882610 TTGTTCTACTTTCTCAATGTGCAT 57.117 33.333 0.00 0.00 0.00 3.96
2836 4933 6.882610 TGTTCTACTTTCTCAATGTGCATT 57.117 33.333 0.00 0.00 0.00 3.56
2837 4934 7.275888 TGTTCTACTTTCTCAATGTGCATTT 57.724 32.000 0.00 0.00 0.00 2.32
2838 4935 7.362662 TGTTCTACTTTCTCAATGTGCATTTC 58.637 34.615 0.00 0.00 0.00 2.17
2839 4936 7.013178 TGTTCTACTTTCTCAATGTGCATTTCA 59.987 33.333 0.00 0.00 0.00 2.69
2840 4937 7.692460 TCTACTTTCTCAATGTGCATTTCAT 57.308 32.000 0.00 0.00 0.00 2.57
2841 4938 8.791327 TCTACTTTCTCAATGTGCATTTCATA 57.209 30.769 0.00 0.00 0.00 2.15
2842 4939 9.399797 TCTACTTTCTCAATGTGCATTTCATAT 57.600 29.630 0.00 0.00 0.00 1.78
2845 4942 9.362539 ACTTTCTCAATGTGCATTTCATATTTC 57.637 29.630 0.00 0.00 34.78 2.17
2846 4943 9.361315 CTTTCTCAATGTGCATTTCATATTTCA 57.639 29.630 0.00 0.00 34.78 2.69
2847 4944 9.708092 TTTCTCAATGTGCATTTCATATTTCAA 57.292 25.926 0.00 0.00 34.78 2.69
2848 4945 8.920509 TCTCAATGTGCATTTCATATTTCAAG 57.079 30.769 0.00 0.00 34.78 3.02
2849 4946 7.490079 TCTCAATGTGCATTTCATATTTCAAGC 59.510 33.333 0.00 0.00 34.78 4.01
2850 4947 7.324935 TCAATGTGCATTTCATATTTCAAGCT 58.675 30.769 0.00 0.00 34.78 3.74
2851 4948 7.276878 TCAATGTGCATTTCATATTTCAAGCTG 59.723 33.333 0.00 0.00 34.78 4.24
2852 4949 6.270156 TGTGCATTTCATATTTCAAGCTGA 57.730 33.333 0.00 0.00 0.00 4.26
2853 4950 6.689554 TGTGCATTTCATATTTCAAGCTGAA 58.310 32.000 0.00 0.00 34.03 3.02
2864 4961 5.529581 TTTCAAGCTGAAACTTTTAGGGG 57.470 39.130 7.09 0.00 41.02 4.79
2865 4962 4.178956 TCAAGCTGAAACTTTTAGGGGT 57.821 40.909 0.00 0.00 0.00 4.95
2866 4963 4.542697 TCAAGCTGAAACTTTTAGGGGTT 58.457 39.130 0.00 0.00 0.00 4.11
2867 4964 4.340950 TCAAGCTGAAACTTTTAGGGGTTG 59.659 41.667 0.00 0.00 33.74 3.77
2868 4965 3.910989 AGCTGAAACTTTTAGGGGTTGT 58.089 40.909 0.00 0.00 0.00 3.32
2869 4966 5.056553 AGCTGAAACTTTTAGGGGTTGTA 57.943 39.130 0.00 0.00 0.00 2.41
2870 4967 5.070685 AGCTGAAACTTTTAGGGGTTGTAG 58.929 41.667 0.00 0.00 0.00 2.74
2871 4968 5.067954 GCTGAAACTTTTAGGGGTTGTAGA 58.932 41.667 0.00 0.00 0.00 2.59
2872 4969 5.048921 GCTGAAACTTTTAGGGGTTGTAGAC 60.049 44.000 0.00 0.00 0.00 2.59
2873 4970 6.003859 TGAAACTTTTAGGGGTTGTAGACA 57.996 37.500 0.00 0.00 0.00 3.41
2874 4971 5.824097 TGAAACTTTTAGGGGTTGTAGACAC 59.176 40.000 0.00 0.00 0.00 3.67
2875 4972 5.376756 AACTTTTAGGGGTTGTAGACACA 57.623 39.130 0.00 0.00 31.36 3.72
2876 4973 5.578157 ACTTTTAGGGGTTGTAGACACAT 57.422 39.130 0.00 0.00 33.76 3.21
2877 4974 5.948842 ACTTTTAGGGGTTGTAGACACATT 58.051 37.500 0.00 0.00 33.76 2.71
2878 4975 6.370453 ACTTTTAGGGGTTGTAGACACATTT 58.630 36.000 0.00 0.00 33.76 2.32
2879 4976 6.489022 ACTTTTAGGGGTTGTAGACACATTTC 59.511 38.462 0.00 0.00 33.76 2.17
2880 4977 5.836024 TTAGGGGTTGTAGACACATTTCT 57.164 39.130 0.00 0.00 33.76 2.52
2881 4978 4.724279 AGGGGTTGTAGACACATTTCTT 57.276 40.909 0.00 0.00 33.76 2.52
2882 4979 5.836024 AGGGGTTGTAGACACATTTCTTA 57.164 39.130 0.00 0.00 33.76 2.10
2883 4980 6.195600 AGGGGTTGTAGACACATTTCTTAA 57.804 37.500 0.00 0.00 33.76 1.85
2884 4981 6.607019 AGGGGTTGTAGACACATTTCTTAAA 58.393 36.000 0.00 0.00 33.76 1.52
2885 4982 7.064229 AGGGGTTGTAGACACATTTCTTAAAA 58.936 34.615 0.00 0.00 33.76 1.52
2886 4983 7.562088 AGGGGTTGTAGACACATTTCTTAAAAA 59.438 33.333 0.00 0.00 33.76 1.94
2939 5036 4.792521 TTTTTCGAAATGGTACCATGGG 57.207 40.909 28.00 18.72 36.68 4.00
2940 5037 2.428544 TTCGAAATGGTACCATGGGG 57.571 50.000 28.00 18.38 36.68 4.96
2941 5038 0.548989 TCGAAATGGTACCATGGGGG 59.451 55.000 28.00 16.71 44.81 5.40
2942 5039 1.106944 CGAAATGGTACCATGGGGGC 61.107 60.000 28.00 13.86 42.05 5.80
2943 5040 1.076339 AAATGGTACCATGGGGGCG 60.076 57.895 28.00 0.00 42.05 6.13
2944 5041 1.869824 AAATGGTACCATGGGGGCGT 61.870 55.000 28.00 7.69 42.05 5.68
2945 5042 1.869824 AATGGTACCATGGGGGCGTT 61.870 55.000 28.00 7.74 42.05 4.84
2946 5043 1.869824 ATGGTACCATGGGGGCGTTT 61.870 55.000 26.82 0.00 42.05 3.60
2947 5044 1.206135 TGGTACCATGGGGGCGTTTA 61.206 55.000 18.09 0.00 42.05 2.01
2948 5045 0.034283 GGTACCATGGGGGCGTTTAA 60.034 55.000 18.09 0.00 42.05 1.52
2949 5046 1.385528 GTACCATGGGGGCGTTTAAG 58.614 55.000 18.09 0.00 42.05 1.85
2950 5047 0.256464 TACCATGGGGGCGTTTAAGG 59.744 55.000 18.09 0.00 42.05 2.69
2951 5048 1.000145 CCATGGGGGCGTTTAAGGT 60.000 57.895 2.85 0.00 0.00 3.50
2952 5049 1.319614 CCATGGGGGCGTTTAAGGTG 61.320 60.000 2.85 0.00 0.00 4.00
2953 5050 0.610785 CATGGGGGCGTTTAAGGTGT 60.611 55.000 0.00 0.00 0.00 4.16
2954 5051 0.610785 ATGGGGGCGTTTAAGGTGTG 60.611 55.000 0.00 0.00 0.00 3.82
2955 5052 1.974875 GGGGGCGTTTAAGGTGTGG 60.975 63.158 0.00 0.00 0.00 4.17
2956 5053 1.228337 GGGGCGTTTAAGGTGTGGT 60.228 57.895 0.00 0.00 0.00 4.16
2957 5054 0.824595 GGGGCGTTTAAGGTGTGGTT 60.825 55.000 0.00 0.00 0.00 3.67
2958 5055 1.034356 GGGCGTTTAAGGTGTGGTTT 58.966 50.000 0.00 0.00 0.00 3.27
2959 5056 1.001048 GGGCGTTTAAGGTGTGGTTTC 60.001 52.381 0.00 0.00 0.00 2.78
2960 5057 1.677052 GGCGTTTAAGGTGTGGTTTCA 59.323 47.619 0.00 0.00 0.00 2.69
2961 5058 2.542205 GGCGTTTAAGGTGTGGTTTCAC 60.542 50.000 0.00 0.00 43.87 3.18
2962 5059 2.356695 GCGTTTAAGGTGTGGTTTCACT 59.643 45.455 0.00 0.00 43.94 3.41
2963 5060 3.560896 GCGTTTAAGGTGTGGTTTCACTA 59.439 43.478 0.00 0.00 43.94 2.74
2964 5061 4.214758 GCGTTTAAGGTGTGGTTTCACTAT 59.785 41.667 0.00 0.00 43.94 2.12
2965 5062 5.278120 GCGTTTAAGGTGTGGTTTCACTATT 60.278 40.000 0.00 0.00 43.94 1.73
2966 5063 6.368213 CGTTTAAGGTGTGGTTTCACTATTC 58.632 40.000 0.00 0.00 43.94 1.75
2967 5064 6.204108 CGTTTAAGGTGTGGTTTCACTATTCT 59.796 38.462 0.00 0.00 43.94 2.40
2968 5065 7.570691 CGTTTAAGGTGTGGTTTCACTATTCTC 60.571 40.741 0.00 0.00 43.94 2.87
