Multiple sequence alignment - TraesCS2B01G446100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G446100 chr2B 100.000 4436 0 0 1 4436 638972513 638968078 0.000000e+00 8192
1 TraesCS2B01G446100 chr2A 92.347 2143 102 24 250 2386 679513437 679511351 0.000000e+00 2992
2 TraesCS2B01G446100 chr2A 84.501 871 83 28 2956 3798 679510743 679509897 0.000000e+00 813
3 TraesCS2B01G446100 chr2A 87.149 498 46 14 3944 4436 679509885 679509401 2.330000e-152 549
4 TraesCS2B01G446100 chr2A 95.510 245 11 0 2637 2881 679511086 679510842 4.160000e-105 392
5 TraesCS2B01G446100 chr2D 90.693 2020 120 35 568 2564 536922469 536920495 0.000000e+00 2627
6 TraesCS2B01G446100 chr2D 82.719 868 90 30 2956 3798 536920066 536919234 0.000000e+00 717
7 TraesCS2B01G446100 chr2D 89.474 513 20 11 1 510 536922973 536922492 6.300000e-173 617
8 TraesCS2B01G446100 chr2D 87.783 442 45 8 3997 4436 536919185 536918751 3.960000e-140 508
9 TraesCS2B01G446100 chr2D 94.694 245 13 0 2637 2881 536920402 536920158 9.000000e-102 381
10 TraesCS2B01G446100 chr2D 79.894 378 58 16 1811 2179 87981996 87981628 1.220000e-65 261
11 TraesCS2B01G446100 chr2D 73.849 543 117 17 1453 1987 56581427 56581952 4.530000e-45 193
12 TraesCS2B01G446100 chr5B 90.404 396 38 0 1317 1712 246223012 246222617 5.080000e-144 521
13 TraesCS2B01G446100 chr5B 94.898 196 9 1 1318 1512 246180325 246180130 5.570000e-79 305
14 TraesCS2B01G446100 chr5B 93.860 114 6 1 3800 3913 115399230 115399118 2.120000e-38 171
15 TraesCS2B01G446100 chr3A 92.135 356 27 1 1317 1671 272768192 272767837 6.620000e-138 501
16 TraesCS2B01G446100 chr3A 95.413 109 5 0 3804 3912 482063128 482063236 1.640000e-39 174
17 TraesCS2B01G446100 chr7A 79.466 487 83 11 1325 1804 675229850 675230326 3.310000e-86 329
18 TraesCS2B01G446100 chr7A 81.053 380 56 14 1808 2179 675230415 675230786 5.610000e-74 289
19 TraesCS2B01G446100 chr7A 78.701 385 65 15 1811 2186 630247514 630247138 1.590000e-59 241
20 TraesCS2B01G446100 chr7A 76.344 372 73 13 1816 2179 305700398 305700034 7.580000e-43 185
21 TraesCS2B01G446100 chr7A 95.413 109 5 0 3808 3916 538102632 538102524 1.640000e-39 174
22 TraesCS2B01G446100 chr7B 79.296 483 81 16 1325 1799 653019618 653019147 1.990000e-83 320
23 TraesCS2B01G446100 chr7B 75.758 561 99 30 1811 2355 653019042 653018503 9.530000e-62 248
24 TraesCS2B01G446100 chr7D 78.659 492 92 11 1325 1809 92810124 92809639 9.260000e-82 315
25 TraesCS2B01G446100 chr7D 80.679 383 58 14 1811 2185 584855165 584854791 2.610000e-72 283
26 TraesCS2B01G446100 chr7D 80.469 384 57 16 1811 2185 92809550 92809176 1.220000e-70 278
27 TraesCS2B01G446100 chr7D 96.330 109 4 0 3805 3913 426778563 426778671 3.530000e-41 180
28 TraesCS2B01G446100 chr6B 84.470 264 38 3 1544 1805 173904694 173904956 1.580000e-64 257
29 TraesCS2B01G446100 chr6B 92.500 120 8 1 3801 3920 520852319 520852437 2.120000e-38 171
30 TraesCS2B01G446100 chr3B 95.833 120 3 2 3793 3912 158717317 158717200 4.530000e-45 193
31 TraesCS2B01G446100 chr5A 95.763 118 4 1 3796 3913 512233461 512233577 5.860000e-44 189
32 TraesCS2B01G446100 chr6D 92.063 126 6 3 3797 3918 79857221 79857096 1.640000e-39 174
33 TraesCS2B01G446100 chr3D 93.966 116 5 1 3805 3918 461204829 461204714 1.640000e-39 174
34 TraesCS2B01G446100 chr1B 79.717 212 32 10 1961 2167 621201991 621202196 4.630000e-30 143
35 TraesCS2B01G446100 chr4D 92.000 75 6 0 1317 1391 289299513 289299587 6.070000e-19 106
36 TraesCS2B01G446100 chr4D 96.774 62 2 0 1445 1506 344366557 344366618 2.180000e-18 104


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G446100 chr2B 638968078 638972513 4435 True 8192.0 8192 100.00000 1 4436 1 chr2B.!!$R1 4435
1 TraesCS2B01G446100 chr2A 679509401 679513437 4036 True 1186.5 2992 89.87675 250 4436 4 chr2A.!!$R1 4186
2 TraesCS2B01G446100 chr2D 536918751 536922973 4222 True 970.0 2627 89.07260 1 4436 5 chr2D.!!$R2 4435
3 TraesCS2B01G446100 chr7A 675229850 675230786 936 False 309.0 329 80.25950 1325 2179 2 chr7A.!!$F1 854
4 TraesCS2B01G446100 chr7B 653018503 653019618 1115 True 284.0 320 77.52700 1325 2355 2 chr7B.!!$R1 1030
5 TraesCS2B01G446100 chr7D 92809176 92810124 948 True 296.5 315 79.56400 1325 2185 2 chr7D.!!$R2 860

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
558 562 0.178998 CTCATGGAGAAGGGGCATGG 60.179 60.0 0.0 0.0 0.0 3.66 F
560 564 0.481567 CATGGAGAAGGGGCATGGAT 59.518 55.0 0.0 0.0 0.0 3.41 F
561 565 0.776176 ATGGAGAAGGGGCATGGATC 59.224 55.0 0.0 0.0 0.0 3.36 F
2542 2686 0.517316 GTTGGCGCGATGAAAAGACT 59.483 50.0 12.1 0.0 0.0 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2194 2314 0.107945 GAGAAGCCACCAAGCTCGAT 60.108 55.0 0.0 0.0 44.11 3.59 R
2542 2686 0.676466 CCTTGCAGGCGGTGATGTTA 60.676 55.0 0.0 0.0 0.00 2.41 R
2570 2714 5.128663 TCTGAACTATGAATGTCGGATTGGA 59.871 40.0 0.0 0.0 0.00 3.53 R
3897 4151 0.039180 TCTGCTACTCCCTCGGTTCA 59.961 55.0 0.0 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 6.112734 TGTTAGGTAGCATATGGAAACTGTG 58.887 40.000 4.56 0.00 0.00 3.66
52 53 2.506644 TGTGATGCAGATCCTGGAATGA 59.493 45.455 14.50 2.89 35.08 2.57
55 56 4.023107 GTGATGCAGATCCTGGAATGAATG 60.023 45.833 14.50 4.96 35.08 2.67
62 63 5.831525 CAGATCCTGGAATGAATGAATCCAA 59.168 40.000 0.00 0.00 42.41 3.53
96 97 6.036577 TCTACTCATGTGCACAACAGATTA 57.963 37.500 25.72 17.52 43.64 1.75
178 179 2.682856 ACACTGACACTGAATTTTGCGT 59.317 40.909 0.00 0.00 0.00 5.24
185 186 5.703592 TGACACTGAATTTTGCGTAACCTAT 59.296 36.000 0.00 0.00 0.00 2.57
192 193 6.864165 TGAATTTTGCGTAACCTATTTGAACC 59.136 34.615 0.00 0.00 0.00 3.62
200 201 6.128117 GCGTAACCTATTTGAACCTTTCATGA 60.128 38.462 0.00 0.00 39.84 3.07
201 202 7.574217 GCGTAACCTATTTGAACCTTTCATGAA 60.574 37.037 3.38 3.38 39.84 2.57
202 203 7.749126 CGTAACCTATTTGAACCTTTCATGAAC 59.251 37.037 7.89 0.00 39.84 3.18
203 204 7.839680 AACCTATTTGAACCTTTCATGAACT 57.160 32.000 7.89 0.00 39.84 3.01
204 205 7.454260 ACCTATTTGAACCTTTCATGAACTC 57.546 36.000 7.89 3.60 39.84 3.01
205 206 7.004086 ACCTATTTGAACCTTTCATGAACTCA 58.996 34.615 7.89 6.17 39.84 3.41
206 207 7.175641 ACCTATTTGAACCTTTCATGAACTCAG 59.824 37.037 7.89 3.01 39.84 3.35
207 208 6.966534 ATTTGAACCTTTCATGAACTCAGT 57.033 33.333 7.89 0.34 39.84 3.41
208 209 6.773976 TTTGAACCTTTCATGAACTCAGTT 57.226 33.333 7.89 9.19 39.84 3.16
209 210 6.377327 TTGAACCTTTCATGAACTCAGTTC 57.623 37.500 21.11 21.11 39.84 3.01
210 211 5.684704 TGAACCTTTCATGAACTCAGTTCT 58.315 37.500 24.64 1.63 37.81 3.01
211 212 6.122277 TGAACCTTTCATGAACTCAGTTCTT 58.878 36.000 24.64 9.56 37.81 2.52
212 213 6.260936 TGAACCTTTCATGAACTCAGTTCTTC 59.739 38.462 24.64 11.09 37.81 2.87
213 214 5.684704 ACCTTTCATGAACTCAGTTCTTCA 58.315 37.500 18.49 0.00 42.39 3.02
214 215 6.302269 ACCTTTCATGAACTCAGTTCTTCAT 58.698 36.000 18.49 1.77 42.39 2.57
215 216 7.453393 ACCTTTCATGAACTCAGTTCTTCATA 58.547 34.615 18.49 0.00 42.39 2.15
247 248 3.531934 TGTCAGATGATGTGCTCGAAT 57.468 42.857 0.00 0.00 0.00 3.34
300 304 3.378427 CCTTATTAAGCAGCCACCAGAAC 59.622 47.826 0.00 0.00 0.00 3.01
326 330 6.829849 CCATTTAATTATCATGGCTTGGGTT 58.170 36.000 10.02 0.00 31.32 4.11
336 340 2.672098 TGGCTTGGGTTGTTGTGTTAT 58.328 42.857 0.00 0.00 0.00 1.89
375 379 4.762765 GGATCGGATCTGATGTGTAGTAGT 59.237 45.833 21.91 0.00 0.00 2.73
376 380 5.938710 GGATCGGATCTGATGTGTAGTAGTA 59.061 44.000 21.91 0.00 0.00 1.82
377 381 6.092944 GGATCGGATCTGATGTGTAGTAGTAG 59.907 46.154 21.91 0.00 0.00 2.57
378 382 5.306394 TCGGATCTGATGTGTAGTAGTAGG 58.694 45.833 0.00 0.00 0.00 3.18
379 383 5.071384 TCGGATCTGATGTGTAGTAGTAGGA 59.929 44.000 0.00 0.00 0.00 2.94
380 384 5.410132 CGGATCTGATGTGTAGTAGTAGGAG 59.590 48.000 0.00 0.00 0.00 3.69
381 385 6.300703 GGATCTGATGTGTAGTAGTAGGAGT 58.699 44.000 0.00 0.00 0.00 3.85
382 386 7.451732 GGATCTGATGTGTAGTAGTAGGAGTA 58.548 42.308 0.00 0.00 0.00 2.59
383 387 7.604927 GGATCTGATGTGTAGTAGTAGGAGTAG 59.395 44.444 0.00 0.00 0.00 2.57
415 419 2.101750 TGAGTTGTTCTTGGCACGTCTA 59.898 45.455 0.00 0.00 0.00 2.59
432 436 3.383505 CGTCTACCTGATGTATCCCACAA 59.616 47.826 0.00 0.00 41.55 3.33
500 504 1.037579 GCTGGTTGGTTAGGGCATCC 61.038 60.000 0.00 0.00 0.00 3.51
512 516 2.495866 GCATCCCCAATGGCAACG 59.504 61.111 0.00 0.00 42.51 4.10
513 517 2.051518 GCATCCCCAATGGCAACGA 61.052 57.895 0.00 0.00 42.51 3.85