2969 5066 4.287766 AGGTGTGGTTTCACTATTCTCC 57.712 45.455 0.00 0.00 43.94 3.71
2970 5067 3.009143 AGGTGTGGTTTCACTATTCTCCC 59.991 47.826 0.00 0.00 43.94 4.30
2971 5068 3.244770 GGTGTGGTTTCACTATTCTCCCA 60.245 47.826 0.00 0.00 43.94 4.37
2972 5069 4.567747 GGTGTGGTTTCACTATTCTCCCAT 60.568 45.833 0.00 0.00 43.94 4.00
2973 5070 5.010282 GTGTGGTTTCACTATTCTCCCATT 58.990 41.667 0.00 0.00 43.94 3.16
2974 5071 5.476945 GTGTGGTTTCACTATTCTCCCATTT 59.523 40.000 0.00 0.00 43.94 2.32
2975 5072 5.476599 TGTGGTTTCACTATTCTCCCATTTG 59.523 40.000 0.00 0.00 43.94 2.32
2976 5073 5.016173 TGGTTTCACTATTCTCCCATTTGG 58.984 41.667 0.00 0.00 0.00 3.28
2977 5074 5.016831 GGTTTCACTATTCTCCCATTTGGT 58.983 41.667 0.00 0.00 34.77 3.67
2978 5075 5.480422 GGTTTCACTATTCTCCCATTTGGTT 59.520 40.000 0.00 0.00 34.77 3.67
2979 5076 6.014584 GGTTTCACTATTCTCCCATTTGGTTT 60.015 38.462 0.00 0.00 34.77 3.27
2980 5077 6.588719 TTCACTATTCTCCCATTTGGTTTG 57.411 37.500 0.00 0.00 34.77 2.93
2981 5078 4.462483 TCACTATTCTCCCATTTGGTTTGC 59.538 41.667 0.00 0.00 34.77 3.68
2982 5079 4.463891 CACTATTCTCCCATTTGGTTTGCT 59.536 41.667 0.00 0.00 34.77 3.91
2983 5080 5.652014 CACTATTCTCCCATTTGGTTTGCTA 59.348 40.000 0.00 0.00 34.77 3.49
2984 5081 5.888161 ACTATTCTCCCATTTGGTTTGCTAG 59.112 40.000 0.00 0.00 34.77 3.42
2985 5082 3.806949 TCTCCCATTTGGTTTGCTAGT 57.193 42.857 0.00 0.00 34.77 2.57
2986 5083 4.112634 TCTCCCATTTGGTTTGCTAGTT 57.887 40.909 0.00 0.00 34.77 2.24
2987 5084 4.479158 TCTCCCATTTGGTTTGCTAGTTT 58.521 39.130 0.00 0.00 34.77 2.66
2988 5085 4.280677 TCTCCCATTTGGTTTGCTAGTTTG 59.719 41.667 0.00 0.00 34.77 2.93
2989 5086 3.066380 CCCATTTGGTTTGCTAGTTTGC 58.934 45.455 0.00 0.00 0.00 3.68
2990 5087 3.494048 CCCATTTGGTTTGCTAGTTTGCA 60.494 43.478 0.00 0.00 41.65 4.08
2991 5088 4.317488 CCATTTGGTTTGCTAGTTTGCAT 58.683 39.130 0.00 0.00 42.96 3.96
2992 5089 4.152759 CCATTTGGTTTGCTAGTTTGCATG 59.847 41.667 0.00 0.00 42.96 4.06
2993 5090 3.383620 TTGGTTTGCTAGTTTGCATGG 57.616 42.857 0.00 0.00 42.96 3.66
2994 5091 1.617850 TGGTTTGCTAGTTTGCATGGG 59.382 47.619 0.00 0.00 42.96 4.00
2995 5092 1.618343 GGTTTGCTAGTTTGCATGGGT 59.382 47.619 0.00 0.00 42.96 4.51
2996 5093 2.037121 GGTTTGCTAGTTTGCATGGGTT 59.963 45.455 0.00 0.00 42.96 4.11
2997 5094 3.059166 GTTTGCTAGTTTGCATGGGTTG 58.941 45.455 0.00 0.00 42.96 3.77
2998 5095 2.284754 TGCTAGTTTGCATGGGTTGA 57.715 45.000 0.00 0.00 38.12 3.18
2999 5096 2.591923 TGCTAGTTTGCATGGGTTGAA 58.408 42.857 0.00 0.00 38.12 2.69
3000 5097 3.164268 TGCTAGTTTGCATGGGTTGAAT 58.836 40.909 0.00 0.00 38.12 2.57
3001 5098 4.339748 TGCTAGTTTGCATGGGTTGAATA 58.660 39.130 0.00 0.00 38.12 1.75
3002 5099 4.769488 TGCTAGTTTGCATGGGTTGAATAA 59.231 37.500 0.00 0.00 38.12 1.40
3003 5100 5.421693 TGCTAGTTTGCATGGGTTGAATAAT 59.578 36.000 0.00 0.00 38.12 1.28
3004 5101 6.605194 TGCTAGTTTGCATGGGTTGAATAATA 59.395 34.615 0.00 0.00 38.12 0.98
3005 5102 6.918022 GCTAGTTTGCATGGGTTGAATAATAC 59.082 38.462 0.00 0.00 0.00 1.89
3006 5103 7.201821 GCTAGTTTGCATGGGTTGAATAATACT 60.202 37.037 0.00 0.00 0.00 2.12
3007 5104 9.337396 CTAGTTTGCATGGGTTGAATAATACTA 57.663 33.333 0.00 0.00 0.00 1.82
3008 5105 8.766994 AGTTTGCATGGGTTGAATAATACTAT 57.233 30.769 0.00 0.00 0.00 2.12
3009 5106 9.200817 AGTTTGCATGGGTTGAATAATACTATT 57.799 29.630 0.00 0.00 0.00 1.73
3012 5109 9.860650 TTGCATGGGTTGAATAATACTATTAGT 57.139 29.630 1.30 1.30 0.00 2.24
3032 5129 7.972832 TTAGTAAATGTTTACAGTGAGGTGG 57.027 36.000 15.67 0.00 44.14 4.61
3033 5130 6.182507 AGTAAATGTTTACAGTGAGGTGGA 57.817 37.500 15.67 0.00 44.14 4.02
3034 5131 6.597562 AGTAAATGTTTACAGTGAGGTGGAA 58.402 36.000 15.67 0.00 44.14 3.53
3035 5132 6.710744 AGTAAATGTTTACAGTGAGGTGGAAG 59.289 38.462 15.67 0.00 44.14 3.46
3036 5133 4.706842 ATGTTTACAGTGAGGTGGAAGT 57.293 40.909 0.00 0.00 0.00 3.01
3037 5134 3.804036 TGTTTACAGTGAGGTGGAAGTG 58.196 45.455 0.00 0.00 0.00 3.16
3038 5135 3.199071 TGTTTACAGTGAGGTGGAAGTGT 59.801 43.478 0.00 0.00 34.41 3.55
3039 5136 4.196971 GTTTACAGTGAGGTGGAAGTGTT 58.803 43.478 0.00 0.00 32.34 3.32
3040 5137 4.497291 TTACAGTGAGGTGGAAGTGTTT 57.503 40.909 0.00 0.00 32.34 2.83
3041 5138 2.643551 ACAGTGAGGTGGAAGTGTTTG 58.356 47.619 0.00 0.00 0.00 2.93
3042 5139 2.238646 ACAGTGAGGTGGAAGTGTTTGA 59.761 45.455 0.00 0.00 0.00 2.69
3043 5140 2.614057 CAGTGAGGTGGAAGTGTTTGAC 59.386 50.000 0.00 0.00 0.00 3.18
3044 5141 2.238646 AGTGAGGTGGAAGTGTTTGACA 59.761 45.455 0.00 0.00 0.00 3.58
3045 5142 3.117888 AGTGAGGTGGAAGTGTTTGACAT 60.118 43.478 0.00 0.00 0.00 3.06
3046 5143 4.102524 AGTGAGGTGGAAGTGTTTGACATA 59.897 41.667 0.00 0.00 0.00 2.29
3047 5144 4.819630 GTGAGGTGGAAGTGTTTGACATAA 59.180 41.667 0.00 0.00 0.00 1.90
3048 5145 5.473504 GTGAGGTGGAAGTGTTTGACATAAT 59.526 40.000 0.00 0.00 0.00 1.28
3049 5146 6.016276 GTGAGGTGGAAGTGTTTGACATAATT 60.016 38.462 0.00 0.00 0.00 1.40
3050 5147 7.174253 GTGAGGTGGAAGTGTTTGACATAATTA 59.826 37.037 0.00 0.00 0.00 1.40
3051 5148 7.390440 TGAGGTGGAAGTGTTTGACATAATTAG 59.610 37.037 0.00 0.00 0.00 1.73
3052 5149 7.458397 AGGTGGAAGTGTTTGACATAATTAGA 58.542 34.615 0.00 0.00 0.00 2.10
3053 5150 7.607991 AGGTGGAAGTGTTTGACATAATTAGAG 59.392 37.037 0.00 0.00 0.00 2.43
3054 5151 7.148239 GGTGGAAGTGTTTGACATAATTAGAGG 60.148 40.741 0.00 0.00 0.00 3.69
3055 5152 7.390718 GTGGAAGTGTTTGACATAATTAGAGGT 59.609 37.037 0.00 0.00 0.00 3.85
3056 5153 8.598916 TGGAAGTGTTTGACATAATTAGAGGTA 58.401 33.333 0.00 0.00 0.00 3.08
3057 5154 9.099454 GGAAGTGTTTGACATAATTAGAGGTAG 57.901 37.037 0.00 0.00 0.00 3.18
3058 5155 9.654663 GAAGTGTTTGACATAATTAGAGGTAGT 57.345 33.333 0.00 0.00 0.00 2.73