514 518 1.809207 CATCCCCAATGGCAACGAC 59.191 57.895 0.00 0.00 42.51 4.34
515 519 0.680921 CATCCCCAATGGCAACGACT 60.681 55.000 0.00 0.00 42.51 4.18
516 520 0.680921 ATCCCCAATGGCAACGACTG 60.681 55.000 0.00 0.00 42.51 3.51
517 521 1.303236 CCCCAATGGCAACGACTGA 60.303 57.895 0.00 0.00 42.51 3.41
518 522 1.586154 CCCCAATGGCAACGACTGAC 61.586 60.000 0.00 0.00 42.51 3.51
519 523 1.586154 CCCAATGGCAACGACTGACC 61.586 60.000 0.00 0.00 42.51 4.02
520 524 1.586154 CCAATGGCAACGACTGACCC 61.586 60.000 0.00 0.00 42.51 4.46
521 525 1.303317 AATGGCAACGACTGACCCC 60.303 57.895 0.00 0.00 42.51 4.95
522 526 2.063015 AATGGCAACGACTGACCCCA 62.063 55.000 0.00 0.00 42.51 4.96
523 527 2.063015 ATGGCAACGACTGACCCCAA 62.063 55.000 0.00 0.00 42.51 4.12
524 528 2.258726 GGCAACGACTGACCCCAAC 61.259 63.158 0.00 0.00 0.00 3.77
525 529 2.258726 GCAACGACTGACCCCAACC 61.259 63.158 0.00 0.00 0.00 3.77
526 530 1.147376 CAACGACTGACCCCAACCA 59.853 57.895 0.00 0.00 0.00 3.67
527 531 0.250727 CAACGACTGACCCCAACCAT 60.251 55.000 0.00 0.00 0.00 3.55
550 554 2.489722 TGTCACGACTCTCATGGAGAAG 59.510 50.000 15.51 11.31 44.45 2.85
551 555 2.095461 TCACGACTCTCATGGAGAAGG 58.905 52.381 15.51 8.07 44.45 3.46
552 556 1.135915 CACGACTCTCATGGAGAAGGG 59.864 57.143 15.51 7.84 44.45 3.95
553 557 0.749649 CGACTCTCATGGAGAAGGGG 59.250 60.000 15.51 0.00 44.45 4.79
554 558 0.467804 GACTCTCATGGAGAAGGGGC 59.532 60.000 15.51 0.00 44.45 5.80
555 559 0.252881 ACTCTCATGGAGAAGGGGCA 60.253 55.000 15.51 0.00 44.45 5.36
556 560 1.138568 CTCTCATGGAGAAGGGGCAT 58.861 55.000 5.53 0.00 44.45 4.40
557 561 0.841961 TCTCATGGAGAAGGGGCATG 59.158 55.000 0.00 0.00 35.59 4.06
558 562 0.178998 CTCATGGAGAAGGGGCATGG 60.179 60.000 0.00 0.00 0.00 3.66
560 564 0.481567 CATGGAGAAGGGGCATGGAT 59.518 55.000 0.00 0.00 0.00 3.41
561 565 0.776176 ATGGAGAAGGGGCATGGATC 59.224 55.000 0.00 0.00 0.00 3.36
562 566 1.072159 GGAGAAGGGGCATGGATCG 59.928 63.158 0.00 0.00 0.00 3.69
563 567 1.599240 GAGAAGGGGCATGGATCGC 60.599 63.158 0.00 0.00 0.00 4.58
640 648 3.499048 GAAGCAAGCAATGTCACATCTG 58.501 45.455 0.00 0.00 0.00 2.90
641 649 2.786777 AGCAAGCAATGTCACATCTGA 58.213 42.857 0.00 0.00 0.00 3.27
642 650 2.747989 AGCAAGCAATGTCACATCTGAG 59.252 45.455 0.00 0.00 0.00 3.35
643 651 2.486982 GCAAGCAATGTCACATCTGAGT 59.513 45.455 0.00 0.00 0.00 3.41
644 652 3.686241 GCAAGCAATGTCACATCTGAGTA 59.314 43.478 0.00 0.00 0.00 2.59
660 670 9.692325 ACATCTGAGTATATCATATAGTGCTCA 57.308 33.333 0.00 1.01 37.28 4.26
699 709 2.072298 CTTTTTAGCAGACTCGCAGCT 58.928 47.619 0.00 0.00 42.51 4.24
752 762 6.308371 TCATCTTGTATAGCGACATAACGA 57.692 37.500 0.00 0.00 35.09 3.85
759 769 7.815398 TGTATAGCGACATAACGAAGAAAAA 57.185 32.000 0.00 0.00 35.09 1.94
765 775 7.305474 AGCGACATAACGAAGAAAAATTCAAT 58.695 30.769 0.00 0.00 35.09 2.57
836 846 5.249622 TCCCCCAAAATGTTTTTATTCTCCC 59.750 40.000 0.00 0.00 0.00 4.30
871 881 8.475331 TTCCTATGAAAAACTCGTAATCTGAC 57.525 34.615 0.00 0.00 0.00 3.51
872 882 6.750501 TCCTATGAAAAACTCGTAATCTGACG 59.249 38.462 0.00 0.00 44.29 4.35
961 973 5.559417 GCCACGAAATTTTCTACAAGAACGA 60.559 40.000 7.50 0.00 33.26 3.85
962 974 6.071463 CCACGAAATTTTCTACAAGAACGAG 58.929 40.000 7.50 0.00 33.26 4.18
975 987 0.892063 GAACGAGGAGGAAGCAGAGT 59.108 55.000 0.00 0.00 0.00 3.24
976 988 1.273886 GAACGAGGAGGAAGCAGAGTT 59.726 52.381 0.00 0.00 0.00 3.01
977 989 2.217510 ACGAGGAGGAAGCAGAGTTA 57.782 50.000 0.00 0.00 0.00 2.24
978 990 2.096248 ACGAGGAGGAAGCAGAGTTAG 58.904 52.381 0.00 0.00 0.00 2.34
979 991 2.291024 ACGAGGAGGAAGCAGAGTTAGA 60.291 50.000 0.00 0.00 0.00 2.10
980 992 2.098443 CGAGGAGGAAGCAGAGTTAGAC 59.902 54.545 0.00 0.00 0.00 2.59
981 993 3.361786 GAGGAGGAAGCAGAGTTAGACT 58.638 50.000 0.00 0.00 0.00 3.24
1035 1047 4.115199 GGGCATGCGAAGAGGGGT 62.115 66.667 12.44 0.00 0.00 4.95
1809 1929 4.235762 ATCAACCGCGGCCGCTAT 62.236 61.111 43.60 30.39 39.32 2.97
2185 2305 3.524648 AACGTGCAGTACCGGGGTG 62.525 63.158 6.32 0.14 0.00 4.61
2191 2311 1.817881 CAGTACCGGGGTGCGAATA 59.182 57.895 6.32 0.00 35.88 1.75
2194 2314 1.752310 TACCGGGGTGCGAATACGA 60.752 57.895 6.32 0.00 42.66 3.43
2223 2343 2.108075 TGGTGGCTTCTCCTGATTTCAA 59.892 45.455 0.00 0.00 35.26 2.69
2224 2344 2.489722 GGTGGCTTCTCCTGATTTCAAC 59.510 50.000 0.00 0.00 35.26 3.18
2225 2345 3.149196 GTGGCTTCTCCTGATTTCAACA 58.851 45.455 0.00 0.00 35.26 3.33
2369 2504 3.004024 GTCTGCATGACACAAGGTTTG 57.996 47.619 0.00 0.00 44.73 2.93
2382 2518 4.744631 CACAAGGTTTGCATTTACAACCTC 59.255 41.667 17.88 0.00 33.04 3.85
2387 2523 4.923281 GGTTTGCATTTACAACCTCATCAC 59.077 41.667 9.55 0.00 0.00 3.06
2389 2525 4.764679 TGCATTTACAACCTCATCACAC 57.235 40.909 0.00 0.00 0.00 3.82
2390 2526 4.397420 TGCATTTACAACCTCATCACACT 58.603 39.130 0.00 0.00 0.00 3.55
2391 2527 4.826733 TGCATTTACAACCTCATCACACTT 59.173 37.500 0.00 0.00 0.00 3.16
2404 2547 2.997980 TCACACTTGCTGTTTTCCTGA 58.002 42.857 0.00 0.00 0.00 3.86
2405 2548 3.554934 TCACACTTGCTGTTTTCCTGAT 58.445 40.909 0.00 0.00 0.00 2.90
2406 2549 3.565482 TCACACTTGCTGTTTTCCTGATC 59.435 43.478 0.00 0.00 0.00 2.92
2409 2552 2.549754 ACTTGCTGTTTTCCTGATCGTG 59.450 45.455 0.00 0.00 0.00 4.35
2427 2570 2.222886 CGTGGATCGCTTCATTTCACTG 60.223 50.000 0.00 0.00 0.00 3.66
2428 2571 2.744202 GTGGATCGCTTCATTTCACTGT 59.256 45.455 0.00 0.00 0.00 3.55
2434 2577 3.876914 TCGCTTCATTTCACTGTTTCTGT 59.123 39.130 0.00 0.00 0.00 3.41
2445 2588 5.182487 TCACTGTTTCTGTTCACTGCTAAA 58.818 37.500 0.00 0.00 0.00 1.85
2447 2590 6.017934 TCACTGTTTCTGTTCACTGCTAAATC 60.018 38.462 0.00 0.00 0.00 2.17
2448 2591 5.050091 ACTGTTTCTGTTCACTGCTAAATCG 60.050 40.000 0.00 0.00 0.00 3.34
2449 2592 5.053811 TGTTTCTGTTCACTGCTAAATCGA 58.946 37.500 0.00 0.00 0.00 3.59
2450 2593 5.700832 TGTTTCTGTTCACTGCTAAATCGAT 59.299 36.000 0.00 0.00 0.00 3.59
2451 2594 6.128553 TGTTTCTGTTCACTGCTAAATCGATC 60.129 38.462 0.00 0.00 0.00 3.69
2452 2595 5.072040 TCTGTTCACTGCTAAATCGATCA 57.928 39.130 0.00 0.00 0.00 2.92
2453 2596 4.864806 TCTGTTCACTGCTAAATCGATCAC 59.135 41.667 0.00 0.00 0.00 3.06
2455 2598 4.994217 TGTTCACTGCTAAATCGATCACAA 59.006 37.500 0.00 0.00 0.00 3.33
2456 2599 5.468409 TGTTCACTGCTAAATCGATCACAAA 59.532 36.000 0.00 0.00 0.00 2.83
2457 2600 6.149308 TGTTCACTGCTAAATCGATCACAAAT 59.851 34.615 0.00 0.00 0.00 2.32
2458 2601 6.741992 TCACTGCTAAATCGATCACAAATT 57.258 33.333 0.00 0.00 0.00 1.82
2459 2602 6.775088 TCACTGCTAAATCGATCACAAATTC 58.225 36.000 0.00 0.00 0.00 2.17
2460 2603 5.674148 CACTGCTAAATCGATCACAAATTCG 59.326 40.000 0.00 0.00 36.72 3.34
2461 2604 4.587306 TGCTAAATCGATCACAAATTCGC 58.413 39.130 0.00 0.00 35.39 4.70
2462 2605 4.094146 TGCTAAATCGATCACAAATTCGCA 59.906 37.500 0.00 0.00 35.39 5.10
2467 2610 4.520743 TCGATCACAAATTCGCAATCTC 57.479 40.909 0.00 0.00 35.39 2.75
2474 2617 5.580691 TCACAAATTCGCAATCTCTACGATT 59.419 36.000 0.00 0.00 43.03 3.34
2476 2619 7.276878 TCACAAATTCGCAATCTCTACGATTTA 59.723 33.333 0.00 0.00 40.33 1.40
2477 2620 7.370836 CACAAATTCGCAATCTCTACGATTTAC 59.629 37.037 0.00 0.00 40.33 2.01
2485 2629 6.201806 GCAATCTCTACGATTTACTTGCAGAT 59.798 38.462 0.00 0.00 40.33 2.90
2524 2668 3.041701 CACAACAATGGCGGCTGT 58.958 55.556 11.43 3.94 0.00 4.40
2536 2680 3.430862 GGCTGTTGGCGCGATGAA 61.431 61.111 12.10 0.00 42.94 2.57
2542 2686 0.517316 GTTGGCGCGATGAAAAGACT 59.483 50.000 12.10 0.00 0.00 3.24
2580 2776 5.290386 CAAGGTAGTATCTTCCAATCCGAC 58.710 45.833 0.00 0.00 0.00 4.79
2586 2782 6.179906 AGTATCTTCCAATCCGACATTCAT 57.820 37.500 0.00 0.00 0.00 2.57
2588 2784 7.382110 AGTATCTTCCAATCCGACATTCATAG 58.618 38.462 0.00 0.00 0.00 2.23
2589 2785 5.614324 TCTTCCAATCCGACATTCATAGT 57.386 39.130 0.00 0.00 0.00 2.12
2590 2786 5.989477 TCTTCCAATCCGACATTCATAGTT 58.011 37.500 0.00 0.00 0.00 2.24
2592 2788 5.351948 TCCAATCCGACATTCATAGTTCA 57.648 39.130 0.00 0.00 0.00 3.18
2593 2789 5.359756 TCCAATCCGACATTCATAGTTCAG 58.640 41.667 0.00 0.00 0.00 3.02
2594 2790 5.128663 TCCAATCCGACATTCATAGTTCAGA 59.871 40.000 0.00 0.00 0.00 3.27
2597 2793 4.998788 TCCGACATTCATAGTTCAGACAG 58.001 43.478 0.00 0.00 0.00 3.51
2598 2794 4.705023 TCCGACATTCATAGTTCAGACAGA 59.295 41.667 0.00 0.00 0.00 3.41
2599 2795 5.360999 TCCGACATTCATAGTTCAGACAGAT 59.639 40.000 0.00 0.00 0.00 2.90
2600 2796 5.461407 CCGACATTCATAGTTCAGACAGATG 59.539 44.000 0.00 0.00 0.00 2.90
2604 2800 8.261492 ACATTCATAGTTCAGACAGATGAAAC 57.739 34.615 9.46 0.00 40.60 2.78
2605 2801 7.879677 ACATTCATAGTTCAGACAGATGAAACA 59.120 33.333 9.46 0.00 40.60 2.83
2606 2802 8.724229 CATTCATAGTTCAGACAGATGAAACAA 58.276 33.333 9.46 0.00 40.60 2.83
2607 2803 7.658179 TCATAGTTCAGACAGATGAAACAAC 57.342 36.000 0.00 0.00 40.72 3.32
2609 2805 7.714813 TCATAGTTCAGACAGATGAAACAACAA 59.285 33.333 0.00 0.00 40.72 2.83
2610 2806 6.369059 AGTTCAGACAGATGAAACAACAAG 57.631 37.500 0.00 0.00 40.72 3.16
2612 2808 5.034852 TCAGACAGATGAAACAACAAGGA 57.965 39.130 0.00 0.00 0.00 3.36
2613 2809 5.059161 TCAGACAGATGAAACAACAAGGAG 58.941 41.667 0.00 0.00 0.00 3.69
2614 2810 4.818546 CAGACAGATGAAACAACAAGGAGT 59.181 41.667 0.00 0.00 0.00 3.85
2615 2811 5.991606 CAGACAGATGAAACAACAAGGAGTA 59.008 40.000 0.00 0.00 0.00 2.59
2616 2812 5.992217 AGACAGATGAAACAACAAGGAGTAC 59.008 40.000 0.00 0.00 0.00 2.73
2617 2813 4.750098 ACAGATGAAACAACAAGGAGTACG 59.250 41.667 0.00 0.00 0.00 3.67
2618 2814 4.988540 CAGATGAAACAACAAGGAGTACGA 59.011 41.667 0.00 0.00 0.00 3.43
2619 2815 5.639506 CAGATGAAACAACAAGGAGTACGAT 59.360 40.000 0.00 0.00 0.00 3.73
2620 2816 6.147821 CAGATGAAACAACAAGGAGTACGATT 59.852 38.462 0.00 0.00 0.00 3.34
2622 2818 6.295039 TGAAACAACAAGGAGTACGATTTC 57.705 37.500 0.00 0.00 0.00 2.17
2624 2820 4.247267 ACAACAAGGAGTACGATTTCGA 57.753 40.909 7.01 0.00 43.02 3.71
2625 2821 4.624015 ACAACAAGGAGTACGATTTCGAA 58.376 39.130 7.01 0.00 43.02 3.71
2626 2822 4.446719 ACAACAAGGAGTACGATTTCGAAC 59.553 41.667 7.01 0.00 43.02 3.95
2627 2823 4.247267 ACAAGGAGTACGATTTCGAACA 57.753 40.909 7.01 0.00 43.02 3.18
2628 2824 3.985925 ACAAGGAGTACGATTTCGAACAC 59.014 43.478 7.01 2.06 43.02 3.32
2630 2826 2.227388 AGGAGTACGATTTCGAACACGT 59.773 45.455 24.49 24.49 43.02 4.49
2631 2827 2.982470 GGAGTACGATTTCGAACACGTT 59.018 45.455 25.63 14.17 43.02 3.99
2632 2828 3.181546 GGAGTACGATTTCGAACACGTTG 60.182 47.826 25.63 8.73 43.02 4.10
2633 2829 3.374745 AGTACGATTTCGAACACGTTGT 58.625 40.909 25.63 14.98 43.02 3.32
2634 2830 4.536065 AGTACGATTTCGAACACGTTGTA 58.464 39.130 25.63 12.23 43.02 2.41
2635 2831 5.156355 AGTACGATTTCGAACACGTTGTAT 58.844 37.500 25.63 12.24 43.02 2.29
2657 2853 2.280552 GCAGGACACGTACAGGGGA 61.281 63.158 0.00 0.00 0.00 4.81
2861 3057 3.400054 GGGTTCAGGGGAGACGGG 61.400 72.222 0.00 0.00 0.00 5.28
2897 3093 3.337889 TGCGCGTGACTTGCTCAC 61.338 61.111 8.43 0.00 45.38 3.51
2899 3095 1.733041 GCGCGTGACTTGCTCACTA 60.733 57.895 8.43 0.00 46.50 2.74
2904 3100 1.979469 CGTGACTTGCTCACTAGTTCG 59.021 52.381 0.00 0.00 46.50 3.95
2908 3104 1.067495 ACTTGCTCACTAGTTCGCCTC 60.067 52.381 9.89 0.00 0.00 4.70
2909 3105 0.109272 TTGCTCACTAGTTCGCCTCG 60.109 55.000 9.89 0.00 0.00 4.63
2910 3106 1.226717 GCTCACTAGTTCGCCTCGG 60.227 63.158 0.00 0.00 0.00 4.63
2911 3107 1.226717 CTCACTAGTTCGCCTCGGC 60.227 63.158 0.00 0.00 37.85 5.54
2912 3108 2.202756 CACTAGTTCGCCTCGGCC 60.203 66.667 1.72 0.00 37.98 6.13
2913 3109 2.362632 ACTAGTTCGCCTCGGCCT 60.363 61.111 0.00 0.00 37.98 5.19
2926 3122 4.783621 GGCCTCACCGCATCTGCA 62.784 66.667 0.00 0.00 42.21 4.41
2927 3123 2.747460 GCCTCACCGCATCTGCAA 60.747 61.111 2.72 0.00 42.21 4.08
2928 3124 2.117156 GCCTCACCGCATCTGCAAT 61.117 57.895 2.72 0.00 42.21 3.56
2930 3126 0.813184 CCTCACCGCATCTGCAATTT 59.187 50.000 2.72 0.00 42.21 1.82
2931 3127 1.202222 CCTCACCGCATCTGCAATTTC 60.202 52.381 2.72 0.00 42.21 2.17
2932 3128 1.741706 CTCACCGCATCTGCAATTTCT 59.258 47.619 2.72 0.00 42.21 2.52
2934 3130 1.469703 CACCGCATCTGCAATTTCTGA 59.530 47.619 2.72 0.00 42.21 3.27
2936 3132 1.469703 CCGCATCTGCAATTTCTGACA 59.530 47.619 2.72 0.00 42.21 3.58
2937 3133 2.095110 CCGCATCTGCAATTTCTGACAA 60.095 45.455 2.72 0.00 42.21 3.18
2938 3134 3.567530 CGCATCTGCAATTTCTGACAAA 58.432 40.909 2.72 0.00 42.21 2.83
2939 3135 3.982701 CGCATCTGCAATTTCTGACAAAA 59.017 39.130 2.72 0.00 42.21 2.44
2940 3136 4.143473 CGCATCTGCAATTTCTGACAAAAC 60.143 41.667 2.72 0.00 42.21 2.43
2942 3138 3.963665 TCTGCAATTTCTGACAAAACGG 58.036 40.909 0.00 0.00 0.00 4.44
2944 3140 3.443037 TGCAATTTCTGACAAAACGGTG 58.557 40.909 0.00 0.00 0.00 4.94
2947 3143 4.420168 CAATTTCTGACAAAACGGTGTGT 58.580 39.130 0.00 0.00 0.00 3.72
2948 3144 4.712122 ATTTCTGACAAAACGGTGTGTT 57.288 36.364 0.00 0.00 44.59 3.32
2949 3145 3.750639 TTCTGACAAAACGGTGTGTTC 57.249 42.857 0.00 0.00 40.84 3.18
2950 3146 2.980568 TCTGACAAAACGGTGTGTTCT 58.019 42.857 0.00 0.00 40.84 3.01
2951 3147 2.933906 TCTGACAAAACGGTGTGTTCTC 59.066 45.455 0.00 0.00 40.84 2.87
2953 3149 1.662122 GACAAAACGGTGTGTTCTCGT 59.338 47.619 0.00 0.00 40.84 4.18
2960 3184 1.298859 GGTGTGTTCTCGTGGCCATC 61.299 60.000 9.72 1.29 0.00 3.51
2989 3213 3.184683 CGAGTGCAGCGAGAAGGC 61.185 66.667 2.92 0.00 0.00 4.35
3104 3328 2.112297 GACACCTGCGTGGGGAAA 59.888 61.111 4.73 0.00 43.63 3.13
3211 3435 2.022918 AGTACAGGCTCAGGGTAAGGAT 60.023 50.000 0.00 0.00 0.00 3.24
3212 3436 1.207791 ACAGGCTCAGGGTAAGGATG 58.792 55.000 0.00 0.00 0.00 3.51
3217 3441 1.069978 GCTCAGGGTAAGGATGAGAGC 59.930 57.143 5.65 0.00 42.48 4.09
3219 3443 2.364970 CTCAGGGTAAGGATGAGAGCTG 59.635 54.545 0.00 0.00 42.48 4.24
3220 3444 2.023984 TCAGGGTAAGGATGAGAGCTGA 60.024 50.000 0.00 0.00 0.00 4.26
3221 3445 2.768527 CAGGGTAAGGATGAGAGCTGAA 59.231 50.000 0.00 0.00 0.00 3.02
3222 3446 3.198635 CAGGGTAAGGATGAGAGCTGAAA 59.801 47.826 0.00 0.00 0.00 2.69
3223 3447 3.846588 AGGGTAAGGATGAGAGCTGAAAA 59.153 43.478 0.00 0.00 0.00 2.29
3224 3448 4.080638 AGGGTAAGGATGAGAGCTGAAAAG 60.081 45.833 0.00 0.00 0.00 2.27
3251 3475 1.208052 CAGCCTCCTCCATCTCGAAAA 59.792 52.381 0.00 0.00 0.00 2.29
3253 3477 1.474143 GCCTCCTCCATCTCGAAAAGG 60.474 57.143 0.00 0.00 0.00 3.11
3254 3478 1.139853 CCTCCTCCATCTCGAAAAGGG 59.860 57.143 0.00 0.00 0.00 3.95
3257 3481 1.373570 CTCCATCTCGAAAAGGGTGC 58.626 55.000 0.00 0.00 0.00 5.01
3258 3482 0.035439 TCCATCTCGAAAAGGGTGCC 60.035 55.000 0.00 0.00 0.00 5.01
3259 3483 1.032114 CCATCTCGAAAAGGGTGCCC 61.032 60.000 0.00 0.00 0.00 5.36
3298 3523 1.280133 CTGGATCTTCCTTGGCTGACA 59.720 52.381 0.00 0.00 37.46 3.58
3301 3526 2.948315 GGATCTTCCTTGGCTGACAATC 59.052 50.000 0.00 0.00 38.65 2.67
3316 3545 6.647895 GGCTGACAATCAAATGAAAAATCTGT 59.352 34.615 0.00 0.00 0.00 3.41
3389 3618 1.301716 TGGAAAGCCAGAGCACGAC 60.302 57.895 0.00 0.00 43.56 4.34
3438 3667 1.091771 CCGTGGAAGCAGCATAGGTG 61.092 60.000 0.00 0.00 0.00 4.00
3458 3694 3.701040 GTGGCCAGGTAATGAATGAATGT 59.299 43.478 5.11 0.00 0.00 2.71
3462 3703 5.278660 GGCCAGGTAATGAATGAATGTCATC 60.279 44.000 0.00 0.00 35.76 2.92
3498 3743 6.939163 GCATCATAAATCTCTTAGGTGGTGAT 59.061 38.462 0.00 0.00 0.00 3.06
3500 3745 9.347240 CATCATAAATCTCTTAGGTGGTGATTT 57.653 33.333 0.00 0.00 39.03 2.17
3501 3746 8.964476 TCATAAATCTCTTAGGTGGTGATTTC 57.036 34.615 0.00 0.00 37.73 2.17
3502 3747 8.548025 TCATAAATCTCTTAGGTGGTGATTTCA 58.452 33.333 0.00 0.00 37.73 2.69
3503 3748 8.834465 CATAAATCTCTTAGGTGGTGATTTCAG 58.166 37.037 0.00 0.00 37.73 3.02
3511 3756 2.814336 GGTGGTGATTTCAGAGGTGTTC 59.186 50.000 0.00 0.00 0.00 3.18
3513 3758 3.251004 GTGGTGATTTCAGAGGTGTTCAC 59.749 47.826 0.00 0.00 32.84 3.18
3514 3759 2.814336 GGTGATTTCAGAGGTGTTCACC 59.186 50.000 13.45 13.45 39.64 4.02
3580 3825 3.540314 ATTTACAGGCAGCTCTGAGAG 57.460 47.619 9.28 4.80 38.11 3.20
3602 3847 7.108847 AGAGTTCAAGATAGATTTCCCACAAG 58.891 38.462 0.00 0.00 0.00 3.16
3605 3850 6.373005 TCAAGATAGATTTCCCACAAGTGA 57.627 37.500 0.94 0.00 0.00 3.41
3625 3870 0.106769 TGAATACCACCATGGCGCAT 60.107 50.000 13.04 0.00 42.67 4.73
3680 3932 3.376546 GGCAGGAACTCTAGCATTTTCTG 59.623 47.826 0.00 3.03 34.60 3.02
3698 3952 5.772825 TTCTGCTTGTTGCTTTTGTAGAT 57.227 34.783 0.00 0.00 43.37 1.98
3699 3953 6.875948 TTCTGCTTGTTGCTTTTGTAGATA 57.124 33.333 0.00 0.00 43.37 1.98
3700 3954 6.875948 TCTGCTTGTTGCTTTTGTAGATAA 57.124 33.333 0.00 0.00 43.37 1.75
3701 3955 6.902341 TCTGCTTGTTGCTTTTGTAGATAAG 58.098 36.000 0.00 0.00 43.37 1.73
3704 3958 7.885297 TGCTTGTTGCTTTTGTAGATAAGAAT 58.115 30.769 0.00 0.00 43.37 2.40
3724 3978 5.757320 AGAATTGTGCCAGATAGATTTCGAG 59.243 40.000 0.00 0.00 0.00 4.04
3728 3982 2.949644 TGCCAGATAGATTTCGAGACGA 59.050 45.455 0.00 0.00 0.00 4.20
3729 3983 3.243101 TGCCAGATAGATTTCGAGACGAC 60.243 47.826 0.00 0.00 34.89 4.34
3731 3985 4.283678 CCAGATAGATTTCGAGACGACAC 58.716 47.826 0.00 0.00 34.89 3.67