3059 5156 9.436957 AAGTGTTTGACATAATTAGAGGTAGTG 57.563 33.333 0.00 0.00 0.00 2.74
3060 5157 8.812972 AGTGTTTGACATAATTAGAGGTAGTGA 58.187 33.333 0.00 0.00 0.00 3.41
3061 5158 9.088512 GTGTTTGACATAATTAGAGGTAGTGAG 57.911 37.037 0.00 0.00 0.00 3.51
3062 5159 8.258007 TGTTTGACATAATTAGAGGTAGTGAGG 58.742 37.037 0.00 0.00 0.00 3.86
3063 5160 6.978674 TGACATAATTAGAGGTAGTGAGGG 57.021 41.667 0.00 0.00 0.00 4.30
3064 5161 6.441222 TGACATAATTAGAGGTAGTGAGGGT 58.559 40.000 0.00 0.00 0.00 4.34
3065 5162 6.550108 TGACATAATTAGAGGTAGTGAGGGTC 59.450 42.308 0.00 0.00 0.00 4.46
3066 5163 5.839606 ACATAATTAGAGGTAGTGAGGGTCC 59.160 44.000 0.00 0.00 0.00 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 9.838339 CAACCTCTATACCTTTTCATAAGACAT 57.162 33.333 0.00 0.00 0.00 3.06
46 47 8.822805 ACAACCTCTATACCTTTTCATAAGACA 58.177 33.333 0.00 0.00 0.00 3.41
64 65 9.232473 GAATCCAAGTTATCTTTTACAACCTCT 57.768 33.333 0.00 0.00 0.00 3.69
65 66 9.232473 AGAATCCAAGTTATCTTTTACAACCTC 57.768 33.333 0.00 0.00 0.00 3.85
66 67 9.014297 CAGAATCCAAGTTATCTTTTACAACCT 57.986 33.333 0.00 0.00 0.00 3.50
67 68 8.793592 ACAGAATCCAAGTTATCTTTTACAACC 58.206 33.333 0.00 0.00 0.00 3.77
68 69 9.827411 GACAGAATCCAAGTTATCTTTTACAAC 57.173 33.333 0.00 0.00 0.00 3.32
69 70 9.567776 TGACAGAATCCAAGTTATCTTTTACAA 57.432 29.630 0.00 0.00 0.00 2.41
70 71 9.739276 ATGACAGAATCCAAGTTATCTTTTACA 57.261 29.630 0.00 0.00 0.00 2.41
73 74 9.918630 CAAATGACAGAATCCAAGTTATCTTTT 57.081 29.630 0.00 0.00 0.00 2.27
74 75 9.082313 ACAAATGACAGAATCCAAGTTATCTTT 57.918 29.630 0.00 0.00 0.00 2.52
75 76 8.641498 ACAAATGACAGAATCCAAGTTATCTT 57.359 30.769 0.00 0.00 0.00 2.40
76 77 8.641498 AACAAATGACAGAATCCAAGTTATCT 57.359 30.769 0.00 0.00 0.00 1.98
77 78 8.514594 TGAACAAATGACAGAATCCAAGTTATC 58.485 33.333 0.00 0.00 0.00 1.75
78 79 8.408043 TGAACAAATGACAGAATCCAAGTTAT 57.592 30.769 0.00 0.00 0.00 1.89
79 80 7.815840 TGAACAAATGACAGAATCCAAGTTA 57.184 32.000 0.00 0.00 0.00 2.24
80 81 6.713762 TGAACAAATGACAGAATCCAAGTT 57.286 33.333 0.00 0.00 0.00 2.66
81 82 6.491062 TGATGAACAAATGACAGAATCCAAGT 59.509 34.615 0.00 0.00 0.00 3.16
82 83 6.916440 TGATGAACAAATGACAGAATCCAAG 58.084 36.000 0.00 0.00 0.00 3.61
83 84 6.897706 TGATGAACAAATGACAGAATCCAA 57.102 33.333 0.00 0.00 0.00 3.53
84 85 6.434965 ACATGATGAACAAATGACAGAATCCA 59.565 34.615 0.00 0.00 0.00 3.41
85 86 6.860080 ACATGATGAACAAATGACAGAATCC 58.140 36.000 0.00 0.00 0.00 3.01
86 87 7.532571 TGACATGATGAACAAATGACAGAATC 58.467 34.615 0.00 0.00 0.00 2.52
87 88 7.457024 TGACATGATGAACAAATGACAGAAT 57.543 32.000 0.00 0.00 0.00 2.40
88 89 6.880942 TGACATGATGAACAAATGACAGAA 57.119 33.333 0.00 0.00 0.00 3.02
89 90 6.487668 AGTTGACATGATGAACAAATGACAGA 59.512 34.615 0.00 0.00 30.04 3.41
90 91 6.675026 AGTTGACATGATGAACAAATGACAG 58.325 36.000 0.00 0.00 30.04 3.51
91 92 6.638096 AGTTGACATGATGAACAAATGACA 57.362 33.333 0.00 5.42 0.00 3.58
111 112 9.338622 GGGCATTGTTACAGTAGAATAATAGTT 57.661 33.333 0.00 0.00 0.00 2.24
112 113 8.714906 AGGGCATTGTTACAGTAGAATAATAGT 58.285 33.333 0.00 0.00 0.00 2.12
113 114 9.209175 GAGGGCATTGTTACAGTAGAATAATAG 57.791 37.037 0.00 0.00 0.00 1.73
114 115 8.710239 TGAGGGCATTGTTACAGTAGAATAATA 58.290 33.333 0.00 0.00 0.00 0.98
115 116 7.573710 TGAGGGCATTGTTACAGTAGAATAAT 58.426 34.615 0.00 0.00 0.00 1.28
116 117 6.953101 TGAGGGCATTGTTACAGTAGAATAA 58.047 36.000 0.00 0.00 0.00 1.40
117 118 6.553953 TGAGGGCATTGTTACAGTAGAATA 57.446 37.500 0.00 0.00 0.00 1.75
118 119 5.435686 TGAGGGCATTGTTACAGTAGAAT 57.564 39.130 0.00 0.00 0.00 2.40
119 120 4.901197 TGAGGGCATTGTTACAGTAGAA 57.099 40.909 0.00 0.00 0.00 2.10
120 121 4.323485 CCTTGAGGGCATTGTTACAGTAGA 60.323 45.833 0.00 0.00 0.00 2.59
121 122 3.941483 CCTTGAGGGCATTGTTACAGTAG 59.059 47.826 0.00 0.00 0.00 2.57
122 123 3.329520 ACCTTGAGGGCATTGTTACAGTA 59.670 43.478 1.54 0.00 40.27 2.74
123 124 2.108250 ACCTTGAGGGCATTGTTACAGT 59.892 45.455 1.54 0.00 40.27 3.55
124 125 2.489329 CACCTTGAGGGCATTGTTACAG 59.511 50.000 1.54 0.00 40.27 2.74
125 126 2.513753 CACCTTGAGGGCATTGTTACA 58.486 47.619 1.54 0.00 40.27 2.41
126 127 1.818674 CCACCTTGAGGGCATTGTTAC 59.181 52.381 1.54 0.00 40.27 2.50
127 128 1.707989 TCCACCTTGAGGGCATTGTTA 59.292 47.619 1.54 0.00 40.27 2.41
128 129 0.482446 TCCACCTTGAGGGCATTGTT 59.518 50.000 1.54 0.00 40.27 2.83
129 130 0.482446 TTCCACCTTGAGGGCATTGT 59.518 50.000 1.54 0.00 40.27 2.71
130 131 1.856629 ATTCCACCTTGAGGGCATTG 58.143 50.000 1.54 0.00 40.27 2.82
131 132 2.568509 CAAATTCCACCTTGAGGGCATT 59.431 45.455 1.54 0.00 40.27 3.56
132 133 2.181975 CAAATTCCACCTTGAGGGCAT 58.818 47.619 1.54 0.00 40.27 4.40
133 134 1.146774 TCAAATTCCACCTTGAGGGCA 59.853 47.619 1.54 0.00 40.27 5.36
134 135 1.923356 TCAAATTCCACCTTGAGGGC 58.077 50.000 1.54 0.00 40.27 5.19
135 136 2.232208 GCTTCAAATTCCACCTTGAGGG 59.768 50.000 1.54 0.00 40.27 4.30
136 137 3.160269 AGCTTCAAATTCCACCTTGAGG 58.840 45.455 0.00 0.00 42.17 3.86
137 138 6.521151 AATAGCTTCAAATTCCACCTTGAG 57.479 37.500 0.00 0.00 33.30 3.02
138 139 7.888021 TCTTAATAGCTTCAAATTCCACCTTGA 59.112 33.333 0.00 0.00 0.00 3.02
139 140 8.055279 TCTTAATAGCTTCAAATTCCACCTTG 57.945 34.615 0.00 0.00 0.00 3.61
140 141 8.829373 ATCTTAATAGCTTCAAATTCCACCTT 57.171 30.769 0.00 0.00 0.00 3.50
141 142 8.689972 CAATCTTAATAGCTTCAAATTCCACCT 58.310 33.333 0.00 0.00 0.00 4.00
142 143 8.686334 TCAATCTTAATAGCTTCAAATTCCACC 58.314 33.333 0.00 0.00 0.00 4.61
154 155 9.007901 GCCATAGACATTTCAATCTTAATAGCT 57.992 33.333 0.00 0.00 0.00 3.32
155 156 9.007901 AGCCATAGACATTTCAATCTTAATAGC 57.992 33.333 0.00 0.00 0.00 2.97
159 160 9.208022 CGATAGCCATAGACATTTCAATCTTAA 57.792 33.333 0.00 0.00 0.00 1.85
160 161 8.585018 TCGATAGCCATAGACATTTCAATCTTA 58.415 33.333 0.00 0.00 0.00 2.10
161 162 7.445121 TCGATAGCCATAGACATTTCAATCTT 58.555 34.615 0.00 0.00 0.00 2.40
162 163 6.997655 TCGATAGCCATAGACATTTCAATCT 58.002 36.000 0.00 0.00 0.00 2.40
163 164 7.658179 TTCGATAGCCATAGACATTTCAATC 57.342 36.000 0.00 0.00 0.00 2.67
164 165 7.120285 CCATTCGATAGCCATAGACATTTCAAT 59.880 37.037 0.00 0.00 0.00 2.57
165 166 6.427853 CCATTCGATAGCCATAGACATTTCAA 59.572 38.462 0.00 0.00 0.00 2.69
166 167 5.934043 CCATTCGATAGCCATAGACATTTCA 59.066 40.000 0.00 0.00 0.00 2.69
167 168 5.934625 ACCATTCGATAGCCATAGACATTTC 59.065 40.000 0.00 0.00 0.00 2.17
168 169 5.869579 ACCATTCGATAGCCATAGACATTT 58.130 37.500 0.00 0.00 0.00 2.32
169 170 5.247110 AGACCATTCGATAGCCATAGACATT 59.753 40.000 0.00 0.00 0.00 2.71
170 171 4.774726 AGACCATTCGATAGCCATAGACAT 59.225 41.667 0.00 0.00 0.00 3.06
171 172 4.152647 AGACCATTCGATAGCCATAGACA 58.847 43.478 0.00 0.00 0.00 3.41
172 173 4.792521 AGACCATTCGATAGCCATAGAC 57.207 45.455 0.00 0.00 0.00 2.59
173 174 5.185249 GGTTAGACCATTCGATAGCCATAGA 59.815 44.000 0.00 0.00 38.42 1.98
174 175 5.186021 AGGTTAGACCATTCGATAGCCATAG 59.814 44.000 0.00 0.00 41.95 2.23
175 176 5.084519 AGGTTAGACCATTCGATAGCCATA 58.915 41.667 0.00 0.00 41.95 2.74
176 177 3.904339 AGGTTAGACCATTCGATAGCCAT 59.096 43.478 0.00 0.00 41.95 4.40
177 178 3.305720 AGGTTAGACCATTCGATAGCCA 58.694 45.455 0.00 0.00 41.95 4.75
178 179 4.308265 GAAGGTTAGACCATTCGATAGCC 58.692 47.826 0.00 0.00 41.95 3.93
179 180 4.308265 GGAAGGTTAGACCATTCGATAGC 58.692 47.826 0.00 0.00 41.95 2.97
180 181 4.547532 CGGAAGGTTAGACCATTCGATAG 58.452 47.826 0.00 0.00 41.95 2.08
181 182 4.579454 CGGAAGGTTAGACCATTCGATA 57.421 45.455 0.00 0.00 41.95 2.92
182 183 3.454371 CGGAAGGTTAGACCATTCGAT 57.546 47.619 0.00 0.00 41.95 3.59
183 184 2.953466 CGGAAGGTTAGACCATTCGA 57.047 50.000 0.00 0.00 41.95 3.71
196 197 3.046821 CGATTGTACGAAGACCGGAAGG 61.047 54.545 9.46 0.00 46.76 3.46
197 198 2.182825 CGATTGTACGAAGACCGGAAG 58.817 52.381 9.46 0.00 43.93 3.46
198 199 1.135315 CCGATTGTACGAAGACCGGAA 60.135 52.381 9.46 0.00 43.93 4.30
199 200 0.452987 CCGATTGTACGAAGACCGGA 59.547 55.000 9.46 0.00 43.93 5.14
200 201 0.452987 TCCGATTGTACGAAGACCGG 59.547 55.000 0.00 0.00 43.93 5.28
201 202 1.131883 AGTCCGATTGTACGAAGACCG 59.868 52.381 0.00 0.00 45.44 4.79
202 203 2.163010 TGAGTCCGATTGTACGAAGACC 59.837 50.000 0.00 2.42 35.09 3.85
203 204 3.482722 TGAGTCCGATTGTACGAAGAC 57.517 47.619 0.00 4.03 35.09 3.01
204 205 4.421058 CATTGAGTCCGATTGTACGAAGA 58.579 43.478 0.00 0.00 35.09 2.87
205 206 3.551890 CCATTGAGTCCGATTGTACGAAG 59.448 47.826 0.00 0.00 35.09 3.79
206 207 3.056393 ACCATTGAGTCCGATTGTACGAA 60.056 43.478 0.00 0.00 35.09 3.85
207 208 2.494471 ACCATTGAGTCCGATTGTACGA 59.506 45.455 0.00 0.00 35.09 3.43
208 209 2.603110 CACCATTGAGTCCGATTGTACG 59.397 50.000 0.00 0.00 0.00 3.67
209 210 2.936498 CCACCATTGAGTCCGATTGTAC 59.064 50.000 0.00 0.00 0.00 2.90
210 211 2.679639 GCCACCATTGAGTCCGATTGTA 60.680 50.000 0.00 0.00 0.00 2.41
211 212 1.950484 GCCACCATTGAGTCCGATTGT 60.950 52.381 0.00 0.00 0.00 2.71
212 213 0.734889 GCCACCATTGAGTCCGATTG 59.265 55.000 0.00 0.00 0.00 2.67
213 214 0.394352 GGCCACCATTGAGTCCGATT 60.394 55.000 0.00 0.00 0.00 3.34
214 215 1.224592 GGCCACCATTGAGTCCGAT 59.775 57.895 0.00 0.00 0.00 4.18
215 216 2.668632 GGCCACCATTGAGTCCGA 59.331 61.111 0.00 0.00 0.00 4.55
216 217 2.438434 GGGCCACCATTGAGTCCG 60.438 66.667 4.39 0.00 36.50 4.79
217 218 0.251787 AAAGGGCCACCATTGAGTCC 60.252 55.000 6.18 0.00 40.13 3.85
218 219 1.632589 AAAAGGGCCACCATTGAGTC 58.367 50.000 6.18 0.00 40.13 3.36
219 220 2.101640 AAAAAGGGCCACCATTGAGT 57.898 45.000 6.18 0.00 40.13 3.41
235 236 5.809001 AGTGAGGCATCAGTCATAGAAAAA 58.191 37.500 0.00 0.00 33.65 1.94
236 237 5.426689 AGTGAGGCATCAGTCATAGAAAA 57.573 39.130 0.00 0.00 33.65 2.29
237 238 5.046376 TCAAGTGAGGCATCAGTCATAGAAA 60.046 40.000 9.49 0.00 38.18 2.52
238 239 4.467438 TCAAGTGAGGCATCAGTCATAGAA 59.533 41.667 9.49 0.00 38.18 2.10
239 240 4.026052 TCAAGTGAGGCATCAGTCATAGA 58.974 43.478 9.49 3.18 38.18 1.98
240 241 4.397481 TCAAGTGAGGCATCAGTCATAG 57.603 45.455 9.49 0.82 38.18 2.23
241 242 6.484364 TTATCAAGTGAGGCATCAGTCATA 57.516 37.500 9.49 6.46 38.18 2.15
242 243 3.928005 ATCAAGTGAGGCATCAGTCAT 57.072 42.857 9.49 2.12 38.18 3.06
243 244 4.824479 TTATCAAGTGAGGCATCAGTCA 57.176 40.909 9.49 0.00 38.18 3.41
244 245 5.819379 TGATTTATCAAGTGAGGCATCAGTC 59.181 40.000 9.49 0.00 38.18 3.51
245 246 5.748402 TGATTTATCAAGTGAGGCATCAGT 58.252 37.500 0.00 0.62 41.01 3.41
246 247 6.072618 GGATGATTTATCAAGTGAGGCATCAG 60.073 42.308 0.00 0.00 40.69 2.90
247 248 5.766670 GGATGATTTATCAAGTGAGGCATCA 59.233 40.000 0.00 0.00 40.69 3.07
248 249 5.766670 TGGATGATTTATCAAGTGAGGCATC 59.233 40.000 0.00 0.00 40.69 3.91
275 276 1.213926 GATCTCCCTGGCCAATTGACT 59.786 52.381 7.01 0.00 0.00 3.41
284 285 2.016096 GCAGTTCTTGATCTCCCTGGC 61.016 57.143 0.00 0.00 0.00 4.85
285 286 1.280133 TGCAGTTCTTGATCTCCCTGG 59.720 52.381 0.00 0.00 0.00 4.45
290 291 3.756069 GCAACATGCAGTTCTTGATCTC 58.244 45.455 0.00 0.00 44.26 2.75
303 304 1.251251 AAACTCCCTCTGCAACATGC 58.749 50.000 0.00 0.00 45.29 4.06
308 309 3.149196 CTGCTTTAAACTCCCTCTGCAA 58.851 45.455 0.00 0.00 0.00 4.08
326 327 2.999355 GTGATCTCAAGGTCTTCACTGC 59.001 50.000 0.00 0.00 35.09 4.40
336 337 7.756722 GTGAAACCATATTTTGTGATCTCAAGG 59.243 37.037 9.91 9.87 0.00 3.61
338 339 8.175925 TGTGAAACCATATTTTGTGATCTCAA 57.824 30.769 6.11 6.11 34.36 3.02
342 343 8.761575 ACAATGTGAAACCATATTTTGTGATC 57.238 30.769 0.00 0.00 34.36 2.92