3746 4000 3.211803 CGACACACGGAACAGAGATAA 57.788 47.619 0.00 0.00 38.46 1.75
3748 4002 3.512680 GACACACGGAACAGAGATAAGG 58.487 50.000 0.00 0.00 0.00 2.69
3789 4043 5.047872 TGAATCTGCACATTGCTGTACAAAT 60.048 36.000 0.00 0.00 45.31 2.32
3794 4048 5.114780 TGCACATTGCTGTACAAATTTTGT 58.885 33.333 18.13 18.13 45.31 2.83
3798 4052 7.518689 GCACATTGCTGTACAAATTTTGTGATT 60.519 33.333 22.04 0.70 43.51 2.57
3799 4053 8.336806 CACATTGCTGTACAAATTTTGTGATTT 58.663 29.630 22.04 0.35 43.51 2.17
3800 4054 8.891720 ACATTGCTGTACAAATTTTGTGATTTT 58.108 25.926 22.04 0.00 45.03 1.82
3803 4057 8.932945 TGCTGTACAAATTTTGTGATTTTACA 57.067 26.923 22.04 15.93 45.03 2.41
3804 4058 9.539825 TGCTGTACAAATTTTGTGATTTTACAT 57.460 25.926 22.04 0.00 45.03 2.29
3810 4064 9.705290 ACAAATTTTGTGATTTTACATACTCCC 57.295 29.630 13.80 0.00 43.48 4.30
3811 4065 9.927668 CAAATTTTGTGATTTTACATACTCCCT 57.072 29.630 0.78 0.00 0.00 4.20
3813 4067 9.533831 AATTTTGTGATTTTACATACTCCCTCT 57.466 29.630 0.00 0.00 0.00 3.69
3815 4069 6.620877 TGTGATTTTACATACTCCCTCTGT 57.379 37.500 0.00 0.00 0.00 3.41
3816 4070 7.016153 TGTGATTTTACATACTCCCTCTGTT 57.984 36.000 0.00 0.00 0.00 3.16
3817 4071 7.103641 TGTGATTTTACATACTCCCTCTGTTC 58.896 38.462 0.00 0.00 0.00 3.18
3818 4072 7.103641 GTGATTTTACATACTCCCTCTGTTCA 58.896 38.462 0.00 0.00 0.00 3.18
3819 4073 7.064728 GTGATTTTACATACTCCCTCTGTTCAC 59.935 40.741 0.00 0.00 0.00 3.18
3820 4074 6.681729 TTTTACATACTCCCTCTGTTCACT 57.318 37.500 0.00 0.00 0.00 3.41
3821 4075 6.681729 TTTACATACTCCCTCTGTTCACTT 57.318 37.500 0.00 0.00 0.00 3.16
3822 4076 6.681729 TTACATACTCCCTCTGTTCACTTT 57.318 37.500 0.00 0.00 0.00 2.66
3823 4077 5.568620 ACATACTCCCTCTGTTCACTTTT 57.431 39.130 0.00 0.00 0.00 2.27
3824 4078 5.308825 ACATACTCCCTCTGTTCACTTTTG 58.691 41.667 0.00 0.00 0.00 2.44
3825 4079 3.933861 ACTCCCTCTGTTCACTTTTGT 57.066 42.857 0.00 0.00 0.00 2.83
3826 4080 6.042781 ACATACTCCCTCTGTTCACTTTTGTA 59.957 38.462 0.00 0.00 0.00 2.41
3827 4081 5.367945 ACTCCCTCTGTTCACTTTTGTAA 57.632 39.130 0.00 0.00 0.00 2.41
3828 4082 5.368989 ACTCCCTCTGTTCACTTTTGTAAG 58.631 41.667 0.00 0.00 37.40 2.34
3829 4083 5.130477 ACTCCCTCTGTTCACTTTTGTAAGA 59.870 40.000 0.00 0.00 35.30 2.10
3830 4084 5.365619 TCCCTCTGTTCACTTTTGTAAGAC 58.634 41.667 0.00 0.00 35.30 3.01
3831 4085 4.211374 CCCTCTGTTCACTTTTGTAAGACG 59.789 45.833 0.00 0.00 35.30 4.18
3832 4086 4.809426 CCTCTGTTCACTTTTGTAAGACGT 59.191 41.667 0.00 0.00 35.30 4.34
3833 4087 5.293569 CCTCTGTTCACTTTTGTAAGACGTT 59.706 40.000 0.00 0.00 35.30 3.99
3834 4088 6.183360 CCTCTGTTCACTTTTGTAAGACGTTT 60.183 38.462 0.00 0.00 35.30 3.60
3835 4089 7.136289 TCTGTTCACTTTTGTAAGACGTTTT 57.864 32.000 0.00 0.00 35.30 2.43
3836 4090 8.254178 TCTGTTCACTTTTGTAAGACGTTTTA 57.746 30.769 0.00 0.00 35.30 1.52
3837 4091 8.385111 TCTGTTCACTTTTGTAAGACGTTTTAG 58.615 33.333 0.00 0.00 35.30 1.85
3838 4092 8.254178 TGTTCACTTTTGTAAGACGTTTTAGA 57.746 30.769 0.00 0.00 35.30 2.10
3839 4093 8.170553 TGTTCACTTTTGTAAGACGTTTTAGAC 58.829 33.333 0.00 0.00 35.30 2.59
3840 4094 7.830940 TCACTTTTGTAAGACGTTTTAGACA 57.169 32.000 0.00 0.00 35.30 3.41
3841 4095 7.902032 TCACTTTTGTAAGACGTTTTAGACAG 58.098 34.615 0.00 0.25 35.30 3.51
3842 4096 6.627671 CACTTTTGTAAGACGTTTTAGACAGC 59.372 38.462 0.00 0.00 35.30 4.40
3843 4097 6.537660 ACTTTTGTAAGACGTTTTAGACAGCT 59.462 34.615 0.00 0.00 35.30 4.24
3844 4098 5.900339 TTGTAAGACGTTTTAGACAGCTG 57.100 39.130 13.48 13.48 0.00 4.24
3845 4099 5.190992 TGTAAGACGTTTTAGACAGCTGA 57.809 39.130 23.35 0.00 0.00 4.26
3846 4100 5.593968 TGTAAGACGTTTTAGACAGCTGAA 58.406 37.500 23.35 0.48 0.00 3.02
3847 4101 6.044046 TGTAAGACGTTTTAGACAGCTGAAA 58.956 36.000 23.35 7.93 0.00 2.69
3848 4102 6.704493 TGTAAGACGTTTTAGACAGCTGAAAT 59.296 34.615 23.35 8.03 33.03 2.17
3849 4103 6.619801 AAGACGTTTTAGACAGCTGAAATT 57.380 33.333 23.35 0.00 33.03 1.82
3850 4104 5.990408 AGACGTTTTAGACAGCTGAAATTG 58.010 37.500 23.35 9.51 33.03 2.32
3851 4105 5.758296 AGACGTTTTAGACAGCTGAAATTGA 59.242 36.000 23.35 0.00 33.03 2.57
3852 4106 6.260050 AGACGTTTTAGACAGCTGAAATTGAA 59.740 34.615 23.35 4.96 33.03 2.69
3853 4107 6.970484 ACGTTTTAGACAGCTGAAATTGAAT 58.030 32.000 23.35 0.00 33.03 2.57
3854 4108 7.425606 ACGTTTTAGACAGCTGAAATTGAATT 58.574 30.769 23.35 0.00 33.03 2.17
3855 4109 7.379529 ACGTTTTAGACAGCTGAAATTGAATTG 59.620 33.333 23.35 3.99 33.03 2.32
3856 4110 7.379529 CGTTTTAGACAGCTGAAATTGAATTGT 59.620 33.333 23.35 0.00 33.03 2.71
3857 4111 9.034544 GTTTTAGACAGCTGAAATTGAATTGTT 57.965 29.630 23.35 0.00 33.03 2.83
3858 4112 9.598517 TTTTAGACAGCTGAAATTGAATTGTTT 57.401 25.926 23.35 0.00 0.00 2.83
3859 4113 9.598517 TTTAGACAGCTGAAATTGAATTGTTTT 57.401 25.926 23.35 0.00 0.00 2.43
3861 4115 8.807667 AGACAGCTGAAATTGAATTGTTTTAG 57.192 30.769 23.35 0.00 0.00 1.85
3862 4116 7.869429 AGACAGCTGAAATTGAATTGTTTTAGG 59.131 33.333 23.35 0.00 0.00 2.69
3863 4117 7.500141 ACAGCTGAAATTGAATTGTTTTAGGT 58.500 30.769 23.35 0.00 33.67 3.08
3864 4118 7.439056 ACAGCTGAAATTGAATTGTTTTAGGTG 59.561 33.333 23.35 19.03 46.19 4.00
3865 4119 7.439056 CAGCTGAAATTGAATTGTTTTAGGTGT 59.561 33.333 8.42 0.00 40.99 4.16
3866 4120 7.986889 AGCTGAAATTGAATTGTTTTAGGTGTT 59.013 29.630 0.00 0.00 32.66 3.32
3867 4121 8.063630 GCTGAAATTGAATTGTTTTAGGTGTTG 58.936 33.333 0.00 0.00 0.00 3.33
3868 4122 9.097257 CTGAAATTGAATTGTTTTAGGTGTTGT 57.903 29.630 0.00 0.00 0.00 3.32
3869 4123 9.092876 TGAAATTGAATTGTTTTAGGTGTTGTC 57.907 29.630 0.00 0.00 0.00 3.18
3870 4124 9.313118 GAAATTGAATTGTTTTAGGTGTTGTCT 57.687 29.630 0.00 0.00 0.00 3.41
3871 4125 9.665719 AAATTGAATTGTTTTAGGTGTTGTCTT 57.334 25.926 0.00 0.00 0.00 3.01
3878 4132 9.744468 ATTGTTTTAGGTGTTGTCTTAAATGTC 57.256 29.630 0.00 0.00 0.00 3.06
3879 4133 8.514330 TGTTTTAGGTGTTGTCTTAAATGTCT 57.486 30.769 0.00 0.00 0.00 3.41
3880 4134 9.616156 TGTTTTAGGTGTTGTCTTAAATGTCTA 57.384 29.630 0.00 0.00 0.00 2.59
3885 4139 7.636326 AGGTGTTGTCTTAAATGTCTAAAACG 58.364 34.615 0.00 0.00 0.00 3.60
3886 4140 7.281549 AGGTGTTGTCTTAAATGTCTAAAACGT 59.718 33.333 0.00 0.00 0.00 3.99
3887 4141 7.585210 GGTGTTGTCTTAAATGTCTAAAACGTC 59.415 37.037 0.00 0.00 0.00 4.34
3888 4142 8.333186 GTGTTGTCTTAAATGTCTAAAACGTCT 58.667 33.333 0.00 0.00 0.00 4.18
3889 4143 8.885722 TGTTGTCTTAAATGTCTAAAACGTCTT 58.114 29.630 0.00 0.00 0.00 3.01
3892 4146 9.531942 TGTCTTAAATGTCTAAAACGTCTTACA 57.468 29.630 0.00 0.00 0.00 2.41
3898 4152 9.498307 AAATGTCTAAAACGTCTTACAAAAGTG 57.502 29.630 0.00 0.00 34.13 3.16
3899 4153 7.830940 TGTCTAAAACGTCTTACAAAAGTGA 57.169 32.000 0.00 0.00 34.13 3.41
3900 4154 8.254178 TGTCTAAAACGTCTTACAAAAGTGAA 57.746 30.769 0.00 0.00 34.13 3.18
3901 4155 8.170553 TGTCTAAAACGTCTTACAAAAGTGAAC 58.829 33.333 0.00 0.00 34.13 3.18
3902 4156 7.637519 GTCTAAAACGTCTTACAAAAGTGAACC 59.362 37.037 0.00 0.00 34.13 3.62
3903 4157 4.525411 AACGTCTTACAAAAGTGAACCG 57.475 40.909 0.00 0.00 34.13 4.44
3904 4158 3.784338 ACGTCTTACAAAAGTGAACCGA 58.216 40.909 0.00 0.00 34.13 4.69
3905 4159 3.800506 ACGTCTTACAAAAGTGAACCGAG 59.199 43.478 0.00 0.00 34.13 4.63
3906 4160 3.183775 CGTCTTACAAAAGTGAACCGAGG 59.816 47.826 0.00 0.00 34.13 4.63
3907 4161 3.497262 GTCTTACAAAAGTGAACCGAGGG 59.503 47.826 0.00 0.00 34.13 4.30
3908 4162 3.388676 TCTTACAAAAGTGAACCGAGGGA 59.611 43.478 0.00 0.00 34.13 4.20
3909 4163 2.256117 ACAAAAGTGAACCGAGGGAG 57.744 50.000 0.00 0.00 0.00 4.30
3910 4164 1.489230 ACAAAAGTGAACCGAGGGAGT 59.511 47.619 0.00 0.00 0.00 3.85
3911 4165 2.701951 ACAAAAGTGAACCGAGGGAGTA 59.298 45.455 0.00 0.00 0.00 2.59
3912 4166 3.244112 ACAAAAGTGAACCGAGGGAGTAG 60.244 47.826 0.00 0.00 0.00 2.57
3913 4167 0.896226 AAGTGAACCGAGGGAGTAGC 59.104 55.000 0.00 0.00 0.00 3.58
3914 4168 0.251653 AGTGAACCGAGGGAGTAGCA 60.252 55.000 0.00 0.00 0.00 3.49
3915 4169 0.173708 GTGAACCGAGGGAGTAGCAG 59.826 60.000 0.00 0.00 0.00 4.24
3916 4170 0.039180 TGAACCGAGGGAGTAGCAGA 59.961 55.000 0.00 0.00 0.00 4.26
3917 4171 1.342076 TGAACCGAGGGAGTAGCAGAT 60.342 52.381 0.00 0.00 0.00 2.90
3918 4172 2.092049 TGAACCGAGGGAGTAGCAGATA 60.092 50.000 0.00 0.00 0.00 1.98
3919 4173 2.750141 ACCGAGGGAGTAGCAGATAA 57.250 50.000 0.00 0.00 0.00 1.75
3920 4174 2.588620 ACCGAGGGAGTAGCAGATAAG 58.411 52.381 0.00 0.00 0.00 1.73
3921 4175 1.889829 CCGAGGGAGTAGCAGATAAGG 59.110 57.143 0.00 0.00 0.00 2.69
3922 4176 2.588620 CGAGGGAGTAGCAGATAAGGT 58.411 52.381 0.00 0.00 0.00 3.50