349 350 6.996509 AGCAAGACAATGTGAAACCATATTT 58.003 32.000 0.00 0.00 34.36 1.40
352 353 7.701539 ATTAGCAAGACAATGTGAAACCATA 57.298 32.000 0.00 0.00 34.36 2.74
354 355 6.403866 AATTAGCAAGACAATGTGAAACCA 57.596 33.333 0.00 0.00 34.36 3.67
358 359 6.405731 GGGCATAATTAGCAAGACAATGTGAA 60.406 38.462 0.00 0.00 0.00 3.18
383 384 1.835483 GCGGTGCTATGAGCCATTCG 61.835 60.000 0.00 0.00 41.51 3.34
393 394 0.881118 CAACCAACAAGCGGTGCTAT 59.119 50.000 0.00 0.00 38.25 2.97
450 451 7.778185 TCTAAAGTAACAGGCTTAGAGTCTT 57.222 36.000 0.00 0.00 0.00 3.01
451 452 7.778185 TTCTAAAGTAACAGGCTTAGAGTCT 57.222 36.000 0.00 0.00 0.00 3.24
487 488 9.083422 TGTGGAATGTATTTTATTCAGGTTCAA 57.917 29.630 0.00 0.00 36.50 2.69
488 489 8.642935 TGTGGAATGTATTTTATTCAGGTTCA 57.357 30.769 0.00 0.00 36.50 3.18
489 490 9.921637 TTTGTGGAATGTATTTTATTCAGGTTC 57.078 29.630 0.00 0.00 36.50 3.62
490 491 9.705290 GTTTGTGGAATGTATTTTATTCAGGTT 57.295 29.630 0.00 0.00 36.50 3.50
491 492 8.026607 CGTTTGTGGAATGTATTTTATTCAGGT 58.973 33.333 0.00 0.00 36.50 4.00
493 494 8.964420 ACGTTTGTGGAATGTATTTTATTCAG 57.036 30.769 0.00 0.00 35.73 3.02
494 495 9.751542 AAACGTTTGTGGAATGTATTTTATTCA 57.248 25.926 13.81 0.00 36.47 2.57
537 538 6.200286 GCTCATGTTCCATTGCATAAATTCAG 59.800 38.462 0.00 0.00 0.00 3.02
606 608 1.614241 AAGTGCCCTACCGCGAAGAT 61.614 55.000 8.23 0.00 0.00 2.40
718 727 2.669364 GCGAACGGTCTGAAAGTTCTA 58.331 47.619 18.13 0.00 41.30 2.10
840 849 3.997400 CTCGAGGTGGAGGCGAGGA 62.997 68.421 3.91 0.00 45.54 3.71
851 860 2.358267 CGGAGTGTTATAAGCTCGAGGT 59.642 50.000 12.24 12.24 0.00 3.85
901 910 2.972505 CGGTGGTGTGTGTGAGCC 60.973 66.667 0.00 0.00 0.00 4.70
971 983 2.292845 CTCTATCAGCACTGCTCGATCA 59.707 50.000 15.17 0.00 36.40 2.92
1094 1106 2.267324 GAGCGAGGAAGCAAGGCT 59.733 61.111 0.00 0.00 42.56 4.58
1098 1110 4.082523 CGGGGAGCGAGGAAGCAA 62.083 66.667 0.00 0.00 40.15 3.91
1177 1189 5.148651 AGCCAAACTGAACTTCGTATACT 57.851 39.130 0.56 0.00 0.00 2.12
1180 1192 2.993899 CGAGCCAAACTGAACTTCGTAT 59.006 45.455 0.00 0.00 0.00 3.06
1183 1195 1.192534 GACGAGCCAAACTGAACTTCG 59.807 52.381 0.00 0.00 0.00 3.79
1216 1232 2.494870 GCATGCACCTCCAGAGAAAAAT 59.505 45.455 14.21 0.00 0.00 1.82
1226 1242 2.104267 CATGTCAGCATGCACCTCC 58.896 57.895 21.98 3.20 44.87 4.30
1460 1476 2.383527 GGTCTCGTGCTTCGCCTTG 61.384 63.158 0.00 0.00 39.67 3.61
1526 1542 3.081409 GCCGTCTCCTTGGCCCTA 61.081 66.667 0.00 0.00 45.73 3.53
1637 1653 0.627986 CCTTGGCCCTCTCCTTCATT 59.372 55.000 0.00 0.00 0.00 2.57
1988 2004 2.683933 TCCCTCTCCTTGGTCGCC 60.684 66.667 0.00 0.00 0.00 5.54
1991 2007 0.252284 TCCTGTCCCTCTCCTTGGTC 60.252 60.000 0.00 0.00 0.00 4.02
2068 2084 0.990374 AAGCCAGACAGCCATCTTCT 59.010 50.000 0.00 0.00 0.00 2.85
2106 2122 1.151668 CAACTCGAAACAGAGGCCAG 58.848 55.000 5.01 0.00 42.31 4.85
2199 2218 7.588143 AGATCGCTCCAATATTTTTATCTCG 57.412 36.000 0.00 0.00 0.00 4.04
2205 2224 8.506168 TTCTACAAGATCGCTCCAATATTTTT 57.494 30.769 0.00 0.00 0.00 1.94
2300 2357 4.340097 TCCAAAGACAAAGACGACTAGTGA 59.660 41.667 0.00 0.00 0.00 3.41
2313 2370 2.613026 TCGCAGAGTTCCAAAGACAA 57.387 45.000 0.00 0.00 0.00 3.18
2334 2391 3.863142 AAACTGAAGATCAATGGCAGC 57.137 42.857 0.00 0.00 0.00 5.25
2371 2459 6.091305 CCACGAATTGCGAGATGATACATAAT 59.909 38.462 0.00 0.00 44.57 1.28
2372 2460 5.405269 CCACGAATTGCGAGATGATACATAA 59.595 40.000 0.00 0.00 44.57 1.90
2374 2462 3.742882 CCACGAATTGCGAGATGATACAT 59.257 43.478 0.00 0.00 44.57 2.29
2375 2463 3.123050 CCACGAATTGCGAGATGATACA 58.877 45.455 0.00 0.00 44.57 2.29
2376 2464 2.476619 CCCACGAATTGCGAGATGATAC 59.523 50.000 0.00 0.00 44.57 2.24
2377 2465 2.364002 TCCCACGAATTGCGAGATGATA 59.636 45.455 0.00 0.00 44.57 2.15
2378 2466 1.138859 TCCCACGAATTGCGAGATGAT 59.861 47.619 0.00 0.00 44.57 2.45
2380 2468 0.652592 GTCCCACGAATTGCGAGATG 59.347 55.000 0.00 0.00 44.57 2.90
2381 2469 0.806102 CGTCCCACGAATTGCGAGAT 60.806 55.000 0.00 0.00 46.05 2.75
2383 2471 2.452813 CCGTCCCACGAATTGCGAG 61.453 63.158 0.00 0.00 46.05 5.03
2385 2473 3.496131 CCCGTCCCACGAATTGCG 61.496 66.667 0.00 0.00 46.05 4.85
2386 2474 2.046700 TCCCGTCCCACGAATTGC 60.047 61.111 0.00 0.00 46.05 3.56
2387 2475 2.106683 GCTCCCGTCCCACGAATTG 61.107 63.158 0.00 0.00 46.05 2.32
2388 2476 2.267961 GCTCCCGTCCCACGAATT 59.732 61.111 0.00 0.00 46.05 2.17
2393 2481 3.607370 GAACTGGCTCCCGTCCCAC 62.607 68.421 0.00 0.00 0.00 4.61
2394 2482 3.319198 GAACTGGCTCCCGTCCCA 61.319 66.667 0.00 0.00 0.00 4.37
2395 2483 4.452733 CGAACTGGCTCCCGTCCC 62.453 72.222 0.00 0.00 0.00 4.46
2397 2485 0.458025 CTTACGAACTGGCTCCCGTC 60.458 60.000 0.00 0.00 36.58 4.79
2399 2487 1.153628 CCTTACGAACTGGCTCCCG 60.154 63.158 0.00 0.00 0.00 5.14
2400 2488 0.391263 CACCTTACGAACTGGCTCCC 60.391 60.000 0.00 0.00 0.00 4.30
2401 2489 0.606604 TCACCTTACGAACTGGCTCC 59.393 55.000 0.00 0.00 0.00 4.70
2402 2490 2.271800 CATCACCTTACGAACTGGCTC 58.728 52.381 0.00 0.00 0.00 4.70
2403 2491 1.623811 ACATCACCTTACGAACTGGCT 59.376 47.619 0.00 0.00 0.00 4.75
2404 2492 2.094762 ACATCACCTTACGAACTGGC 57.905 50.000 0.00 0.00 0.00 4.85
2415 4455 2.015736 CTCGCTAAGCAACATCACCT 57.984 50.000 0.00 0.00 0.00 4.00
2437 4477 8.893727 TCTTGTTAGAAAAGAAAACTGGAAGAG 58.106 33.333 0.00 0.00 31.89 2.85
2442 4482 9.971922 AATCATCTTGTTAGAAAAGAAAACTGG 57.028 29.630 0.00 0.00 37.22 4.00
2447 4487 8.585018 GGGGAAATCATCTTGTTAGAAAAGAAA 58.415 33.333 0.00 0.00 37.22 2.52
2451 4532 6.780031 TGTGGGGAAATCATCTTGTTAGAAAA 59.220 34.615 0.00 0.00 33.20 2.29
2458 4539 3.524095 TGTGTGGGGAAATCATCTTGT 57.476 42.857 0.00 0.00 0.00 3.16
2460 4541 5.885449 TTTTTGTGTGGGGAAATCATCTT 57.115 34.783 0.00 0.00 0.00 2.40
2488 4569 2.386661 TCTCTCCGCAACAGGAAATC 57.613 50.000 0.00 0.00 40.25 2.17
2489 4570 2.859165 TTCTCTCCGCAACAGGAAAT 57.141 45.000 0.00 0.00 40.25 2.17
2490 4571 2.859165 ATTCTCTCCGCAACAGGAAA 57.141 45.000 0.00 0.00 40.25 3.13
2491 4572 2.859165 AATTCTCTCCGCAACAGGAA 57.141 45.000 0.00 0.00 40.25 3.36
2492 4573 2.038426 TGAAATTCTCTCCGCAACAGGA 59.962 45.455 0.00 0.00 38.80 3.86
2493 4574 2.426522 TGAAATTCTCTCCGCAACAGG 58.573 47.619 0.00 0.00 0.00 4.00
2494 4575 3.748048 TCTTGAAATTCTCTCCGCAACAG 59.252 43.478 0.00 0.00 0.00 3.16
2495 4576 3.738982 TCTTGAAATTCTCTCCGCAACA 58.261 40.909 0.00 0.00 0.00 3.33
2496 4577 4.954092 ATCTTGAAATTCTCTCCGCAAC 57.046 40.909 0.00 0.00 0.00 4.17
2498 4579 7.050377 AGATTAATCTTGAAATTCTCTCCGCA 58.950 34.615 12.37 0.00 31.97 5.69
2499 4580 7.225538 TGAGATTAATCTTGAAATTCTCTCCGC 59.774 37.037 18.88 1.70 37.25 5.54
2500 4581 8.654230 TGAGATTAATCTTGAAATTCTCTCCG 57.346 34.615 18.88 0.00 37.25 4.63
2501 4582 9.829507 TCTGAGATTAATCTTGAAATTCTCTCC 57.170 33.333 18.88 2.71 37.25 3.71
2604 4701 6.380274 TGATAGTTTGGGGTTTGTTAACACAA 59.620 34.615 8.07 6.15 39.53 3.33
2609 4706 5.536916 CACCTGATAGTTTGGGGTTTGTTAA 59.463 40.000 0.00 0.00 0.00 2.01
2610 4707 5.074115 CACCTGATAGTTTGGGGTTTGTTA 58.926 41.667 0.00 0.00 0.00 2.41
2619 4716 6.633500 TTTCAAAGTCACCTGATAGTTTGG 57.367 37.500 0.00 0.00 0.00 3.28
2647 4744 9.829507 TCAGATGTTTTTGGAACATACAAAATT 57.170 25.926 4.54 0.00 44.44 1.82
2648 4745 9.829507 TTCAGATGTTTTTGGAACATACAAAAT 57.170 25.926 4.54 0.00 44.44 1.82
2649 4746 9.829507 ATTCAGATGTTTTTGGAACATACAAAA 57.170 25.926 4.54 0.00 43.68 2.44
2683 4780 6.546428 TTTTTAGGGGTTTGTGAACATTCA 57.454 33.333 0.00 0.00 37.51 2.57
2703 4800 6.147656 GCATTTCGAATTTGGGTCTGATTTTT 59.852 34.615 0.00 0.00 0.00 1.94
2704 4801 5.639082 GCATTTCGAATTTGGGTCTGATTTT 59.361 36.000 0.00 0.00 0.00 1.82
2705 4802 5.170748 GCATTTCGAATTTGGGTCTGATTT 58.829 37.500 0.00 0.00 0.00 2.17
2706 4803 4.220382 TGCATTTCGAATTTGGGTCTGATT 59.780 37.500 0.00 0.00 0.00 2.57
2707 4804 3.763360 TGCATTTCGAATTTGGGTCTGAT 59.237 39.130 0.00 0.00 0.00 2.90
2708 4805 3.057596 GTGCATTTCGAATTTGGGTCTGA 60.058 43.478 0.00 0.00 0.00 3.27
2709 4806 3.244976 GTGCATTTCGAATTTGGGTCTG 58.755 45.455 0.00 0.00 0.00 3.51
2710 4807 2.890311 TGTGCATTTCGAATTTGGGTCT 59.110 40.909 0.00 0.00 0.00 3.85
2711 4808 3.296322 TGTGCATTTCGAATTTGGGTC 57.704 42.857 0.00 0.00 0.00 4.46
2712 4809 3.959535 ATGTGCATTTCGAATTTGGGT 57.040 38.095 0.00 0.00 0.00 4.51
2713 4810 4.244066 TCAATGTGCATTTCGAATTTGGG 58.756 39.130 0.00 0.00 0.00 4.12
2714 4811 5.162794 TCTCAATGTGCATTTCGAATTTGG 58.837 37.500 0.00 0.00 0.00 3.28
2715 4812 6.693761 TTCTCAATGTGCATTTCGAATTTG 57.306 33.333 0.00 1.17 0.00 2.32
2716 4813 7.894376 ATTTCTCAATGTGCATTTCGAATTT 57.106 28.000 0.00 0.00 0.00 1.82
2717 4814 8.984891 TTATTTCTCAATGTGCATTTCGAATT 57.015 26.923 0.00 0.00 0.00 2.17
2718 4815 8.984891 TTTATTTCTCAATGTGCATTTCGAAT 57.015 26.923 0.00 0.00 0.00 3.34
2719 4816 8.809159 TTTTATTTCTCAATGTGCATTTCGAA 57.191 26.923 0.00 0.00 0.00 3.71
2720 4817 8.809159 TTTTTATTTCTCAATGTGCATTTCGA 57.191 26.923 0.00 0.00 0.00 3.71
2784 4881 5.139727 TCCAGATGTGAGGTGTCAATTTTT 58.860 37.500 0.00 0.00 33.27 1.94
2785 4882 4.728772 TCCAGATGTGAGGTGTCAATTTT 58.271 39.130 0.00 0.00 33.27 1.82
2786 4883 4.371624 TCCAGATGTGAGGTGTCAATTT 57.628 40.909 0.00 0.00 33.27 1.82
2787 4884 4.581309 ATCCAGATGTGAGGTGTCAATT 57.419 40.909 0.00 0.00 33.27 2.32
2788 4885 4.019051 TGAATCCAGATGTGAGGTGTCAAT 60.019 41.667 0.00 0.00 33.27 2.57
2789 4886 3.327464 TGAATCCAGATGTGAGGTGTCAA 59.673 43.478 0.00 0.00 33.27 3.18
2790 4887 2.905736 TGAATCCAGATGTGAGGTGTCA 59.094 45.455 0.00 0.00 0.00 3.58
2791 4888 3.616956 TGAATCCAGATGTGAGGTGTC 57.383 47.619 0.00 0.00 0.00 3.67
2792 4889 4.263639 ACAATGAATCCAGATGTGAGGTGT 60.264 41.667 0.00 0.00 0.00 4.16
2793 4890 4.267536 ACAATGAATCCAGATGTGAGGTG 58.732 43.478 0.00 0.00 0.00 4.00
2794 4891 4.581309 ACAATGAATCCAGATGTGAGGT 57.419 40.909 0.00 0.00 0.00 3.85
2795 4892 5.191426 AGAACAATGAATCCAGATGTGAGG 58.809 41.667 0.00 0.00 0.00 3.86
2796 4893 7.046652 AGTAGAACAATGAATCCAGATGTGAG 58.953 38.462 0.00 0.00 0.00 3.51
2797 4894 6.950842 AGTAGAACAATGAATCCAGATGTGA 58.049 36.000 0.00 0.00 0.00 3.58
2798 4895 7.621428 AAGTAGAACAATGAATCCAGATGTG 57.379 36.000 0.00 0.00 0.00 3.21
2799 4896 8.105829 AGAAAGTAGAACAATGAATCCAGATGT 58.894 33.333 0.00 0.00 0.00 3.06
2800 4897 8.503458 AGAAAGTAGAACAATGAATCCAGATG 57.497 34.615 0.00 0.00 0.00 2.90
2801 4898 8.324306 TGAGAAAGTAGAACAATGAATCCAGAT 58.676 33.333 0.00 0.00 0.00 2.90
2802 4899 7.679783 TGAGAAAGTAGAACAATGAATCCAGA 58.320 34.615 0.00 0.00 0.00 3.86
2803 4900 7.912056 TGAGAAAGTAGAACAATGAATCCAG 57.088 36.000 0.00 0.00 0.00 3.86
2804 4901 8.733458 CATTGAGAAAGTAGAACAATGAATCCA 58.267 33.333 0.00 0.00 45.70 3.41
2805 4902 8.734386 ACATTGAGAAAGTAGAACAATGAATCC 58.266 33.333 19.89 0.00 45.70 3.01
2806 4903 9.552114 CACATTGAGAAAGTAGAACAATGAATC 57.448 33.333 19.89 0.00 45.70 2.52
2807 4904 8.025445 GCACATTGAGAAAGTAGAACAATGAAT 58.975 33.333 19.89 1.77 45.70 2.57
2808 4905 7.013178 TGCACATTGAGAAAGTAGAACAATGAA 59.987 33.333 19.89 6.90 45.70 2.57
2809 4906 6.486320 TGCACATTGAGAAAGTAGAACAATGA 59.514 34.615 19.89 1.19 45.70 2.57
2811 4908 6.882610 TGCACATTGAGAAAGTAGAACAAT 57.117 33.333 0.00 0.00 0.00 2.71
2812 4909 6.882610 ATGCACATTGAGAAAGTAGAACAA 57.117 33.333 0.00 0.00 0.00 2.83
2813 4910 6.882610 AATGCACATTGAGAAAGTAGAACA 57.117 33.333 0.00 0.00 0.00 3.18