3923 4177 2.959707 CGAGGGAGTAGCAGATAAGGTT 59.040 50.000 0.00 0.00 0.00 3.50
3924 4178 3.243569 CGAGGGAGTAGCAGATAAGGTTG 60.244 52.174 0.00 0.00 0.00 3.77
3925 4179 3.041946 AGGGAGTAGCAGATAAGGTTGG 58.958 50.000 0.00 0.00 0.00 3.77
3926 4180 2.104963 GGGAGTAGCAGATAAGGTTGGG 59.895 54.545 0.00 0.00 0.00 4.12
3927 4181 2.485657 GGAGTAGCAGATAAGGTTGGGC 60.486 54.545 0.00 0.00 0.00 5.36
3928 4182 2.170607 GAGTAGCAGATAAGGTTGGGCA 59.829 50.000 0.00 0.00 0.00 5.36
3929 4183 2.780010 AGTAGCAGATAAGGTTGGGCAT 59.220 45.455 0.00 0.00 0.00 4.40
3930 4184 3.973973 AGTAGCAGATAAGGTTGGGCATA 59.026 43.478 0.00 0.00 0.00 3.14
3931 4185 3.498774 AGCAGATAAGGTTGGGCATAG 57.501 47.619 0.00 0.00 0.00 2.23
3932 4186 1.882623 GCAGATAAGGTTGGGCATAGC 59.117 52.381 0.00 0.00 0.00 2.97
3933 4187 2.749466 GCAGATAAGGTTGGGCATAGCA 60.749 50.000 0.00 0.00 0.00 3.49
3934 4188 3.144506 CAGATAAGGTTGGGCATAGCAG 58.855 50.000 0.00 0.00 0.00 4.24
3935 4189 2.780010 AGATAAGGTTGGGCATAGCAGT 59.220 45.455 0.00 0.00 0.00 4.40
3936 4190 3.203040 AGATAAGGTTGGGCATAGCAGTT 59.797 43.478 0.00 0.00 0.00 3.16
3937 4191 4.412199 AGATAAGGTTGGGCATAGCAGTTA 59.588 41.667 0.00 0.00 0.00 2.24
3938 4192 3.669939 AAGGTTGGGCATAGCAGTTAT 57.330 42.857 0.00 0.00 0.00 1.89
3939 4193 2.936202 AGGTTGGGCATAGCAGTTATG 58.064 47.619 0.00 0.00 41.77 1.90
3940 4194 2.509548 AGGTTGGGCATAGCAGTTATGA 59.490 45.455 8.40 0.00 41.45 2.15
3941 4195 3.053693 AGGTTGGGCATAGCAGTTATGAA 60.054 43.478 8.40 0.00 41.45 2.57
3942 4196 3.891366 GGTTGGGCATAGCAGTTATGAAT 59.109 43.478 8.40 0.00 41.45 2.57
3943 4197 4.022849 GGTTGGGCATAGCAGTTATGAATC 60.023 45.833 8.40 0.00 41.45 2.52
3945 4199 4.392047 TGGGCATAGCAGTTATGAATCTG 58.608 43.478 8.40 0.00 41.45 2.90
3970 4224 2.837591 TGGACAAGAATAGCTGCTGGTA 59.162 45.455 13.43 4.92 0.00 3.25
3973 4227 3.866651 ACAAGAATAGCTGCTGGTAGTG 58.133 45.455 13.43 7.59 0.00 2.74
3975 4229 4.020218 ACAAGAATAGCTGCTGGTAGTGAA 60.020 41.667 13.43 0.00 0.00 3.18
3995 4249 8.485976 AGTGAAACAGATTTGTTATAGAGCTC 57.514 34.615 5.27 5.27 46.54 4.09
4015 4269 4.507710 CTCAACAAGCAGAATACTAGGCA 58.492 43.478 0.00 0.00 0.00 4.75
4018 4273 5.586243 TCAACAAGCAGAATACTAGGCATTC 59.414 40.000 10.02 10.02 33.43 2.67
4019 4274 4.455606 ACAAGCAGAATACTAGGCATTCC 58.544 43.478 13.04 3.10 33.67 3.01
4021 4276 2.373502 AGCAGAATACTAGGCATTCCCC 59.626 50.000 13.04 7.02 33.67 4.81
4023 4278 1.978580 AGAATACTAGGCATTCCCCGG 59.021 52.381 13.04 0.00 33.67 5.73
4045 4300 4.370917 GTTTTGTGGCATCAATGTGTCTT 58.629 39.130 0.00 0.00 0.00 3.01
4046 4301 3.921119 TTGTGGCATCAATGTGTCTTC 57.079 42.857 0.00 0.00 0.00 2.87
4051 4306 4.455533 GTGGCATCAATGTGTCTTCAACTA 59.544 41.667 0.00 0.00 0.00 2.24
4052 4307 4.696877 TGGCATCAATGTGTCTTCAACTAG 59.303 41.667 0.00 0.00 0.00 2.57
4053 4308 4.697352 GGCATCAATGTGTCTTCAACTAGT 59.303 41.667 0.00 0.00 0.00 2.57
4054 4309 5.874810 GGCATCAATGTGTCTTCAACTAGTA 59.125 40.000 0.00 0.00 0.00 1.82
4080 4335 6.647334 TCATTTTGACTTCTTGTAATGGCA 57.353 33.333 0.00 0.00 0.00 4.92
4113 4368 5.975693 ACACCGTGTATTTCATTTTCCAT 57.024 34.783 1.18 0.00 0.00 3.41
4137 4392 2.481952 ACGAGTTGCTGCATTCTCTTTC 59.518 45.455 22.93 7.61 0.00 2.62
4145 4401 2.079158 TGCATTCTCTTTCTTCCAGCG 58.921 47.619 0.00 0.00 0.00 5.18
4178 4434 3.492756 GCACGGCAAGATAAAAGCAAAAA 59.507 39.130 0.00 0.00 0.00 1.94
4191 4447 2.183679 AGCAAAAACTTGGACAACCCA 58.816 42.857 0.00 0.00 44.93 4.51
4210 4467 9.362151 ACAACCCAAAAATACAAGAGAAGATAA 57.638 29.630 0.00 0.00 0.00 1.75
4234 4491 2.028130 AGACTCGCCTTAGATGAGTGG 58.972 52.381 10.22 0.00 42.71 4.00
4407 4664 1.891919 GTCCACAAACTGAGCGGCA 60.892 57.895 1.45 0.00 0.00 5.69
4428 4685 3.058708 CAGTTCTTGCTCGCAATTCTTCA 60.059 43.478 4.63 0.00 35.20 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.204306 TCATTCCAGGATCTGCATCAC 57.796 47.619 0.00 0.00 0.00 3.06
55 56 6.994496 TGAGTAGATGATGGTGAATTGGATTC 59.006 38.462 0.00 0.00 39.70 2.52
62 63 5.061853 GCACATGAGTAGATGATGGTGAAT 58.938 41.667 0.00 0.00 0.00 2.57
96 97 7.524717 ACTGGTGTTATTTTGTTTCTAGCAT 57.475 32.000 0.00 0.00 0.00 3.79
141 142 8.103305 AGTGTCAGTGTGTTTGGATAATATTCT 58.897 33.333 0.00 0.00 0.00 2.40
147 148 5.029807 TCAGTGTCAGTGTGTTTGGATAA 57.970 39.130 7.54 0.00 0.00 1.75
178 179 8.934023 AGTTCATGAAAGGTTCAAATAGGTTA 57.066 30.769 10.35 0.00 43.95 2.85
185 186 6.603201 AGAACTGAGTTCATGAAAGGTTCAAA 59.397 34.615 25.45 1.79 44.11 2.69
192 193 8.545229 ACTATGAAGAACTGAGTTCATGAAAG 57.455 34.615 25.45 17.98 44.11 2.62
229 230 5.458041 TCATATTCGAGCACATCATCTGA 57.542 39.130 0.00 0.00 0.00 3.27
240 241 6.253298 GCTTACATGAGAGATCATATTCGAGC 59.747 42.308 0.00 0.00 0.00 5.03
336 340 6.315091 TCCGATCCGTTTAATTCAAACAAA 57.685 33.333 9.60 0.00 45.80 2.83
375 379 6.101274 ACTCAACCCTATTTCCTACTCCTA 57.899 41.667 0.00 0.00 0.00 2.94
376 380 4.961585 ACTCAACCCTATTTCCTACTCCT 58.038 43.478 0.00 0.00 0.00 3.69
377 381 5.045797 ACAACTCAACCCTATTTCCTACTCC 60.046 44.000 0.00 0.00 0.00 3.85
378 382 6.051179 ACAACTCAACCCTATTTCCTACTC 57.949 41.667 0.00 0.00 0.00 2.59
379 383 6.272558 AGAACAACTCAACCCTATTTCCTACT 59.727 38.462 0.00 0.00 0.00 2.57
380 384 6.473758 AGAACAACTCAACCCTATTTCCTAC 58.526 40.000 0.00 0.00 0.00 3.18
381 385 6.697641 AGAACAACTCAACCCTATTTCCTA 57.302 37.500 0.00 0.00 0.00 2.94
382 386 5.584551 AGAACAACTCAACCCTATTTCCT 57.415 39.130 0.00 0.00 0.00 3.36
383 387 5.048013 CCAAGAACAACTCAACCCTATTTCC 60.048 44.000 0.00 0.00 0.00 3.13
415 419 1.212935 GCCTTGTGGGATACATCAGGT 59.787 52.381 0.00 0.00 38.84 4.00
500 504 1.586154 GGTCAGTCGTTGCCATTGGG 61.586 60.000 4.53 0.00 37.18 4.12
507 511 2.258726 GGTTGGGGTCAGTCGTTGC 61.259 63.158 0.00 0.00 0.00 4.17
510 514 1.374947 CATGGTTGGGGTCAGTCGT 59.625 57.895 0.00 0.00 0.00 4.34
511 515 0.955428 CACATGGTTGGGGTCAGTCG 60.955 60.000 0.00 0.00 0.00 4.18
512 516 0.110486 ACACATGGTTGGGGTCAGTC 59.890 55.000 0.00 0.00 0.00 3.51
513 517 0.110486 GACACATGGTTGGGGTCAGT 59.890 55.000 0.00 0.00 33.76 3.41
514 518 0.110295 TGACACATGGTTGGGGTCAG 59.890 55.000 0.00 0.00 36.77 3.51
515 519 0.179004 GTGACACATGGTTGGGGTCA 60.179 55.000 0.00 0.00 38.29 4.02
516 520 1.234615 CGTGACACATGGTTGGGGTC 61.235 60.000 6.37 0.00 34.01 4.46
517 521 1.228124 CGTGACACATGGTTGGGGT 60.228 57.895 6.37 0.00 0.00 4.95
518 522 1.072332 TCGTGACACATGGTTGGGG 59.928 57.895 6.37 0.00 0.00 4.96
519 523 0.250295 AGTCGTGACACATGGTTGGG 60.250 55.000 6.37 0.00 0.00 4.12
520 524 1.148310 GAGTCGTGACACATGGTTGG 58.852 55.000 6.37 0.00 0.00 3.77
521 525 2.061773 GAGAGTCGTGACACATGGTTG 58.938 52.381 6.37 0.00 0.00 3.77
522 526 1.686587 TGAGAGTCGTGACACATGGTT 59.313 47.619 6.37 0.00 0.00 3.67
523 527 1.328279 TGAGAGTCGTGACACATGGT 58.672 50.000 6.37 0.00 0.00 3.55
524 528 2.265683 CATGAGAGTCGTGACACATGG 58.734 52.381 18.13 0.00 35.46 3.66
525 529 2.094545 TCCATGAGAGTCGTGACACATG 60.095 50.000 18.57 18.57 35.46 3.21
526 530 2.165234 CTCCATGAGAGTCGTGACACAT 59.835 50.000 6.37 2.79 35.46 3.21
527 531 1.541588 CTCCATGAGAGTCGTGACACA 59.458 52.381 6.37 0.56 35.46 3.72
553 557 2.466846 CATTCTTTTGGCGATCCATGC 58.533 47.619 0.00 0.00 43.05 4.06
554 558 2.689471 TCCATTCTTTTGGCGATCCATG 59.311 45.455 0.00 0.00 43.05 3.66
555 559 3.017048 TCCATTCTTTTGGCGATCCAT 57.983 42.857 0.00 0.00 43.05 3.41
556 560 2.505650 TCCATTCTTTTGGCGATCCA 57.494 45.000 0.00 0.00 41.55 3.41
557 561 4.114794 CAATTCCATTCTTTTGGCGATCC 58.885 43.478 0.00 0.00 36.66 3.36
558 562 4.114794 CCAATTCCATTCTTTTGGCGATC 58.885 43.478 0.00 0.00 36.66 3.69
560 564 2.896685 ACCAATTCCATTCTTTTGGCGA 59.103 40.909 0.62 0.00 41.89 5.54
561 565 3.253230 GACCAATTCCATTCTTTTGGCG 58.747 45.455 0.62 0.00 41.89 5.69
562 566 4.021192 TCTGACCAATTCCATTCTTTTGGC 60.021 41.667 0.62 0.00 41.89 4.52
563 567 5.717119 CTCTGACCAATTCCATTCTTTTGG 58.283 41.667 0.00 0.00 43.41 3.28
564 568 5.166398 GCTCTGACCAATTCCATTCTTTTG 58.834 41.667 0.00 0.00 0.00 2.44
676 686 3.665585 GCTGCGAGTCTGCTAAAAAGTTC 60.666 47.826 8.13 0.00 36.79 3.01
680 690 1.800586 CAGCTGCGAGTCTGCTAAAAA 59.199 47.619 0.00 0.00 46.42 1.94
693 703 0.318869 TTTTGCATTGACCAGCTGCG 60.319 50.000 8.66 4.27 38.75 5.18
699 709 6.820656 ACAACTTTGTAATTTTGCATTGACCA 59.179 30.769 0.00 0.00 40.16 4.02
739 749 7.354025 TGAATTTTTCTTCGTTATGTCGCTA 57.646 32.000 0.00 0.00 0.00 4.26