2814 4911 7.362662 TGAAATGCACATTGAGAAAGTAGAAC 58.637 34.615 0.00 0.00 0.00 3.01
2815 4912 7.509141 TGAAATGCACATTGAGAAAGTAGAA 57.491 32.000 0.00 0.00 0.00 2.10
2816 4913 7.692460 ATGAAATGCACATTGAGAAAGTAGA 57.308 32.000 0.00 0.00 0.00 2.59
2819 4916 9.362539 GAAATATGAAATGCACATTGAGAAAGT 57.637 29.630 0.00 0.00 0.00 2.66
2820 4917 9.361315 TGAAATATGAAATGCACATTGAGAAAG 57.639 29.630 0.00 0.00 0.00 2.62
2821 4918 9.708092 TTGAAATATGAAATGCACATTGAGAAA 57.292 25.926 0.00 0.00 0.00 2.52
2822 4919 9.361315 CTTGAAATATGAAATGCACATTGAGAA 57.639 29.630 0.00 0.00 0.00 2.87
2823 4920 7.490079 GCTTGAAATATGAAATGCACATTGAGA 59.510 33.333 0.00 0.00 0.00 3.27
2824 4921 7.491372 AGCTTGAAATATGAAATGCACATTGAG 59.509 33.333 0.00 0.00 0.00 3.02
2825 4922 7.276878 CAGCTTGAAATATGAAATGCACATTGA 59.723 33.333 0.00 0.00 0.00 2.57
2826 4923 7.276878 TCAGCTTGAAATATGAAATGCACATTG 59.723 33.333 0.00 0.00 0.00 2.82
2827 4924 7.324935 TCAGCTTGAAATATGAAATGCACATT 58.675 30.769 0.00 0.00 0.00 2.71
2828 4925 6.869695 TCAGCTTGAAATATGAAATGCACAT 58.130 32.000 0.00 0.00 0.00 3.21
2829 4926 6.270156 TCAGCTTGAAATATGAAATGCACA 57.730 33.333 0.00 0.00 0.00 4.57
2830 4927 7.330208 AGTTTCAGCTTGAAATATGAAATGCAC 59.670 33.333 12.42 0.33 46.55 4.57
2831 4928 7.380536 AGTTTCAGCTTGAAATATGAAATGCA 58.619 30.769 12.42 0.00 46.55 3.96
2832 4929 7.823149 AGTTTCAGCTTGAAATATGAAATGC 57.177 32.000 12.42 0.00 46.55 3.56
2836 4933 9.912634 CCTAAAAGTTTCAGCTTGAAATATGAA 57.087 29.630 12.42 0.00 46.55 2.57
2837 4934 8.522830 CCCTAAAAGTTTCAGCTTGAAATATGA 58.477 33.333 12.42 0.00 46.55 2.15
2838 4935 7.761249 CCCCTAAAAGTTTCAGCTTGAAATATG 59.239 37.037 12.42 2.31 46.55 1.78
2839 4936 7.454694 ACCCCTAAAAGTTTCAGCTTGAAATAT 59.545 33.333 12.42 4.85 46.55 1.28
2840 4937 6.780522 ACCCCTAAAAGTTTCAGCTTGAAATA 59.219 34.615 12.42 3.52 46.55 1.40
2841 4938 5.602561 ACCCCTAAAAGTTTCAGCTTGAAAT 59.397 36.000 12.42 2.74 46.55 2.17
2842 4939 4.959839 ACCCCTAAAAGTTTCAGCTTGAAA 59.040 37.500 7.09 7.09 43.37 2.69
2843 4940 4.542697 ACCCCTAAAAGTTTCAGCTTGAA 58.457 39.130 0.00 0.00 34.03 2.69
2844 4941 4.178956 ACCCCTAAAAGTTTCAGCTTGA 57.821 40.909 0.00 0.00 0.00 3.02
2845 4942 4.099419 ACAACCCCTAAAAGTTTCAGCTTG 59.901 41.667 0.00 0.00 0.00 4.01
2846 4943 4.286707 ACAACCCCTAAAAGTTTCAGCTT 58.713 39.130 0.00 0.00 0.00 3.74
2847 4944 3.910989 ACAACCCCTAAAAGTTTCAGCT 58.089 40.909 0.00 0.00 0.00 4.24
2848 4945 5.048921 GTCTACAACCCCTAAAAGTTTCAGC 60.049 44.000 0.00 0.00 0.00 4.26
2849 4946 6.017357 GTGTCTACAACCCCTAAAAGTTTCAG 60.017 42.308 0.00 0.00 0.00 3.02
2850 4947 5.824097 GTGTCTACAACCCCTAAAAGTTTCA 59.176 40.000 0.00 0.00 0.00 2.69
2851 4948 5.824097 TGTGTCTACAACCCCTAAAAGTTTC 59.176 40.000 0.00 0.00 32.88 2.78
2852 4949 5.757988 TGTGTCTACAACCCCTAAAAGTTT 58.242 37.500 0.00 0.00 32.88 2.66
2853 4950 5.376756 TGTGTCTACAACCCCTAAAAGTT 57.623 39.130 0.00 0.00 32.88 2.66
2854 4951 5.578157 ATGTGTCTACAACCCCTAAAAGT 57.422 39.130 0.00 0.00 40.84 2.66
2855 4952 6.715264 AGAAATGTGTCTACAACCCCTAAAAG 59.285 38.462 0.00 0.00 40.84 2.27
2856 4953 6.607019 AGAAATGTGTCTACAACCCCTAAAA 58.393 36.000 0.00 0.00 40.84 1.52
2857 4954 6.195600 AGAAATGTGTCTACAACCCCTAAA 57.804 37.500 0.00 0.00 40.84 1.85
2858 4955 5.836024 AGAAATGTGTCTACAACCCCTAA 57.164 39.130 0.00 0.00 40.84 2.69
2859 4956 5.836024 AAGAAATGTGTCTACAACCCCTA 57.164 39.130 0.00 0.00 40.84 3.53
2860 4957 4.724279 AAGAAATGTGTCTACAACCCCT 57.276 40.909 0.00 0.00 40.84 4.79
2861 4958 6.887626 TTTAAGAAATGTGTCTACAACCCC 57.112 37.500 0.00 0.00 40.84 4.95
2918 5015 3.511934 CCCCATGGTACCATTTCGAAAAA 59.488 43.478 25.25 0.00 33.90 1.94
2919 5016 3.093057 CCCCATGGTACCATTTCGAAAA 58.907 45.455 25.25 0.00 33.90 2.29
2920 5017 2.621929 CCCCCATGGTACCATTTCGAAA 60.622 50.000 25.25 13.91 33.90 3.46
2921 5018 1.064314 CCCCCATGGTACCATTTCGAA 60.064 52.381 25.25 0.00 33.90 3.71
2922 5019 0.548989 CCCCCATGGTACCATTTCGA 59.451 55.000 25.25 0.00 33.90 3.71
2923 5020 1.106944 GCCCCCATGGTACCATTTCG 61.107 60.000 25.25 13.75 33.90 3.46
2924 5021 1.106944 CGCCCCCATGGTACCATTTC 61.107 60.000 25.25 10.82 33.90 2.17
2925 5022 1.076339 CGCCCCCATGGTACCATTT 60.076 57.895 25.25 2.90 33.90 2.32
2926 5023 1.869824 AACGCCCCCATGGTACCATT 61.870 55.000 25.25 5.88 33.90 3.16
2927 5024 1.869824 AAACGCCCCCATGGTACCAT 61.870 55.000 22.23 22.23 37.08 3.55
2928 5025 1.206135 TAAACGCCCCCATGGTACCA 61.206 55.000 18.99 18.99 36.04 3.25
2929 5026 0.034283 TTAAACGCCCCCATGGTACC 60.034 55.000 11.73 4.43 36.04 3.34
2930 5027 1.385528 CTTAAACGCCCCCATGGTAC 58.614 55.000 11.73 0.00 36.04 3.34
2931 5028 0.256464 CCTTAAACGCCCCCATGGTA 59.744 55.000 11.73 0.00 36.04 3.25
2932 5029 1.000145 CCTTAAACGCCCCCATGGT 60.000 57.895 11.73 0.00 36.04 3.55
2933 5030 1.000145 ACCTTAAACGCCCCCATGG 60.000 57.895 4.14 4.14 37.09 3.66
2934 5031 0.610785 ACACCTTAAACGCCCCCATG 60.611 55.000 0.00 0.00 0.00 3.66
2935 5032 0.610785 CACACCTTAAACGCCCCCAT 60.611 55.000 0.00 0.00 0.00 4.00
2936 5033 1.228306 CACACCTTAAACGCCCCCA 60.228 57.895 0.00 0.00 0.00 4.96
2937 5034 1.974875 CCACACCTTAAACGCCCCC 60.975 63.158 0.00 0.00 0.00 5.40
2938 5035 0.824595 AACCACACCTTAAACGCCCC 60.825 55.000 0.00 0.00 0.00 5.80
2939 5036 1.001048 GAAACCACACCTTAAACGCCC 60.001 52.381 0.00 0.00 0.00 6.13
2940 5037 1.677052 TGAAACCACACCTTAAACGCC 59.323 47.619 0.00 0.00 0.00 5.68
2941 5038 2.356695 AGTGAAACCACACCTTAAACGC 59.643 45.455 0.00 0.00 41.12 4.84
2942 5039 5.934935 ATAGTGAAACCACACCTTAAACG 57.065 39.130 0.00 0.00 41.12 3.60
2943 5040 7.308408 GGAGAATAGTGAAACCACACCTTAAAC 60.308 40.741 0.00 0.00 41.12 2.01
2944 5041 6.713450 GGAGAATAGTGAAACCACACCTTAAA 59.287 38.462 0.00 0.00 41.12 1.52
2945 5042 6.235664 GGAGAATAGTGAAACCACACCTTAA 58.764 40.000 0.00 0.00 41.12 1.85
2946 5043 5.280317 GGGAGAATAGTGAAACCACACCTTA 60.280 44.000 0.00 0.00 41.12 2.69
2947 5044 4.506802 GGGAGAATAGTGAAACCACACCTT 60.507 45.833 0.00 0.00 41.12 3.50
2948 5045 3.009143 GGGAGAATAGTGAAACCACACCT 59.991 47.826 0.00 0.00 41.12 4.00
2949 5046 3.244770 TGGGAGAATAGTGAAACCACACC 60.245 47.826 0.00 0.00 41.12 4.16
2950 5047 4.015872 TGGGAGAATAGTGAAACCACAC 57.984 45.455 0.00 0.00 37.80 3.82
2951 5048 4.927267 ATGGGAGAATAGTGAAACCACA 57.073 40.909 0.00 0.00 37.80 4.17
2952 5049 5.105756 CCAAATGGGAGAATAGTGAAACCAC 60.106 44.000 0.00 0.00 40.01 4.16
2953 5050 5.016173 CCAAATGGGAGAATAGTGAAACCA 58.984 41.667 0.00 0.00 40.01 3.67
2954 5051 5.016831 ACCAAATGGGAGAATAGTGAAACC 58.983 41.667 4.17 0.00 41.15 3.27
2955 5052 6.590234 AACCAAATGGGAGAATAGTGAAAC 57.410 37.500 4.17 0.00 41.15 2.78
2956 5053 6.518200 GCAAACCAAATGGGAGAATAGTGAAA 60.518 38.462 4.17 0.00 41.15 2.69
2957 5054 5.047377 GCAAACCAAATGGGAGAATAGTGAA 60.047 40.000 4.17 0.00 41.15 3.18
2958 5055 4.462483 GCAAACCAAATGGGAGAATAGTGA 59.538 41.667 4.17 0.00 41.15 3.41
2959 5056 4.463891 AGCAAACCAAATGGGAGAATAGTG 59.536 41.667 4.17 0.00 41.15 2.74
2960 5057 4.677182 AGCAAACCAAATGGGAGAATAGT 58.323 39.130 4.17 0.00 41.15 2.12
2961 5058 5.888161 ACTAGCAAACCAAATGGGAGAATAG 59.112 40.000 4.17 3.62 41.15 1.73
2962 5059 5.826643 ACTAGCAAACCAAATGGGAGAATA 58.173 37.500 4.17 0.00 41.15 1.75
2963 5060 4.677182 ACTAGCAAACCAAATGGGAGAAT 58.323 39.130 4.17 0.00 41.15 2.40
2964 5061 4.112634 ACTAGCAAACCAAATGGGAGAA 57.887 40.909 4.17 0.00 41.15 2.87
2965 5062 3.806949 ACTAGCAAACCAAATGGGAGA 57.193 42.857 4.17 0.00 41.15 3.71
2966 5063 4.559153 CAAACTAGCAAACCAAATGGGAG 58.441 43.478 4.17 0.00 41.15 4.30
2967 5064 3.244044 GCAAACTAGCAAACCAAATGGGA 60.244 43.478 4.17 0.00 41.15 4.37
2968 5065 3.066380 GCAAACTAGCAAACCAAATGGG 58.934 45.455 4.17 0.00 44.81 4.00
2969 5066 3.726607 TGCAAACTAGCAAACCAAATGG 58.273 40.909 0.00 0.00 42.46 3.16
2980 5077 3.874392 ATTCAACCCATGCAAACTAGC 57.126 42.857 0.00 0.00 0.00 3.42
2981 5078 8.225603 AGTATTATTCAACCCATGCAAACTAG 57.774 34.615 0.00 0.00 0.00 2.57
2982 5079 9.860650 ATAGTATTATTCAACCCATGCAAACTA 57.139 29.630 0.00 0.00 0.00 2.24
2983 5080 8.766994 ATAGTATTATTCAACCCATGCAAACT 57.233 30.769 0.00 0.00 0.00 2.66
2986 5083 9.860650 ACTAATAGTATTATTCAACCCATGCAA 57.139 29.630 3.06 0.00 31.97 4.08
3006 5103 9.661563 CCACCTCACTGTAAACATTTACTAATA 57.338 33.333 14.03 0.00 42.61 0.98
3007 5104 8.380099 TCCACCTCACTGTAAACATTTACTAAT 58.620 33.333 14.03 0.00 42.61 1.73
3008 5105 7.737869 TCCACCTCACTGTAAACATTTACTAA 58.262 34.615 14.03 0.00 42.61 2.24
3009 5106 7.305813 TCCACCTCACTGTAAACATTTACTA 57.694 36.000 14.03 2.61 42.61 1.82
3010 5107 6.182507 TCCACCTCACTGTAAACATTTACT 57.817 37.500 14.03 0.00 42.61 2.24
3011 5108 6.485648 ACTTCCACCTCACTGTAAACATTTAC 59.514 38.462 7.44 7.44 42.51 2.01
3012 5109 6.485313 CACTTCCACCTCACTGTAAACATTTA 59.515 38.462 0.00 0.00 0.00 1.40
3013 5110 5.299279 CACTTCCACCTCACTGTAAACATTT 59.701 40.000 0.00 0.00 0.00 2.32
3014 5111 4.821805 CACTTCCACCTCACTGTAAACATT 59.178 41.667 0.00 0.00 0.00 2.71
3015 5112 4.141482 ACACTTCCACCTCACTGTAAACAT 60.141 41.667 0.00 0.00 0.00 2.71
3016 5113 3.199071 ACACTTCCACCTCACTGTAAACA 59.801 43.478 0.00 0.00 0.00 2.83
3017 5114 3.805207 ACACTTCCACCTCACTGTAAAC 58.195 45.455 0.00 0.00 0.00 2.01
3018 5115 4.497291 AACACTTCCACCTCACTGTAAA 57.503 40.909 0.00 0.00 0.00 2.01
3019 5116 4.080807 TCAAACACTTCCACCTCACTGTAA 60.081 41.667 0.00 0.00 0.00 2.41
3020 5117 3.452990 TCAAACACTTCCACCTCACTGTA 59.547 43.478 0.00 0.00 0.00 2.74
3021 5118 2.238646 TCAAACACTTCCACCTCACTGT 59.761 45.455 0.00 0.00 0.00 3.55
3022 5119 2.614057 GTCAAACACTTCCACCTCACTG 59.386 50.000 0.00 0.00 0.00 3.66
3023 5120 2.238646 TGTCAAACACTTCCACCTCACT 59.761 45.455 0.00 0.00 0.00 3.41
3024 5121 2.639065 TGTCAAACACTTCCACCTCAC 58.361 47.619 0.00 0.00 0.00 3.51
3025 5122 3.576078 ATGTCAAACACTTCCACCTCA 57.424 42.857 0.00 0.00 0.00 3.86
3026 5123 6.575162 AATTATGTCAAACACTTCCACCTC 57.425 37.500 0.00 0.00 0.00 3.85
3027 5124 7.458397 TCTAATTATGTCAAACACTTCCACCT 58.542 34.615 0.00 0.00 0.00 4.00
3028 5125 7.148239 CCTCTAATTATGTCAAACACTTCCACC 60.148 40.741 0.00 0.00 0.00 4.61
3029 5126 7.390718 ACCTCTAATTATGTCAAACACTTCCAC 59.609 37.037 0.00 0.00 0.00 4.02
3030 5127 7.458397 ACCTCTAATTATGTCAAACACTTCCA 58.542 34.615 0.00 0.00 0.00 3.53
3031 5128 7.923414 ACCTCTAATTATGTCAAACACTTCC 57.077 36.000 0.00 0.00 0.00 3.46
3032 5129 9.654663 ACTACCTCTAATTATGTCAAACACTTC 57.345 33.333 0.00 0.00 0.00 3.01
3033 5130 9.436957 CACTACCTCTAATTATGTCAAACACTT 57.563 33.333 0.00 0.00 0.00 3.16
3034 5131 8.812972 TCACTACCTCTAATTATGTCAAACACT 58.187 33.333 0.00 0.00 0.00 3.55
3035 5132 8.997621 TCACTACCTCTAATTATGTCAAACAC 57.002 34.615 0.00 0.00 0.00 3.32
3036 5133 8.258007 CCTCACTACCTCTAATTATGTCAAACA 58.742 37.037 0.00 0.00 0.00 2.83
3037 5134 7.711339 CCCTCACTACCTCTAATTATGTCAAAC 59.289 40.741 0.00 0.00 0.00 2.93
3038 5135 7.402071 ACCCTCACTACCTCTAATTATGTCAAA 59.598 37.037 0.00 0.00 0.00 2.69
3039 5136 6.901300 ACCCTCACTACCTCTAATTATGTCAA 59.099 38.462 0.00 0.00 0.00 3.18
3040 5137 6.441222 ACCCTCACTACCTCTAATTATGTCA 58.559 40.000 0.00 0.00 0.00 3.58
3041 5138 6.015265 GGACCCTCACTACCTCTAATTATGTC 60.015 46.154 0.00 0.00 0.00 3.06
3042 5139 5.839606 GGACCCTCACTACCTCTAATTATGT 59.160 44.000 0.00 0.00 0.00 2.29
3043 5140 6.347859 GGACCCTCACTACCTCTAATTATG 57.652 45.833 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.