765 775 9.260002 GCAAATTGGAGTCTAAAAATTCAAAGA 57.740 29.630 0.00 0.00 0.00 2.52
811 821 6.170506 GGAGAATAAAAACATTTTGGGGGAC 58.829 40.000 0.00 0.00 0.00 4.46
961 973 3.466395 AGTCTAACTCTGCTTCCTCCT 57.534 47.619 0.00 0.00 0.00 3.69
962 974 4.951094 TCTAAGTCTAACTCTGCTTCCTCC 59.049 45.833 0.00 0.00 0.00 4.30
975 987 2.237143 TCTCGGTCCGGTCTAAGTCTAA 59.763 50.000 12.29 0.00 0.00 2.10
976 988 1.833630 TCTCGGTCCGGTCTAAGTCTA 59.166 52.381 12.29 0.00 0.00 2.59
977 989 0.617413 TCTCGGTCCGGTCTAAGTCT 59.383 55.000 12.29 0.00 0.00 3.24
978 990 1.015868 CTCTCGGTCCGGTCTAAGTC 58.984 60.000 12.29 0.00 0.00 3.01
979 991 0.394080 CCTCTCGGTCCGGTCTAAGT 60.394 60.000 12.29 0.00 0.00 2.24
980 992 1.726533 GCCTCTCGGTCCGGTCTAAG 61.727 65.000 12.29 0.47 0.00 2.18
981 993 1.751927 GCCTCTCGGTCCGGTCTAA 60.752 63.158 12.29 0.00 0.00 2.10
1023 1035 2.038975 AGCCTACCCCTCTTCGCA 59.961 61.111 0.00 0.00 0.00 5.10
1025 1037 3.121019 CGAGCCTACCCCTCTTCG 58.879 66.667 0.00 0.00 0.00 3.79
1092 1104 1.374252 CTTCTCCACCACGAACCGG 60.374 63.158 0.00 0.00 0.00 5.28
1296 1308 3.249189 TCCACCAGGAGCACCACC 61.249 66.667 2.07 0.00 39.61 4.61
2104 2224 3.461773 CTGCCCGACCTGGACGAT 61.462 66.667 19.67 0.00 42.00 3.73
2185 2305 0.778815 CCAAGCTCGATCGTATTCGC 59.221 55.000 15.94 10.82 38.97 4.70
2191 2311 2.125512 GCCACCAAGCTCGATCGT 60.126 61.111 15.94 0.00 0.00 3.73
2194 2314 0.107945 GAGAAGCCACCAAGCTCGAT 60.108 55.000 0.00 0.00 44.11 3.59
2223 2343 3.814842 TCAGACAAATTCAGCAATCGTGT 59.185 39.130 0.00 0.00 0.00 4.49
2224 2344 4.408993 TCAGACAAATTCAGCAATCGTG 57.591 40.909 0.00 0.00 0.00 4.35
2225 2345 5.437289 TTTCAGACAAATTCAGCAATCGT 57.563 34.783 0.00 0.00 0.00 3.73
2369 2504 5.156355 CAAGTGTGATGAGGTTGTAAATGC 58.844 41.667 0.00 0.00 0.00 3.56
2382 2518 3.316029 TCAGGAAAACAGCAAGTGTGATG 59.684 43.478 0.00 0.00 46.85 3.07
2387 2523 2.549754 ACGATCAGGAAAACAGCAAGTG 59.450 45.455 0.00 0.00 0.00 3.16
2389 2525 2.095567 CCACGATCAGGAAAACAGCAAG 60.096 50.000 0.00 0.00 0.00 4.01
2390 2526 1.879380 CCACGATCAGGAAAACAGCAA 59.121 47.619 0.00 0.00 0.00 3.91
2391 2527 1.071542 TCCACGATCAGGAAAACAGCA 59.928 47.619 1.53 0.00 30.71 4.41
2404 2547 2.609459 GTGAAATGAAGCGATCCACGAT 59.391 45.455 0.00 0.00 45.77 3.73
2405 2548 1.999735 GTGAAATGAAGCGATCCACGA 59.000 47.619 0.00 0.00 45.77 4.35
2406 2549 2.002586 AGTGAAATGAAGCGATCCACG 58.997 47.619 0.00 0.00 45.66 4.94
2409 2552 4.154918 AGAAACAGTGAAATGAAGCGATCC 59.845 41.667 0.00 0.00 0.00 3.36
2427 2570 5.591643 TCGATTTAGCAGTGAACAGAAAC 57.408 39.130 0.00 0.00 0.00 2.78
2428 2571 5.931724 TGATCGATTTAGCAGTGAACAGAAA 59.068 36.000 0.00 0.00 0.00 2.52
2434 2577 6.741992 ATTTGTGATCGATTTAGCAGTGAA 57.258 33.333 0.00 0.00 0.00 3.18
2445 2588 4.813161 AGAGATTGCGAATTTGTGATCGAT 59.187 37.500 0.00 0.00 41.43 3.59
2447 2590 4.526970 AGAGATTGCGAATTTGTGATCG 57.473 40.909 0.00 0.00 41.81 3.69
2448 2591 5.232202 TCGTAGAGATTGCGAATTTGTGATC 59.768 40.000 0.00 0.00 41.02 2.92
2449 2592 5.109210 TCGTAGAGATTGCGAATTTGTGAT 58.891 37.500 0.00 0.00 41.02 3.06
2450 2593 4.490743 TCGTAGAGATTGCGAATTTGTGA 58.509 39.130 0.00 0.00 41.02 3.58
2451 2594 4.840401 TCGTAGAGATTGCGAATTTGTG 57.160 40.909 0.00 0.00 41.02 3.33
2458 2601 9.694018 TCTGCAAGTAAATCGTAGAGATTGCGA 62.694 40.741 0.00 0.00 41.32 5.10
2459 2602 7.652508 TCTGCAAGTAAATCGTAGAGATTGCG 61.653 42.308 0.00 0.00 41.32 4.85
2460 2603 5.520288 TCTGCAAGTAAATCGTAGAGATTGC 59.480 40.000 0.00 0.00 41.32 3.56
2461 2604 7.706281 ATCTGCAAGTAAATCGTAGAGATTG 57.294 36.000 0.00 0.00 41.32 2.67
2462 2605 9.416794 CATATCTGCAAGTAAATCGTAGAGATT 57.583 33.333 0.00 0.00 42.92 2.40
2467 2610 7.327275 GTCTCCATATCTGCAAGTAAATCGTAG 59.673 40.741 0.00 0.00 33.76 3.51
2474 2617 3.958147 TCCGTCTCCATATCTGCAAGTAA 59.042 43.478 0.00 0.00 33.76 2.24
2476 2619 2.101582 GTCCGTCTCCATATCTGCAAGT 59.898 50.000 0.00 0.00 33.76 3.16
2477 2620 2.748605 GTCCGTCTCCATATCTGCAAG 58.251 52.381 0.00 0.00 0.00 4.01
2485 2629 1.381928 GGCACTCGTCCGTCTCCATA 61.382 60.000 0.00 0.00 0.00 2.74
2524 2668 2.087501 TAGTCTTTTCATCGCGCCAA 57.912 45.000 0.00 0.00 0.00 4.52
2533 2677 3.071479 GGCGGTGATGTTAGTCTTTTCA 58.929 45.455 0.00 0.00 0.00 2.69
2536 2680 2.699954 CAGGCGGTGATGTTAGTCTTT 58.300 47.619 0.00 0.00 0.00 2.52
2542 2686 0.676466 CCTTGCAGGCGGTGATGTTA 60.676 55.000 0.00 0.00 0.00 2.41
2564 2708 7.155328 ACTATGAATGTCGGATTGGAAGATAC 58.845 38.462 0.00 0.00 0.00 2.24
2565 2709 7.303182 ACTATGAATGTCGGATTGGAAGATA 57.697 36.000 0.00 0.00 0.00 1.98
2566 2710 6.179906 ACTATGAATGTCGGATTGGAAGAT 57.820 37.500 0.00 0.00 0.00 2.40
2568 2712 5.817296 TGAACTATGAATGTCGGATTGGAAG 59.183 40.000 0.00 0.00 0.00 3.46
2570 2714 5.128663 TCTGAACTATGAATGTCGGATTGGA 59.871 40.000 0.00 0.00 0.00 3.53
2571 2715 5.235186 GTCTGAACTATGAATGTCGGATTGG 59.765 44.000 0.00 0.00 0.00 3.16
2580 2776 8.260270 TGTTTCATCTGTCTGAACTATGAATG 57.740 34.615 9.32 0.00 37.83 2.67
2586 2782 6.483307 CCTTGTTGTTTCATCTGTCTGAACTA 59.517 38.462 0.00 0.00 34.96 2.24
2588 2784 5.296780 TCCTTGTTGTTTCATCTGTCTGAAC 59.703 40.000 0.00 0.00 34.96 3.18
2589 2785 5.436175 TCCTTGTTGTTTCATCTGTCTGAA 58.564 37.500 0.00 0.00 33.42 3.02
2590 2786 5.034852 TCCTTGTTGTTTCATCTGTCTGA 57.965 39.130 0.00 0.00 0.00 3.27
2592 2788 5.041191 ACTCCTTGTTGTTTCATCTGTCT 57.959 39.130 0.00 0.00 0.00 3.41
2593 2789 5.107453 CGTACTCCTTGTTGTTTCATCTGTC 60.107 44.000 0.00 0.00 0.00 3.51
2594 2790 4.750098 CGTACTCCTTGTTGTTTCATCTGT 59.250 41.667 0.00 0.00 0.00 3.41
2597 2793 6.481954 AATCGTACTCCTTGTTGTTTCATC 57.518 37.500 0.00 0.00 0.00 2.92
2598 2794 6.347402 CGAAATCGTACTCCTTGTTGTTTCAT 60.347 38.462 0.00 0.00 34.11 2.57
2599 2795 5.050634 CGAAATCGTACTCCTTGTTGTTTCA 60.051 40.000 0.00 0.00 34.11 2.69
2600 2796 5.176223 TCGAAATCGTACTCCTTGTTGTTTC 59.824 40.000 2.41 0.00 40.80 2.78
2604 2800 4.446385 TGTTCGAAATCGTACTCCTTGTTG 59.554 41.667 12.61 0.00 39.77 3.33
2605 2801 4.446719 GTGTTCGAAATCGTACTCCTTGTT 59.553 41.667 12.61 0.00 39.77 2.83
2606 2802 3.985925 GTGTTCGAAATCGTACTCCTTGT 59.014 43.478 12.61 0.00 39.77 3.16
2607 2803 3.059044 CGTGTTCGAAATCGTACTCCTTG 59.941 47.826 12.61 0.00 39.77 3.61
2609 2805 2.227388 ACGTGTTCGAAATCGTACTCCT 59.773 45.455 21.41 2.71 39.77 3.69
2610 2806 2.589014 ACGTGTTCGAAATCGTACTCC 58.411 47.619 21.41 0.00 39.77 3.85
2612 2808 3.374745 ACAACGTGTTCGAAATCGTACT 58.625 40.909 22.48 10.51 39.77 2.73
2613 2809 3.758521 ACAACGTGTTCGAAATCGTAC 57.241 42.857 22.48 5.74 39.56 3.67
2614 2810 6.249050 CAGTATACAACGTGTTCGAAATCGTA 59.751 38.462 22.48 12.19 40.80 3.43
2615 2811 5.060077 CAGTATACAACGTGTTCGAAATCGT 59.940 40.000 18.56 18.56 40.80 3.73
2616 2812 5.469387 CAGTATACAACGTGTTCGAAATCG 58.531 41.667 17.50 17.50 40.62 3.34
2617 2813 5.164031 TGCAGTATACAACGTGTTCGAAATC 60.164 40.000 0.00 0.00 40.62 2.17
2618 2814 4.687018 TGCAGTATACAACGTGTTCGAAAT 59.313 37.500 0.00 0.00 40.62 2.17
2619 2815 4.049869 TGCAGTATACAACGTGTTCGAAA 58.950 39.130 0.00 0.00 40.62 3.46
2620 2816 3.640592 TGCAGTATACAACGTGTTCGAA 58.359 40.909 5.50 0.00 40.62 3.71
2622 2818 2.344441 CCTGCAGTATACAACGTGTTCG 59.656 50.000 13.81 0.00 43.34 3.95
2624 2820 3.243941 TGTCCTGCAGTATACAACGTGTT 60.244 43.478 13.81 0.00 0.00 3.32
2625 2821 2.297880 TGTCCTGCAGTATACAACGTGT 59.702 45.455 13.81 0.00 0.00 4.49
2626 2822 2.666508 GTGTCCTGCAGTATACAACGTG 59.333 50.000 13.81 0.00 0.00 4.49
2627 2823 2.670229 CGTGTCCTGCAGTATACAACGT 60.670 50.000 13.81 0.00 0.00 3.99
2628 2824 1.917955 CGTGTCCTGCAGTATACAACG 59.082 52.381 13.81 14.48 0.00 4.10
2630 2826 3.506844 TGTACGTGTCCTGCAGTATACAA 59.493 43.478 13.81 0.00 0.00 2.41
2631 2827 3.083293 TGTACGTGTCCTGCAGTATACA 58.917 45.455 13.81 11.06 0.00 2.29
2632 2828 3.488721 CCTGTACGTGTCCTGCAGTATAC 60.489 52.174 13.81 4.33 0.00 1.47
2633 2829 2.686405 CCTGTACGTGTCCTGCAGTATA 59.314 50.000 13.81 0.00 0.00 1.47
2634 2830 1.476891 CCTGTACGTGTCCTGCAGTAT 59.523 52.381 13.81 0.00 0.00 2.12
2635 2831 0.885879 CCTGTACGTGTCCTGCAGTA 59.114 55.000 13.81 0.00 0.00 2.74
2657 2853 4.643387 GGGCACTCGCACACCCTT 62.643 66.667 0.00 0.00 43.03 3.95
2690 2886 2.125673 CCGTTGCCCTCGTACTGG 60.126 66.667 0.00 0.00 0.00 4.00
2886 3082 1.336887 GGCGAACTAGTGAGCAAGTCA 60.337 52.381 20.07 0.00 0.00 3.41
2887 3083 1.067495 AGGCGAACTAGTGAGCAAGTC 60.067 52.381 20.07 6.85 0.00 3.01
2891 3087 1.506718 CGAGGCGAACTAGTGAGCA 59.493 57.895 20.07 0.00 0.00 4.26
2897 3093 2.413765 GAGGCCGAGGCGAACTAG 59.586 66.667 8.14 0.00 43.06 2.57
2899 3095 4.070552 GTGAGGCCGAGGCGAACT 62.071 66.667 8.14 0.00 43.06 3.01
2909 3105 4.783621 TGCAGATGCGGTGAGGCC 62.784 66.667 0.00 0.00 45.83 5.19
2910 3106 1.660560 AATTGCAGATGCGGTGAGGC 61.661 55.000 0.00 0.00 45.83 4.70
2911 3107 0.813184 AAATTGCAGATGCGGTGAGG 59.187 50.000 0.00 0.00 45.83 3.86
2912 3108 1.741706 AGAAATTGCAGATGCGGTGAG 59.258 47.619 0.00 0.00 45.83 3.51
2913 3109 1.469703 CAGAAATTGCAGATGCGGTGA 59.530 47.619 0.00 0.00 45.83 4.02
2917 3113 2.905959 TGTCAGAAATTGCAGATGCG 57.094 45.000 0.00 0.00 45.83 4.73
2918 3114 4.143473 CGTTTTGTCAGAAATTGCAGATGC 60.143 41.667 0.00 0.00 42.50 3.91
2919 3115 4.383649 CCGTTTTGTCAGAAATTGCAGATG 59.616 41.667 0.00 0.00 0.00 2.90
2920 3116 4.037923 ACCGTTTTGTCAGAAATTGCAGAT 59.962 37.500 0.00 0.00 0.00 2.90
2921 3117 3.380004 ACCGTTTTGTCAGAAATTGCAGA 59.620 39.130 0.00 0.00 0.00 4.26
2922 3118 3.486841 CACCGTTTTGTCAGAAATTGCAG 59.513 43.478 0.00 0.00 0.00 4.41
2924 3120 3.242712 CACACCGTTTTGTCAGAAATTGC 59.757 43.478 0.00 0.00 0.00 3.56
2925 3121 4.420168 ACACACCGTTTTGTCAGAAATTG 58.580 39.130 0.00 0.00 0.00 2.32
2926 3122 4.712122 ACACACCGTTTTGTCAGAAATT 57.288 36.364 0.00 0.00 0.00 1.82
2927 3123 4.398044 AGAACACACCGTTTTGTCAGAAAT 59.602 37.500 0.00 0.00 38.19 2.17
2928 3124 3.754323 AGAACACACCGTTTTGTCAGAAA 59.246 39.130 0.00 0.00 38.19 2.52
2930 3126 2.933906 GAGAACACACCGTTTTGTCAGA 59.066 45.455 0.00 0.00 38.19 3.27
2931 3127 2.285602 CGAGAACACACCGTTTTGTCAG 60.286 50.000 0.00 0.00 38.19 3.51
2932 3128 1.661617 CGAGAACACACCGTTTTGTCA 59.338 47.619 0.00 0.00 38.19 3.58
2934 3130 1.395608 CACGAGAACACACCGTTTTGT 59.604 47.619 0.00 0.00 38.19 2.83
2936 3132 1.011333 CCACGAGAACACACCGTTTT 58.989 50.000 0.00 0.00 38.19 2.43
2937 3133 1.433837 GCCACGAGAACACACCGTTT 61.434 55.000 0.00 0.00 38.19 3.60
2938 3134 1.885850 GCCACGAGAACACACCGTT 60.886 57.895 0.00 0.00 41.86 4.44
2939 3135 2.279918 GCCACGAGAACACACCGT 60.280 61.111 0.00 0.00 36.95 4.83
2940 3136 3.041940 GGCCACGAGAACACACCG 61.042 66.667 0.00 0.00 0.00 4.94
2942 3138 1.626654 CGATGGCCACGAGAACACAC 61.627 60.000 8.16 0.00 0.00 3.82
2944 3140 2.740714 GCGATGGCCACGAGAACAC 61.741 63.158 25.37 8.01 0.00 3.32
2947 3143 2.125552 CTGCGATGGCCACGAGAA 60.126 61.111 25.37 7.97 38.85 2.87
2948 3144 3.068064 TCTGCGATGGCCACGAGA 61.068 61.111 25.37 20.65 38.85 4.04
2949 3145 2.887568 GTCTGCGATGGCCACGAG 60.888 66.667 25.37 19.26 38.85 4.18
2950 3146 4.794439 CGTCTGCGATGGCCACGA 62.794 66.667 25.37 12.95 43.45 4.35
2953 3149 4.758251 CCACGTCTGCGATGGCCA 62.758 66.667 8.56 8.56 42.00 5.36
2960 3184 2.801162 CACTCGTCCACGTCTGCG 60.801 66.667 0.00 0.00 44.93 5.18
3058 3282 0.321298 GATGTACACCTGGTTGCCGT 60.321 55.000 0.00 0.00 0.00 5.68
3217 3441 0.608582 AGGCTGCCTCTGCTTTTCAG 60.609 55.000 17.22 0.00 44.21 3.02
3219 3443 2.178856 GAGGCTGCCTCTGCTTTTC 58.821 57.895 35.51 12.54 46.41 2.29
3220 3444 4.412075 GAGGCTGCCTCTGCTTTT 57.588 55.556 35.51 6.99 46.41 2.27
3269 3494 2.508526 AGGAAGATCCAGTGTTTGCAC 58.491 47.619 0.00 0.00 39.61 4.57
3275 3500 1.004044 CAGCCAAGGAAGATCCAGTGT 59.996 52.381 0.00 0.00 39.61 3.55
3287 3512 4.524316 TTCATTTGATTGTCAGCCAAGG 57.476 40.909 0.00 0.00 36.25 3.61
3298 3523 6.347079 CGCTGCAACAGATTTTTCATTTGATT 60.347 34.615 0.00 0.00 32.44 2.57
3301 3526 4.376615 CCGCTGCAACAGATTTTTCATTTG 60.377 41.667 0.00 0.00 32.44 2.32
3316 3545 0.391130 GAGTCCATGTACCGCTGCAA 60.391 55.000 0.00 0.00 0.00 4.08
3375 3604 4.379243 CCGGTCGTGCTCTGGCTT 62.379 66.667 0.00 0.00 39.59 4.35
3438 3667 3.953612 TGACATTCATTCATTACCTGGCC 59.046 43.478 0.00 0.00 0.00 5.36
3458 3694 3.438216 TGATGCCAAAACCAGAGATGA 57.562 42.857 0.00 0.00 0.00 2.92
3462 3703 6.320672 AGAGATTTATGATGCCAAAACCAGAG 59.679 38.462 0.00 0.00 0.00 3.35
3513 3758 8.586570 TTAAATCAAGCAAACAACACTAATGG 57.413 30.769 0.00 0.00 0.00 3.16
3580 3825 6.655003 TCACTTGTGGGAAATCTATCTTGAAC 59.345 38.462 0.64 0.00 0.00 3.18
3602 3847 1.603802 CGCCATGGTGGTATTCATCAC 59.396 52.381 18.06 0.00 39.64 3.06
3605 3850 0.106769 TGCGCCATGGTGGTATTCAT 60.107 50.000 26.23 0.00 40.46 2.57
3625 3870 9.326413 GTAAAGCTATAAGCAACTTCTTCCATA 57.674 33.333 1.22 0.00 45.56 2.74
3629 3874 7.549488 TCAGGTAAAGCTATAAGCAACTTCTTC 59.451 37.037 1.22 0.00 45.56 2.87
3680 3932 8.642020 CAATTCTTATCTACAAAAGCAACAAGC 58.358 33.333 0.00 0.00 46.19 4.01
3698 3952 7.272244 TCGAAATCTATCTGGCACAATTCTTA 58.728 34.615 0.00 0.00 38.70 2.10
3699 3953 6.115446 TCGAAATCTATCTGGCACAATTCTT 58.885 36.000 0.00 0.00 38.70 2.52
3700 3954 5.674525 TCGAAATCTATCTGGCACAATTCT 58.325 37.500 0.00 0.00 38.70 2.40
3701 3955 5.755375 TCTCGAAATCTATCTGGCACAATTC 59.245 40.000 0.00 0.00 38.70 2.17
3704 3958 4.433615 GTCTCGAAATCTATCTGGCACAA 58.566 43.478 0.00 0.00 38.70 3.33
3724 3978 0.309922 TCTCTGTTCCGTGTGTCGTC 59.690 55.000 0.00 0.00 37.94 4.20
3728 3982 2.897969 ACCTTATCTCTGTTCCGTGTGT 59.102 45.455 0.00 0.00 0.00 3.72
3729 3983 3.594603 ACCTTATCTCTGTTCCGTGTG 57.405 47.619 0.00 0.00 0.00 3.82
3731 3985 2.673368 GCAACCTTATCTCTGTTCCGTG 59.327 50.000 0.00 0.00 0.00 4.94
3734 3988 3.674997 TGTGCAACCTTATCTCTGTTCC 58.325 45.455 0.00 0.00 34.36 3.62
3789 4043 7.942341 ACAGAGGGAGTATGTAAAATCACAAAA 59.058 33.333 0.00 0.00 30.84 2.44
3794 4048 7.038302 AGTGAACAGAGGGAGTATGTAAAATCA 60.038 37.037 0.00 0.00 27.65 2.57
3798 4052 6.681729 AAGTGAACAGAGGGAGTATGTAAA 57.318 37.500 0.00 0.00 27.65 2.01
3799 4053 6.681729 AAAGTGAACAGAGGGAGTATGTAA 57.318 37.500 0.00 0.00 27.65 2.41
3800 4054 6.042781 ACAAAAGTGAACAGAGGGAGTATGTA 59.957 38.462 0.00 0.00 27.65 2.29
3801 4055 5.163195 ACAAAAGTGAACAGAGGGAGTATGT 60.163 40.000 0.00 0.00 29.34 2.29
3802 4056 5.308825 ACAAAAGTGAACAGAGGGAGTATG 58.691 41.667 0.00 0.00 0.00 2.39
3803 4057 5.568620 ACAAAAGTGAACAGAGGGAGTAT 57.431 39.130 0.00 0.00 0.00 2.12
3804 4058 6.325545 TCTTACAAAAGTGAACAGAGGGAGTA 59.674 38.462 0.00 0.00 34.13 2.59
3805 4059 3.933861 ACAAAAGTGAACAGAGGGAGT 57.066 42.857 0.00 0.00 0.00 3.85
3806 4060 5.467063 GTCTTACAAAAGTGAACAGAGGGAG 59.533 44.000 0.00 0.00 34.13 4.30
3807 4061 5.365619 GTCTTACAAAAGTGAACAGAGGGA 58.634 41.667 0.00 0.00 34.13 4.20
3808 4062 4.211374 CGTCTTACAAAAGTGAACAGAGGG 59.789 45.833 0.00 0.00 34.13 4.30
3810 4064 5.968387 ACGTCTTACAAAAGTGAACAGAG 57.032 39.130 0.00 0.00 34.13 3.35
3811 4065 6.730960 AAACGTCTTACAAAAGTGAACAGA 57.269 33.333 0.00 0.00 34.13 3.41
3813 4067 8.170553 GTCTAAAACGTCTTACAAAAGTGAACA 58.829 33.333 0.00 0.00 34.13 3.18
3815 4069 8.254178 TGTCTAAAACGTCTTACAAAAGTGAA 57.746 30.769 0.00 0.00 34.13 3.18
3816 4070 7.464977 GCTGTCTAAAACGTCTTACAAAAGTGA 60.465 37.037 0.00 0.00 34.13 3.41
3817 4071 6.627671 GCTGTCTAAAACGTCTTACAAAAGTG 59.372 38.462 0.00 0.00 34.13 3.16
3818 4072 6.537660 AGCTGTCTAAAACGTCTTACAAAAGT 59.462 34.615 0.00 0.00 34.13 2.66
3819 4073 6.846283 CAGCTGTCTAAAACGTCTTACAAAAG 59.154 38.462 5.25 0.00 0.00 2.27
3820 4074 6.535865 TCAGCTGTCTAAAACGTCTTACAAAA 59.464 34.615 14.67 0.00 0.00 2.44
3821 4075 6.044046 TCAGCTGTCTAAAACGTCTTACAAA 58.956 36.000 14.67 0.00 0.00 2.83
3822 4076 5.593968 TCAGCTGTCTAAAACGTCTTACAA 58.406 37.500 14.67 0.00 0.00 2.41
3823 4077 5.190992 TCAGCTGTCTAAAACGTCTTACA 57.809 39.130 14.67 0.00 0.00 2.41
3824 4078 6.520792 TTTCAGCTGTCTAAAACGTCTTAC 57.479 37.500 14.67 0.00 0.00 2.34
3825 4079 7.439955 TCAATTTCAGCTGTCTAAAACGTCTTA 59.560 33.333 14.67 0.00 0.00 2.10
3826 4080 6.260050 TCAATTTCAGCTGTCTAAAACGTCTT 59.740 34.615 14.67 0.00 0.00 3.01
3827 4081 5.758296 TCAATTTCAGCTGTCTAAAACGTCT 59.242 36.000 14.67 0.00 0.00 4.18
3828 4082 5.985781 TCAATTTCAGCTGTCTAAAACGTC 58.014 37.500 14.67 0.00 0.00 4.34
3829 4083 6.371809 TTCAATTTCAGCTGTCTAAAACGT 57.628 33.333 14.67 0.00 0.00 3.99
3830 4084 7.379529 ACAATTCAATTTCAGCTGTCTAAAACG 59.620 33.333 14.67 3.27 0.00 3.60
3831 4085 8.579682 ACAATTCAATTTCAGCTGTCTAAAAC 57.420 30.769 14.67 0.00 0.00 2.43
3832 4086 9.598517 AAACAATTCAATTTCAGCTGTCTAAAA 57.401 25.926 14.67 7.20 0.00 1.52
3833 4087 9.598517 AAAACAATTCAATTTCAGCTGTCTAAA 57.401 25.926 14.67 7.59 0.00 1.85
3835 4089 9.897744 CTAAAACAATTCAATTTCAGCTGTCTA 57.102 29.630 14.67 0.36 0.00 2.59
3836 4090 7.869429 CCTAAAACAATTCAATTTCAGCTGTCT 59.131 33.333 14.67 0.00 0.00 3.41
3837 4091 7.653311 ACCTAAAACAATTCAATTTCAGCTGTC 59.347 33.333 14.67 0.00 0.00 3.51
3838 4092 7.439056 CACCTAAAACAATTCAATTTCAGCTGT 59.561 33.333 14.67 0.00 0.00 4.40
3839 4093 7.439056 ACACCTAAAACAATTCAATTTCAGCTG 59.561 33.333 7.63 7.63 0.00 4.24
3840 4094 7.500141 ACACCTAAAACAATTCAATTTCAGCT 58.500 30.769 0.00 0.00 0.00 4.24
3841 4095 7.713764 ACACCTAAAACAATTCAATTTCAGC 57.286 32.000 0.00 0.00 0.00 4.26
3842 4096 9.097257 ACAACACCTAAAACAATTCAATTTCAG 57.903 29.630 0.00 0.00 0.00 3.02
3843 4097 9.092876 GACAACACCTAAAACAATTCAATTTCA 57.907 29.630 0.00 0.00 0.00 2.69
3844 4098 9.313118 AGACAACACCTAAAACAATTCAATTTC 57.687 29.630 0.00 0.00 0.00 2.17
3845 4099 9.665719 AAGACAACACCTAAAACAATTCAATTT 57.334 25.926 0.00 0.00 0.00 1.82
3852 4106 9.744468 GACATTTAAGACAACACCTAAAACAAT 57.256 29.630 0.00 0.00 0.00 2.71
3853 4107 8.962679 AGACATTTAAGACAACACCTAAAACAA 58.037 29.630 0.00 0.00 0.00 2.83
3854 4108 8.514330 AGACATTTAAGACAACACCTAAAACA 57.486 30.769 0.00 0.00 0.00 2.83
3859 4113 8.767085 CGTTTTAGACATTTAAGACAACACCTA 58.233 33.333 0.00 0.00 0.00 3.08
3860 4114 7.281549 ACGTTTTAGACATTTAAGACAACACCT 59.718 33.333 0.00 0.00 0.00 4.00
3861 4115 7.412063 ACGTTTTAGACATTTAAGACAACACC 58.588 34.615 0.00 0.00 0.00 4.16
3862 4116 8.333186 AGACGTTTTAGACATTTAAGACAACAC 58.667 33.333 0.00 0.00 0.00 3.32
3863 4117 8.428186 AGACGTTTTAGACATTTAAGACAACA 57.572 30.769 0.00 0.00 0.00 3.33
3866 4120 9.531942 TGTAAGACGTTTTAGACATTTAAGACA 57.468 29.630 0.00 0.00 0.00 3.41
3872 4126 9.498307 CACTTTTGTAAGACGTTTTAGACATTT 57.502 29.630 0.00 0.00 35.30 2.32
3873 4127 8.885722 TCACTTTTGTAAGACGTTTTAGACATT 58.114 29.630 0.00 0.00 35.30 2.71
3874 4128 8.428186 TCACTTTTGTAAGACGTTTTAGACAT 57.572 30.769 0.00 0.00 35.30 3.06
3875 4129 7.830940 TCACTTTTGTAAGACGTTTTAGACA 57.169 32.000 0.00 0.00 35.30 3.41
3876 4130 7.637519 GGTTCACTTTTGTAAGACGTTTTAGAC 59.362 37.037 0.00 0.00 35.30 2.59
3877 4131 7.464444 CGGTTCACTTTTGTAAGACGTTTTAGA 60.464 37.037 0.00 0.00 35.30 2.10
3878 4132 6.626095 CGGTTCACTTTTGTAAGACGTTTTAG 59.374 38.462 0.00 0.00 35.30 1.85
3879 4133 6.312426 TCGGTTCACTTTTGTAAGACGTTTTA 59.688 34.615 0.00 0.00 35.30 1.52
3880 4134 5.122082 TCGGTTCACTTTTGTAAGACGTTTT 59.878 36.000 0.00 0.00 35.30 2.43
3881 4135 4.630940 TCGGTTCACTTTTGTAAGACGTTT 59.369 37.500 0.00 0.00 35.30 3.60
3882 4136 4.183101 TCGGTTCACTTTTGTAAGACGTT 58.817 39.130 0.00 0.00 35.30 3.99
3883 4137 3.784338 TCGGTTCACTTTTGTAAGACGT 58.216 40.909 0.00 0.00 35.30 4.34
3884 4138 3.183775 CCTCGGTTCACTTTTGTAAGACG 59.816 47.826 0.00 0.00 35.30 4.18
3885 4139 3.497262 CCCTCGGTTCACTTTTGTAAGAC 59.503 47.826 0.00 0.00 35.30 3.01
3886 4140 3.388676 TCCCTCGGTTCACTTTTGTAAGA 59.611 43.478 0.00 0.00 35.30 2.10
3887 4141 3.735591 TCCCTCGGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
3888 4142 3.135167 ACTCCCTCGGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
3889 4143 2.701951 ACTCCCTCGGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
3890 4144 1.489230 ACTCCCTCGGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
3891 4145 2.256117 ACTCCCTCGGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
3892 4146 2.289506 GCTACTCCCTCGGTTCACTTTT 60.290 50.000 0.00 0.00 0.00 2.27
3893 4147 1.275573 GCTACTCCCTCGGTTCACTTT 59.724 52.381 0.00 0.00 0.00 2.66
3894 4148 0.896226 GCTACTCCCTCGGTTCACTT 59.104 55.000 0.00 0.00 0.00 3.16
3895 4149 0.251653 TGCTACTCCCTCGGTTCACT 60.252 55.000 0.00 0.00 0.00 3.41
3896 4150 0.173708 CTGCTACTCCCTCGGTTCAC 59.826 60.000 0.00 0.00 0.00 3.18
3897 4151 0.039180 TCTGCTACTCCCTCGGTTCA 59.961 55.000 0.00 0.00 0.00 3.18
3898 4152 1.404843 ATCTGCTACTCCCTCGGTTC 58.595 55.000 0.00 0.00 0.00 3.62
3899 4153 2.750141 TATCTGCTACTCCCTCGGTT 57.250 50.000 0.00 0.00 0.00 4.44
3900 4154 2.588620 CTTATCTGCTACTCCCTCGGT 58.411 52.381 0.00 0.00 0.00 4.69
3901 4155 1.889829 CCTTATCTGCTACTCCCTCGG 59.110 57.143 0.00 0.00 0.00 4.63
3902 4156 2.588620 ACCTTATCTGCTACTCCCTCG 58.411 52.381 0.00 0.00 0.00 4.63
3903 4157 3.070302 CCAACCTTATCTGCTACTCCCTC 59.930 52.174 0.00 0.00 0.00 4.30
3904 4158 3.041946 CCAACCTTATCTGCTACTCCCT 58.958 50.000 0.00 0.00 0.00 4.20
3905 4159 2.104963 CCCAACCTTATCTGCTACTCCC 59.895 54.545 0.00 0.00 0.00 4.30
3906 4160 2.485657 GCCCAACCTTATCTGCTACTCC 60.486 54.545 0.00 0.00 0.00 3.85
3907 4161 2.170607 TGCCCAACCTTATCTGCTACTC 59.829 50.000 0.00 0.00 0.00 2.59
3908 4162 2.196595 TGCCCAACCTTATCTGCTACT 58.803 47.619 0.00 0.00 0.00 2.57
3909 4163 2.710096 TGCCCAACCTTATCTGCTAC 57.290 50.000 0.00 0.00 0.00 3.58
3910 4164 3.244561 GCTATGCCCAACCTTATCTGCTA 60.245 47.826 0.00 0.00 0.00 3.49
3911 4165 2.487986 GCTATGCCCAACCTTATCTGCT 60.488 50.000 0.00 0.00 0.00 4.24
3912 4166 1.882623 GCTATGCCCAACCTTATCTGC 59.117 52.381 0.00 0.00 0.00 4.26
3913 4167 3.144506 CTGCTATGCCCAACCTTATCTG 58.855 50.000 0.00 0.00 0.00 2.90
3914 4168 2.780010 ACTGCTATGCCCAACCTTATCT 59.220 45.455 0.00 0.00 0.00 1.98
3915 4169 3.214696 ACTGCTATGCCCAACCTTATC 57.785 47.619 0.00 0.00 0.00 1.75
3916 4170 3.669939 AACTGCTATGCCCAACCTTAT 57.330 42.857 0.00 0.00 0.00 1.73
3917 4171 4.165180 TCATAACTGCTATGCCCAACCTTA 59.835 41.667 0.00 0.00 37.84 2.69
3918 4172 3.053693 TCATAACTGCTATGCCCAACCTT 60.054 43.478 0.00 0.00 37.84 3.50
3919 4173 2.509548 TCATAACTGCTATGCCCAACCT 59.490 45.455 0.00 0.00 37.84 3.50
3920 4174 2.930950 TCATAACTGCTATGCCCAACC 58.069 47.619 0.00 0.00 37.84 3.77
3921 4175 4.823989 AGATTCATAACTGCTATGCCCAAC 59.176 41.667 0.00 0.00 37.84 3.77
3922 4176 4.823442 CAGATTCATAACTGCTATGCCCAA 59.177 41.667 0.00 0.00 37.84 4.12
3923 4177 4.392047 CAGATTCATAACTGCTATGCCCA 58.608 43.478 0.00 0.00 37.84 5.36
3932 4186 4.256110 TGTCCACTGCAGATTCATAACTG 58.744 43.478 23.35 4.31 37.22 3.16
3933 4187 4.558226 TGTCCACTGCAGATTCATAACT 57.442 40.909 23.35 0.00 0.00 2.24
3934 4188 4.937620 TCTTGTCCACTGCAGATTCATAAC 59.062 41.667 23.35 8.70 0.00 1.89
3935 4189 5.164620 TCTTGTCCACTGCAGATTCATAA 57.835 39.130 23.35 7.25 0.00 1.90
3936 4190 4.824479 TCTTGTCCACTGCAGATTCATA 57.176 40.909 23.35 0.34 0.00 2.15
3937 4191 3.708403 TCTTGTCCACTGCAGATTCAT 57.292 42.857 23.35 0.00 0.00 2.57
3938 4192 3.490439 TTCTTGTCCACTGCAGATTCA 57.510 42.857 23.35 10.80 0.00 2.57
3939 4193 4.034975 GCTATTCTTGTCCACTGCAGATTC 59.965 45.833 23.35 8.25 0.00 2.52
3940 4194 3.944015 GCTATTCTTGTCCACTGCAGATT 59.056 43.478 23.35 0.00 0.00 2.40
3941 4195 3.199508 AGCTATTCTTGTCCACTGCAGAT 59.800 43.478 23.35 1.19 0.00 2.90
3942 4196 2.568956 AGCTATTCTTGTCCACTGCAGA 59.431 45.455 23.35 0.00 0.00 4.26
3943 4197 2.676839 CAGCTATTCTTGTCCACTGCAG 59.323 50.000 13.48 13.48 0.00 4.41
3945 4199 1.399791 GCAGCTATTCTTGTCCACTGC 59.600 52.381 0.00 0.00 41.80 4.40
3970 4224 8.097038 TGAGCTCTATAACAAATCTGTTTCACT 58.903 33.333 16.19 0.00 43.45 3.41
3973 4227 8.721478 TGTTGAGCTCTATAACAAATCTGTTTC 58.279 33.333 16.19 0.00 43.45 2.78
3995 4249 5.220931 GGAATGCCTAGTATTCTGCTTGTTG 60.221 44.000 13.50 0.00 35.53 3.33
4015 4269 0.544120 ATGCCACAAAACCGGGGAAT 60.544 50.000 6.32 0.00 0.00 3.01
4018 4273 1.467678 TTGATGCCACAAAACCGGGG 61.468 55.000 6.32 0.00 0.00 5.73
4019 4274 0.607620 ATTGATGCCACAAAACCGGG 59.392 50.000 6.32 0.00 33.44 5.73
4021 4276 2.060284 CACATTGATGCCACAAAACCG 58.940 47.619 0.00 0.00 33.44 4.44
4023 4278 3.981211 AGACACATTGATGCCACAAAAC 58.019 40.909 0.00 0.00 33.44 2.43
4052 4307 9.994432 CCATTACAAGAAGTCAAAATGATCTAC 57.006 33.333 0.00 0.00 0.00 2.59
4053 4308 8.677300 GCCATTACAAGAAGTCAAAATGATCTA 58.323 33.333 0.00 0.00 0.00 1.98
4054 4309 7.177216 TGCCATTACAAGAAGTCAAAATGATCT 59.823 33.333 0.00 0.00 0.00 2.75
4090 4345 5.776173 TGGAAAATGAAATACACGGTGTT 57.224 34.783 20.15 0.62 0.00 3.32
4091 4346 5.975693 ATGGAAAATGAAATACACGGTGT 57.024 34.783 18.89 18.89 0.00 4.16
4095 4350 8.761497 ACTCGTATATGGAAAATGAAATACACG 58.239 33.333 0.00 0.00 29.11 4.49
4113 4368 4.655762 AGAGAATGCAGCAACTCGTATA 57.344 40.909 20.11 0.00 34.98 1.47
4137 4392 2.121564 CTGTGTGTTGGCGCTGGAAG 62.122 60.000 7.64 0.00 0.00 3.46
4145 4401 4.629115 GCCGTGCTGTGTGTTGGC 62.629 66.667 0.00 0.00 35.04 4.52
4210 4467 4.020543 ACTCATCTAAGGCGAGTCTCTTT 58.979 43.478 0.00 0.00 35.02 2.52
4234 4491 8.470002 TGACCATGTAGTATGATATGATAGCAC 58.530 37.037 0.00 0.00 0.00 4.40
4407 4664 3.141398 TGAAGAATTGCGAGCAAGAACT 58.859 40.909 15.90 11.27 39.47 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.